CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046294	Yersinia intermedia strain FDAARGOS_729 chromosome, complete genome	2 crisprs	cas3,WYL,csa3,DinG,DEDDh	0	2	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046294_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046294_1

1668740-1668844

Orphan

Consensus_repeat	Method
GAGACTCATCCTCAAGATGAGACGAATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046294_1

>merge|NZ_CP046294|1|1668740-1668844|CRISPRCasFinder
GAGACTCATCCTCAAGATGAGACGAATACTACTGCGAATGCAGTTTGAACAGCGCCTGCGCTGGCCCCTTTAGGGGGGAGACTCATCCTTAAGATGAGACGAATA

>NZ_CP046294|1|1|1668740-1668844|CRISPRCasFinder
GAGACTCATCCTCAAGATGAGACGAATA	CTACTGCGAATGCAGTTTGAACAGCGCCTGCGCTGGCCCCTTTAGGGGG
GAGACTCATCCTTAAGATGAGACGAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046294.1\|WP_080547920.1\|1669623_1670982_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|236510
NZ_CP046294.1\|WP_032906496.1\|1658789_1659197_-\|Rcs-stress-response-system-protein-RcsF	unknown	unknown	gnl\|CDD\|182725
NZ_CP046294.1\|WP_005185656.1\|1661001_1662033_-\|methionine-ABC-transporter-ATP-binding-protein-MetN	unknown	unknown	gnl\|CDD\|236863
NZ_CP046294.1\|WP_042569242.1\|1659345_1660161_-\|MetQ/NlpA-family-lipoprotein	unknown	unknown	gnl\|CDD\|182939
NZ_CP046294.1\|WP_005189077.1\|1675517_1676612_+\|tRNA/rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|236779
NZ_CP046294.1\|WP_032906497.1\|1658085_1658793_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	unknown	unknown	gnl\|CDD\|224634
NZ_CP046294.1\|WP_042569238.1\|1654427_1654976_+\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|227026
NZ_CP046294.1\|WP_005185663.1\|1656259_1657978_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP046294.1\|WP_005189074.1\|1674867_1675308_-\|thioredoxin-TrxC	unknown	unknown	gnl\|CDD\|182889
NZ_CP046294.1\|WP_005189068.1\|1671156_1673799_-\|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223972
NZ_CP046294.1\|WP_032907086.1\|1680660_1681002_-\|L-valine-transporter-subunit-YgaH	unknown	unknown	gnl\|CDD\|182434
NZ_CP046294.1\|WP_032907082.1\|1669225_1669567_-\|YfiM-family-lipoprotein	unknown	unknown	gnl\|CDD\|182705
NZ_CP046294.1\|WP_005189071.1\|1673956_1674712_-\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|225690
NZ_CP046294.1\|WP_032907085.1\|1679976_1680489_-\|transcriptional-repressor-MprA	unknown	unknown	gnl\|CDD\|182795
NZ_CP046294.1\|WP_042569243.1\|1662219_1662786_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	unknown	unknown	gnl\|CDD\|236354
NZ_CP046294.1\|WP_005189079.1\|1676760_1678293_-\|multidrug-efflux-MFS-transporter-permease-subunit-EmrB	unknown	unknown	gnl\|CDD\|129794
NZ_CP046294.1\|WP_032813821.1\|1660355_1661009_-\|methionine-ABC-transporter-permease-MetI	unknown	unknown	gnl\|CDD\|182726
NZ_CP046294.1\|WP_005189080.1\|1678332_1679508_-\|multidrug-efflux-MFS-transporter-periplasmic-adaptor-subunit-EmrA	unknown	unknown	gnl\|CDD\|185090
NZ_CP046294.1\|WP_005185665.1\|1654978_1655395_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP046294.1\|WP_072103933.1\|1655473_1656181_+\|envelope-stress-response-activation-lipoprotein-NlpE	unknown	unknown	gnl\|CDD\|236708

Protein	Function_ID	Function_description	E-value
NZ_CP046294.1\|WP_080547920.1\|1669623_1670982_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|236510	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase.	0
NZ_CP046294.1\|WP_032906496.1\|1658789_1659197_-\|Rcs-stress-response-system-protein-RcsF	gnl\|CDD\|182725	PRK10781, rcsF, Rcs stress response system protein RcsF.	1.65824e-76
NZ_CP046294.1\|WP_005185656.1\|1661001_1662033_-\|methionine-ABC-transporter-ATP-binding-protein-MetN	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	0
NZ_CP046294.1\|WP_042569242.1\|1659345_1660161_-\|MetQ/NlpA-family-lipoprotein	gnl\|CDD\|182939	PRK11063, metQ, D-methionine ABC transporter substrate-binding protein MetQ.	0
NZ_CP046294.1\|WP_005189077.1\|1675517_1676612_+\|tRNA/rRNA-methyltransferase	gnl\|CDD\|236779	PRK10864, PRK10864, putative methyltransferase; Provisional.	0
NZ_CP046294.1\|WP_032906497.1\|1658085_1658793_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	gnl\|CDD\|224634	COG1720, COG1720, Uncharacterized conserved protein [Function unknown].	4.70929e-71
NZ_CP046294.1\|WP_042569238.1\|1654427_1654976_+\|YaeQ-family-protein	gnl\|CDD\|227026	COG4681, COG4681, Uncharacterized protein conserved in bacteria [Function unknown].	5.90729e-104
NZ_CP046294.1\|WP_005185663.1\|1656259_1657978_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP046294.1\|WP_005189074.1\|1674867_1675308_-\|thioredoxin-TrxC	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	4.22908e-106
NZ_CP046294.1\|WP_005189068.1\|1671156_1673799_-\|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0
NZ_CP046294.1\|WP_032907086.1\|1680660_1681002_-\|L-valine-transporter-subunit-YgaH	gnl\|CDD\|182434	PRK10408, PRK10408, L-valine transporter subunit YgaH.	5.6795e-57
NZ_CP046294.1\|WP_032907082.1\|1669225_1669567_-\|YfiM-family-lipoprotein	gnl\|CDD\|182705	PRK10759, PRK10759, YfiM family lipoprotein.	1.03903e-53
NZ_CP046294.1\|WP_005189071.1\|1673956_1674712_-\|DTW-domain-containing-protein	gnl\|CDD\|225690	COG3148, COG3148, Uncharacterized conserved protein [Function unknown].	2.4291e-113
NZ_CP046294.1\|WP_032907085.1\|1679976_1680489_-\|transcriptional-repressor-MprA	gnl\|CDD\|182795	PRK10870, PRK10870, transcriptional repressor MprA; Provisional.	4.45442e-117
NZ_CP046294.1\|WP_042569243.1\|1662219_1662786_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	gnl\|CDD\|236354	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase.	1.92168e-112
NZ_CP046294.1\|WP_005189079.1\|1676760_1678293_-\|multidrug-efflux-MFS-transporter-permease-subunit-EmrB	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	0
NZ_CP046294.1\|WP_032813821.1\|1660355_1661009_-\|methionine-ABC-transporter-permease-MetI	gnl\|CDD\|182726	PRK10782, PRK10782, D-methionine ABC transporter permease MetI.	2.62271e-139
NZ_CP046294.1\|WP_005189080.1\|1678332_1679508_-\|multidrug-efflux-MFS-transporter-periplasmic-adaptor-subunit-EmrA	gnl\|CDD\|185090	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA.	0
NZ_CP046294.1\|WP_005185665.1\|1654978_1655395_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	5.84929e-76
NZ_CP046294.1\|WP_072103933.1\|1655473_1656181_+\|envelope-stress-response-activation-lipoprotein-NlpE	gnl\|CDD\|236708	PRK10523, PRK10523, envelope stress response activation lipoprotein NlpE.	2.06917e-142

>NZ_CP046294.1|WP_042569243.1|1662219_1662786_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase
MTQPVPAIFLDRDGTINVDHGYVHEIDNFQFIDGVIDACRELKDMGFALVLVTNQSGIARGMFTEEQFVSLTEWMDWSLADRGVDLDGIYFCPHHPDGSVAEFRETCECRKPLPGMLLQAQSELNIDMASSYMVGDKIEDMQAALAANVGTKVLVRTGKPVSAEGEAIADWVLNSLADLPKAIKTHHK
>NZ_CP046294.1|WP_005185656.1|1661001_1662033_-|methionine-ABC-transporter-ATP-binding-protein-MetN
MIKLSHISKVFQQGSRTITALTDVSLHVPAGQIYGVIGASGAGKSTLIRCANMLERPTSGQVLVDGQDLTTLSEGQLTRARRQIGMIFQHFNLLSSRTVYGNIALPLELDNTSRADIKKRVTELLDLVGLADKQDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISEGKLIEKDSVSEVFSHPKTPLAQQFIQSTLHLDIPEDYAQRMTQEPTADRVPLLKLEFTGQSVDAPLISQAVRRFNIDIGILSSQMDYAGGVKFGVMLAELHGDDQDGLAAIKFLQDHHVKVEVLGYV
>NZ_CP046294.1|WP_032813821.1|1660355_1661009_-|methionine-ABC-transporter-permease-MetI
MSEAMMWLMGRGVWETLMMTFVSGFFGFVLGLPVGVLLYVTRPGQIIANNKIYRTLSGVVNIFRSIPFIILLVWMIPFTRMIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQIIKKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQLSGDRIVKAVTHK
>NZ_CP046294.1|WP_042569242.1|1659345_1660161_-|MetQ/NlpA-family-lipoprotein
MSLKFKSIAAVSALIGTLALVGCGPAEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDLNAFQHKPYLDQQIKDRGYKLVSVGNSFVYPIAGYSKKIKSLEELQPGSQVALPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKLVELEAPQLPRSLDDQQIALAIINTTYASQIGLTPAKDGLFVEDKESPYVNLIVAREDNKDAENVKKFVQAYQSDEVYDAANKAFNGGAVKGW
>NZ_CP046294.1|WP_032906496.1|1658789_1659197_-|Rcs-stress-response-system-protein-RcsF
MRALPLCLLALSLTGCSMLQSKPSTTENPVKQPPPVAKPSPTVAPRPAPVKLYKSAEELVGKPFRDLGEVSGESCQSTVQDSPASIATARKRMQTRASYMKANAVLLHGCEIQSGVPGCYQQAVCQGSALNVSSK
>NZ_CP046294.1|WP_032906497.1|1658085_1658793_-|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO
MSVFSFNQIGVIRSPYKEKFAVPRQPGLIEDGGGELQLLAPYNQPEAVRGLSDFSHVWVMFVFHQTMEGGWRPTVRPPRLGGNTRMGVFATRSTFRPNPIGMSLIELKGIRCQGAEVILELGSLDLVDGTPVIDIKPYLPFAESQPLARAGFAQTAPDADMQVCFSAIAEQQLVQQQARYPHLRRFITQVLAQDPRPAYRKDDNESREYAVLLLEFNVRWRVMGQQTEVLSLDPR
>NZ_CP046294.1|WP_005185663.1|1656259_1657978_-|proline--tRNA-ligase
MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRGEINSYKQLPLNFFQIQTKFRDEVRPRFGVMRAREFLMKDAYSFHTTQESLQETYDAMYAAYSKVFSRMDLNFRAVLADTGSIGGSASHEFQVLAESGEDDIVFSTGSDYAANIEFAEAVAPSAPRAVATEKLRIIDTPNAKTIAELVEQFKLPIEKTVKTLMVHAHEESGHKLVALLVRGDHELNEIKAEKLPQVAKPLTFASEEEIRAVIGAGPGSLGPVNLQLPVVADRSVAVMSDFGAGANIDGKHYFGINWERDLPLPQIADLRNVVEGDISPDGKGTLQIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVMTMGCYGIGVSRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVKELAEELYATLRSHGIDVILDDRKERPGVMFADMELIGVPHNIVIGDRNLDSEEVEYKNRRVGEKQMIKTSEIIDFLLGQIKR
>NZ_CP046294.1|WP_072103933.1|1655473_1656181_+|envelope-stress-response-activation-lipoprotein-NlpE
MAVKKLTITLFLAVGALSLLGCNNRHQPVEQALQPMQQSYQGVLPCADCSGLDTSLFLDSDGTFILKEIYRGSAHAGDNKEGDQTFAEYGTWARTADKLVLTNEQGEKRYFRPVGKNLVMLDQQGLAIKSTLNYQLTPSDQPLPKTPMPLSGMYKYFADAAVFTDCATGLTFPVENNIALETGYLKARKKVGEPVFLTLNGHFDVRPSMEEGQSDKTLIPADNIKFNASKSCASK
>NZ_CP046294.1|WP_005185665.1|1654978_1655395_+|aminoacyl-tRNA-hydrolase
MLIISNHVSLPDSEIELTAIRAQGAGGQHVNKTSTAIHLRFDIKASSLPDYYKERLLLLNSHLMTAEGIVIIKAQEYRSQDMNREAALARLVALIRQAMVVEKARRATKPTKGSKIRRVEGKVRKGATKALRGKIHQE
>NZ_CP046294.1|WP_042569238.1|1654427_1654976_+|YaeQ-family-protein
MALKATIHKAAVNIADMDRNFFQDINLTIAQHPSETDQRMMLRLLAWICHADERLQFTKGLSADDEPEIWRHNDHNGIELWVELGLPEEKRLRKACNQSQQVVLYAYSERAAKVWWPQVRDKLSGHRNLRVRFLGDELMAKLAALANRNMSLQATLQEGTIWLSDAQNNLEISFDEWQGDGQ
>NZ_CP046294.1|WP_032907082.1|1669225_1669567_-|YfiM-family-lipoprotein
MWCPPYLRLLLIAPLFFLSSACTHMANDSWTGKDKAQHFLASAALAAAGTAYGEHQNWSDAKSRNFGLLFSIGIGAGKELYDSRQGGSGWSWKDFAWDVAGAITGYSLYQTVN
>NZ_CP046294.1|WP_080547920.1|1669623_1670982_-|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MMLSKFKRSKHQQHLAQLPKLPQSVDDVQTLYCPKVFRSTLLDLIGLATKRIYLVALYLEQDDAGRDVMNALYQAKLQRPELEICVLVDWHRAQRGRIGAAAVNTNADWYCEMAASHPNVCVPIYGVPVNTREALGVLHLKGFIIDDTVIYSGASINDVYLYQNDKYRYDRYQLITNPSLTEIMVDYVKQRVLSAGAVQRLDRSDRPTNPEIKNETRQFRSSLRDIGYQFPAQASNDELAVTPLVGLGKKSQLNKTIHHLMASADERLTICTPYFNLPALLVRNIIYLLREGKQVEIIVGDKTANDFYIPEDQPFKIIGALPYLYEINLRRFLSRLQRFVDSGQLIVRLWKDGDNTYHLKGMWVDNNWQLITGNNLNPRAWRLDLENAILIHDPKHEMHEQRAKELECIRTHTKVVSHYLELENIQQYPVKVRKLIRRLRRIRIDRLISRIL
>NZ_CP046294.1|WP_005189068.1|1671156_1673799_-|bifunctional-acetate--CoA-ligase-family-protein/GNAT-family-N-acetyltransferase
MSQRGLEALLRPKSIAVIGASEKPERAGFLMMRNLLDGGFNGPILPVTPTHKAVCGVLAYANIANLPITPDLAILCTHDSRNLALLEDLGIRGCKAVIILSAATEQFPELKACAQRHHMRLLGPNSLGLLAPWQGLNASFSPVPIKKGRLAFISQSAAVANTILDWAQQREVGFSYFIALGDSLDIDVDDLLDFLARDGKTSAIMLYIEHISDARRFLSASRSASRNKPILVVKSGRTQRAQQLLNGQQGLDAAYDAAIQRAGLLRVQDTHELFSAVETLSHMHPLRGERLLIVSNGSAPAAMALDELISRNGKLATLSDTTQSALSAVLPSFVSLRNPIDLRDDASAERYLAALKPLLDSTDYDALLLIHSPSAAAPGSKTAELLISAIRQHPRGKRLTLLTNWCGEYSSQDARRLFTEAGIPTYRTPEGAITAFMHMVEYRRNQKQLKETPALPVGLTANTAHVHQLIRQALAEGATQLDTHEVQPILEAYGLRTLPTWIASDSVEAVHIAERLGYPVAIKLRSPDIPHKSEVQGVMLYLRTAIEVQRAADDILDRVKRTYPQARIHGLLVQSMANRAGAQELRIAVEQDAIFGPLIMLGEGGIEWHHETQAAVALPPLNMALARYLIIQAVKGGKIRSRGSLQPLDIPGLSRLLVQVSNLILDCPEISRLDIHPVLASGSEFTLLDVSMQLAPVSGDPQARLAIRPYPHELEQTVELKDGSQCLFRPILPEDEPLLKLFIDQVTKEDLYYRYFSEINEFSHDDLANMTQIDYDREMAFVAVRQKNDGPEIIGVTRALSDPDNIDAEFAVLVRSDLKGLGLGSELLEKMIQYTRSHGLTRLTAVTMPNNRGMIGLAKKLGFSIDVQMEDGIVNLELTL
>NZ_CP046294.1|WP_005189071.1|1673956_1674712_-|DTW-domain-containing-protein
MTEIFITDHALSLDTVLTTENAVLRLRQQRLAASTRAYRARGCRAIRCQGCLLAERFCLCDTIKPQPAASRFCLIMFDTEPLKPSNTGRLIADILPDTQAFLWARTEVAPELLAAISDPTRQPYVVFPEKYAEPPRQILNHLPISDKPPLFILLDGTWNEAKKMFRKSPYLADLPMLSLNVTNSSDYLLREAPRPEQHCTVEVAAALLQQAGDIRAADQLTAHFHYFRQQYLAGKPHHPVGRVTATVEEST
>NZ_CP046294.1|WP_005189074.1|1674867_1675308_-|thioredoxin-TrxC
MNTVCAACMATNRLPEERIDDGAKCGRCGHSLFDGEVINATTETLDKLLQDDLPVVIDFWAPWCGPCRSFAPIFEDVAAERAGKVRFVKVNTEAEPELSTRFRIRSIPTIMLYRNGKMIDMLSGALPKAPFDHWLDEQLSVASAAR
>NZ_CP046294.1|WP_005189077.1|1675517_1676612_+|tRNA/rRNA-methyltransferase
MNDSFSGKNGKVKVMYVRSDESSSDDRNNNNRSKNQRPASKGRPGDNAGRGSSPRSNDSRRNDSGRNERVSPSRPARSEGNGPYDSPWKTVSRAPSEEPEFDHGGISGKSHVDPAQLRRQRAEETRVYGENACKALFESRPDAIVRAWFVQSVTPRFREALKWMAANRKAYHVVEEEELAKASGTEHHGGVCFLIKKRQGLDAETYLQQQTQAKDCVLALEDVGNPHNLGGIMRTCAHFGINGVLLQDPAMLESGAAVRTAEGGAEHIKAINADDFLSVLDTFRKAGYTIVTTSSHKGVSLSKAELPAKMVLVLGQESDGLTDSAWQQGDMSVSIGGTGRVESLNVSVATGILLAEWWRQNSAQ
>NZ_CP046294.1|WP_005189079.1|1676760_1678293_-|multidrug-efflux-MFS-transporter-permease-subunit-EmrB
MAQKPLEGAQLAWMTVALSLATFMQVLDSTIANVAIPTIAGDLGSSNSQGTWVITSFGVANAISIPITGWLAKRIGEVRLFLWATGLFALASWLCGISNSLGMLIFFRVIQGLVAGPLIPLSQSLLLNNYPPAKRSMALALWSMTIVVAPIFGPILGGYISDNYHWGWIFFINIPIGLVVILVAGSTLKGRETKTEIKPIDTVGLVLLVVGIGALQIMLDQGKELDWFNSTEIIVLTVIAVIAITFLIVWELTDDHPVIDLSLFKSRNFTIGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGILPVLLSPIIGRFSHRIDMRQLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFVQGFAIACFFMPLTAITLSGLPPERIAAASSLSNFLRTLAGSIGTSITTTLWTQRESMHHSQLTEFVNPYNPNATLMYQELEKLGMNKQQASAYLAREITNQGLIISANEIFWLSAGVFLVLLALVWFAKPPFTSGGGGGAH
>NZ_CP046294.1|WP_005189080.1|1678332_1679508_-|multidrug-efflux-MFS-transporter-periplasmic-adaptor-subunit-EmrA
MSTSAEAQIPQQPQNNKKKQRKHVLLLLTVIFIIIGVAYLIYWFLVLRHHQETDNAYISGNQVQIMSQVSGSVISVNVENTDLVKSGDVLLALDPTDAEQAFEQAKTALANSVRQTHQLMINSKQYQANIALKKTELSKSQNDLSRRVVLGSANAIGREEVQHARDAVDAAQASLDVAIAQYNANQALVLNTPLEKQPAVEQAAAKLRDAWLSVQRTKVVSPVDGFVSRRSVQVGAEIANGAPLMAVIPANQMWVDANFKETQLANMRIGQSATVITDFYGDNVVYQGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDNKQLAEHPLRIGLSTTVKVDTTNTDGQVLAQNVRKEPAFVTNALSLDLAPVNQMISDIVHANAG
>NZ_CP046294.1|WP_032907085.1|1679976_1680489_-|transcriptional-repressor-MprA
MESSFSPIEQMLNFRAKRQKDFPYQEILLTRLCMHMHSKLLENRNKMLKAQGINETLFMALITLDAQESHSIQPSELSAALGSSRTNATRIADELEKKGWIERRESHNDRRCLHLHLTEAGVEFLNQLLPPQHKCLHFLWSTLDADEQQQLETLTRKLLTRLDQMEVPEP
>NZ_CP046294.1|WP_032907086.1|1680660_1681002_-|L-valine-transporter-subunit-YgaH
MNSDVLVIGLVVGMVNYLFRYLPLRLGPARKQTSLQRSRVSLLLDSIGIASICALLVVSSTPEIMHNPQKLIPTLVGFLVICGGFYKTNSIIFATLFGALSYGLTFKLLMILG

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Crispr_ID: NZ_CP046294_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046294_2

4819150-4819300

Orphan

I-F

Consensus_repeat	Method
CATTTCTAAGCTGCCTGCACGGCAGCGAAC	CRISPRCasFinder
CATTTCTAAGCTGCCTGCACGGCAGCGAACT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP046294_2

>merge|NZ_CP046294|2|4819150-4819300|CRISPRCasFinder,PILER-CR
AATTTCTAAGCTGCCTGTACGGCAGCGAACTTGGAGTTTGGTCATACGCATTGCGACAGGCATTTCTAAGCTGCCTGCACGGCAGCGAACTGCAGCACGCATAATCGCTTTCATTAATGCCATTTCTAAGCTGCCTGCACGGCAGCGAACG

>NZ_CP046294|2|2|4819150-4819299|CRISPRCasFinder
AATTTCTAAGCTGCCTGTACGGCAGCGAAC	TTGGAGTTTGGTCATACGCATTGCGACAGG
CATTTCTAAGCTGCCTGCACGGCAGCGAAC	TGCAGCACGCATAATCGCTTTCATTAATGC
CATTTCTAAGCTGCCTGCACGGCAGCGAAC

>NZ_CP046294|2|1|4819151-4819300|PILER-CR
ATTTCTAAGCTGCCTGTACGGCAGCGAACTT	GGAGTTTGGTCATACGCATTGCGACAGGC
ATTTCTAAGCTGCCTGCACGGCAGCGAACTG	CAGCACGCATAATCGCTTTCATTAATGCC
ATTTCTAAGCTGCCTGCACGGCAGCGAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046294.1\|WP_005186679.1\|4814169_4816185_-\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|293739
NZ_CP046294.1\|WP_005186675.1\|4816984_4818526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_032907234.1\|4809581_4810193_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP046294.1\|WP_155967941.1\|4827215_4827926_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376361
NZ_CP046294.1\|WP_050144290.1\|4829562_4830069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_005189684.1\|4807918_4808146_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046294.1\|WP_155967944.1\|4828738_4829038_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_050116882.1\|4832090_4832621_+\|lipoprotein	unknown	unknown	gnl\|CDD\|369706
NZ_CP046294.1\|WP_155967948.1\|4831493_4832075_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_049688882.1\|4829171_4829486_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_005189668.1\|4811670_4812360_-\|PAS-and-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197715
NZ_CP046294.1\|WP_032907269.1\|4810341_4811649_-\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP046294.1\|WP_032907236.1\|4808227_4808476_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046294.1\|WP_005189677.1\|4808889_4809489_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225158
NZ_CP046294.1\|WP_005186668.1\|4822716_4823991_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|366149
NZ_CP046294.1\|WP_005189681.1\|4808580_4808826_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|372675
NZ_CP046294.1\|WP_042568649.1\|4828449_4828650_+\|AlpA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225848
NZ_CP046294.1\|WP_005189666.1\|4812384_4812795_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP046294.1\|WP_071706247.1\|4832633_4832909_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046294.1\|WP_032906675.1\|4823983_4826080_+\|peptidase-domain-containing-ABC-transporter	unknown	unknown	gnl\|CDD\|225183

Protein	Function_ID	Function_description	E-value
NZ_CP046294.1\|WP_005186679.1\|4814169_4816185_-\|LTA-synthase-family-protein	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	7.14767e-50
NZ_CP046294.1\|WP_032907269.1\|4810341_4811649_-\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	7.19967e-87
NZ_CP046294.1\|WP_032907234.1\|4809581_4810193_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.57584e-10
NZ_CP046294.1\|WP_155967941.1\|4827215_4827926_+\|hypothetical-protein	gnl\|CDD\|376361	pfam00654, Voltage_CLC, Voltage gated chloride channel. This family of ion channels contains 10 or 12 transmembrane helices. Each protein forms a single pore. It has been shown that some members of this family form homodimers. In terms of primary structure, they are unrelated to known cation channels or other types of anion channels. Three ClC subfamilies are found in animals. ClC-1 is involved in setting and restoring the resting membrane potential of skeletal muscle, while other channels play important parts in solute concentration mechanisms in the kidney. These proteins contain two pfam00571 domains.	0.00844116
NZ_CP046294.1\|WP_005189684.1\|4807918_4808146_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.51704e-09
NZ_CP046294.1\|WP_050116882.1\|4832090_4832621_+\|lipoprotein	gnl\|CDD\|369706	pfam08139, LPAM_1, Prokaryotic membrane lipoprotein lipid attachment site. In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognizes a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached.	0.001915
NZ_CP046294.1\|WP_005189668.1\|4811670_4812360_-\|PAS-and-helix-turn-helix-domain-containing-protein	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	4.17979e-09
NZ_CP046294.1\|WP_032907236.1\|4808227_4808476_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.47929e-07
NZ_CP046294.1\|WP_005189677.1\|4808889_4809489_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|225158	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only].	5.48461e-40
NZ_CP046294.1\|WP_005186668.1\|4822716_4823991_+\|HlyD-family-secretion-protein	gnl\|CDD\|366149	pfam00529, HlyD, HlyD membrane-fusion protein of T1SS. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD and HlyB are inner-membrane proteins and specific components of the transport apparatus of alpha-haemolysin. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.	9.33667e-62
NZ_CP046294.1\|WP_005189681.1\|4808580_4808826_+\|transcriptional-regulator	gnl\|CDD\|372675	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding.	1.39305e-36
NZ_CP046294.1\|WP_042568649.1\|4828449_4828650_+\|AlpA-family-transcriptional-regulator	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	1.25499e-22
NZ_CP046294.1\|WP_005189666.1\|4812384_4812795_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	9.53865e-14
NZ_CP046294.1\|WP_032906675.1\|4823983_4826080_+\|peptidase-domain-containing-ABC-transporter	gnl\|CDD\|225183	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms].	0

>NZ_CP046294.1|WP_005186675.1|4816984_4818526_-|hypothetical-protein
MTEKLIHRFIIILFCCLLSIFLTACTSLVSGERRIPVKVTDSEDIKKITSIANNAPLITHPMGDRPVKIYKIAFDGTLNDRTRVPSGERETLVARIAGLIKADEYYPGAGMQYGNTNYWDASSGDSSVRIATEAKDKFFTQVQLWLNENPDTDIRVFVTGFSRGAATARHFINIVSSQWYTHFNSQSGQFVAKSPRFYALLYDTVATGQQDKLVLTIPTSVDYLVHFVATDEARNRFFTPTVDIDQTPLPLGTQFSPIKRINTIYLPGAHSDIGASYSNGIGDSYITLTEQFLFMMGLVQTNCWEIYNDPLLAGKHDSRGILDVIFGSQNPSTVMAVNRSSIVKEAIPLAIEERKDIAHRLDDMWIANSKRMSVMDVSRSEMLLPSFTLQKSAAGIVLISTSNIVKPESLKLSPEGDATRLRYRLTMGKIENSLLLKSQVTRHIKPEGSKVAFSILDTPPESYMATWVDNQLVELTLVTVSSEAIYEAPLQRCVKQLDGTFRSPISTMVVSFN
>NZ_CP046294.1|WP_005186679.1|4814169_4816185_-|LTA-synthase-family-protein
MWFYRFKHAFIALLLPWILAVTIQLAGRVYLLNDYGNPESLAGVSTDVQRMFLIGGLFDVRIASLIFVPCLLIAGLLAFNKTSFRLWQRFWPWFATLFGTLVTILTVGNIFYYATYQRPIDIFVFGLVEDDTVAVLKTMWSDYPVIRSAICLILFVAAISWIFHRWQRKISTWPEQHSGIAVSAISTLIILALSFIGVRGSMGTFPLRQSDAQISDINLLNMLTPSGPMALTWALKAHREYSNFPPATEKQGEELLSQFFTKPTEANLKPFMAKTAPNAIAKKSPPNVVFVVMESMGYYLEGYDRSDRDVFGTLKQHWKTDWRFGRFISEGNGTIDSLSRLFVRSPNSNISQSSAQDIDFSSNMFKPFLANGYKVIFVTSGNGSWRNLNQFLPHLGISEFVEQNGLKKRYPEAETGTWGVPDEYMFRYIEERLAQADKEGEHVLIMSMSTTHHPPFKAPNSYAKTDIKLSDAEKQRLSNLASGKQLDEVFHTLRYTNDQLGQFISWVKLQSLGEHTIIAATGDHNIRGISYPDAAEQALSRAVPFYLYVPQRYRQNSHFDASRVGSHKDIWPTLYQLSLSETPYYRTGCDLLSEKPDAIWCQGYNPELLITQQGSFTLSGKGEFYPWVDKEGLLLGAVQPMDDEQEKTFSRWQAFTPLLSWQLNKQVQELK
>NZ_CP046294.1|WP_005189666.1|4812384_4812795_-|GNAT-family-N-acetyltransferase
MNINVTDTPNPQDEEYVIDSLWAHNNKTEAVDIHPLFLTVTHDNGKIVAGLVARTWWGGLEVQYLWVSDEYRKSGYGRQLMEKAEEEAIKRGCHMAYVDTFDFQARGFYEKLGYRVYGDLGGYAKKYTRHYLAKEI
>NZ_CP046294.1|WP_005189668.1|4811670_4812360_-|PAS-and-helix-turn-helix-domain-containing-protein
MDLPDKNNEIYFKGLIAMMEHLSEPWGIKDLSSRHIYMNKAAYLYTNTPLNFEVEGKLDDEFPANWAEFSPEFMEHDKRTEESQGRVTVIETHYWYGKDTLTPFISEKLPIYNDKKEVIGVMWSAKPLNTLSPLKYINQQKPSVLTTETNSKTFTRAELDVIFLMLQRLSVKEIAKIYNISTKTIENRIYTIYQKSDVHTLQQFEEFCKFAHLDNYIPDRLVAKGIQFI
>NZ_CP046294.1|WP_032907269.1|4810341_4811649_-|cytosine-permease
MIKIEDYPLSRVPQDKRVSFLSVAIVHMGMLTALDQFMLGAVLGNSMTLTDAFTAILIGSIIFGVVTYGLGLAGMREGISGSLLARWCGFGRLGSVLIGIVVAVSLLGWFGIQNAIFAKSLDFALGNKLGFGFAAALSGSLLTILVAFGFKALRIAARIAVPMFILLVAYISISTLSGHNLHEIMQLIPPGDPLSISAGITIVVGGAIVASLMTPDLTRYSKNGKHVLGVTIFTIVAGEFVVNGLAILIAKTLGTADVVTIMSQAAGGAGLLVVVFSTLRVNDLNLYSSSLGIVNAVEGLTGKKLKYTLTTLVIGVLGTTLSVLGILDRFVDFLTVLGVVFPPIIGIMLVDYFVLRSHRNILDKSRLEGKLPDETQTPVIGWVAIIASIVGSVIGLLTEWGIPTINSLVAASLIYWLFKVAVSRNQKSIESEKAI
>NZ_CP046294.1|WP_032907234.1|4809581_4810193_+|TetR/AcrR-family-transcriptional-regulator
MSTSKKNVSSRLRLSREERYHQLMNTAWQLVREEGTEALTLGRLAERSGVTKPVVYDHFGTRAGLFAELYKEFDRRQTVLMDAAIAQCEPTLTAIATVTASSYIDCVLLQGQEISGVIAALKGTPELDEMKREYSKAYIHKCRNILAPYAKGNLISDASLWALLGAAEGLSCSAASGEITASQAKSELFELIVAIVERSMGQR
>NZ_CP046294.1|WP_005189677.1|4808889_4809489_-|NAD(P)H-dependent-oxidoreductase
MHSLIVTSHPLHESLTNSVARQIAAGLVASDPTHTYEIADIATEGFDPRFTAVDIAAFNRQASLSDDVLAEQQRVERADALVLVFPIYWWSMPALLKGWIDRVFSNGWAYDDAGELIKKLTHLPVHIIGIGAATHKTYINHGFAEAMKIQIEHGIFNFCGAPVMSSTVLLLPDLGGPEQVLEAAYNMGTNIFACETAAG
>NZ_CP046294.1|WP_005189681.1|4808580_4808826_+|transcriptional-regulator
MDKQDWHPADIIAGLKKRGTTMAALSRESGLASSTLANTLLRHWPKGENLIAQVLELHPAEIWPSRYLKPKKREKQCQLRN
>NZ_CP046294.1|WP_032907236.1|4808227_4808476_-|helix-turn-helix-transcriptional-regulator
MASIYSEEYQQVIKALRQARIDRRISQQQLAKALSRPQSFVAKVENGERRLDFVELIHIARLLSIDELSLISMIMSATVPIR
>NZ_CP046294.1|WP_005189684.1|4807918_4808146_-|helix-turn-helix-transcriptional-regulator
MASIYSDEYQSVIKSLRDQRIAKGITQESLASALGRPQSFIAKVENGERRLDVVEFVHIAKLLGVKVEDVLGRIG
>NZ_CP046294.1|WP_005186668.1|4822716_4823991_+|HlyD-family-secretion-protein
MFRQEAIENQKMKWRGRAILLPGIPVWLVGGFCTFFFVAFLAFIIAGTYTRRVNVGGEITTYPRAVSVYSGVQGFVVRKFVTEGYIVKKGDPVYLIDISKSTRSGVVSDNQRQGIEHQLERIGNIISRIEISKKTTLNSLEKQKIQYTAAFKRSSAIINKAEQGIKIMKDNMDNYRRYQIKGLINKDQLTNQVALYYQQQNNLLSLSGQNEQNSLQIINLESQIQTQSAEFDNRIYQMELQRYTLQNELVNTDAGGEIIVRALSDGQIDSLSVTVGQMVNVGDSLLQIIPELISHYSLVIWVPNDAIPYITIGDKVNVRYEAFPAEKFGQFAGTVEVISKTPASPQEMMTYQGAPKNTQAASIPYYKIIVRPEQQTVFYDGKRLSLENGMKAQSTLFLEKRKIYEWMLSPFYDMKHSAMGLVNE
>NZ_CP046294.1|WP_032906675.1|4823983_4826080_+|peptidase-domain-containing-ABC-transporter
MNKTSFNAMIQKVDLGFRHSVPVVHQTESSECGLACLAMICGHYGKNIDLISLRQQFNLSARGATLAGINGIAGQLGMTTRALSLDLGEMGSLKKPCILHWNFNHFVVLVSVRRQRFVIHDPARGRRTVGLAEMSQYFTGVALEIWPGSEFTAETVRNRIRLGRLIRSVQGIKGALIKIFSLSLVIESINLVMPVATQLVMDHTIPAGDRGLLTLICVGLLFFILLRAAVSMVRAWSSLVMATLINVQWKIGLFSHLIHLPLGYFERRKLGDIQSRFGSLDALQATFTTSVVGAMMDGIMVIGVLVMMVLYGGYLTWIVLGFTVVYVLIRLLTYGYYRQLSEESLIRSARASSYFMETLYGIATVKMQGMTERRSAHWLNLEIDTINTGIKVTKMDLFFGGINTFIAACDQAVILWLGASLVIDNQMTLGMFVAFGAFRGQFSDRVSSLTSFLLQLRMMSLHNERIADIALNETDNQKPDRSYVAEMQPFSLEARDLTYRYDSQSPPVFSDLNITVMPGESVAIMGPSGAGKTTLMKVLCGLFEAGSGKVMVDGTDIQQLGINNYHKMIACVMQDDKLFSGSIRENIGGFADDIDELWMIECTRASYIHNTIMKMPMGYETLIGELGEGLSGGQKQRIFIARALYRKPGILFMDEATSHLDKESEEFVNQAIKKMNITRIIIAHRASTIKSADRVITI
>NZ_CP046294.1|WP_155967941.1|4827215_4827926_+|hypothetical-protein
MLRINHIIKILCGIKSYAPHTYKTRTDKIIDKIHTRLFIIGITFLASLAFLVVLYKLTDFFKNETIIYFIFSMYFGTTITGLLIMILPPVLGIKHLINWKKETSDEFVCEIFHDEQNAILLLDYSEKELLYAVHWLQMKINRVNLRVSTFFGEKTAVLSVLALTYSAVQSSIGFDKLSHTFTEGLFASGITNTFVTFGLAFLLGISLGALMLKKFANHQLYLKEIVELAIRIQKNA
>NZ_CP046294.1|WP_042568649.1|4828449_4828650_+|AlpA-family-transcriptional-regulator
MTTRRFIRLPEVMNKTGYSRAWIYRLISEGRFPSQVKIGMRAMAFIESEIDEWIDQMIDLSRNKSA
>NZ_CP046294.1|WP_155967944.1|4828738_4829038_+|hypothetical-protein
MKIKTFENTATEFFYVLSMKIYVESVSDTEESYSVFCDRAMNIPFMDAFFSEIISLIEKNFNHYVKRYGADEKLADVDFKVVKRALFESHTEALEINEH
>NZ_CP046294.1|WP_049688882.1|4829171_4829486_+|hypothetical-protein
MKNRLTVKDFKNKGSFFFYAVSLIACQESIDEISSYYNGNRTDSLSNDVLLKLLINNIVMYIFNNFENMVDTYGYNENLDEVDLDQVIEKLGVILKEKISEGLV
>NZ_CP046294.1|WP_050144290.1|4829562_4830069_-|hypothetical-protein
MAGKTFNQNPFIFEDDIEIETRGRKRTVARGEKFQTPEGDKYEKVIHSIQEVDKAKFVKIFISRVRVLFDLTLTGNKLFYIFMFVMSDVIGKDEVYMNFEKAKDIAAQCDFNLSNPVYYRGIKELIDKKIIAPSKSKYIYYINPAVLFNGDRAKFIEEIRVKEEKKLK
>NZ_CP046294.1|WP_155967948.1|4831493_4832075_+|hypothetical-protein
MSKSIALSLALTVIALSGCQQLNEGVNKVNGAINTSLSSLNGTVDNALGLSTAKQDTGPVSSVSGFGPVCKDYEENAMAAEKKWTGKRVSIANAIVLEVTKGRSASDMMTGMEKAAHANYYLLFKTSDTNYCGGMVWINYYSGLDDAVLTYKKGQKVSITGTINNFEVRGFTTVNNADMPVRLVVLSNGTISH
>NZ_CP046294.1|WP_050116882.1|4832090_4832621_+|lipoprotein
MRKILVAAGLAVLLSGCGEKGDFEKAINAKIGQTKTCYSLNNNNVSFPIKLSKPRFDENGTGTGSVILDGLVEQGLMAFVKGWDNNVLGITEEGKQAKIWDAKEGVCIGRRVVEEVKEWTEPGNGNQKVVRVSYTWKLADVPSWVDKKAFASVRGMNEAADGAITLVKTSNGWKAN
>NZ_CP046294.1|WP_071706247.1|4832633_4832909_+|hypothetical-protein
MKNNTIQCPFCLKESQDGIHVCTGCMATVLYGTFPQWYAAVAIFLSFGLSILIGMSTGMAGATISIPIIAIVGFVSGKMIFSDNVVFRKRM

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046294_2	2.4\|4819242\|29\|NZ_CP046294\|PILER-CR	4819242-4819270	29	NZ_CP011016	Campylobacter coli strain FB1 plasmid pCC42, complete sequence	18472-18500	7	0.759
NZ_CP046294_2	2.4\|4819242\|29\|NZ_CP046294\|PILER-CR	4819242-4819270	29	NZ_CP040242	Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence	17203-17231	7	0.759
NZ_CP046294_2	2.4\|4819242\|29\|NZ_CP046294\|PILER-CR	4819242-4819270	29	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	6447-6475	7	0.759
NZ_CP046294_2	2.2\|4819240\|30\|NZ_CP046294\|CRISPRCasFinder	4819240-4819269	30	NZ_CP028188	Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence	6447-6476	8	0.733
NZ_CP046294_2	2.2\|4819240\|30\|NZ_CP046294\|CRISPRCasFinder	4819240-4819269	30	NZ_CP011016	Campylobacter coli strain FB1 plasmid pCC42, complete sequence	18471-18500	8	0.733
NZ_CP046294_2	2.2\|4819240\|30\|NZ_CP046294\|CRISPRCasFinder	4819240-4819269	30	NZ_CP040242	Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence	17202-17231	8	0.733

1. spacer 2.4|4819242|29|NZ_CP046294|PILER-CR matches to NZ_CP011016 (Campylobacter coli strain FB1 plasmid pCC42, complete sequence) position: , mismatch: 7, identity: 0.759

gcagcacgcataatcgctttcattaatgc	CRISPR spacer
gataaattcaaaatcgctttcattaatgc	Protospacer
*  . *. ** ******************

2. spacer 2.4|4819242|29|NZ_CP046294|PILER-CR matches to NZ_CP040242 (Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence) position: , mismatch: 7, identity: 0.759

gcagcacgcataatcgctttcattaatgc	CRISPR spacer
gataaattcaaaatcgctttcattaatgc	Protospacer
*  . *. ** ******************

3. spacer 2.4|4819242|29|NZ_CP046294|PILER-CR matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 7, identity: 0.759

gcagcacgcataatcgctttcattaatgc	CRISPR spacer
gataaattcaaaatcgctttcattaatgc	Protospacer
*  . *. ** ******************

4. spacer 2.2|4819240|30|NZ_CP046294|CRISPRCasFinder matches to NZ_CP028188 (Campylobacter coli strain CFSAN054106 plasmid pGMI16-001, complete sequence) position: , mismatch: 8, identity: 0.733

tgcagcacgcataatcgctttcattaatgc	CRISPR spacer
ggataaattcaaaatcgctttcattaatgc	Protospacer
 *  . *. ** ******************

5. spacer 2.2|4819240|30|NZ_CP046294|CRISPRCasFinder matches to NZ_CP011016 (Campylobacter coli strain FB1 plasmid pCC42, complete sequence) position: , mismatch: 8, identity: 0.733

tgcagcacgcataatcgctttcattaatgc	CRISPR spacer
ggataaattcaaaatcgctttcattaatgc	Protospacer
 *  . *. ** ******************

6. spacer 2.2|4819240|30|NZ_CP046294|CRISPRCasFinder matches to NZ_CP040242 (Campylobacter coli strain S9 plasmid pCcS9_3, complete sequence) position: , mismatch: 8, identity: 0.733

tgcagcacgcataatcgctttcattaatgc	CRISPR spacer
ggataaattcaaaatcgctttcattaatgc	Protospacer
 *  . *. ** ******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

968412 : 1003383

Enterobacteria_phage(25.71%)

portal,protease,tail,holin,terminase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080985879.1\|968412_969999_+	hypothetical protein	A0A219YCV0	Aeromonas_phage	2.7e-05	46.6
WP_050089037.1\|970075_970348_-	pyocin activator protein PrtN	K7PGU0	Enterobacteria_phage	1.2e-19	61.8
WP_155967481.1\|970907_971540_-	hypothetical protein	NA	NA	NA	NA
WP_155967483.1\|971536_971860_-	hypothetical protein	NA	NA	NA	NA
WP_053011688.1\|971856_972267_-	hypothetical protein	NA	NA	NA	NA
WP_155967485.1\|972259_972694_-	HNH endonuclease	E7EKU5	Edwardsiella_phage	1.1e-43	56.7
WP_155967487.1\|973446_973959_-	hypothetical protein	Q7Y3W7	Yersinia_phage	9.3e-77	76.5
WP_155967489.1\|974131_974662_-	HD family hydrolase	K7PKJ9	Enterobacteria_phage	5.0e-49	58.1
WP_155967491.1\|974753_975575_-	DUF2303 family protein	Q8HAA2	Salmonella_phage	2.5e-87	60.4
WP_046050063.1\|975622_975979_-	hypothetical protein	A0A0P0ZGH3	Escherichia_phage	7.0e-39	67.8
WP_155967493.1\|977204_977852_-	helix-turn-helix domain-containing protein	K7PLZ5	Enterobacterial_phage	5.2e-32	42.2
WP_155967495.1\|977953_978217_+	cell division protein	NA	NA	NA	NA
WP_155967497.1\|978209_978743_+	DNA-binding protein	NA	NA	NA	NA
WP_050882733.1\|978932_980033_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	6.3e-46	52.1
WP_155967499.1\|980029_981160_+	site-specific DNA-methyltransferase	A0A1P8DTZ3	Salmonella_phage	1.9e-85	46.0
WP_155967501.1\|981178_981880_+	phage regulatory protein/antirepressor Ant	A0A1P8DTE1	Proteus_phage	5.4e-51	51.8
WP_155967503.1\|981876_982878_+	DUF968 domain-containing protein	S5FV02	Shigella_phage	1.4e-92	50.0
WP_155967505.1\|982768_983557_+	antitermination protein	NA	NA	NA	NA
WP_155967507.1\|983894_984110_+	hypothetical protein	NA	NA	NA	NA
WP_050879812.1\|984328_984814_-	hypothetical protein	E5AGG6	Erwinia_phage	1.7e-43	60.2
WP_050074309.1\|985100_985472_+	hypothetical protein	A0A1S5NRL1	Burkholderia_phage	1.4e-18	40.7
WP_050074310.1\|985468_985747_+\|holin	phage holin family protein	A0A0F6TJP7	Escherichia_coli_O157_typing_phage	4.5e-09	39.8
WP_050074311.1\|985743_986139_+	M15 family metallopeptidase	K0NZV5	Escherichia_virus	2.3e-38	66.2
WP_155967509.1\|986135_986480_+	DUF2570 domain-containing protein	NA	NA	NA	NA
WP_050074313.1\|986877_987126_+	hypothetical protein	Q8W634	Enterobacteria_phage	9.8e-24	63.0
WP_042569622.1\|987222_987456_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	2.2e-17	63.2
WP_155967511.1\|987771_988311_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	4.3e-56	64.9
WP_005182509.1\|988310_990413_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.1e-304	74.5
WP_032905657.1\|990409_990625_+	hypothetical protein	K7PMB5	Enterobacterial_phage	2.0e-20	72.9
WP_155967513.1\|990624_992106_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	8.1e-198	68.2
WP_155967966.1\|992146_994090_+\|protease	Clp protease ClpP	K7PGT6	Enterobacteria_phage	4.2e-279	74.4
WP_050310617.1\|994172_994499_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	2.5e-27	63.6
WP_155967516.1\|994491_994767_+	DNA breaking-rejoining protein	K7PH55	Enterobacterial_phage	1.3e-13	47.5
WP_005182524.1\|994778_995333_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	8.9e-49	54.7
WP_087785208.1\|995329_995734_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	1.5e-42	61.4
WP_050074323.1\|995794_996280_+	hypothetical protein	A0A1W6JP06	Morganella_phage	9.8e-44	63.2
WP_155967518.1\|996713_996995_+	DUF4035 domain-containing protein	S4TND7	Salmonella_phage	1.6e-17	55.1
WP_155967520.1\|997029_1000470_+	tape measure protein	A0A1P8DTH2	Proteus_phage	7.9e-79	29.2
WP_155967522.1\|1000466_1000820_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	2.3e-26	52.1
WP_050322316.1\|1000828_1001584_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	3.9e-79	54.6
WP_087785213.1\|1001586_1002300_+	C40 family peptidase	A0A1W6JP31	Morganella_phage	8.4e-84	59.5
WP_050322318.1\|1002331_1002751_+	hypothetical protein	J9Q806	Salmonella_phage	8.5e-20	40.0
WP_050322319.1\|1002795_1003383_+\|tail	tail assembly protein	K7PH91	Enterobacterial_phage	2.0e-51	59.4

DBSCAN-SWA_2

1689210 : 1736213

Salmonella_phage(25.45%)

holin,terminase,integrase

attL 1684633:1684646|attR 1703561:1703574

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1684633:1684646	attL	NA	NA	NA	NA
WP_053012296.1\|1689210_1690482_-\|integrase	site-specific integrase	Q8W658	Enterobacteria_phage	1.4e-126	52.7
WP_049525557.1\|1690514_1690766_-	DNA-binding protein	A0A286S2A4	Klebsiella_phage	5.8e-16	50.0
WP_053012297.1\|1690758_1691004_-	hypothetical protein	A0A2H4J398	uncultured_Caudovirales_phage	3.1e-14	55.3
WP_155967981.1\|1691109_1691427_-	hypothetical protein	A0A0A7NV51	Enterobacteria_phage	3.1e-06	54.5
WP_155967556.1\|1691533_1692169_-	DNA methyltransferase	I6PDF5	Cronobacter_phage	7.2e-87	73.0
WP_050311075.1\|1692165_1692384_-	hypothetical protein	NA	NA	NA	NA
WP_042569889.1\|1692391_1692598_-	hypothetical protein	NA	NA	NA	NA
WP_155967558.1\|1692648_1693404_-	hypothetical protein	H6WRY1	Salmonella_phage	1.4e-121	77.3
WP_155967560.1\|1693471_1693975_-	hypothetical protein	NA	NA	NA	NA
WP_155967562.1\|1693984_1694212_-	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	5.1e-19	65.2
WP_155967564.1\|1694248_1694581_-	hypothetical protein	NA	NA	NA	NA
WP_155967566.1\|1694856_1695162_-	hypothetical protein	NA	NA	NA	NA
WP_155967568.1\|1695161_1695818_-	hypothetical protein	NA	NA	NA	NA
WP_155967570.1\|1695857_1696040_-	DUF1317 family protein	A0A193GYJ8	Enterobacter_phage	1.8e-11	58.8
WP_057632488.1\|1696036_1696720_-	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	5.6e-77	59.5
WP_071704723.1\|1696716_1697634_-	recombinase RecT	F1C5B8	Cronobacter_phage	2.5e-109	66.1
WP_155967572.1\|1697633_1697930_-	hypothetical protein	NA	NA	NA	NA
WP_155967574.1\|1698084_1699056_-	hypothetical protein	M9P0E1	Enterobacteria_phage	2.6e-43	61.0
WP_155967576.1\|1699343_1699628_-	hypothetical protein	K7PHN6	Enterobacterial_phage	3.3e-15	52.2
WP_155967578.1\|1699649_1700231_-	pentapeptide repeat-containing protein	Q8HAH0	Salmonella_phage	3.7e-29	70.4
WP_155967580.1\|1700329_1700896_-	hypothetical protein	A0A2I7QPA2	Vibrio_phage	9.4e-30	40.8
WP_050144656.1\|1701842_1702049_+	hypothetical protein	A0A2H5BFH9	Salmonella_phage	4.9e-13	58.2
WP_155967582.1\|1702330_1703350_+	AAA family ATPase	H2BD62	Pseudomonas_phage	3.8e-53	37.8
WP_049602446.1\|1703575_1704208_-	helix-turn-helix domain-containing protein	K7P850	Enterobacteria_phage	7.2e-71	61.4
1703561:1703574	attR	NA	NA	NA	NA
WP_049602445.1\|1704311_1704527_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	1.8e-18	67.6
WP_049525808.1\|1704653_1704947_+	hypothetical protein	A2SY75	Escherichia_phage	1.2e-23	62.9
WP_155967584.1\|1704956_1705490_+	hypothetical protein	A0A291AXH9	Shigella_phage	2.4e-43	49.4
WP_053012039.1\|1705725_1706583_+	replication protein	Q76H52	Enterobacteria_phage	4.4e-47	45.5
WP_155967586.1\|1706584_1707922_+	AAA family ATPase	A0A2I7REC3	Vibrio_phage	1.2e-80	38.3
WP_155410586.1\|1707934_1708183_+	hypothetical protein	NA	NA	NA	NA
WP_155967588.1\|1708179_1708602_+	hypothetical protein	NA	NA	NA	NA
WP_050319657.1\|1708598_1708784_+	hypothetical protein	R9TNE4	Aeromonas_phage	2.2e-12	58.3
WP_155967590.1\|1708780_1709227_+	DUF551 domain-containing protein	A0A248SKW5	Klebsiella_phage	4.4e-06	39.2
WP_155967592.1\|1709223_1709574_+	hypothetical protein	A0A077KB17	Edwardsiella_phage	4.0e-15	37.2
WP_155967983.1\|1709573_1710044_+	recombination protein NinB	I6R9D0	Salmonella_phage	3.3e-44	57.5
WP_155967594.1\|1710183_1710531_+	DUF2591 domain-containing protein	R9VYJ6	Serratia_phage	7.1e-12	40.2
WP_155967596.1\|1710523_1711039_+	hypothetical protein	A0A0H4IQ56	Shigella_phage	6.7e-67	72.8
WP_155967985.1\|1711263_1711788_+	hypothetical protein	H6WRY9	Salmonella_phage	1.0e-30	47.4
WP_155967598.1\|1711784_1711979_+	protein ninH	Q777W6	Enterobacteria_phage	1.8e-09	59.3
WP_155967600.1\|1711975_1712782_+	antitermination protein	M9NZB0	Enterobacteria_phage	8.9e-74	52.6
WP_050133399.1\|1713208_1713406_+\|holin	holin	A0A1V0E5H9	Salmonella_phage	2.3e-15	60.9
WP_053012049.1\|1713386_1713869_+	lysozyme	A0A2H4JCH1	uncultured_Caudovirales_phage	1.6e-54	63.5
WP_053012050.1\|1713853_1714246_+	hypothetical protein	U5P0U9	Shigella_phage	2.7e-07	30.0
WP_053012051.1\|1714789_1715476_+	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	2.2e-110	86.4
WP_155967602.1\|1715576_1716002_+	hypothetical protein	NA	NA	NA	NA
WP_155967604.1\|1716118_1716754_+	hypothetical protein	H9C189	Pectobacterium_phage	8.8e-85	70.6
WP_155967606.1\|1716787_1717255_+	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	4.5e-54	72.3
WP_155967608.1\|1717238_1718558_+\|terminase	PBSX family phage terminase large subunit	Q5G8Y7	Enterobacteria_phage	4.6e-237	89.3
WP_155967610.1\|1718754_1720125_+	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	1.0e-178	71.3
WP_053012054.1\|1720084_1721008_+	hypothetical protein	Q5G8Y3	Enterobacteria_phage	8.0e-103	63.8
WP_155967612.1\|1721011_1722289_+	hypothetical protein	G0ZND7	Cronobacter_phage	6.1e-186	76.7
WP_155967615.1\|1722288_1722729_+	hypothetical protein	A0A125RNM2	Pseudomonas_phage	1.9e-41	64.1
WP_155967618.1\|1722739_1723837_+	hypothetical protein	J7I0Q9	Pseudomonas_phage	4.6e-150	71.6
WP_155967621.1\|1723847_1724033_+	glycoprotein	Q5G8X9	Enterobacteria_phage	1.6e-10	57.1
WP_155967624.1\|1724096_1724495_+	hypothetical protein	G0ZNE1	Cronobacter_phage	4.4e-58	81.1
WP_053012060.1\|1724494_1724665_+	DUF551 domain-containing protein	I6R0P9	Salmonella_phage	2.8e-14	48.2
WP_155967627.1\|1724666_1725008_+	hypothetical protein	NA	NA	NA	NA
WP_053012062.1\|1725009_1725381_+	hypothetical protein	F1C5E3	Cronobacter_phage	2.2e-35	61.3
WP_155967630.1\|1725377_1725752_+	hypothetical protein	NA	NA	NA	NA
WP_155967633.1\|1725809_1726553_+	DNA breaking-rejoining protein	G0ZNE6	Cronobacter_phage	2.8e-58	55.4
WP_155967636.1\|1726605_1727286_+	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.0e-67	54.8
WP_155967639.1\|1727331_1730577_+	tape measure protein	R9TMK1	Aeromonas_phage	3.0e-96	38.1
WP_155967642.1\|1730573_1731047_+	hypothetical protein	B1GS45	Salmonella_phage	1.5e-44	51.6
WP_155967644.1\|1731046_1731517_+	DUF1833 domain-containing protein	B1GS46	Salmonella_phage	1.7e-37	46.8
WP_155967647.1\|1731552_1731945_+	peptidoglycan endopeptidase	F1C5F2	Cronobacter_phage	2.0e-31	46.8
WP_155967650.1\|1731931_1734427_+	MoaD/ThiS family protein	A0A1B1W274	Salmonella_phage	9.1e-218	48.8
WP_155967653.1\|1734485_1736213_+	hypothetical protein	A0A0A0YWB2	Escherichia_phage	1.0e-42	50.3

DBSCAN-SWA_3

1928736 : 2055088

143

Pseudomonas_phage(15.19%)

transposase,plate,tRNA,portal,protease,tail,head,holin,terminase,integrase

attL 1935716:1935732|attR 2066463:2066479

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005182371.1\|1928736_1929216_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_032905741.1\|1929496_1930306_-	conjugal transfer protein TraB	NA	NA	NA	NA
WP_005182382.1\|1930492_1933234_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	2.4e-110	36.3
WP_005182384.1\|1933441_1933918_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_005182387.1\|1933978_1934428_-	NfeD family protein	NA	NA	NA	NA
WP_004704953.1\|1934430_1935345_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_032905626.1\|1935539_1936394_-	co-chaperone YbbN	NA	NA	NA	NA
1935716:1935732	attL	NA	NA	NA	NA
WP_005182395.1\|1936474_1937251_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_072088785.1\|1937424_1938063_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_005182403.1\|1938030_1938717_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-33	34.7
WP_032905628.1\|1938713_1941146_+	ABC transporter permease	NA	NA	NA	NA
WP_032905629.1\|1941214_1942279_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_005182416.1\|1942275_1942815_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_005182417.1\|1942990_1943713_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_005182430.1\|1943723_1944218_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_005182433.1\|1944488_1945874_+\|tRNA	cysteine--tRNA ligase	A0A0G2Y344	Acanthamoeba_polyphaga_mimivirus	2.5e-39	26.8
WP_005182436.1\|1946023_1946236_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_005182439.1\|1946250_1947117_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	9.0e-32	34.6
WP_053011649.1\|1947572_1948760_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.1e-131	56.7
WP_143715353.1\|1949173_1950076_+	hypothetical protein	NA	NA	NA	NA
WP_053011647.1\|1950244_1950451_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.1e-07	45.3
WP_053011646.1\|1950559_1951180_+	hypothetical protein	A0A0P0J0J7	Acinetobacter_phage	2.9e-24	39.7
WP_053011706.1\|1951887_1952082_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_053011705.1\|1952236_1952533_+	hypothetical protein	NA	NA	NA	NA
WP_053011644.1\|1952525_1953320_+	ORF6N domain-containing protein	F1C5A3	Cronobacter_phage	1.6e-43	44.3
WP_032905635.1\|1953312_1953510_+	hypothetical protein	NA	NA	NA	NA
WP_032905636.1\|1953487_1953658_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_032905637.1\|1953660_1953864_+	hypothetical protein	NA	NA	NA	NA
WP_032898470.1\|1953977_1954373_+	hypothetical protein	NA	NA	NA	NA
WP_032905638.1\|1954369_1957045_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	9.1e-232	48.5
WP_080995057.1\|1957096_1958146_+	hypothetical protein	A0A1B5FPA6	Escherichia_phage	9.5e-68	50.2
WP_032905639.1\|1958407_1958833_+	antitermination protein	S5M7R9	Escherichia_phage	5.6e-35	57.1
WP_032905640.1\|1958982_1960029_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A167R6J9	Powai_lake_megavirus	5.3e-18	53.7
WP_032905642.1\|1960012_1960789_-	isocitrate lyase/phosphoenolpyruvate mutase family protein	NA	NA	NA	NA
WP_005182474.1\|1961252_1961471_+	hypothetical protein	NA	NA	NA	NA
WP_032905644.1\|1961668_1962046_-	hypothetical protein	NA	NA	NA	NA
WP_032905646.1\|1962146_1962479_-	hypothetical protein	NA	NA	NA	NA
WP_032905648.1\|1962769_1963039_+	hypothetical protein	NA	NA	NA	NA
WP_005182483.1\|1963611_1963986_+	hypothetical protein	A0A1S5NRL1	Burkholderia_phage	5.7e-07	40.8
WP_032905650.1\|1963972_1964266_+\|holin	phage holin family protein	A4PE35	Ralstonia_virus	1.5e-07	35.2
WP_032905651.1\|1964258_1964651_+	M15 family metallopeptidase	E7C9S9	Salmonella_phage	5.5e-37	60.8
WP_005182489.1\|1964668_1965169_+	DUF2514 family protein	Q7Y3V2	Yersinia_phage	3.3e-71	86.1
WP_032905653.1\|1965193_1965394_+	hypothetical protein	NA	NA	NA	NA
WP_005182502.1\|1965895_1966138_+	hypothetical protein	NA	NA	NA	NA
WP_005182505.1\|1966283_1966529_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.5e-11	54.1
WP_032905655.1\|1966905_1967445_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	5.6e-56	64.9
WP_005182509.1\|1967444_1969547_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	3.1e-304	74.5
WP_032905657.1\|1969543_1969759_+	hypothetical protein	K7PMB5	Enterobacterial_phage	2.0e-20	72.9
WP_005182511.1\|1969758_1971240_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	3.6e-198	68.4
WP_032905659.1\|1971202_1973224_+\|protease	Clp protease ClpP	K7PGT6	Enterobacteria_phage	2.0e-279	74.5
WP_005182518.1\|1973306_1973633_+	DUF2190 family protein	Q9EYD5	Enterobacteria_phage	4.3e-27	63.6
WP_032905660.1\|1973625_1973901_+	DNA breaking-rejoining protein	Q8VNN4	Enterobacteria_phage	4.6e-14	42.9
WP_005182524.1\|1973912_1974467_+\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	8.9e-49	54.7
WP_032905662.1\|1974463_1974868_+\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	2.6e-42	61.4
WP_032905664.1\|1975428_1975848_+\|tail	phage tail protein	F1C576	Cronobacter_phage	6.7e-33	57.0
WP_032905666.1\|1975847_1976129_+	DUF4035 domain-containing protein	K7P7L5	Enterobacteria_phage	4.1e-18	53.8
WP_053011643.1\|1976164_1979479_+	tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	2.5e-58	26.6
WP_032905668.1\|1979478_1979943_+	hypothetical protein	A0A286S298	Klebsiella_phage	2.0e-49	58.8
WP_032905670.1\|1979939_1980422_+	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	6.3e-59	69.4
WP_032905671.1\|1980432_1980813_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.1e-58	82.5
WP_032905673.1\|1980809_1983890_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	54.8
WP_005182544.1\|1983932_1985849_+	hypothetical protein	A0A291AXF7	Shigella_phage	9.3e-29	43.4
WP_050413728.1\|1985899_1986541_-	acyltransferase	NA	NA	NA	NA
WP_072103860.1\|1987229_1988222_+	adhesin	NA	NA	NA	NA
WP_032905675.1\|1988437_1988647_+	fumarate hydratase FumD	NA	NA	NA	NA
WP_005182549.1\|1988686_1989619_-	hypothetical protein	K7PGT0	Enterobacteria_phage	1.7e-97	57.8
WP_032905676.1\|1989615_1990089_-	hypothetical protein	K7PLT9	Enterobacteria_phage	3.4e-49	55.3
WP_005182553.1\|1990580_1990826_-	DinI-like family protein	K7PLW4	Enterobacteria_phage	2.9e-12	46.2
WP_032905681.1\|1990965_1991277_+	hypothetical protein	NA	NA	NA	NA
WP_032905685.1\|1992093_1992426_+	hypothetical protein	NA	NA	NA	NA
WP_053011702.1\|1992448_1993894_-	hypothetical protein	A8CG94	Salmonella_phage	4.7e-33	28.3
WP_005182556.1\|1993910_1994837_-	glycosyltransferase family 2 protein	F1C5B0	Cronobacter_phage	1.8e-147	83.9
WP_032905686.1\|1994833_1995199_-	GtrA family protein	F1C5B1	Cronobacter_phage	8.4e-40	69.2
WP_050413729.1\|1996296_1996560_+	hypothetical protein	G9L6E4	Escherichia_phage	1.7e-21	59.8
WP_126286793.1\|1997066_1997687_+	hypothetical protein	G9L6E4	Escherichia_phage	1.6e-78	70.9
WP_032905688.1\|1997767_1998901_+	acyltransferase	G9L6E5	Escherichia_phage	3.5e-108	54.4
WP_005182566.1\|1999245_2001534_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.2e-59	31.2
WP_032905690.1\|2002160_2003030_-	YjjW family glycine radical enzyme activase	NA	NA	NA	NA
WP_005182569.1\|2003001_2004558_-	YjjI family glycine radical enzyme	NA	NA	NA	NA
WP_005182570.1\|2004951_2005206_-	membrane protein	NA	NA	NA	NA
WP_155967659.1\|2005208_2006567_-	melibiose:sodium transporter MelB	NA	NA	NA	NA
WP_025377230.1\|2006827_2007352_-	hypothetical protein	A0A0C4UQZ2	Shigella_phage	4.8e-12	28.0
WP_025377231.1\|2007596_2007818_+	transcriptional regulator	M1PVU4	Vibrio_phage	4.5e-20	73.9
WP_155967662.1\|2007814_2009866_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A2D1GNK9	Pseudomonas_phage	6.4e-177	49.2
WP_005276797.1\|2009908_2010799_+	ATPase	A0A2D1GNS0	Pseudomonas_phage	1.4e-80	52.2
WP_012303416.1\|2010809_2011043_+	hypothetical protein	A0A2D1GNI5	Pseudomonas_phage	1.5e-18	55.3
WP_049610289.1\|2011049_2011250_+	hypothetical protein	NA	NA	NA	NA
WP_049610290.1\|2011239_2011878_+	DUF3164 family protein	A4JWM8	Burkholderia_virus	3.4e-60	55.5
WP_025377236.1\|2011879_2012071_+	hypothetical protein	NA	NA	NA	NA
WP_155967665.1\|2012154_2012868_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	2.0e-24	33.8
WP_155967667.1\|2012867_2013365_+	ANR family transcriptional regulator	NA	NA	NA	NA
WP_155967670.1\|2013361_2013583_+	hypothetical protein	A0A2D1GNI2	Pseudomonas_phage	7.4e-15	57.6
WP_050148599.1\|2013579_2013822_+	hypothetical protein	NA	NA	NA	NA
WP_155967673.1\|2013811_2014354_+	hypothetical protein	J9Q748	Salmonella_phage	2.7e-50	53.5
WP_155967677.1\|2014350_2014563_+	hypothetical protein	NA	NA	NA	NA
WP_050148608.1\|2014555_2014948_+	hypothetical protein	NA	NA	NA	NA
WP_155967988.1\|2014949_2015414_+	hypothetical protein	NA	NA	NA	NA
WP_057628149.1\|2015398_2015800_+	regulatory protein GemA	A0A2D1GNN4	Pseudomonas_phage	1.9e-29	52.7
WP_155967991.1\|2015799_2016234_+	hypothetical protein	A0A2D1GNW5	Pseudomonas_phage	3.4e-27	47.0
WP_155967680.1\|2016243_2016768_+	hypothetical protein	NA	NA	NA	NA
WP_155967683.1\|2016931_2017474_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	1.6e-74	72.5
WP_155967685.1\|2017470_2017731_+	hypothetical protein	A0A2D1GNW8	Pseudomonas_phage	1.8e-12	46.5
WP_155967994.1\|2017708_2018296_+	hypothetical protein	A0A2D1GNR2	Pseudomonas_phage	6.8e-23	36.3
WP_155967691.1\|2018292_2018535_+	hypothetical protein	NA	NA	NA	NA
WP_155967694.1\|2018531_2018819_+	hypothetical protein	NA	NA	NA	NA
WP_155967697.1\|2018821_2019322_+	DUF1804 family protein	A0A0A1IX73	Pseudomonas_phage	1.9e-50	56.6
WP_032898422.1\|2019314_2019512_+	hypothetical protein	NA	NA	NA	NA
WP_155967700.1\|2019516_2021172_+\|terminase	phage terminase large subunit	H6V8N6	Pseudomonas_phage	3.0e-209	64.3
WP_155967703.1\|2021173_2022754_+	DUF935 family protein	A0A0M5MS00	Ralstonia_phage	4.7e-127	47.1
WP_155967997.1\|2022773_2024003_+\|head	phage head morphogenesis protein	A0A0M4UTA3	Ralstonia_phage	7.5e-64	38.9
WP_155967707.1\|2024002_2024554_+	phage virion morphogenesis protein	A0A2H4J9E5	uncultured_Caudovirales_phage	3.9e-20	35.0
WP_155967710.1\|2024787_2025891_+	hypothetical protein	A0A2D1GNS3	Pseudomonas_phage	3.8e-59	42.2
WP_155967714.1\|2025887_2026286_+	hypothetical protein	J9RWG0	Pseudomonas_phage	3.4e-18	43.5
WP_050148646.1\|2026297_2027206_+\|head	head protein	A0A2H4J778	uncultured_Caudovirales_phage	2.3e-110	64.6
WP_050152542.1\|2027205_2027649_+	hypothetical protein	NA	NA	NA	NA
WP_050148652.1\|2027660_2028089_+	DUF1320 domain-containing protein	A0A1B0T6F3	Thiobacimonas_phage	2.8e-10	35.5
WP_155967717.1\|2028085_2028742_+	DUF1834 family protein	NA	NA	NA	NA
WP_155968001.1\|2028728_2028983_+	DUF2635 domain-containing protein	B7SDP7	Haemophilus_phage	1.1e-06	48.1
WP_155967720.1\|2028969_2030391_+\|tail	phage tail protein	B7SDP8	Haemophilus_phage	3.8e-104	46.5
WP_032898430.1\|2030403_2030781_+	hypothetical protein	F6MIK8	Haemophilus_phage	1.9e-34	62.1
WP_155967723.1\|2030780_2031167_+	hypothetical protein	NA	NA	NA	NA
WP_155967726.1\|2031304_2033473_+\|tail	phage tail tape measure protein	A0A0M3LPB6	Mannheimia_phage	2.1e-93	39.9
WP_155967729.1\|2033469_2034786_+	multidrug DMT transporter permease	A0A2H4JGT4	uncultured_Caudovirales_phage	1.4e-44	30.0
WP_155967732.1\|2034769_2036002_+\|tail	phage tail protein	A0A2H4J9E6	uncultured_Caudovirales_phage	3.3e-72	36.5
WP_155967735.1\|2035991_2036642_+\|plate	phage baseplate assembly protein V	A0A0M3LPA3	Mannheimia_phage	7.0e-53	51.3
WP_155968004.1\|2036702_2037047_+	hypothetical protein	A0A2H4JDR8	uncultured_Caudovirales_phage	2.8e-29	63.1
WP_155967738.1\|2037046_2038108_+\|tail	phage tail protein	A0A0M3LQN4	Mannheimia_phage	1.8e-74	46.0
WP_155967741.1\|2038104_2038674_+	DUF2313 domain-containing protein	F6MIL7	Haemophilus_phage	3.5e-32	39.0
WP_155967744.1\|2039830_2040298_+	hypothetical protein	NA	NA	NA	NA
WP_155967747.1\|2040427_2041192_+	DNA adenine methylase	A2I2Y7	Vibrio_virus	2.4e-97	65.9
WP_005182573.1\|2041424_2042774_-	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA
WP_005182576.1\|2043044_2043971_+	transcriptional regulator MelR	NA	NA	NA	NA
WP_005182577.1\|2044277_2045558_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_005182579.1\|2045632_2046883_-	hypothetical protein	NA	NA	NA	NA
WP_032905692.1\|2047096_2047507_-	hypothetical protein	NA	NA	NA	NA
WP_005182582.1\|2048070_2048280_-	hypothetical protein	NA	NA	NA	NA
WP_032905696.1\|2048405_2048795_-	M15 family metallopeptidase	A0A2I6PFM8	Proteus_phage	2.3e-35	54.9
WP_032905698.1\|2048796_2049102_-\|holin	holin	NA	NA	NA	NA
WP_080547895.1\|2049518_2049908_-	hypothetical protein	NA	NA	NA	NA
WP_126286792.1\|2050331_2050571_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_005182587.1\|2051099_2052539_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_105165850.1\|2052928_2054380_+\|protease	serralysin family metalloprotease	NA	NA	NA	NA
WP_032905703.1\|2054758_2055088_+\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
2066463:2066479	attR	NA	NA	NA	NA

DBSCAN-SWA_4

3213793 : 3225123

BeAn_58058_virus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005182841.1\|3213793_3216181_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	4.3e-07	25.8
WP_005182843.1\|3216194_3217178_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	3.8e-34	38.0
WP_004706556.1\|3217645_3218002_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004713020.1\|3218039_3218237_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_011816226.1\|3218332_3218884_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.4e-16	33.7
WP_005182845.1\|3218887_3220816_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	9.7e-127	36.8
WP_032905797.1\|3221268_3221481_+	KTSC domain-containing protein	A0A0K1LMB5	Caulobacter_phage	3.4e-09	43.5
WP_005182848.1\|3221592_3222306_-	DUF554 domain-containing protein	NA	NA	NA	NA
WP_005182850.1\|3222449_3223256_-	IclR family transcriptional regulator	NA	NA	NA	NA
WP_005182852.1\|3223596_3225123_+	sugar ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.8e-12	26.0

DBSCAN-SWA_5

3899522 : 3937082

Salmonella_phage(31.71%)

holin,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_155967793.1\|3899522_3899948_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	8.3e-39	54.9
WP_155967796.1\|3899952_3900882_-	hypothetical protein	A0A0M3ULD8	Salmonella_phage	9.1e-14	29.9
WP_155967799.1\|3900874_3901549_-	DUF2612 domain-containing protein	A9YX13	Burkholderia_phage	2.1e-52	47.9
WP_155967802.1\|3901548_3902736_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	5.8e-114	56.6
WP_145547090.1\|3902736_3903090_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	3.5e-43	72.6
WP_155967805.1\|3903091_3903844_-	translation initiation factor IF-2	A0A2H4J8H6	uncultured_Caudovirales_phage	6.1e-93	66.4
WP_050319619.1\|3903970_3904360_-	hypothetical protein	NA	NA	NA	NA
WP_050875358.1\|3904404_3904746_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.5e-19	50.0
WP_155967808.1\|3904745_3905807_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	2.2e-136	66.1
WP_050319622.1\|3905809_3906115_-	hypothetical protein	A0A0M4R5B7	Salmonella_phage	7.6e-26	55.4
WP_050319623.1\|3906111_3906738_-	hypothetical protein	A0A0M3ULD5	Salmonella_phage	4.2e-63	65.8
WP_155967811.1\|3906737_3908744_-	transglycosylase SLT domain-containing protein	A0A0M4REK7	Salmonella_phage	2.9e-238	62.7
WP_069018196.1\|3908740_3908911_-	lytic transglycosylase	A0A2H4J1A2	uncultured_Caudovirales_phage	3.1e-05	42.6
WP_050319672.1\|3908922_3909321_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.0e-34	57.4
WP_049526038.1\|3909331_3909772_-	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	6.2e-53	71.2
WP_155967814.1\|3909783_3911259_-	DUF3383 family protein	A0A0P0I492	Acinetobacter_phage	5.3e-149	55.5
WP_049617029.1\|3911261_3911804_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.1e-51	55.8
WP_155967817.1\|3911796_3912183_-\|head,tail	head-tail adaptor	A0A2H4J1A4	uncultured_Caudovirales_phage	4.7e-49	77.4
WP_155967820.1\|3912182_3912689_-	hypothetical protein	A9YX26	Burkholderia_phage	1.8e-16	34.9
WP_049648418.1\|3912685_3913093_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.2e-32	53.3
WP_049648419.1\|3913061_3913445_-	hypothetical protein	NA	NA	NA	NA
WP_155967823.1\|3913483_3914431_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	2.3e-105	59.2
WP_083159306.1\|3914441_3914945_-	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	2.4e-29	46.4
WP_155967825.1\|3914955_3916221_-	DUF2213 domain-containing protein	A0A2H4J159	uncultured_Caudovirales_phage	2.9e-71	44.0
WP_155968007.1\|3916482_3917016_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	2.7e-47	55.8
WP_049617022.1\|3917086_3918556_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	5.6e-151	54.6
WP_155967828.1\|3918580_3920203_-	TerL protein	A9YWZ6	Burkholderia_phage	2.9e-233	72.8
WP_053011843.1\|3920557_3921025_-	DUF2280 domain-containing protein	H9C190	Pectobacterium_phage	6.5e-53	68.0
WP_155967831.1\|3921057_3921693_-	hypothetical protein	I6S676	Salmonella_phage	2.0e-84	70.4
WP_155967602.1\|3921809_3922235_-	hypothetical protein	NA	NA	NA	NA
WP_155967834.1\|3922335_3923022_-	hypothetical protein	A0A192Y918	Salmonella_phage	2.9e-110	86.4
WP_155967837.1\|3923567_3923783_+	KTSC domain-containing protein	NA	NA	NA	NA
WP_155967840.1\|3923936_3924329_-	exotoxin	U5P0U9	Shigella_phage	2.3e-11	36.3
WP_155967843.1\|3924313_3924796_-	glycoside hydrolase family protein	A0A2H4JCH1	uncultured_Caudovirales_phage	8.5e-56	64.2
WP_042806445.1\|3924773_3924974_-\|holin	holin	A0A1V0E5H9	Salmonella_phage	2.7e-16	63.5
WP_155967846.1\|3925335_3925905_-	hypothetical protein	NA	NA	NA	NA
WP_145547223.1\|3926166_3926931_-	antitermination protein	A0A286N2Q2	Klebsiella_phage	2.8e-61	47.7
WP_087785197.1\|3926947_3928309_-	helicase	Q8W640	Enterobacteria_phage	4.5e-118	50.4
WP_155967849.1\|3928305_3929181_-	AAA family ATPase	K7PLU3	Enterobacteria_phage	9.0e-64	45.0
WP_050156813.1\|3929177_3930059_-	hypothetical protein	A0A067ZIA1	Vibrio_phage	1.0e-30	37.3
WP_050133291.1\|3930055_3930880_-	transporter	Q8W644	Enterobacteria_phage	2.4e-114	70.8
WP_087770142.1\|3930899_3931109_-	transcriptional regulator	U5P445	Shigella_phage	5.4e-07	50.9
WP_087784991.1\|3931227_3931980_+	helix-turn-helix transcriptional regulator	A0A2I6PIE7	Escherichia_phage	1.6e-29	43.4
WP_155967852.1\|3932182_3932596_+	hypothetical protein	NA	NA	NA	NA
WP_087784989.1\|3932599_3932794_+	hypothetical protein	NA	NA	NA	NA
WP_155967854.1\|3932793_3933072_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_155967857.1\|3933068_3933272_+	hypothetical protein	NA	NA	NA	NA
WP_050144527.1\|3933264_3933459_+	hypothetical protein	NA	NA	NA	NA
WP_050311096.1\|3933451_3933853_+	hypothetical protein	NA	NA	NA	NA
WP_155967860.1\|3933854_3934280_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	1.2e-16	39.5
WP_155967863.1\|3934367_3934727_+	hypothetical protein	NA	NA	NA	NA
WP_155967866.1\|3934723_3934912_+	hypothetical protein	NA	NA	NA	NA
WP_155967869.1\|3935126_3935621_+	hypothetical protein	NA	NA	NA	NA
WP_050127326.1\|3935630_3935912_+	hypothetical protein	NA	NA	NA	NA
WP_155967872.1\|3935908_3936742_+	transcriptional regulator	I2G814	Salmonella_phage	2.0e-07	33.0
WP_155967874.1\|3936738_3936864_+	sodium:solute symporter	NA	NA	NA	NA
WP_050127323.1\|3936860_3937082_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	2.0e-12	50.0

DBSCAN-SWA_6

4026502 : 4035423

Escherichia_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032905954.1\|4026502_4028926_+	dimethyl sulfoxide reductase subunit A	A0A077SK27	Escherichia_phage	5.6e-265	55.9
WP_005183646.1\|4028937_4029555_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	3.4e-89	70.2
WP_005183647.1\|4029556_4030333_+	diguanylate cyclase	A0A077SK59	Escherichia_phage	7.8e-43	42.2
WP_005183648.1\|4030437_4031052_+	molecular chaperone	A0A077SLS7	Escherichia_phage	1.9e-44	48.7
WP_032905955.1\|4031048_4031612_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_005183650.1\|4031708_4032140_+	hypothetical protein	Q7Y3V7	Yersinia_phage	6.7e-28	49.3
WP_098057507.1\|4032648_4032723_+	membrane protein YpdK	NA	NA	NA	NA
WP_005183662.1\|4032781_4033306_-	cytochrome b	A0A0U2QLA7	Escherichia_phage	7.6e-26	51.0
WP_005183665.1\|4033481_4034717_-	alanine transaminase	NA	NA	NA	NA
WP_005183667.1\|4034853_4035423_-	GNAT family N-acetyltransferase	D0R097	Streptococcus_phage	2.6e-11	29.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046294

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection