Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046326 Corynebacterium xerosis strain FDAARGOS_674 plasmid unnamed4 0 crisprs NA 0 0 0 0
NZ_CP046324 Corynebacterium xerosis strain FDAARGOS_674 plasmid unnamed2 0 crisprs NA 0 0 0 0
NZ_CP046325 Corynebacterium xerosis strain FDAARGOS_674 plasmid unnamed3 0 crisprs NA 0 0 0 0
NZ_CP046322 Corynebacterium xerosis strain FDAARGOS_674 chromosome, complete genome 5 crisprs DEDDh,csa3,cas3,DinG,csb1gr7,csb2gr5,csb3,cas1,cas2,WYL 0 2 5 0
NZ_CP046323 Corynebacterium xerosis strain FDAARGOS_674 plasmid unnamed1 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP046322
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046322_1 160354-160455 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046322_2 1398219-1398356 Orphan NA
2 spacers
DEDDh

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046322_3 1846950-1847022 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046322_4 2042641-2042737 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046322_5 2401281-2401676 Unclear NA
5 spacers
cas2,cas1,csb3,cas3,csb2gr5,csb1gr7

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046322_1 1.1|160390|30|NZ_CP046322|CRISPRCasFinder 160390-160419 30 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 627452-627481 6 0.8
NZ_CP046322_1 1.1|160390|30|NZ_CP046322|CRISPRCasFinder 160390-160419 30 NZ_CP015733 Arthrobacter sp. U41 plasmid unnamed1, complete sequence 84666-84695 8 0.733
NZ_CP046322_1 1.1|160390|30|NZ_CP046322|CRISPRCasFinder 160390-160419 30 NZ_LN831789 Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2 73530-73559 8 0.733
NZ_CP046322_1 1.1|160390|30|NZ_CP046322|CRISPRCasFinder 160390-160419 30 NZ_CP022565 Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence 632799-632828 8 0.733
NZ_CP046322_2 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder 1398244-1398274 31 NZ_CP032685 Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence 38628-38658 9 0.71
NZ_CP046322_2 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder 1398244-1398274 31 NZ_CP032690 Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence 38628-38658 9 0.71
NZ_CP046322_2 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder 1398244-1398274 31 NZ_CP049031 Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence 45299-45329 10 0.677

1. spacer 1.1|160390|30|NZ_CP046322|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 6, identity: 0.8

-ttgagcgtggcctcggactccgccttcgcc	CRISPR spacer
ggcaagc-tgggctcggtctccgccttcgcc	Protospacer
  ..*** *** ***** *************

2. spacer 1.1|160390|30|NZ_CP046322|CRISPRCasFinder matches to NZ_CP015733 (Arthrobacter sp. U41 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagcgtggcctcggactccgccttcgcc	CRISPR spacer
tatcccgtgacctcggactccgccgtcggg	Protospacer
*    ****.************** ***  

3. spacer 1.1|160390|30|NZ_CP046322|CRISPRCasFinder matches to NZ_LN831789 (Streptomyces leeuwenhoekii strain type strain (C34 = DSM 42122 = NRRL B-24963) plasmid pSLE2) position: , mismatch: 8, identity: 0.733

ttgagcgtggcctcggactccgccttcgcc	CRISPR spacer
agccgctcggcctcggactccgccttggcg	Protospacer
    ** .****************** ** 

4. spacer 1.1|160390|30|NZ_CP046322|CRISPRCasFinder matches to NZ_CP022565 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK01, complete sequence) position: , mismatch: 8, identity: 0.733

ttgagcgtggcctcggactccgccttcgcc	CRISPR spacer
cgggccgtggcctcggcctcggccttcggg	Protospacer
. *. *********** *** *******  

5. spacer 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 9, identity: 0.71

tcgaggtcgcgtgctttaccacgccgccacc	CRISPR spacer
tcgatgtcgcgagctttaccacgactgagat	Protospacer
**** ****** *********** *   . .

6. spacer 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 9, identity: 0.71

tcgaggtcgcgtgctttaccacgccgccacc	CRISPR spacer
tcgatgtcgcgagctttaccacgactgagat	Protospacer
**** ****** *********** *   . .

7. spacer 2.1|1398244|31|NZ_CP046322|CRISPRCasFinder matches to NZ_CP049031 (Fluviibacterium aquatile strain SC52 plasmid pSC52_3, complete sequence) position: , mismatch: 10, identity: 0.677

tcgaggtcgcgtgctttaccacgccgccacc	CRISPR spacer
aacaggtcgcgtgctataccccgccgggtga	Protospacer
   ************ **** *****     

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 399772 : 456923 49 Gordonia_phage(50.0%) transposase,tRNA NA
DBSCAN-SWA_2 641196 : 659862 18 Corynebacterium_phage(76.92%) terminase,portal NA
DBSCAN-SWA_3 663125 : 672613 17 Gordonia_phage(42.86%) integrase attL 667489:667504|attR 677070:677085
DBSCAN-SWA_4 1839076 : 1897320 51 Agrobacterium_phage(22.22%) transposase,protease NA
DBSCAN-SWA_5 2266355 : 2280391 12 Corynebacterium_phage(40.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage