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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046310 Lactobacillus jensenii strain FDAARGOS_749 chromosome, complete genome 1 crisprs DinG,csn2,cas2,cas1,cas9,cas3,DEDDh 0 6 3 0

Results visualization

1. NZ_CP046310
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046310_1 661594-662091 TypeII NA
7 spacers
csn2,cas2,cas1,cas9

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046310_1 1.2|661696|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661696-661725 30 EU871039 Lactobacillus phage Lv-1, complete genome 7412-7441 2 0.933
NZ_CP046310_1 1.6|661960|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661960-661989 30 MF063068 Pseudomonas phage Noxifer, complete genome 7435-7464 6 0.8
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 MT773555 Myoviridae sp. isolate BML_3 genomic sequence 25550-25579 6 0.8
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 KJ194582 Mycobacterium phage Hawkeye, complete genome 46305-46334 6 0.8
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 KJ194582 Mycobacterium phage Hawkeye, complete genome 46314-46343 6 0.8
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP011156 Bacillus cereus strain HN001 plasmid pRML01, complete sequence 257255-257284 6 0.8
NZ_CP046310_1 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661630-661659 30 NZ_CP037749 Campylobacter helveticus strain 2013D-9613 plasmid unnamed1 1407-1436 7 0.767
NZ_CP046310_1 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661630-661659 30 NZ_CP037749 Campylobacter helveticus strain 2013D-9613 plasmid unnamed1 2756-2785 7 0.767
NZ_CP046310_1 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661630-661659 30 NZ_CP020479 Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence 64636-64665 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_003078 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence 94929-94958 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP019586 Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence 97556-97585 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021799 Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence 162466-162495 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021828 Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence 1344919-1344948 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021823 Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence 1461355-1461384 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021795 Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence 1010972-1011001 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021806 Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence 1049769-1049798 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP019484 Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence 304696-304725 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP019487 Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence 92292-92321 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_020560 Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence 94929-94958 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_019849 Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence 1657328-1657357 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_017326 Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence 1597514-1597543 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP009146 Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence 1582153-1582182 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_018701 Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence 1630014-1630043 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021802 Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence 228808-228837 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021820 Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence 293751-293780 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021831 Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence 213511-213540 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021814 Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence 1525622-1525651 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021810 Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence 753911-753940 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP021218 Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence 118619-118648 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP026527 Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence 1640414-1640443 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_021709 Alteromonas mediterranea 615 plasmid unnamed, complete sequence 167021-167050 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP010096 Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMBLin15, complete sequence 5130-5159 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_006945 Bacillus phage GIL16c, complete genome 5123-5152 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 AY701338 Bacillus thuringiensis phage GIL16c, complete genome 5123-5152 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_047789 Pectobacterium phage PP74, complete genome 1269-1298 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP014283 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence 407604-407633 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP032314 Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence 23026-23055 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_CP032614 Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence 96740-96769 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 104947-104976 7 0.767
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 MN855782 Bacteriophage sp. isolate 43, complete genome 16875-16904 7 0.767
NZ_CP046310_1 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661630-661659 30 NZ_CP038864 Campylobacter jejuni strain SCJK2 plasmid p2, complete sequence 16558-16587 8 0.733
NZ_CP046310_1 1.3|661762|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661762-661791 30 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 105669-105698 8 0.733
NZ_CP046310_1 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 662026-662055 30 NZ_AP014825 Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence 47973-48002 8 0.733
NZ_CP046310_1 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661630-661659 30 NZ_CP020032 Geobacillus thermodenitrificans strain T12 plasmid pGeo12b, complete sequence 29644-29673 9 0.7
NZ_CP046310_1 1.5|661894|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT 661894-661923 30 AP014503 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces 4362-4391 9 0.7

1. spacer 1.2|661696|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to EU871039 (Lactobacillus phage Lv-1, complete genome) position: , mismatch: 2, identity: 0.933

attgaaattactgcagctcttttaggcgct	CRISPR spacer
attaaaattactgcagctcttttaggtgct	Protospacer
***.**********************.***

2. spacer 1.6|661960|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to MF063068 (Pseudomonas phage Noxifer, complete genome) position: , mismatch: 6, identity: 0.8

tgcttttcctaaccagctcaagaaacctga	CRISPR spacer
cgcatttcctaaccagctcaataaacgcgg	Protospacer
.** ***************** **** .*.

3. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 6, identity: 0.8

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcttcttcctcgtcttcctcgtcttcctca	Protospacer
*..**********.********.**** * 

4. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to KJ194582 (Mycobacterium phage Hawkeye, complete genome) position: , mismatch: 6, identity: 0.8

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcgtcttcctcgtcttcctcgtcttcctca	Protospacer
*. **********.********.**** * 

5. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to KJ194582 (Mycobacterium phage Hawkeye, complete genome) position: , mismatch: 6, identity: 0.8

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcgtcttcctcgtcttcctcgtcttcctcg	Protospacer
*. **********.********.**** * 

6. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 6, identity: 0.8

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcgtcttcctcgtcttcctcgtcttcctcg	Protospacer
*. **********.********.**** * 

7. spacer 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037749 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

caggctttatcaaagaaaaagcaactttta	CRISPR spacer
tagaatttatcaaagaaaaagaagctttag	Protospacer
.**. **************** *.**** .

8. spacer 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037749 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed1) position: , mismatch: 7, identity: 0.767

caggctttatcaaagaaaaagcaactttta	CRISPR spacer
tagaatttatcaaagaaaaagaagctttag	Protospacer
.**. **************** *.**** .

9. spacer 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020479 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence) position: , mismatch: 7, identity: 0.767

caggctttatcaaagaaaaagcaactttta	CRISPR spacer
tagaatttatcaaagaaaaagaagctttag	Protospacer
.**. **************** *.**** .

10. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_003078 (Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

11. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019586 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

12. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021799 (Sinorhizobium meliloti strain USDA1106 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

13. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021828 (Sinorhizobium meliloti strain KH35c plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

14. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021823 (Sinorhizobium meliloti strain KH46 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

15. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021795 (Sinorhizobium meliloti strain USDA1157 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

16. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021806 (Sinorhizobium meliloti strain T073 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

17. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019484 (Sinorhizobium meliloti strain B401 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

18. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019487 (Sinorhizobium meliloti strain B399 plasmid pSym, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

19. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_020560 (Sinorhizobium meliloti 2011 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

20. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_019849 (Sinorhizobium meliloti GR4 plasmid pRmeGR4d, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

21. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_017326 (Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

22. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009146 (Sinorhizobium meliloti strain RMO17 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

23. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

24. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

25. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021820 (Sinorhizobium meliloti strain M162 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

26. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021831 (Sinorhizobium meliloti strain HM006 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

27. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021814 (Sinorhizobium meliloti strain M270 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

28. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

29. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

30. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026527 (Sinorhizobium meliloti strain AK21 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttatcttcctcgttttcctcgtattggcac	Protospacer
** ******************* **    .

31. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_021709 (Alteromonas mediterranea 615 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcatcttcctcgtcttcctcgtcttcctga	Protospacer
*. **********.********.****   

32. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010096 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMBLin15, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
atctcttcctcttcttcctcgtttttctta	Protospacer
 ********** *.***********.* . 

33. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_006945 (Bacillus phage GIL16c, complete genome) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
atctcttcctcttcttcctcgtttttctta	Protospacer
 ********** *.***********.* . 

34. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to AY701338 (Bacillus thuringiensis phage GIL16c, complete genome) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
atctcttcctcttcttcctcgtttttctta	Protospacer
 ********** *.***********.* . 

35. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_047789 (Pectobacterium phage PP74, complete genome) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcgtcttcctcgtcttcctcgtcttccttc	Protospacer
*. **********.********.**** ..

36. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcggcttcctcgtcttcctcgtcttcctcg	Protospacer
*.  *********.********.**** * 

37. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032314 (Pannonibacter phragmitetus BB plasmid p.BB_2, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcattggcctcgctttcctcgttttcggct	Protospacer
*. *.  *****.************* ***

38. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcggcttcctcgtcttcctcgtcttcctcg	Protospacer
*.  *********.********.**** * 

39. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
tcgtcttcctcgtcttcctcgttgtcggac	Protospacer
*. **********.********* ** * .

40. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to MN855782 (Bacteriophage sp. isolate 43, complete genome) position: , mismatch: 7, identity: 0.767

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
ttctcttcctcgctttcctccttcacatca	Protospacer
************.******* **. *  * 

41. spacer 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038864 (Campylobacter jejuni strain SCJK2 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.733

caggctttatcaaagaaaaagcaactttta	CRISPR spacer
ctaaagctatcaaagagaaagcaacttttt	Protospacer
* ..  .*********.************ 

42. spacer 1.3|661762|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 8, identity: 0.733

atgagttactacctgaaagagctaaaacga	CRISPR spacer
tacagttactacctgaaagagagaaaagac	Protospacer
   ******************  **** . 

43. spacer 1.7|662026|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014825 (Geminocystis sp. NIES-3709 plasmid pGM3709_04, complete sequence) position: , mismatch: 8, identity: 0.733

ttctcttcctcgttttcctcgttttccgct	CRISPR spacer
taaactttctctttttcctcgttttccttg	Protospacer
*   ***.*** *************** . 

44. spacer 1.1|661630|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020032 (Geobacillus thermodenitrificans strain T12 plasmid pGeo12b, complete sequence) position: , mismatch: 9, identity: 0.7

caggctttatcaaagaaaaagcaactttta	CRISPR spacer
agaaaagcatcaaagaaaaagcaaccttta	Protospacer
 ...   .*****************.****

45. spacer 1.5|661894|30|NZ_CP046310|PILER-CR,CRISPRCasFinder,CRT matches to AP014503 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S42-C30, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 9, identity: 0.7

agttgctacaggtgatttatttaatgctgg	CRISPR spacer
ccttggtacaggtgatttattgaatttaat	Protospacer
  *** *************** *** . . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 721283 : 733115 9 Klosneuvirus(14.29%) tRNA NA
DBSCAN-SWA_2 776389 : 786663 8 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_3 1021178 : 1031462 9 Staphylococcus_phage(37.5%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage