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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP019712 Staphylococcus aureus strain Tokyo12480 14 crisprs RT,cas3,casR,DEDDh,DinG,csa3,WYL 7 3 12 2

Results visualization

1. NZ_AP019712
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_1 638122-638230 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_2 702755-702866 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_3 755468-755552 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_4 801766-801848 Orphan NA
1 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_5 812714-812872 Unclear NA
2 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_6 874610-874690 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_7 1136791-1136871 Orphan NA
1 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_8 1219954-1220101 Unclear NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_9 1442995-1443078 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_10 1753220-1753353 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_11 1755684-1755766 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_12 1844009-1844098 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_13 2178835-2178985 Orphan NA
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP019712_14 2445173-2445267 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 2497291-2497319 0 1.0
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 248402-248430 0 1.0
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 248460-248488 0 1.0
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 248518-248546 0 1.0
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 2283478-2283506 0 1.0
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 940690-940720 0 1.0
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 1945571-1945601 0 1.0
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 919300-919330 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 248323-248342 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 266545-266564 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 852012-852031 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 919390-919409 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1059780-1059799 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1220102-1220121 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1352449-1352468 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1633565-1633584 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1956117-1956136 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 2075447-2075466 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 2134350-2134369 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 2460536-2460555 0 1.0
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 2730884-2730903 0 1.0
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 874377-874401 0 1.0
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 874258-874286 1 0.966
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 919302-919330 1 0.966
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 851976-852004 1 0.966
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 940690-940718 1 0.966
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 1945571-1945599 1 0.966
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 248402-248432 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 248460-248490 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 248518-248548 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 851976-852006 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 2283478-2283508 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 874256-874286 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 874359-874389 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 2328463-2328493 1 0.968
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 2497289-2497319 1 0.968
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 874271-874309 1 0.974
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 266433-266452 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 801713-801732 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1356894-1356913 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1401707-1401726 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1633451-1633470 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1755588-1755607 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 1902403-1902422 1 0.95
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 2328553-2328572 1 0.95
NZ_AP019712_9 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder 1443021-1443052 32 NZ_AP019712.1 248402-248433 1 0.969
NZ_AP019712_9 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder 1443021-1443052 32 NZ_AP019712.1 248460-248491 1 0.969
NZ_AP019712_9 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder 1443021-1443052 32 NZ_AP019712.1 851976-852007 1 0.969
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 1755632-1755656 1 0.96
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 851964-851988 1 0.96
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 940678-940702 1 0.96
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 874361-874389 2 0.931
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 1136779-1136807 2 0.931
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 2328465-2328493 2 0.931
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 812643-812671 2 0.931
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 NZ_AP019712.1 812698-812726 2 0.931
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 812643-812673 2 0.935
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 812698-812728 2 0.935
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 1356858-1356888 2 0.935
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 1401672-1401702 2 0.935
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 2050051-2050081 2 0.935
NZ_AP019712_4 4.1|801792|31|NZ_AP019712|CRISPRCasFinder 801792-801822 31 NZ_AP019712.1 2731016-2731046 2 0.935
NZ_AP019712_7 7.1|1136815|33|NZ_AP019712|CRISPRCasFinder 1136815-1136847 33 NZ_AP019712.1 2075396-2075428 2 0.939
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 248379-248417 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 248437-248475 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 248495-248533 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 1667475-1667513 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 1945548-1945586 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 2283455-2283493 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 919315-919353 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 2328478-2328516 2 0.949
NZ_AP019712_8 8.1|1219991|39|NZ_AP019712|PILER-CR 1219991-1220029 39 NZ_AP019712.1 2497304-2497342 2 0.949
NZ_AP019712_8 8.2|1220067|20|NZ_AP019712|PILER-CR 1220067-1220086 20 NZ_AP019712.1 49879-49898 2 0.9
NZ_AP019712_9 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder 1443021-1443052 32 NZ_AP019712.1 812698-812729 2 0.938
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 874274-874298 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 919318-919342 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 1136852-1136876 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2432484-2432508 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2497307-2497331 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 248390-248414 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 248448-248472 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 248506-248530 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 1356846-1356870 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 1945559-1945583 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 1956009-1956033 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2050039-2050063 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2283466-2283490 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2294214-2294238 2 0.92
NZ_AP019712_10 10.1|1753252|25|NZ_AP019712|PILER-CR 1753252-1753276 25 NZ_AP019712.1 2731004-2731028 2 0.92

1. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 2497291-2497319, mismatch: 0, identity: 1.0

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaagagaatttcgaaaagaaa	Protospacer
*****************************

2. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 248402-248430, mismatch: 0, identity: 1.0

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaagagaatttcgaaaagaaa	Protospacer
*****************************

3. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 248460-248488, mismatch: 0, identity: 1.0

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaagagaatttcgaaaagaaa	Protospacer
*****************************

4. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 248518-248546, mismatch: 0, identity: 1.0

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaagagaatttcgaaaagaaa	Protospacer
*****************************

5. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 2283478-2283506, mismatch: 0, identity: 1.0

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaagagaatttcgaaaagaaa	Protospacer
*****************************

6. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 940690-940720, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

7. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 1945571-1945601, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

8. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 919300-919330, mismatch: 0, identity: 1.0

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtgttggggccc	Protospacer
*******************************

9. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 248323-248342, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

10. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 266545-266564, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

11. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 852012-852031, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

12. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 919390-919409, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

13. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1059780-1059799, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

14. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1220102-1220121, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

15. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1352449-1352468, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

16. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1633565-1633584, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

17. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1956117-1956136, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

18. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 2075447-2075466, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

19. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 2134350-2134369, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

20. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 2460536-2460555, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

21. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 2730884-2730903, mismatch: 0, identity: 1.0

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaagtt	Protospacer
********************

22. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 874377-874401, mismatch: 0, identity: 1.0

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaaacaa	Protospacer
*************************

23. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 874258-874286, mismatch: 1, identity: 0.966

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacatagagaatttcgaaaagaaa	Protospacer
********* *******************

24. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 919302-919330, mismatch: 1, identity: 0.966

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacacagagaatttcgaaaagaaa	Protospacer
********* *******************

25. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 851976-852004, mismatch: 1, identity: 0.966

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacatagagaatttcgaaaagaaa	Protospacer
********* *******************

26. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 940690-940718, mismatch: 1, identity: 0.966

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacacagagaatttcgaaaagaaa	Protospacer
********* *******************

27. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 1945571-1945599, mismatch: 1, identity: 0.966

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacacagagaatttcgaaaagaaa	Protospacer
********* *******************

28. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 248402-248432, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

29. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 248460-248490, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

30. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 248518-248548, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

31. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 851976-852006, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

32. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 2283478-2283508, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

33. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 874256-874286, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttggggccc	Protospacer
*******************.***********

34. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 874359-874389, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaatcctctgtgttggggccc	Protospacer
**************.****************

35. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 2328463-2328493, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttctttttgaaattctctgtgttggggccc	Protospacer
********.**********************

36. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 2497289-2497319, mismatch: 1, identity: 0.968

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctttgttggggccc	Protospacer
******************* ***********

37. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 874271-874309, mismatch: 1, identity: 0.974

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcgagttggg	Protospacer
*********** ***************************

38. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 266433-266452, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcgagtt	Protospacer
***************.****

39. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 801713-801732, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacgataatgtgcaagtt	Protospacer
*****.**************

40. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1356894-1356913, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcaggtt	Protospacer
****************.***

41. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1401707-1401726, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttataataatgtgcaagtt	Protospacer
****.***************

42. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1633451-1633470, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgcgagtt	Protospacer
***************.****

43. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1755588-1755607, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacattaatgtgcaagtt	Protospacer
****** *************

44. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 1902403-1902422, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataacgtgcaagtt	Protospacer
**********.*********

45. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 2328553-2328572, mismatch: 1, identity: 0.95

cttacaataatgtgcaagtt	CRISPR spacer
cttacgataatgtgcaagtt	Protospacer
*****.**************

46. spacer 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder matches to position: 248402-248433, mismatch: 1, identity: 0.969

tttcttttcgaaattctctgtgttggggccca	CRISPR spacer
tttcttttcgaaattctctttgttggggccca	Protospacer
******************* ************

