CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046392	Acinetobacter indicus strain WMB-7 chromosome, complete genome	3 crisprs	cas14j,DEDDh,csa3,cas3,WYL,c2c9_V-U4,DinG,PD-DExK	2	23	16	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046392_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046392_1

1372393-1375182

Orphan

I-F:NA

Consensus_repeat	Method
GTTTACTGCCATGTAGGCAGCTTAGAAAA	PILER-CR
GTTTACTGCCATGTAGGCAGCTTAGAAA	CRISPRCasFinder
GTTNACTGCCATNTAGGCAGCTTAGAAA	CRT
GTTTACTGCCATGTAGGCAGCTTAGAAA	PILER-CR

46 spacers

The CRISPR arrays of NZ_CP046392_1

>merge|NZ_CP046392|1|1372393-1375182|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTACTGCCATGTAGGCAGCTTAGAAAAGACTCGGCTTTCTAAGAAAAAATTTGACACTGTTTACTGCCATGTAGGCAGCTTAGAAAATTTGTTCTTCAGCTTGAATTAATTGATAGTGGTTTACTGCCATGTAGGCAGCTTAGAAAACTACTTTATTTAGAGCTAATAAAAAGGTTTTGTTTACTGCCATGTAGGCAGCTTAGAAAATATCGTGACTGGATCCTTGATGAAAATGATAGTTTACTGCCATGTAGGCAGCTTAGAAAAGGTACACCACCTGCACCTGAAAACACTGGCAGTTTACTGCCATGTAGGCAGCTTAGAAACTTGTCACAATTAGTATTCAGGGTCTACATAAGTTTACTGCCATGTAGGCAGCTTAGAAAACATCAAAATCAGTCTGCTTGCATTCGTATTTGTTTACTGCCATGTAGGCAGCTTAGAAAATTGGTATTGAAACACTTGGGGAAGGCTTTATGTTTACTGCCATGTAGGCAGCTTAGAAAATTGAAATATTAACTCCTCTCAATATACTTGTGTTTACTGCCATGTAGGCAGCTTAGAAATTTAATTTTGTAATCAGTACTTTTTTTACCGAGTTTACTGCCATGTAGGCAGCTTAGAAAATTAGAAGACGTGGACTCTCTCAGCAGTAGTCGTTTACTGCCATGTAGGCAGCTTAGAAATGTAGAAGATAAATATCATGTTGTTGTATATCGTTTACTGCCATGTAGGCAGCTTAGAAAGTTTTGCTTCATGCAGCCCGAAAAGCGCGGAAGTTTACTGCCATGTAGGCAGCTTAGAAAACTGTAGGCAATGGTTTGTTGCTACATCCACGGTTTACTGCCATGTAGGCAGCTTAGAAACAGAGAAATACAATTCTGGTCATGCTTTCTGGTGTTTACTGCCATGTAGGCAGCTTAGAAAAACTTGAGCGCATGGCAAGAATCGAAAAATATGTTTACTGCCATGTAGGCAGCTTAGAAATGACATATACTGTCCACCCTGAGCCATTATTGGTTTACTGCCATGTAGGCAGCTTAGAAATTTATCTTTGTATTCGTCCAACTTATCTAAAAGTTTACTGCCATGTAGGCAGCTTAGAAAGATGATTAAAGACTTGACCACTCACGGACACAGTTTACTGCCATGTAGGCAGCTTAGAAATTTATGCTCAACGTTTGGCGCTCGATTCCCACGTTTACTGCCATGTAGGCAGCTTAGAAATTTATGCTCAACGTTTGGCGCTCGATTCCCACGTTTACTGCCATGTAGGCAGCTTAGAAATGTGATACAGCTAATCCCCCTAAACCTAATGCGTTTACTGCCATGTAGGCAGCTTAGAAAAACCAGCACTGCAACAACAGTTGCCAAGATTCGTTTACTGCCATGTAGGCAGCTTAGAAATTCATATTGAATCAAAAAATAATGTAATTCCGGTTTACTGCCATGTAGGCAGCTTAGAAATGCTTTAAGTGCGTTTAACTTTTCACAAGCCAGTTTACTGCCATGTAGGCAGCTTAGAAAATTAAGCATCCATGGAAGTTTTCGAGACAGTTGTTTACTGCCATGTAGGCAGCTTAGAAAATCATCTAGGCGCGTGTCATCAGTGTTTAAAAGTTTACTGCCATGTAGGCAGCTTAGAAAACTTACGCATTTCCTAATACCTTATACAAATTGTTCACTGCCATATAGGCAGCTTAGAAACAGCTGCTGAACTTCAACCGCAGTAAATTCCGGTTCACTGCCATATAGGCAGCTTAGAAATGTACCTGCATAGTCTTTACCGATACCCACACGTTCACTGCCATATAGGCAGCTTAGAAAAGAGGAAATTATTGATTTTCTCGATCAGCAGAGTTCACTGCCATATAGGCAGCTTAGAAAGCGAAGGCTGGCACGGACTATGAGGCCGCAAAGTTCACTGCCATATAGGCAGCTTAGAAATGTTTGATGAATATTACTCATGCCCTGCGCCTGTTCACTGCCATATAGGCAGCTTAGAAATTAAACCATTGCGCATTTGCCGGCGTGGTACCGTTCACTGCCATATAGGCAGCTTAGAAAATTCTGGAATTTAATTCTGCGCACTTGATATAGTTCACTGCCATATAGGCAGCTTAGAAAGATACAAAAAAGAAAAGCGTCAGATAATGCAAGTTCACTGCCATATAGGCAGCTTAGAAAAGTGAGTAATAAGTTCCTGCCTCAATGCATCAGTTCACTGCCATATAGGCAGCTTAGAAAAAAGTACATCACCGAGACTACAAAAGGCCGAAGTTCACTGCCATATAGGCAGCTTAGAAAATCTTTGAATTTCGCACCGCGCAGCAATCTGAGTTCACTGCCATATAGGCAGCTTAGAAAGCAGAATTTAGCGGGGTTTTTCTTGCGTAAAAGTTCACTGCCATATAGGCAGCTTAGAAAAGAATTATTTTTTCACCACATTCGCTATTTCGGTTCACTGCCATATAGGCAGCTTAGAAAAAAAATATCACAACAAGATTGTAGACGTTGGCGTTCACTGCCATATAGGCAGCTTAGAAAAGCTTGAGCATTAGAAATAACTTTTTGGGCAAGTTCACTGCCATATAGGCAGCTTAGAAAAATTGAAGCATCTGAAAAGTGGCGCATGTATATGTTCACTGCCATGTAGGCAGCTTAGAAAATCCAAGTTCTTGAAAAACAGTCAGATCAGCTGTTTACTGCCATGTAGGCAGCTTAGAAAAACTCAGAAAGACCACTATTAGTATTGCCAACGTTTACTGCCATGTAGGCAGCTTAGAAA

>NZ_CP046392|1|1|1372393-1372541|PILER-CR
GTTTACTGCCATGTAGGCAGCTTAGAAAA	GACTCGGCTTTCTAAGAAAAAATTTGACACT
GTTTACTGCCATGTAGGCAGCTTAGAAAA	TTTGTTCTTCAGCTTGAATTAATTGATAGTG
GTTTACTGCCATGTAGGCAGCTTAGAAAACTACTTTATTTAGAGCTAATAAAAAGGTTTTGTTTACTGCCATGTAGGCAGCTTAGAAAATATCGTGACTGGATCCTTGATGAAAATGATAGTTTACTGCCATGTAGGCAGCTTAGAAA	AGGTACACCACCTGCACCTGAAAACACTGGCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	CTTGTCACAATTAGTATTCAGGGTCTACATAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACATCAAAATCAGTCTGCTTGCATTCGTATTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGGTATTGAAACACTTGGGGAAGGCTTTAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGAAATATTAACTCCTCTCAATATACTTGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTAATTTTGTAATCAGTACTTTTTTTACCGA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAGAAGACGTGGACTCTCTCAGCAGTAGTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTAGAAGATAAATATCATGTTGTTGTATATC
GTTTACTGCCATGTAGGCAGCTTAGAAA	GTTTTGCTTCATGCAGCCCGAAAAGCGCGGAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTGTAGGCAATGGTTTGTTGCTACATCCACG
GTTTACTGCCATGTAGGCAGCTTAGAAA	CAGAGAAATACAATTCTGGTCATGCTTTCTGGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTTGAGCGCATGGCAAGAATCGAAAAATAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGACATATACTGTCCACCCTGAGCCATTATTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATCTTTGTATTCGTCCAACTTATCTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	GATGATTAAAGACTTGACCACTCACGGACACA
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTGATACAGCTAATCCCCCTAAACCTAATGC
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACCAGCACTGCAACAACAGTTGCCAAGATTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTCATATTGAATCAAAAAATAATGTAATTCCG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGCTTTAAGTGCGTTTAACTTTTCACAAGCCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAAGCATCCATGGAAGTTTTCGAGACAGTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATCATCTAGGCGCGTGTCATCAGTGTTTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTTACGCATTTCCTAATACCTTATACAAATT
GTTCACTGCCATATAGGCAGCTTAGAAA	CAGCTGCTGAACTTCAACCGCAGTAAATTCCG
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTACCTGCATAGTCTTTACCGATACCCACAC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAGGAAATTATTGATTTTCTCGATCAGCAGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCGAAGGCTGGCACGGACTATGAGGCCGCAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTTTGATGAATATTACTCATGCCCTGCGCCT
GTTCACTGCCATATAGGCAGCTTAGAAA	TTAAACCATTGCGCATTTGCCGGCGTGGTACC
GTTCACTGCCATATAGGCAGCTTAGAAA	ATTCTGGAATTTAATTCTGCGCACTTGATATA
GTTCACTGCCATATAGGCAGCTTAGAAA	GATACAAAAAAGAAAAGCGTCAGATAATGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGTGAGTAATAAGTTCCTGCCTCAATGCATCA
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAGTACATCACCGAGACTACAAAAGGCCGAA
GTTCACTGCCATATAGGCAGCTTAGAAA	ATCTTTGAATTTCGCACCGCGCAGCAATCTGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCAGAATTTAGCGGGGTTTTTCTTGCGTAAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAATTATTTTTTCACCACATTCGCTATTTCG
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAAATATCACAACAAGATTGTAGACGTTGGC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGCTTGAGCATTAGAAATAACTTTTTGGGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AATTGAAGCATCTGAAAAGTGGCGCATGTATAT
GTTCACTGCCATGTAGGCAGCTTAGAAA	ATCCAAGTTCTTGAAAAACAGTCAGATCAGCT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTCAGAAAGACCACTATTAGTATTGCCAAC


>NZ_CP046392|1|1|1372393-1375182|CRISPRCasFinder
GTTTACTGCCATGTAGGCAGCTTAGAAA	AGACTCGGCTTTCTAAGAAAAAATTTGACACT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTTGTTCTTCAGCTTGAATTAATTGATAGTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTACTTTATTTAGAGCTAATAAAAAGGTTTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATATCGTGACTGGATCCTTGATGAAAATGATA
GTTTACTGCCATGTAGGCAGCTTAGAAA	AGGTACACCACCTGCACCTGAAAACACTGGCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	CTTGTCACAATTAGTATTCAGGGTCTACATAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACATCAAAATCAGTCTGCTTGCATTCGTATTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGGTATTGAAACACTTGGGGAAGGCTTTAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGAAATATTAACTCCTCTCAATATACTTGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTAATTTTGTAATCAGTACTTTTTTTACCGA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAGAAGACGTGGACTCTCTCAGCAGTAGTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTAGAAGATAAATATCATGTTGTTGTATATC
GTTTACTGCCATGTAGGCAGCTTAGAAA	GTTTTGCTTCATGCAGCCCGAAAAGCGCGGAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTGTAGGCAATGGTTTGTTGCTACATCCACG
GTTTACTGCCATGTAGGCAGCTTAGAAA	CAGAGAAATACAATTCTGGTCATGCTTTCTGGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTTGAGCGCATGGCAAGAATCGAAAAATAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGACATATACTGTCCACCCTGAGCCATTATTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATCTTTGTATTCGTCCAACTTATCTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	GATGATTAAAGACTTGACCACTCACGGACACA
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTGATACAGCTAATCCCCCTAAACCTAATGC
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACCAGCACTGCAACAACAGTTGCCAAGATTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTCATATTGAATCAAAAAATAATGTAATTCCG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGCTTTAAGTGCGTTTAACTTTTCACAAGCCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAAGCATCCATGGAAGTTTTCGAGACAGTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATCATCTAGGCGCGTGTCATCAGTGTTTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTTACGCATTTCCTAATACCTTATACAAATT
GTTCACTGCCATATAGGCAGCTTAGAAA	CAGCTGCTGAACTTCAACCGCAGTAAATTCCG
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTACCTGCATAGTCTTTACCGATACCCACAC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAGGAAATTATTGATTTTCTCGATCAGCAGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCGAAGGCTGGCACGGACTATGAGGCCGCAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTTTGATGAATATTACTCATGCCCTGCGCCT
GTTCACTGCCATATAGGCAGCTTAGAAA	TTAAACCATTGCGCATTTGCCGGCGTGGTACC
GTTCACTGCCATATAGGCAGCTTAGAAA	ATTCTGGAATTTAATTCTGCGCACTTGATATA
GTTCACTGCCATATAGGCAGCTTAGAAA	GATACAAAAAAGAAAAGCGTCAGATAATGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGTGAGTAATAAGTTCCTGCCTCAATGCATCA
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAGTACATCACCGAGACTACAAAAGGCCGAA
GTTCACTGCCATATAGGCAGCTTAGAAA	ATCTTTGAATTTCGCACCGCGCAGCAATCTGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCAGAATTTAGCGGGGTTTTTCTTGCGTAAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAATTATTTTTTCACCACATTCGCTATTTCG
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAAATATCACAACAAGATTGTAGACGTTGGC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGCTTGAGCATTAGAAATAACTTTTTGGGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AATTGAAGCATCTGAAAAGTGGCGCATGTATAT
GTTCACTGCCATGTAGGCAGCTTAGAAA	ATCCAAGTTCTTGAAAAACAGTCAGATCAGCT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTCAGAAAGACCACTATTAGTATTGCCAAC
GTTTACTGCCATGTAGGCAGCTTAGAAA

>NZ_CP046392|1|1|1372393-1375182|CRT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AGACTCGGCTTTCTAAGAAAAAATTTGACACT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTTGTTCTTCAGCTTGAATTAATTGATAGTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTACTTTATTTAGAGCTAATAAAAAGGTTTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATATCGTGACTGGATCCTTGATGAAAATGATA
GTTTACTGCCATGTAGGCAGCTTAGAAA	AGGTACACCACCTGCACCTGAAAACACTGGCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	CTTGTCACAATTAGTATTCAGGGTCTACATAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACATCAAAATCAGTCTGCTTGCATTCGTATTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGGTATTGAAACACTTGGGGAAGGCTTTAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGAAATATTAACTCCTCTCAATATACTTGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTAATTTTGTAATCAGTACTTTTTTTACCGA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAGAAGACGTGGACTCTCTCAGCAGTAGTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTAGAAGATAAATATCATGTTGTTGTATATC
GTTTACTGCCATGTAGGCAGCTTAGAAA	GTTTTGCTTCATGCAGCCCGAAAAGCGCGGAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTGTAGGCAATGGTTTGTTGCTACATCCACG
GTTTACTGCCATGTAGGCAGCTTAGAAA	CAGAGAAATACAATTCTGGTCATGCTTTCTGGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTTGAGCGCATGGCAAGAATCGAAAAATAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGACATATACTGTCCACCCTGAGCCATTATTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATCTTTGTATTCGTCCAACTTATCTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	GATGATTAAAGACTTGACCACTCACGGACACA
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTGATACAGCTAATCCCCCTAAACCTAATGC
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACCAGCACTGCAACAACAGTTGCCAAGATTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTCATATTGAATCAAAAAATAATGTAATTCCG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGCTTTAAGTGCGTTTAACTTTTCACAAGCCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAAGCATCCATGGAAGTTTTCGAGACAGTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATCATCTAGGCGCGTGTCATCAGTGTTTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTTACGCATTTCCTAATACCTTATACAAATT
GTTCACTGCCATATAGGCAGCTTAGAAA	CAGCTGCTGAACTTCAACCGCAGTAAATTCCG
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTACCTGCATAGTCTTTACCGATACCCACAC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAGGAAATTATTGATTTTCTCGATCAGCAGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCGAAGGCTGGCACGGACTATGAGGCCGCAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTTTGATGAATATTACTCATGCCCTGCGCCT
GTTCACTGCCATATAGGCAGCTTAGAAA	TTAAACCATTGCGCATTTGCCGGCGTGGTACC
GTTCACTGCCATATAGGCAGCTTAGAAA	ATTCTGGAATTTAATTCTGCGCACTTGATATA
GTTCACTGCCATATAGGCAGCTTAGAAA	GATACAAAAAAGAAAAGCGTCAGATAATGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGTGAGTAATAAGTTCCTGCCTCAATGCATCA
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAGTACATCACCGAGACTACAAAAGGCCGAA
GTTCACTGCCATATAGGCAGCTTAGAAA	ATCTTTGAATTTCGCACCGCGCAGCAATCTGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCAGAATTTAGCGGGGTTTTTCTTGCGTAAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAATTATTTTTTCACCACATTCGCTATTTCG
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAAATATCACAACAAGATTGTAGACGTTGGC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGCTTGAGCATTAGAAATAACTTTTTGGGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AATTGAAGCATCTGAAAAGTGGCGCATGTATAT
GTTCACTGCCATGTAGGCAGCTTAGAAA	ATCCAAGTTCTTGAAAAACAGTCAGATCAGCT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTCAGAAAGACCACTATTAGTATTGCCAAC
GTTTACTGCCATGTAGGCAGCTTAGAAA

>NZ_CP046392|1|2|1372633-1375182|PILER-CR
	GACTCGGCTTTCTAAGAAAAAATTTGACACT
GTTTACTGCCATGTAGGCAGCTTAGAAAA	TTTGTTCTTCAGCTTGAATTAATTGATAGTG
GTTTACTGCCATGTAGGCAGCTTAGAAAACTACTTTATTTAGAGCTAATAAAAAGGTTTTGTTTACTGCCATGTAGGCAGCTTAGAAAATATCGTGACTGGATCCTTGATGAAAATGATAGTTTACTGCCATGTAGGCAGCTTAGAAA	AGGTACACCACCTGCACCTGAAAACACTGGCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	CTTGTCACAATTAGTATTCAGGGTCTACATAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACATCAAAATCAGTCTGCTTGCATTCGTATTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGGTATTGAAACACTTGGGGAAGGCTTTAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTGAAATATTAACTCCTCTCAATATACTTGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTAATTTTGTAATCAGTACTTTTTTTACCGA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAGAAGACGTGGACTCTCTCAGCAGTAGTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTAGAAGATAAATATCATGTTGTTGTATATC
GTTTACTGCCATGTAGGCAGCTTAGAAA	GTTTTGCTTCATGCAGCCCGAAAAGCGCGGAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTGTAGGCAATGGTTTGTTGCTACATCCACG
GTTTACTGCCATGTAGGCAGCTTAGAAA	CAGAGAAATACAATTCTGGTCATGCTTTCTGGT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTTGAGCGCATGGCAAGAATCGAAAAATAT
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGACATATACTGTCCACCCTGAGCCATTATTG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATCTTTGTATTCGTCCAACTTATCTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	GATGATTAAAGACTTGACCACTCACGGACACA
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTTATGCTCAACGTTTGGCGCTCGATTCCCAC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGTGATACAGCTAATCCCCCTAAACCTAATGC
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACCAGCACTGCAACAACAGTTGCCAAGATTC
GTTTACTGCCATGTAGGCAGCTTAGAAA	TTCATATTGAATCAAAAAATAATGTAATTCCG
GTTTACTGCCATGTAGGCAGCTTAGAAA	TGCTTTAAGTGCGTTTAACTTTTCACAAGCCA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATTAAGCATCCATGGAAGTTTTCGAGACAGTT
GTTTACTGCCATGTAGGCAGCTTAGAAA	ATCATCTAGGCGCGTGTCATCAGTGTTTAAAA
GTTTACTGCCATGTAGGCAGCTTAGAAA	ACTTACGCATTTCCTAATACCTTATACAAATT
GTTCACTGCCATATAGGCAGCTTAGAAA	CAGCTGCTGAACTTCAACCGCAGTAAATTCCG
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTACCTGCATAGTCTTTACCGATACCCACAC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAGGAAATTATTGATTTTCTCGATCAGCAGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCGAAGGCTGGCACGGACTATGAGGCCGCAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	TGTTTGATGAATATTACTCATGCCCTGCGCCT
GTTCACTGCCATATAGGCAGCTTAGAAA	TTAAACCATTGCGCATTTGCCGGCGTGGTACC
GTTCACTGCCATATAGGCAGCTTAGAAA	ATTCTGGAATTTAATTCTGCGCACTTGATATA
GTTCACTGCCATATAGGCAGCTTAGAAA	GATACAAAAAAGAAAAGCGTCAGATAATGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGTGAGTAATAAGTTCCTGCCTCAATGCATCA
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAGTACATCACCGAGACTACAAAAGGCCGAA
GTTCACTGCCATATAGGCAGCTTAGAAA	ATCTTTGAATTTCGCACCGCGCAGCAATCTGA
GTTCACTGCCATATAGGCAGCTTAGAAA	GCAGAATTTAGCGGGGTTTTTCTTGCGTAAAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AGAATTATTTTTTCACCACATTCGCTATTTCG
GTTCACTGCCATATAGGCAGCTTAGAAA	AAAAATATCACAACAAGATTGTAGACGTTGGC
GTTCACTGCCATATAGGCAGCTTAGAAA	AGCTTGAGCATTAGAAATAACTTTTTGGGCAA
GTTCACTGCCATATAGGCAGCTTAGAAA	AATTGAAGCATCTGAAAAGTGGCGCATGTATAT
GTTCACTGCCATGTAGGCAGCTTAGAAA	ATCCAAGTTCTTGAAAAACAGTCAGATCAGCT
GTTTACTGCCATGTAGGCAGCTTAGAAA	AACTCAGAAAGACCACTATTAGTATTGCCAAC
GTTTACTGCCATGTAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046392.1\|WP_156188924.1\|1366562_1367174_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156188921.1\|1365228_1365786_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_005177351.1\|1382930_1383221_+\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	unknown	unknown	gnl\|CDD\|237504
NZ_CP046392.1\|WP_016658268.1\|1384016_1384517_+\|phenylacetate-CoA-oxygenase-subunit-PaaJ	unknown	unknown	gnl\|CDD\|131214
NZ_CP046392.1\|WP_156188925.1\|1367401_1367782_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_104988188.1\|1377166_1378186_+\|IS21-like-element-ISAba8-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP046392.1\|WP_156188926.1\|1379571_1381689_-\|phenylacetic-acid-degradation-bifunctional-protein-PaaZ	unknown	unknown	gnl\|CDD\|236931
NZ_CP046392.1\|WP_104988713.1\|1386409_1387201_+\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	unknown	unknown	gnl\|CDD\|236163
NZ_CP046392.1\|WP_156188923.1\|1366168_1366447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_104988715.1\|1383232_1383988_+\|phenylacetate-CoA-oxygenase-subunit-PaaC	unknown	unknown	gnl\|CDD\|368300
NZ_CP046392.1\|WP_104988717.1\|1375230_1375725_-\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP046392.1\|WP_171431988.1\|1364991_1365150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_004811110.1\|1367901_1368834_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP046392.1\|WP_051061469.1\|1371380_1372313_+\|IS5-like-element-ISAba12-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP046392.1\|WP_156189675.1\|1371199_1371373_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP046392.1\|WP_104490639.1\|1381949_1382894_+\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	unknown	unknown	gnl\|CDD\|184320
NZ_CP046392.1\|WP_001053379.1\|1378185_1378959_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
NZ_CP046392.1\|WP_104988714.1\|1384556_1385615_+\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	unknown	unknown	gnl\|CDD\|131215
NZ_CP046392.1\|WP_156188922.1\|1365766_1366108_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_004645384.1\|1369975_1370722_+\|IS5-like-element-ISAba31-family-transposase	unknown	unknown	gnl\|CDD\|379129

Protein	Function_ID	Function_description	E-value
NZ_CP046392.1\|WP_104988714.1\|1384556_1385615_+\|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK	gnl\|CDD\|131215	TIGR02160, 12-phenylacetyl-CoA_epoxidase_subunit_E, phenylacetate-CoA oxygenase/reductase, PaaK subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	6.3902e-134
NZ_CP046392.1\|WP_104490639.1\|1381949_1382894_+\|1,2-phenylacetyl-CoA-epoxidase-subunit-A	gnl\|CDD\|184320	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional.	0
NZ_CP046392.1\|WP_016658268.1\|1384016_1384517_+\|phenylacetate-CoA-oxygenase-subunit-PaaJ	gnl\|CDD\|131214	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit. Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation. Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA. [Energy metabolism, Other].	2.22331e-59
NZ_CP046392.1\|WP_104988713.1\|1386409_1387201_+\|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	5.34508e-160
NZ_CP046392.1\|WP_156188926.1\|1379571_1381689_-\|phenylacetic-acid-degradation-bifunctional-protein-PaaZ	gnl\|CDD\|236931	PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional.	0
NZ_CP046392.1\|WP_104988715.1\|1383232_1383988_+\|phenylacetate-CoA-oxygenase-subunit-PaaC	gnl\|CDD\|368300	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein. This family includes proteins such as PaaA and PaaC that are part of a catabolic pathway of phenylacetic acid. These proteins may form part of a dioxygenase complex.	1.83647e-107
NZ_CP046392.1\|WP_104988717.1\|1375230_1375725_-\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	8.11806e-64
NZ_CP046392.1\|WP_104988188.1\|1377166_1378186_+\|IS21-like-element-ISAba8-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.03149e-56
NZ_CP046392.1\|WP_004811110.1\|1367901_1368834_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.12081e-49
NZ_CP046392.1\|WP_051061469.1\|1371380_1372313_+\|IS5-like-element-ISAba12-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	4.11969e-47
NZ_CP046392.1\|WP_156189675.1\|1371199_1371373_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.766e-06
NZ_CP046392.1\|WP_005177351.1\|1382930_1383221_+\|1,2-phenylacetyl-CoA-epoxidase-subunit-B	gnl\|CDD\|237504	PRK13781, paaB, phenylacetate-CoA oxygenase subunit PaaB; Provisional.	5.76461e-63
NZ_CP046392.1\|WP_001053379.1\|1378185_1378959_+\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	3.89315e-150
NZ_CP046392.1\|WP_004645384.1\|1369975_1370722_+\|IS5-like-element-ISAba31-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	3.12807e-21

>NZ_CP046392.1|WP_051061469.1|1371380_1372313_+|IS5-like-element-ISAba12-family-transposase
MKKPAHKIYRTTNWPAYNRALMSRGNIAIWFDPATQWYAPSKGKQGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWIAPDYTTLCRRQKHIDIVISYQKSSDGLHLLMDSTGMKFLGEGEWKRKKHGPEYRRQWRKLHIGIDAKTLQIRAVQLTTNNVSDSQVLGDLLNQIPQDEQINSVYTDGAYDTKQCRQVIADRQAHAVIPPRKNAKPWKDTKSSSLERNELLRAIKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEIHARVAVLNRFTELGRPLTQVTP
>NZ_CP046392.1|WP_156189675.1|1371199_1371373_+|helix-turn-helix-domain-containing-protein
MLLSTTQAAQIMGLKPQTLRKWAMDGSGPIQPIKIGNRLKWKRLCCTNLSVKGFSAI
>NZ_CP046392.1|WP_004645384.1|1369975_1370722_+|IS5-like-element-ISAba31-family-transposase
MPRTMLTDQHWQKLKVILRNLSIHHNSNLRNFIEAILYRIRTGCPWRDIPCCFGHSNSIFKRFNRWSSSGKLLRLFKLLASCPDMEWIFIDGSHVRAHQHSAGIANQSISKSVGGNSSKIHLIVDAHGNPIDFMITDGTTHDVKVAPDLISTLDLKETKVVCADKGYDSEPLREQIRKTGTKANIPKKTNSQSNNDHMDWYLYKIRHLVENMFCRLKQFRGIATRYDKLKRNYQSSVALACIFLWLPL
>NZ_CP046392.1|WP_004811110.1|1367901_1368834_+|IS5-family-transposase
MKKPTHKIYRTTNWPAYNRALINRGNIAIWFDPKTQWYAEPQGKQGRSQTYSDIAIQCCLMIKSLFRLTLRMVTGFVQSLIKLCGLDWTAPDFTTLCRRQKYIDIQINYQKSRDGLHLLVDSTGLKFLGEGEWKRKKHQPEYRRQWRKLHIGIDAETLQIRAVQLTTNNVSDSQVLGDLLDQIPQDEHIDSVYTDGAYDTKRCRQLITDRNAHAIIPPRKNAKPWKDTKVHSLERNELLRTVKRLGRTLWKKWSGYHQRSLVETKMHCIKLLGDKLSARNFDSQVNEIHARVAILNKFTELGRPHTQVVT
>NZ_CP046392.1|WP_156188925.1|1367401_1367782_+|hypothetical-protein
MSLNVKTRVGNFTGRIFLTNSQSVTVVVPVTHIFDHLDQLPLGKPIPVKNARALFNSMSTQIVLDRQMYELLIVFLKGLYAIRHKRSDKTIEKLPSSATLPSYLHSVPGHYPSIHFAWNTIPPGMI
>NZ_CP046392.1|WP_156188924.1|1366562_1367174_-|hypothetical-protein
MYKNKIKCIQYQLRANSDLFFYLFLSGNNGLKLKVAAQRKKIKKEFLKQISSTCNCHPSLVYKVLRNEVEAKDSLYFVANKQAKFDKHDVHENLLYKDKFIPRENSYKSNRTISHSDFKLFMERRLTTTGFKNSSELYELFIQEAEINPPLCRKTFYRYFKDFLNDVGSIPQYGKFRIIKSKHRKRGYYTAYKEKKNINAPKD
>NZ_CP046392.1|WP_156188923.1|1366168_1366447_+|hypothetical-protein
MTKRNLFALGQVMSTPNALRFAEAENIDLLALLARHHQGDWGDVCEEDRESNEEALLMQLRILSSYNFSKDKIWIITEADRSVTTILLPSDY
>NZ_CP046392.1|WP_156188922.1|1365766_1366108_+|hypothetical-protein
MKLIKSKADIQKVHEQPIAHAILETMHILEHQYEEPYQATLHGWFVVCEDEQDLIQPFENLSFSLSEKLNMGEIEFVEKKKDWFEICILLNDNEGILIYVPKAIFEQHQLQVM
>NZ_CP046392.1|WP_156188921.1|1365228_1365786_+|hypothetical-protein
MQPRIHDKIGYNLIHTFTCNKLSDRAEGQLHYQLWQHSEDQSFGIAISKNESTGGFSAELIKVDDIIQLLGKLYQEGKPFHATVLKSLFIGKSVNNSSFLGAVLVDQNVIHTHPQTARLLEVNEDYELWSIGLESHLKAGQEDIDSSHADKTTGLKSTKKRQHKTAEKVESTSMDEGSEDEIDQE
>NZ_CP046392.1|WP_171431988.1|1364991_1365150_+|hypothetical-protein
MKKYYPELESVSDVLECIPHHQTQSIANAIRVCNDMDSDNVAKVCAVLKVIL
>NZ_CP046392.1|WP_104988717.1|1375230_1375725_-|DNA-starvation/stationary-phase-protection-protein
MTKMKKASMHIDIGISEDNRAKIVEGLSRLLADSYTLYLMTHNFHWNVTGPQFNSLHTMFMTQYTEQWNALDVIAERIRALGFPAPGTYKEFVKLASIEEVEGVPKANEMVELLVRAHESVARTARSIFDVVEEANDQPTADVLTQRLEVHEKTAWMLRSLLEE
>NZ_CP046392.1|WP_104988188.1|1377166_1378186_+|IS21-like-element-ISAba8-family-transposase
MLTLEQAVTIQILHQQGKSIKAITRELGVSRNTVRKYLRQNTTPQYQRIQPRISILDPYKPYLLQRVNAAHPEWIPAVVLYQEILGLGYPGKIRILREYLATLKPVAQPEPIIRFETQPGQQMQVDFTTIRRNNTTLKAFVATLGYSRATFVKFYDHERTDAWIDGLENAFQFFAGVPQEILFDNAKTIMIERDAYQEGQHKWNPKLLDCAKKYSFRPRVCKPYRAQTKGKVERFNGYLKSSFIVPLKASLKTSGLLLDVDVANAHIGRWLHETANQRIHATTQEKPAVRLQQEQQKFTPLPQSDTGSSTVPVAVAQHVMPYESLQHPLSVYDQLLGVS
>NZ_CP046392.1|WP_001053379.1|1378185_1378959_+|AAA-family-ATPase
MNLQYDRIEQLCQKLNLPAIASQWSHHAQQTLGQDGSYADFVEAILTHEYAARQQRSQQVLMKLSGLPQVKTLEDYDFNYALGAPKSQVIELFNLSFIARAENVVFLGASGVGKTHLSMALGYKAIMNNIKIKFITAADLMLQLSTAYQQGKLKTYMQRAVLGPKLLIIDEIGYLPFGREEANLFFNVIAKRYEKGSTILTSNLPFSQWSKSFADDVTLTAAMLDRLLHHCHVVQISGESYRLKDKKRIGIQPQVET
>NZ_CP046392.1|WP_156188926.1|1379571_1381689_-|phenylacetic-acid-degradation-bifunctional-protein-PaaZ
MLELDTQTAQTESQATDYSSVRPALKTLSSLVCGQEFVASQDFRPVQHAITGETIYQVSSFGLDTRAVVDYAKQHGAAIASWTFHQRANALKQVAQYLLERKEDFYELAKATGCTRKDAWIDVEGGIGTLFAYSSLVRRELSDETAWVEDSWIPLSKHGSFGAKHVLSPKAGVAVHINAFNFPIWGMLEKIAPTLLAGVPCIVKPATEGAELTHAVVKAIHASGYLPEGALQLICGQTYDLFEQLTPQDTVTFTGSAATGQKLRAHPHLNQHSIPFSMEADSVNSAILTEQASDTAIDLFVREVFREMTSKAGQKCTAIRRAFVPRELLATVQERLIAKLQKVMVGNPELDQVTMGALASLKQKQDVAAKVEQLSQEAQIVFGSHLPQDFIIQADQPELGAFYPPTVLVCEQPEQASSLHQIEAFGPVVTLMAYDNLAQLAGLVARGEGSLVASVVRDCEQNIEQLIAKIAPWHGRVHVLDEESAKESTGHGSPLPHLVHGGPGRAGGGEELGGLRAVKHYMQRTAIQGSPNAMTQIGHSWTAGAQVFEDRVHPFKKSFDELRVGERLLTARRTVTEADLVNFACLSGDYFYAHMDKIAAAESLFEERVAHGYFVVSAAAGLFVDAAPGPVIANYGMDNLRFVEPVKIGDTIQVELTCKQKTPKQQRDPSQKPHGVVVWDIKVKNQRNELVATYDILTLVERGEV
>NZ_CP046392.1|WP_104490639.1|1381949_1382894_+|1,2-phenylacetyl-CoA-epoxidase-subunit-A
MTNQLHSFEQAIEKDISIEPKNWMPEAYRKTLIRQIGQHAHSEVVGMLPEGNWITRAPSLKRKAVLLAKVQDEAGHALYLYSAAETLGADRDDMMDKLIAGRMKYSSIFNYPTLSWADVAAIGWLVDGAAIVNQVALCRTSYGPYARAMVRICKEESFHQRQGFEAMMQLANGTPEQKQMAQDAVNRFWWPALMMFGPSDDNSPNSAQSMAWKIKRFSNDELRQKFVDNTVPQVLQLGLSVPDPDLRFNQDTGHYEFGEINWTEFFDVIAGKGPCNHERIEARRKAWEGGKWVRDTAAVYAQKQQTQQQQQKVA
>NZ_CP046392.1|WP_005177351.1|1382930_1383221_+|1,2-phenylacetyl-CoA-epoxidase-subunit-B
MDNKNHWSLYEVFVRSKQGLSHRHVGSLRASDDEVALQNARDVYTRRNEGVSIWVVKSELITSSQPDEKPEFFDPSLDKVYRHPTFYNIPDGIEHM
>NZ_CP046392.1|WP_104988715.1|1383232_1383988_+|phenylacetate-CoA-oxygenase-subunit-PaaC
MNQTVLAQFLLHVGDSQLILSHRLAEWCGHAPELELDIALANIGLDLLGQARTALSLAGEIEGLGRDEDKLAYFRTEREYRNLLLCEQPNGDFAQTMVRQWLMDLYHLELFTALSQSQQADIAAFAVKSLKEVKYHLRFSTTWMERLSLGTAEAHEKTQQGLNQLWRFSAELFEQTADEQQLVAQVILPDFAPLKAAWTTQVQTELQRFGLSLPDTGAYRSGAKQGLHTEYLGFILAELQYMQRSYPNMAW
>NZ_CP046392.1|WP_016658268.1|1384016_1384517_+|phenylacetate-CoA-oxygenase-subunit-PaaJ
MNLIRHCLDECWDALAQVSDPEIPVLSVLDLGMIRGVELNAQDEIVVRLTPTYSGCPATDLLKDEITAAFQSKGLTPVQVVVDLSEAWTTDWMSESGKQKLQQYGIAPPQGQSHQCGTHVALSDGIRCPHCHSQQTKLLSEFSSTACKALYKCQDCLEPFDYFKCI
>NZ_CP046392.1|WP_104988714.1|1384556_1385615_+|phenylacetate-CoA-oxygenase/reductase-subunit-PaaK
MSQFIPLTIKSIQPQTEQAICIAFDLAPEQADLFQYQPGQHLTIRHLTEQGEIRRCYSICSDRAEDMSIAIKKIDQGQFSTWANEHLKAGDVLEVMPPQGVFFQKAAKTGGQNYLGFAVGSGITPILSIVKSVLNHQPDAHFTLVYGNRSWKQTMFSEQIMDLKDRYKERLQLVNVFSRELNDSQLLNGRIDAEKLQQLFQAGLIHSQFDHCFACGPEEMMNAVETVLPELGIERSKIHTERFNTGTAAKASAAQIESRSEEKVNIILDGRELIVDVSKQDDSILDAALRAGADLPYACKGGVCATCKCKVLEGEVEMVINYSLEEDEVAKGYVLSCQARPTSANVRLSFDE
>NZ_CP046392.1|WP_104988713.1|1386409_1387201_+|2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA-isomerase
MDYQTIIVEEKNAVGYLTFNRPKQLNSFNETMHQEVSKVMKSWAKDSKIRAVVISAEGRGFCAGQDLNDRVVDPNADAPDLGLSIEKYYNPLIKLITDMPKPVLCAVNGVAAGAGANIALACDIVLAAKSASFIQAFCRLGLVPDSGGTWFLPRLVGRAQAMGLAMLGDKVSAEQALQLGMIWQVVEDDQLKAEAEKMAEHLAKQPTYGLSLIKKAIHAAADNNLDEQLILERDLQRLAGRSSDYKEGVQAFMQKRTPQYTGC

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Crispr_ID: NZ_CP046392_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046392_2

1606995-1607080

Orphan

Consensus_repeat	Method
GCATTGCCACTGGCATGGGCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046392_2

>merge|NZ_CP046392|2|1606995-1607080|CRISPRCasFinder
GCATTGCCACTGGCATGGGCTGCGCGGCCGGCTTCACGCGCTTCTTCGGATGTAAATTCATGCGCATTGCCGCTGGCATGGGCTGC

>NZ_CP046392|2|2|1606995-1607080|CRISPRCasFinder
GCATTGCCACTGGCATGGGCTGC	GCGGCCGGCTTCACGCGCTTCTTCGGATGTAAATTCATGC
GCATTGCCGCTGGCATGGGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046392.1\|WP_104988599.1\|1599619_1600720_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP046392.1\|WP_005178046.1\|1604389_1605199_-\|formate/nitrite-transporter-family-protein	unknown	unknown	gnl\|CDD\|376497
NZ_CP046392.1\|WP_045794748.1\|1609852_1610722_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187613
NZ_CP046392.1\|WP_104988600.1\|1598492_1599623_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP046392.1\|WP_156188962.1\|1613967_1614990_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|99812
NZ_CP046392.1\|WP_156188964.1\|1616786_1618169_-\|aromatic-acid/H+-symport-family-MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NZ_CP046392.1\|WP_156188960.1\|1611068_1612472_-\|iron-containing-redox-enzyme-family-protein	unknown	unknown	gnl\|CDD\|379634
NZ_CP046392.1\|WP_155757101.1\|1603040_1604260_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP046392.1\|WP_000644963.1\|1596337_1597015_-\|IS1595-family-transposase	unknown	unknown	gnl\|CDD\|372298
NZ_CP046392.1\|WP_016658124.1\|1610803_1610968_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156188963.1\|1615360_1616680_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369600
NZ_CP046392.1\|WP_156188959.1\|1607610_1608852_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340951
NZ_CP046392.1\|WP_156188961.1\|1612828_1613950_-\|fatty-acid-desaturase	unknown	unknown	gnl\|CDD\|239583
NZ_CP046392.1\|WP_005178075.1\|1618460_1619375_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176136
NZ_CP046392.1\|WP_045796755.1\|1605491_1605941_+\|cyanase	unknown	unknown	gnl\|CDD\|235079
NZ_CP046392.1\|WP_156188957.1\|1601261_1602977_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP046392.1\|WP_104988601.1\|1590106_1592143_+\|choline-transporter	unknown	unknown	gnl\|CDD\|236635
NZ_CP046392.1\|WP_005177920.1\|1597362_1598493_+\|biotin/lipoyl-binding-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP046392.1\|WP_045795652.1\|1592155_1592764_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_CP046392.1\|WP_045794747.1\|1609510_1609750_+\|DUF2171-domain-containing-protein	unknown	unknown	gnl\|CDD\|370756

Protein	Function_ID	Function_description	E-value
NZ_CP046392.1\|WP_104988599.1\|1599619_1600720_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.72307e-29
NZ_CP046392.1\|WP_005178046.1\|1604389_1605199_-\|formate/nitrite-transporter-family-protein	gnl\|CDD\|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	1.81739e-68
NZ_CP046392.1\|WP_045794748.1\|1609852_1610722_+\|SDR-family-oxidoreductase	gnl\|CDD\|187613	cd05355, SDR_c1, classical (c) SDR, subgroup 1. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.93352e-151
NZ_CP046392.1\|WP_104988600.1\|1598492_1599623_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	7.68642e-27
NZ_CP046392.1\|WP_156188962.1\|1613967_1614990_-\|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein	gnl\|CDD\|99812	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain. Ferredoxin-NADP+ (oxido)reductase is an FAD-containing enzyme that catalyzes the reversible electron transfer between NADP(H) and electron carrier proteins such as ferredoxin and flavodoxin. Isoforms of these flavoproteins (i.e. having a non-covalently bound FAD as a prosthetic group) are present in chloroplasts, mitochondria, and bacteria in which they participate in a wide variety of redox metabolic pathways. The C-terminal domain contains most of the NADP(H) binding residues and the N-terminal domain interacts non-covalently with the isoalloxazine rings of the flavin molecule which lies largely in a large gap betweed the two domains. Ferredoxin-NADP+ reductase first accepts one electron from reduced ferredoxin to form a flavin semiquinone intermediate. The enzyme then accepts a second electron to form FADH2 which then transfers two electrons and a proton to NADP+ to form NADPH.	6.02233e-77
NZ_CP046392.1\|WP_156188964.1\|1616786_1618169_-\|aromatic-acid/H+-symport-family-MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.11321e-116
NZ_CP046392.1\|WP_156188960.1\|1611068_1612472_-\|iron-containing-redox-enzyme-family-protein	gnl\|CDD\|379634	pfam14518, Haem_oxygenas_2, Iron-containing redox enzyme. The CADD, Chlamydia protein associating with death domains, crystal structure reveals a dimer of seven-helical bundles. Each bundle contains a di-iron centre adjacent to an internal cavity that forms an active site similar to that of methane mono-oxygenase hydrolase.	1.78086e-16
NZ_CP046392.1\|WP_155757101.1\|1603040_1604260_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.55544e-101
NZ_CP046392.1\|WP_000644963.1\|1596337_1597015_-\|IS1595-family-transposase	gnl\|CDD\|372298	pfam12762, DDE_Tnp_IS1595, ISXO2-like transposase domain. This domain probably functions as an integrase that is found in a wide variety of transposases, including ISXO2.	1.50016e-35
NZ_CP046392.1\|WP_156188963.1\|1615360_1616680_-\|hypothetical-protein	gnl\|CDD\|369600	pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein. The sequences featured in this family are similar to a region of human TPR protein and to yeast myosin-like proteins 1 (MLP1) and 2 (MLP2). These proteins share a number of features; for example, they all have coiled-coil regions and all three are associated with nuclear pores. TPR is thought to be a component of nuclear pore complex- attached intra-nuclear filaments, and is implicated in nuclear protein import. Moreover, its N-terminal region is involved in the activation of oncogenic kinases, possibly by mediating the dimerization of kinase domains or by targeting these kinases to the nuclear pore complex. MLP1 and MLP2 are involved in the process of telomere length regulation, where they are thought to interact with proteins such as Tel1p and modulate their activity.	0.00935261
NZ_CP046392.1\|WP_156188959.1\|1607610_1608852_-\|MFS-transporter	gnl\|CDD\|340951	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters. The gene encoding Sinorhizobium meliloti membrane protein MosC is part of the mos locus, which encodes the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine. MosC belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.69638e-83
NZ_CP046392.1\|WP_156188961.1\|1612828_1613950_-\|fatty-acid-desaturase	gnl\|CDD\|239583	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases are required for the synthesis of highly unsaturated fatty acids (HUFAs), which are mainly esterified into phospholipids and contribute to maintaining membrane fluidity. While HUFAs may be required for cold tolerance in bacteria, plants and fish, the primary role of HUFAs in mammals is cell signaling. These enzymes are described as front-end desaturases because they introduce a double bond between the pre-exiting double bond and the carboxyl (front) end of the fatty acid. Various substrates are involved, with both acyl-coenzyme A (CoA) and acyl-lipid desaturases present in this CD. Acyl-lipid desaturases are localized in the membranes of cyanobacterial thylakoid, plant endoplasmic reticulum (ER), and plastid; and acyl-CoA desaturases are present in ER membrane. ER-bound plant acyl-lipid desaturases and acyl-CoA desaturases require cytochrome b5 as an electron donor. Most of the eukaryotic desaturase domains have an adjacent N-terminal cytochrome b5-like domain. This domain family has extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain the residues: HXXXH, HXX(X)HH, and Q/HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within the homolog, stearoyl CoA desaturase.	3.81522e-50
NZ_CP046392.1\|WP_005178075.1\|1618460_1619375_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176136	cd08445, PBP2_BenM_CatM_CatR, The C-terminal substrate binding domain of LysR-type transcriptional regulators involved in benzoate catabolism; contains the type 2 periplasmic binding fold. This CD includes the C-terminal of LysR-type transcription regulators, BenM, CatM, and CatR, which are involved in the benzoate catabolism. The BenM and CatM are paralogs with overlapping functions. BenM responds synergistically to two effectors, benzoate and cis,cis-muconate, to activate expression of the benABCDE operon which is involved in benzoate catabolism, while CatM responses only to muconate. BenM and CatM share high protein sequence identity and bind to the operator-promoter regions that have similar DNA sequences. In Pseudomonas species, phenolic compounds are converted by different enzymes to central intermediates, such as protocatechuate and catechols. Generally, unsubstituted compounds, such as benzoate, are metabolized by an ortho-cleavage pathway. The catBCA operon encodes three enzymes of the ortho-pathway required for benzoate catabolism: muconate lactonizing enzyme I, muconolactone isomerase, and catechol 1,2-dioxygenase. CatR normally responds to benzoate and cis,cis-muconate, an inducer molecule, to activate transcription of the catBCA operon, whose gene products convert benzoate to catechol. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the substrate-binding domains from ionotropic glutamate receptors, LysR-like transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	5.5517e-93
NZ_CP046392.1\|WP_045796755.1\|1605491_1605941_+\|cyanase	gnl\|CDD\|235079	PRK02866, PRK02866, cyanate hydratase; Validated.	1.46002e-95
NZ_CP046392.1\|WP_156188957.1\|1601261_1602977_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.80331e-55
NZ_CP046392.1\|WP_104988601.1\|1590106_1592143_+\|choline-transporter	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP046392.1\|WP_005177920.1\|1597362_1598493_+\|biotin/lipoyl-binding-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	3.15263e-32
NZ_CP046392.1\|WP_045795652.1\|1592155_1592764_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	1.68689e-13
NZ_CP046392.1\|WP_045794747.1\|1609510_1609750_+\|DUF2171-domain-containing-protein	gnl\|CDD\|370756	pfam09939, DUF2171, Uncharacterized protein conserved in bacteria (DUF2171). This domain, found in various hypothetical prokaryotic proteins, has no known function.	3.8104e-25

>NZ_CP046392.1|WP_045796755.1|1605491_1605941_+|cyanase
MISHRQQVTDMILSAKVLNNIQWSSVAQEIGLSKEWVTAACLGQMALNKEQAEKIGQIFNLSDEAVAWLQIVPYKGSLPTSIPTDPLIYRWYEVVNVYGSTIKELIHEEFGDGIMSAIDFSMDIQRESHENGDRVNVVLSGKFLPYKSY
>NZ_CP046392.1|WP_005178046.1|1604389_1605199_-|formate/nitrite-transporter-family-protein
MAYLAPSEFATKVVDAGESKLHMANRDVLIRATMAGAILALAAVFAVTIAVQTGVPLIGALLFPVGFCMLYLLGYDLLTGVFVLTPLAWLDKRPGVTWARILKNWGVVFVGNFTGALIVAVMMAAVYTYGFSTEPNKVGLAIAHIGEDRTLGYKEYGVAGWITIFIRGMLCNWMVSLGVIGAMMSTTVSGKFIAMWMPIMLFFAMGFEHSVVNMFLFPFAMMMGGDFSVMDYFIWNELPVALGNLVGGLALTGLALYTTHVRTAPKREF
>NZ_CP046392.1|WP_155757101.1|1603040_1604260_+|IS3-family-transposase
MKKPNYTPEIRERAVQLLIESEKDYPSTWAAITAIAPKIGCTPETLRVWYLKHMDQLNPAKVQQISDQEKMKQMEREIKELKRANEILRKAAGFFRPGGARPPTQIMVDFIHNNKELYGVEAICRILPIAPSTYYRTLDLCENPEHRAKRDLHDLHHAEEIKRIWKESSGRYGVRKVWQKLKREGYIIARCTVARLMKKLGIQGVWRGKNKQTTRSRDDQKRADDLVKRNFTADHPDQLWVSDFTYIQTHSGWVYTAFIIDVFSRAIVGWKVSTRMNTDMVLDALEQALHDRGMPKNVIHHSDRGVQYLSIRYTHRLEAANLRASVGTTGDSYDNALAETVNGLYKTEVIEYLKADWQGLADVQLATLNWVDWFNKKRVHSALGYVSPFEFEAMYYDKINPLGQVA
>NZ_CP046392.1|WP_156188957.1|1601261_1602977_-|protein-kinase
MRLGQYSAAGRKESNQDFHGVAVPEGYLAQQKGIACAIADGISSSNVSHIASETAVSSFLADYFSTPDSWSVKTSVDRVIRATNSWLYAQTQQSQGHVDKDRGYVCTFSALVFKHETAHLFHIGDARIYRLREQQLEQLSVDHRVWLSSRESYLSRALGVAQKVEMDYLSLPLAQDDIFLLMTDGVYEYLSDSQIIEALHSPETLDLDQVAEMLVNLADAQGSPDNLTLQIVQVQQLPQQAQSQFQPSCNQLSLAPDLSIGQQFEGYRIQNVLHQNHRSRLYLAWDETRQQQLVIKIPALDLTQDAQALERFLLEEWVAKRIQHPQVLAAYPHQRSKSYYFQTYEYLSGQTLNTWLHQQRQPIALETAIQITEQIIKGLQAFHRLDMLHQDIRPENIMLNAQLELKLIDFGATLVKGISEFQPQHAAALGTLAFMAPEYFCSRPVSTRSDQFSLAVVLYYVLSKQLPYGTELARCQTLKQLKTVRYHSILEYRPDIPVWIDGALHKALALMPNERYEVLSEFLYDLKHPNRYFLKPVQSSLLDKNPVGFWQAVSAMLFLCLLLSLALMFSV
>NZ_CP046392.1|WP_104988599.1|1599619_1600720_+|ABC-transporter-permease
MKSLWFYYLQSFKDIVSHGTIFTTLILSVLFYSFFYPTAYQAQQAEALPIIIVDEEQSSLSTRIIGQVAQSPNVEIQAITGNFAEAKQWMESQKADGILLLPDNLSQSLRHGETGGIGLYLSTANFLVTKQIGLGLATSVEQTLADYTERFGKVSDFSPALSVHQIPLFNPLSGYGSYVFPAVAPLIIHQTILLGLSMLILVYRERKVELNVNALIGMCLAVFTIGCLGCFYLFGFSFWLFDYPRGGNLLGMLLAVAVFIYTIIGMTCLFASFLDLPERAGHVIVFTSIPLFFLSGAAWPHAAMPTWMQVVGEILPSTQIVQMFIQLNQMGVPTELVLPKLLYLGMIGSLCFFLAYRRLISNCGTF
>NZ_CP046392.1|WP_104988600.1|1598492_1599623_+|ABC-transporter-permease
MWTGIWRELRYLLREKWDLCLVTLAPALVIILFSSMFAQGKPDHLPIAIIDQDQSALSQSIYQHVALNHTLKIATVSEQTAEIERLLNQNKIWGYIHIPSGAEQRLVRARDADISIAFNQSYFSIGNTISSAMLVSTLQALAEFGGQQYLGNRLPSLEAPSPHIKISPLYNPQLNYEFYLELYVIPAILHLLLCCCVAFSVGQELKRQTLTSWISNSSIWMALLSKNLVYVAIFSLWTWIWMFWLIEIRGWFVAGSLALILSAQFLLYSAYAFLSSAVVLATKDLSKSFGIIAVYGGSSLSFAGVTLPLNNAPLFTQFWSNIIPFTPYAKLQTEQWVIGSPLHISLQAGLMLLIYALVYALLAYLFLKKIAKGAVQ
>NZ_CP046392.1|WP_005177920.1|1597362_1598493_+|biotin/lipoyl-binding-protein
MNEDQKPNDPVNEAASSSDTEKSPAQQVETKTEIENNATTSTEQQQAPEIAKKKKYLLLALIPVLLAVIAFGLWKSYQPAPLELQGRVEAETVQVATKVPSRIEEIYVEEGQRVKKGDVLVRLNSPEIQAKKQQAAAALQSALALQSTAERGSQEENIASLYANWQSLKAQQNLAKVSYERGANLFKEGVISRQRRDELYAASQSAAQMTEAAYQQYARAKRGSTSQQKSSADAQVDIAQAALDEANALEAETQLVAPVNGTVSKTYGKVSELVATAVPVVSLIEDQMWVSLNIREDQYAPFQKMSSIEGYIPALDKTATFKIKQISAEGEFATIKTTRQTGGYDVRSFKLHLVPTPAIPELKVGMSVLFKLKETR
>NZ_CP046392.1|WP_000644963.1|1596337_1597015_-|IS1595-family-transposase
MKAKNRYYSRSRIAEAKFRQIIRFFAMDFTASDTAKLTNISVRSINTIYIKLRKKIAVQCEEISPFNGIIELDESYFGARRVRGKRGRGASGKTIVFGLLKRDGNVYTEIVPDCSKATLQGIIRGHIELDSVINTDGWRGYDGLVDIGFDKHLRVNHGDNEFACGERHINGIESFWGYAKKRLSKFNGIDKKMFYLHLKETEYRFNHRHGNLYLDLLKILRNNPL
>NZ_CP046392.1|WP_045795652.1|1592155_1592764_+|MarC-family-protein
MSESLHAFALFFSLLNPFLMSIYMLGIIRNSEARVFNRALIQGSLISFVVFIIFAKTGEAFFHDVLHVRFESFQIFGGIIFLVIGYRYVFEGADTIGVMRGAPHHLAGTIAMPFMIGPGTISAAVITGIQLNLWQLVLVIFVTLFLTCSLLILMKYAHDHLQHKHSNYIDLYVDIVGRLAALLIGTIAIDMIVTGVSGIMQS
>NZ_CP046392.1|WP_104988601.1|1590106_1592143_+|choline-transporter
MQKKTEQTTDSLNKVVFFLSATLILLFSLVTILFNDQANQLITQILNWVSRTFSWYYLLAATLYLVFVLFIALSRYGDIKLGPKHSKPEFSLLSWSAMLFSAGIGIDLMFFSVAEPLSHYMNPPVGEGQTFEAARQSMVWTLFHYGLTGWSMYALVGVALGYFSYRYNLPLTIRSALYPIFGKRINGWIGHSVDTAAVLGTIFGIATTCGIGVVQLNYGLHVLFDVPENLLIQSALIAVAVIITAISVASGVNKGLRILSEVNIYVSIGLLLFILVMGNTEFLLAALIQNFGDYISQFPQLSLTSFPFQQPKEWMNSWTLFFWAWWIAWSPFVGLFLARISRGRTIREFVAGTLIIPLLFTLTWLSIFGNSALHSVIFDGNTQLATTVLANPAHGFYDLLAQYPWFPFLAGVATITGLLFYVTSADSGALVLGNFTTKFSNIEHDSPRWLSVFWAMAIGLLTLAMLMANGVTALQNTTIIMGLPFSFVIFFVMAGLYKSLRLEDFRQASTSMNAAPVVGNVDIFNWKKRLSRVMLHANLSQTQQMLEEVCKPAMQAVATEFINKGIQVDLAEKALDDEPELSHLDLTIQLDEEENFVYQIWPIRYDTPNFSSRGKRTKKYYYRLETYLFEGSQGNDLVGYSKEQVINDILDKYERHLMFLHINRISPGKRPLFPDPDQ
>NZ_CP046392.1|WP_156188959.1|1607610_1608852_-|MFS-transporter
MDNFLEWDALFLEGGTYMLFSKTTAVDASAQLNAQGLATKLSFFGLGLSTASWAPLIPFAQQRLSLNHADFGLLLLCMGIGSMLAMPAAGLLIQRIGCRILIGVALVAAMIILPLLTVFGTALSMAIVLFIFGTAVGAFGVAINLQAVIVEKNSLKNMMSSFHGMCSLGGLLGVLTVTVLLSLGVSPLMSALIMSAVLAFIAILAVPNSLSEVEKKLDPTAEEEAPPAKQKFRPSPMILLIGLVCFIAFLSEGSAMDWSGIYLVSNFGMDASFAGLAYTFFAITMTIGRFSGRRLLRMWGEKNIITYSALCAALGLGIIVMAPHWAVVLLGYALLGFGCSNIVPVMFSRVGRQNIMPKAAALSLVSTIAYSGSLSGPALVGFLSEAIGLSTVFALVALLLLSIAVLNRFTQVD
>NZ_CP046392.1|WP_045794747.1|1609510_1609750_+|DUF2171-domain-containing-protein
MADINLTDIQKHSEVIASCGTHVGTVDHLEGSDKIKLTKQDSGDGMHHYIPTSWVEEIRGNQIILNKNSEEVTRQWEAV
>NZ_CP046392.1|WP_045794748.1|1609852_1610722_+|SDR-family-oxidoreductase
MNHYPDSPSPQEKQEHQPGVQYKMTPEPEIIKSNYQGSQKLKDKVALITGGDSGIGRSVAVLFAREGANIIIPYLEEDQDAQDTKRLVEQEGCQCLLIQCDLRQHAAVQQMVDLALQQFPHINILVNNAAVQYPQKTIEDINPEQLHKTFETNLYPLFYVTQLLIPQMQPGDSIINTTSITSYQGHNELIDYASTKGAITAFTRSLSTNLLKNKTGIRVNGVAPGPIWTPLIPSSFDEEQLKGFGEDTPMGRMGQPSEVAPAYLFLASDEASYISGQVIHVNGGTIVNG
>NZ_CP046392.1|WP_016658124.1|1610803_1610968_+|hypothetical-protein
MSRGDKSAYTDKQKRQARHIIESEKERGHSEEEAERIGWSTVNKQDGGGKKKSH
>NZ_CP046392.1|WP_156188960.1|1611068_1612472_-|iron-containing-redox-enzyme-family-protein
MSVVSQNSYRPLKLERQKSYRELFHFFLDESTPAPEKEKLSAQLLQRELHQIDSPSIPLPDEPVQIKDWLFQQNMQNCERYQQYLSRRQAGGQREYFQHVAAAYDFLVKVAPVKYVDGSWLYSSLKHWPDPNFQHLIMIYLEELGLGSAKANHVSMYQQLLSSLNLQDLVEGLEDEYYYQPVVQLALAYAPQQYLPEVIGFNLGYEQLPLHLLISNYELAELGLDHQYFNVHITIDNLDNGHAHRSVAALEYAYSQAANKTEFIDKLKRGYALNDVGLGSTEIIKNSDLTPLIEKIFKKKAVVGKLIHNNRCRFAQASVNEWLSNDQKVVEFLQVLQDKQWIKRGQHPSESRFWQLIHNEEGKMFGVFSVAEQQIIYDWIAQAYTERRAPFKAVTPVQQADDYIVDYFNSSEQQALQQQLKLARNAEEKINLLLPYLAPHQHHNPTGLWATRQLTQFLFPQALQQIQ
>NZ_CP046392.1|WP_156188961.1|1612828_1613950_-|fatty-acid-desaturase
MNMPAALHPNSKSKYLTEAQIQEFGARVEAIRREVMDDLGEKDAQYIYKIRNFVRCSEIASRGMLMFGGWIPPVWFLGTGLLGLSKIVENMELGHNVMHGQFDWMNDPTLNGASYDWDTIATGDDWKYTHNYIHHTYTNIVDKDHDVGYGLLRVSEAQKWEPRFLMNIPLAIQLMVFFEWYVGLQRLHLEDVLVYKTKTWKQVWDEAAGLRKKMRRQVVKDYVFFPLLAGPNAIPVFAGNAVANVIRSLWASAVIFNGHFTEDAENFEADNTENESRAEWYIRQIRGSSNFSGTQWLHILSGNLSHQIEHHLFPDMPANRYAEVAPKIKALCAEYGIHYNEANFIQQFSSVWVRLAKCSVPNHCRTKLGRAAT
>NZ_CP046392.1|WP_156188962.1|1613967_1614990_-|2Fe-2S-iron-sulfur-cluster-binding-domain-containing-protein
MSTSVEYKPEWIREDFIDFIAEKINPVWALKKVKACVVEIQALSPDFYKIHLRPNQNFQAQRFQAGQSILVTLAMNGVRQQRSYSIVTLLDNGDVILVIKRQGKMSNALTQLPAGAVVELSQPQGNFVLPAPVPSLCFIASGSGITAIYSLLQKAVVSSTQPIDLLYFTRDDAFHAEIKTLALMYPYFKYHHFNTVEQHQHLSLSLLQNTVEQLGERHIYACGSASMMQAAQQICQQLDLSEQFHSEYFQMTADENLEAQPVQFLRSQQDFQANSNLLDSAEAAGLRPAHGCRMGICNTCSCTKVSGSVRNLLTGEIDHNHNTQIKLCVTQAISPVVINL
>NZ_CP046392.1|WP_156188963.1|1615360_1616680_-|hypothetical-protein
MKTMMIKPLVIAVGLTMSVMANAQSSQEVEQLRQEVQQLKALVHQYAQQNQTVQANLNQLANTTVQPPVAQKSSTEKRGLGMTLGNAEFNLYGNVRMDGSYQIEGGAKDMPYNQINGVALEGNAENSDRFRSTLAATRLGLDFKTQVGAEDVKGKLEVDFLGGNLDSLRIRHAYLTYADWLIGQTWSNFAVPDYMPETVDALAYAGGAVKRTPQVRYTAKFSPQTNLVVAAEDPKDNSITQRLPALTARLNHQFADNMSVSARAMGHEKRINSDEEMAWGVGLGAKYDVTPSTTLKADYYHVKGDSSFVSFANKGVAVTNLDDKGVITATSAIAAQSEFDSITVGLTQKFNEKLRGTVGYGYMSFDQDADYLAATPADKRTGVNKDLWQAWANVFYSPIKPVSLGLEYVYGEREAVVPAANGSKTGEDNRINMVAIYNF
>NZ_CP046392.1|WP_156188964.1|1616786_1618169_-|aromatic-acid/H+-symport-family-MFS-transporter
MNTTDSVNINTVVDNAKFTPFHWGVLLWCLLIIIFDGYDLVIYGVALPLLMQEWSLGAVEAGLLASTALFGMMFGAMSFGTLSDKLGRKKTIMICVAIFSGFTFLGAFASNPIEFGILRFLAGLGIGGVMPNVVALTTEYAPKRIRSTLVAVMFSGYAIGGMTSALLGAWLVADYGWKIMFYLAGIPLLLLPLLWKFLPESLMFLTKKGETEQVRTFVQKIAPEQNIAPNTQFVLNEVMAGDEAPLRALFQQGRTFSTLMFWVAFFMCLLMVYALGSWLPKLMIQAGYSLGASMLFLFALNIGGMVGAIGGGALSDRFHLKPVLTIMFTVGAIALILLGFNSPQPVLYTLIAIAGAATIGSQILLYTFVAQFYPTTVRSTGMGWASGIGRIGAIVGPVLTGALLTLNLPHQINFMMIAIPGLIAAVAIFMVNLKVSVDGAKAKQESFANSNVKAVKSSAH
>NZ_CP046392.1|WP_005178075.1|1618460_1619375_-|LysR-family-transcriptional-regulator
MELRHLRYFVAVVEEQSFTKAAEKLFIAQPPLSRQIQNLESELGIQLFERGSRPLQTTPAGQFFYQHAVKLLSNAEEIKTMTKRVGMVEKTVTIGFVGSLLYGLLPRIVYLFRQQHPNLKIELVEMTTTNQIQALKEGRIDVGFGRLRISDPAIRRILLREEPLMVAVHDSHLFATKRQGIYLSDIVEENIFLYPNHPKPNFSTQVRGLFSEYSLEPRSLKEVREIQLALGLVAAGEGMCIVPESARTIQLPHLNYIPLLDDAAKSPIFLAIRSMDESEDIRSLFDSIYQVYDLEAIKYDRTVI

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Crispr_ID: NZ_CP046392_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046392_3

1736204-1736296

Orphan

Consensus_repeat	Method
CACTTTCCTTAGTAAAGTGGTCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046392_3

>merge|NZ_CP046392|3|1736204-1736296|CRISPRCasFinder
CACTTTCCTTAGTAAAGTGGTCTGCATCACTAGGTAAAGTACTTTCCTCTCGCTCTTTACTAGGTAAAGCACTTTCCTTAGTAAAGTGGTCTG

>NZ_CP046392|3|3|1736204-1736296|CRISPRCasFinder
CACTTTCCTTAGTAAAGTGGTCTG	CATCACTAGGTAAAGTACTTTCCTCTCGCTCTTTACTAGGTAAAG
CACTTTCCTTAGTAAAGTGGTCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046392.1\|WP_156189018.1\|1731829_1732078_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_104988792.1\|1739901_1740213_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189032.1\|1740209_1741202_+\|recombinase-RecT	unknown	unknown	gnl\|CDD\|367688
NZ_CP046392.1\|WP_156189025.1\|1735149_1735776_-\|restriction-endonuclease	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189030.1\|1738071_1738437_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189027.1\|1736725_1737034_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189029.1\|1737363_1738056_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|119397
NZ_CP046392.1\|WP_156189024.1\|1734928_1735153_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189022.1\|1733967_1734480_-\|RusA-family-crossover-junction-endodeoxyribonuclease	unknown	unknown	gnl\|CDD\|182075
NZ_CP046392.1\|WP_156189680.1\|1729698_1730166_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189021.1\|1733539_1733965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189019.1\|1732079_1732313_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189033.1\|1741546_1741915_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189028.1\|1737042_1737246_-\|XRE-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189020.1\|1732315_1732621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189023.1\|1734476_1734932_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_156189017.1\|1730165_1731827_-\|phage-head-tail-adapter-protein	unknown	unknown	gnl\|CDD\|378829
NZ_CP046392.1\|WP_156189681.1\|1741274_1741547_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046392.1\|WP_104988791.1\|1738913_1739894_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|227668
NZ_CP046392.1\|WP_156189031.1\|1738626_1738917_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046392.1\|WP_156189017.1\|1730165_1731827_-\|phage-head-tail-adapter-protein	gnl\|CDD\|378829	pfam12236, Head-tail_con, Bacteriophage head to tail connecting protein. This family of head-tail connector proteins is found in bacteria and viruses. Proteins in this family are typically between 516 and 555 amino acids in length. This protein is found in Phage T7 and T3 among others.	3.4092e-118
NZ_CP046392.1\|WP_156189032.1\|1740209_1741202_+\|recombinase-RecT	gnl\|CDD\|367688	pfam03837, RecT, RecT family. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to RecT.	2.96529e-06
NZ_CP046392.1\|WP_156189029.1\|1737363_1738056_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|119397	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell. This family includes: the lambda repressor CI/C2 family and related bacterial prophage repressor proteins; LexA (EC 3.4.21.88), the repressor of genes in the cellular SOS response to DNA damage; MucA and the related UmuD proteins, which are lesion-bypass DNA polymerases, induced in response to mitogenic DNA damage; RulA, a component of the rulAB locus that confers resistance to UV, and RuvA, which is a component of the RuvABC resolvasome that catalyzes the resolution of Holliday junctions that arise during genetic recombination and DNA repair. The LexA-like proteins contain two-domains: an N-terminal DNA binding domain and a C-terminal domain (CTD) that provides LexA dimerization as well as cleavage activity. They undergo autolysis, cleaving at an Ala-Gly or a Cys-Gly bond, separating the DNA-binding domain from the rest of the protein. In the presence of single-stranded DNA, the LexA, UmuD and MucA proteins interact with RecA, activating self cleavage, thus either derepressing transcription in the case of LexA or activating the lesion-bypass polymerase in the case of UmuD and MucA. The LexA proteins are serine proteases that carry out catalysis using a serine/lysine dyad instead of the prototypical serine/histidine/aspartic acid triad found in most serine proteases. LexA sequence homologs are found in almost all of the bacterial genomes sequenced to date, covering a large number of phyla, suggesting both, an ancient origin and a widespread distribution of lexA and the SOS response.	1.03104e-19
NZ_CP046392.1\|WP_156189022.1\|1733967_1734480_-\|RusA-family-crossover-junction-endodeoxyribonuclease	gnl\|CDD\|182075	PRK09786, PRK09786, endodeoxyribonuclease RUS; Reviewed.	1.5387e-18
NZ_CP046392.1\|WP_104988791.1\|1738913_1739894_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|227668	COG5377, COG5377, Phage-related protein, predicted endonuclease [DNA replication, recombination, and repair].	7.26971e-63

>NZ_CP046392.1|WP_156189025.1|1735149_1735776_-|restriction-endonuclease
MSNIQKFQSVFDVTFPAEIADQVLGRMQLLYGEAFDKKYGDAEHQKLVFTTCTVLNGLSEQDLRRGLERMNTEKWCPSLPEFRSWCVHDGDWWTAEQAWAKALNFTADESEKITTLAKRALDEVQNILKTEGQKAAHRAFSDIYNDYLAKAKKAGRVQVMWVKPKAIAAPQEQNKTGTKPPADLQKQIQSIYRNAGKFENTQRVGGAA
>NZ_CP046392.1|WP_156189024.1|1734928_1735153_-|hypothetical-protein
MTRLEYLSQFSNAVLSPELNTCEIPLPRHGSGWASIFDYNNSDLKDWEIEFREDWCKQQIELIGEFGAVLGGGV
>NZ_CP046392.1|WP_156189023.1|1734476_1734932_-|hypothetical-protein
MNENLRESVRAVQIGKDNTYAQMEAKRNLREQLDAELAEFLAKGGEIKHIPTGQSGEPGALFNNRLTKPKNAQKSMRAVMSAAVASAKARRETPSAIARQKALDSGEKRFNGTPCITCGGTLRYTSTNSCFACNKASAYARAQKRRAERYL
>NZ_CP046392.1|WP_156189022.1|1733967_1734480_-|RusA-family-crossover-junction-endodeoxyribonuclease
MNLRWSENQLEAHLNKHKKRKDLAVARFKKENDAKVQLLNKNSTEGITEQNSKGDEKIILDCEIAAIPPSVNHYWEKSGRGFKLSNKARDFHDVVSILVPQLNTAARLKLDVTFHFPNRLRRDIDNYLKATIDSLVKCGLCVDDEQFDELIVRRGEVVRGGLIKIKVLEI
>NZ_CP046392.1|WP_156189021.1|1733539_1733965_-|hypothetical-protein
MESLVDLVSSSADPRARARFQNLQLKKKVKAFRVQMRGYKRPDFNRMILDLCRLGWTHEKIAFVLPVANASTVSEWARGGKPNYENGDAFIELWRSETGVERVPREGEWTTYSYTIGQLDIFEDGGLCDQVIDELDRELGL
>NZ_CP046392.1|WP_156189020.1|1732315_1732621_-|hypothetical-protein
MATRKVQTPGAKPADTTIETPVDEAPAIGSVGETPEEQQDQSTNETSSLGAPVEDERLDQILENQKRIEGKLDQLLKAGGIEAPKKKRWVQGKNGYEQKEV
>NZ_CP046392.1|WP_156189019.1|1732079_1732313_-|hypothetical-protein
MCGGFVGKAIGTVTDALGLTDTKAASKGYDAQAAEAQARKEAQTAENAAKAQRKKRAASTVLSSSADTEEKKNTLGG
>NZ_CP046392.1|WP_156189018.1|1731829_1732078_-|hypothetical-protein
MCGGSFGRLFQNSGRIFGLNIKGTRERAKEQAERAKEQAEKAQSEVDGKQTKEENAAVAVRKRRASEVLSATDNGKKTTLGG
>NZ_CP046392.1|WP_156189017.1|1730165_1731827_-|phage-head-tail-adapter-protein
MNELANRLCKRLNELRAERAKYEAHWTECYRYGAPERQQCFASGEVDLSSTREKQRADLLDSTAAEAVLKIVATLIAGTTPANAQWFKAVPDGIDDPAVLTEGEHWLEQVCQFMFRNIHGANFDSENFDQMIDFVVAGWSVIYEDIDRKKGGGYVFQTWPIGECFIASTRQDNQVDTIYREYSMTAAQLVNEFGKHKVSQRVLDAYEKTPDMRFKIAQAIEPRKVQQTNTNQAQLPRNLPFASYHIEIDSKTVLKESGYNEFPCAVPRFRKVPGSVYGIGLMSNALPEAKAANALMRDTLRSAEIDVLGFWIAADDGVLNPRTVRIGGGKIVTANAVDSLKRLDSGRGFQVADPLLGRLQDSIKRKLMADGMDSPYNQPMTAAETYMRLDMIRQQIGPLYGRAQAEMLVPLLERSFGLAYRSGILGEAPEDLQGRNMSFKFISPLARAQQLEDVGAIERFMASMAPIAEMNPDALDNIDTDAIPQVLAQRLGVPTSIMRTDEKVQAYRQQKAAEQQQAAAQEQQAMMAQQVTGAVAQGMGKGIEAQMMSEVMQ
>NZ_CP046392.1|WP_156189680.1|1729698_1730166_-|hypothetical-protein
MGLIVGLIVIVLIMGAVIFRINQERNFALECVSDLAKELDELKAQGSQPEQDFKELIQEQEEELGFGQHVKWRSTKKPTSQTYRLHFDIEPNGQRILEELTARFKRNVFTDDERETCRRIGRAEVVDFIISRINTANDPRYTEQLELAHMEQNDE
>NZ_CP046392.1|WP_156189027.1|1736725_1737034_-|hypothetical-protein
MSEKLTESITFKCTYEEKRDLEAIARSENKTLSEHVRSLGMANISEIRERLNNLASLMRLTTDTVETPIFELTPEPIPKPQAQKKLNCCDQMSIFAIHSESK
>NZ_CP046392.1|WP_156189028.1|1737042_1737246_-|XRE-family-transcriptional-regulator
MNDWSQMINDLLDKDKGAMTQQQIAESISCSQNYISDLKTGKRGKRLSYEIAEGLRKLHEQKVRVAS
>NZ_CP046392.1|WP_156189029.1|1737363_1738056_+|helix-turn-helix-domain-containing-protein
MSVGNRIRALRRSLNMSQPELAKRAGVGQSTVSDLENDKKGTSAEKMDAISAVLGTTSKYLLTGNDEVITSSDLKIIQSAKNALSNDDVEIKYFEDIAFSCGSGSFAEAIEKEAKRITISRIPLRERNISKDNCIAIPAVGDSMFPTIKDKDIVYVDLGRSTIKDGKIFAVCHGGLFKFKRLYQLPLGGIRIVSDNIAEYPEERLTAQEIIDQQFEVIGWAWSWQSMENW
>NZ_CP046392.1|WP_156189030.1|1738071_1738437_+|hypothetical-protein
MLKSKIIRLSTISLFGLVLGACATTAKFESRMDAKKGLNKEQLIDVMGIPDREYKTGSFEIVEYNQSRTVSETKSDSTVVNGYVINTNSSVPYTMSCRLEFKLVDGVVESYRYKGDMCRSR
>NZ_CP046392.1|WP_156189031.1|1738626_1738917_+|hypothetical-protein
MNQYPSHSQTPKFDSNKSQTSQILYQEPTPEEMKRRSNAFNNFFAFLVLFALFFGLACMIIVTAERESANQVEATAKAASHSEIEKINAAIAGGVK
>NZ_CP046392.1|WP_104988791.1|1738913_1739894_+|YqaJ-viral-recombinase-family-protein
MNTKVNLQSIEDARQEWLQSRRLGIGGSDVAAILGLSKYRSPYQLWLDKTGRTEVEDSQSEASYWGNTLEDIVAKEYAKRNGVKVQRVNATITHPEHDWMRANIDRAIINPDISGNVRIKDGKLTTDRILECKTANQYLAKLWGDEQSEQVPDYYLTQVQWYMGITGASMCGLGVLIGGQKFRSYQVAFDPELFEMLTDECSKFWNEHVQADVPPAPTTFDDVLHRWSTHNPDQAVWADDELANLVAEYKDLNATIKEASGELDALKLQICTRMEDAEMIIAEDKRLATFKYQERNTLDSKALKAAHPDIYEQFVKTSSTRVLRIS
>NZ_CP046392.1|WP_104988792.1|1739901_1740213_+|hypothetical-protein
MSNHDSPEKIMKGIISLQNSLVQHLQSQIDELDDMGEAVAKQLDECVEDLHELLRFIVDRKLICIACDAFVDNKRISDRLEPYYEEYMEGQKVKETRLEGLKP
>NZ_CP046392.1|WP_156189032.1|1740209_1741202_+|recombinase-RecT
MNSIVKTGQNAAVNFLTPNNLQEAMQIAELLAGSDIVPKDYQRKPGNILVAMQWGAEIGLQPLQAMQNIAVINGRPSIWGDAMLALVRGSGLLDFIREEISEDGQKATVTVKRKNEEPVTSVFTMEDAKKAGLSGKQGPWTQYPKRMLKLRARSYALRDVFPDVLKGMAIAEEEKDKEIDITPAAPETSTAKANSGSSSLKARMAKKKDAVESVATEIDLTPYYQRIDNATSLDELNQIGADIADLNLGEPAKSEIGNVFKAKREELKDSQAFPAESIQAVISEINDAADLESLNAIMASRFEPFTAQMTEGQISQINSAYEAQEAALTP
>NZ_CP046392.1|WP_156189681.1|1741274_1741547_+|hypothetical-protein
MENKKLWAVNIPEEPDSEEILHPVPSKELGEQVVQRLRNEAIEAFETVGECIAEAVTLEEWDLSTDEHSKYLEENPNWWDETTFLDDEVA
>NZ_CP046392.1|WP_156189033.1|1741546_1741915_+|hypothetical-protein
MDIQNIDLRRGDFEGMHPKAKLFGFDEDKKLYTGDGVESINDQWTTWCACIGMLRLDGKESQAGLEGFVLVPKEPTDKTIARMINTPIEVNLLCDHADIFLSEGEAYIAYQAMIEAQEPTND

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046392_1	1.36\|1374402\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374402-1374433	32	NZ_CP046392.1	1731565-1731596	0	1.0
NZ_CP046392_1	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	NZ_CP046392.1	1939474-1939505	2	0.938

1. spacer 1.36|1374402|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to position: 1731565-1731596, mismatch: 0, identity: 1.0

ttaaaccattgcgcatttgccggcgtggtacc	CRISPR spacer
ttaaaccattgcgcatttgccggcgtggtacc	Protospacer
********************************

2. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to position: 1939474-1939505, mismatch: 2, identity: 0.938

cagctgctgaacttcaaccgcagtaaattccg	CRISPR spacer
caactgctgaacttcaacagcagtaaattccg	Protospacer
**.*************** *************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	NZ_CP029389	Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence	55010-55041	3	0.906
NZ_CP046392_1	1.40\|1374642\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374642-1374673	32	NC_015427	Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence	38290-38321	5	0.844
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MT939241	Enterococcus phage 9183, complete genome	44391-44421	6	0.806
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	167817-167848	6	0.812
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	168057-168088	6	0.812
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	NZ_CP016798	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence	32098-32129	6	0.812
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	NC_047983	Lactobacillus phage Lb, complete genome	26009-26040	6	0.812
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_CP034674	Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence	56378-56408	7	0.774
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_CP034674	Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence	56377-56408	7	0.781
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MT939241	Enterococcus phage 9183, complete genome	44390-44421	7	0.781
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	MT774399	CrAssphage cr109_1, complete genome	78253-78284	7	0.781
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	MT774403	CrAssphage cr113_1, complete genome	28302-28333	7	0.781
NZ_CP046392_1	1.9\|1372781\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372781-1372812	32	NZ_CP025002	Bacillus siamensis strain SCSIO 05746 plasmid pSCSIO05746, complete sequence	4375-4406	7	0.781
NZ_CP046392_1	1.20\|1373442\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373442-1373473	32	AP014334	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C59, * SEQUENCING IN PROGRESS *	16170-16201	7	0.781
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	CM009044	Acinetobacter baumannii strain ZQ5 plasmid p3ZQ5, complete sequence, whole genome shotgun sequence	1490-1521	7	0.781
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	CP015514	Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence	830811-830842	7	0.781
NZ_CP046392_1	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	NC_010391	Salmonella phage Fels-1, complete genome	2943-2974	7	0.781
NZ_CP046392_1	1.33\|1374222\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374222-1374253	32	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	497913-497944	7	0.781
NZ_CP046392_1	1.33\|1374222\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374222-1374253	32	MN812722	Vibrio phage NF, complete genome	32889-32920	7	0.781
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	MT682709	Escherichia phage vB_EcoM_SP1, complete genome	16093-16124	7	0.781
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	MN693493	Marine virus AFVG_25M300, complete genome	9054-9085	7	0.781
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NC_007930	Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence	167817-167847	8	0.742
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	CP002037	Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence	168057-168087	8	0.742
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_AP018564	Staphylococcus argenteus strain 58113 plasmid p2, complete sequence	63419-63449	8	0.742
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_CP040758	Paracoccus sp. 2251 plasmid unnamed7, complete sequence	71674-71704	8	0.742
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MK893987	Staphylococcus phage PMBT8, complete genome	22363-22393	8	0.742
NZ_CP046392_1	1.7\|1372661\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372661-1372692	32	MG592562	Vibrio phage 1.193.O._10N.286.52.C6, partial genome	102439-102470	8	0.75
NZ_CP046392_1	1.7\|1372661\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372661-1372692	32	MG592553	Vibrio phage 1.187.O._10N.286.49.F1, partial genome	105586-105617	8	0.75
NZ_CP046392_1	1.20\|1373442\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373442-1373473	32	NC_048759	Serratia phage MTx, partial genome	61957-61988	8	0.75
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	AP014136	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S34-C10, * SEQUENCING IN PROGRESS *	7801-7832	8	0.75
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	AP014135	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S32-C28, * SEQUENCING IN PROGRESS *	9363-9394	8	0.75
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MT325768	Psychrobacillus phage Perkons, complete genome	14369-14400	8	0.75
NZ_CP046392_1	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	AY266303	Bacteriophage Aeh1, complete genome	136725-136756	8	0.75
NZ_CP046392_1	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	NC_005260	Aeromonas phage Aeh1, complete genome	136725-136756	8	0.75
NZ_CP046392_1	1.33\|1374222\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374222-1374253	32	NZ_CP017942	Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence	221361-221392	8	0.75
NZ_CP046392_1	1.33\|1374222\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374222-1374253	32	MT001829	Salmonella phage SE_PL, complete genome	80936-80967	8	0.75
NZ_CP046392_1	1.33\|1374222\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374222-1374253	32	MK773491	Salmonella phage 7t3, complete genome	267798-267829	8	0.75
NZ_CP046392_1	1.38\|1374522\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374522-1374553	32	MN694017	Marine virus AFVG_250M1107, complete genome	10841-10872	8	0.75
NZ_CP046392_1	1.1\|1372422\|31\|NZ_CP046392\|PILER-CR	1372422-1372452	31	AP013396	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C99-MedDCM-OCT-S44-C25	9297-9327	9	0.71
NZ_CP046392_1	1.1\|1372422\|31\|NZ_CP046392\|PILER-CR	1372422-1372452	31	AP013648	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, * SEQUENCING IN PROGRESS *	25263-25293	9	0.71
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MN693050	Marine virus AFVG_25M448, complete genome	20665-20695	9	0.71
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MN693573	Marine virus AFVG_25M441, complete genome	20592-20622	9	0.71
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MN693121	Marine virus AFVG_25M137, complete genome	21377-21407	9	0.71
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MN693461	Marine virus AFVG_25M208, complete genome	15610-15640	9	0.71
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	MN693054	Marine virus AFVG_25M223, complete genome	15195-15225	9	0.71
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MN693050	Marine virus AFVG_25M448, complete genome	20664-20695	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MN693573	Marine virus AFVG_25M441, complete genome	20591-20622	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MN693461	Marine virus AFVG_25M208, complete genome	15610-15641	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MN693121	Marine virus AFVG_25M137, complete genome	21376-21407	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MN693054	Marine virus AFVG_25M223, complete genome	15195-15226	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_AP018564	Staphylococcus argenteus strain 58113 plasmid p2, complete sequence	63418-63449	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_CP040758	Paracoccus sp. 2251 plasmid unnamed7, complete sequence	71673-71704	9	0.719
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	MK893987	Staphylococcus phage PMBT8, complete genome	22363-22394	9	0.719
NZ_CP046392_1	1.6\|1372601\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372601-1372632	32	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	760237-760268	9	0.719
NZ_CP046392_1	1.14\|1373081\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373081-1373112	32	NZ_CP050647	Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence	3419-3450	9	0.719
NZ_CP046392_1	1.14\|1373081\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373081-1373112	32	NZ_CP034365	Pantoea sp. CCBC3-3-1 plasmid unnamed2, complete sequence	26702-26733	9	0.719
NZ_CP046392_1	1.14\|1373081\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373081-1373112	32	NZ_CP031323	Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence	18458-18489	9	0.719
NZ_CP046392_1	1.20\|1373442\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373442-1373473	32	MK327935	Escherichia phage vB_EcoM_G2494, complete genome	87844-87875	9	0.719
NZ_CP046392_1	1.20\|1373442\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373442-1373473	32	MK962753	Shigella phage JK32, complete genome	91016-91047	9	0.719
NZ_CP046392_1	1.20\|1373442\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373442-1373473	32	MN850574	Escherichia phage kaaroe, complete genome	21024-21055	9	0.719
NZ_CP046392_1	1.25\|1373742\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373742-1373773	32	NC_047865	Aeromonas phage CF7, complete genome	11213-11244	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	33011-33042	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MK250021	Prevotella phage Lak-B2, complete genome	257095-257126	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MK250028	Prevotella phage Lak-B9, complete genome	256005-256036	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MK250025	Prevotella phage Lak-B6, complete genome	254307-254338	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MK250022	Prevotella phage Lak-B3, complete genome	254322-254353	9	0.719
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MK250020	Prevotella phage Lak-B1, complete genome	255988-256019	9	0.719
NZ_CP046392_1	1.28\|1373922\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373922-1373953	32	NZ_CP031947	Ruegeria sp. AD91A plasmid unnamed1, complete sequence	247783-247814	9	0.719
NZ_CP046392_1	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	NZ_CP045303	Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence	159654-159685	9	0.719
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	NZ_CP046774	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence	43152-43183	9	0.719
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	NZ_CP013115	Shewanella xiamenensis strain T17 plasmid pSx1, complete sequence	68057-68088	9	0.719
NZ_CP046392_1	1.47\|1375063\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1375063-1375094	32	HQ332139	Prochlorococcus phage P-RSP2 genomic sequence	20515-20546	9	0.719
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	94663-94693	10	0.677
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	215318-215348	10	0.677
NZ_CP046392_1	1.2\|1372482\|31\|NZ_CP046392\|PILER-CR	1372482-1372512	31	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	186517-186547	10	0.677
NZ_CP046392_1	1.3\|1372421\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372421-1372452	32	AP013396	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C99-MedDCM-OCT-S44-C25	9296-9327	10	0.688
NZ_CP046392_1	1.3\|1372421\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372421-1372452	32	AP013648	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, * SEQUENCING IN PROGRESS *	25262-25293	10	0.688
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	MH179477	Aeromonas phage 60AhydR15PP, complete genome	72819-72850	10	0.688
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	NC_014635	Aeromonas phage phiAS4, complete genome	138184-138215	10	0.688
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	JX306041	Stenotrophomonas phage IME13, complete genome	35705-35736	10	0.688
NZ_CP046392_1	1.5\|1372541\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372541-1372572	32	MH179476	Aeromonas phage 50AhydR13PP, complete genome	32816-32847	10	0.688
NZ_CP046392_1	1.11\|1372901\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372901-1372932	32	NZ_CP011136	Escherichia coli VR50 plasmid pVR50B, complete sequence	35577-35608	10	0.688
NZ_CP046392_1	1.11\|1372901\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372901-1372932	32	NZ_CP053232	Escherichia coli strain SCU-306 plasmid pSCU-306-1, complete sequence	20332-20363	10	0.688
NZ_CP046392_1	1.11\|1372901\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372901-1372932	32	NZ_CP027324	Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence	123640-123671	10	0.688
NZ_CP046392_1	1.11\|1372901\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1372901-1372932	32	NZ_CP032516	Escherichia coli strain 118UI plasmid pEco118UIb, complete sequence	38075-38106	10	0.688
NZ_CP046392_1	1.18\|1373322\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373322-1373353	32	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	101823-101854	10	0.688
NZ_CP046392_1	1.18\|1373322\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373322-1373353	32	NZ_CP014597	Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence	121459-121490	10	0.688
NZ_CP046392_1	1.26\|1373802\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373802-1373833	32	MN855753	Bacteriophage sp. isolate 270, complete genome	4620-4651	10	0.688
NZ_CP046392_1	1.38\|1374522\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374522-1374553	32	MG945323	UNVERIFIED: Microviridae sp. isolate 1707-1801, complete genome	5523-5554	10	0.688
NZ_CP046392_1	1.44\|1374882\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374882-1374913	32	MT162468	Synechococcus phage S-H25, complete genome	127334-127365	10	0.688
NZ_CP046392_1	1.45\|1374942\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374942-1374973	32	NZ_CP024792	Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence	58936-58967	10	0.688
NZ_CP046392_1	1.47\|1375063\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1375063-1375094	32	NZ_CP046295	Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence	103210-103241	10	0.688
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_CP029436	Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence	94663-94694	11	0.656
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_CP029431	Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence	215318-215349	11	0.656
NZ_CP046392_1	1.4\|1372481\|32\|NZ_CP046392\|CRISPRCasFinder,CRT	1372481-1372512	32	NZ_CP029442	Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence	186517-186548	11	0.656
NZ_CP046392_1	1.14\|1373081\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373081-1373112	32	NZ_CP015884	Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence	27474-27505	11	0.656
NZ_CP046392_1	1.25\|1373742\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1373742-1373773	32	MF417940	Uncultured Caudovirales phage clone 3S_8, partial genome	12041-12072	11	0.656
NZ_CP046392_1	1.36\|1374402\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374402-1374433	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	346030-346061	11	0.656

1. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029389 (Acinetobacter defluvii strain WCHA30 plasmid p1_010030, complete sequence) position: , mismatch: 3, identity: 0.906

agcttga-gcattagaaataactttttgggcaa	CRISPR spacer
-gcttgatgcatttgaaataactttttgagcaa	Protospacer
 ****** ***** **************.****

2. spacer 1.40|1374642|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_015427 (Clostridium botulinum BKT015925 plasmid p4BKT015925, complete sequence) position: , mismatch: 5, identity: 0.844

aaagtaca-tcaccgagactacaaaaggccgaa	CRISPR spacer
-atgtagattcaccgaaactacaaaatgccgaa	Protospacer
 * *** * *******.********* ******

3. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MT939241 (Enterococcus phage 9183, complete genome) position: , mismatch: 6, identity: 0.806

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tctatctttcagcttgaaggaattgatagtg	Protospacer
*.*.*..***********  ***********

4. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 6, identity: 0.812

atttgtt--cttcagcttgaattaattgatagtg	CRISPR spacer
--ttgataactttagcttgagttaattgatagtt	Protospacer
  *** *  ***.*******.************

5. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 6, identity: 0.812

atttgtt--cttcagcttgaattaattgatagtg	CRISPR spacer
--ttgataactttagcttgagttaattgatagtt	Protospacer
  *** *  ***.*******.************

6. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP016798 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence) position: , mismatch: 6, identity: 0.812

actactttatttagagctaataaa----aaggtttt	CRISPR spacer
tctactttatttagagctagtaaatttgaagg----	Protospacer
 ******************.****    ****

7. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NC_047983 (Lactobacillus phage Lb, complete genome) position: , mismatch: 6, identity: 0.812

actactttatttagagctaataaa----aaggtttt	CRISPR spacer
tctactttatttagagctagtaaatttgaagg----	Protospacer
 ******************.****    ****

8. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_CP034674 (Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence) position: , mismatch: 7, identity: 0.774

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
cttgttcttcagcttgtaataattgaatctt	Protospacer
.*************** * *******   *

9. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP034674 (Vibrio anguillarum strain J360 plasmid pVaJ360, complete sequence) position: , mismatch: 7, identity: 0.781

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
acttgttcttcagcttgtaataattgaatctt	Protospacer
*.*************** * *******   *

10. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MT939241 (Enterococcus phage 9183, complete genome) position: , mismatch: 7, identity: 0.781

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
ttctatctttcagcttgaaggaattgatagtg	Protospacer
 *.*.*..***********  ***********

11. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MT774399 (CrAssphage cr109_1, complete genome) position: , mismatch: 7, identity: 0.781

actactttatttagagctaataaaaaggtttt	CRISPR spacer
actacttgattaagagctaataaatatggtaa	Protospacer
******* *** ************ * * *

12. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MT774403 (CrAssphage cr113_1, complete genome) position: , mismatch: 7, identity: 0.781

actactttatttagagctaataaaaaggtttt	CRISPR spacer
actacttgattaagagctaataaatatggtaa	Protospacer
******* *** ************ * * *

13. spacer 1.9|1372781|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025002 (Bacillus siamensis strain SCSIO 05746 plasmid pSCSIO05746, complete sequence) position: , mismatch: 7, identity: 0.781

acatcaaaatcagtctgcttgcattcgtattt	CRISPR spacer
acataaaaatcagtctgcctgcaatttctttt	Protospacer
**** *************.**** *. . ***

14. spacer 1.20|1373442|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to AP014334 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C59, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.781

tttatctttgtattcgtccaacttatctaaaa	CRISPR spacer
tttatctttgtattcgtcaatcttttgattaa	Protospacer
****************** * *** *    **

15. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to CM009044 (Acinetobacter baumannii strain ZQ5 plasmid p3ZQ5, complete sequence, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.781

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
ttgattcagaatcaaaaaataacgttattcca	Protospacer
** ** . **************.** *****.

16. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to CP015514 (Vibrio vulnificus strain FORC_036 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

ttcatattgaatcaaaaaataat----gtaattccg	CRISPR spacer
ttcatattgcaacaaaaaataattctggtaaa----	Protospacer
********* * ***********    ****

17. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_010391 (Salmonella phage Fels-1, complete genome) position: , mismatch: 7, identity: 0.781

cagctgctg-aacttcaaccgcagtaaattccg	CRISPR spacer
-attcgccgcaacttcaaccgcaataaatcccg	Protospacer
 * ..**.* *************.*****.***

18. spacer 1.33|1374222|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 7, identity: 0.781

agaggaaattattgattttctcgatcagcaga	CRISPR spacer
gcaggtaattattgatattctcgatcagtatg	Protospacer
. *** ********** ***********.* .

19. spacer 1.33|1374222|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MN812722 (Vibrio phage NF, complete genome) position: , mismatch: 7, identity: 0.781

agaggaaattattgattttctcgatcagcaga	CRISPR spacer
tgccgagattattgattttatcgatcagcatc	Protospacer
 *  **.************ **********

20. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MT682709 (Escherichia phage vB_EcoM_SP1, complete genome) position: , mismatch: 7, identity: 0.781

agcttgagcattagaaataactttttgggcaa	CRISPR spacer
tactgaagcattagaaataacttgttggccag	Protospacer
 .** .***************** **** **.

21. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MN693493 (Marine virus AFVG_25M300, complete genome) position: , mismatch: 7, identity: 0.781

agcttgagcattagaaataactttttgggcaa	CRISPR spacer
atttttagcatgagaaataactttttcagcta	Protospacer
* .** ***** ************** .** *

22. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NC_007930 (Lactobacillus salivarius UCC118 plasmid pMP118, complete sequence) position: , mismatch: 8, identity: 0.742

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tgataactttagcttgagttaattgatagtt	Protospacer
*     ***.*******.************

23. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to CP002037 (Lactobacillus salivarius CECT 5713 plasmid pHN3, complete sequence) position: , mismatch: 8, identity: 0.742

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tgataactttagcttgagttaattgatagtt	Protospacer
*     ***.*******.************

24. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_AP018564 (Staphylococcus argenteus strain 58113 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.742

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tagtttcttcagcttcaattaattcatcttc	Protospacer
*   *********** ******** **  *

25. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_CP040758 (Paracoccus sp. 2251 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.742

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
cgcgttgttcagcttgaactaattgacaagg	Protospacer
. .*** ***********.*******.*. *

26. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 8, identity: 0.742

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tatgttcttgagcttgtattaattgttgtaa	Protospacer
* ******* ****** ******** *.  .

27. spacer 1.7|1372661|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MG592562 (Vibrio phage 1.193.O._10N.286.52.C6, partial genome) position: , mismatch: 8, identity: 0.75

aggtacaccacctgcacctgaaaacactggca	CRISPR spacer
aggtacaccacctgcaccagataatgagtgga	Protospacer
****************** ** **..   * *

28. spacer 1.7|1372661|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MG592553 (Vibrio phage 1.187.O._10N.286.49.F1, partial genome) position: , mismatch: 8, identity: 0.75

aggtacaccacctgcacctgaaaacactggca	CRISPR spacer
aggtacaccacctgcaccagataatgagtgga	Protospacer
****************** ** **..   * *

29. spacer 1.20|1373442|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_048759 (Serratia phage MTx, partial genome) position: , mismatch: 8, identity: 0.75

tttatctttgtattcgtccaacttatctaaaa	CRISPR spacer
gttatctttgttttcttccaactttccaaagt	Protospacer
 ********** *** ******** .* **.

30. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to AP014136 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S34-C10, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttcatattgaatcaaaaaataatgtaattccg--	CRISPR spacer
ctcataataaatcaaaaaataatg--attagaac	Protospacer
.***** *.***************  ***  .

31. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to AP014135 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C47-MedDCM-OCT-S32-C28, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.75

ttcatattgaatcaaaaaataatgtaattccg--	CRISPR spacer
ctcataataaatcaaaaaataatg--attagaac	Protospacer
.***** *.***************  ***  .

32. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MT325768 (Psychrobacillus phage Perkons, complete genome) position: , mismatch: 8, identity: 0.75

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
agcacaagaaatcacaaaacaatgtaattccg	Protospacer
  **.*  .***** ****.************

33. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to AY266303 (Bacteriophage Aeh1, complete genome) position: , mismatch: 8, identity: 0.75

cagctg-ctgaacttcaaccgcagtaaattccg	CRISPR spacer
-atccgtttgaccttcaaccgcaataaattctt	Protospacer
 * *.* .*** ***********.*******.

34. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_005260 (Aeromonas phage Aeh1, complete genome) position: , mismatch: 8, identity: 0.75

cagctg-ctgaacttcaaccgcagtaaattccg	CRISPR spacer
-atccgtttgaccttcaaccgcaataaattctt	Protospacer
 * *.* .*** ***********.*******.

35. spacer 1.33|1374222|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

agaggaaattattgattttctcgatcagcaga	CRISPR spacer
tatcgtaattattgattggctcgatcagcagc	Protospacer
 .  * ***********  ************

36. spacer 1.33|1374222|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MT001829 (Salmonella phage SE_PL, complete genome) position: , mismatch: 8, identity: 0.75

agaggaaattattgattttctcgatcagcaga	CRISPR spacer
acaggaaattattgatatgctcgatgaagtta	Protospacer
* ************** * ****** *.   *

37. spacer 1.33|1374222|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK773491 (Salmonella phage 7t3, complete genome) position: , mismatch: 8, identity: 0.75

agaggaaattattgattttctcgatcagcaga	CRISPR spacer
acaggaaattattgatatgctcgatgaagtta	Protospacer
* ************** * ****** *.   *

38. spacer 1.38|1374522|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MN694017 (Marine virus AFVG_250M1107, complete genome) position: , mismatch: 8, identity: 0.75

gatacaaaaaagaaaagcgtcagataatgcaa	CRISPR spacer
tttctaagaaagaaaagagtcagataatgtca	Protospacer
  * .**.********* ***********. *

39. spacer 1.1|1372422|31|NZ_CP046392|PILER-CR matches to AP013396 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C99-MedDCM-OCT-S44-C25) position: , mismatch: 9, identity: 0.71

gactcggctttctaagaaaaaatttgacact	CRISPR spacer
aggtttattttctaagaaaaaatttaatact	Protospacer
.. *. ..*****************.*.***

40. spacer 1.1|1372422|31|NZ_CP046392|PILER-CR matches to AP013648 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.71

gactcggctttctaagaaaaaatttgacact	CRISPR spacer
tggtttattttctaagaaaaaatttaatact	Protospacer
 . *. ..*****************.*.***

41. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MN693050 (Marine virus AFVG_25M448, complete genome) position: , mismatch: 9, identity: 0.71

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tttgttcttcagatttaattaatccctgagt	Protospacer
************ ** *******.  *..

42. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MN693573 (Marine virus AFVG_25M441, complete genome) position: , mismatch: 9, identity: 0.71

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tttgttcttcagttttaattaatccctgagt	Protospacer
************.** *******.  *..

43. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MN693121 (Marine virus AFVG_25M137, complete genome) position: , mismatch: 9, identity: 0.71

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tttgttcttcagttttaattaatccctgagt	Protospacer
************.** *******.  *..

44. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MN693461 (Marine virus AFVG_25M208, complete genome) position: , mismatch: 9, identity: 0.71

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tttgttcttcagatttaattaatccctgagt	Protospacer
************ ** *******.  *..

45. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to MN693054 (Marine virus AFVG_25M223, complete genome) position: , mismatch: 9, identity: 0.71

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
tttgttcttcagttttaattaatccctgagt	Protospacer
************.** *******.  *..

46. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MN693050 (Marine virus AFVG_25M448, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
atttgttcttcagatttaattaatccctgagt	Protospacer
************* ** *******.  *..

47. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MN693573 (Marine virus AFVG_25M441, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
atttgttcttcagttttaattaatccctgagt	Protospacer
*************.** *******.  *..

48. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MN693461 (Marine virus AFVG_25M208, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
atttgttcttcagatttaattaatccctgagt	Protospacer
************* ** *******.  *..

49. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MN693121 (Marine virus AFVG_25M137, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
atttgttcttcagttttaattaatccctgagt	Protospacer
*************.** *******.  *..

50. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MN693054 (Marine virus AFVG_25M223, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
atttgttcttcagttttaattaatccctgagt	Protospacer
*************.** *******.  *..

51. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_AP018564 (Staphylococcus argenteus strain 58113 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
gtagtttcttcagcttcaattaattcatcttc	Protospacer
.*   *********** ******** **  *

52. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP040758 (Paracoccus sp. 2251 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
ccgcgttgttcagcttgaactaattgacaagg	Protospacer
 . .*** ***********.*******.*. *

53. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MK893987 (Staphylococcus phage PMBT8, complete genome) position: , mismatch: 9, identity: 0.719

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
gtatgttcttgagcttgtattaattgttgtaa	Protospacer
.* ******* ****** ******** *.  .

54. spacer 1.6|1372601|32|NZ_CP046392|CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atatcgtgactggatccttgatgaaaatgata	CRISPR spacer
gctacgtgaatggattcttgatgaaaatacca	Protospacer
..  ***** *****.************. .*

55. spacer 1.14|1373081|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050647 (Escherichia coli strain PapM-36-2 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719

tgtagaagataaatatcatgttgttgtatatc	CRISPR spacer
ttataaagataaatatcaggttgttataagtt	Protospacer
*   .************* ******.** .*.

56. spacer 1.14|1373081|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034365 (Pantoea sp. CCBC3-3-1 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgtagaagataaatatcatgttgttgtatatc---	CRISPR spacer
cttaaaagataaatatcatgttttt---tacggaa	Protospacer
. **.***************** **   **.

57. spacer 1.14|1373081|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031323 (Escherichia coli strain ST2350 isolate Es_ST2350_SE1_NDM_03_2018 plasmid pEsST2350_SE_2, complete sequence) position: , mismatch: 9, identity: 0.719

tgtagaagataaatatcatgttgttgtatatc	CRISPR spacer
ttataaagataaatatcaggttgttataagtt	Protospacer
*   .************* ******.** .*.

58. spacer 1.20|1373442|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK327935 (Escherichia phage vB_EcoM_G2494, complete genome) position: , mismatch: 9, identity: 0.719

tttatctttgtattcgtccaacttatctaaaa	CRISPR spacer
aaactctttgtattcttccaacatatccatag	Protospacer
    *********** ****** ****.* *.

59. spacer 1.20|1373442|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK962753 (Shigella phage JK32, complete genome) position: , mismatch: 9, identity: 0.719

tttatctttgtattcgtccaacttatctaaaa	CRISPR spacer
aaactctttgtattcttccaacatatccatag	Protospacer
    *********** ****** ****.* *.

60. spacer 1.20|1373442|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MN850574 (Escherichia phage kaaroe, complete genome) position: , mismatch: 9, identity: 0.719

tttatctttgtattcgtccaacttatctaaaa	CRISPR spacer
aaactctttgtattcttccaacatatccatag	Protospacer
    *********** ****** ****.* *.

61. spacer 1.25|1373742|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_047865 (Aeromonas phage CF7, complete genome) position: , mismatch: 9, identity: 0.719

aaccagcactgcaacaacagttgccaagattc	CRISPR spacer
cggtatctctgcaaccacagtttccaagatta	Protospacer
 . .* * ******* ****** ********

62. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
aagatattgaattaaaaaataatgaaaatgta	Protospacer
   *********.*********** ** * ..

63. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
taaatgttaaatcaaaaaataatgtacctaat	Protospacer
*  **.**.***************** .*

64. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
taaatgttaaatcaaaaaataatgtacctaat	Protospacer
*  **.**.***************** .*

65. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
taaatgttaaatcaaaaaataatgtacctaat	Protospacer
*  **.**.***************** .*

66. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
taaatgttaaatcaaaaaataatgtacctaat	Protospacer
*  **.**.***************** .*

67. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 9, identity: 0.719

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
taaatgttaaatcaaaaaataatgtacctaat	Protospacer
*  **.**.***************** .*

68. spacer 1.28|1373922|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031947 (Ruegeria sp. AD91A plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

attaagcatccatggaagttttcgagacagtt	CRISPR spacer
ccaaagcatccatggaaggtttccaggaattc	Protospacer
 . *************** **** **. * *.

69. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045303 (Azotobacter salinestris strain KACC 13899 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cagctgctgaacttcaaccgcagtaaattccg----	CRISPR spacer
cagctgctggactacaaccgcag----cctcgacgt	Protospacer
*********.*** *********    ...**

70. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046774 (Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

agcttgagcattagaaataactttttgggcaa	CRISPR spacer
gttttgagcattagaaataattttttgtaatt	Protospacer
. .*****************.****** .

71. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013115 (Shewanella xiamenensis strain T17 plasmid pSx1, complete sequence) position: , mismatch: 9, identity: 0.719

agcttgagcattagaaataactttttgggcaa	CRISPR spacer
tacttgaacattagaaataatttttcctgaat	Protospacer
 .*****.************.****.  * *

72. spacer 1.47|1375063|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to HQ332139 (Prochlorococcus phage P-RSP2 genomic sequence) position: , mismatch: 9, identity: 0.719

atccaagttcttgaaaaacagtcagatcagct	CRISPR spacer
aaagaagttcttgaaaaacaattagatgaagc	Protospacer
*   ****************.*.**** *. .

73. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_CP029436 (Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence) position: , mismatch: 10, identity: 0.677

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
gggtttcttcagcttgattttattgatcact	Protospacer
    ************* ** ****** ..

74. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_CP029431 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence) position: , mismatch: 10, identity: 0.677

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
gggtttcttcagcttgattttattgatcact	Protospacer
    ************* ** ****** ..

75. spacer 1.2|1372482|31|NZ_CP046392|PILER-CR matches to NZ_CP029442 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence) position: , mismatch: 10, identity: 0.677

tttgttcttcagcttgaattaattgatagtg	CRISPR spacer
gggtttcttcagcttgattttattgatcact	Protospacer
    ************* ** ****** ..

76. spacer 1.3|1372421|32|NZ_CP046392|CRISPRCasFinder,CRT matches to AP013396 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C99-MedDCM-OCT-S44-C25) position: , mismatch: 10, identity: 0.688

agactcggctttctaagaaaaaatttgacact	CRISPR spacer
caggtttattttctaagaaaaaatttaatact	Protospacer
 .. *. ..*****************.*.***

77. spacer 1.3|1372421|32|NZ_CP046392|CRISPRCasFinder,CRT matches to AP013648 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C99-MedDCM-OCT-S33-C45, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

agactcggctttctaagaaaaaatttgacact	CRISPR spacer
ctggtttattttctaagaaaaaatttaatact	Protospacer
  . *. ..*****************.*.***

78. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MH179477 (Aeromonas phage 60AhydR15PP, complete genome) position: , mismatch: 10, identity: 0.688

actactttatttagagctaataaaaaggtttt	CRISPR spacer
gatactttatttggagctaagaaaattatcgc	Protospacer
. **********.******* ****  .*. .

79. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NC_014635 (Aeromonas phage phiAS4, complete genome) position: , mismatch: 10, identity: 0.688

actactttatttagagctaataaaaaggtttt	CRISPR spacer
gatactttatttggagctaagaaaattatcgc	Protospacer
. **********.******* ****  .*. .

80. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to JX306041 (Stenotrophomonas phage IME13, complete genome) position: , mismatch: 10, identity: 0.688

actactttatttagagctaataaaaaggtttt	CRISPR spacer
gatactttatttggagctaagaaaattatcgc	Protospacer
. **********.******* ****  .*. .

81. spacer 1.5|1372541|32|NZ_CP046392|CRISPRCasFinder,CRT matches to MH179476 (Aeromonas phage 50AhydR13PP, complete genome) position: , mismatch: 10, identity: 0.688

actactttatttagagctaataaaaaggtttt	CRISPR spacer
gatactttatttggagctaagaaaattatcgc	Protospacer
. **********.******* ****  .*. .

82. spacer 1.11|1372901|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011136 (Escherichia coli VR50 plasmid pVR50B, complete sequence) position: , mismatch: 10, identity: 0.688

attgaaatattaactcctctcaa-------tatacttgt	CRISPR spacer
attgaaatattcacttctctcaaacgagagca-------	Protospacer
*********** ***.*******       .*

83. spacer 1.11|1372901|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053232 (Escherichia coli strain SCU-306 plasmid pSCU-306-1, complete sequence) position: , mismatch: 10, identity: 0.688

attgaaatattaactcctctcaa-------tatacttgt	CRISPR spacer
attgaaatattcacttctctcaaacgaaagca-------	Protospacer
*********** ***.*******       .*

84. spacer 1.11|1372901|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027324 (Escherichia coli strain 2013C-3033 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

attgaaatattaactcctctcaa-------tatacttgt	CRISPR spacer
attgaaatattcacttctctcaaacgagagca-------	Protospacer
*********** ***.*******       .*

85. spacer 1.11|1372901|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032516 (Escherichia coli strain 118UI plasmid pEco118UIb, complete sequence) position: , mismatch: 10, identity: 0.688

attgaaatattaactcctctcaa-------tatacttgt	CRISPR spacer
attgaaatattcacttctctcaaacgagagca-------	Protospacer
*********** ***.*******       .*

86. spacer 1.18|1373322|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 10, identity: 0.688

aacttgagcgcatggcaagaatcgaaaaatat	CRISPR spacer
tacttgagcgcatggaaaaaatcggtatgccg	Protospacer
 ************** **.*****. * ..

87. spacer 1.18|1373322|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014597 (Yangia sp. CCB-MM3 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aacttgagcgcatggcaagaatcgaaaaatat	CRISPR spacer
tccttgagcgcatggcagcaatcgatcatcgc	Protospacer
  ***************. ******  * ...

88. spacer 1.26|1373802|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MN855753 (Bacteriophage sp. isolate 270, complete genome) position: , mismatch: 10, identity: 0.688

ttcatattgaatcaaaaaataatgtaattccg	CRISPR spacer
aatatattgaatttaaaaataatgtatcggct	Protospacer
  .*********. ************ .  *

89. spacer 1.38|1374522|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MG945323 (UNVERIFIED: Microviridae sp. isolate 1707-1801, complete genome) position: , mismatch: 10, identity: 0.688

gatacaaaaaagaaaagcgtcagataatgcaa	CRISPR spacer
aaagggcaaaagaaaagcgtcagcaaatgccg	Protospacer
.* . . ****************  ***** .

90. spacer 1.44|1374882|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MT162468 (Synechococcus phage S-H25, complete genome) position: , mismatch: 10, identity: 0.688

aaaaatatcacaacaagattgtagacgttggc	CRISPR spacer
ctaaatattacaagaagattgtagaagcaata	Protospacer
  ******.**** *********** *. .

91. spacer 1.45|1374942|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024792 (Nostoc flagelliforme CCNUN1 plasmid pNFSY07, complete sequence) position: , mismatch: 10, identity: 0.688

agcttgagcattagaaataactttttgggcaa	CRISPR spacer
caagaaattattagtaataagtttttgggcaa	Protospacer
 .   .* .***** ***** ***********

92. spacer 1.47|1375063|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046295 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

atccaagttcttgaaaaacagtcagatcagct	CRISPR spacer
gcagtgaaccttgaaaaacagtctgatcagct	Protospacer
..   .. .************** ********

93. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP029436 (Klebsiella quasipneumoniae strain CAV2013 plasmid pKPC_CAV2013, complete sequence) position: , mismatch: 11, identity: 0.656

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
cgggtttcttcagcttgattttattgatcact	Protospacer
     ************* ** ****** ..

94. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP029431 (Klebsiella quasipneumoniae strain CAV2018 plasmid pKPC_CAV2018-435, complete sequence) position: , mismatch: 11, identity: 0.656

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
cgggtttcttcagcttgattttattgatcact	Protospacer
     ************* ** ****** ..

95. spacer 1.4|1372481|32|NZ_CP046392|CRISPRCasFinder,CRT matches to NZ_CP029442 (Klebsiella quasipneumoniae strain CAV1947 plasmid pKPC_CAV1947-412, complete sequence) position: , mismatch: 11, identity: 0.656

atttgttcttcagcttgaattaattgatagtg	CRISPR spacer
cgggtttcttcagcttgattttattgatcact	Protospacer
     ************* ** ****** ..

96. spacer 1.14|1373081|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 11, identity: 0.656

tgtagaagataaatatcatgttgttgtatatc	CRISPR spacer
attagaagataaacatcatgttttttctggat	Protospacer
  ***********.******** ** .  . .

97. spacer 1.25|1373742|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to MF417940 (Uncultured Caudovirales phage clone 3S_8, partial genome) position: , mismatch: 11, identity: 0.656

aaccagcactgcaacaacagttgccaagattc	CRISPR spacer
tgaagaagctgcaacagcaattgccaagattg	Protospacer
 .  .. .********.**.***********

98. spacer 1.36|1374402|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 11, identity: 0.656

ttaaaccattgcgcatttgccggcgtggtacc	CRISPR spacer
cgccaccaatgcgcctttgccggcgtgcccgt	Protospacer
.   **** ***** ************ .  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

89295 : 234414

118

Escherichia_phage(27.78%)

transposase,integrase,tRNA

attL 119916:119975|attR 141385:141472

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156188694.1\|89295_90336_-\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	4.0e-175	83.5
WP_016658872.1\|90506_92105_-	hypothetical protein	NA	NA	NA	NA
WP_156188695.1\|92219_93752_-	TniQ family protein	NA	NA	NA	NA
WP_016165661.1\|93754_95437_-	AAA family ATPase	NA	NA	NA	NA
WP_156188696.1\|95471_97622_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_016165659.1\|97605_98409_-\|transposase	heteromeric transposase endonuclease subunit TnsA	NA	NA	NA	NA
WP_156188697.1\|98562_100401_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A0A1J0F994	Only_Syngen_Nebraska_virus	1.6e-126	42.3
WP_045795572.1\|100413_101778_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	2.5e-28	36.4
WP_171501533.1\|101796_102273_-	phosphatidylglycerophosphatase A	NA	NA	NA	NA
WP_045795571.1\|102295_103213_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_045795570.1\|103229_103679_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_005181338.1\|103683_104154_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.9e-34	53.3
WP_156188699.1\|104173_105289_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.0e-56	36.0
WP_002058193.1\|105849_106086_-	DUF2132 domain-containing protein	NA	NA	NA	NA
WP_104989280.1\|106454_106757_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_104989279.1\|106956_108048_+	hypothetical protein	NA	NA	NA	NA
WP_156188700.1\|109377_112725_+	SWIM zinc finger family protein	Q2NP48	Hyphantria_cunea_nuclear_polyhedrosis_virus	2.0e-50	31.2
WP_156188701.1\|112742_114032_-	HipA domain-containing protein	NA	NA	NA	NA
WP_156188702.1\|114028_114337_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156188703.1\|115065_115278_+	hypothetical protein	NA	NA	NA	NA
WP_156188704.1\|115340_116642_+	hypothetical protein	NA	NA	NA	NA
WP_104498520.1\|118122_118896_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.4e-76	57.0
WP_156188705.1\|118895_119915_-\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-79	45.8
119916:119975	attL	NA	NA	NA	NA
WP_156188706.1\|120831_121380_-	DNA-binding protein	NA	NA	NA	NA
WP_156188707.1\|121379_122522_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156189665.1\|122936_126149_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_156188708.1\|126123_128451_-	hypothetical protein	NA	NA	NA	NA
WP_156188709.1\|128450_129122_-	hypothetical protein	NA	NA	NA	NA
WP_156188710.1\|130218_131238_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	3.6e-80	45.8
WP_001053379.1\|131237_132011_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156188711.1\|132872_133256_+\|transposase	transposase	NA	NA	NA	NA
WP_160243458.1\|133252_133588_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_156188713.1\|133662_135267_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	6.6e-145	53.8
WP_156188714.1\|135404_137144_-	protein kinase family protein	NA	NA	NA	NA
WP_156188715.1\|137154_137883_-	hypothetical protein	NA	NA	NA	NA
WP_156188716.1\|137882_138716_-	VWA domain-containing protein	NA	NA	NA	NA
WP_156188717.1\|139232_140165_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	3.3e-56	40.8
WP_104498419.1\|140260_140590_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_016658949.1\|140741_141332_+	class I SAM-dependent methyltransferase	A0A2H4J5G6	uncultured_Caudovirales_phage	1.5e-30	80.0
WP_156188705.1\|141444_142464_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-79	45.8
141385:141472	attR	NA	NA	NA	NA
WP_156188718.1\|142463_143237_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	2.0e-75	56.6
WP_156188719.1\|143299_144337_+	HNH endonuclease	A0A2I2MUI7	uncultured_Caudovirales_phage	1.3e-77	63.4
WP_156188720.1\|144562_146131_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-163	56.7
WP_156188721.1\|146130_147354_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	1.3e-28	29.4
WP_156188722.1\|147364_148276_+	hypothetical protein	NA	NA	NA	NA
WP_156188723.1\|148304_151181_+	HsdR family type I site-specific deoxyribonuclease	NA	NA	NA	NA
WP_156188724.1\|151458_152202_-	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	5.2e-44	37.1
WP_156188725.1\|152212_152815_-	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_156188726.1\|152887_153136_-	hypothetical protein	NA	NA	NA	NA
WP_156188727.1\|153128_154310_-	DUF3596 domain-containing protein	A0A1W6JTA0	Pseudomonas_phage	1.5e-40	30.9
WP_001054887.1\|154323_154539_-	hypothetical protein	NA	NA	NA	NA
WP_004280956.1\|154649_154856_+	helix-turn-helix transcriptional regulator	S5MTW4	Brevibacillus_phage	4.6e-11	56.5
WP_104989276.1\|155678_155987_+	BolA family transcriptional regulator	NA	NA	NA	NA
WP_104989275.1\|156019_156412_+	SirB2 family protein	NA	NA	NA	NA
WP_104989274.1\|156492_157335_+	ParA family protein	J9QE36	Clostridium_phage	6.8e-08	25.7
WP_156188728.1\|157342_157735_+	hypothetical protein	NA	NA	NA	NA
WP_104989273.1\|157954_158548_+	threonine transporter RhtB	NA	NA	NA	NA
WP_045795565.1\|158544_159183_-	DedA family protein	NA	NA	NA	NA
WP_104989272.1\|159376_159793_+	DoxX family protein	NA	NA	NA	NA
WP_016658965.1\|160012_161581_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	8.7e-25	32.3
WP_016658966.1\|161787_163056_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_104989271.1\|163374_164322_+	pirin family protein	NA	NA	NA	NA
WP_045795560.1\|164453_165113_+	glutathione S-transferase	NA	NA	NA	NA
WP_104989270.1\|166350_166971_-	SPOR domain-containing protein	NA	NA	NA	NA
WP_075168077.1\|167056_168847_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	5.3e-18	21.7
WP_104989269.1\|169031_169310_+	DUF2798 domain-containing protein	NA	NA	NA	NA
WP_045796811.1\|169313_169919_-	hypothetical protein	NA	NA	NA	NA
WP_104989268.1\|170286_171987_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_104989267.1\|172155_175050_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.1e-278	52.7
WP_156188729.1\|175046_176657_+	hypothetical protein	A0A2H4JDB4	uncultured_Caudovirales_phage	1.9e-11	31.2
WP_045796651.1\|176643_177348_+	hypothetical protein	NA	NA	NA	NA
WP_045796650.1\|177505_177904_+	hypothetical protein	NA	NA	NA	NA
WP_156188730.1\|177944_178865_-	Dyp-type peroxidase	NA	NA	NA	NA
WP_005181385.1\|179023_179644_+	LysE family transporter	NA	NA	NA	NA
WP_104989264.1\|179708_180509_-	metal ABC transporter permease	NA	NA	NA	NA
WP_104989263.1\|180512_181304_-	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-14	30.2
WP_005181393.1\|181276_181774_-	transcriptional repressor	NA	NA	NA	NA
WP_156188731.1\|181910_182750_+	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_104989260.1\|182922_183315_+	ATP synthase subunit I	NA	NA	NA	NA
WP_104989259.1\|183427_184303_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_104989258.1\|184383_184629_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_005181403.1\|184669_185140_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_045796645.1\|185152_185689_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_005181412.1\|185735_187280_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_005181426.1\|187366_188236_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_005181429.1\|188262_189657_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_005181432.1\|189683_190103_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_156188705.1\|190720_191740_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-79	45.8
WP_104851834.1\|191739_192513_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156188713.1\|193507_195112_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	6.6e-145	53.8
WP_160243458.1\|195186_195522_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_156188711.1\|195518_195902_-\|transposase	transposase	NA	NA	NA	NA
WP_155757101.1\|197010_198230_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.8e-79	53.2
WP_104989256.1\|198657_199839_-	SIR2 family protein	NA	NA	NA	NA
WP_076754343.1\|199894_200857_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_045796643.1\|201011_202010_-	pirin family protein	NA	NA	NA	NA
WP_104989255.1\|202131_202740_-	hypothetical protein	NA	NA	NA	NA
WP_045796641.1\|202922_203465_-	glutathione peroxidase	NA	NA	NA	NA
WP_045796654.1\|203793_204705_+	DMT family transporter	NA	NA	NA	NA
WP_104989252.1\|205085_205652_-	Sua5/YciO/YrdC/YwlC family protein	S4VW33	Pandoravirus	3.9e-07	24.7
WP_104989251.1\|205696_206839_-	DNA-protecting protein DprA	S6BFL3	Thermus_phage	7.7e-23	38.5
WP_104989250.1\|206855_208013_-	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.1e-08	55.1
WP_005181462.1\|208132_208657_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.2e-17	42.6
WP_016658991.1\|208747_209170_+	DUF2946 family protein	NA	NA	NA	NA
WP_156188732.1\|209243_211295_+	TonB-dependent copper receptor	NA	NA	NA	NA
WP_005176703.1\|211429_212581_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_104989248.1\|218895_220125_+	MFS transporter	NA	NA	NA	NA
WP_156188733.1\|220243_222643_+	YgiQ family radical SAM protein	M1QSD9	Pseudomonas_phage	1.5e-116	79.6
WP_156188734.1\|222958_223492_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_005181474.1\|223530_223884_-	RidA family protein	NA	NA	NA	NA
WP_045795358.1\|224350_225406_-	DNA polymerase IV	NA	NA	NA	NA
WP_156188735.1\|225415_226429_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_156188736.1\|226483_227269_-	lysozyme	NA	NA	NA	NA
WP_156188737.1\|227344_228736_-	multidrug transporter subunit MdtD	NA	NA	NA	NA
WP_171501534.1\|228945_230727_+	alkaline phosphatase	NA	NA	NA	NA
WP_005176703.1\|230779_231931_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_045795363.1\|232166_233132_+	hypothetical protein	NA	NA	NA	NA
WP_156188739.1\|233191_234414_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

517746 : 566761

Escherichia_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104989127.1\|517746_519201_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_171456158.1\|519479_521438_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	9.9e-10	32.9
WP_045796419.1\|521513_522167_+	ribonuclease I	NA	NA	NA	NA
WP_005182191.1\|522345_523332_+	malate dehydrogenase	NA	NA	NA	NA
WP_104989125.1\|523444_524749_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_104988188.1\|524862_525882_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-80	45.8
WP_001053379.1\|525881_526655_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_005182193.1\|526885_527140_+	DUF2789 family protein	NA	NA	NA	NA
WP_104989124.1\|527287_527548_+	DUF2789 family protein	NA	NA	NA	NA
WP_005182199.1\|527658_527916_+	DUF2789 family protein	NA	NA	NA	NA
WP_104989123.1\|528010_528538_-	hypothetical protein	NA	NA	NA	NA
WP_104989122.1\|528598_529201_-	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_005182209.1\|529317_530175_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA
WP_075168287.1\|530222_531047_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_104989121.1\|531071_532160_+	hypothetical protein	NA	NA	NA	NA
WP_156188747.1\|532266_533295_+\|transposase	transposase	NA	NA	NA	NA
WP_104989120.1\|539230_540619_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA
WP_075168317.1\|540701_541892_-	hypothetical protein	NA	NA	NA	NA
WP_045796347.1\|542090_542513_-	hypothetical protein	NA	NA	NA	NA
WP_005182227.1\|542505_542841_-	TIGR01244 family phosphatase	NA	NA	NA	NA
WP_045796346.1\|542966_543863_+	alpha/beta fold hydrolase	A2RQC8	Archaeal_BJ1_virus	4.1e-27	33.1
WP_045796345.1\|543863_544295_+	thioredoxin TrxC	A0A1V0SD63	Indivirus	8.8e-12	33.3
WP_045796344.1\|544312_544735_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_104989119.1\|544799_545306_-	DUF4442 domain-containing protein	NA	NA	NA	NA
WP_005182257.1\|545334_545823_-	YajQ family cyclic di-GMP-binding protein	NA	NA	NA	NA
WP_005182260.1\|545914_546229_+	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_171456185.1\|546416_548294_-	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	NA	NA	NA	NA
WP_104989117.1\|548324_548807_-	hypothetical protein	NA	NA	NA	NA
WP_005182271.1\|548812_549115_-	hypothetical protein	NA	NA	NA	NA
WP_005182273.1\|549146_549758_-	septation protein IspZ	NA	NA	NA	NA
WP_104989116.1\|549802_550678_+	PHP domain-containing protein	NA	NA	NA	NA
WP_104989115.1\|550726_551638_-	bestrophin	NA	NA	NA	NA
WP_104989114.1\|551708_552404_-	DNA repair protein RadC	NA	NA	NA	NA
WP_104989113.1\|552517_553792_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	6.0e-40	31.7
WP_104989111.1\|553865_554324_-	protein-export chaperone SecB	NA	NA	NA	NA
WP_005182284.1\|554364_554622_-	glutaredoxin 3	A0A248SKD6	Salicola_phage	3.5e-08	41.5
WP_005182291.1\|554642_555050_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_005182294.1\|555146_556205_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA
WP_005182297.1\|556330_556885_+	oligoribonuclease	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	7.8e-29	40.7
WP_005176703.1\|556979_558131_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156188769.1\|558417_559152_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA
WP_005182307.1\|559300_560104_+	enoyl-ACP reductase	NA	NA	NA	NA
WP_171501504.1\|560246_563048_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	9.3e-288	54.0
WP_156188771.1\|563461_564552_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_001094417.1\|565114_566761_-\|transposase	IS66-like element ISAba16 family transposase	A0A218MNE7	uncultured_virus	1.5e-144	54.4

DBSCAN-SWA_3

714599 : 768533

Escherichia_phage(21.43%)

tRNA,integrase,transposase

attL 709942:709958|attR 766136:766152

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
709942:709958	attL	NA	NA	NA	NA
WP_045796113.1\|714599_715331_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_016659465.1\|715411_716368_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.0e-60	42.7
WP_104989055.1\|716615_719672_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.9e-78	47.5
WP_016659463.1\|719736_720024_-	hypothetical protein	NA	NA	NA	NA
WP_005179812.1\|720226_720499_-	cell division topological specificity factor MinE	NA	NA	NA	NA
WP_005179808.1\|720501_721314_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_104989054.1\|721382_722111_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_104989053.1\|722233_723283_-	hypothetical protein	NA	NA	NA	NA
WP_104989052.1\|723287_724226_-	acyltransferase	NA	NA	NA	NA
WP_104989051.1\|724468_725122_+	OmpA family protein	NA	NA	NA	NA
WP_005179787.1\|725249_727289_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.8e-110	37.6
WP_045796105.1\|727320_727773_+	dUTP diphosphatase	G0YQD9	Erwinia_phage	3.0e-47	64.2
WP_051061469.1\|727867_728800_-\|transposase	IS5-like element ISAba12 family transposase	Q1MVF0	Enterobacteria_phage	3.5e-58	40.7
WP_104989050.1\|729004_730429_+	phosphomannomutase/phosphoglucomutase	A0A127AWJ1	Bacillus_phage	9.6e-39	26.6
WP_005179783.1\|730439_731342_+	acetylglutamate kinase	NA	NA	NA	NA
WP_045796103.1\|731456_732269_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_045796102.1\|732355_733204_+	class II glutamine amidotransferase	NA	NA	NA	NA
WP_005179777.1\|733461_733917_+	bacteriohemerythrin	NA	NA	NA	NA
WP_104989049.1\|734083_735166_+	hypothetical protein	NA	NA	NA	NA
WP_045796100.1\|735165_735489_+	RnfH family protein	NA	NA	NA	NA
WP_005179773.1\|735531_735930_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_005179771.1\|736042_736480_+	ferric iron uptake transcriptional regulator	NA	NA	NA	NA
WP_005179770.1\|736553_737672_-	PilT/PilU family type 4a pilus ATPase	NA	NA	NA	NA
WP_104989048.1\|737699_738737_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA
WP_104989047.1\|738860_739547_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_045796097.1\|739592_740690_-	acyltransferase	NA	NA	NA	NA
WP_104989046.1\|740693_744299_-	AAA family ATPase	NA	NA	NA	NA
WP_104989045.1\|744308_745559_-	exonuclease SbcCD subunit D C-terminal domain-containing protein	NA	NA	NA	NA
WP_035363315.1\|745966_746428_+	hypothetical protein	NA	NA	NA	NA
WP_104989044.1\|746482_747607_-	glycine oxidase ThiO	NA	NA	NA	NA
WP_156188811.1\|747623_748637_-	porphobilinogen synthase	NA	NA	NA	NA
WP_045796092.1\|748745_749243_+	thioesterase family protein	NA	NA	NA	NA
WP_104989043.1\|749365_750850_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_156188812.1\|751527_752664_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4J339	uncultured_Caudovirales_phage	4.5e-71	38.6
WP_156188813.1\|753051_754584_+	hypothetical protein	NA	NA	NA	NA
WP_156188814.1\|754880_755501_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_104987963.1\|755771_756980_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-51	51.3
WP_104851834.1\|757925_758699_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156188815.1\|759149_759422_+	hypothetical protein	NA	NA	NA	NA
WP_104988037.1\|759857_761077_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.6e-77	52.6
WP_156188816.1\|761942_763016_+	YqaJ viral recombinase family protein	A0A139ZPJ9	Marinitoga_camini_virus	5.7e-44	40.6
WP_156188817.1\|763291_764188_+	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_156188818.1\|764283_764511_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_156189668.1\|764585_765146_+	methyltransferase domain-containing protein	A0A2H4J2Z2	uncultured_Caudovirales_phage	2.0e-16	69.5
WP_155757101.1\|765128_766348_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.8e-79	53.2
766136:766152	attR	NA	NA	NA	NA
WP_156188819.1\|766886_768533_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.2e-145	53.6

DBSCAN-SWA_4

794060 : 830627

uncultured_virus(30.0%)

transposase,integrase,tRNA

attL 797295:797309|attR 822802:822816

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004729405.1\|794060_795086_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.9e-26	30.7
WP_005247051.1\|795206_795938_-	Fic family protein	A0A1V0E025	Clostridioides_phage	1.1e-11	26.2
WP_005247050.1\|796100_796778_-	cupin domain-containing protein	NA	NA	NA	NA
797295:797309	attL	NA	NA	NA	NA
WP_156188826.1\|798334_798544_-\|integrase	tyrosine-type recombinase/integrase	G3EN73	Psychrobacter_phage	2.7e-22	76.6
WP_001055589.1\|798735_799119_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|799115_799451_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001094417.1\|799525_801172_+\|transposase	IS66-like element ISAba16 family transposase	A0A218MNE7	uncultured_virus	1.5e-144	54.4
WP_156188827.1\|801339_802525_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.6e-39	34.7
WP_104987963.1\|802683_803892_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-51	51.3
WP_104989403.1\|803884_804028_+	hypothetical protein	NA	NA	NA	NA
WP_104989027.1\|804168_805035_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_045796663.1\|805552_807538_+	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA
WP_156188828.1\|807555_808815_+	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA
WP_168370238.1\|809383_809578_-	hypothetical protein	NA	NA	NA	NA
WP_104989026.1\|809957_811154_+	peptide antibiotic transporter SbmA	NA	NA	NA	NA
WP_104989025.1\|811384_812350_+	hypothetical protein	NA	NA	NA	NA
WP_104989024.1\|812485_812986_+	hypothetical protein	NA	NA	NA	NA
WP_045796669.1\|812999_813221_-	hypothetical protein	NA	NA	NA	NA
WP_156188829.1\|813534_814640_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.0e-40	36.5
WP_075167893.1\|814836_814980_+	hypothetical protein	NA	NA	NA	NA
WP_075167930.1\|815265_815487_+	hypothetical protein	NA	NA	NA	NA
WP_087662590.1\|815586_815847_+	hypothetical protein	NA	NA	NA	NA
WP_087662589.1\|816423_816822_+	VOC family protein	NA	NA	NA	NA
WP_087662588.1\|817356_818022_+	RNA pseudouridine synthase	NA	NA	NA	NA
WP_016659844.1\|818186_818567_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_016659847.1\|819483_819828_+	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_087662587.1\|819921_820287_+	5-carboxymethyl-2-hydroxymuconate Delta-isomerase	NA	NA	NA	NA
WP_156188830.1\|820466_822932_+	AI-2E family transporter	NA	NA	NA	NA
822802:822816	attR	NA	NA	NA	NA
WP_104989402.1\|823007_823412_+	NUDIX domain-containing protein	E5DQR1	Aeromonas_phage	5.2e-06	41.3
WP_104989021.1\|823494_824418_-\|tRNA	tRNA-dihydrouridine synthase	NA	NA	NA	NA
WP_001280601.1\|824595_825921_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_104989020.1\|826148_826547_+	hypothetical protein	NA	NA	NA	NA
WP_104987963.1\|826798_828007_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-51	51.3
WP_104989019.1\|828107_828503_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004779823.1\|828499_828730_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_156188831.1\|829296_829653_-	hypothetical protein	NA	NA	NA	NA
WP_004811110.1\|829694_830627_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	40.9

DBSCAN-SWA_5

964212 : 1012885

Escherichia_phage(22.22%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156188705.1\|964212_965232_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	1.0e-79	45.8
WP_104851834.1\|965231_966005_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156188855.1\|966001_966358_-	hypothetical protein	NA	NA	NA	NA
WP_156188856.1\|967372_967861_+	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA
WP_045796467.1\|967921_969652_-	flotillin family protein	NA	NA	NA	NA
WP_104988957.1\|969677_970325_-	YqiJ family protein	NA	NA	NA	NA
WP_005176282.1\|970733_971747_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_104988956.1\|971895_972366_-\|transposase	transposase	NA	NA	NA	NA
WP_171501507.1\|972313_972709_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_045796470.1\|972870_973797_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_005176288.1\|973844_974750_+	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_104988954.1\|974803_975217_+	MGMT family protein	NA	NA	NA	NA
WP_005176293.1\|975268_975706_-	universal stress protein	NA	NA	NA	NA
WP_045796473.1\|976024_976648_-	CatB-related O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	2.2e-16	34.9
WP_156188858.1\|976737_976953_-	hypothetical protein	NA	NA	NA	NA
WP_004811110.1\|976994_977927_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	40.9
WP_156188859.1\|977938_978289_-	hypothetical protein	NA	NA	NA	NA
WP_104988950.1\|978378_978855_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_104988949.1\|978947_982178_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_104988948.1\|982192_983332_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA
WP_005176311.1\|983643_984135_+	hypothetical protein	NA	NA	NA	NA
WP_075167187.1\|984229_984769_-	DOMON-like domain-containing protein	NA	NA	NA	NA
WP_005176314.1\|984778_985102_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_016659946.1\|985298_985949_+	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_005176319.1\|986083_987973_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	1.7e-107	47.0
WP_016659947.1\|988233_988887_+	YitT family protein	NA	NA	NA	NA
WP_104988072.1\|988922_990152_-\|transposase	transposase	NA	NA	NA	NA
WP_171456178.1\|990463_991306_+	dihydropteroate synthase	S4W084	Pandoravirus	5.5e-18	31.5
WP_171456154.1\|991456_991747_+	hypothetical protein	NA	NA	NA	NA
WP_104988945.1\|992390_994160_+	alkaline phosphatase D family protein	NA	NA	NA	NA
WP_104988944.1\|994199_994931_-	hypothetical protein	NA	NA	NA	NA
WP_005176331.1\|995349_996198_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.5e-26	35.6
WP_034597408.1\|996396_997065_+	methyltransferase	NA	NA	NA	NA
WP_104988943.1\|997093_997528_-	hypothetical protein	NA	NA	NA	NA
WP_104988942.1\|997702_999532_-	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA
WP_156188860.1\|999949_1000888_+	diacylglycerol kinase	NA	NA	NA	NA
WP_104499884.1\|1000868_1001627_+	metallophosphoesterase	NA	NA	NA	NA
WP_004810787.1\|1001827_1002118_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	1.0e-16	51.1
WP_156188861.1\|1002175_1003810_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.9e-177	61.2
WP_156188862.1\|1004012_1005167_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_005176354.1\|1005229_1006369_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_156188863.1\|1006658_1009751_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_104988937.1\|1009866_1011204_+	magnesium transporter	NA	NA	NA	NA
WP_104988936.1\|1011292_1011886_+	DUF4112 domain-containing protein	NA	NA	NA	NA
WP_005176364.1\|1011979_1012885_-\|protease	protease HtpX	NA	NA	NA	NA

DBSCAN-SWA_6

1045403 : 1051327

Acinetobacter_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156188869.1\|1045403_1046765_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	9.9e-17	32.8
WP_005176472.1\|1046876_1047233_-	DUF861 domain-containing protein	NA	NA	NA	NA
WP_005176473.1\|1047329_1047878_-	GTP cyclohydrolase I FolE	A0A0P0HSD2	Acinetobacter_phage	3.4e-93	95.1
WP_104988907.1\|1047971_1048655_-	Smr/MutS family protein	A0A0P0IDT4	Acinetobacter_phage	9.2e-88	75.1
WP_104988906.1\|1048861_1049668_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.3e-127	84.7
WP_016659977.1\|1049685_1050732_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	5.2e-167	87.1
WP_171065072.1\|1050751_1051327_-	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	A0A0P0IKJ1	Acinetobacter_phage	1.0e-103	93.7

DBSCAN-SWA_7

1270447 : 1398225

108

Enterobacteria_phage(10.34%)

tRNA,integrase,protease,transposase

attL 1311216:1311232|attR 1369894:1370757

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075166682.1\|1270447_1271164_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_104989385.1\|1271384_1273793_+	ExeM/NucH family extracellular endonuclease	NA	NA	NA	NA
WP_104988819.1\|1273865_1275311_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	5.5e-167	63.7
WP_005177091.1\|1275528_1276140_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_104988818.1\|1276259_1277045_-	thiazole synthase	NA	NA	NA	NA
WP_005177095.1\|1277057_1277255_-	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_005177099.1\|1277287_1277653_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_005177101.1\|1277874_1278744_-	RNA polymerase sigma factor RpoH	A0A248SJA5	Salicola_phage	1.8e-43	39.5
WP_104988817.1\|1278880_1279117_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_005177104.1\|1279502_1279715_+	cold-shock protein	A0A1X9IGI9	Lactococcus_phage	1.9e-12	50.0
WP_005177106.1\|1279810_1280962_+	ATP-dependent RNA helicase RhlB	A0A1B1IS59	uncultured_Mediterranean_phage	3.0e-51	32.7
WP_104488774.1\|1281074_1281455_-	hypothetical protein	NA	NA	NA	NA
WP_104471847.1\|1281679_1282255_+	nitroreductase family protein	NA	NA	NA	NA
WP_104988816.1\|1282285_1283359_+	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_156188903.1\|1283443_1283899_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA
WP_075175183.1\|1283932_1285072_+	general secretion pathway protein GspL	NA	NA	NA	NA
WP_104988814.1\|1285071_1285551_+	type II secretion system protein M	NA	NA	NA	NA
WP_104988813.1\|1285641_1286643_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_104988812.1\|1286647_1287223_+	CvpA family protein	NA	NA	NA	NA
WP_005177128.1\|1287247_1288786_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.6e-85	39.6
WP_104988811.1\|1288876_1290766_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_104988810.1\|1290902_1291574_+	hypothetical protein	NA	NA	NA	NA
WP_104988809.1\|1291570_1292539_+	D-glycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.5e-19	27.3
WP_156188904.1\|1292621_1294061_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_156188905.1\|1294099_1294495_+	GFA family protein	NA	NA	NA	NA
WP_171456147.1\|1294543_1294900_+	hypothetical protein	NA	NA	NA	NA
WP_005177146.1\|1295019_1295466_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	3.8e-18	41.5
WP_001136722.1\|1295499_1295715_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_156188906.1\|1295862_1296879_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.5e-123	66.4
WP_004811110.1\|1296941_1297874_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	40.9
WP_000644963.1\|1298621_1299299_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_104988804.1\|1299579_1300452_-	ATP-binding protein	NA	NA	NA	NA
WP_156188907.1\|1300632_1302147_+	DUF3336 domain-containing protein	NA	NA	NA	NA
WP_156188908.1\|1302112_1302949_+	protein kinase	A0A1V0SBL0	Catovirus	1.1e-05	33.3
WP_005177162.1\|1303701_1303905_-	hypothetical protein	NA	NA	NA	NA
WP_156188909.1\|1304358_1304631_+	hypothetical protein	NA	NA	NA	NA
WP_156188910.1\|1304646_1305381_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_156188911.1\|1305508_1307485_+	acyltransferase family protein	B5WZU0	Pseudomonas_phage	3.0e-54	34.3
WP_005177173.1\|1307545_1308778_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_005177175.1\|1308933_1309353_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_016658341.1\|1309349_1309832_+	glutathione peroxidase	NA	NA	NA	NA
WP_156188912.1\|1309956_1311126_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_156188913.1\|1311150_1313814_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
1311216:1311232	attL	NA	NA	NA	NA
WP_171501509.1\|1313837_1315052_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
1311216:1311232	attL	NA	NA	NA	NA
WP_016658337.1\|1315232_1315580_-	L-valine transporter subunit YgaH	NA	NA	NA	NA
WP_156188915.1\|1315569_1316328_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_016658335.1\|1316430_1316925_+	hypothetical protein	NA	NA	NA	NA
WP_005177206.1\|1317278_1318370_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_156188916.1\|1318692_1319457_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA
WP_005177212.1\|1321589_1322060_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_016658332.1\|1322111_1322861_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_104989383.1\|1322970_1323537_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_043972784.1\|1324562_1325762_+\|integrase	tyrosine-type recombinase/integrase	A0A1B0VMI6	Pseudomonas_phage	2.0e-45	30.9
WP_171501510.1\|1326230_1326473_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_087554624.1\|1326475_1327635_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.7e-49	38.4
WP_043972788.1\|1327925_1328252_-	helix-turn-helix transcriptional regulator	A0A288WFW4	Bacillus_phage	8.4e-07	32.4
WP_081378479.1\|1328399_1328732_+	hypothetical protein	NA	NA	NA	NA
WP_121533679.1\|1328728_1329295_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_075696606.1\|1329284_1329740_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004645384.1\|1329860_1330607_+\|transposase	IS5-like element ISAba31 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.6e-13	35.0
WP_052690212.1\|1330626_1330872_+	hypothetical protein	NA	NA	NA	NA
1330701:1330717	attR	NA	NA	NA	NA
WP_045796736.1\|1330973_1331993_-	AraC family transcriptional regulator	NA	NA	NA	NA
1330701:1330717	attR	NA	NA	NA	NA
WP_045796737.1\|1332146_1333592_+	coniferyl aldehyde dehydrogenase	NA	NA	NA	NA
WP_045796738.1\|1333706_1335425_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_087662167.1\|1335743_1336490_-\|transposase	IS5-like element ISAba31 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.3e-14	35.0
WP_075696605.1\|1337790_1340850_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_075696604.1\|1340842_1343032_-	hypothetical protein	NA	NA	NA	NA
WP_075696603.1\|1343021_1343663_-	hypothetical protein	NA	NA	NA	NA
WP_046880033.1\|1344710_1345046_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_104851828.1\|1345042_1345426_-\|transposase	transposase	NA	NA	NA	NA
WP_075696592.1\|1347216_1352601_+	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_010326927.1\|1353350_1354376_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_000693745.1\|1354733_1356689_-	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	2.1e-129	41.1
WP_004994718.1\|1357087_1358113_+\|transposase	IS30-like element ISAba125 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.0e-25	30.4
WP_155757101.1\|1359517_1360736_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.8e-79	53.2
WP_156188918.1\|1361094_1362018_-	DUF4357 domain-containing protein	NA	NA	NA	NA
WP_156188919.1\|1362027_1363224_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	6.4e-28	28.8
WP_156188920.1\|1363223_1364798_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	3.5e-159	56.3
WP_171431988.1\|1364991_1365150_+	hypothetical protein	NA	NA	NA	NA
WP_156188921.1\|1365228_1365786_+	hypothetical protein	NA	NA	NA	NA
WP_156188922.1\|1365766_1366108_+	hypothetical protein	NA	NA	NA	NA
WP_156188923.1\|1366168_1366447_+	hypothetical protein	NA	NA	NA	NA
WP_156188924.1\|1366562_1367174_-	hypothetical protein	NA	NA	NA	NA
WP_156188925.1\|1367401_1367782_+	hypothetical protein	NA	NA	NA	NA
WP_004811110.1\|1367901_1368834_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	40.9
WP_004645384.1\|1369975_1370722_+\|transposase	IS5-like element ISAba31 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.6e-13	35.0
WP_156189675.1\|1371199_1371373_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_051061469.1\|1371380_1372313_+\|transposase	IS5-like element ISAba12 family transposase	Q1MVF0	Enterobacteria_phage	3.5e-58	40.7
WP_104988717.1\|1375230_1375725_-	DNA starvation/stationary phase protection protein	W5S6G8	Pithovirus	6.8e-16	39.3
WP_104988188.1\|1377166_1378186_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-80	45.8
WP_001053379.1\|1378185_1378959_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156188926.1\|1379571_1381689_-	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA
WP_104490639.1\|1381949_1382894_+	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA
WP_005177351.1\|1382930_1383221_+	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA
WP_104988715.1\|1383232_1383988_+	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA
WP_016658268.1\|1384016_1384517_+	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA
WP_104988714.1\|1384556_1385615_+	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA
WP_104988713.1\|1386409_1387201_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA
WP_104988712.1\|1387203_1388757_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_156188927.1\|1388771_1389998_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_005177377.1\|1390041_1391334_+	phenylacetate--CoA ligase	NA	NA	NA	NA
WP_104988710.1\|1391394_1392342_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA
WP_104988709.1\|1392411_1393011_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_156188928.1\|1393119_1394754_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.5e-27	27.8
WP_005177384.1\|1395415_1395625_+	hypothetical protein	NA	NA	NA	NA
WP_016658258.1\|1395667_1396669_-	biotin synthase BioB	NA	NA	NA	NA
WP_016658257.1\|1396812_1397028_-	hypothetical protein	NA	NA	NA	NA
WP_156189676.1\|1397148_1398225_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA

DBSCAN-SWA_8

1483525 : 1597015

100

uncultured_virus(23.53%)

holin,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156188941.1\|1483525_1484881_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_171456176.1\|1484944_1487458_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_104988663.1\|1487500_1487998_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_104988662.1\|1488001_1489072_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_104989373.1\|1489077_1489563_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_016658197.1\|1489559_1490348_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_104988661.1\|1490709_1491960_+	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_104988660.1\|1492204_1493113_+	AEC family transporter	NA	NA	NA	NA
WP_005177627.1\|1493127_1493778_-	hypothetical protein	NA	NA	NA	NA
WP_005177629.1\|1493875_1494364_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_104511175.1\|1494351_1494876_-	hypothetical protein	NA	NA	NA	NA
WP_045795809.1\|1494940_1496032_-	3-deoxy-7-phosphoheptulonate synthase	A0A2I6UFP9	Klebsiella_phage	1.7e-80	49.1
WP_075168185.1\|1496159_1497050_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_104988659.1\|1497682_1498852_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_104988658.1\|1498841_1499780_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_104989372.1\|1499973_1501179_+	alkane 1-monooxygenase	NA	NA	NA	NA
WP_104988657.1\|1501291_1501762_-\|transposase	transposase	NA	NA	NA	NA
WP_171501511.1\|1501709_1502105_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_104988655.1\|1502189_1502678_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_104988654.1\|1502793_1503993_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_104988653.1\|1504019_1505315_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_005177645.1\|1505539_1506913_-	AarF/ABC1/UbiB kinase family protein	M1HE59	Acanthocystis_turfacea_Chlorella_virus	1.2e-09	22.0
WP_104988652.1\|1507078_1507384_-	hypothetical protein	NA	NA	NA	NA
WP_104988651.1\|1507578_1507959_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_045795711.1\|1508127_1509138_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_075167735.1\|1509152_1510244_+	chorismate synthase	A0A291AU41	Pandoravirus	3.6e-78	43.3
WP_156188943.1\|1510706_1511796_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156188944.1\|1511800_1512667_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	4.8e-49	40.0
WP_016658183.1\|1513511_1514129_-	DUF1449 family protein	NA	NA	NA	NA
WP_171065079.1\|1514156_1514465_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_104988648.1\|1514479_1515484_-	adenosine kinase	NA	NA	NA	NA
WP_104988647.1\|1515620_1516070_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_156188945.1\|1516214_1519154_+	insulinase family protein	E3T4Q7	Cafeteria_roenbergensis_virus	6.5e-05	20.6
WP_005177679.1\|1519175_1520321_+	phospholipase A	NA	NA	NA	NA
WP_156188946.1\|1520392_1521757_-	potassium transporter TrkH	NA	NA	NA	NA
WP_104988644.1\|1521768_1522419_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_104988643.1\|1522563_1524102_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_104988642.1\|1524209_1524881_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA
WP_104988641.1\|1524991_1525672_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_171456144.1\|1525855_1526911_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_104989369.1\|1526990_1527737_+	hypothetical protein	NA	NA	NA	NA
WP_104988640.1\|1527755_1528172_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	4.5e-13	44.0
WP_104988639.1\|1528181_1530458_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	2.8e-165	43.8
WP_104988638.1\|1530569_1530923_+	YnfA family protein	A0A218MNG8	uncultured_virus	1.1e-28	59.4
WP_156188739.1\|1533155_1534378_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_045795694.1\|1534484_1535399_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_171431927.1\|1535513_1536164_-	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_104988637.1\|1536390_1537275_+	methylisocitrate lyase	NA	NA	NA	NA
WP_104988636.1\|1537279_1538419_+	2-methylcitrate synthase	NA	NA	NA	NA
WP_104988635.1\|1538496_1539117_-	aminotransferase	NA	NA	NA	NA
WP_075167744.1\|1539191_1539674_-	CinA family protein	A0A218MNG4	uncultured_virus	3.6e-22	38.1
WP_005177745.1\|1539883_1540117_+	hypothetical protein	NA	NA	NA	NA
WP_171456143.1\|1540294_1540438_+	hypothetical protein	NA	NA	NA	NA
WP_104988634.1\|1540555_1540888_+	hypothetical protein	NA	NA	NA	NA
WP_005177751.1\|1541290_1541527_+	hypothetical protein	NA	NA	NA	NA
WP_005177753.1\|1541903_1542251_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_156188948.1\|1542289_1542529_-	DUF2171 domain-containing protein	NA	NA	NA	NA
WP_104988633.1\|1542784_1543339_-	cytochrome b	NA	NA	NA	NA
WP_104988632.1\|1544531_1545692_+	MFS transporter	NA	NA	NA	NA
WP_156188949.1\|1545739_1547227_-	amidase	NA	NA	NA	NA
WP_034597534.1\|1547424_1547916_+	hypothetical protein	NA	NA	NA	NA
WP_005177767.1\|1547980_1549345_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_104988630.1\|1549362_1549785_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_005177772.1\|1549801_1550257_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_156188950.1\|1551496_1553185_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	4.5e-144	54.2
WP_000618091.1\|1553259_1553595_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_019836977.1\|1553591_1553975_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_156188951.1\|1554053_1554200_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004780063.1\|1554196_1554532_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_156188953.1\|1554606_1556295_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	4.5e-144	54.2
WP_104988629.1\|1556523_1556781_+	hypothetical protein	NA	NA	NA	NA
WP_104988628.1\|1556784_1557531_+	zeta toxin	NA	NA	NA	NA
WP_104989368.1\|1558024_1558441_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_104988627.1\|1558442_1558865_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_104988626.1\|1558861_1559737_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_104989367.1\|1559878_1560643_+	alpha/beta fold hydrolase	G1DB77	Mycobacterium_phage	1.8e-07	35.1
WP_104988625.1\|1560656_1561619_-	M15 family metallopeptidase	A0A0H3V0Q8	Geobacillus_virus	2.4e-09	32.1
WP_104988624.1\|1561615_1562260_-	hypothetical protein	NA	NA	NA	NA
WP_104988623.1\|1562274_1563081_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004811110.1\|1563497_1564430_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	40.9
WP_001280601.1\|1568657_1569983_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_156189677.1\|1570244_1572434_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_045795662.1\|1572787_1573588_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_005177877.1\|1573629_1574121_-	flavin reductase	NA	NA	NA	NA
WP_005177880.1\|1574230_1575259_-	methionine synthase	NA	NA	NA	NA
WP_016658148.1\|1575287_1576274_-	DUF1852 domain-containing protein	NA	NA	NA	NA
WP_104988609.1\|1577980_1578247_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	4.0e-15	50.0
WP_067766621.1\|1578209_1578485_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_104988608.1\|1578671_1580534_+	AAA family ATPase	NA	NA	NA	NA
WP_156188954.1\|1580574_1581315_-	thiol:disulfide interchange protein DsbG	NA	NA	NA	NA
WP_156188955.1\|1581327_1582170_-	redoxin domain-containing protein	NA	NA	NA	NA
WP_156188956.1\|1582166_1584149_-	protein-disulfide reductase DsbD	NA	NA	NA	NA
WP_104988604.1\|1584258_1585155_+	response regulator	NA	NA	NA	NA
WP_104988603.1\|1585185_1585959_-	hypothetical protein	NA	NA	NA	NA
WP_104988602.1\|1586115_1587783_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	4.0e-52	30.4
WP_171249306.1\|1587799_1589275_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_104989365.1\|1589292_1589877_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_104988601.1\|1590106_1592143_+\|holin	choline transporter	A0A2I7QNT1	Vibrio_phage	1.6e-18	25.8
WP_045795652.1\|1592155_1592764_+	MarC family protein	NA	NA	NA	NA
WP_000644963.1\|1596337_1597015_-\|transposase	IS1595 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

1713398 : 1762803

uncultured_Caudovirales_phage(31.25%)

transposase,terminase,tRNA,tail,head,integrase

attL 1714573:1714588|attR 1750828:1750843

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156189005.1\|1713398_1715051_-\|terminase	phage terminase large subunit	A0A2H4JCA3	uncultured_Caudovirales_phage	1.2e-149	49.1
1714573:1714588	attL	NA	NA	NA	NA
WP_156189006.1\|1715054_1715402_-	hypothetical protein	NA	NA	NA	NA
WP_156189007.1\|1715467_1718995_-	hypothetical protein	A0A193GZ61	Enterobacter_phage	3.0e-65	31.5
WP_156189008.1\|1719060_1719267_-	hypothetical protein	NA	NA	NA	NA
WP_156189009.1\|1719362_1722191_-	lytic transglycosylase domain-containing protein	A0A222YY44	Escherichia_phage	3.6e-53	37.2
WP_156189679.1\|1722187_1724218_-	methyl-coenzyme M reductase	NA	NA	NA	NA
WP_156189010.1\|1724214_1724613_-	hypothetical protein	NA	NA	NA	NA
WP_156189011.1\|1724615_1725068_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_156189012.1\|1725069_1727106_-	carbohydrate-binding protein	A0A1B1IVP8	uncultured_Mediterranean_phage	3.2e-27	23.0
WP_156189013.1\|1727105_1727669_-	hypothetical protein	A0A0F7LAE8	uncultured_marine_virus	5.3e-17	29.0
WP_156189014.1\|1727727_1727967_-	hypothetical protein	NA	NA	NA	NA
WP_156189015.1\|1728139_1729048_-	hypothetical protein	NA	NA	NA	NA
WP_156189016.1\|1729061_1729706_-	hypothetical protein	NA	NA	NA	NA
WP_156189680.1\|1729698_1730166_-	hypothetical protein	NA	NA	NA	NA
WP_156189017.1\|1730165_1731827_-\|head,tail	phage head-tail adapter protein	A0A2H4J3N6	uncultured_Caudovirales_phage	9.9e-112	40.4
WP_156189018.1\|1731829_1732078_-	hypothetical protein	NA	NA	NA	NA
WP_156189019.1\|1732079_1732313_-	hypothetical protein	NA	NA	NA	NA
WP_156189020.1\|1732315_1732621_-	hypothetical protein	NA	NA	NA	NA
WP_156189021.1\|1733539_1733965_-	hypothetical protein	NA	NA	NA	NA
WP_156189022.1\|1733967_1734480_-	RusA family crossover junction endodeoxyribonuclease	A0A1X9SFE9	Acinetobacter_phage	3.7e-25	49.1
WP_156189023.1\|1734476_1734932_-	hypothetical protein	NA	NA	NA	NA
WP_156189024.1\|1734928_1735153_-	hypothetical protein	NA	NA	NA	NA
WP_156189025.1\|1735149_1735776_-	restriction endonuclease	NA	NA	NA	NA
WP_156189026.1\|1735772_1736675_-	hypothetical protein	NA	NA	NA	NA
WP_156189027.1\|1736725_1737034_-	hypothetical protein	NA	NA	NA	NA
WP_156189028.1\|1737042_1737246_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_156189029.1\|1737363_1738056_+	helix-turn-helix domain-containing protein	A0A0R6PHW3	Moraxella_phage	5.2e-38	36.2
WP_156189030.1\|1738071_1738437_+	hypothetical protein	NA	NA	NA	NA
WP_156189031.1\|1738626_1738917_+	hypothetical protein	NA	NA	NA	NA
WP_104988791.1\|1738913_1739894_+	YqaJ viral recombinase family protein	Q9T173	Listeria_phage	2.6e-51	37.9
WP_104988792.1\|1739901_1740213_+	hypothetical protein	NA	NA	NA	NA
WP_156189032.1\|1740209_1741202_+	recombinase RecT	A0A2H4J1F0	uncultured_Caudovirales_phage	1.5e-54	61.6
WP_156189681.1\|1741274_1741547_+	hypothetical protein	A0A0P0J0F2	Acinetobacter_phage	1.7e-24	60.9
WP_156189033.1\|1741546_1741915_+	hypothetical protein	NA	NA	NA	NA
WP_156189034.1\|1741907_1742222_+	hypothetical protein	NA	NA	NA	NA
WP_156189035.1\|1742221_1742500_+	DNA-binding protein	NA	NA	NA	NA
WP_156189036.1\|1742496_1743516_-\|integrase	tyrosine-type recombinase/integrase	A0A0R6PHH4	Moraxella_phage	2.3e-71	43.1
WP_104471397.1\|1743797_1744166_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.3e-13	38.6
WP_156189037.1\|1744209_1744560_+	hypothetical protein	NA	NA	NA	NA
WP_045794818.1\|1744577_1744862_+	hypothetical protein	NA	NA	NA	NA
WP_005178263.1\|1744880_1745192_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	7.0e-19	46.1
WP_171501541.1\|1745263_1746163_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_156189039.1\|1746610_1747231_+	NUDIX hydrolase N-terminal domain-containing protein	NA	NA	NA	NA
WP_104483800.1\|1747360_1748695_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_156189040.1\|1748959_1749373_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_156189041.1\|1749374_1750067_+	LrgB family protein	NA	NA	NA	NA
WP_104988545.1\|1750100_1750571_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_156189042.1\|1750646_1752272_-	Na/Pi symporter	NA	NA	NA	NA
1750828:1750843	attR	NA	NA	NA	NA
WP_005178276.1\|1752584_1753127_+	transglycosylase SLT domain-containing protein	A0A0H4TGB4	Bacillus_phage	2.8e-07	33.6
WP_156188739.1\|1753198_1754421_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_016658048.1\|1754612_1755161_+	type 1 glutamine amidotransferase	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	5.6e-11	30.3
WP_156189043.1\|1755228_1755552_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_076754343.1\|1761840_1762803_+\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_10

1889533 : 1946929

Acinetobacter_phage(36.84%)

transposase,integrase,capsid,terminase

attL 1880128:1880144|attR 1954736:1954752

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1880128:1880144	attL	NA	NA	NA	NA
WP_000644963.1\|1889533_1890211_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_156189096.1\|1890577_1890853_-	hypothetical protein	NA	NA	NA	NA
WP_171501513.1\|1890845_1891835_-	NERD domain-containing protein	NA	NA	NA	NA
WP_104988188.1\|1891935_1892955_+\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-80	45.8
WP_001053379.1\|1892954_1893728_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_156189100.1\|1893982_1894954_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_156189102.1\|1894908_1895253_-	hypothetical protein	NA	NA	NA	NA
WP_156188819.1\|1895344_1896991_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.2e-145	53.6
WP_000618091.1\|1897065_1897401_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_019383553.1\|1897397_1897781_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_156189104.1\|1897863_1898511_-	hypothetical protein	NA	NA	NA	NA
WP_156189683.1\|1898574_1901214_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA
WP_005178664.1\|1901509_1901779_-	hypothetical protein	NA	NA	NA	NA
WP_016659081.1\|1902050_1902410_-	hypothetical protein	NA	NA	NA	NA
WP_156189106.1\|1902813_1903389_-	glycoside hydrolase family protein	D6QWN8	uncultured_phage	1.6e-61	66.3
WP_156189108.1\|1903388_1903607_-	hypothetical protein	NA	NA	NA	NA
WP_156189110.1\|1903603_1904161_-	hypothetical protein	NA	NA	NA	NA
WP_045796833.1\|1904220_1904451_-	hypothetical protein	NA	NA	NA	NA
WP_156189112.1\|1904443_1906522_-	hypothetical protein	NA	NA	NA	NA
WP_156189114.1\|1906539_1906926_-	hypothetical protein	NA	NA	NA	NA
WP_156189116.1\|1906922_1907219_-	hypothetical protein	NA	NA	NA	NA
WP_156189117.1\|1907215_1908499_-	hypothetical protein	NA	NA	NA	NA
WP_156189119.1\|1908551_1910168_-	hypothetical protein	A0A0M4U447	Ralstonia_phage	2.9e-116	41.0
WP_156189121.1\|1910181_1912149_-	hypothetical protein	A0A0M4U447	Ralstonia_phage	7.7e-95	35.1
WP_104988761.1\|1912148_1912550_-	hypothetical protein	NA	NA	NA	NA
WP_156189123.1\|1912549_1915909_-	tape measure protein	A0A125RN77	Pseudomonas_phage	1.6e-31	34.7
WP_156189125.1\|1915951_1916542_-	hypothetical protein	NA	NA	NA	NA
WP_156189126.1\|1916538_1916925_-	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	4.2e-13	53.6
WP_156189128.1\|1916978_1917548_-	hypothetical protein	NA	NA	NA	NA
WP_156189130.1\|1917622_1918153_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	1.7e-25	36.6
WP_156189132.1\|1918419_1919181_-	hypothetical protein	NA	NA	NA	NA
WP_171260907.1\|1919180_1919351_-	hypothetical protein	NA	NA	NA	NA
WP_156189134.1\|1919360_1919792_-	hypothetical protein	NA	NA	NA	NA
WP_156189135.1\|1919794_1920205_-	DUF1320 family protein	A0A2D1GNP0	Pseudomonas_phage	3.2e-11	36.5
WP_156189137.1\|1920206_1920692_-	hypothetical protein	M4SN98	Psychrobacter_phage	1.2e-20	36.9
WP_156189139.1\|1920703_1921039_-	hypothetical protein	NA	NA	NA	NA
WP_156189140.1\|1921052_1922009_-	DUF2184 domain-containing protein	M4SQD1	Psychrobacter_phage	1.3e-50	38.2
WP_156189142.1\|1922012_1922483_-	hypothetical protein	NA	NA	NA	NA
WP_156189143.1\|1922498_1923671_-	DUF2213 domain-containing protein	M4SN93	Psychrobacter_phage	4.0e-67	42.4
WP_156189144.1\|1923913_1924135_-	hypothetical protein	NA	NA	NA	NA
WP_156189145.1\|1924195_1925059_-\|capsid	minor capsid protein	M4T3R2	Psychrobacter_phage	1.5e-47	42.9
WP_156189146.1\|1925039_1926338_-	DUF1073 domain-containing protein	M4SN90	Psychrobacter_phage	1.3e-74	37.1
WP_156189147.1\|1926348_1927875_-\|terminase	phage terminase large subunit	A0A2P0WA10	Enterobacter_phage	3.6e-92	41.9
WP_156189148.1\|1927852_1928329_-	DUF2280 domain-containing protein	A0A0D4DC15	Acinetobacter_phage	9.9e-49	63.3
WP_156189149.1\|1928376_1928994_-\|transposase	transposase	A0A1B1P9K3	Acinetobacter_phage	2.0e-57	57.6
WP_156189150.1\|1930087_1930642_-	hypothetical protein	A0A1B1P9I8	Acinetobacter_phage	1.5e-59	61.2
WP_156189684.1\|1930649_1931051_-	DUF559 domain-containing protein	A0A0P0I8E8	Acinetobacter_phage	1.0e-38	63.2
WP_156189151.1\|1931043_1931385_-	hypothetical protein	A0A2H4JE05	uncultured_Caudovirales_phage	2.5e-09	46.7
WP_156189152.1\|1931794_1932235_-	hypothetical protein	A0A2H4J558	uncultured_Caudovirales_phage	2.7e-08	34.5
WP_156189153.1\|1932231_1932813_-	hypothetical protein	NA	NA	NA	NA
WP_156189154.1\|1932809_1933286_-	hypothetical protein	NA	NA	NA	NA
WP_156189155.1\|1933282_1934032_-	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	7.4e-83	61.0
WP_156189685.1\|1934028_1934865_-	replication protein	A0A0D4DBT2	Acinetobacter_phage	1.1e-23	48.2
WP_075174452.1\|1934995_1935454_-	phage regulatory CII family protein	A0A2H4J3D5	uncultured_Caudovirales_phage	4.6e-59	72.2
WP_156189156.1\|1935504_1935735_-	helix-turn-helix domain-containing protein	A0A0P0IY81	Acinetobacter_phage	5.3e-16	57.7
WP_156189686.1\|1935892_1936555_+	LexA family transcriptional repressor	A0A1I9KG86	Aeromonas_phage	2.1e-28	37.6
WP_156189157.1\|1936733_1937906_+	type I restriction enzyme HsdR N-terminal domain-containing protein	A0A1S5SAB0	Streptococcus_phage	1.7e-36	30.2
WP_156189158.1\|1937956_1938460_+	hypothetical protein	A0A127KNL4	Pseudomonas_phage	5.1e-19	35.9
WP_156189159.1\|1938667_1938868_+	hypothetical protein	NA	NA	NA	NA
WP_156189160.1\|1938833_1938998_-	hypothetical protein	NA	NA	NA	NA
WP_156189161.1\|1939202_1939634_+	hypothetical protein	A0A0N7IRF7	Acinetobacter_phage	1.7e-26	46.6
WP_075175333.1\|1939633_1939933_+	hypothetical protein	NA	NA	NA	NA
WP_156189162.1\|1939944_1941066_+	AAA family ATPase	A0A0N7IRE0	Acinetobacter_phage	1.1e-175	81.8
WP_156189163.1\|1941062_1941749_+	DUF3820 family protein	A0A059VJT9	Pseudomonas_phage	2.5e-32	40.6
WP_156189164.1\|1941745_1941982_+	response regulator	NA	NA	NA	NA
WP_156189165.1\|1941981_1942254_+	hypothetical protein	A0A0P0J0F2	Acinetobacter_phage	4.8e-24	61.2
WP_155757101.1\|1942851_1944071_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.8e-79	53.2
WP_171501543.1\|1944088_1944349_+	hypothetical protein	NA	NA	NA	NA
WP_156189166.1\|1944341_1944704_+	hypothetical protein	A0A2H4JCC6	uncultured_Caudovirales_phage	5.8e-57	91.7
WP_156189167.1\|1944700_1945471_+	hypothetical protein	A0A220NQM3	Acinetobacter_phage	2.7e-43	48.9
WP_045794963.1\|1945481_1945727_+	helix-turn-helix domain-containing protein	A0A0N7IRE8	Acinetobacter_phage	5.1e-17	51.9
WP_156189168.1\|1945723_1946929_-\|integrase	tyrosine-type recombinase/integrase	A0A0P0IKP2	Acinetobacter_phage	5.7e-117	50.5
1954736:1954752	attR	NA	NA	NA	NA

DBSCAN-SWA_11

2019052 : 2029619

Catovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156189187.1\|2019052_2021686_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.1e-32	23.6
WP_005178805.1\|2021891_2022215_+	ferredoxin family protein	NA	NA	NA	NA
WP_005178806.1\|2022345_2023068_+	hypothetical protein	NA	NA	NA	NA
WP_005178807.1\|2023200_2023866_+	O-methyltransferase	S5YRC3	Mycobacterium_phage	5.0e-30	38.7
WP_005178808.1\|2024008_2024851_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	1.3e-35	33.9
WP_171065107.1\|2024987_2025584_-	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	1.3e-08	49.2
WP_156189188.1\|2025597_2026197_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.2e-21	39.1
WP_005178811.1\|2026299_2027484_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_156189189.1\|2027480_2029619_-	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	8.2e-26	23.7

