CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046445	Leclercia sp. 119287 chromosome, complete genome	4 crisprs	cas3,WYL,csa3,DEDDh,DinG	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046445_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046445_1

1703213-1703335

Orphan

Consensus_repeat	Method
TAGGCCGGGTAAGGCGAAGCCCGCCACCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046445_1

>merge|NZ_CP046445|1|1703213-1703335|CRISPRCasFinder
TAGGCCGGGTAAGGCGAAGCCCGCCACCCGGCAATGCTGTGCGGCCTGATGCCCGGTGACGCTACGCTTACCGGGCCTACGGTTATGTTTTAGGCCGGGTAAGGCGAAGCCGCCACCCGGCAT

>NZ_CP046445|1|1|1703213-1703335|CRISPRCasFinder
TAGGCCGGGTAAGGCGAAGCCCGCCACCCGGCA	ATGCTGTGCGGCCTGATGCCCGGTGACGCTACGCTTACCGGGCCTACGGTTATGTTT
TAGGCCGGGTAAGGCGAAGCCGCCACCCGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046445.1\|WP_142488937.1\|1696641_1697880_+\|hydantoinase/carbamoylase-family-amidase	unknown	unknown	gnl\|CDD\|237250
NZ_CP046445.1\|WP_156263347.1\|1691754_1693155_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176
NZ_CP046445.1\|WP_156263350.1\|1699110_1700313_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP046445.1\|WP_156263352.1\|1706044_1707007_-\|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236929
NZ_CP046445.1\|WP_156263353.1\|1707041_1707575_-\|NADPH-dependent-FMN-reductase	unknown	unknown	gnl\|CDD\|182557
NZ_CP046445.1\|WP_142488949.1\|1712865_1714773_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236861
NZ_CP046445.1\|WP_142488948.1\|1710744_1712853_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	unknown	unknown	gnl\|CDD\|236981
NZ_CP046445.1\|WP_156263351.1\|1700577_1703190_+\|aminopeptidase-N	unknown	unknown	gnl\|CDD\|237585
NZ_CP046445.1\|WP_142488941.1\|1703337_1704105_-\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183055
NZ_CP046445.1\|WP_142488938.1\|1697898_1699062_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349916
NZ_CP046445.1\|WP_142490082.1\|1690065_1691145_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182543
NZ_CP046445.1\|WP_156263354.1\|1707823_1708834_+\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP046445.1\|WP_156263346.1\|1688690_1689881_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181731
NZ_CP046445.1\|WP_142488946.1\|1709002_1709539_+\|cell-division-protein-ZapC	unknown	unknown	gnl\|CDD\|369220
NZ_CP046445.1\|WP_156263348.1\|1693999_1695214_+\|diaminopropionate-ammonia-lyase	unknown	unknown	gnl\|CDD\|274631
NZ_CP046445.1\|WP_156263349.1\|1695331_1696618_+\|septum-formation-initiator	unknown	unknown	gnl\|CDD\|273283
NZ_CP046445.1\|WP_142488942.1\|1704101_1704893_-\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	unknown	unknown	gnl\|CDD\|183100
NZ_CP046445.1\|WP_142488934.1\|1693330_1693792_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP046445.1\|WP_156263355.1\|1709535_1710645_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225758
NZ_CP046445.1\|WP_142488943.1\|1704902_1706048_-\|FMNH2-dependent-alkanesulfonate-monooxygenase	unknown	unknown	gnl\|CDD\|234821

Protein	Function_ID	Function_description	E-value
NZ_CP046445.1\|WP_142488937.1\|1696641_1697880_+\|hydantoinase/carbamoylase-family-amidase	gnl\|CDD\|237250	PRK12893, PRK12893, Zn-dependent hydrolase.	0
NZ_CP046445.1\|WP_156263347.1\|1691754_1693155_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_CP046445.1\|WP_156263350.1\|1699110_1700313_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP046445.1\|WP_156263352.1\|1706044_1707007_-\|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236929	PRK11553, PRK11553, alkanesulfonate transporter substrate-binding subunit; Provisional.	0
NZ_CP046445.1\|WP_156263353.1\|1707041_1707575_-\|NADPH-dependent-FMN-reductase	gnl\|CDD\|182557	PRK10569, PRK10569, NAD(P)H-dependent FMN reductase; Provisional.	1.44589e-124
NZ_CP046445.1\|WP_142488949.1\|1712865_1714773_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236861	PRK11147, PRK11147, ABC transporter ATPase component; Reviewed.	0
NZ_CP046445.1\|WP_142488948.1\|1710744_1712853_+\|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL	gnl\|CDD\|236981	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL.	0
NZ_CP046445.1\|WP_156263351.1\|1700577_1703190_+\|aminopeptidase-N	gnl\|CDD\|237585	PRK14015, pepN, aminopeptidase N; Provisional.	0
NZ_CP046445.1\|WP_142488941.1\|1703337_1704105_-\|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183055	PRK11247, ssuB, aliphatic sulfonates transport ATP-binding subunit; Provisional.	7.18278e-177
NZ_CP046445.1\|WP_142488938.1\|1697898_1699062_+\|amidohydrolase	gnl\|CDD\|349916	cd05666, M20_Acy1-like, M20 Peptidase aminoacylase 1 subfamily. Peptidase M20 family, uncharacterized subfamily of bacterial proteins predicted as putative amidohydrolases or hippurate hydrolases. These are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. Aminoacylase 1 (ACY1) breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).	0
NZ_CP046445.1\|WP_142490082.1\|1690065_1691145_-\|hypothetical-protein	gnl\|CDD\|182543	PRK10554, PRK10554, outer membrane porin protein C; Provisional.	1.23824e-135
NZ_CP046445.1\|WP_156263354.1\|1707823_1708834_+\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
NZ_CP046445.1\|WP_156263346.1\|1688690_1689881_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181731	PRK09257, PRK09257, aromatic amino acid transaminase.	0
NZ_CP046445.1\|WP_142488946.1\|1709002_1709539_+\|cell-division-protein-ZapC	gnl\|CDD\|369220	pfam07126, ZapC, Cell-division protein ZapC. ZapC is one of four FtsZ-binding components of the Z ring in bacteria. Formation of the Z ring on the cytoplasmic surface of the membrane is the starting process for assembly of the cell-division apparatus. It binds directly to the Z ring, and although it is not essential for absolute cell division it contributes to it by enhancing the interactions between the FtsZ protofilaments (or polymers) which aggregate to form the ring conformation in the Z ring.	3.24264e-91
NZ_CP046445.1\|WP_156263348.1\|1693999_1695214_+\|diaminopropionate-ammonia-lyase	gnl\|CDD\|274631	TIGR03528, 2_3_DAP_am_ly, diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.	0
NZ_CP046445.1\|WP_156263349.1\|1695331_1696618_+\|septum-formation-initiator	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.68647e-150
NZ_CP046445.1\|WP_142488942.1\|1704101_1704893_-\|aliphatic-sulfonate-ABC-transporter-permease-SsuC	gnl\|CDD\|183100	PRK11365, ssuC, aliphatic sulfonate ABC transporter permease SsuC.	8.03388e-167
NZ_CP046445.1\|WP_142488934.1\|1693330_1693792_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.77107e-36
NZ_CP046445.1\|WP_156263355.1\|1709535_1710645_-\|MOSC-domain-containing-protein	gnl\|CDD\|225758	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only].	1.63405e-133
NZ_CP046445.1\|WP_142488943.1\|1704902_1706048_-\|FMNH2-dependent-alkanesulfonate-monooxygenase	gnl\|CDD\|234821	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional.	0

>NZ_CP046445.1|WP_156263351.1|1700577_1703190_+|aminopeptidase-N
MTQQPQAKYRHDYRAPDYLISDIDLTFDLDATKTVVTAVSQVTRHNATAVPLRLDGEDLTLVSVHVNDTAWTDYKEENNQLVLDNLPERFTLRIVNEISPASNTALEGLYQSGVALCTQCEAEGFRHITWYLDRPDVLARFTTKIIADKATYPFLLSNGNRVGEGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELFVDRGNLDRAPWAMTSLINSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNVFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDKVIEMNNFYTLTVYEKGSEIIRMIHTLLGEVNFQKGMQLYFERHDGSAATCDDFVQAMEDASNIDLSHFRRWYSQAGTPIVTVKDDYNPETEQYTLTISQRTPPTAEQEEKHPLHIPFAIELYDNEGKAIPLQKGGHPVHNVLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWDAAQSLLATYIKLNVNRHQQGQPLSLPVHVADAFRAILLDEKIDPALAAEILTLPSATEIAELFEIIDPIAIVAVREALTRTLATELADEFLAIYNHHKLDAYRVEHADIGKRALRNTCLRYLAFGETALANELVSQQYHTADNMTDALAALAASVAAELPCRDALMQEYDDKWHQDGLVMDKWFILQSTSPAADVVNKVRSLLEHRSFTLSNPNRVRSLIGAFASSNPAAFHAEDGSGYQFMVEMLTELNSRNPQVASRLIEPLIRLKRYDAERQAKMRAALEQLKGLENLSGDLYEKISKALA
>NZ_CP046445.1|WP_156263350.1|1699110_1700313_-|nicotinate-phosphoribosyltransferase
MTRFASPVLHTLLDTDAYKLHMQQAVFHHYHDVQVAAEFRCRGDDLLGIYADAIREQVDAMQHLRLQDDEFQWLSGLPFFKEDYLQWLRNFRYDPTQVQISNDNGKLHIRLEGPWREVIMWEVPLLAVISELVHRFRSPEAGVEQALANLEHKLVDFAGLTESLDMSRFRLMDFGTRRRFSREVQQAIVERLQQEPWFVGTSNYDLARRLNLTPMGTQAHEWFQAHQQISPELATSQRAALAAWLEEYPNQLGIALTDCITMDAFLRDFGPEFATAYQGLRHDSGDPQEWGEKAIAHYQKLGIDPMSKVLVFSDNLDLPKAVGLYRHFSSRINLGFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPQIKIAS
>NZ_CP046445.1|WP_142488938.1|1697898_1699062_+|amidohydrolase
MNQEQLKQQLTAWRHHLHANPESAFEEVKTAQFIAEKLQSMGIEVHRDIGKTGLVGVLKCGEGQGVIAIRADIDAIQLTEKGEMSYRSDTPERMHGCGHDGHTCIALGAAQLLLQRQNFNGTVCFVFQPAEEPGYGAKAMMADGVIERFGIEEIYGLHNMPGMKAGTIATRVGGIMASEDNFIIRITGQGAHAARPHMAKDPLVIAAEIILALQTIVSRNVDPNVPAVISCTELHTDGIRNAIPTHVEIKGDTRSDSPEVQALLEERMRTISEAICAMHGAQCEFIYTHEFAPTVNWQQCVDVAVNAAVNVVGAERVEGNVAPMMISEDFGAFLQQVPGCFVFLGNGDASDPQGNTPLHNACYDFNDEILLTGAEYFAEIVRTRLPL
>NZ_CP046445.1|WP_142488937.1|1696641_1697880_+|hydantoinase/carbamoylase-family-amidase
MHHYLQINGQRLIDSLFALGECGALEGGGVCRLAATAEDKAGRDFVVARMKALGLDISVDAIGNVTGVYAGEEALPIVMMGSHIDTVGTGGLYDGNYGVMAGLEVIATLQEAGLRARRPLAVTFFTNEEGVRFQPDMMGSVVFAGEYPLEAALAAKDREGITLDEALRAIGYRGERRPGDMSVDSYVELHIEQGPILDKEGTDIGVVTGVQGISWQELTLTGVSNHAGTTPMSMRHDAGLAAAKIAVFVRELALNLGGDQVATVGHISVKPNLINVIPNQVVMSVDLRNTDNAVLKLAEQQLADFIATTAHDEGVKITSRSLVRFNPVIFADDIVNAVEDEAKRQGLSARRLPSGAGHDAQFMASVCPAGMIFVPCVDGISHNVNEHSDPKDLIAGANVLLQVVLQRAQRPA
>NZ_CP046445.1|WP_156263349.1|1695331_1696618_+|septum-formation-initiator
MNSENAVTERGCNPAKWHSEDTVWVLGLFGTAIGAGVLFLPINAGIGGFWPLLIVFVLAFPITYLAHRGLARFIYSSTTPESTITDAIGEHFGALAGKVFTVIYFFAVYTILIMYAVAITNTAQSFITHQLGMAEPPRALVAIGLILGLMFIVRLGQRLIMRVMSALVYPFILSLIFMALFLIPHWNGAILHTLNLSTVGDGHGMLLTLWMTFPVLVMSFNHYPIISPMVVRQKQRYGLALAERKCGQIQRYGILLMTLVVLFFVLSCVLSLSPQQLAEAKRQNLSILSYLANQFDTPVIAWLSPIIAFVAITKSFLGHYIGAYESLRDLIVETAGARGKKPAIRSVDAAILIFMVLTCWFAAYKNPSILGIIEYISGPTGAVILLLLPMYAIHKLPALAPYRGKASNVFVTLIGLITVSAIFYGMFQ
>NZ_CP046445.1|WP_156263348.1|1693999_1695214_+|diaminopropionate-ammonia-lyase
MTDRINFHFNARRKAYGKGVSLSLLNEQVGGEVLAFHQKFPAYQVTPLRRLDHLSQRLGLGSLHVKDEAQRFGLNAFKGLGGSYAMGKYLADLLGRDINTLSFADLNSAEIKARIKDIVFVTATDGNHGRGVAWAAEQLGLRAVVYMPKGSSPVRAQNIRQHGAECTITDLNYDDTVRLADKAAREQGWVLLQDTAWQGYEQIPTWIMQGYMTLAVEAWEQLRQSGTPLPTHLFLQAGVGSFAGSIMGYFVEKMQHQAPTIVIVEPHQANCLYRSVVINDGQPHSVGGDMATLMAGLACGEPNITSWPMLRDHATCFISADDRLAANGMRLLAAPRPGTDEPFISGESGAIGAGVLHALMTQPEHRELAESLRLNTDAHVLLISTEGDTSPDIYEEIVWFGRNG
>NZ_CP046445.1|WP_142488934.1|1693330_1693792_-|winged-helix-turn-helix-transcriptional-regulator
MKLDTWDKKILTLLQQTNRLSQREIADRVSLSASAVNRRIAALEEAGIIKGSVSVVDASKVGRPITIMAQVTIENERLDLLEEDKQRFVNCPQVQQVYYVTGDFDFLLVINVRDMAEYEGLTRELFFASGNIKSFRTIVSMQNAKQEMTVVIE
>NZ_CP046445.1|WP_156263347.1|1691754_1693155_-|asparagine--tRNA-ligase
MSVVPVADVLQGRVTVDSEVTVRGWVRTRRDSKAGFSFLAVYDGSCFDPVQAVINNSLPNYNQEVLRLTTGCSVVVTGKIVASQGQGQSYELQATSIEVTGWVEDPDTYPMAAKRHSIEYLREVAHLRPRTNMIGAVARVRHTLAQALHRFFDEQGYFWVSTPLITASDTEGAGEMFRVSTLDMENLPRTPEGKVDYDKDFFGKESFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLDDVAGLAEAMLKYVFNAVLTERADDMKFFAERVDSDAISRLERFVSADFAQVDYTDAVTILENCGQKFENPVYWGVDLSSEHERYLAEKHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDARMAEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQNVRDVIPFPRTPRSATF
>NZ_CP046445.1|WP_142490082.1|1690065_1691145_-|hypothetical-protein
MKRNILAVVIPALLVAGAANAAEIYNKNANKLDLYGKVVGKHIWDKSGGDNNSADDSYARIGFKGETQVNDQLAGYGQWEYNLNASKAEGSQDTRTRLAFAGLKAGDYGSFDYGRNYGVFYDALASTDMLVEYGGDTLCQTDNFMTCRTTGVATYRNSNFFGLVDGLSLGLQYQGKNVNGHGVERQNGDGNSYSLGYDFLDGFNVTAAYTNSDRTNGQEADGQGSRAEGWATSAKYDANNLYAAVMYGESNNMTRENDDTFANKTQNFEAVVQYQFDFGLRPSVGYVQSKGKDLAARGTFNGGDADLVKYVEVGSWYYFNKNMNVYGAYRFNLLDDNSYTSSVKLATDDTYVLGLVYQF
>NZ_CP046445.1|WP_156263346.1|1688690_1689881_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MFENITAAPADPILGLADLFRADDRPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENENTKNYLGIDGIPEFGRCTQELLFGKGNAIISDKRARTAQTPGGTGALRVAADFLAKNTSVKTVWVSNPSWPNHKSVFNSAGLEVREYAYYDAANHALDFDGLLASLSEAQAGDVVLFHGCCHNPTGIDPTLEQWEQLAKLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAALHKELIVASSYSKNFGLYNERVGACTLVAADEQTVDRAFSQMKSVIRANYSNPPAHGASVVATILSNDALRAIWEQELNDMRQRIQRMRLLFVNTLAEKGADRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAIVAVL
>NZ_CP046445.1|WP_142488941.1|1703337_1704105_-|aliphatic-sulfonates-ABC-transporter-ATP-binding-protein
MNTARLNQGTPLLLNGVTKRYGENTILNGLDLHIPAGQFVAVVGRSGGGKSTLLRLLAGLEAPNDGELLAGNTPLAQIQEDTRMMFQDARLLPWKTVIDNVGLGLKGNWKAQALQALAAVGLDNRAGEWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEDGKIGLDLTVDLPRPRRVGSVRLAELEAEVLDRVMKRGANEVSVRKHG
>NZ_CP046445.1|WP_142488942.1|1704101_1704893_-|aliphatic-sulfonate-ABC-transporter-permease-SsuC
MANPSRKWLLRIAPWLLPVGIVLIWQLASSVGWLSSRILPSPEGVVEAFWSLSASGELWQHLAISSWRAVIGFSIGGSIGLTLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDETAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFALFIHVILPGALPSIMVGVRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIVLYALLGKLADVSAQWLERRWLRWNPAYVIKEAHA
>NZ_CP046445.1|WP_142488943.1|1704902_1706048_-|FMNH2-dependent-alkanesulfonate-monooxygenase
MSLNLFWFLPTHGDGHYLGTDEGARPVDHAYLQQIAQAADRIGFTGVLIPTGRSCEDAWLVAASMIPVTQRLKFLVALRPSVTSPTVAARQAATLDRLSNGRALFNLVTGSDPQELAGDGVFLDHTERYEASAEFTHVWRRLLEGENVTFEGKHIHVRDAKLFFPPIQQPRPPLYFGGSSDVAQDLAAEQVDLYLTWGEPPELVKEKIEQVRAKAAAHGRKVRFGIRLHVIVRETTEEAWQAADRLIAHLDDATIEKAQAAFARTDSVGQHRMASLHNGKRENLEISPNLWAGVGLVRGGAGTALVGDGPTVAARINEYADLGIDSFILSGYPHLEEAYKVGELLFPHLDVAIPQIPQPQPLSQQGEAVANEFIPRKVAQS
>NZ_CP046445.1|WP_156263352.1|1706044_1707007_-|aliphatic-sulfonate-ABC-transporter-substrate-binding-protein
MFKSLARLSLAGLVALSGLAHAADPAPESLRIGYQKGSVSMVLAKSHQLLEKRYPDTKFSWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVGVEPPKPKAEVILVPEDSPIKTVADLKGHKVAFQKGSSSHNLLLRALQQAGLTFKDIQPVYLSPADARAAFQQNNVDAWAIWDPYYSAALLQGGVKVLKDGETLKQTGSFYLAARPYAEKNGEFVQGVLNTFSEADALTQSQRQACIALLAKTMGLPEPVIATYLDHRPPTVIKPVDASTAVLQQQTADLFYDNRLVPKKIDIRDRIWQPTAQKGAKS
>NZ_CP046445.1|WP_156263353.1|1707041_1707575_-|NADPH-dependent-FMN-reductase
MRVITLAGSPRFPSRSSALLEYAREQLTSLDVEVFHWNLHNFAPEDLLYARFDSPALKTLNEQLKDADGLIVATPVYKASFSGALKTLLDLLPERALEGKIVLPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYQHKPHFTPNLQTRLDSALETFWQALHRRDV
>NZ_CP046445.1|WP_156263354.1|1707823_1708834_+|quinone-dependent-dihydroorotate-dehydrogenase
MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPLEALVRQRVMEKPVTCMGLTFKNPLGLAAGLDKNGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVEAEGLINRMGFNNLGVDHLVENVKKAHFDGVLGINIGKNKDTPVEQGKDDYLICMEKVYAYAGYIAVNISSPNTPGLRTLQYGEALDDLLLAIKNKQNELQATHHKYVPVAVKIAPDLTEEELVQVADSLVRHNIDGVIATNTTLDRSLVQGMKYCDEMGGLSGRPVQLKSTEIIRRLSQELKGRLPIIGVGGIDSVMAAREKMAAGASLVQIYSGFIFKGPPLIKEIVNHI
>NZ_CP046445.1|WP_142488946.1|1709002_1709539_+|cell-division-protein-ZapC
MRIKPDDNWRWYFCDEHDRMMLDLANGMLFRSRFARRMLTPDAFADTGFCVDDAALYFSFEEKCRDLDLSKEQRAELVLNALVAIRFLKPQMPKSWHFLAHGERWSPVTGDAACVSLSENAELVNLLVVEPGDNAALCLLAQPAVTIAGRTMQLGDPIKVMNDRLKPQPVSFSLEQAV
>NZ_CP046445.1|WP_156263355.1|1709535_1710645_-|MOSC-domain-containing-protein
MATLSRLFIHPVKSMRGIGLTHAFADVSGFAYDRIFMVTEPDGTFITARQFPQMVRFTPAPVQDGLHLTAPDGSSSIVRFSDFAPADAPTEVWGNHFTARIAPEAINRWLSEFFSRPVQLRWVGPELTRRVKNFAGVPLSFADGFPFLLTNDASLRDLQKRCPASVQMEQFRPNMVVTGATAWEEDTWKVIRIGDVIFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRTAQDNGDVDFGQNLIPRSSGVIRVGDEVEILSTGPGRIYGAGAEEETPEVEIQPATAVTIQWQGQTIRGNNQQVLLEQLEQAGIRVPYSCRAGICGCCRITLVEGEVSALKKSAIGGDGTILCCSCVPKTSVQLEA
>NZ_CP046445.1|WP_142488948.1|1710744_1712853_+|bifunctional-23S-rRNA-(guanine(2069)-N(7))-methyltransferase-RlmK/23S-rRNA-(guanine(2445)-N(2))-methyltransferase-RlmL
MNSLFASTARGLEELLKTELESLGAQECQVVQGGVHFQGDTRLIYQSLMWSRLASRIMLPMRECKVYSDLDLYLGVQTIDWTEIFAPGATFAVHFSGLNDEIRNSQYGALKVKDAIVDSFTRKNLERPNVDRENPDLRINVRLNKEIASIALDLCGEGLHQRGYRDRAGIAPIKENLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGQWGFKGWAQHDEATWQEVKAEAQTRARAGLAAYESRFYGSDSDARVIERARSNARRAGIGELVSFEVKDVSQLTNPLPKGPYGTVISNPPYGERLDSEPALIALHSLLGRTMKDLFGGWNLSLFSASPELLSCLQLRAERQFKAKNGPLDCVQKNYHLAEKEADSKPASIAEDYANRLRKNLKKFEKWAKQEGIECYRLYDADLPEYNVAVDRYGEWVVVQEYAPPKTVDPQKARQRMLDIIAATINVLNIAPNKLILKTRERQKGKNQYEKMNSKGEFIEVGEYNARLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSASVHAGLGGARTTTTVDMSRTYLEWAERNLRLNGLTGRAHRLLQADVLGWLRESEEQFDLIFIDPPTFSNSKRMEESFDVQRDHLALMKDLKRMLRKGGTIMFSNNKRGFRMDHEGLEELGLKAQEISQKTLSQDFARNRQIHNCWLITAA
>NZ_CP046445.1|WP_142488949.1|1712865_1714773_+|ABC-transporter-ATP-binding-protein
MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNREQGLDDGRIVYEQDLVVARLQQDPPRNVQGSVYDFVAEGIAEQAEYLKGYHEISHLVMTDPSTKNLNEMARLQELLDHHGLWQLENRINEVLAQLGLEADMPLASLSGGWLRKAALGRALVSGPKVLLLDEPTNHLDIETIDWLEGFLKTFGGTIIFISHDRSFIRNMATRIVDLDRGKLVTYPGDYDTYLLEKEENLRVEELQNAEFDRKLAQEEVWIRQGIKARRTRNEGRVRALKAMRRERSERREVMGSARMQVEEASRSGKIVFEMENVNYQVDGKVLVRDFSAQVQRGDKIALIGPNGCGKTTLLKLMLDQLKADSGRIHCGTKLEVAYFDQHRAELDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVMLVSHDRQFVDNTVTECWIFEGQGRIGRYVGGYHDARGQQAQSLATKQSKVKSEAEVAVTKAETAKRSSNKLSYNLQRELEGLPQRLEELEASLEGLQAQVADASFFSQPHDHTQKVLADMAQAEQALEEAFERWEYLEALKNGA

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Crispr_ID: NZ_CP046445_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046445_2

2165927-2166057

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046445_2

>merge|NZ_CP046445|2|2165927-2166057|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCACTGTAGAGAATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP046445|2|2|2165927-2166057|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCACTGTAGAGAATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046445.1\|WP_142489214.1\|2158492_2159128_+\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|238449
NZ_CP046445.1\|WP_156263632.1\|2169920_2171117_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP046445.1\|WP_156263627.1\|2157630_2158449_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293813
NZ_CP046445.1\|WP_156263628.1\|2159209_2160820_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP046445.1\|WP_156263631.1\|2164958_2165834_+\|ferredoxin	unknown	unknown	gnl\|CDD\|349764
NZ_CP046445.1\|WP_156263626.1\|2156780_2157263_+\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377163
NZ_CP046445.1\|WP_156263633.1\|2171232_2172165_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP046445.1\|WP_142489226.1\|2173736_2174903_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP046445.1\|WP_156263625.1\|2156079_2156703_+\|response-regulator	unknown	unknown	gnl\|CDD\|226932
NZ_CP046445.1\|WP_142489217.1\|2163500_2164133_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP046445.1\|WP_142489220.1\|2166215_2167589_-\|MdtK-family-multidrug-efflux-MATE-transporter	unknown	unknown	gnl\|CDD\|234981
NZ_CP046445.1\|WP_156263630.1\|2164125_2164959_+\|dimethyl-sulfoxide-reductase	unknown	unknown	gnl\|CDD\|225839
NZ_CP046445.1\|WP_142489225.1\|2172161_2173187_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP046445.1\|WP_142489228.1\|2175642_2176446_-\|endopeptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP046445.1\|WP_142489227.1\|2174938_2175520_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP046445.1\|WP_106993692.1\|2173482_2173572_+\|YnhF-family-membrane-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_156263629.1\|2161117_2163517_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006
NZ_CP046445.1\|WP_142489222.1\|2168491_2169640_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP046445.1\|WP_142489221.1\|2167812_2168457_+\|riboflavin-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183846
NZ_CP046445.1\|WP_032617828.1\|2157362_2157503_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046445.1\|WP_142489214.1\|2158492_2159128_+\|carbonic-anhydrase	gnl\|CDD\|238449	cd00884, beta_CA_cladeB, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.49905e-92
NZ_CP046445.1\|WP_156263632.1\|2169920_2171117_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP046445.1\|WP_156263627.1\|2157630_2158449_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293813	cd07727, YmaE-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YmaE and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YmaE and Nostoc all1228 proteins.Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry. .	1.74502e-55
NZ_CP046445.1\|WP_156263628.1\|2159209_2160820_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP046445.1\|WP_156263631.1\|2164958_2165834_+\|ferredoxin	gnl\|CDD\|349764	cd03110, SIMIBI_bact_arch, bacterial and archaeal subfamily of SIMIBI. Uncharacterized bacterial and archaeal subfamily of SIMIBI superfamily. Proteins in this superfamily contain an ATP-binding domain and use energy from hydrolysis of ATP to transfer electron or ion. The specific function of this family is unknown.	1.73422e-08
NZ_CP046445.1\|WP_156263626.1\|2156780_2157263_+\|heme-binding-protein	gnl\|CDD\|377163	pfam03928, Haem_degrading, Haem-degrading. Haem_bdg is a bacterial protein that is up-regulated in response to haemin- and peroxide-based oxidative stress. It interacts with the SenS/SenR two-component signal transduction system. Iron binds to surface-exposed lysine residues of an octomeric assembly of the protein.	4.74212e-28
NZ_CP046445.1\|WP_142489225.1\|2172161_2173187_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP046445.1\|WP_142489226.1\|2173736_2174903_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	4.4137e-99
NZ_CP046445.1\|WP_156263625.1\|2156079_2156703_+\|response-regulator	gnl\|CDD\|226932	COG4566, TtrR, Response regulator [Signal transduction mechanisms].	1.40152e-56
NZ_CP046445.1\|WP_142489217.1\|2163500_2164133_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	2.26262e-95
NZ_CP046445.1\|WP_142489220.1\|2166215_2167589_-\|MdtK-family-multidrug-efflux-MATE-transporter	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP046445.1\|WP_156263630.1\|2164125_2164959_+\|dimethyl-sulfoxide-reductase	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.33126e-46
NZ_CP046445.1\|WP_142489228.1\|2175642_2176446_-\|endopeptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	2.04229e-43
NZ_CP046445.1\|WP_142489227.1\|2174938_2175520_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	5.80728e-134
NZ_CP046445.1\|WP_156263629.1\|2161117_2163517_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0
NZ_CP046445.1\|WP_142489222.1\|2168491_2169640_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP046445.1\|WP_142489221.1\|2167812_2168457_+\|riboflavin-synthase-subunit-alpha	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	3.14817e-123
NZ_CP046445.1\|WP_156263633.1\|2171232_2172165_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0

>NZ_CP046445.1|WP_156263631.1|2164958_2165834_+|ferredoxin
MARFRLTQIPAPPGVGESCLRKQLPRHDCQACMVACPVQAITAPATTPVINEAECLQCGRCLFVCPADALQNIRPETRHFTASTLVAPFSTLEPSVEELLMWHQQHGIRAVEMEMDAFPGWVRAVAALNIRLRELNAPVWQIVAPQRKAINTGRRHFIKVREVDVQSSTVSVGVRARRQTFSALSEYQLSLDRAQCTVCGACSRVCMEKALSRGEGALTFSSSSCTGCNSCAVVCPVDAVRIDRQEGENRVLHFPWIQKTCRCCQRAFYTFDPETERCAVCQRHKYGMREA
>NZ_CP046445.1|WP_156263630.1|2164125_2164959_+|dimethyl-sulfoxide-reductase
MHELPLLIFTLLVQGSVGMTLFLTLSARAGSRVPEVKPQLLPGMLIACIAGGLGLMVSTLHLGYPLNAFNALRHVASSWLSREIVFASLYLAALGLCTLVMLVRKQLIPLLLPLAAVLGLIDVWCMSAIYAHTSVITWSHFNTWLMFYGAVGVLGAVALAWLPMLKARSVARERQSVMRFAAAMVVAIVAIRLLAQPDYMAHLASASLSGVITLPHQPMEIFTRLSGLRLLSWTLSAVGALLFAVSAWRQGKFGLMVGSLLLVLSEVLFRFMFFCIN
>NZ_CP046445.1|WP_142489217.1|2163500_2164133_+|dimethylsulfoxide-reductase-subunit-B
MSQQYKEYPPVSDKQLGFFIDSSRCSGCKACQVACKDKHNLEVGRRFRRVYEVKGGGFIPTGQGGYANNVYAFTLSISCNHCADPICTKNCPTTAMHKRPGDGIVRVDTNKCVGCGYCAWSCPYGAPQMNEEAGQMSKCDFCVDLQAKGEQPICVATCPLGAIQFGPIEELRAKYGNLCDVQGLPASSITQPNLVIKPHQGAEKEEQPHA
>NZ_CP046445.1|WP_156263629.1|2161117_2163517_+|molybdopterin-dependent-oxidoreductase
MSERKEKREALFPEITRRGLLKAGSALVTLPFVMSGKAMAAKTAAGTAQASAENAERVVQTCSTFDCGGKCDIRAHVADGVVTQITTRPDSALDPQMPVMRACVRGRSYRKFVYHPDRLKYPMKRVGKRGEGKFERISWEEATTLIADNLQRITAKYGPACRFVHNNTATSGGTFSGDKMMRRLLNLTGGYLEYYHSVSMGNTAAATPYTYGTAASGNSLDTLADTKLVILWGHNPTETIFGHTNHYFQQMKQNGTRFIVVDPRYSDTVASLADEWISLLPATDNALMDAMMYVIVSENLHDKAFIERYTQGFDEASMPEGVPANESLVAYLMGDKDGQVKTPEWAEKITRVPAQTIRQLARDYANTKPAALIQGWGPQRHNCGERTARGSTLLATLTGNVGIKGGWAAGYGGCGNRKFAAGPEMPDNPVKESISIMNWVQAADDASKVTAEAGLKGADKLNSNIRILFSLAGNYLANQNPDLHQAVKVLEDESKIEFIVASDLYMTPSARYADLLLPETSFMERWNIGETWGTASYLILSEKLIEPEFERRSDYDWQREVAAKLGIEPQFSEGRTEQEWIEHIWEQTRLSMPDEQLPTFAELREKRQHLFKSKPYVAFEDNIRDPQNHPFPTPSGKIEIFSKRLYDMNNPEIPALSHYVPAHEGPEDALAKQFPLQLITWKGKNRANSTQYANPWLQEVQVQKLWINPMDAQQRGIRQGDSVRIHNQRGVCQVPAEVTQRIMPGVVAMQAGAWWQPDADGVDHGGCANVLSSARITPLAKGNSHQTMLVEVAKYEPAV
>NZ_CP046445.1|WP_156263628.1|2159209_2160820_-|FAD-NAD(P)-binding-protein
MKRIAIIGAGPTGIYTFFSLLNHRTPLCITVFEQAEKAGIGMPYSDEENSKMMLANIASIEIPPLVSTYIDWLRSLDDAHLARYGVEQSTLHVRQFLPRILLGEYFRDQFVQLVDRAKKAGFDIEVRESCQVTDVEATPDGVNILTEEESAPKLFDLVVIATGHVWPDEDNASRSFFPSPWSGLMEAKIRACNVGIMGTSLSGLDAAMAVAVQHGKFIEADNEQIQFRLDEGSEALKIVLMSRSGILPEADFYCPIPYEPLTLATEPAIDAAIEQGSEGLLDRIFDLIVAELQHADPQWSDAVALETLTADSIRDAWFADREKHGPFRWAVSNLDEVERNKRDKRTVPWRYTILRLHEAVEKIVPHLTKQDKERFKVGLARIFIDNYAAIPSQSIRRLLALREAGVISILTLGDDYEMALKEDRTVIHARDEAWYFDVFIDARGQQPLKTKDLPFPVLRHQLESAGEDIPDVGDDYTLLAPDYLRGKIAFGALPYLMHDRPFVQGLVVCAEIGEAMAKAAVQPASRVRRRLPFTTE
>NZ_CP046445.1|WP_142489214.1|2158492_2159128_+|carbonic-anhydrase
MQHIIEGFLSFQKEVFPQRKDLFRSLASSQNPKALFISCSDSRLVPELVTQQDPGQLFVIRNAGNIVPPFGPEPGGVSATIEYAVVALGITDIVICGHSNCGAMKAIADNANLEPMPAVSHWLRYSDAAKAVVENKTWDNPTDKVNAMVQENVFAQLSNIKTHPSVAVGLRNNAIRLHGWVYDIESGAILALDKDSKTFVSLSDNPGVYFE
>NZ_CP046445.1|WP_156263627.1|2157630_2158449_+|MBL-fold-metallo-hydrolase
MIVLCKTCGTSYDVASEPQQCAICEDERQYVPATGQEWINFSTLTATHTNKWQQLEASLLSIKTVPAFAISQRAILLRTPQGNVLWDCIANLDPATHALVTALGGIDAIAISHPHYYSTMQDWAAAFNAPVYLHASDRQWVMRSSPALRFWEGDSLELAPDVTLLRLGGHFAGGTVLHWNLDGGVLLAGDILQVTPGKDAVSFMWSYPNMLPLPANEVSEIAARLDDVRFERLYGAFEGQNISASAREIVMRSVQKYIACLNSGPVGKLEKP
>NZ_CP046445.1|WP_032617828.1|2157362_2157503_-|hypothetical-protein
MEIDLNNLVFDGLDEAEERNAERLEDADKKAQAIVADDDCGDACKI
>NZ_CP046445.1|WP_156263626.1|2156780_2157263_+|heme-binding-protein
MKKLMMAAVCVAGMVSVSAHAQSVAQKNLSLTQANALASAAIQACTAKNYQVSVTVVDRAGVVKAVQRTDNAGPHTLKASEMKAFTALSTKNASGKVMESAQSNAGAQNLRDIPGLLLLAGGLPVKEGDEVIGAIGIGGAPGGHLDEACAQQAIDGMNKS
>NZ_CP046445.1|WP_156263625.1|2156079_2156703_+|response-regulator
MDNVIWLIDDDASVRESLVFLLSGMHWRVEPYESIAAFTAAHGEEQALTGCLLLDMRMPGKGGLAWLEEGAWPWPLLPVILMTGHGTIDACRRAFHNGVFEFFTKPLDADKLIESITAALAESQQRIVRWQEARRVRALFEQLTAREHEVLLALMEGSSNKEVAARLNLSPRTVEAHRAAVFLKLGVSSLVQAIREYDKLQSVELPG
>NZ_CP046445.1|WP_142489220.1|2166215_2167589_-|MdtK-family-multidrug-efflux-MATE-transporter
MQKYLIEARQLLALAIPVILAQIAQTSMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPTIAQLNGSGRRERIAHQIRQGFWLAGFVSVLIMIVLWNAGYIIHAMRNIDPALADKAVGYLRALLWGTPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYVFIYGHFGMPELGGVGCGVATAAVYWVMFFGMLSYVKRARSMRDIRYEAGFSKPDMAVVKRLVQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPLSLAASVTIRVGYRLGQGSTLDAQTAARTGIGVGVCMAVCTALFTVTLREQIALLYNDNPEVVILASQLMLLAAIYQISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPSGYILALTDLVVDRMGPAGFWMGFIIGLTSAAIMMMLRMRFLQRQPSSVILQRAAR
>NZ_CP046445.1|WP_142489221.1|2167812_2168457_+|riboflavin-synthase-subunit-alpha
MFTGIVQGTAKLVSIDEKPNFRTHVVALPDEMLDGLETGASVAHNGCCLTVTEINGNLISFDLMKETLRITNLGDLAEGDIVNVERAAKFSDEIGGHLMSGHIMTTAEISKILTSENNRQIWFKVQDPSLMKYILYKGFIGVDGISLTVGEVTPTRFCVHLIPETLQRTTLGNKKLGHRVNIEIDPQTQAVVDTVERVLAAKEAAAIQQTLNDA
>NZ_CP046445.1|WP_142489222.1|2168491_2169640_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSIRNDDWFRIVNELLSRAGITINGPASSDLQIKHPDFFKRVLKQGSLGLGESYMDGWWECERLDIFFNNVLRAGLETQLPSHLKDTLRIATARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPTMQYSCGYWKEATTLEQAQQDKLRLICEKLQLKPGMRVLDIGCGWGGLAHFMAHHYGVSVVGVTISAEQQKMAQARCEGLDVTILLQDYRDLRDQFDRIVSVGMFEHVGPKNYRTYFEVVDRNLKPDGLFLLHTIGSQKTDHRVDPWIDKYIFPNGCLPSVRQIANASEPHFVMEDWHNFGADYDTTLMAWHERFLAAWPEIADNYSERFKRMFSYYLNACAGAFRARDIHLWQVVFSRGVEHGLRVAR
>NZ_CP046445.1|WP_156263632.1|2169920_2171117_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MTPGKGFLVWLGGLSVLGFLATDMYLPAFSIMQEDLQTPAAAISASLSLFLAGFAFAQLLWGPMSDRFGRKPVLLAGLAIFALGCLGMLWVRDATWLLVLRFIQAVGVCAAAVTWQALVTDYYPASRTNRIFATIMPLVGLSPALAPLLGSWILAHFSWQAIFAVLFVITLVLMIPAFSLKPAAVKNEQPKQRVTFLSLLRSRTYRGNVLIYAACSASFFAWLTGSPFILSDMGYSPAAIGLSYVPQTIAFLIGGYGCRAALQKWQGHQMLPWLLGLFALSVIATWAVGFIPGVGLVELLSPFCLMAVANGAIYPIVVAQALRPFPQATGSAAALQNTLQLGLCFLASLMVSWLIATPLLTTTSVMVATVVLAALGYRMQYVRAEQQDDRLQAESSRA
>NZ_CP046445.1|WP_156263633.1|2171232_2172165_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSGAAQELHRVPSAISYTVRQLEEWLAVPLFERRHRDVELTPAGMWFLKEGRSVIKKMQITREQCQQIANGWRGHISIAVDNIVRPERTRQMIVDFYRHFSDVELRVSQEVFNGVWDALADGRVEMAIGATQAIPVGGRYAFRDMGTLSWICVVASHHPLAAMEGPLSDDTLRNWPSLVREDTSRSLPKRITWLLDNQRRIVTPDWESSATCLSAGLCVGMVPVHFARPWIDSGKWVALSLENPFPDAACCLTWQQNDMSPALAWLLDYLGDSETMNREWLREPEVLTPGED
>NZ_CP046445.1|WP_142489225.1|2172161_2173187_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNNVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAPYFAEIIEAVEKNCFQKGYTLILGNAWNSLEKQRAYLSMMAQKRVDGLLVMCSEYPESLLTMLEEYRNIPMVVMDWGEAKADFTDSVIDNAFEGGYMAGRYLIERGHREIGVIPGALERNTGAGRLAGFMKAMEEALITVPENWIVQGDFEPESGYRAMQQILSQSPRPTAIFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARFFTPALTTIHQPKDSLGETAFNMLLDRIVNKREESQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP046445.1|WP_106993692.1|2173482_2173572_+|YnhF-family-membrane-protein
MSTDLKFSLITTIIVLSLIVASGLTAALH
>NZ_CP046445.1|WP_142489226.1|2173736_2174903_+|MFS-transporter
MRINFPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAIGVMVGAPLMTLLLSHRGRRNALIFLMAIFTVGNVLSALSPDYTTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTIANIGGVPAATWMGEAIGWRMSFLATALLGVVSMIALFFSLPAGGAGEKPEVRKELAVLLRPQVLSALLTTVLGAGAMFTLYTYIAPVLHDINQATPAFITAMLVLIGVGFSIGNYLGGKLADKSVSGTLKGFLLLLIVIMLAIPWLARNEVGAAVAMVVWGMATFAVVPPLQMRVMRVASDAPGLSSSVNIGAFNLGNALGAAAGGAVISSGMGYSFVPVMGAIIAGLGLILVFASERKQPEPVCATE
>NZ_CP046445.1|WP_142489227.1|2174938_2175520_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETLEYHYGKHHQTYVTNLNNLIGGTAFEGKTLEEIVRTSEGGVFNNAAQVWNHTFYWHCLAPNAGGEPTGELAAAITAAFGSFAEFKAKFTDAAVKNFGAGWTWLVKEADGTLAIVSTSNAGTPLTTRAIPLLTVDVWEHAYYIDYRNARPNYLEHFWALVNWEFVAKNFAA
>NZ_CP046445.1|WP_142489228.1|2175642_2176446_-|endopeptidase
MARINKFSITLCALLFTSLTFTPVANASEQARPSAAHKTHLAKATEPKKKSSTSKTTKKESTSKKSSTKKSLAKTQSTHSSKKSRTTSRNASRTTQTASRVVTEKCTTRKGRKAQCVKTSKTTTLAEAHKVRVQKAQKTAMNKLMGQIGKPYRWGGSSPRTGFDCSGLVYYAYKDLVKFRIPRTANEMYHLRDASPVDRGELESGDLVFFRTQGRGTADHVGVYVGNGKFIQSPRTGQDIQITSLSEDYWQRHYVGARRVMKANTLR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP046445_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046445_3

3769488-3769582

Orphan

Consensus_repeat	Method
GTCCGGGCGGGATATGACCCTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046445_3

>merge|NZ_CP046445|3|3769488-3769582|CRISPRCasFinder
GTCCGGGCGGGATATGACCCTGACCGGGGCGCAGGTGATCGCCAGCGGCGAGAACGGCAAAGCGCAGCTGGTGGCCGGGCGGGATATGACCCTGA

>NZ_CP046445|3|3|3769488-3769582|CRISPRCasFinder
GTCCGGGCGGGATATGACCCTGA	CCGGGGCGCAGGTGATCGCCAGCGGCGAGAACGGCAAAGCGCAGCTGGT
GGCCGGGCGGGATATGACCCTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046445.1\|WP_156264459.1\|3754736_3755609_+\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP046445.1\|WP_142486823.1\|3773144_3773477_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179812
NZ_CP046445.1\|WP_156264460.1\|3757087_3758098_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213
NZ_CP046445.1\|WP_156265177.1\|3776951_3777494_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP046445.1\|WP_156264469.1\|3775992_3776454_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142486819.1\|3761716_3762109_+\|YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|182212
NZ_CP046445.1\|WP_142486824.1\|3773771_3774254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_156264470.1\|3777895_3778231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_156264461.1\|3759082_3760069_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235935
NZ_CP046445.1\|WP_156264464.1\|3764009_3764558_+\|toxin-activating-lysine-acyltransferase	unknown	unknown	gnl\|CDD\|367187
NZ_CP046445.1\|WP_142486816.1\|3760078_3760603_-\|2-oxo-tetronate-isomerase	unknown	unknown	gnl\|CDD\|235149
NZ_CP046445.1\|WP_156264463.1\|3762330_3764010_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP046445.1\|WP_156264472.1\|3779098_3779992_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176166
NZ_CP046445.1\|WP_156264471.1\|3778445_3779006_+\|Ail/Lom-family-outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|185153
NZ_CP046445.1\|WP_156264468.1\|3775180_3775600_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|379649
NZ_CP046445.1\|WP_156264467.1\|3774707_3774953_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142486813.1\|3755684_3757088_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP046445.1\|WP_156264466.1\|3774333_3774609_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142486818.1\|3761061_3761574_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_156264462.1\|3760599_3761052_-\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205

Protein	Function_ID	Function_description	E-value
NZ_CP046445.1\|WP_156264459.1\|3754736_3755609_+\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	5.72292e-128
NZ_CP046445.1\|WP_142486823.1\|3773144_3773477_+\|hypothetical-protein	gnl\|CDD\|179812	PRK04293, PRK04293, adenylosuccinate synthetase; Provisional.	0.00525857
NZ_CP046445.1\|WP_156264460.1\|3757087_3758098_+\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	1.6579e-101
NZ_CP046445.1\|WP_156265177.1\|3776951_3777494_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	0.00289399
NZ_CP046445.1\|WP_142486819.1\|3761716_3762109_+\|YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|182212	PRK10053, PRK10053, YdeI family stress tolerance OB fold protein.	2.39971e-82
NZ_CP046445.1\|WP_156264461.1\|3759082_3760069_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235935	PRK07109, PRK07109, short chain dehydrogenase; Provisional.	1.07764e-144
NZ_CP046445.1\|WP_156264464.1\|3764009_3764558_+\|toxin-activating-lysine-acyltransferase	gnl\|CDD\|367187	pfam02794, HlyC, RTX toxin acyltransferase family. Members of this family are enzymes EC:2.3.1.-. involved in fatty acylation of the protoxins (HlyA) at lysine residues, thereby converting them to the active toxin. Acyl-acyl carrier protein (ACP) is the essential acyl donor. This family show a number of conserved residues that are possible candidates for participation in acyl transfer. Site-directed mutagenesis of the single conserved histidine residue in Escherichia coli HlyC resulted in complete inactivation of the enzyme.	2.1186e-57
NZ_CP046445.1\|WP_156264463.1\|3762330_3764010_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	0
NZ_CP046445.1\|WP_156264472.1\|3779098_3779992_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176166	cd08477, PBP2_CrgA_like_8, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 8. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.43971e-96
NZ_CP046445.1\|WP_156264471.1\|3778445_3779006_+\|Ail/Lom-family-outer-membrane-beta-barrel-protein	gnl\|CDD\|185153	PRK15240, PRK15240, resistance to complement killing; Provisional.	4.08345e-40
NZ_CP046445.1\|WP_156264462.1\|3760599_3761052_-\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	1.28826e-31
NZ_CP046445.1\|WP_142486813.1\|3755684_3757088_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_CP046445.1\|WP_142486816.1\|3760078_3760603_-\|2-oxo-tetronate-isomerase	gnl\|CDD\|235149	PRK03657, PRK03657, 2-oxo-tetronate isomerase.	8.3428e-85
NZ_CP046445.1\|WP_156264468.1\|3775180_3775600_+\|SMI1/KNR4-family-protein	gnl\|CDD\|379649	pfam14567, SUKH_5, SMI1-KNR4 cell-wall. Members of this family are related to the SMI1/KNR4-like or SUKH superfamily of proteins.	6.59959e-30

>NZ_CP046445.1|WP_156264464.1|3764009_3764558_+|toxin-activating-lysine-acyltransferase
MRVGHLDIKAPLILGGQESEAEVLGATVWLWMHSPMHRDAPLHALPTLLLPIIKRQQYVLVSENDRPIFFLSWAWLNEEAEARYLTRPAIEMKEEDWDSGDRIWFCDWIAPFGHTPAMYNLMRRDIFPDHVCRALYHRGAQRGKRVMLFHGSHVSRQHAREWQQNHPLTVSLPEAFKGTNHE
>NZ_CP046445.1|WP_156264463.1|3762330_3764010_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKAPHNIALIITSAAGLSLMFPAQAAEPDNQFIIQQQRQRALEQQLTPPVPDVRLSEPSSGFGKIAFPTESPCFPINRVELSGEEALPHWLPLQRIADQAQGRCLGGKGINLLMSTMQNRIVDHGWITTRVLAPSQDLKSGTLKLAIVPGTIRHVKLTEESDDYIQLYSAFPAHEGNLLDLRDIEQGLENLQRLPTVEASMELLPGENPGESDVVIARKQSKMWRIGLSLDDAGTETTGRYQGGVTLSLDNPFSLSDLLYVSASHDLNDKGGKGSKNYTAHYSVPFGYWMLGITGSDYDYHQTVAGLNEDYRYSGKSKNLDIQLSRVLHRSGSQKTTFSYDVLARETRNFIDDTEVGVQRRQTAGWRIGLDHRHYIGQATLDAGISYQRGTRWFGAQPAPEEYWGDATALSKITQLSAQLDLPFAIGTQNFRYNLQYLRQISNTPLTPQDQFAIGNRWTVRGFDGERTLSASHGWYVRNDLAWRTPLPNQEFYLGADYGEVGGYSSDLQVGKHLAGGVAGLRGNAFNTGYDLFAGTPFSKPDGFETSDLTLGFNLNWSW
>NZ_CP046445.1|WP_142486819.1|3761716_3762109_+|YdeI-family-stress-tolerance-OB-fold-protein
MKLTVAPLLCCLLISAAYADDNGGLKKDAAPPPPHSLDEGYRGTEDARTMTVEQAKEMHDGATISLRGNLIDGSGGDKFKFRDKTGTIDTIIPQAVFDGREVKPDNMISINGSLDKKMNPPVVRVDRIQK
>NZ_CP046445.1|WP_142486818.1|3761061_3761574_-|hypothetical-protein
MAKVKENSPPLPGVKQSHAALQFEYDAHRFGFVLLLLIIAAALLGLFSGGYFSEATKTNAAKSVQVEYQRFGRLQSPLELKITLPGQSNAPVTVRIGGEYMARTQTDNIWPQPDEMHSEGGELVLVYQEAKPRQDFTVWLYSTPDQPGKTVTTVTLNNQPGLSFWQFIYP
>NZ_CP046445.1|WP_156264462.1|3760599_3761052_-|DUF421-domain-containing-protein
MEMILRAAAIYLILLVVFKIAGRRALLQMTSFDLILLLIISEATQQALLGEDFSVTGAMLTIITLVVIDMLFGVAKKYISGAESMLDGSPVILVVHGELQNEKLKKVDVSCDDILVSARQNHGIYHLEKIKYAILERNGHISIIPEESES
>NZ_CP046445.1|WP_142486816.1|3760078_3760603_-|2-oxo-tetronate-isomerase
MKENIWNQAKTTKELTSQVSTVLIDLGWLLTTAESCTGGNVASALCAEKDTASFFGTGVVTFNNEAKHKVLGVSNATLEKYTAVSSQTVGEMAEGALKLADADVSIAISGYAGPDGGEDGTPAGTVWFGWCFRGEVTTAVQHFTGECEDVIEKAVRYALSELLRQIPHWKKQLH
>NZ_CP046445.1|WP_156264461.1|3759082_3760069_-|SDR-family-NAD(P)-dependent-oxidoreductase
MSVVLITGATAGVGKATALRFAAAGYDVGLIARDNHSLEATRAEVANYGVNCHAVSLDVADAAALSGAAQTLADRLGAIDVWINNAMCTTLAPFYSITDDEFRRVTEVTYLGCVNGTRAALEQMIPRDSGVIIQVGSALAYRSIPLQSAYCGAKAAIRGFTDALRTELMHERSGVHLAMVQMPGLNTPQFDWARNKFAYSMRPVAPVFQPEVAAEAIFGVAQRPVRELWVGRSTIGAIVGQFLFPGFLDRMMVKKAWEGQMDEALNPPDRRDNLTEPVGGEHRIHGRFSPEAKPRAAAMTSGVPGKALLGTVALAGLLLIGKCLGRRK
>NZ_CP046445.1|WP_156264460.1|3757087_3758098_+|cytochrome-d-ubiquinol-oxidase-subunit-II
MGVDISVIWFAIIVFATLMYIIMDGFDLGIGMLFYFERDPQARDVMVNSVAPVWDGNETWLVLGGAGLFGAFPLAYAVIIDALTIPLTAMLIGLIFRGVAFEFRFKATPSHRAFWDYSFAGGSLLATFSQGIVVGAMINGFDVEGRRFAGSALDWLTPFNLFCGLGLMVAYTLLGTTWLIMKSEGALQRHMRELTRHVLLALLGVVAVVSIWTPLGWQYVSERWFSLPNFFYFMPVPLLVAVFGIWIWRLTRNPHSHARPFLLTLGLIFLGFSGLGISLWPNIIPPRITIWDAAAPPSSQLFMLVGTLLIIPLILVYTAWSYYVFRGKVTDTEGYH
>NZ_CP046445.1|WP_142486813.1|3755684_3757088_+|cytochrome-ubiquinol-oxidase-subunit-I
MFELDAFHLARLQFAFTVSFHIIFPALTIGLASYLVVLEGMWLKTKNDVWRSLYHFWLKIFAVNFGMGVVSGLVMAYQFGTNWSGFSQFAGSITGPLLTYEVLTAFFLEAGFLGVMLFGWNKVGPGLHFFATCMVALGTLMSTFWILASNSWMHTPQGFSIENGQVIPEDWFAIIFNPSFPYRLIHMSIAAFLSSALFVGASGAWHLLRGNDSPAVRKMFSMALWMALLVAPIQAFVGDMHGLNTLEHQPAKIAAIEGHWENPPGEATPLLLFGVPDMEEERTKYGLEIPALGSLILTHSLDKQVPALKDFPKDERPNSLIVFWSFRVMVGLGLLMILMGVISLWLRHRHRLYHSRPFHWFALSMGPAGLVAILAGWITTEVGRQPWVVYGYLRTIDAVSLHSTLQMSISLLAFIVVYCSVFGVGYVYLVRLIKKGPQPTDNLSLNTDGRPARPLSAAEPVPEEEKP
>NZ_CP046445.1|WP_156264459.1|3754736_3755609_+|manganese-catalase-family-protein
MFRHVKQLQYTVRVAEPNPGLANLLLEQFGGPQGELAAACRYFTQGLGDDDAGRREMLMDIATEELSHLEIIGTLVGMLNKGAKGELAEGTEQEAELYRSLTANGNDSHITSLLYGGGPPLTNSGGVPWTAAYIDTIGEPTADLRSNIAAEARAKIIYERLINVTDDVGVKDALAFLMTREAAHQLSFEKALQSIRNNFPPGKLPPIEQYSTTYYNMSAGDDLRGSWNSDENFEYVADPQPAVDGGDGSAQVSLSKEQAALLKAMASRTESDPNANPLTGAELGAGKKKP
>NZ_CP046445.1|WP_142486823.1|3773144_3773477_+|hypothetical-protein
MKELDDLHNKIGQLLSDAGPANAKKIITRAKLALDGESCEYEYDYIDQDDHEDWFVPDKLASYDLRLLLVRMRDFHLQNNMTNGKPAWTNCEIIIDIPEGKININFSYND
>NZ_CP046445.1|WP_142486824.1|3773771_3774254_+|hypothetical-protein
MTNKSLDQLRAGLDCYQSNGYVESNSFNDPNDDALEYLGMLLVDDQPTALKYCQSFLQQSQVNDELKSAALDFLLLSSEWNFAYQYLYSQAERLSIPELEKSFFYFCCDKNEATPYPLPEGLFTKLLARFEVVKNEPDAYFYHLHEAYNDFVKTLSDTQN
>NZ_CP046445.1|WP_156264466.1|3774333_3774609_+|hypothetical-protein
MTIEKTTLIVDKMQRMATLLELGGYAEWSASIFKLAKKYELDPDDTKHIFLNFYGGMGSLNDLVLYRNGKVLMDENDELAQLRRDLFNLLS
>NZ_CP046445.1|WP_156264467.1|3774707_3774953_+|hypothetical-protein
MTVKWAHFIDVLGKKVNSVEVINLCQAIGETPVISADAGEGKVDMLPGWINGWSKYDYGNHSVHLQYTEHNHLCHETLIKN
>NZ_CP046445.1|WP_156264468.1|3775180_3775600_+|SMI1/KNR4-family-protein
MANSLNDVIEELKVVSGNERSNIPLPDDDLISKYEGETGFSFSPDYKKLLKEVGNIYYGTIELLSVTEDKKFYGELLTAINDAKELGVPESWLPICEDNGSYYCLDQQGRVQYWTGDGASEEQWPDLAAWVKDVWIDGN
>NZ_CP046445.1|WP_156264469.1|3775992_3776454_+|hypothetical-protein
MTVEWAHFIDVLGKRENSVEVINLCHAIGESPVISADAGEYNDPDGKTKHYKFYQSGIEMGFRKDCLNHIHFYFGNEDGYSPFTGNFIPGIKGGMDRAFITKLSGKPTLSGEGKVDMLLGWINGWSKYDYGNHSVHLQYTEHNHLCHATLIKN
>NZ_CP046445.1|WP_156265177.1|3776951_3777494_+|SMI1/KNR4-family-protein
MDDLTTLLNNRNGFYGFESALHVFPLETDGEEIGVIDWNDNRLWIDCYDDLAHNAIFFAEDVFGGQFCIKQDGIYTFDPETGSFDYLAPDINEWCKQILEDYEVLTGYPLANAWQKKYGSIPAGYRLVPKIPFVAGGEYEPDNLYLEKSAVAMKARANIALQIRDVPDGSNIRLRLIDRD
>NZ_CP046445.1|WP_156264470.1|3777895_3778231_+|hypothetical-protein
MRESQAIYNDIGSVLVAAAPDSAAKIIARAELSPEDNHCKCEFDYVDSTSGETNWFTAGAQANADLLDLLVEMRNFFVDNISSQQPAFWHACEITVDVETLRIAIDFKYGD
>NZ_CP046445.1|WP_156264471.1|3778445_3779006_+|Ail/Lom-family-outer-membrane-beta-barrel-protein
MKKITLAVCVAASLASGAALADNHTVSVGYAQSNVEDFKNIRGVNVQYRYEWDSPVSLVGSFTYMSGDQDEHYYLASDSIKNHIEVKYYSLMAGPAYRLNEFVSLYALGGVARVKADGHTTWVNGGDNYTERNGIDDKSTSFAYGAGVQFNATPDLAIHVGYEGTTADLGDDYGINGWNLGVGYSF
>NZ_CP046445.1|WP_156264472.1|3779098_3779992_-|LysR-family-transcriptional-regulator
MDKLRGMETFIAVVESGSFTGAAARLEMSAVMVGKYIAWLEAQLGTRLLERNTRRQSLTDAGRVWFEEAKRVIEQVAIAERSVERLRTAPAGTLRVTAPTSFGGCVIAPLTATFLQRFPEVRVELDLTNRMVDLVEEGVNLAIRIGDIHTGDLVAKYLCPYRMVICAAPDYLARHGTPQTPDDLVEHLCLSHTVWTARNEWRLPGVEGEVRWKRDAILRCNDGYGLRMAAIAGAGLLLQPEVLVADELANGRLIRVLESYTPQPRPVHLLWRQDLRPLPKLTQFIAHIMQAGEECGL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP046445_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046445_4

4168057-4168143

Orphan

Consensus_repeat	Method
CGGTTCATCCCCCAGATGCGGGGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046445_4

>merge|NZ_CP046445|4|4168057-4168143|CRISPRCasFinder
CGGTTCATCCCCCAGATGCGGGGAACTCGAATCAATCTTGCTATCACGGCAACCTAATACCGGTTCATCCCCGCAGATGCGGGGAAC

>NZ_CP046445|4|4|4168057-4168143|CRISPRCasFinder
CGGTTCATCCCCCAGATGCGGGGAAC	TCGAATCAATCTTGCTATCACGGCAACCTAATACC
GGTTCATCCCCGCAGATGCGGGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046445.1\|WP_156264666.1\|4164834_4165530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_156264664.1\|4161948_4163796_+\|RNA-polymerase-sigma-factor-RpoD	unknown	unknown	gnl\|CDD\|235549
NZ_CP046445.1\|WP_156264662.1\|4157662_4158334_+\|response-regulator	unknown	unknown	gnl\|CDD\|225107
NZ_CP046445.1\|WP_156264665.1\|4164009_4164516_-\|G/U-mismatch-specific-DNA-glycosylase	unknown	unknown	gnl\|CDD\|182301
NZ_CP046445.1\|WP_156264669.1\|4173384_4174128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142487144.1\|4160053_4161799_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP046445.1\|WP_156264670.1\|4175168_4175738_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP046445.1\|WP_156264663.1\|4158351_4159365_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP046445.1\|WP_156264671.1\|4178917_4179937_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP046445.1\|WP_142489623.1\|4170493_4170802_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236666
NZ_CP046445.1\|WP_105902572.1\|4175796_4176492_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_CP046445.1\|WP_103822946.1\|4165738_4165960_+\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|225848
NZ_CP046445.1\|WP_103822947.1\|4166077_4167193_+\|inovirus-type-Gp2-protein	unknown	unknown	gnl\|CDD\|371695
NZ_CP046445.1\|WP_103825497.1\|4176503_4178897_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP046445.1\|WP_156264668.1\|4172944_4173361_+\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350229
NZ_CP046445.1\|WP_103822948.1\|4167220_4167778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142489628.1\|4180223_4180775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046445.1\|WP_142489622.1\|4171030_4172296_+\|NO-inducible-flavohemoprotein	unknown	unknown	gnl\|CDD\|237337
NZ_CP046445.1\|WP_001144069.1\|4159601_4159817_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP046445.1\|WP_039032651.1\|4172717_4172948_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226863

Protein	Function_ID	Function_description	E-value
NZ_CP046445.1\|WP_156264664.1\|4161948_4163796_+\|RNA-polymerase-sigma-factor-RpoD	gnl\|CDD\|235549	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated.	0
NZ_CP046445.1\|WP_156264662.1\|4157662_4158334_+\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.86982e-47
NZ_CP046445.1\|WP_156264665.1\|4164009_4164516_-\|G/U-mismatch-specific-DNA-glycosylase	gnl\|CDD\|182301	PRK10201, PRK10201, G/U mismatch-specific DNA glycosylase.	2.8696e-130
NZ_CP046445.1\|WP_142487144.1\|4160053_4161799_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_CP046445.1\|WP_156264670.1\|4175168_4175738_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.42819e-21
NZ_CP046445.1\|WP_156264663.1\|4158351_4159365_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NZ_CP046445.1\|WP_156264671.1\|4178917_4179937_+\|fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.43558e-19
NZ_CP046445.1\|WP_142489623.1\|4170493_4170802_-\|hypothetical-protein	gnl\|CDD\|236666	PRK10244, PRK10244, anti-adapter protein IraP.	1.33471e-05
NZ_CP046445.1\|WP_105902572.1\|4175796_4176492_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	1.03281e-74
NZ_CP046445.1\|WP_103822946.1\|4165738_4165960_+\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	2.49866e-11
NZ_CP046445.1\|WP_103822947.1\|4166077_4167193_+\|inovirus-type-Gp2-protein	gnl\|CDD\|371695	pfam11726, Inovirus_Gp2, Inovirus Gp2. Isoform G2P plays an essential role in viral DNA replication; it binds to the origin of replication and cleaves the dsDNA replicative form I (RFI) and becomes covalently bound to it via phosphotyrosine bond, generating the dsDNA replicative form II (RFII).	3.43064e-15
NZ_CP046445.1\|WP_103825497.1\|4176503_4178897_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP046445.1\|WP_156264668.1\|4172944_4173361_+\|PIN-domain-containing-protein	gnl\|CDD\|350229	cd09881, PIN_VapC4-5_FitB-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4 and VapC5, and Neisseria gonorrhoeae FitB and related proteins. This family includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This family belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.51716e-48
NZ_CP046445.1\|WP_142489622.1\|4171030_4172296_+\|NO-inducible-flavohemoprotein	gnl\|CDD\|237337	PRK13289, PRK13289, NO-inducible flavohemoprotein.	0
NZ_CP046445.1\|WP_001144069.1\|4159601_4159817_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.25342e-17
NZ_CP046445.1\|WP_039032651.1\|4172717_4172948_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|226863	COG4456, VagC, Virulence-associated protein and related proteins [Function unknown].	8.05369e-11

>NZ_CP046445.1|WP_103822948.1|4167220_4167778_+|hypothetical-protein
MDTENNNEYDWGLIEKNIRRIYGNKAYRRITEDEWWKCKYLERRKKLRKQLELKRDFVVKSLLFTSFYDNPNTMVKKNRRNGQRGRWNIDRFSRRIYIKDLGSLDTVAHLLTKMSWHPHHSYIFAVALYPGVTSQQLADYLGMTNSNHRMVFRRLNNDLYLVGWQFVSCQMGAQNKPWGWYLEKI
>NZ_CP046445.1|WP_103822947.1|4166077_4167193_+|inovirus-type-Gp2-protein
MINNKTPSRDPIPQNPVINNITRSSAYPDIRPGGEFLYDNVLWPVMPEESQQNTKIMNSLFRTVDKTYRSCSRFLAVRYDFHLPQYSPDNNVITEFHRLLIPALRKIYPKSFMRVFWVREQNKAPAQHYHYLLMMDGNAVRHPHKINQLVKCYWKHATGGRVWLPKHGYYLVNRDDTEALTALLLRVSYFAKRYSKTHVADNIGLSGTQHYSCLKKARRIKPAQLQINPASSVPAQEHCPLPGKLDSLFAEKENRAQFSQIENETPEALLAYVTMLVDKKSFRSKALLRALRRLHAFKKISPLITPSSTINSSTSPHWLRHFERYYREYWPCNISVTQYCHWYYLNPGTASRYLCNYPTNLINPWLLKAWL
>NZ_CP046445.1|WP_103822946.1|4165738_4165960_+|AlpA-family-phage-regulatory-protein
MKNKSSMSDRVIALHQPQRLIRINAMLELLDCSRTTLYRWVKSGYFPKPLMRSGKTLGWPASLYENWLAQNDK
>NZ_CP046445.1|WP_156264666.1|4164834_4165530_+|hypothetical-protein
MDFSEILGKKVQQQIQRNKPGPKDCVSLYNILRSAKHHYTLATYADLSSALLTLLSGKFDIKFFIINKDTIVDTEMINFGQCLELDYKKGKLTSPELANYVAITPTLLLSGINESLSNESLHTHGFLRNEIAPLLDFELMNVAEDKTNDKEKYSQRLAEREIQNPPPLKGENYAIKREELLIAALAIIGQNQKDGKKIIVPTITDLLDEIEKQKKVLAFHRDITYVPQRSS
>NZ_CP046445.1|WP_156264665.1|4164009_4164516_-|G/U-mismatch-specific-DNA-glycosylase
MINDILAPGLRVVFCGINPGKSSAHTGFHFAHPRNRFWKVIYQAGFTDKLLKPEEEQQLLDTRCGITMLVERPTVQASEVNLHELRSGGRELIKKIEDYQPAALAILGKQAYEQAFSQRGVQWGKQSITIGVTQVWVLPNPSGLNRATVEKLVEAYRELDEALVTRGL
>NZ_CP046445.1|WP_156264664.1|4161948_4163796_+|RNA-polymerase-sigma-factor-RpoD
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAENSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATHVGSELSQEEMDDDEDEDEEDGDDDSSDDDNSIDPELAREKFGELRTQYEVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKMCVEQCKMPKKNFITLFTGNETSETWFNAAIAMNKPWSEKLRDVADDVHRGLQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD
>NZ_CP046445.1|WP_142487144.1|4160053_4161799_+|DNA-primase
MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAVDFLMNYDKLEFVETVEELAAMHNLEVPYEAGSGPSQIERHQRQTLYQLMDGLNAFYQQSLKQPAAEPARQYLNQRGLSDDVIARFAIGYAPPGWDNVLKRFGGNSEDRKSLIDAGMLVTNDKGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGDALPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPQRLLVVEGYMDVVALAQFDINYAVASLGTSTTADHIQLLFRVTNTVVCCYDGDRAGREAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKAAFEARMEQAQPLSTFLFNSLMPQVDLSTPDGRAQLSTLALPLITQVPGETLRIYLRQELGKKLGILDDSQLERLMPKLAESGAARPAPQLKRTTMRILIGLLVQNPELAPKVPSLAGLDHEKLPGLGLFAELVNTCLSQPGLTTGQLLEHYRGTKASATLEKLSMWDDIADKDIAEETFTDSLNHMFDSMLELRLSELIARSRTHGLTPAEREEVRVITEARARK
>NZ_CP046445.1|WP_001144069.1|4159601_4159817_+|30S-ribosomal-protein-S21
MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTERKRAKASAVKRHAKKLARENARRTRLY
>NZ_CP046445.1|WP_156264663.1|4158351_4159365_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MRVLGIETSCDETGIAIYDDEKGLVANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALKEAGLTAKDIDAVAYTAGPGLVGALLVGATIGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLIGVTGIGQYELLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMASQGTEGRFVFPRPMTDRPGLDFSFSGLKTFAANTIRNNENDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLRAKLAEMMQKRRGEVFYARPEFCTDNGAMIAYAGMVRLKPDATADLSVSVRPRWPLAELPAA
>NZ_CP046445.1|WP_156264662.1|4157662_4158334_+|response-regulator
MTIKIAIADEHTIIRRGVRAMIMDNHTHLTDTHSPLNLCVTGEAASTSELLNLLAQNKIDILLLGYTLIQSLNDMEGLTLVKWLMHHYPTLKVIMLSPDTNPLMIRLALEAGARAYLSRHTNEKILGQALQSVMSGEVFVERTLMNTLFQKGKTSNEALSPRETEVLRLICKGLSLTDISRRMHLSIKTVSAHKMRAMEKLGVKNGCQLYCLLAKTRMFDIVI
>NZ_CP046445.1|WP_142489623.1|4170493_4170802_-|hypothetical-protein
MKMKALLAELVDIIAEQHESEKEVIIQTEALNLVVAALLMRLDDSVRMQLKNEIDESFASQHGCCPTYTDETHILQRAVEELFNFHMRPSLGRRRIQSINQP
>NZ_CP046445.1|WP_142489622.1|4171030_4172296_+|NO-inducible-flavohemoprotein
MLTQEQKQLVEDTVPVLKENGVALTDYFYKRMLRNNPDLQEVFNMGHQRSGAQAKALAGAVLAYAENIDDPGVLAPVIELICHKHVSLNIKAPDYGIVGENLLHSISEVLSVPMDSPLIGAWGAAYKDLADIFIGAEKRLYDERRNTPGSWLGWRAFTVSRKVKESEEITSFYLKPEDGQALPDYRPGQYVTLRVLVPELGLKQPRQYSLSARPGADYLRISVKREDPRAEGQDPGYVSSTLHNAVSEGDTVELSAPAGNFFLLNPEVDNVLISAGVGLTPMMSMTHHLLAEIADPNTVLKADHTEQTQDRKQIFFLHAARSSDVHALRQELAALSEQNSNLHIFIAYEQVKETEVPGEDYHVQGRLDLSAVPAKYLPADADYYLCGPVPFMHEQYRSLLALGIAKERIHSEAFGTGGVGI
>NZ_CP046445.1|WP_039032651.1|4172717_4172948_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MRTVSIFKNGNNRAIRLPRDLDFEGVSELEIVREGDSIILRPVRPTWGSFAQLEKADPDFMAEREDVVTDEGRFDL
>NZ_CP046445.1|WP_156264668.1|4172944_4173361_+|PIN-domain-containing-protein
MNKTYMLDTCICSFIMREQPEAVLKRLEQAVLRNQRIVISAITYSEMRFGATGPKSSPRHIELVDAFCARLDAILPWDSAAVDATTDIKVALRLAGTPIGPNDTAIAGHAIAAGAVLVTNNVREFERVPGLTIEDWVK
>NZ_CP046445.1|WP_156264669.1|4173384_4174128_+|hypothetical-protein
MDELKIDNPAQRLLDILEEGKQYNTGENCRAVWKKMLHINHDAEHHILIRLSQVMALPERIIQVRENNFSSLRGKSTYWEACVGNAFTSQNLNEAWHTFIRHIDERTLYELGTLSDLFETRGAHSTIDTNEIDSLLNRIRELREEIRHSELPSAMKTMLLKQLTQIQEALESYFISGVEPVMDAVQSTLGLAVIAPEYKEEIKSGSGSQFGDRISSLLSDVANVVTVAGALPALPAAIQSALSLLSK
>NZ_CP046445.1|WP_156264670.1|4175168_4175738_+|type-1-fimbrial-protein
MNMFIKGMASAAAVMIFAPTVALAADGKVTFNGEIITNTCTVISGDKDKIVTLPTVQVSALSAANQTAGTTPFTIGLENCASASDVSVYFEPNEYVSTEGRLKNTIPAGGSDNGADNVDIELLNNNHSVIDLANQTIDPTTGKVTGGNSTVVTPVDGSATLPFYARYFATNAAEAGKVSSYVNFTIVYP
>NZ_CP046445.1|WP_105902572.1|4175796_4176492_+|molecular-chaperone
MTRYFFTFLLFVYIPFANANIVIDGTRVIFPSDRKEVSVRVTNSGDMPSLTQVWVDGGTIQNNTGKDMAPFVVLPPIIRVEPGKGQTYRLVFSGAALPQDRESLYWFNMLDIPPEPKNSQGSNYLQLSIRSRIKLFYRPITLKGNVSEAAKSLTWEFHNDNNTLFVNNPSPWYITIDSITINGNKQPAGMVAPFSTMSINNKEHTLKAMPGKFSFTTINDYGAVVTHNYPQ
>NZ_CP046445.1|WP_103825497.1|4176503_4178897_+|fimbrial-biogenesis-outer-membrane-usher-protein
MRFMEINAGLIIIIPWGVAWSEDAFNFNSAHLHNATHIDLQKFKYGNPMNVGKYRSKLYLNGSYASEVEFELQKVGEKIEPCITPVLFRVMRLKDKTWPEKASCLQLSQINAGISWHYDVGENALNLTIPQALQKPKYRGEINPESIDVGVPAAVLRYQANSYQSINHGDSHNYSYVGLDGSFRAYGWRFYHQSSYQANDNDTQWDNISTYAEKSLFDLSSTLRLGQGWTDGTFFDSVSFVGARVATDKRMLPGSRRGFAPTVTGIARTNARVTVTQNGSLLYEATVPPGKFSFADLYPTNSGGDLIVTIHEADGSQDTFTVPYASIPGLVRKEALYYDLSMGYLDDSYISNRPGFGELTLQYGFNDYISGYMGVNGTDGYYSTLVGSALNTYWGALAVDVSRSSWKTVENDWLDGYRWRVSATKSLTSDTRVTLSMSHSNDARYISIRDAASANNHDNYTYREMTKYTANLSQQIGGGSLSFYGIWSENWKHGTYHSYQLGYSNNYKRLGYYIYAQKSQDANHKNNQIVGISFSIPISGNGNIHTRFNYDKNNGNQLQATYTGSRGEKNELSYGLTTSYDMPKEGGHESSIGANGSYRTHYAYLNASASAGKNQQQYSLGTSGALVAHEGGVIATPDIGETFAIVQAPKAAGATVANRIGRPVDNRGYTIIPYLNPFTENWLDLDPQGISDQVEIVSSSTVVVPDSGAAVKVKFATRTGYPWFANVTLSDGNTPPLGAEVFDSKEIAIGAVGQGGLLYARVPDIKGVLHVVWGDNSVQRCQLAYSVNQQTSRNLCK
>NZ_CP046445.1|WP_156264671.1|4178917_4179937_+|fimbrial-protein
MKREMILGLSVFLYLGYIHTILACVMTSGKTIEYSVNLGNKYFTVDVLNRQPGDLLFTYGGMTLTNNTEWNITCSGSEPSGYNSIGGAPVGPAYQSKPGYVYSIDRLPGIGYSFQMGEQDGIDFDSLFMPYPTARPFSGGRYFNSESKKPTIYFWRIPDTSGLPPPGQYCLNDYLGDIYLEGVNALKFSVKGLCITVKSPTCKISNADIKVNLGRHNRSVFMGPGSTTNMVPFNIDLTTCENVGNIFMQFNATADGNHAANGIIKIDDSGDDSSATGVGVQVLKNSVPIVLNEPATIWSGSKGSESAYSFQYQARYIQTESTVTAGQANASATFVVTYN
>NZ_CP046445.1|WP_142489628.1|4180223_4180775_+|hypothetical-protein
MLLVISGSGYFDLGFDSYFSRVKCRTTCTEKILYCSFEDPKAIVSNVMAASEKYYLRCLVIDYPWSNIAVLQSALYIKIHFPLISVVVYSTGGYRFNELEASYLEILGAQLNVGFSGVCSALMQRRMPVSAVDIIYAAASRFVEISKKDALLISFILAGLKLKDIASAYNKDIKQVYYDRAGF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

959223 : 1012447

Enterobacteria_phage(24.56%)

terminase,coat,portal,holin,integrase,lysis

attL 990221:990237|attR 1016305:1016321

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156262965.1\|959223_960387_-\|integrase	tyrosine-type recombinase/integrase	F1C5B2	Cronobacter_phage	2.2e-214	93.2
WP_156238534.1\|960623_960788_-	hypothetical protein	NA	NA	NA	NA
WP_156262966.1\|960898_961144_-	hypothetical protein	G8C7S3	Escherichia_phage	5.7e-32	86.2
WP_156262967.1\|961140_961380_-	DUF4222 domain-containing protein	M1FPC8	Enterobacteria_phage	1.2e-23	69.2
WP_156262968.1\|961357_961684_-	DUF2591 domain-containing protein	G0ZNC2	Cronobacter_phage	1.7e-31	64.7
WP_156265044.1\|961683_961893_-	hypothetical protein	A0A0F6TK62	Escherichia_coli_O157_typing_phage	9.4e-28	82.6
WP_156262969.1\|961901_962123_-	TraR/DksA family transcriptional regulator	A0A2I7S9S9	Vibrio_phage	3.1e-05	39.7
WP_156262970.1\|962402_962762_-	DUF2591 domain-containing protein	J7I4M3	Pseudomonas_phage	8.1e-11	35.3
WP_156262971.1\|962758_963310_-	phage N-6-adenine-methyltransferase	E5AGF8	Erwinia_phage	5.3e-54	57.8
WP_156262972.1\|963306_963486_-	hypothetical protein	G8C7S7	Escherichia_phage	4.6e-15	72.5
WP_156265046.1\|963756_964359_-	hypothetical protein	A0A0M4RD07	Salmonella_phage	2.7e-59	57.9
WP_156262973.1\|964358_965180_-	exonuclease VIII	A0A0M5M5Y6	Salmonella_phage	1.9e-119	76.6
WP_156262974.1\|965193_965478_-	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.8e-43	87.2
WP_156262975.1\|965549_965732_-	DUF551 domain-containing protein	A0A0N7CAQ5	Salmonella_phage	9.7e-05	41.2
WP_114387872.1\|965718_965877_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_156262976.1\|966028_966277_-	hypothetical protein	NA	NA	NA	NA
WP_156262977.1\|966433_966628_-	hypothetical protein	NA	NA	NA	NA
WP_156262978.1\|966665_966878_-	hypothetical protein	NA	NA	NA	NA
WP_156262979.1\|967748_967946_+	hypothetical protein	G8C7T7	Escherichia_phage	8.3e-10	46.9
WP_156262980.1\|968077_968854_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_136779982.1\|968841_969384_-	hypothetical protein	NA	NA	NA	NA
WP_156265048.1\|969490_970186_-	helix-turn-helix domain-containing protein	G8C7U1	Escherichia_phage	3.6e-100	80.7
WP_156262981.1\|970296_970512_+	transcriptional regulator	Q76H55	Enterobacteria_phage	1.9e-23	73.2
WP_156262982.1\|970617_971157_+	regulator	K7PJT7	Enterobacteria_phage	4.4e-69	73.7
WP_156262983.1\|971401_972235_+	DNA replication protein	A0A1R3Y5R9	Salmonella_virus	1.2e-92	67.2
WP_156262984.1\|972231_973596_+	AAA family ATPase	A0A1V0E5J4	Salmonella_phage	3.3e-198	77.3
WP_156262985.1\|973592_973913_+	hypothetical protein	NA	NA	NA	NA
WP_156262986.1\|975163_975409_+	hypothetical protein	A0A0M3ULJ3	Salmonella_phage	1.4e-38	87.7
WP_156262987.1\|975412_976138_+	hypothetical protein	G8C7V0	Escherichia_phage	1.1e-22	41.1
WP_156262988.1\|976225_976408_+	Eag protein	K7PL40	Enterobacteria_phage	8.8e-14	64.7
WP_156262989.1\|976585_977023_+	recombination protein NinB	Q5G8S5	Enterobacteria_phage	5.7e-43	59.2
WP_156262990.1\|977015_977186_+	NinE family protein	G8C7V4	Escherichia_phage	1.4e-16	75.0
WP_156262991.1\|977178_977778_+	recombination protein NinG	A0A1P8DTE0	Proteus_phage	9.9e-70	71.6
WP_156262992.1\|977774_977897_+	hypothetical protein	NA	NA	NA	NA
WP_156262993.1\|977893_978472_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.5e-46	55.0
WP_039031998.1\|978863_979088_+\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	5.5e-26	78.4
WP_156262994.1\|979065_979560_+	glycoside hydrolase family protein	M9P0E5	Enterobacteria_phage	7.6e-84	89.6
WP_156262995.1\|979556_980018_+\|lysis	lysis protein	M9NYX9	Enterobacteria_phage	2.2e-53	72.5
WP_139564917.1\|980203_980728_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	1.6e-71	75.7
WP_156265051.1\|980828_981071_+	DUF2560 family protein	A0A192Y6S9	Salmonella_phage	6.9e-22	69.6
WP_156262996.1\|981331_981850_+	hypothetical protein	C6ZR73	Salmonella_phage	6.4e-25	66.7
WP_156262997.1\|981905_982394_+	DNA-packaging protein	G8EYI7	Enterobacteria_phage	1.1e-82	91.4
WP_156262998.1\|982371_983871_+\|terminase	terminase	A0A2D1GLW6	Escherichia_phage	1.2e-281	90.1
WP_156262999.1\|983870_986048_+\|portal	portal protein	A0A2H4FNE2	Salmonella_phage	0.0e+00	85.8
WP_156263000.1\|986061_986976_+	scaffolding protein	A0A192Y6T4	Salmonella_phage	1.4e-120	77.6
WP_156263001.1\|986975_988265_+\|coat	coat protein	A0A192Y6V4	Salmonella_phage	4.9e-207	83.9
WP_156263002.1\|988315_988570_+	hypothetical protein	A0A2D1GLK1	Escherichia_phage	4.5e-16	70.0
WP_156265054.1\|988553_989057_+	hypothetical protein	I1TEJ0	Salmonella_phage	4.0e-72	80.8
WP_156263003.1\|989016_990435_+	hypothetical protein	I1TEJ1	Salmonella_phage	1.2e-230	81.6
990221:990237	attL	NA	NA	NA	NA
WP_156263004.1\|990434_991196_+	hypothetical protein	Q9AYZ3	Salmonella_phage	2.9e-34	38.6
WP_156263005.1\|991195_991675_+	DUF2824 family protein	Q2A0B3	Sodalis_phage	1.6e-62	73.4
WP_156263006.1\|991649_992309_+	DNA transfer protein	G5DA80	Enterobacteria_phage	2.0e-39	69.5
WP_156263007.1\|992318_993656_+	acyltransferase	Q716G3	Shigella_phage	3.1e-132	63.1
WP_156263008.1\|996091_996310_-	hypothetical protein	NA	NA	NA	NA
WP_156263009.1\|996454_996742_+	hypothetical protein	Q76H12	Enterobacteria_phage	2.5e-23	52.5
WP_156265056.1\|996781_997036_-	Arc family DNA-binding protein	Q76H48	Enterobacteria_phage	1.4e-20	63.3
WP_156263010.1\|997168_999241_+	hypothetical protein	Q716G1	Shigella_phage	5.5e-51	56.2
WP_156263011.1\|999325_999565_+	hypothetical protein	K7P7N3	Enterobacteria_phage	2.0e-26	68.4
WP_156263012.1\|999564_999882_+	hypothetical protein	K7PGV5	Enterobacterial_phage	2.6e-21	51.0
WP_156263013.1\|1000215_1001430_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.2e-129	55.4
WP_156263014.1\|1001575_1001896_+	hypothetical protein	NA	NA	NA	NA
WP_156263015.1\|1001913_1002372_+	hypothetical protein	NA	NA	NA	NA
WP_071681646.1\|1002621_1002819_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	8.6e-07	43.4
WP_156263016.1\|1002818_1003280_+	hypothetical protein	NA	NA	NA	NA
WP_156263017.1\|1003293_1004016_+	hypothetical protein	NA	NA	NA	NA
WP_156263018.1\|1004005_1004572_+	antirepressor protein	A0A1W6JPH8	Morganella_phage	8.2e-50	62.2
WP_156265058.1\|1004929_1005124_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA
WP_156265060.1\|1005116_1005311_+	hypothetical protein	NA	NA	NA	NA
WP_156263019.1\|1005307_1005571_+\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
WP_156263020.1\|1005567_1005789_+	hypothetical protein	NA	NA	NA	NA
WP_156265062.1\|1005839_1006400_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	5.4e-46	49.7
WP_156263021.1\|1006410_1006755_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	4.5e-35	65.5
WP_156263022.1\|1006711_1009528_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	9.0e-198	41.9
WP_156263023.1\|1009718_1010168_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_156263024.1\|1010177_1010657_+	proQ/FINO family protein	NA	NA	NA	NA
WP_156263025.1\|1010640_1011630_+	helix-turn-helix domain-containing protein	F1C596	Cronobacter_phage	2.4e-73	52.1
WP_156263026.1\|1011622_1011925_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_156263027.1\|1012069_1012447_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	2.0e-20	41.8
1016305:1016321	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1933495 : 2015934

Shigella_phage(26.83%)

tail,plate,portal,transposase,capsid,tRNA,head,protease,integrase

attL 1954382:1954399|attR 2021159:2021176

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156263482.1\|1933495_1933987_+\|transposase	transposase	NA	NA	NA	NA
WP_156263483.1\|1934080_1935202_-	cupin domain-containing protein	NA	NA	NA	NA
WP_142489113.1\|1935291_1936755_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_032617646.1\|1936755_1937427_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_142489114.1\|1937550_1938921_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.9e-108	45.5
WP_142489115.1\|1938940_1939570_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_142489116.1\|1939597_1940707_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_156263484.1\|1940748_1941222_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_156263485.1\|1941214_1941886_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_142489119.1\|1942003_1943254_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.7e-21	94.4
WP_156263486.1\|1943371_1946452_-\|integrase	tyrosine-type recombinase/integrase	K7P6V4	Enterobacteria_phage	1.5e-190	54.8
WP_156263487.1\|1946589_1946919_-	transcriptional regulator	NA	NA	NA	NA
WP_156263488.1\|1946934_1947270_-	hypothetical protein	NA	NA	NA	NA
WP_156263489.1\|1947435_1947618_-	DUF1482 family protein	NA	NA	NA	NA
WP_156263490.1\|1948019_1948427_-	helix-turn-helix domain-containing protein	K7PH19	Enterobacteria_phage	7.0e-19	64.9
WP_156263491.1\|1948472_1948877_+	helix-turn-helix domain-containing protein	K7PMD5	Enterobacterial_phage	5.7e-05	64.1
WP_156263492.1\|1948722_1949334_+	replication protein	A0A0U2JGJ0	Escherichia_phage	2.7e-67	77.5
WP_156263493.1\|1949349_1949769_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_156263494.1\|1950394_1951621_+\|portal	phage portal protein	Q8SBI0	Shigella_phage	6.0e-223	91.2
WP_156263495.1\|1951613_1952213_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	1.4e-87	79.0
WP_156263496.1\|1952222_1953443_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	8.2e-164	74.1
WP_156263497.1\|1953484_1953727_+	hypothetical protein	U5P4H6	Shigella_phage	3.1e-30	79.2
WP_156263498.1\|1953735_1953918_+	DUF2635 domain-containing protein	Q8SBH3	Shigella_phage	3.5e-10	68.9
WP_156263499.1\|1953914_1955411_+\|tail	phage tail protein	U5P0H3	Shigella_phage	5.3e-213	75.1
1954382:1954399	attL	NA	NA	NA	NA
WP_156263500.1\|1955410_1955767_+\|tail	phage tail protein	U5P076	Shigella_phage	8.2e-56	87.3
WP_156263501.1\|1955766_1956036_+\|tail	phage tail assembly protein	M1FPE4	Enterobacteria_phage	1.3e-34	76.4
WP_156263502.1\|1956177_1958004_+\|tail	phage tail tape measure protein	Q8SBG9	Shigella_phage	8.1e-224	73.2
WP_156263503.1\|1958060_1958489_+	PH domain-containing protein	A0A249Y2R5	Serratia_phage	1.9e-19	40.9
WP_156263504.1\|1958537_1959959_+	DNA circularization protein	M1FPN5	Enterobacteria_phage	2.2e-168	68.3
WP_156263505.1\|1959967_1961497_+	hypothetical protein	A0A0E3M194	Enterobacteria_phage	8.5e-17	55.7
WP_156263506.1\|1961496_1961781_+	hypothetical protein	NA	NA	NA	NA
WP_156263507.1\|1961783_1962854_+\|plate	baseplate protein	U5P0H6	Shigella_phage	5.5e-172	82.7
WP_156263508.1\|1962853_1963396_+\|plate	phage baseplate assembly protein V	U5P081	Shigella_phage	3.0e-65	68.7
WP_156263509.1\|1963398_1963818_+\|tail	phage tail protein	U5P0R9	Shigella_phage	1.4e-59	79.9
WP_156263510.1\|1963810_1964863_+\|plate	phage baseplate protein	M1FQW3	Enterobacteria_phage	7.3e-161	77.8
WP_156263511.1\|1964853_1965435_+	DUF2313 domain-containing protein	O22003	Shigella_phage	2.4e-89	78.8
WP_156263512.1\|1965985_1966417_+\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.4e-38	54.2
WP_156263513.1\|1966575_1968471_-	acyltransferase family protein	A0A193GZ69	Enterobacter_phage	3.3e-79	44.3
WP_156263514.1\|1968665_1969649_+	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-56	40.8
WP_156263515.1\|1970260_1970452_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.2e-21	92.6
WP_156263516.1\|1970573_1971896_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_156263517.1\|1971923_1973903_-	acyltransferase family protein	A0A193GZ69	Enterobacter_phage	1.8e-59	42.7
WP_156263518.1\|1974054_1974318_+	hypothetical protein	NA	NA	NA	NA
WP_142489122.1\|1974353_1974446_-	stress response membrane protein YncL	NA	NA	NA	NA
WP_106993575.1\|1974809_1975058_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_032617670.1\|1975185_1975284_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_156263519.1\|1975328_1976357_-	diguanylate cyclase	G3MA91	Bacillus_virus	1.3e-13	29.4
WP_156263520.1\|1976477_1976759_+	hypothetical protein	NA	NA	NA	NA
WP_156265098.1\|1977241_1978369_-	diguanylate cyclase	I4AZM6	Saccharomonospora_phage	4.9e-30	33.7
WP_096147877.1\|1978467_1979587_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8
WP_039032651.1\|1980230_1980461_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_156263521.1\|1980457_1980877_+	PIN domain-containing protein	NA	NA	NA	NA
WP_156263522.1\|1981338_1981689_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	1.3e-18	59.3
WP_156263523.1\|1981842_1982274_-	copper-binding protein	NA	NA	NA	NA
WP_156263524.1\|1982513_1983989_-	heavy metal sensor histidine kinase	W8CYF6	Bacillus_phage	7.4e-26	28.9
WP_156263525.1\|1983978_1984662_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.7e-31	36.0
WP_156263526.1\|1984851_1986237_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_156263527.1\|1986265_1986619_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_156263528.1\|1986728_1988012_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_156263529.1\|1988022_1991169_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	NA	NA
WP_156263530.1\|1991254_1991695_+	hypothetical protein	NA	NA	NA	NA
WP_156263531.1\|1991822_1994264_+	Ag(+)-translocating P-type ATPase SilP	E4ZFI9	Streptococcus_phage	1.1e-85	36.0
WP_156263532.1\|1994306_1994495_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_156263533.1\|1994528_1995266_-	peptidoglycan DD-metalloendopeptidase family protein	A8ATH6	Listeria_phage	1.1e-14	43.0
WP_156263534.1\|1995723_1997541_+	multicopper oxidase PcoA	NA	NA	NA	NA
WP_156265102.1\|1997540_1998437_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_156263535.1\|1998476_1998857_+	copper homeostasis periplasmic binding protein CopC	NA	NA	NA	NA
WP_156263536.1\|1998861_1999791_+	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_156263537.1\|1999845_2000526_+	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	8.7e-30	34.1
WP_156263538.1\|2000522_2001923_+	heavy metal sensor histidine kinase	W8CYF6	Bacillus_phage	3.4e-20	28.1
WP_156263539.1\|2002139_2002574_+	copper-binding protein	NA	NA	NA	NA
WP_156263540.1\|2002831_2003941_-	nickel/cobalt efflux transporter RcnA	NA	NA	NA	NA
WP_000019951.1\|2004062_2004335_+	Ni(II)/Co(II)-binding transcriptional repressor RcnR	NA	NA	NA	NA
WP_156263541.1\|2004558_2004882_+	hypothetical protein	NA	NA	NA	NA
WP_156263542.1\|2004968_2005400_+	hypothetical protein	NA	NA	NA	NA
WP_156263543.1\|2006782_2008636_+	AAA family ATPase	NA	NA	NA	NA
WP_156263544.1\|2008632_2010348_+	AAA family ATPase	S5M596	Bacillus_phage	1.9e-09	28.9
WP_156263545.1\|2010523_2010901_-	hypothetical protein	NA	NA	NA	NA
WP_156263546.1\|2010921_2012832_-	hypothetical protein	A0A2H4J185	uncultured_Caudovirales_phage	4.7e-41	26.6
WP_156263547.1\|2012828_2014736_-	hypothetical protein	NA	NA	NA	NA
WP_156263548.1\|2014728_2015934_-\|integrase	integrase	A0A2H4J165	uncultured_Caudovirales_phage	3.2e-43	30.3
2021159:2021176	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2077528 : 2124675

Enterobacteria_phage(28.0%)

terminase,tail,transposase,tRNA,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_142489179.1\|2077528_2079457_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	6.7e-128	36.9
WP_023616141.1\|2079460_2080003_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	2.8e-15	32.9
WP_003030583.1\|2080099_2080297_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_032617738.1\|2080347_2080704_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_001386830.1\|2080826_2080871_+\|tRNA	phenylalanyl--tRNA ligase operon leader peptide	NA	NA	NA	NA
WP_106993635.1\|2080985_2081969_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	9.9e-35	43.2
WP_156263584.1\|2081984_2084372_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_006820203.1\|2084376_2084676_+	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	7.2e-13	40.0
WP_156263585.1\|2084777_2085758_+	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_142489182.1\|2085794_2086346_+	glutathione peroxidase	NA	NA	NA	NA
WP_142489183.1\|2086345_2087101_+	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A285PWH2	Cedratvirus	1.2e-08	30.3
WP_142489184.1\|2087172_2087637_+	endopeptidase	S5MM68	Bacillus_phage	9.5e-12	33.8
WP_156263586.1\|2087925_2088639_+	EAL domain-containing protein	NA	NA	NA	NA
WP_142489186.1\|2088700_2090143_+	YdiU family protein	A0A075BSJ0	Microcystis_phage	4.8e-54	36.7
WP_142489187.1\|2090139_2090919_-	heme ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-09	25.0
WP_156263587.1\|2090911_2091904_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_142489189.1\|2091903_2092725_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_156263588.1\|2092721_2093750_-	hematinate-forming heme oxygenase ChuS	NA	NA	NA	NA
WP_156263589.1\|2093798_2095784_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA
WP_106993881.1\|2095853_2096048_-	hemin uptake protein HemP	NA	NA	NA	NA
WP_156263590.1\|2096249_2097296_-	3-deoxy-7-phosphoheptulonate synthase AroH	S4W5F1	Pandoravirus	1.5e-81	46.8
WP_156263591.1\|2097450_2098284_-	pyruvate, phosphate dikinase/phosphoenolpyruvate synthase regulator	NA	NA	NA	NA
WP_156263592.1\|2098622_2101001_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	3.0e-170	36.6
WP_156263593.1\|2102327_2102807_+	hypothetical protein	NA	NA	NA	NA
WP_156263594.1\|2102803_2103220_+	hypothetical protein	NA	NA	NA	NA
WP_156263595.1\|2103223_2103589_+	hypothetical protein	NA	NA	NA	NA
WP_142489195.1\|2104225_2105338_-	AI-2E family transporter YdiK	NA	NA	NA	NA
WP_156263596.1\|2105545_2108602_+	FAD-binding protein	NA	NA	NA	NA
WP_106993653.1\|2108598_2109009_+	1,4-dihydroxy-2-naphthoyl-CoA hydrolase	NA	NA	NA	NA
WP_156263597.1\|2109526_2110813_-	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	4.4e-115	50.1
WP_156263598.1\|2110812_2111028_-	hypothetical protein	A0A0U2RY08	Escherichia_phage	4.8e-19	53.5
WP_156265108.1\|2111094_2111904_-	hypothetical protein	K7PLW7	Enterobacteria_phage	1.1e-55	55.2
WP_089518920.1\|2112460_2113608_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0
WP_103179202.1\|2114554_2114878_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_117385354.1\|2115396_2115636_+\|lysis	lysis protein	A0A2H4JCI1	uncultured_Caudovirales_phage	8.6e-17	56.6
WP_156263599.1\|2115636_2116140_+	glycoside hydrolase family protein	A0A2H4JCH1	uncultured_Caudovirales_phage	5.0e-75	77.2
WP_156263600.1\|2116129_2116495_+	hypothetical protein	R9TPM9	Aeromonas_phage	3.9e-13	44.2
WP_156263601.1\|2116650_2116851_-	glycogen synthesis protein GlgS	NA	NA	NA	NA
WP_156263602.1\|2117076_2117325_-	hypothetical protein	NA	NA	NA	NA
WP_156263603.1\|2117570_2117774_+	hypothetical protein	A0A1W6JPG4	Morganella_phage	1.9e-12	52.3
WP_156263604.1\|2118210_2118756_+\|terminase	terminase small subunit	K7P7G0	Enterobacteria_phage	1.3e-92	96.1
WP_156263605.1\|2121052_2121466_+	DNA-packaging protein	E4WL26	Enterobacteria_phage	3.3e-24	54.3
WP_156263606.1\|2121477_2121873_+\|tail	phage tail protein	K7P6U9	Enterobacteria_phage	1.6e-44	77.1
WP_156263607.1\|2122200_2122539_+\|tail	phage tail protein	E4WL34	Enterobacteria_phage	6.2e-53	84.8
WP_156263608.1\|2122596_2123334_+\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	6.6e-124	83.7
WP_156263609.1\|2123336_2124083_+	peptidase P60	M9NZD8	Enterobacteria_phage	5.5e-110	74.1
WP_156263610.1\|2124060_2124675_+\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	9.4e-76	70.2

DBSCAN-SWA_4

2939403 : 2960919

Enterobacteria_phage(38.89%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156264059.1\|2939403_2940153_-	hypothetical protein	K7PGY2	Enterobacteria_phage	2.1e-77	64.7
WP_156264060.1\|2940162_2940465_-	hypothetical protein	NA	NA	NA	NA
WP_156264061.1\|2940464_2942123_-	hypothetical protein	A0A0E3M194	Enterobacteria_phage	8.6e-23	28.0
WP_156264062.1\|2942280_2947254_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	1.7e-13	35.5
WP_156264063.1\|2947304_2947838_-	hypothetical protein	NA	NA	NA	NA
WP_156264064.1\|2947908_2948511_-\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	2.4e-76	75.2
WP_156264065.1\|2948558_2948894_-	hypothetical protein	NA	NA	NA	NA
WP_156264066.1\|2948927_2949638_-	peptidase P60	K7PGV2	Enterobacterial_phage	3.8e-129	84.7
WP_156264067.1\|2949639_2950398_-\|tail	phage minor tail protein L	G8C7J7	Escherichia_phage	1.2e-136	91.3
WP_156264068.1\|2950394_2950733_-\|tail	phage tail protein	K7PHJ6	Enterobacteria_phage	7.0e-57	90.2
WP_156264069.1\|2950832_2951711_-	DNA primase	F1C597	Cronobacter_phage	5.6e-146	84.4
WP_156264070.1\|2951707_2953327_-	DEAD/DEAH box helicase	F1C598	Cronobacter_phage	1.6e-276	86.5
WP_156265150.1\|2953753_2954020_-	hypothetical protein	A0A286S2B5	Klebsiella_phage	1.3e-29	78.0
WP_156264071.1\|2954048_2954276_-	transcriptional regulator	NA	NA	NA	NA
WP_156264072.1\|2954380_2955154_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	9.5e-33	45.2
WP_156264073.1\|2955322_2955520_+	hypothetical protein	NA	NA	NA	NA
WP_156264074.1\|2955699_2955924_+	hypothetical protein	NA	NA	NA	NA
WP_156264075.1\|2955924_2956305_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.3e-38	68.4
WP_156264076.1\|2956282_2956504_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	2.0e-20	74.2
WP_156264077.1\|2956496_2956709_+	hypothetical protein	Q8W652	Enterobacteria_phage	5.3e-10	48.3
WP_156264078.1\|2956970_2957333_+	hypothetical protein	NA	NA	NA	NA
WP_156264079.1\|2957325_2957571_+	excisionase	Q8W657	Enterobacteria_phage	1.2e-34	84.2
WP_156264080.1\|2957626_2958940_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	8.4e-223	86.5
WP_156264081.1\|2958918_2959692_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	7.7e-59	81.1
WP_138369354.1\|2959742_2960138_+	hypothetical protein	NA	NA	NA	NA
WP_142486228.1\|2960178_2960919_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	1.4e-25	31.7