47. spacer 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder matches to position: 248460-248491, mismatch: 1, identity: 0.969

tttcttttcgaaattctctgtgttggggccca	CRISPR spacer
tttcttttcgaaattctctttgttggggccca	Protospacer
******************* ************

48. spacer 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder matches to position: 851976-852007, mismatch: 1, identity: 0.969

tttcttttcgaaattctctgtgttggggccca	CRISPR spacer
tttcttttcgaaattctctatgttggggccca	Protospacer
*******************.************

49. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 1755632-1755656, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacagacaa	Protospacer
********************.****

50. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 851964-851988, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacagacaa	Protospacer
********************.****

51. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 940678-940702, mismatch: 1, identity: 0.96

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaagcaa	Protospacer
*********************.***

52. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 874361-874389, mismatch: 2, identity: 0.931

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacacagaggatttcgaaaagaaa	Protospacer
********* ****.**************

53. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 1136779-1136807, mismatch: 2, identity: 0.931

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacaaaaagaatttcgaatagaaa	Protospacer
***********.*********** *****

54. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 2328465-2328493, mismatch: 2, identity: 0.931

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacacagagaatttcaaaaagaaa	Protospacer
********* **********.********

55. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 812643-812671, mismatch: 2, identity: 0.931

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacatagagaatttcgaaatgaaa	Protospacer
********* ************** ****

56. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to position: 812698-812726, mismatch: 2, identity: 0.931

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
gccccaacatagagaatttcgaaatgaaa	Protospacer
********* ************** ****

57. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 812643-812673, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

58. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 812698-812728, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcatttcgaaattctctatgttggggccc	Protospacer
**** **************.***********

59. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 1356858-1356888, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcggaattctctgtgttggagccc	Protospacer
**********.***************.****

60. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 1401672-1401702, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaaatctctgtgttgaggccc	Protospacer
************* ***********.*****

61. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 2050051-2050081, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctatgttgggtccc	Protospacer
*******************.******* ***

62. spacer 4.1|801792|31|NZ_AP019712|CRISPRCasFinder matches to position: 2731016-2731046, mismatch: 2, identity: 0.935

tttcttttcgaaattctctgtgttggggccc	CRISPR spacer
tttcttttcgaaattctctgtattgggggcc	Protospacer
*********************.****** **

63. spacer 7.1|1136815|33|NZ_AP019712|CRISPRCasFinder matches to position: 2075396-2075428, mismatch: 2, identity: 0.939

gacaatgtaagttggggtggggccccaacacag	CRISPR spacer
gacaatgcaagttggggtggggccccaacaaag	Protospacer
*******.********************** **

64. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 248379-248417, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

65. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 248437-248475, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

66. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 248495-248533, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

67. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 1667475-1667513, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgtaaagaaattctacaggcaatgcgagttggg	Protospacer
******** ** ***************************

68. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 1945548-1945586, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

69. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 2283455-2283493, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

70. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 919315-919353, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

71. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 2328478-2328516, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcaaaaagaaattctacaggcaatgcgagttggg	Protospacer
*******.*** ***************************

72. spacer 8.1|1219991|39|NZ_AP019712|PILER-CR matches to position: 2497304-2497342, mismatch: 2, identity: 0.949

gaatttcgaaatgaaattctacaggcaatgcgagttggg	CRISPR spacer
gaatttcgaaaagaaattctacaggcaatgcaagttggg	Protospacer
*********** *******************.*******

73. spacer 8.2|1220067|20|NZ_AP019712|PILER-CR matches to position: 49879-49898, mismatch: 2, identity: 0.9

cttacaataatgtgcaagtt	CRISPR spacer
cttacaataatgtgccggtt	Protospacer
*************** .***

74. spacer 9.1|1443021|32|NZ_AP019712|CRISPRCasFinder matches to position: 812698-812729, mismatch: 2, identity: 0.938

tttcttttcgaaattctctgtgttggggccca	CRISPR spacer
tttcatttcgaaattctctatgttggggccca	Protospacer
**** **************.************

75. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 874274-874298, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

76. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 919318-919342, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

77. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 1136852-1136876, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaatagaaattctacaagcaa	Protospacer
******* *************.***

78. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2432484-2432508, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

79. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2497307-2497331, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

80. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 248390-248414, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

81. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 248448-248472, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

82. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 248506-248530, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

83. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 1356846-1356870, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
ttccgaaaagaaattccacaaacaa	Protospacer
**.*************.********

84. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 1945559-1945583, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

85. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 1956009-1956033, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaggaaattctacagacaa	Protospacer
********.***********.****

86. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2050039-2050063, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctgcgaacaa	Protospacer
*****************.*.*****

87. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2283466-2283490, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

88. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2294214-2294238, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcaaaaagaaattctacagacaa	Protospacer
****.***************.****

89. spacer 10.1|1753252|25|NZ_AP019712|PILER-CR matches to position: 2731004-2731028, mismatch: 2, identity: 0.92

tttcgaaaagaaattctacaaacaa	CRISPR spacer
tttcgaaaagaaattctacaggcaa	Protospacer
********************..***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP019712_2 2.1|702798|26|NZ_AP019712|CRISPRCasFinder 702798-702823 26 MN657034 Psychrobacter sp. strain ANT_P15B plasmid pA15BP4, complete sequence 7362-7387 5 0.808
NZ_AP019712_3 3.1|755496|29|NZ_AP019712|CRISPRCasFinder 755496-755524 29 LC371242 Escherichia phage EcS1 DNA, complete sequence 15447-15475 5 0.828
NZ_AP019712_6 6.1|874635|31|NZ_AP019712|CRISPRCasFinder 874635-874665 31 NC_041878 Pectobacterium phage CBB, complete genome 74842-74872 8 0.742

1. spacer 2.1|702798|26|NZ_AP019712|CRISPRCasFinder matches to MN657034 (Psychrobacter sp. strain ANT_P15B plasmid pA15BP4, complete sequence) position: , mismatch: 5, identity: 0.808

acaaaggaatacagttggatgctaac	CRISPR spacer
gtaaaggaatatggttggatgctaaa	Protospacer
..*********..************ 

2. spacer 3.1|755496|29|NZ_AP019712|CRISPRCasFinder matches to LC371242 (Escherichia phage EcS1 DNA, complete sequence) position: , mismatch: 5, identity: 0.828

gccccaacaaagagaatttcgaaaagaaa	CRISPR spacer
tcgtcaacaaaaagaatttcgtaaagaaa	Protospacer
 * .*******.********* *******

3. spacer 6.1|874635|31|NZ_AP019712|CRISPRCasFinder matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 8, identity: 0.742

aagaaccattacataataaagcataagtgat	CRISPR spacer
aagaaacattacataaaaaagcacgagaaga	Protospacer
***** ********** ******..** .. 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 259231 : 306573 41 Lactococcus_phage(22.22%) transposase,holin NA
DBSCAN-SWA_2 396906 : 408232 12 Lactococcus_phage(25.0%) transposase NA
DBSCAN-SWA_3 733846 : 741656 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_4 753626 : 767791 13 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_5 800413 : 808066 6 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 853722 : 873289 26 Staphylococcus_phage(78.95%) coat,integrase,terminase attL 851936:851954|attR 874356:874374
DBSCAN-SWA_7 1035100 : 1043573 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_8 1303645 : 1320584 29 Staphylococcus_phage(59.09%) capsid,portal,integrase,terminase attL 1297368:1297385|attR 1322562:1322579
DBSCAN-SWA_9 1605076 : 1613388 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_10 1682812 : 1691855 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_11 1815323 : 1876374 58 Staphylococcus_phage(83.33%) transposase,tRNA,protease NA
DBSCAN-SWA_12 1956662 : 2056266 119 Staphylococcus_phage(87.8%) transposase,holin,integrase,tRNA,portal,capsid,tail,head,protease,terminase attL 2021401:2021418|attR 2046127:2046144
Click the colored protein region to show detailed information
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_AP019712.1|WP_000681966.1|1994791_1994968_-|hypothetical-protein 1994791_1994968_- 58 aa aa NA NA NA 1956662-2056266 yes
NZ_AP019712.1|WP_000990056.1|1995209_1995308_-|hypothetical-protein 1995209_1995308_- 32 aa aa NA NA NA 1956662-2056266 yes