DBSCAN-SWA_12

2131199 : 2140054

uncultured_Caudovirales_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_104470299.1\|2131199_2131904_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	8.2e-92	70.5
WP_005179062.1\|2131903_2132953_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_156189233.1\|2132956_2133430_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	1.1e-36	53.2
WP_005179068.1\|2133434_2133752_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	7.9e-26	64.4
WP_156189234.1\|2133836_2134265_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	2.6e-40	59.9
WP_156189235.1\|2134409_2135801_+\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	9.5e-132	65.2
WP_005179080.1\|2135804_2136059_+	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	2.0e-16	46.6
WP_045794893.1\|2136196_2137762_-	alkyl hydroperoxide reductase subunit F	A0A1W6JK46	Lactococcus_phage	6.7e-25	30.5
WP_171501517.1\|2137962_2138916_-	hypothetical protein	NA	NA	NA	NA
WP_156189237.1\|2138920_2140054_-	toxic anion resistance protein	K4F9M7	Cronobacter_phage	2.8e-17	22.8

DBSCAN-SWA_13

2592372 : 2662216

uncultured_Mediterranean_phage(11.76%)

tRNA,integrase,transposase

attL 2629073:2629132|attR 2671684:2672863

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156189422.1\|2592372_2593410_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_004974951.1\|2593435_2594464_+	hypothetical protein	NA	NA	NA	NA
WP_156189424.1\|2594486_2595053_+	LemA family protein	A0A1X9IGG1	Lactococcus_phage	9.5e-06	27.1
WP_156189426.1\|2595114_2596065_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-16	38.2
WP_075167471.1\|2596428_2597559_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	8.3e-94	48.5
WP_005180065.1\|2597661_2597991_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_016658621.1\|2598044_2599946_+	protein translocase subunit SecD	NA	NA	NA	NA
WP_171501526.1\|2599954_2600926_+	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	6.4e-34	33.1
WP_156189430.1\|2600974_2601640_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_045796610.1\|2601694_2604001_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA
WP_156189431.1\|2604032_2605424_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	2.0e-28	26.1
WP_156189433.1\|2605430_2606252_-	ribonuclease H-like domain-containing protein	NA	NA	NA	NA
WP_171501527.1\|2606278_2607217_-	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	5.7e-56	42.3
WP_156189437.1\|2607362_2610173_+	response regulator	A0A1V0SGX0	Hokovirus	3.7e-50	29.4
WP_156189438.1\|2610281_2611070_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA
WP_156189440.1\|2611100_2611973_+	NAD-binding protein	A0A077SLF7	Escherichia_phage	6.6e-14	25.2
WP_156189442.1\|2612009_2612798_+	TIM barrel protein	NA	NA	NA	NA
WP_171065092.1\|2612928_2613282_+	ribosome silencing factor	NA	NA	NA	NA
WP_156189444.1\|2613513_2614818_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_045796602.1\|2614931_2616377_-	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	NA	NA	NA	NA
WP_005180100.1\|2616380_2616704_-	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_045796601.1\|2616715_2617843_-	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_156189446.1\|2618689_2619616_+	EamA family transporter	NA	NA	NA	NA
WP_104988206.1\|2619764_2620952_+	MFS transporter	NA	NA	NA	NA
WP_156189448.1\|2620977_2621619_-	hypothetical protein	NA	NA	NA	NA
WP_156189450.1\|2622066_2622429_+	hypothetical protein	NA	NA	NA	NA
WP_016658607.1\|2622483_2622768_+	hypothetical protein	NA	NA	NA	NA
WP_156189452.1\|2622898_2623366_-	CinA family protein	A0A218MNG4	uncultured_virus	6.3e-40	51.3
WP_156189454.1\|2623602_2625018_+	hypothetical protein	NA	NA	NA	NA
WP_156189456.1\|2625036_2627163_+	catalase HPII	A0A2K9L572	Tupanvirus	3.6e-138	46.1
WP_005176703.1\|2627231_2628383_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156189458.1\|2628560_2628992_-	hypothetical protein	NA	NA	NA	NA
2629073:2629132	attL	NA	NA	NA	NA
WP_156188943.1\|2629090_2630181_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156189460.1\|2630702_2633306_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_156189462.1\|2633425_2636530_-	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	1.2e-73	30.3
WP_156189464.1\|2636533_2637205_-	DUF4276 family protein	NA	NA	NA	NA
WP_156189466.1\|2637206_2638283_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	1.3e-11	23.7
WP_156189468.1\|2638285_2639689_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_156189470.1\|2639685_2641101_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_019838330.1\|2641090_2642821_-	type I restriction-modification system subunit M	NA	NA	NA	NA
WP_156189472.1\|2643063_2643960_-	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_156189473.1\|2644098_2645172_-	YqaJ viral recombinase family protein	A0A139ZPJ9	Marinitoga_camini_virus	1.8e-45	36.3
WP_156189475.1\|2645316_2646354_-	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	6.5e-61	38.9
WP_156189477.1\|2646411_2646711_-	hypothetical protein	NA	NA	NA	NA
WP_156189479.1\|2646822_2647203_-	hypothetical protein	NA	NA	NA	NA
WP_156189481.1\|2647214_2647796_-	hypothetical protein	NA	NA	NA	NA
WP_002058491.1\|2647813_2648074_-	hypothetical protein	NA	NA	NA	NA
WP_156189483.1\|2648674_2649637_-	hypothetical protein	NA	NA	NA	NA
WP_004644609.1\|2649679_2650681_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_156189484.1\|2651136_2652927_-	hypothetical protein	NA	NA	NA	NA
WP_010326927.1\|2653418_2654444_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_042892155.1\|2655263_2656145_-	hypothetical protein	NA	NA	NA	NA
WP_004644614.1\|2656330_2656603_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_042892157.1\|2656586_2657735_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8L8	uncultured_Caudovirales_phage	3.1e-96	47.7
WP_171501548.1\|2657886_2658891_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_000210517.1\|2659821_2660205_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618086.1\|2660201_2660537_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001094419.1\|2660611_2662216_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	2.7e-146	54.4
2671684:2672863	attR	NA	NA	NA	NA

DBSCAN-SWA_14

2670634 : 2723373

uncultured_virus(14.29%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156188943.1\|2670634_2671724_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156189697.1\|2671726_2671846_+	DUF475 domain-containing protein	NA	NA	NA	NA
WP_104988193.1\|2671886_2672411_+	TIGR00645 family protein	K4K6D8	Caulobacter_phage	4.2e-16	29.4
WP_156188819.1\|2673223_2674870_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.2e-145	53.6
WP_000618091.1\|2674944_2675280_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_019383553.1\|2675276_2675660_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_104987963.1\|2676645_2677854_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.2e-51	51.3
WP_156189490.1\|2677926_2678715_-	tryptophan synthase subunit alpha	NA	NA	NA	NA
WP_156189491.1\|2678711_2679923_-	tryptophan synthase subunit beta	NA	NA	NA	NA
WP_156189492.1\|2680023_2680917_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_156189493.1\|2681030_2681603_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_076755112.1\|2681578_2682076_+	chalcone isomerase family protein	NA	NA	NA	NA
WP_045795869.1\|2682086_2682773_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.5e-29	37.3
WP_156189494.1\|2682790_2684113_-	sensor histidine kinase	NA	NA	NA	NA
WP_156189495.1\|2684152_2685202_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_156189496.1\|2685210_2685990_-	DUF1295 domain-containing protein	NA	NA	NA	NA
WP_156189497.1\|2686014_2687217_-	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	8.4e-44	32.5
WP_156189498.1\|2687213_2688002_-	DUF1365 family protein	NA	NA	NA	NA
WP_156189499.1\|2688001_2689294_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_156189500.1\|2689290_2690277_-	fatty acid desaturase	F2NZ38	Diadromus_pulchellus_ascovirus	1.1e-22	27.9
WP_156189501.1\|2690396_2691017_-\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_156189698.1\|2691150_2691699_-	lipocalin family protein	A0A2P1EMA7	Moumouvirus	2.1e-18	39.0
WP_171501528.1\|2691798_2692572_-	NAD(+) diphosphatase	NA	NA	NA	NA
WP_156189502.1\|2692953_2694477_+	cryptochrome/photolyase family protein	E3T4R9	Cafeteria_roenbergensis_virus	4.9e-49	28.2
WP_104988163.1\|2694480_2694633_+	DUF2256 domain-containing protein	NA	NA	NA	NA
WP_104989346.1\|2694629_2694884_-	TIGR03643 family protein	NA	NA	NA	NA
WP_156189503.1\|2696404_2697634_+	TonB-dependent receptor	NA	NA	NA	NA
WP_156189504.1\|2697737_2699822_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	8.9e-17	33.3
WP_156189505.1\|2700100_2702293_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	3.6e-186	50.1
WP_156189506.1\|2702488_2703511_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	4.4e-09	38.5
WP_087662421.1\|2703608_2704463_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_156189507.1\|2704536_2705859_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_075167437.1\|2706166_2707432_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.1e-98	48.6
WP_005180148.1\|2707547_2707952_+	hypothetical protein	NA	NA	NA	NA
WP_005180151.1\|2708266_2709487_+	acetate kinase	NA	NA	NA	NA
WP_104490301.1\|2709537_2711676_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_156189508.1\|2711749_2712439_-	hypothetical protein	NA	NA	NA	NA
WP_045795847.1\|2712537_2712891_+	hypothetical protein	NA	NA	NA	NA
WP_171501549.1\|2712887_2714000_+	hypothetical protein	NA	NA	NA	NA
WP_171249309.1\|2713983_2714889_+	hypothetical protein	NA	NA	NA	NA
WP_005180157.1\|2715470_2716997_+	fumarate hydratase	NA	NA	NA	NA
WP_005180158.1\|2717069_2717783_-	DUF2846 domain-containing protein	NA	NA	NA	NA
WP_045796657.1\|2717952_2719263_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.7e-130	54.9
WP_156189509.1\|2719290_2719896_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	2.6e-62	60.5
WP_156189510.1\|2720087_2721419_-	trigger factor	NA	NA	NA	NA
WP_156188747.1\|2722344_2723373_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_15

2926346 : 3053269

111

Escherichia_phage(20.0%)

tRNA,integrase,transposase

attL 2945235:2945256|attR 3059412:3060451

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_045795247.1\|2926346_2927855_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_005180548.1\|2928242_2928584_+	hypothetical protein	NA	NA	NA	NA
WP_005180550.1\|2928840_2930502_-	energy-dependent translational throttle protein EttA	A0A1B0RXA0	Streptococcus_phage	7.0e-41	27.5
WP_104988073.1\|2930818_2931586_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	1.7e-05	30.7
WP_156189070.1\|2931670_2932900_+\|transposase	transposase	NA	NA	NA	NA
WP_045795245.1\|2933785_2934673_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_045795244.1\|2934754_2935066_+	hypothetical protein	NA	NA	NA	NA
WP_104988071.1\|2935100_2937080_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_045795242.1\|2937166_2939518_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA
WP_045795241.1\|2939853_2940618_+	two-component system response regulator OmpR	W8CYM9	Bacillus_phage	2.2e-29	35.7
WP_045795240.1\|2940958_2942419_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.9e-14	26.8
WP_104988070.1\|2942626_2944144_+	acetyl-CoA hydrolase/transferase family protein	NA	NA	NA	NA
WP_104988069.1\|2944226_2944736_-	hypothetical protein	NA	NA	NA	NA
2945235:2945256	attL	NA	NA	NA	NA
WP_016658426.1\|2945459_2945837_-	acetyl-CoA sensor PanZ family protein	NA	NA	NA	NA
2945235:2945256	attL	NA	NA	NA	NA
WP_005180581.1\|2945933_2946527_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_104988068.1\|2946526_2947144_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_016658424.1\|2947295_2947784_+	DUF805 domain-containing protein	NA	NA	NA	NA
WP_104472619.1\|2947859_2948528_+	3'-5' exonuclease domain-containing protein 2	NA	NA	NA	NA
WP_075167328.1\|2948705_2949437_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_045795234.1\|2949524_2950460_+	DMT family transporter	NA	NA	NA	NA
WP_156189590.1\|2950493_2950886_-	hypothetical protein	NA	NA	NA	NA
WP_156189591.1\|2950918_2951545_-	DUF1294 domain-containing protein	NA	NA	NA	NA
WP_045795231.1\|2951562_2952513_-	homoserine kinase	NA	NA	NA	NA
WP_045795230.1\|2952626_2953385_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_104988067.1\|2953808_2954441_-	hypothetical protein	NA	NA	NA	NA
WP_005180609.1\|2954551_2955568_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_045795228.1\|2956416_2956662_-	hypothetical protein	NA	NA	NA	NA
WP_104483901.1\|2956731_2957814_-	DNA/RNA non-specific endonuclease	H6X497	Enterobacteria_phage	1.2e-25	38.0
WP_156189592.1\|2958078_2958723_+	hypothetical protein	NA	NA	NA	NA
WP_045795225.1\|2958811_2960692_-	potassium transporter Kup	A7J6G4	Paramecium_bursaria_Chlorella_virus	8.4e-75	31.3
WP_004964802.1\|2961085_2962282_+\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	5.7e-77	41.2
WP_156189593.1\|2962715_2963081_+	hypothetical protein	NA	NA	NA	NA
WP_151958350.1\|2963077_2963449_+	protein ActB	NA	NA	NA	NA
WP_004683789.1\|2963445_2964681_+	MFS transporter	NA	NA	NA	NA
WP_156189594.1\|2964690_2966928_+	TonB-dependent receptor	NA	NA	NA	NA
WP_005180623.1\|2966980_2968207_+	putative acinetoferrin export transporter ActD	NA	NA	NA	NA
WP_156189595.1\|2968317_2969250_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.1e-59	41.9
WP_156189596.1\|2969349_2972598_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_156189597.1\|2972594_2973644_-	DUF1016 family protein	A0A0U2BZN7	Salmonella_phage	9.3e-23	40.4
WP_156189598.1\|2973640_2975029_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_156189599.1\|2975028_2977314_-	N-6 DNA methylase	A0A220A2U5	Liberibacter_phage	3.4e-30	25.3
WP_005180632.1\|2977579_2977810_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_155757101.1\|2978676_2979895_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	4.8e-79	53.2
WP_004780063.1\|2980823_2981159_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_019836977.1\|2981155_2981539_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_156189601.1\|2982096_2983644_-	hypothetical protein	NA	NA	NA	NA
WP_005180651.1\|2985027_2985255_+	hypothetical protein	NA	NA	NA	NA
WP_156189602.1\|2985615_2986440_-	methyltransferase domain-containing protein	NA	NA	NA	NA
2985485:2985506	attR	NA	NA	NA	NA
WP_034598019.1\|2986443_2987742_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
2985485:2985506	attR	NA	NA	NA	NA
WP_156189603.1\|2988175_2989051_-	pirin family protein	NA	NA	NA	NA
WP_005180661.1\|2989252_2989816_-	alkyl hydroperoxide reductase subunit C	NA	NA	NA	NA
WP_104988061.1\|2991091_2992024_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	3.8e-60	40.9
WP_004641881.1\|2992287_2992617_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_016658839.1\|2992766_2993807_-\|transposase	IS481 family transposase	A0A077SLK2	Escherichia_phage	2.3e-175	83.5
WP_000221358.1\|2993949_2994243_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_104988060.1\|2994232_2994478_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_001280601.1\|2994587_2995913_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004668309.1\|2996144_2997089_-	copper resistance protein B	NA	NA	NA	NA
WP_104988059.1\|2997075_2997414_-	hypothetical protein	NA	NA	NA	NA
WP_104988058.1\|2997400_2999266_-	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_104988057.1\|3000150_3000402_-	DUF4041 domain-containing protein	NA	NA	NA	NA
WP_156189604.1\|3000591_3000924_-	restriction endonuclease	NA	NA	NA	NA
WP_156188713.1\|3000933_3002538_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	6.6e-145	53.8
WP_160243458.1\|3002612_3002948_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_156189606.1\|3002944_3003328_-\|transposase	transposase	NA	NA	NA	NA
WP_156189607.1\|3003399_3003987_-	DUF3644 domain-containing protein	NA	NA	NA	NA
WP_001055589.1\|3004065_3004449_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|3004445_3004781_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001094417.1\|3004855_3006502_+\|transposase	IS66-like element ISAba16 family transposase	A0A218MNE7	uncultured_virus	1.5e-144	54.4
WP_004729405.1\|3006676_3007702_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.9e-26	30.7
WP_156189608.1\|3007729_3008110_-	hypothetical protein	NA	NA	NA	NA
WP_051061469.1\|3008094_3009027_+\|transposase	IS5-like element ISAba12 family transposase	Q1MVF0	Enterobacteria_phage	3.5e-58	40.7
WP_104988051.1\|3009848_3010442_-	recombinase family protein	M9Q1K0	Clostridium_phage	2.7e-27	41.5
WP_156189609.1\|3010625_3011525_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_156189610.1\|3011611_3014752_-	CusA/CzcA family heavy metal efflux RND transporter	NA	NA	NA	NA
WP_156189611.1\|3014741_3015971_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_156189612.1\|3015972_3017298_-	TolC family protein	NA	NA	NA	NA
WP_156189613.1\|3017346_3017715_-	cation transporter	NA	NA	NA	NA
WP_156189614.1\|3018047_3019122_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.6e-44	39.2
WP_001140620.1\|3019351_3019654_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000550240.1\|3019950_3020343_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_005237495.1\|3020432_3021713_+	cation transporter	NA	NA	NA	NA
WP_104988045.1\|3021776_3022481_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	2.1e-119	85.3
WP_004281879.1\|3022652_3022847_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_104988044.1\|3023316_3024198_-	CopD family protein	NA	NA	NA	NA
WP_004681441.1\|3024262_3024643_-	copper resistance protein CopC	NA	NA	NA	NA
WP_005105848.1\|3025007_3025439_+	hypothetical protein	NA	NA	NA	NA
WP_004695740.1\|3025465_3025714_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_005105849.1\|3025734_3026169_+	hypothetical protein	NA	NA	NA	NA
WP_104988043.1\|3026172_3026385_+	isoprenylcysteine carboxyl methyltransferase	NA	NA	NA	NA
WP_005105854.1\|3026396_3028772_+	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.6e-94	36.5
WP_156189615.1\|3028768_3030052_+	DUF4010 domain-containing protein	NA	NA	NA	NA
WP_004763973.1\|3030090_3031491_-	heavy metal sensor histidine kinase	NA	NA	NA	NA
WP_004679347.1\|3031483_3032164_-	heavy metal response regulator transcription factor	NA	NA	NA	NA
WP_005006338.1\|3032312_3032609_+	hypothetical protein	NA	NA	NA	NA
WP_156189616.1\|3032698_3034555_+	copper resistance system multicopper oxidase	NA	NA	NA	NA
WP_104988042.1\|3034541_3035462_+	copper resistance protein B	NA	NA	NA	NA
WP_005180724.1\|3035485_3035707_+	hypothetical protein	NA	NA	NA	NA
WP_019385588.1\|3036949_3037165_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_156189617.1\|3037213_3037750_+	hypothetical protein	NA	NA	NA	NA
WP_156188713.1\|3038005_3039610_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	6.6e-145	53.8
WP_160243458.1\|3039684_3040020_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_156188711.1\|3040016_3040400_-\|transposase	transposase	NA	NA	NA	NA
WP_104988039.1\|3041373_3041793_-	hypothetical protein	NA	NA	NA	NA
WP_001053379.1\|3042254_3043028_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.1e-76	57.0
WP_104988188.1\|3043027_3044047_-\|transposase	IS21-like element ISAba8 family transposase	A0A2L1IVA1	Escherichia_phage	6.2e-80	45.8
WP_156189618.1\|3045869_3047426_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_156189619.1\|3048066_3048888_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_045795510.1\|3049688_3050255_-	single-stranded DNA-binding protein	M4SRQ0	Psychrobacter_phage	1.8e-36	65.0
WP_104470282.1\|3050306_3051671_-	MFS transporter	NA	NA	NA	NA
WP_104989389.1\|3052108_3053269_+\|transposase	IS4 family transposase	NA	NA	NA	NA
3059412:3060451	attR	NA	NA	NA	NA

DBSCAN-SWA_16

3203211 : 3247066

Helicobacter_phage(16.67%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016658675.1\|3203211_3203826_+\|transposase	IS607 family transposase	A0A1S5RGS9	Helicobacter_phage	1.3e-61	62.3
WP_016659040.1\|3203822_3204980_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A7P9	Microcystis_virus	2.7e-55	36.9
WP_005181018.1\|3205443_3206097_+	TetR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_168405108.1\|3206140_3206710_-	5'-nucleosidase	NA	NA	NA	NA
WP_156189656.1\|3207005_3208010_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
WP_104500095.1\|3208071_3210918_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	3.2e-78	26.5
WP_045796085.1\|3210910_3211450_+	signal peptidase II	NA	NA	NA	NA
WP_005181033.1\|3211442_3211925_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_005181039.1\|3212062_3212605_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_156189657.1\|3213109_3214276_-	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA
WP_156189658.1\|3214646_3215996_-	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA
WP_016659793.1\|3222197_3222770_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_016659792.1\|3222867_3223563_+	acetoacetate decarboxylase family protein	NA	NA	NA	NA
WP_005181046.1\|3223587_3224664_-	alpha/beta hydrolase	M1PGN2	Moumouvirus	4.0e-29	32.2
WP_016659791.1\|3224866_3225292_+	hypothetical protein	NA	NA	NA	NA
WP_155757651.1\|3225626_3225785_-	hypothetical protein	NA	NA	NA	NA
WP_171294843.1\|3225846_3226296_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.1e-32	50.0
WP_156189659.1\|3226367_3227759_+\|transposase	transposase	A0A2I7RKG5	Vibrio_phage	4.5e-09	23.1
WP_005181051.1\|3228612_3229161_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_156189660.1\|3229280_3231221_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.1e-146	49.5
WP_045795938.1\|3231448_3232360_+\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_162182855.1\|3232480_3232870_+	hypothetical protein	NA	NA	NA	NA
WP_171456190.1\|3232912_3234094_-	lytic murein transglycosylase	NA	NA	NA	NA
WP_045795940.1\|3234628_3234871_-	hypothetical protein	NA	NA	NA	NA
WP_104989320.1\|3234885_3236007_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_104989321.1\|3236022_3236535_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-19	40.3
WP_104989322.1\|3236822_3238103_+	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_171249314.1\|3238105_3238456_-	DMT family protein	NA	NA	NA	NA
WP_005181071.1\|3238698_3240066_+	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA
WP_104511528.1\|3240315_3241401_+	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	4.5e-12	23.8
WP_016659776.1\|3241496_3241778_-	N-acetyltransferase	NA	NA	NA	NA
WP_171501551.1\|3241816_3242158_-	N-acetyltransferase	NA	NA	NA	NA
WP_045795946.1\|3242566_3243523_+	TerC family protein	I7HPH5	Enterobacteria_phage	3.9e-36	36.0
WP_045795947.1\|3243786_3245103_+	guanine deaminase	NA	NA	NA	NA
WP_169712103.1\|3245089_3245245_+	hypothetical protein	NA	NA	NA	NA
WP_045795948.1\|3245315_3245843_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	4.7e-15	33.1
WP_156189662.1\|3245998_3247066_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	I4AZM3	Saccharomonospora_phage	9.8e-28	35.9

Anti-CRISPR protein detection

Acr_ID: NZ_CP046392.1|WP_171501543.1|1944088_1944349_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP046392.1|WP_156189166.1|1944341_1944704_+|hypothetical-protein

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Acr_ID: NZ_CP046392.1|WP_156189167.1|1944700_1945471_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP046392.1|WP_171501543.1|1944088_1944349_+|hypothetical-protein

1944088_1944349_+

86 aa aa

1889533-1946929

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP046392_1	Orphan	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	1939505-1939474	2

1. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046392 position: 1939505-1939474, mismatch: 2

cagctgctgaacttcaaccgcagtaaattccg	CRISPR spacer
caactgctgaacttcaacagcagtaaattccg	Protospacer
**.*************** *************

NZ_CP046392.1|WP_156189166.1|1944341_1944704_+|hypothetical-protein

1944341_1944704_+

120 aa aa

1889533-1946929

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP046392_1	Orphan	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	1939505-1939474	2

1. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046392 position: 1939505-1939474, mismatch: 2

cagctgctgaacttcaaccgcagtaaattccg	CRISPR spacer
caactgctgaacttcaacagcagtaaattccg	Protospacer
**.*************** *************

NZ_CP046392.1|WP_156189167.1|1944700_1945471_+|hypothetical-protein

1944700_1945471_+

256 aa aa

1889533-1946929

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP046392_1	Orphan	1.31\|1374102\|32\|NZ_CP046392\|CRISPRCasFinder,CRT,PILER-CR	1374102-1374133	32	1939505-1939474	2

1. spacer 1.31|1374102|32|NZ_CP046392|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046392 position: 1939505-1939474, mismatch: 2

cagctgctgaacttcaaccgcagtaaattccg	CRISPR spacer
caactgctgaacttcaacagcagtaaattccg	Protospacer
**.*************** *************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046392

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information