DBSCAN-SWA_5

3019419 : 3043125

Enterobacterial_phage(20.0%)

terminase,portal,capsid,head,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156264109.1\|3019419_3020901_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.3e-11	27.2
WP_156264110.1\|3020893_3021874_+	ABC transporter permease	NA	NA	NA	NA
WP_156264111.1\|3021870_3022836_+	ABC transporter permease	NA	NA	NA	NA
WP_156264112.1\|3023265_3023586_-	hypothetical protein	K7PGV5	Enterobacterial_phage	5.0e-20	52.9
WP_156264113.1\|3023585_3023825_-	hypothetical protein	K7P7N3	Enterobacteria_phage	2.4e-27	72.2
WP_156264114.1\|3023908_3025999_-	hypothetical protein	A0A1B1W279	Salmonella_phage	4.4e-40	52.3
WP_156264115.1\|3026053_3027571_-	hypothetical protein	A0A286S259	Klebsiella_phage	1.3e-46	53.6
WP_156264116.1\|3027567_3027948_-	nitrite transporter	A0A286S2A6	Klebsiella_phage	2.6e-52	73.8
WP_156264117.1\|3027957_3028446_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	3.2e-58	71.2
WP_156264118.1\|3028442_3028913_-	hypothetical protein	A0A286S298	Klebsiella_phage	5.8e-49	60.4
WP_156264119.1\|3029694_3030021_-	hypothetical protein	K7PGU9	Enterobacterial_phage	2.0e-53	94.4
WP_156264120.1\|3030055_3031213_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	3.7e-206	96.9
WP_156264121.1\|3031215_3031893_-\|head,protease	HK97 family phage prohead protease	Q77W96	Enterobacteria_phage	7.9e-124	98.2
WP_156264122.1\|3031910_3033185_-\|portal	phage portal protein	F1C584	Cronobacter_phage	1.2e-245	98.3
WP_156264123.1\|3033184_3034699_-\|terminase	terminase large subunit	Q9MCT1	Enterobacteria_phage	6.8e-285	96.2
WP_063922244.1\|3034705_3035191_-	hypothetical protein	K7PGU7	Enterobacterial_phage	2.6e-76	92.5
WP_103856713.1\|3035341_3035542_-	hypothetical protein	A0A1P8DTB8	Proteus_phage	3.7e-13	58.3
WP_156264124.1\|3035541_3035883_-	HNH endonuclease	K7P7P4	Enterobacteria_phage	1.4e-60	95.6
WP_156264125.1\|3035879_3036470_-	hypothetical protein	K7P7D2	Enterobacteria_phage	5.8e-99	85.2
WP_156264126.1\|3036633_3036885_+	hypothetical protein	NA	NA	NA	NA
WP_156264127.1\|3036850_3037195_-	hypothetical protein	S4TNM6	Salmonella_phage	2.7e-11	40.4
WP_156264128.1\|3037206_3038664_-	glycosyltransferase family 2 protein	S4TSQ9	Salmonella_phage	8.8e-213	71.5
WP_156264129.1\|3039073_3040096_-	DUF968 domain-containing protein	K7PJS6	Enterobacterial_phage	2.6e-147	75.0
WP_156264130.1\|3040174_3040357_-	hypothetical protein	NA	NA	NA	NA
WP_156264131.1\|3040362_3041280_-	transcriptional regulator	K7PLZ7	Enterobacterial_phage	5.2e-62	86.5
WP_156264132.1\|3041236_3041449_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.9e-12	61.7
WP_156264133.1\|3041612_3042167_-	hypothetical protein	S5FXP0	Shigella_phage	1.7e-44	53.1
WP_156265153.1\|3042192_3042393_-	hypothetical protein	H9C161	Pectobacterium_phage	2.8e-13	61.0
WP_156264134.1\|3042492_3043125_+	helix-turn-helix domain-containing protein	A0A1W6JP50	Morganella_phage	5.9e-49	55.1

DBSCAN-SWA_6

3145570 : 3153164

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156264193.1\|3145570_3146674_-	aminotransferase class V-fold PLP-dependent enzyme	E5ES42	Bathycoccus_sp._RCC1105_virus	5.7e-39	30.7
WP_156264194.1\|3146750_3147158_-	WxcM-like domain-containing protein	NA	NA	NA	NA
WP_156264195.1\|3147154_3148024_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.4e-109	67.0
WP_156264196.1\|3148023_3149109_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.1e-98	53.1
WP_156264197.1\|3149480_3150377_-	GalU regulator GalF	A0A127AW70	Bacillus_phage	2.4e-43	41.2
WP_156264198.1\|3150587_3151583_-	NAD-dependent epimerase/dehydratase family protein	Q6VZT4	Canarypox_virus	2.6e-06	26.6
WP_156264199.1\|3151775_3153164_-	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	6.3e-19	33.2

DBSCAN-SWA_7

3604959 : 3690107

Enterobacteria_phage(28.3%)

terminase,tail,portal,capsid,transposase,tRNA,head,protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_142486745.1\|3604959_3606045_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_142486746.1\|3606252_3606672_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	1.6e-13	36.2
WP_142486747.1\|3606743_3607442_+	DTW domain-containing protein	NA	NA	NA	NA
WP_156264373.1\|3607477_3610141_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_142486749.1\|3610251_3611607_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_156265169.1\|3611650_3611974_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_156264374.1\|3611970_3613278_-	MFS transporter	Q6JIH2	Burkholderia_virus	5.9e-43	30.1
WP_142486751.1\|3613430_3613886_-	DUF4385 family protein	A0A0C5AAP9	Cyanophage	1.2e-35	50.7
WP_156264375.1\|3619471_3622045_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	1.6e-124	34.6
WP_156264376.1\|3622174_3622906_-	polyphenol oxidase	NA	NA	NA	NA
WP_156264377.1\|3622902_3623883_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_142486755.1\|3624013_3624751_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_142486756.1\|3625022_3625370_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_142486757.1\|3625636_3626797_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_142486758.1\|3626793_3627666_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_142486759.1\|3627726_3628848_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_142486760.1\|3628858_3629929_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.2e-89	51.5
WP_142486761.1\|3630142_3630517_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_156264378.1\|3630608_3631202_+	DUF4154 domain-containing protein	NA	NA	NA	NA
WP_142486763.1\|3631194_3632436_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_156264379.1\|3632429_3632912_+	OmpA family protein	NA	NA	NA	NA
WP_156264380.1\|3632916_3634284_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_156264381.1\|3634345_3634759_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|3634864_3635212_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_106994998.1\|3635253_3636021_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_059307374.1\|3636051_3636585_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|3636603_3636852_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_106994995.1\|3636986_3638348_-	signal recognition particle protein	NA	NA	NA	NA
WP_142486768.1\|3638514_3639306_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_142486769.1\|3639324_3640611_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_156264382.1\|3640664_3641258_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_077227861.1\|3641379_3642258_+	NAD(+) kinase	NA	NA	NA	NA
WP_142486771.1\|3642343_3644005_+	DNA repair protein RecN	NA	NA	NA	NA
WP_039030087.1\|3644156_3644498_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_156264383.1\|3644558_3644846_-	RnfH family protein	NA	NA	NA	NA
WP_142486773.1\|3644835_3645312_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_039030084.1\|3645429_3645912_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.0e-28	46.2
WP_156264384.1\|3646592_3647861_-	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	7.1e-211	83.4
WP_156264385.1\|3647862_3648282_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-33	57.3
WP_156265171.1\|3648391_3649516_-	hypothetical protein	K7PGY2	Enterobacteria_phage	1.0e-72	52.5
WP_156264386.1\|3650216_3655151_-	DUF1983 domain-containing protein	E4WL39	Enterobacteria_phage	7.7e-11	41.9
WP_156264387.1\|3655204_3655831_-\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	2.3e-77	72.6
WP_156264388.1\|3655808_3656555_-	peptidase P60	M9NZD8	Enterobacteria_phage	7.9e-109	73.7
WP_156264389.1\|3656557_3657295_-\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	1.5e-123	83.3
WP_156264390.1\|3657347_3657689_-\|tail	phage tail protein	E4WL34	Enterobacteria_phage	2.3e-31	58.2
WP_156264391.1\|3657697_3661219_-\|tail	phage tail tape measure protein	F1C575	Cronobacter_phage	1.7e-190	47.8
WP_156264392.1\|3661311_3661731_+	hypothetical protein	NA	NA	NA	NA
WP_156264393.1\|3661755_3662025_-	DUF4035 domain-containing protein	K7PLY6	Enterobacterial_phage	4.2e-20	57.5
WP_156264394.1\|3662048_3662444_-\|tail	phage tail protein	F1C576	Cronobacter_phage	2.0e-58	87.0
WP_156264395.1\|3662493_3662949_-\|tail	phage tail protein	A0A1W6JP06	Morganella_phage	1.2e-56	76.4
WP_156264396.1\|3663009_3663339_-	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	2.7e-21	46.9
WP_156264397.1\|3663335_3663785_-	hypothetical protein	Q9MCS9	Enterobacteria_phage	6.5e-66	86.6
WP_156264398.1\|3663781_3664123_-\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	8.8e-07	40.6
WP_156264399.1\|3664119_3664446_-\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.5e-27	53.7
WP_156264400.1\|3664455_3664641_-	hypothetical protein	K7PHI6	Enterobacteria_phage	6.4e-12	61.5
WP_032617624.1\|3664694_3665915_-\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	6.2e-204	91.4
WP_156264401.1\|3665927_3666773_-\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	8.1e-110	73.4
WP_156264402.1\|3666781_3668086_-\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	2.5e-227	89.9
WP_156264403.1\|3668085_3669816_-\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	1.9e-291	82.0
WP_114386283.1\|3669812_3670283_-\|terminase	phage terminase small subunit P27 family	A0A2D1GNP3	Pseudomonas_phage	7.8e-46	61.9
WP_032617619.1\|3670445_3670646_-	hypothetical protein	Q6UAR8	Klebsiella_phage	1.7e-10	89.4
WP_156264404.1\|3670642_3670993_-	HNH endonuclease	A0A1B5FP94	Escherichia_phage	3.5e-51	80.7
WP_105318584.1\|3671156_3672514_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.5e-76	51.9
WP_156264405.1\|3672767_3673625_-	hypothetical protein	NA	NA	NA	NA
WP_156264406.1\|3673892_3674243_-	hypothetical protein	R9TPM9	Aeromonas_phage	3.3e-09	37.2
WP_156264407.1\|3674239_3674854_-	glycoside hydrolase family 19 protein	Q8HA86	Salmonella_phage	7.2e-92	79.3
WP_156264408.1\|3674853_3675135_-\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	5.7e-20	48.4
WP_156264409.1\|3675121_3675508_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	8.6e-59	94.5
WP_156264410.1\|3676512_3677052_-	hypothetical protein	K7PKJ4	Enterobacteria_phage	1.3e-73	70.1
WP_156264411.1\|3677299_3678121_-	antitermination protein	K7P7B9	Enterobacteria_phage	1.3e-56	46.1
WP_156264412.1\|3678138_3679128_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	5.1e-132	66.6
WP_156264413.1\|3679135_3679933_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	5.1e-114	76.6
WP_156264414.1\|3680018_3680417_-	RusA family crossover junction endodeoxyribonuclease	K7PKN5	Enterobacterial_phage	3.7e-57	84.8
WP_156264415.1\|3680413_3680662_-	hypothetical protein	NA	NA	NA	NA
WP_156264416.1\|3680671_3681550_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.3e-123	70.2
WP_156264417.1\|3681546_3682320_-	helix-turn-helix domain-containing protein	A0A291AWW0	Escherichia_phage	4.1e-60	59.3
WP_156264418.1\|3682273_3682492_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	5.1e-16	70.2
WP_156264419.1\|3682655_3683210_-	DNA-binding protein	A0A1C9II13	Salmonella_phage	4.7e-66	66.3
WP_155167032.1\|3683238_3683436_-	hypothetical protein	H9C161	Pectobacterium_phage	2.0e-16	65.0
WP_103822579.1\|3683540_3684188_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	2.4e-74	63.0
WP_114316997.1\|3684640_3685012_+	hypothetical protein	Q8HAA1	Salmonella_phage	1.2e-44	71.5
WP_156264420.1\|3685042_3685867_+	DUF2303 family protein	A0A0P0ZBZ4	Stx2-converting_phage	2.5e-103	68.2
WP_156264421.1\|3685999_3686536_+	HD family hydrolase	A0A192Y8M4	Salmonella_phage	7.0e-67	71.3
WP_156264422.1\|3686741_3687572_+	DNA adenine methylase	Q5QF26	Pseudomonas_virus	1.4e-69	50.4
WP_156264423.1\|3687568_3688312_+	hypothetical protein	Q858C8	Salmonella_phage	3.1e-12	55.6
WP_156265173.1\|3688325_3688655_+	hypothetical protein	K7P7P8	Enterobacteria_phage	2.4e-41	80.6
WP_156264424.1\|3688916_3690107_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	9.5e-149	67.6

DBSCAN-SWA_8

3792830 : 3799132

Lactobacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156264479.1\|3792830_3793091_+	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	3.8e-10	39.7
WP_156264480.1\|3793087_3793498_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	1.1e-16	43.1
WP_156264481.1\|3793470_3795615_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	9.3e-195	47.9
WP_156264482.1\|3795624_3796584_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	7.0e-134	71.0
WP_142486849.1\|3796625_3797495_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	3.0e-51	42.9
WP_156264483.1\|3797814_3798672_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_106994905.1\|3798919_3799132_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	1.3e-24	80.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046445

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection