CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046514	Bifidobacterium longum strain JSRL02 chromosome, complete genome	8 crisprs	cas3,WYL,DEDDh,cas2,cas1,csb3,csb2gr5,cas7,casR	1	24	1	0

1. NZ_CP046514

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046514_1

• CRISPR_ID: NZ_CP046514_1
• CRISPR_location: 289664-289749
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_1

Consensus_repeat	Method
GACAGCTCCCGCCAGCGGGAGCACTT	CRISPRCasFinder

spacers of NZ_CP046514_1

>1.1|289690|34|NZ_CP046514|CRISPRCasFinder
ATTTGTAGGGAAATCCTCCAGTTCAAATCCGTTA

CRISPR arrays and Neighbor proteins around NZ_CP046514_1

CRISPR arrays

The CRISPR arrays of NZ_CP046514_1

>merge|NZ_CP046514|1|289664-289749|CRISPRCasFinder
GACAGCTCCCGCCAGCGGGAGCACTTATTTGTAGGGAAATCCTCCAGTTCAAATCCGTTAGACAGCTCCCGCCAGCGGGAGCCTTT

>NZ_CP046514|1|1|289664-289749|CRISPRCasFinder
GACAGCTCCCGCCAGCGGGAGCACTT	ATTTGTAGGGAAATCCTCCAGTTCAAATCCGTTA
GACAGCTCCCGCCAGCGGGAGCCTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_156624880.1|298205_300290_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_014485907.1|282713_283271_+|orotate-phosphoribosyltransferase	unknown	unknown	unknown
NZ_CP046514.1|WP_007054751.1|286501_288043_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl|CDD|234572
NZ_CP046514.1|WP_156624876.1|288068_289568_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl|CDD|235489
NZ_CP046514.1|WP_007057703.1|303394_304861_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173859
NZ_CP046514.1|WP_011068470.1|291459_293280_+|histidine-type-phosphatase	unknown	unknown	gnl|CDD|132717
NZ_CP046514.1|WP_007051535.1|283364_284213_+|RNA-methyltransferase	unknown	unknown	gnl|CDD|349969
NZ_CP046514.1|WP_007051527.1|293498_295112_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|235967
NZ_CP046514.1|WP_007056503.1|295317_297387_+|transcription-termination-factor-Rho	unknown	unknown	gnl|CDD|237171
NZ_CP046514.1|WP_011068473.1|286198_286498_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl|CDD|178810
NZ_CP046514.1|WP_007051538.1|280896_281178_+|metal-sensitive-transcriptional-regulator	unknown	unknown	gnl|CDD|224848
NZ_CP046514.1|WP_007051533.1|284647_285616_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_007051520.1|304982_305669_-|endonuclease-III	unknown	unknown	gnl|CDD|223255
NZ_CP046514.1|WP_003828150.1|290938_291253_+|DUF2469-domain-containing-protein	unknown	unknown	gnl|CDD|313765
NZ_CP046514.1|WP_156624873.1|278076_280785_-|HAD-IC-family-P-type-ATPase	unknown	unknown	gnl|CDD|319774
NZ_CP046514.1|WP_011068468.1|300515_303356_-|valine--tRNA-ligase	unknown	unknown	gnl|CDD|380147
NZ_CP046514.1|WP_007051524.1|297694_298084_+|chorismate-mutase	unknown	unknown	gnl|CDD|181719
NZ_CP046514.1|WP_013410393.1|277258_277993_+|aquaporin-family-protein	unknown	unknown	gnl|CDD|223653
NZ_CP046514.1|WP_007051537.1|281241_282645_+|DNA-recombination-protein-RmuC	unknown	unknown	gnl|CDD|376878
NZ_CP046514.1|WP_011068472.1|289890_290928_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379112

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_007054751.1|286501_288043_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl|CDD|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP046514.1|WP_156624876.1|288068_289568_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl|CDD|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP046514.1|WP_007057703.1|303394_304861_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173859	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP046514.1|WP_011068470.1|291459_293280_+|histidine-type-phosphatase	gnl|CDD|132717	cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction. Catalytic domain of HAP (histidine acid phosphatases) and phytases (myo-inositol hexakisphosphate phosphohydrolases). The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. Functions in this subgroup include roles in metabolism, signaling, or regulation, for example Escherichia coli glucose-1-phosphatase functions to scavenge glucose from glucose-1-phosphate and the signaling molecules inositol 1,3,4,5,6-pentakisphosphate (InsP5) and inositol hexakisphosphate (InsP6) are in vivo substrates for eukaryotic multiple inositol polyphosphate phosphatase 1 (Minpp1). Phytases scavenge phosphate from extracellular sources and are added to animal feed while prostatic acid phosphatase (PAP) has been used for many years as a serum marker for prostate cancer. Recently PAP has been shown in mouse models to suppress pain by functioning as an ecto-5prime-nucleotidase. In vivo it dephosphorylates extracellular adenosine monophosphate (AMP) generating adenosine,and leading to the activation of A1-adenosine receptors in dorsal spinal cord.	3.0389e-06
NZ_CP046514.1|WP_007051535.1|283364_284213_+|RNA-methyltransferase	gnl|CDD|349969	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU. RNA 2'-O ribose methyltransferase catalyzes the methyltransfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH group of ribose in tRNA or rRNA. It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	4.64827e-41
NZ_CP046514.1|WP_007051527.1|293498_295112_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|235967	PRK07208, PRK07208, hypothetical protein; Provisional.	0
NZ_CP046514.1|WP_007056503.1|295317_297387_+|transcription-termination-factor-Rho	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	0
NZ_CP046514.1|WP_011068473.1|286198_286498_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl|CDD|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	3.21183e-29
NZ_CP046514.1|WP_007051538.1|280896_281178_+|metal-sensitive-transcriptional-regulator	gnl|CDD|224848	COG1937, COG1937, Uncharacterized protein conserved in bacteria [Function unknown].	2.43596e-30
NZ_CP046514.1|WP_007051520.1|304982_305669_-|endonuclease-III	gnl|CDD|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	2.51632e-96
NZ_CP046514.1|WP_007051537.1|281241_282645_+|DNA-recombination-protein-RmuC	gnl|CDD|376878	pfam02646, RmuC, RmuC family. This family contains several bacterial RmuC DNA recombination proteins. The function of the RMUC protein is unknown but it is suspected that it is either a structural protein that protects DNA against nuclease action, or is itself involved in DNA cleavage at the regions of DNA secondary structures.	1.4062e-106
NZ_CP046514.1|WP_156624873.1|278076_280785_-|HAD-IC-family-P-type-ATPase	gnl|CDD|319774	cd02079, P-type_ATPase_HM, P-type heavy metal-transporting ATPase. Heavy metal-transporting ATPases (Type IB ATPases) transport heavy metal ions (Cu(+), Cu(2+), Zn(2+), Cd(2+), Co(2+), etc.) across biological membranes. These ATPases include mammalian copper-transporting ATPases, ATP7A and ATP7B, Bacillus subtilis CadA which transports cadmium, zinc and cobalt out of the cell, Bacillus subtilis ZosA/PfeT which transports copper, and perhaps also zinc and ferrous iron, Archaeoglobus fulgidus CopA and CopB, Staphylococcus aureus plasmid pI258 CadA, a cadmium-efflux ATPase, and Escherichia coli ZntA which is selective for Pb(2+), Zn(2+), and Cd(2+). The characteristic N-terminal heavy metal associated (HMA) domain of this group is essential for the binding of metal ions. This family belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	7.96423e-152
NZ_CP046514.1|WP_011068468.1|300515_303356_-|valine--tRNA-ligase	gnl|CDD|380147	NF000540, alt_ValS, valine--tRNA ligase.	0
NZ_CP046514.1|WP_007051524.1|297694_298084_+|chorismate-mutase	gnl|CDD|181719	PRK09239, PRK09239, chorismate mutase; Provisional.	9.5939e-49
NZ_CP046514.1|WP_013410393.1|277258_277993_+|aquaporin-family-protein	gnl|CDD|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	7.88559e-80
NZ_CP046514.1|WP_003828150.1|290938_291253_+|DUF2469-domain-containing-protein	gnl|CDD|313765	pfam10611, DUF2469, Protein of unknown function (DUF2469). Member proteins often found in Actinomycetes clustered with signal peptidase and/or RNAse-HII.	1.30549e-58
NZ_CP046514.1|WP_011068472.1|289890_290928_+|GNAT-family-N-acetyltransferase	gnl|CDD|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	8.65156e-13

Protein sequences

>NZ_CP046514.1|WP_156624876.1|288068_289568_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MAEKLMKYADATKKYDVVFGLETHVELSTNTKLFCPAHIEFGGEPNTELTPVSLGLPGSLPVINKTAVDYAIKLGLALHCEIAEWSQFARKNYFYPDMPRDYQISQYDKPTNGNGYLDVELEDGTVFRVPIERAHIEDDAGKNTHVGGADGRIEGADHSLVDYNRAGVPLIEIVTKPIEGAGDRAPEIAGAYVRAIRDIVRALNISHARMEQGNMRADVNVSLRPSPDAPYGTRSETKNVNSFRGIEKTIQYEIRRQAARLDDGKEILQETRHWDEATQTTAGGRLKSDADDYRYFPDPDLVMLHITKEHIEEMKAQMPEMPRERRNRLKSEWGLSDLQMRDILNADALDLIEETVKAGAKAAGARKWWLGELSREANAKGVSLEELPITPADVAEVEKLIASGKLNDKLAKQTVEGVLKGEGTPDEVVKKHDYKIVEDNGAIEAAVDAAFESNPDVVEKLKSGNMKPMGVIIGAVMKATRGQADAKAVTKVVMGKIKG
>NZ_CP046514.1|WP_007054751.1|286501_288043_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSNETATLVKLSAAEQAAAVKKGDVTSRELVEAHLKVIEAAEPSIKAFLKVSGDVALEQADAFDAKSAEDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGMPILGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSASAVAAFEAPIALGTDTGGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDKRDSTSIPEGPRPMVAAAREGAKRDLKGMKVGLIKELGGDGFQPGVEARFNEAVDKLKEMGAEVVEVSVPHIGYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYTREAGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIEDFKKAFEQVDVLVAPTSPSTAFKFGEKMDDPLAMYMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMYKPAAALEAALEDSWNGPIWNDLKTPWLDGLGK
>NZ_CP046514.1|WP_011068473.1|286198_286498_+|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MPTFSREEIVHLGDLARIALTDEEITRLQGELNVIADSINKVQEVASDDVPPTANPVPLEAYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE
>NZ_CP046514.1|WP_007051533.1|284647_285616_-|hypothetical-protein
MKHHKAVDILITKAEATQQCAYGTTKAHRSALARRVQARELKRVFPNMYAASEYWDSLQPDERIRHIARTLHNRHPDWVFAGVTAAAIHDFEHQWHLHAGTITLATTSRGPNASSAKVKRIFTSSSTPEYANGLPVTSKARTVVDCGLSVDFRFALPIIDSALRNGVAITDILNVCSTMRRDCTPIFRLLHYANPASENGGESLGRGTIIAGGLLAPELQQNITDPQTGALYRVDFLWRLPENRLIVGEFDGYEKYVNPDMNDRKGVRGAVQAEKERETALYRAKVDTIVRFTYEEVMQQHPLLNKLRAAGIPHAGTVMGAG
>NZ_CP046514.1|WP_007051535.1|283364_284213_+|RNA-methyltransferase
MHAPNQISLAAKASGEPEFREIGLGPWSETHPGEPRPDDPTSSNYDGRFDSVLLNDGDRRNVLDRYRYWTVAAIKADLDARGRHDFEVAVENWTHDFNIGSMVRTANAFQAKRVHIVGPHKWNRKGALMTELYQHVEHHPSIAELVESWHHRIAGEIAYERAKAGAAAIHAHDVAVDGDNKHLHELLAEIDACDARIKELQAARVIALDIIPGAVPMEAYAFPKRCLLLFGAEGPGLSEKALALADDVVYISQFGSVRSINAGAAAAVAMHAWIAQHAVSGV
>NZ_CP046514.1|WP_014485907.1|282713_283271_+|orotate-phosphoribosyltransferase
MLEPREQLATLLKEHVVGRPFSELAAVTFDHRAATVMGHVLIDALEDAGYSIDDFDAVGALTAASVPMVSAMIQAAASRGEDLDGFVMDFVYPSIKGPSIEGRRVVLLDAWLSEKSYVQTSSLVTLRNGNELSLDFGIVEQLGAKVVAIASLVGGGVKDINVVNPSTGDEQTLPFIQVFDESELR
>NZ_CP046514.1|WP_007051537.1|281241_282645_+|DNA-recombination-protein-RmuC
MIIVIVVLVVGAGLGLFAGFVLGRHKGQEMARGVKSEELEEAKTSLENARFENAELSARNAAAQAQIEGVNQQLAFAKSQLAQAQQAEQIRIQQERERAAAEAERKRQADAQAAEAKRAEQEARLKEQSKVLEALAPVAKNLDTLQNKVTQIEEGRKREMGALGAQLKGLNDQQARLDKETSSLSAALRNNKVRGAWGEAQLKNIVESAGLLEHVDFDTQVVVTDADGRTLRPDMIVHLPGGKTIPIDAKVPYADYQRACEIPDTASPEDIARRDDLLRSHAKALREHVRALGEKAYWNAFDVAPDFVVAFIPNEALLQAALEADPTLMDDAFSRKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKQLFDLSRELYERFSTLGDYAIKLGTQITKTVSAYNKFASSLERRVLPTARKLQKIEPTKIIEEVPIIESDKGNVSELSAPEVVPADEGDTHLTASGDSLES
>NZ_CP046514.1|WP_007051538.1|280896_281178_+|metal-sensitive-transcriptional-regulator
MHGYDEDKAKVIARLRRIEGQVRAITQMVEDDKYCIDILTQISASNSALKSVALLLLDDHLNHCVRQASIQGGEVADEKLAEASAAIARLVKS
>NZ_CP046514.1|WP_156624873.1|278076_280785_-|HAD-IC-family-P-type-ATPase
MELSIFSAATALIAAAALTWLVLRFFFGTQKATAGAMDASGERQSATITVKGGYSPAVISMRTGTPITLTFDRQETGECTSHVVFADLGLDAMLPGNATTDVELPALPAGEYPFACGMNMVHGLLRVEGEESKDGADKDGLRPRADGSAEAEGVSPSDLRVGAPVVDAAEAERREAAERANEIKALTKLVIVGAVLTLPVFAVTMLHMANPALVPHWMVNPWLQAILITPVMFYCGRPIHTVGFPALAHRSPDMNSLVSLGTSAAYLYSLVTCIAPWVFPEGSREPYFESVGVVITLVLVGRLLEAKAREGTGKAVQSLIRLRPRTAHKLNATSADNVDGIEWRNPAHFTDTDIDAIATGDLLVVKNGERVPTDGVIVAGEARIDESMITGESKPVSKTAGDPVTGATVLLKGGCVMRATQVGADTVLSQIAAMVARAQATKAPVQQLADKIARYFVPAVMIIAIWTFAIWVSLGPAPQLAHALVTAVSVLIIACPCALGLATPLSVTVSLGLGATNGVLVTSAKALEQARRIGTVVFDKTGTITRGVVDAAADWDKPSYEQDTVKEGSREAVAALRARGIRTVMLSGDKAEVAGRIAREVGIDTVICEVKPDGKAYWIAKLQRERDEAAAKSAYGTSRTAAQSRTLIAMVGDGINDAPALAQADLGIAIGTGTDVAMQSADVTLMSGDLRGVIKTINLSNATMRNIRENLGWAFGYNVIGIPVAAGVLYPFTGWLLSPMIAGLAMALSSVCLVLNANRLHGANINVGAADGPAGSGSSTADVESAGSAESANAADITGSATSNAPHEPTVIIDDRTTLNQTNHVSDQSNNPTNKENTMDTGMHMHHTAPADGETATDPVCGMTVAVNADAITREYEGKSYYFCGEHCATNFMKAPQVFLEQ
>NZ_CP046514.1|WP_013410393.1|277258_277993_+|aquaporin-family-protein
MDYPLFTKLAAEFFGTAILMIFGNGSVANVELKNTKGHHAGWLNIAMGYGFGVMFPVLMFGSVSGAHINPAMTIAQAVNGLFPWSDVLPYIVAQLLGALLGQLIVYITYYPHYKETEDAEAILGTFCTTDADNQKANYFLNEMFGTLVLVFGALCCLSLAWGKQDYAAASIVVGFIVWGLVTSMGGPTGPGLNPARDLMPRLLHAILPIPHKGSSRWGEAWIPVVAPIVGAIIGAWLFVFFFAS
>NZ_CP046514.1|WP_011068472.1|289890_290928_+|GNAT-family-N-acetyltransferase
MATEAQLKRDLPQSIVIPPIRGEMVHLRPATVEDLPRLDELDAFYGASKITGKDAVTERAIVHTWVRRSQAWEAGQAPAESGVGDPESRRTIAWAVLTDADHDDDGQLDAASTDNVIGMIFLIDIDGWSKSARIQIILGREYRGRGYSRDAMPRVMTYGFAPEPAGLGMHRIWVSVPEKNSRSISVYQSLGFVPSGTSRDALWDAENNKYQDLIVMDTLADEYDPIRSLDAFGMHLIEDNPGVKEALSAREHSIAIQQNKPEPEPAQRGEAAGATTSDVQSQAQTPAAAQPVEPQAEHHDDTQKNTRHSLEEESNWPYGQAERKPSKEAWWRTLGRGRKRDTESE
>NZ_CP046514.1|WP_003828150.1|290938_291253_+|DUF2469-domain-containing-protein
MSAEDLDNYETDAELALYREYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQLTDAWVWDVYRSSRFVKSVRIVTFKDVNVEEVQKTDIDIPDDIH
>NZ_CP046514.1|WP_011068470.1|291459_293280_+|histidine-type-phosphatase
MVAAATLLAGGILTVPHAMALEADGQYYSSKQPYVAPSEATTASYSQAPEGYETVYTESMARHGSRGLSSYKYDALLMKMAEAAEADNGFKSDAIKSEFMKNLKAITAANVENGYGMLTGQGADQHQGIGARAYERNKTLFDNAAKDGGKIAYQSSGEARATESGENFARGFNAASNNKLANSTVTPADPAGTGEAAAFDKTPNTLYFHKSENPDGTEKTGEAKQRADDYQNFVENDAIIAGAEQTIAENEDVKTASHDLLSQIFTDDFLAKLADGTYAWYNTVDGTKGGEANCAPGADPSKDADACGAAKKKIASEYDAAMDLYNLYIIAADMENENTGSHTFDFNQYFQGEQADDAKLFAWALDAEDFYEKGPSYAGQDETYTIAQPLLDDFFSSIDERVNGGSTVATFRFAHAETMMPFAALLGLPGSTQQAAASTTDVYTYANNEWRGESVTPMAANVQWDVAVKSGNDPKTGRAYTPLVRMLYNEQEIAFRSECTPIADGSTWYKLTELKSCLASDHQTLGDDAHLTDDSTTQPGTGPNTGEGTSTTPNNNGAGTHQPSNTQANGTENELSRTGVAVTGVAGIMMLLALAGISLNLWKVRR
>NZ_CP046514.1|WP_007051527.1|293498_295112_+|NAD(P)/FAD-dependent-oxidoreductase
MTDKQSVVIIGGGPAGLTAAWELIKDGGADKYDVTVLEGTREFGGISRTVKHNGNRMDIGGHRFFSKDERIMDWWKTVLPLQGAPSYDDKKLGRDHDMEPGGPDPETEDKVMLKRHRVSRIFWNRHFFDYPISLSPNTLKAMGFKLTMVAGFSYLKSMFHKLPEDNLENFYINRFGRKLYSMFFEGYTEKLWGRHPSQISADWGAQRVKGLSIMGVLKNAFQKLLPKKRSNAEVETSLIEEFWYPKYGPGQLWETVESNCEAAGVKVLTDARVVEVRQTDGAVSSVVYEDSEGNRTELSGDQFISSMPVKDLVNAIDAAGADPEAVDSKPAPADMTEVANGLPYRDFVTVGLLVKHLKLKNTTSIPTLGNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDDTVWIGLEYFCEEGDSFWNMSEEDVTKFAISELTRMRVINGPDEVIDSHRERVRKAYPAYFDTYEHMDELIEYLDGFGNLYCVGRNGQHRYNNMDHSMATAMEAVGNIKTGKTSKKNVWSVNTEKSYHEEK
>NZ_CP046514.1|WP_007056503.1|295317_297387_+|transcription-termination-factor-Rho
MANSQNLEDMKLPELKELAKQMGLRGTSTMRKPELLATLQAARNGGEPPAGVTVRAPKAAKTAKVVKAPQSDAAEANTTDNADVATQSPAPAPAATEPQLDLPLPVADDAKKDETEPRRTRRKAADDAASEPRAARRRRDDDQPDFARRKPRKKADEAGDLLATLDLGDAAPTERRRERHEDVEVPLIRRVRDDEDEQPRRRRRTAENSEETVRDLDDILATLPTQKHEETSEDGEQNDDHEFVRRNRRDRSDRNDRDTRNDRSDRRNRRMRGRDRDNADDDRRYDDRDNRSDRNDRDSRREEPQEDLVPVAGIVDVLDSYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGSIRAPREGDRRNQRQKFVPLQAIDSINGQSVEEALNRPQFSKLTPLYPQERLKQETAPNKLTGRIMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANSIAANNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPASDHTTVAELAVERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPAIDINASGTRREELITNPQELPIIYRLRRLLGGMEPEQAYQTLVPRLKKTATNRDFLAAIVQQANTGNAVNGN
>NZ_CP046514.1|WP_007051524.1|297694_298084_+|chorismate-mutase
MSETSSDWQRTTIDSAQAAAHPETAQAVARIKALRQTIDNIDSAVIALLAERFKATSQVGVLKANAGFAPEDTKREDYQIERLHRIAIDAGLDPEIAEMYREFVVTEAKKRHQRIADAGGDPGVLDVFA
>NZ_CP046514.1|WP_156624880.1|298205_300290_+|hypothetical-protein
MRCGAALVSCALCVASILGGAWMSRPTPVDYGPVLATASDMYAVTDAEGEPVRWYVVGKGGAGNGASADSGNSGSTDTDSANSNSGTSKVSRIPASAATLPWKVSVTYSLDGPNVEANEVAGASGLIGVYIDIKPQTKEANRTIPVVAFTVPTQVADDVSADNSITVTTQGSNTVVAAAGKAATGLEFSCYMNAKDFSMSSVALAVLPSNSSSPAVGANPDAANAANAAAQPAADTDVAQLTASAATLVDSLTDAGSGEQQQLIEQLQTLRDNERALNKSVVAERETAHKRTFEDYMAAYVGSYTTHLSGSIGTSTQLPALMGTAGELSGDTPLAQAVLDLANAVNNVSAAHQHAGAVDALDEVIRRIQQQGTTGLVDDLIAEASEEATQGSKQYADGQSQLSAAMIPYSMKYTDVYTANLSALTGGTSSGATAYESQAIAETNGSDELADAQSKVDAAMSTLATASEHTGKATALRQIVLRFSDQFEGGASSASGNDGDGSSGDVSSDPVTEAQALTGLVDSQSQSFYGKTRVAQAKRKADAARKQAKAAQQQQSQHSKASLVDDTMSMSAGDVMNYAGGLTSAIGGGDKSDSSKSAGSGTNDSAKSSDTGDSGNGKASNASDSGNNLDTAPVLFGFGTGGTLLKHDMNALINETVKISDAGTLLAQAVAQLDSPNMQQKTAETRYLIVIPTV
>NZ_CP046514.1|WP_011068468.1|300515_303356_-|valine--tRNA-ligase
MAHYRSIVRTSPANSLLGCLLYSSACHATCINFGLMTEGKSIINANLTPLPDKVGVDGLEDKWRTVWDEDGTYKFRNTRDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTERRVQNYYGVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLSIDWSQTYHTIGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTAVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQYVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWRDLKLPTRPIIQRNGRIVMDTPDWIEDPAGREVFAETAGKTTFSARKIIVDKLRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDAKLNAELIERGKELEFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNASGEPDYDHPITPSEDRLPIDPTIDVPEGYDESQRDVPGGFTAEKDIMDTWATSSLTPQIVTHWAEPDEASKALFASTFPMDLRPQGQDIIRTWLFSTVDRAHLENKCLPWAHATLSGWILDPDHKKMSKSKGNVVVPNEPIEKFGADAVRYWAAAARLGLDATYDIGQMKIGRRLAIKLLNATKFALAIGREDENHHVGAAAEAAWNPADVTEPLDRAAMAKLALVVRQATEALESYEHSKALEVIESYFWQFCDDYIELVKNRAYGTPDEHGNVPSEKAVKSARTALGLGLDAFARLLAPYLPYATEEVWSWMHAGSGSVHRAAWPVVDPYVEAATGASPELLTWAGKAVEQLRKIKSEAKVSMKTPILSVALSAASEGVEAIHAALGDIAQAGRVVGKFDLVAKHAEESAAEGTPETEVAVEASELGEPPAKKPKH
>NZ_CP046514.1|WP_007057703.1|303394_304861_-|ABC-transporter-substrate-binding-protein
MALGALVVVGWTFMQNRFQPGSSLDADVTIGIDDMPQSLDIRSDSSAAAERLLVDNVYETLVTVDQDNKLQPGLATSWKTSDDGLTVTLTLQSGVTFSNGHTLDASDAVWSLQQNVTNKVADVDELGDLASVANPNATTVVITLAKPNPTLLRALSGRLGIVYDSESSSADYQRKAIGSGPFTVADFQPGHSLKLARSDTYHGTKAASNVVEFMQYSDADALSKALTDGSLDMAAPVSASTATGLNGKDGLTVKEGATTDKVLLAYNNGTDSLLSDEQARKAFRYQIDAAGIASAQPDAAGALGGPISLLEPGYEDLTGLYPHDENQAGQMFSYFGAQYLTTVNLVVPEEYRSLAETIKQQIERQPRPTVNLEVLSDEDYAKRIKDGKWELTVMSMDGTDDAGIFADPDSMFHYDHTEAQQAYADARAATNDADYEARMKAYARLISEDAASDWLYTRKCFTVASTKVSGYPTSMINRRMPLAGLTVK
>NZ_CP046514.1|WP_007051520.1|304982_305669_-|endonuclease-III
MRETKSARLTRMHDEYDILRQVIPAPACALHFSNPLELLIATVLSAQTTDKRVNTVTPELFATYPTARDLAAANPAQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLGNAFDIPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDTCPSYAPPAGKSTSKR

Crispr_ID: NZ_CP046514_2

• CRISPR_ID: NZ_CP046514_2
• CRISPR_location: 330735-330813
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_2

Consensus_repeat	Method
CGCCGGGTGGCTTTTTCAATGCCCG	CRISPRCasFinder

spacers of NZ_CP046514_2

>2.1|330760|29|NZ_CP046514|CRISPRCasFinder
AAGACGGGCATCCAAGTTTTCAGCCACCC

CRISPR arrays and Neighbor proteins around NZ_CP046514_2

CRISPR arrays

The CRISPR arrays of NZ_CP046514_2

>merge|NZ_CP046514|2|330735-330813|CRISPRCasFinder
CGCCGGGTGGCTTTTTCAATGCCCGAAGACGGGCATCCAAGTTTTCAGCCACCCGCACGGGTGGCTTTTTCAATGCCCG

>NZ_CP046514|2|2|330735-330813|CRISPRCasFinder
CGCCGGGTGGCTTTTTCAATGCCCG	AAGACGGGCATCCAAGTTTTCAGCCACCC
GCACGGGTGGCTTTTTCAATGCCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_052789221.1|325752_326046_+|hypothetical-protein	unknown	unknown	gnl|CDD|372995
NZ_CP046514.1|WP_010081012.1|324177_324363_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_010081009.1|326235_326424_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein	unknown	unknown	gnl|CDD|375127
NZ_CP046514.1|WP_016462172.1|330842_331376_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618781.1|333448_333724_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_118240193.1|324528_325350_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618778.1|334759_335080_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618780.1|333720_334086_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein	unknown	unknown	gnl|CDD|377449
NZ_CP046514.1|WP_060618786.1|329290_330493_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein	unknown	unknown	gnl|CDD|286444
NZ_CP046514.1|WP_060618784.1|332326_332641_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618782.1|333101_333437_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156624901.1|326407_327841_+|terminase	unknown	unknown	gnl|CDD|273684
NZ_CP046514.1|WP_060618779.1|334117_334705_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618787.1|327840_329340_+|phage-portal-protein	unknown	unknown	gnl|CDD|377466
NZ_CP046514.1|WP_010081014.1|323722_323929_+|WhiB-family-transcriptional-regulator	unknown	unknown	gnl|CDD|376791
NZ_CP046514.1|WP_016462171.1|330450_330711_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_131272312.1|323950_324166_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_052789221.1|325752_326046_+|hypothetical-protein	gnl|CDD|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	0.00351344
NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein	gnl|CDD|286444	pfam09355, Phage_Gp19, Phage protein Gp19/Gp15/Gp42. This family of proteins are functionally uncharacterized. They are found in a variety of bacteriophage.	9.39276e-13
NZ_CP046514.1|WP_156624901.1|326407_327841_+|terminase	gnl|CDD|273684	TIGR01547, Uncharacterized_protein_YqaT, phage terminase, large subunit, PBSX family. This model detects members of a highly divergent family of the large subunit of phage terminase. All members are encoded by phage genomes or within prophage regions of bacterial genomes. This is a distinct family from pfam03354. [Mobile and extrachromosomal element functions, Prophage functions].	2.19106e-06
NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein	gnl|CDD|375127	pfam17318, DUF5361, Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	0.00120607
NZ_CP046514.1|WP_060618787.1|327840_329340_+|phage-portal-protein	gnl|CDD|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	5.13623e-23
NZ_CP046514.1|WP_010081014.1|323722_323929_+|WhiB-family-transcriptional-regulator	gnl|CDD|376791	pfam02467, Whib, Transcription factor WhiB. WhiB is a putative transcription factor in Actinobacteria, required for differentiation and sporulation.	6.782e-14
NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein	gnl|CDD|377449	pfam05065, Phage_capsid, Phage capsid family. Family of bacteriophage hypothetical proteins and capsid proteins.	6.24073e-14

Protein sequences

>NZ_CP046514.1|WP_016462171.1|330450_330711_+|hypothetical-protein
MATDSQCEAAYRRLRPYCDVLEEAEELDYGLAAGEQYYALSWLIAAILENHVTVPQEPLLDAFGLLEDEDKDEYASALDKELAQPT
>NZ_CP046514.1|WP_060618786.1|329290_330493_+|hypothetical-protein
MDSNSLPPSNLSPAQRKAFNSHLNDLWDDYQDELSDLIIEAKTMVPNSLYFGDDPTGQARLQLEDYARKANLIVQDYYRNVRAAWAEAAGITMPDYKEAQVSSDRAFWQIVGGYNNTMHVGAKFTDVINGRSKAGLTMDHLWAVNTQGYTEDDWARLAKDIINETARLTGRFTAQNDPTRPKYARVPQGKTCAFCAMLASRGFVYASEDTAGKWNRYHHDCDCKIVPSWGETKLEGYDPDKFKRMYKAAKSRAGTSETNAVMKTMNHMFPDELTSGVFELSAEWPAEVIQPRAKTWDHVFENHGPDATVPGKTHFPKEWDEKKIKWAVEETVVAPDLVIPAGRERQTLYKIVEDEIVRVWLQKTRNTGGRFTVHTAHPVVPQQKEKLWQQIRNAKPHTGG
>NZ_CP046514.1|WP_060618787.1|327840_329340_+|phage-portal-protein
MPATDHNGLAITNPATQDAYLAVQSANITRIKGVEDDDMPTIQKLLTTWRDHYARNMLRAEYYQARYRYNGVAYSIPKQMRALAKPMIGWPNKAVRALADLNVFEGFDAPDPLQAQVDELVDDNAWDTDVSEAITSAYIHGCSFITVYEDPDEPGRILMLPRSADWSAGIWDRRRRRLGSALTITDKDDRTGRITAFTAWLPGKVYEIDDSEGQWTARTIETHLDRPSVVPLVNDAQSYHPLGNSRITRTLMNLTDFGLRTMVRMEATAEFYAAPRVWFIGASKKFTDDTWSSIVSVMNGMPANKNGDKPTMQQLQQASMTPHADMLRTIALMVSSETDIPVNDLGITMDNPASAEAMAEAERKLSRTADRQNKRFGRALKEAMSIALAYQGADPDALRELRPIWAPVKETSDAARADWYQKVASTNPDFADSDVGLTRAGLTLDEIKAHRAYEKQKRTEAAVDTLRARLHAADQTATGTEAENGQQQPAAEQPQPGAA
>NZ_CP046514.1|WP_156624901.1|326407_327841_+|terminase
MNTRIDGASCQIIPDDLYTSGEPSLNRLAAAAGDRFDVWQRQINRIILAKSADGFWSARNTVLSIPRQTGKTYDIGWIAIHRAARTPGMRIVWTAQHFSVIKDTFESLCAIVLRPEMSGLVDPDHGISLAAGKEEIRFRNGSRIFFRARERGALRGVKKIALLVIDEAQHLSDSAMASMLPTQNRAWNPQTIYMGTPPGPRDNGEAFTRLRDKARAGRTHSTLYVEFTADRDADPLDRDQWRKANPSYPSHTSDESIANLWENLTGDDFRREALGIWDEHALSQAIDRRQWEEATIERRRPGGVMSFGIDMNPQRTRLTIGACMRYDDNTAHIELAEYRDTNHDGTMWAVNLIDKVWEQTAALVIDGQSPATALLPDLAQAGVTVTVTAATDMGRACGRLQDMLRDGTLTHLPEDGQQPLWQAAAKATTRPIGKNGLFGWNRPDDDTDISPLNAVTLALHGAMTTRRDPTQETETWF
>NZ_CP046514.1|WP_010081009.1|326235_326424_+|hypothetical-protein
MRNLIAEKLDEGSISSRDLASLTKRLADMSAEIEAIDKASNGHDPAMQALDTEDERLDEHED
>NZ_CP046514.1|WP_052789221.1|325752_326046_+|hypothetical-protein
MRADCYICHRPIDYELKAPHPYSFVVDETIALARGGTLTHDNSGPAHRWCNAIKGTHSLAWARERVAQLIAQGKAPQRTEPTQSGPIRCSDWFGGGE
>NZ_CP046514.1|WP_118240193.1|324528_325350_+|hypothetical-protein
MACGKPAGDANLCKECVKDWAKRLAWLLKAGMPALQQIAYKQATTRERSPRHGNRAYAAPPVNEAAQALYSAVETHLQLTGGMLGVKPIGHDRYDRPRTLMQWADITRLLLHHMPDLARLYTADDLYADLIRLSEKVETATTHAGERRLVGVCPDCLNTKGDDDEPIRTPIYAARSARYAVCPECGAWLDLKRVRLEYLRGAGLMHITRTQADAARWVRENTGVSVTGKDLANWRSRGKMPSTRRIDRHYWEWNIMELLACAQDRAERDGGDV
>NZ_CP046514.1|WP_010081012.1|324177_324363_+|hypothetical-protein
MRVTEGVRKIIVEWHGKGVPPEETARSLRIPIDEVKAIILQAHPAPAPEKPAGIGDNRRES
>NZ_CP046514.1|WP_131272312.1|323950_324166_+|hypothetical-protein
MNNIDAKITAWQLGPVTIMRGTATPGRDVTHPECFGRFTVVALSYGGAIRKCMRRVAQMCAKHSACEQLDR
>NZ_CP046514.1|WP_010081014.1|323722_323929_+|WhiB-family-transcriptional-regulator
MDWRHQAACRDHDPELWFSGKPYEQAAALAICRSCPVIGECRRFADEHNRINGYQLQGIWGGRRYGVK
>NZ_CP046514.1|WP_016462172.1|330842_331376_+|hypothetical-protein
MFLNHTPRHVRFVAAPPEGGMASGGADQPAASSESEDVGEPIDWEAKYKEALGHSRDWEKKAKANKAAADELEKLKEASMTEQEKAAKHVKELEDKVASYETAKQRAEWKAQASAETGVPADVIEGDSLEAMQSHAKRIHELLNPKPKAPAVHGADRQPSGKGPNESMVNYLRNLGL
>NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein
MALDTSKVLLPKEVATVITKRAKDTSTIAALSPSEPQLFLDKDYMVFTGNSEAEVVAEGAQKSSYEETLTPVVGKRFKVQTTTRVSNELQWADEDAKLEITSKILADQAAAMGRVLDYVIYHAFDPKKKTTLDGFNALAKTAVGVTATDDRVADIDSLAEAVSDEYDINGIAMSKTMANELRKIRVPSTGQRFYPEIPINLQVGNLDGIPAATSGTVNGRLITPATGILAFLGDFRLIRWGMVRDIWSEIIEYGDPDNTGKDLKGVNQIAYRTEAMYSYAILDPKGIAVLKKPTSTGRAAK
>NZ_CP046514.1|WP_060618784.1|332326_332641_+|hypothetical-protein
MAAPLTQTLVVQKTDEADEAGLAIPVRLVKPDGTPFAEGVATVSWDSITGKPATFTPPAPTASARGGVLQQAAEAQLAASADSAAIIAKVNATLTKLKAAGILT
>NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein
MDGYPSTPLNLSDGTTMTQDGGGEDETDDEKPFAQVGDLEARWHALTGDERTSAEALLADASDLIRTTCPRWHTAKPATLKRIACMAVKRAMQAGPDMSGVTQSTQTAGSYSESLSYANPAGDLYLTTSEKEALGGDGEAWAYDMAGGAA
>NZ_CP046514.1|WP_060618782.1|333101_333437_+|hypothetical-protein
MRGETITLIHRTKTGEDPGGGIIWNTREEQVDDVLIQDGSQSNSTDPIRPDGIRTAKTIHMPRAWPYRSLRGAKARIDGVEYTVIGDPRPYTGGITPTRWNLTVELADTRG
>NZ_CP046514.1|WP_060618781.1|333448_333724_+|hypothetical-protein
MAKVKLNLAGFRAVRQSAPIQHAIDQQAALIAARANSMAQVEGATYEAATHVSTPKGSVALATTGHGSEGNVKAMVDNAKHNTLLKSVKQQ
>NZ_CP046514.1|WP_060618780.1|333720_334086_+|hypothetical-protein
MSLNLEKTVKDWIDADPDGDGLTAYLEVPADRPQRFVTIERVGGRELEYSSHPTIAIQVWAESRWQAAQLATSQVLPRLLDLDLLDPIAAVGVESVIDLPDPGPPPQPRYQITISLDAAAQ
>NZ_CP046514.1|WP_060618779.1|334117_334705_+|hypothetical-protein
MAETNHNNKKNVSLGKPKKTGCLYYAPAGTALPTDATTALPAAYTCVGYLSEDGVTNATDTDTTDINEMGGIKVLSEISGYGETWQFNMIETNEASLKLRFGTANVTGTADKLTVYHAIPSGESLVLVFEIAMTGNRVKRIVVADGTITEFDDTTYSAGDAIGYGVTMSANPSDLINGATSVEYIANVAAASLSK
>NZ_CP046514.1|WP_060618778.1|334759_335080_+|hypothetical-protein
MAAKQPQDHKTPKNQPRTVEAMGVTLAVSPAIFDDLDMVEYLYDLQAAQEGDGTGAFAIVPFLKKLCGPQYAAMKDALRDPDTGRVSIDKVSEFIAQLLEQVAPNS
>NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein
MLATAPDALEADFQRFYGLNLDLIWTGELPANRAAALAANLPRQSIIWQKLNPRLAWDDQTYLLADIRDSLAFLAWTKTKEASRKGARWRGQLQRPGTVRHEATGGEVMAMDDEQLAAYLAAPRTTIREA

Crispr_ID: NZ_CP046514_3

• CRISPR_ID: NZ_CP046514_3
• CRISPR_location: 337721-337895
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers
• Cas_protein_info: RT

Consensus repeat of NZ_CP046514_3

Consensus_repeat	Method
AACGTCCTGAACGCCATCAGCGGCGTATGGACGAGCGTATGGA	PILER-CR

spacers of NZ_CP046514_3

>3.1|337764|31|NZ_CP046514|PILER-CR
ACGCGGTCAGGTCCGTCGCATCCGCCATCTG
>3.2|337838|40|NZ_CP046514|PILER-CR
GGTGTCCACATGCATCCAGAATGTGCGCAACACCATCTCG

CRISPR arrays and Neighbor proteins around NZ_CP046514_3

CRISPR arrays

The CRISPR arrays of NZ_CP046514_3

>merge|NZ_CP046514|3|337721-337895|PILER-CR
AACGTCCTCAACGCCATCAGCGGCGTATGGACGAGCGTCTGGAACGCGGTCAGGTCCGTCGCATCCGCCATCTGGAACGCGATCAGCGGCGTGGTGTCCACATGCATCCAGAATGTGCGCAACACCATCTCGACCGTCCTGAACGCCATCAGCGGCGTATGGACGAGCGTATGGA

>NZ_CP046514|3|1|337721-337895|PILER-CR
AACGTCCTCAACGCCATCAGCGGCGTATGGACGAGCGTCTGGA	ACGCGGTCAGGTCCGTCGCATCCGCCATCTG
GAACGCGATCAGCGGCGTGGTGTCCACATGCATCCAGAATGTG	CGCAACACCATCTCGACCGTCCTGAACGCCATCAGCGGCG
TATGGACGAGCGTATGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_156624904.1|343852_344575_+|hypothetical-protein	unknown	unknown	gnl|CDD|371181
NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein	unknown	unknown	gnl|CDD|286444
NZ_CP046514.1|WP_156625442.1|339373_343093_+|phage-tail-protein	unknown	unknown	gnl|CDD|377677
NZ_CP046514.1|WP_016462172.1|330842_331376_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618775.1|338573_339353_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein	unknown	unknown	gnl|CDD|375127
NZ_CP046514.1|WP_156624920.1|349809_350073_+|holin	unknown	unknown	gnl|CDD|374894
NZ_CP046514.1|WP_060618778.1|334759_335080_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156624911.1|347753_347984_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618780.1|333720_334086_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein	unknown	unknown	gnl|CDD|377449
NZ_CP046514.1|WP_156624917.1|348492_349725_+|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|119379
NZ_CP046514.1|WP_060618781.1|333448_333724_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156624906.1|344591_346172_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618991.1|343102_343699_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618784.1|332326_332641_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618782.1|333101_333437_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_060618779.1|334117_334705_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156624909.1|346587_347823_+|reverse-transcriptase	RT	pfam00078_RT_CAS-I:CAS-III	gnl|CDD|238828
NZ_CP046514.1|WP_156624914.1|348111_348429_+|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP046514.1|WP_156624909.1|346587_347823_+|reverse-transcriptase	RT	pfam00078_RT_CAS-I:CAS-III	9.9e-18	59.2	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_156624917.1|348492_349725_+|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|119379	cd06417, GH25_LysA-like, LysA is a cell wall endolysin produced by Lactobacillus fermentum, which degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. The N-terminal glycosyl hydrolase family 25 (GH25) domain of LysA has sequence similarity with other murein hydrolase catalytic domains while the C-terminal domain has sequence similarity with putative bacterial cell wall-binding SH3b domains. This domain family also includes LysL of Lactococcus lactis.	8.62891e-106
NZ_CP046514.1|WP_156624904.1|343852_344575_+|hypothetical-protein	gnl|CDD|371181	pfam10651, DUF2479, Domain of unknown function (DUF2479). This domain is found in phage from a number of different bacteria. It is purported to be a putative long tail fibre (Bacteriophage A118) protein, but this could not be confirmed.	0.00109369
NZ_CP046514.1|WP_156624909.1|346587_347823_+|reverse-transcriptase	gnl|CDD|238828	cd01651, RT_G2_intron, RT_G2_intron: Reverse transcriptases (RTs) with group II intron origin. RT transcribes DNA using RNA as template. Proteins in this subfamily are found in bacterial and mitochondrial group II introns. Their most probable ancestor was a retrotransposable element with both gag-like and pol-like genes. This subfamily of proteins appears to have captured the RT sequences from transposable elements, which lack long terminal repeats (LTRs).	5.32945e-22
NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein	gnl|CDD|286444	pfam09355, Phage_Gp19, Phage protein Gp19/Gp15/Gp42. This family of proteins are functionally uncharacterized. They are found in a variety of bacteriophage.	9.39276e-13
NZ_CP046514.1|WP_156625442.1|339373_343093_+|phage-tail-protein	gnl|CDD|377677	pfam06605, Prophage_tail, Prophage endopeptidase tail. This family is of prophage tail proteins that are probably acting as endopeptidases.	1.50018e-30
NZ_CP046514.1|WP_156624920.1|349809_350073_+|holin	gnl|CDD|374894	pfam16938, Phage_holin_Dp1, Putative phage holin Dp-1. Phage_holin_Dp1 is a family of putative phage-holins from Gram-positive bacteria, largely Firmicutes, with two probable TMSs. The family shows lytic activity.	6.18725e-14
NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein	gnl|CDD|375127	pfam17318, DUF5361, Family of unknown function (DUF5361). This is a family of unknown function found in Bacteria.	0.00120607
NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein	gnl|CDD|377449	pfam05065, Phage_capsid, Phage capsid family. Family of bacteriophage hypothetical proteins and capsid proteins.	6.24073e-14

Protein sequences

>NZ_CP046514.1|WP_060618777.1|335091_335484_+|hypothetical-protein
MLATAPDALEADFQRFYGLNLDLIWTGELPANRAAALAANLPRQSIIWQKLNPRLAWDDQTYLLADIRDSLAFLAWTKTKEASRKGARWRGQLQRPGTVRHEATGGEVMAMDDEQLAAYLAAPRTTIREA
>NZ_CP046514.1|WP_060618778.1|334759_335080_+|hypothetical-protein
MAAKQPQDHKTPKNQPRTVEAMGVTLAVSPAIFDDLDMVEYLYDLQAAQEGDGTGAFAIVPFLKKLCGPQYAAMKDALRDPDTGRVSIDKVSEFIAQLLEQVAPNS
>NZ_CP046514.1|WP_060618779.1|334117_334705_+|hypothetical-protein
MAETNHNNKKNVSLGKPKKTGCLYYAPAGTALPTDATTALPAAYTCVGYLSEDGVTNATDTDTTDINEMGGIKVLSEISGYGETWQFNMIETNEASLKLRFGTANVTGTADKLTVYHAIPSGESLVLVFEIAMTGNRVKRIVVADGTITEFDDTTYSAGDAIGYGVTMSANPSDLINGATSVEYIANVAAASLSK
>NZ_CP046514.1|WP_060618780.1|333720_334086_+|hypothetical-protein
MSLNLEKTVKDWIDADPDGDGLTAYLEVPADRPQRFVTIERVGGRELEYSSHPTIAIQVWAESRWQAAQLATSQVLPRLLDLDLLDPIAAVGVESVIDLPDPGPPPQPRYQITISLDAAAQ
>NZ_CP046514.1|WP_060618781.1|333448_333724_+|hypothetical-protein
MAKVKLNLAGFRAVRQSAPIQHAIDQQAALIAARANSMAQVEGATYEAATHVSTPKGSVALATTGHGSEGNVKAMVDNAKHNTLLKSVKQQ
>NZ_CP046514.1|WP_060618782.1|333101_333437_+|hypothetical-protein
MRGETITLIHRTKTGEDPGGGIIWNTREEQVDDVLIQDGSQSNSTDPIRPDGIRTAKTIHMPRAWPYRSLRGAKARIDGVEYTVIGDPRPYTGGITPTRWNLTVELADTRG
>NZ_CP046514.1|WP_060618783.1|332652_333105_+|hypothetical-protein
MDGYPSTPLNLSDGTTMTQDGGGEDETDDEKPFAQVGDLEARWHALTGDERTSAEALLADASDLIRTTCPRWHTAKPATLKRIACMAVKRAMQAGPDMSGVTQSTQTAGSYSESLSYANPAGDLYLTTSEKEALGGDGEAWAYDMAGGAA
>NZ_CP046514.1|WP_060618784.1|332326_332641_+|hypothetical-protein
MAAPLTQTLVVQKTDEADEAGLAIPVRLVKPDGTPFAEGVATVSWDSITGKPATFTPPAPTASARGGVLQQAAEAQLAASADSAAIIAKVNATLTKLKAAGILT
>NZ_CP046514.1|WP_060618785.1|331421_332327_+|phage-major-capsid-protein
MALDTSKVLLPKEVATVITKRAKDTSTIAALSPSEPQLFLDKDYMVFTGNSEAEVVAEGAQKSSYEETLTPVVGKRFKVQTTTRVSNELQWADEDAKLEITSKILADQAAAMGRVLDYVIYHAFDPKKKTTLDGFNALAKTAVGVTATDDRVADIDSLAEAVSDEYDINGIAMSKTMANELRKIRVPSTGQRFYPEIPINLQVGNLDGIPAATSGTVNGRLITPATGILAFLGDFRLIRWGMVRDIWSEIIEYGDPDNTGKDLKGVNQIAYRTEAMYSYAILDPKGIAVLKKPTSTGRAAK
>NZ_CP046514.1|WP_016462172.1|330842_331376_+|hypothetical-protein
MFLNHTPRHVRFVAAPPEGGMASGGADQPAASSESEDVGEPIDWEAKYKEALGHSRDWEKKAKANKAAADELEKLKEASMTEQEKAAKHVKELEDKVASYETAKQRAEWKAQASAETGVPADVIEGDSLEAMQSHAKRIHELLNPKPKAPAVHGADRQPSGKGPNESMVNYLRNLGL
>NZ_CP046514.1|WP_060618775.1|338573_339353_+|hypothetical-protein
MLYQRRMRLPHVEDPTLNGVPLERMMLSLSSDGVTIDAAKPTLSMQDMPGRDGRLDLTLTDPTGAACMGDRAITLSLYAIGGEDDILTAKTRLAALAGTIVSLSWRSLPGEYKGRMSLGAWADKWAGGHQIGTLVQAEIDARPYLIGRSRSIALKTGMNTIHVKGNRPCWPTWTLTPASGAKTVSIKDAHGHKLAIASTTAITGRISIDTDPDKRELRVNGNLMAPTLESDYFPLLPGPNTPTLTGCTGTLTYRPLTLI
>NZ_CP046514.1|WP_156625442.1|339373_343093_+|phage-tail-protein
MIFDRWGNPLGDLPYVIKALRTRATDGTDTLDITTIGEINKDERIVFQDSMGRWAEYLCQSTQTARAAGMPVTVAYCAGSIAELSRTYIEDKRNRNANAKACLAKALEGTRWTVGTVETGTITGMANLAFYHCTVLEAAQKTADTYGLEVQTEYQPDPTGNQIGRRIIHLVEHRGSANTTKRFEYGKDLTQIKRDIDSGDVITRLYGWGKGIEQTNDQGEATGGYSRKISFADVNNGKPYVQDDQALADWGIVGADGTRHHSEASVDFPDCEDPKELLALTKNALKTRTTPVVSYTADVTALGQAGLSAEGTDVGDSVQIIDTSFTNPLRLEGRILQIEEDLAGSLADTKITLGNIRQSYTQRLAAQQQALDKLVSNSGAWNSAAGGTGPYMKDLIDRINQIMNATGGYTYLKPGQGIYVYDKPEDQNPTQCIHIGGGYWRIADHKNANGNWDFRALANGKGIFADTIFTGRLSDAAGLNFWDMDTGEFSLSARSTVGGKTVQEYADGALSDANSYTDAAKQAAITEAKRQADAADTAKLAEAKKYAEAKAGEAETAAKAQSKADGEAAKAAAQAYVDALDESLGQRSIFDRLTNNGKTQGIYLSGGLLYLNATYMKTGVLDAALVKAGRLTDKKGLNYWDMDTGEFSLSANSTINGNKASGLATQTQAQKLATDAQTAAKAYADRVGASTLSSAKSDATAKANTALSGAKTYVEAIMAYGSNLVRNPNGNPDHDLDKLGASKLTKTMPATHPEGITSAIHLGNVRDTYFGWPLDTFRGHTFRLSGWAYRKAGNVTSSFGIHWTDTGNGNHWQTIAQSAANANGWTYVSGSYAVPSNAKTARLWMQVDRNTATASDADWYWTGLQCTDETAARSYVDTFEGELTQTYIFNKLTNNGQKQGLYLSNGLLYINATYMKTGVITGKRSYWNLDTGQFVMTDANGNETVHLDGDGADNLLTGTFRTARTGNRVQISPSFKQTEISGTDSLEGAGIQFYHGSGSYQHPYIAVESTTQQEGEVSALTFNGGRRAEHDPGAFARIGERKADDNTTKVGTVFLAAEKDYDSTDPSSRRAYLSLWSPKTGDTTATLAARDPNGLVGIQADIDSGYLYMGGFLGGFSGGRSTFQTAWWEGQNIGAMKYTQYTLTSSNPAKYGSYKAFATVDHRQDDPGLFIATVSDCTASGWSIWVYTPPERVVTNMDASWNRNTSTGVVSNLSINTHYAALFQGNKPYQLHTIGFLKK
>NZ_CP046514.1|WP_060618991.1|343102_343699_+|hypothetical-protein
MQVTTINDQPTLLIDRPLTADTTPPAAVTDGMTTITTTPPTPDMRHDAIPLAAIASWRTLLGIETDTEAVAAILHVRDHGEPDPDPQTGETAWTSAYNAIENAINTTTAPADNTPDDPLTAGRNKTRGLLGLPLLPDTATTNPSAEDETDAPTTIALPAGIEPTELGNLLADHADDINDATDRFIESLTQTNDGKDHD
>NZ_CP046514.1|WP_156624904.1|343852_344575_+|hypothetical-protein
MATLDSFREAAGEPIQLDLANGYIADIRLNAGDINGRTITVELTDNGTPITDTTGITVALAYNTSPGSGLGDRVSMPAVFGTPTATYRVAVPRKALQHAGAILMGIEVSVNGTRTCSRNFHGIVERAVFDATAPDAQDQMGVLDKLIDDATTAINKAVSAAGEAKDAADAARTSVIEYRQLSDDCKAKIAASAAAGVVFATQSDIDTQYDSVIAPALSDAETIPPLTQSDIDWALDIINR
>NZ_CP046514.1|WP_156624906.1|344591_346172_+|hypothetical-protein
MANTQKVMTLADTAKLIAKVHANAAKGVRFEYDGTKGEYGNIAAYFAAHKDGKVYGVRFPKYTYSNAPTGVKTRDNANLTIEISTNDKAGRDDYSALNAFRTWDVNATVDDDGIPHVTAIDGIDTRFRRDGSNGDVYVMTCPGYYKLEATSTHNEFLYSDTQYDGYAPLPGVLLPDGSKRPCLLFAKYAASLDSQQRPLSVSGKEIDREFGSQNRAIDYALKKGKGYAGRCAGDTFYVQLMLMLKYATKNSDVLGGCWQYTPQTAVTKAETGVKRVIIATSYANNFDVGSTVNVGTDKERNNTGNYSAARARTILSKTAIDASNTALNLDGDAITTTTACFVNSMPWKTGATDKLLGTDGRPSTASAANHQPIRLQGIELFNGIYESDADLIANAVKDNDNLGRIELYRVFDITKASKTSTANYTKIGEFTARDKTTNDSGRYAEDFTLSNGVIIPTGLNATSTTGMCDAIGANPLTSQGLRQVRRFGSLGDGAACGAFAAYLWNGLADRWWGFGGRLSALGRTKA
>NZ_CP046514.1|WP_156624909.1|346587_347823_+|reverse-transcriptase
MFVRRAIDHYLKGKRSRRDVTRFLETHPDLDRLASQIGDEIREGRYRDTRITYFNRVEPISGKHRVIGRETVRHQIYDHVAVMALQPLFDAKVGRWQTASIPNRGTIDARRAIKRWTRERSSKWFVKLDVRKYYPSIDRPTLKAMLTRDVGDPILLRLVFHLIDRYQGDNGLNIGSYLSQWLANYYLSHAYHWIESPAMTIERTSRRTGEITRRRLITHQLWYMDDLLLIGTSKRDLKIAARRTVRYLKDRLKLDVHEEWNCKRLDLEPIDMVGYTFRPHGRVNIRSGVFLRARRTFNRARRRPMTEQLARRCCSYYGYLRNSDSIRYRRRHRIDHTMRRATRYLSTQHRKENPCSRPYPAPNPSTRSATTRAATASRTSASAATSPPSCTRTAIPRGRNTPPTKPIPCAT
>NZ_CP046514.1|WP_156624911.1|347753_347984_+|hypothetical-protein
MHEDGDTTWTEYTADEAYTVRDLTEQEAIEQADSIWLDCVQASKSDSQRLAGLEASSLDQDEALAEIYQLLSGGEA
>NZ_CP046514.1|WP_156624914.1|348111_348429_+|hypothetical-protein
MNPIAQQLTVWAATGIITALGGYMLGWWRGYRRKSDAMQTGVRTLLLCKLEQMQREMVANDGIADNTAKRTAQLVYDSYHSLGGNGHGTQVNQDIQDAPIAPKKV
>NZ_CP046514.1|WP_156624917.1|348492_349725_+|LysM-peptidoglycan-binding-domain-containing-protein
MGKIKNKSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQDANVTCTASYDFAVVKVSQGVGFENSSWRTQAKCVTDRGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDWESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNAPTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPAGAAKPVTPPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLGSATVATQQAAQANTTRVAVRSGDTMSGIASRTGLWPLSRWSVPSGNLNLIYPGQVVTYNGGGSVATGSNAPPATRTVTVRSGDTLSGIAARLGIGYTQLTGYRSGNPNVIYPGEVLHY
>NZ_CP046514.1|WP_156624920.1|349809_350073_+|holin
MTDENTEPKTAGTEPTVPDWLLPSRVYDVLKWLALIVLPAVGVLVQTLGPVWGWTWADPAATTINAVALTIGVVIGASTLKAKASKA

Crispr_ID: NZ_CP046514_4

• CRISPR_ID: NZ_CP046514_4
• CRISPR_location: 1257299-1257375
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_4

Consensus_repeat	Method
TCCATGTGGATGTCCATGGACATATCCAT	CRISPRCasFinder

spacers of NZ_CP046514_4

>4.1|1257328|19|NZ_CP046514|CRISPRCasFinder
GGACATATCCATGTGGATG

CRISPR arrays and Neighbor proteins around NZ_CP046514_4

CRISPR arrays

The CRISPR arrays of NZ_CP046514_4

>merge|NZ_CP046514|4|1257299-1257375|CRISPRCasFinder
TTGATGGGCATCTCCATGTGGATGTCCATGGACATATCCATGTGGATGTCCATGGACATATCCATGTGGATGTCCAT

>NZ_CP046514|4|3|1257299-1257375|CRISPRCasFinder
TTGATGGGCATCTCCATGTGGATGTCCAT	GGACATATCCATGTGGATG
TCCATGGACATATCCATGTGGATGTCCAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_007056059.1|1244691_1245726_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_077383298.1|1248357_1249311_+|DUF4913-domain-containing-protein	unknown	unknown	gnl|CDD|379809
NZ_CP046514.1|WP_007057623.1|1268234_1269140_+|Fic-family-protein	unknown	unknown	gnl|CDD|225718
NZ_CP046514.1|WP_012471833.1|1256724_1257168_-|plasmid-mobilization-relaxosome-protein-MobC	unknown	unknown	gnl|CDD|368576
NZ_CP046514.1|WP_156625156.1|1253566_1254349_+|cell-filamentation-protein-Fic	unknown	unknown	gnl|CDD|225718
NZ_CP046514.1|WP_156625161.1|1258010_1260170_-|type-IA-DNA-topoisomerase	unknown	unknown	gnl|CDD|236078
NZ_CP046514.1|WP_007057142.1|1254477_1255449_+|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl|CDD|236696
NZ_CP046514.1|WP_007054354.1|1260276_1260570_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625154.1|1250646_1252122_+|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl|CDD|341493
NZ_CP046514.1|WP_156625158.1|1257504_1257936_-|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl|CDD|289422
NZ_CP046514.1|WP_115790998.1|1265184_1267002_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625168.1|1269165_1269765_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_007057804.1|1245827_1246469_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625166.1|1267041_1268073_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625150.1|1246549_1248358_+|TraM-recognition-domain-containing-protein	unknown	unknown	gnl|CDD|378923
NZ_CP046514.1|WP_156625152.1|1249297_1250425_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_010080726.1|1255494_1256763_+|hypothetical-protein	unknown	unknown	gnl|CDD|370247
NZ_CP046514.1|WP_156625163.1|1264083_1265169_+|antirestriction-protein-ArdA	unknown	unknown	gnl|CDD|377800
NZ_CP046514.1|WP_080561717.1|1260775_1261153_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_080575028.1|1261730_1263191_+|CHAP-domain-containing-protein	unknown	unknown	gnl|CDD|236304

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_077383298.1|1248357_1249311_+|DUF4913-domain-containing-protein	gnl|CDD|379809	pfam16259, DUF4913, Domain of unknown function (DUF4913). This family consists of uncharacterized proteins around 150 residues in length and is mainly found in various Arthrobacter species. The function of this family may be functional in enableing the growth of Arthrobacter sp. strain JBH1 with nitroglycerin as the sole source of carbon and nitrogen.	6.91184e-18
NZ_CP046514.1|WP_007057623.1|1268234_1269140_+|Fic-family-protein	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	2.13967e-22
NZ_CP046514.1|WP_012471833.1|1256724_1257168_-|plasmid-mobilization-relaxosome-protein-MobC	gnl|CDD|368576	pfam05713, MobC, Bacterial mobilisation protein (MobC). This family consists of several bacterial MobC-like, mobilisation proteins. MobC proteins belong to the group of relaxases. Together with MobA and MobB they bind to a single cis-active site of a mobilising plasmid, the origin of transfer (oriT) region. The absence of MobC has several different effects on oriT DNA. Site- and strand-specific nicking by MobA protein is severely reduced, accounting for the lower frequency of mobilisation. The localized DNA strand separation required for this nicking is less affected, but becomes more sensitive to the level of active DNA gyrase in the cell. In addition, strand separation is not efficiently extended through the region containing the nick site. These effects suggest a model in which MobC acts as a molecular wedge for the relaxosome-induced melting of oriT DNA. The effect of MobC on strand separation may be partially complemented by the helical distortion induced by supercoiling. However, MobC extends the melted region through the nick site, thus providing the single-stranded substrate required for cleavage by MobA.	0.000741485
NZ_CP046514.1|WP_156625156.1|1253566_1254349_+|cell-filamentation-protein-Fic	gnl|CDD|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.23931e-10
NZ_CP046514.1|WP_156625161.1|1258010_1260170_-|type-IA-DNA-topoisomerase	gnl|CDD|236078	PRK07726, PRK07726, DNA topoisomerase 3.	3.21696e-176
NZ_CP046514.1|WP_007057142.1|1254477_1255449_+|DNA-(cytosine-5-)-methyltransferase	gnl|CDD|236696	PRK10458, PRK10458, DNA cytosine methylase; Provisional.	3.26064e-146
NZ_CP046514.1|WP_156625154.1|1250646_1252122_+|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl|CDD|341493	cd17808, HipA_Ec_like, type II toxin-antitoxin sytem toxin HipA from Escherichia coli and similar proteins. This family contains type II toxin-antitoxin (TA) system HipA family toxins similar to Escherichia coli HipA, a serine/threonine-protein kinase that phosphorylates Glu-tRNA-ligase (GltX), preventing it from being charged, leading to an increase in uncharged tRNA(Glu). This induces amino acid starvation and the stringent response via RelA/SpoT and increased (p)ppGpp levels, which inhibits replication, transcription, translation and cell wall synthesis, reducing growth and leading to persistence and multidrug resistance. HipA is the toxin component of the HipA-HipB TA module that is a major factor in persistence and bioflim formation; its toxic effect is neutralized by its cognate antitoxin HipB. HipA, with HipB, acts as a a corepressor for transcription of the hipBA promoter. In the Escherichia coli HipAB:DNA promoter complex, HipA forms a dimer and each HipA monomer interacts with a HipB homodimer which binds DNA. The HipAB component of the complex is composed of two HipA and four HipB subunits.	1.48742e-87
NZ_CP046514.1|WP_156625158.1|1257504_1257936_-|ribbon-helix-helix-domain-containing-protein	gnl|CDD|289422	pfam12651, RHH_3, Ribbon-helix-helix domain. This short bacterial protein contains a ribbon-helix-helix domain that is likely to be DNA-binding.	0.00415158
NZ_CP046514.1|WP_156625150.1|1246549_1248358_+|TraM-recognition-domain-containing-protein	gnl|CDD|378923	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG. This family includes both TraG and TraD as well as VirD4 proteins. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems. This domain interacts with the relaxosome component TraM via the latter's tetramerisation domain. TraD is a hexameric ring ATPase that forms the cytoplasmic face of the conjugative pore.	2.87151e-25
NZ_CP046514.1|WP_010080726.1|1255494_1256763_+|hypothetical-protein	gnl|CDD|370247	pfam09019, EcoRII-C, EcoRII C terminal. The C-terminal catalytic domain of the Restriction Endonuclease EcoRII has a restriction endonuclease-like fold with a central five-stranded mixed beta-sheet surrounded on both sides by alpha-helices. It cleaves DNA specifically at single 5' CCWGG sites.	2.40177e-90
NZ_CP046514.1|WP_156625163.1|1264083_1265169_+|antirestriction-protein-ArdA	gnl|CDD|377800	pfam07275, ArdA, Antirestriction protein (ArdA). This family consists of several bacterial antirestriction (ArdA) proteins. ArdA functions in bacterial conjugation to allow an unmodified plasmid to evade restriction in the recipient bacterium and yet acquire cognate modification.	1.38023e-26
NZ_CP046514.1|WP_080575028.1|1261730_1263191_+|CHAP-domain-containing-protein	gnl|CDD|236304	PRK08581, PRK08581, amidase domain-containing protein.	1.83561e-24

Protein sequences

>NZ_CP046514.1|WP_012471833.1|1256724_1257168_-|plasmid-mobilization-relaxosome-protein-MobC
MARKRRCRQNGPREKAVLIRVDDDEKRMLQDAARRRGQTVSLTVIEAVKLLEGSLYVEEEEHDSPTVQALRDIEYQLRRIGRNVNQIAHNANREMNATIEDEASASYAVRQCRELIDHLDAVIGQSGGVPDDANRSEEGQALRTVRL
>NZ_CP046514.1|WP_010080726.1|1255494_1256763_+|hypothetical-protein
MSDYGRIGDYIGPVAAKKLSAVDIDANSSNQHEFGGNDALRRLLGTGEDRRASQGHGIPTALMYLSDDDAPAVADLETTWYDARRNKPNRSAEWRLYYKDCEPIRMARPGDLMCFGMLRDNRLLIIIAQHDSTAEAQAKWLFGIDDEQEGAFRFHDNTERELDAFGAQIFEALGINVEVRDDTYLPEMIGRWGYRFPSNEEFAAFSQSSLTDVDPTHDDPDDVVIEYYDRSYLLFKLYERAVIQHDYDAAPFVSDGVIDVDSFTSFYTSVRNRRMSRAGKVLEIHIAHILDARGIEYEAQAKTENGKKPDFLFPSQAAYEDPAFPEEQLRMLASKTSIKDRFRQVADEANRIRDKHLFTLTPGDVTHPKLAQLDELHIHLVMPKVVKESYDDLIQGETMTFSRFIEEIQGLQADRPQSLTLL
>NZ_CP046514.1|WP_007057142.1|1254477_1255449_+|DNA-(cytosine-5-)-methyltransferase
MSEIRIADLFAGIGGIRMGMVQALGDAAHVVYSSEWNKYSVQTYEANWHDENPVAGDITKVDEHDVPDIDLLLAGFPCQPFSIAGVSKKQSMGRPTGFEDKTQGTLFFDVARIIKAKQPKAFLLENVKNLLSHDRGRTFKTIYSVLTEDLGYHVTYKLIDAAGFVPQHRERTYIVGFREENGFTFDDVKPIAHGNVGSILLPASQVPDKYVLSDKLWTYLQNYKKKHEAAGNGFGYGMVDAATDHTRTLSARYGKDGSEILVSRGEGKNPRRLTPRECARLMGYPDSFSIPVSDTQAYRQFGNSVAVPVIRAIGEAMKPYLSD
>NZ_CP046514.1|WP_156625156.1|1253566_1254349_+|cell-filamentation-protein-Fic
MEPVRNDTTTDRRTAVELAKRLLVDLIWRTAKIEVDGVTFPDTQEIFDGRAPEGMSVDDIVTVNNIKRAWRFLLGNIDYPVDWQYIREYNRIIGEGRVRDAGRLREYGVRIGGTGWVPEIPTVESPQERVRGILEESEGEATAMLLFGAVTRGQWFSDGNKRTALMVANHQLIHDGIGVFSIPPEDKAQFVSMLLRYYETGDYSRLSDWLSQNAVGHVPGGLTLAQSSGVAEKTNDAVNGMGTVPGVPLDGLDGGSGLLR
>NZ_CP046514.1|WP_156625154.1|1250646_1252122_+|type-II-toxin-antitoxin-system-HipA-family-toxin
MRARTHVRHGSRRRRTRQESRGPPLKRRRARGDRSDLHPLRVQDVRPAAHPHRNAAVRLRGETAVRELHAWENGHHVGVFSEDDEERISFAYDANEGLPISLSLPRTGGWRDQAPRNFLDNLLPDNPNVRQAMREHLNASSAGVFDLLDRVDATGGLVFSLSPEPPIPSPTLRLISDSQIANEIDRIERTRNYWWDEDSHCRFSLGGAQGKFTLSRVDGKWYWPDMMLPSTHIVKPKPHDLPEATKVELATMRLSELCGIDTPARGEITAQRKTAYIVERFDRRLEEGRIVRLRQEDFLQALGLPTRDKYDPSADDCLDLLQRIDASGSLSYRWLERLAFNTSSANSDAHAKNYSLILDPASGIRLSPQYDAVATRYWPEFNWELTMPLNEDHAFAEHTTPQDWEDLATRHGLDGSRVADMARRMAGKVLAGISESCEGLDARMADRLNTCWTKANESIEPIMPGDEPANAPDPASALPDSLGFPSSGRTI
>NZ_CP046514.1|WP_156625152.1|1249297_1250425_+|hypothetical-protein
MAQTDPEDGFDQIMVQSWNSVAQQLRTLHNELSGDRARRRERAERAVQNERYEQTRRQQQSIRLEQWEMDNRERLNKGFESTLNATVLADGDGWRKMRDSSLLQGWMVADQLEGNDPGYRRQIIEAKARLKDEWSKRHPETHIDAAADQLTNHVNITYTDQSPALQATLNAFNTAGVPVDLQRVEDTQAFQAAHGDDATFFVDSRLTGQWTGYDHDRIVEAVMCAPVNGVDDAASRISFLKDQGLPESSHADNKATGDEPSTISEAERTENADAAPIIETPTPVREHTKPAADERKPASEPETTGGGDLTTGEPDGYEEPPLDLNEPEEWNGPDPFGEYSPAMESSMNPTDQPIPDQANVSTPQILQPETNGNAR
>NZ_CP046514.1|WP_077383298.1|1248357_1249311_+|DUF4913-domain-containing-protein
MSEHTSNTTSGPDGEEWERAVGAARTLLSSDCGWLELFTRAILEEKGVPYGKGLPNPEAPHIPEDKEIEEETMPGQGEPTPTAPEVPAGRHAAEPIRSGIPADAGETGNGYENPPEDATDRDDTPPKAGAEESDTRILPAPEGKTDLGRDESGDLDPARARDVSGQFGARMRRSETYYPNLAAFVERFVANVFCYHQSASVNMQWVSDWWRYPALVFPLDAMWRAYENARKAPGQMMIFYIQAASMLDRVFDKDRGIVASLDCKQNLTRKGEPLPCERPRRAWREPILETLSVPAAGGKENKETTITPTRRRNNGSN
>NZ_CP046514.1|WP_156625150.1|1246549_1248358_+|TraM-recognition-domain-containing-protein
MADVDPKLQSNRVKDLGGTVRPSRKIELAIIVAVSLILTTFALVCSHAGHPFQIFALMYLVSGQWSLTAGQWALAVAVLVVLAVACGVGAWLIASKAVPWATGAKARTRVDVYAPAMGHGEAVEKVTRQRAEAMASRLIEADHWRKGMSPGYPLGLNIVDNTSMYTSWEDMAIVLAGPRSGKSLCYAIPAVLSAPGPCLATSNKGDILDVTAPIRRLDHPNGEIWTFDPERIADPNRKSAPWVWDLIASVQSIADAKRIADCWRYASGQPQTGGDDFFPGTAAQQLADYLFAAHLGGRSVSDVFRWCSNERDTSPADILSEYPRYAGIASRVSSVIALTPETRSGVFGSLQTMVAFLADPEIIDWIDPHRDAEGNIDERRGLFDPYEFATSEDTLYLLSAQGRPSTALTASLTAVVAFTAFQRAQSEFTGNNRRLPVPLCCVLDEAANICRWPELADVYSYFGSAGIPIMTIWQNPDQGRAAFGETNFGSLFNNANITVYLGGIKDAKFLGEISQLVGQREIVRGSVNIDGNGRRSVNNSIQKENILDVSDLTEWPVGRALLLASQSRAQIVKTLPWTGNRQWADALAQAKAKAREEQRKAA
>NZ_CP046514.1|WP_007057804.1|1245827_1246469_+|hypothetical-protein
MPQSMQVVRGLLAANPDYWPAKTNADGTTSSAYLRATVYEDRPRVRQKDGSYTDNPLGPVRTTVKFWGQAAELLHGMDFRQGDAVVATGRMGDPDAFISQKDGKAYARPVVIGDSMQIDSIVSQRIQLARERKRQDKEQAGAVADAGRTDPWTDQVDASRGEYVGDGVPRTFNGEPFEPLSGYPTPGAAPAPADPAAPDFLSTPSDFTTGNAR
>NZ_CP046514.1|WP_007056059.1|1244691_1245726_+|hypothetical-protein
MPLENTDAEERITRETMIGWIEHWGESYDDVRPDDGAMRLANRIIEYNAATETIEALRNPDAVYDELASILQPVLSSMDGTYFAGSEWFAGEVDRMEADRINGEQPEETDGLASEEPRIPFIVESEATAADTDEPPLDELITAATHEYLDSGMTYDGFSEHVRTTWRNAAAYDWSKLMAEPRSTGEWSSDANRLAVLGVMMQFAPESTCMMIASDILAENAPLSLPALRERINTPDGMVNTDLLFSRLIDNGTTPDPARIDMAMGILGPLEANAPTDACYRIIGLKAMLSLAMGDGEKARELAEQAIGYDASDRFASSVLDRLPETDPAMEAANVWENGGHLGR
>NZ_CP046514.1|WP_156625158.1|1257504_1257936_-|ribbon-helix-helix-domain-containing-protein
MRRYSHAFRVLMDQELFNLLAEASAKTGIPKSRFVRYAIQPFSYTELAPGTTDWNDVYRTDPDPEHPLKRGRQLNVMLTGDEYEMLCRAAFKLGIARSAWVRERVYALLCRSYADELSPLTDASIRDNATMLLKELKTKGAGR
>NZ_CP046514.1|WP_156625161.1|1258010_1260170_-|type-IA-DNA-topoisomerase
MRLVIAEKKSVATAIAQALCAAPVQRDGCYECGQLLVTWAQGHLIDLAMPEDYKDRDWGKWSLDTLPVDPSGHWRWKISAERGAGSRYRQIVRLIRRTDVDCLVNACDPDREGEAIFRRIADMEGSHKPELRLWVASLEAEAIQAAWRAMKPESEYQGLAWSAEIRSKADWLIGMNASRAYSLLYNARFSVGRVQTPTLAMIAERDRQIRNHKPVPFWTVIADMGGWRLSSERIDSKDAAMLLCGQAEHGRFRIMSVNRRRVNDRPPRLYDLTGLQKDMSRLHGMTAARTLQALQHLYELKLATYPRTDSRYITHDDLETLTALLESGRLAQGFVTREGIPGHPRPELAVNDAKVAGHTAILPTMQLDAGKLEGLDDDERKVMTRIVRRMWEAVGDDHVHIVTEVKARLSDDTDREFSSRSDETVSAGWKAVETGHGPEPEDEETANPAGGRNVIPSNLMEGGVIRPVGKVTVEEGETRPPKPFTEATLLAAMEHASRCVEDKSLKAALDDDESHSGGIGTPATRADTIEKLVRSKLVERKGRQLHATTEGERLTDVVEPRLKDVLLTARMEQALSDVEHGKRGPSEVMDMFHREALRIPADATANLKADAVTRTANTDAQEWGDCPRCGQPVRKTGRMWQCSTNKTEKTKDGKWATTAGCGWKMFARIAGKTITDQTARRLLAGQSVTLKGFTSKSGKKFDAAIRIDKERGTAFDFDR
>NZ_CP046514.1|WP_007054354.1|1260276_1260570_-|hypothetical-protein
MESFLSMLAGWFMGLWTWLVELNGMLQVVLVLLCVVASGVCAIIGKRMGSPMIVESGGQTWSRTLVTAIAWIAGVILMLIAVLAIAAVFAPLLGFAA
>NZ_CP046514.1|WP_080561717.1|1260775_1261153_+|hypothetical-protein
MRDMKRSILKAVRDSQRTKQDAMDEYVAARVNIKSLEGRLEEAREKATLLRRKAKDAGNTSAELKTADDLIDARWTGTEDGSAEDGSPENADPGTVNPEREHPAMEGNMEGGMPGEPNRWEGGES
>NZ_CP046514.1|WP_080575028.1|1261730_1263191_+|CHAP-domain-containing-protein
MGGLGYGCHPVPAVLDDEGNQLPDPGRRRTVIHDGSAADRQPGVQHRALADGRRQLARHRLLPGRARRVIAGQGCQRARPRSGEGRRRGVHGDLRHRIRHGPASLPDRGGRGRRAEALLVAEEHAMSRASRHRILAAMLSACLLSLLGGCTPLTVLAVLGGCKDGGSNGSSGGVTGSVTTGEVRDGMTIAQTKAWFNGSDGPDNVCQAYPDGQCTWWACMRGHKIGLDVGSYWGNGGDWAASATAAGWKTTRTDPVAGSIVSYPPGVADADTLYGHVAVVEAVDRTAGTVTISEMNGRGGLGIVNHRTHRIDVGAVYILPNGSVSTNGSAGTDSTSSGSESSDSSSSSDSSSSSDPVEAAWTCSSSDSGSTDVVVDYDGDGTHATPEQARAIARKMIASYKDWGDGDYDALVWLWNKESGWQWNATNPSSGAYGIPQALPASKLASAGDDWKDNAATQIKWGLNYIAGRYGSPSAAKTFWLAHNWY
>NZ_CP046514.1|WP_156625163.1|1264083_1265169_+|antirestriction-protein-ArdA
MDGLKDYQISVYVANLGKYVEGALQGAWITLPMPAERLQDTLKTEVGLGGRYEEYAIHDYEGGEGLLATVANPGEYESLTDLNLMCRAFEAREDDDPDVYEKVRMVRDDLDAAPRTPLQYANLALNSDEIPYRSYDAPSSAESKEAKYAWTAVNHGWASDAVRSMFDTGLGYLIDMEMYGRDLKLDGAVSLGDNGYLEDADWPSDIDGRYSREEIAEEVEWLDDFDAKTGSPAAFDLASLVQPGERIADYTISGTGTNWGAPSYQCIVEEGSTDIHAALEDTMHRIIDARAATGDAVDVLRETMGAMPAASVGEDDGVSPIDLDLGYVLPGAVTSFAERAQACDPSDPLNMTDTAGSGLSK
>NZ_CP046514.1|WP_115790998.1|1265184_1267002_+|hypothetical-protein
MALTPFDMEGVNRDLLAAGNPAKPDMQSILRRNARDLVLGNAILVSSVDAKELEFGVHMAYSDADGGFDTDPSEDVWFEASSLPIPNERPDLPPDNALRIRVTDVLTEYGFTDIDVKAPDRTPEGIWIGFEAMQPVRLDVTSAQGGRSVSFTLTAAEANDWRSGRLDAHGLSRMAVERVLARPGDTVTLAYGDSLFRPAVMCDGSGRLPEHRVKAGIGTFVIGRESEAVMPEILRIDRTVDPRDPLVIEKAFGKENDMENGNVPEYWKGLMDEADLPLAGIVREHGGGLMDFHRMKGIERLTGSSDWDFYSWTVENYDDDLLDVCERENAADVLADLQAWWKTSQPDMRQHVDEMMAGIDAAMEPLDKRLYAAAEKEFKERALDPDGECYQLDGGTFISQESFDGICGDQRDRYMAWKNQAEPARLVSAWDDPARLDRLVGDLIDADDGGGCFYTDAQPIDYTQGMDYSPQQLAADSGLGDTVPLACESNASYSLAHHPDIKFTATGSPDGRKALEVSAPGSARHALITAKPGAFDVSLHDERGIVSGESFPYEANDSWTYRLSGQALRGALDLAVGWADPQETSPETAGLGLALDDGMETTHGR
>NZ_CP046514.1|WP_156625166.1|1267041_1268073_+|hypothetical-protein
MDMNWIDEIRDPEPRKRYIYNADDYDPQYGDPYYREHSTRADSLWRLYEESGTSITFDAFADESRQTDYRMETGALRDFFNGSQSALSSYRNPMGGNPLIAFGSIGRWDGERTGISSFETFDDLMNGDDSPFKDCEIDHIWDENGILKMRGHHHDGSVEVEIRQLTDQGCEALESYEQSWAGEPFDAAGRHYDGGKESVDRFWNDLKTDRGLTVEPRYVELAFGSIGRWDGDARVRDFAERMGDEYTSLYEQDTTGIKGGDFERFGAFADNHLDFIRALTKARGMDPISSDREIGAFLNTFDKLAAMPEPTPAKQEKDELSAGACDPADPLNLEQSSSYGMTR
>NZ_CP046514.1|WP_007057623.1|1268234_1269140_+|Fic-family-protein
MPNPALTEKIRNLPPLLDSLERDAEVSDLLRRSDAARERFRQMFPLDGVEQSALEDYRKEWMARYVYNSNAIEGSTLTLEDTELVLEGEFVPTDSPARYIFAARGVADGMAYAERFAEEERTLSVEMIQKLHEVTALDMQPALRGRFRPYGYQARITATRVKTADPLEIYEDMEALVDAVNGSKDHPILKAAGFHAMFENIHPFTDGNGRTGRQILNLMLMAAGYRPVAIKHDAGRSYGKSLEAWQVDGDPKPFISQLVQCVDQEERAVAEIVGRLRENPFSENAIDGIGLEDGPARGRSL
>NZ_CP046514.1|WP_156625168.1|1269165_1269765_+|hypothetical-protein
MYMNMRFYIYSCTLICMKRSEAIDQLREMDAKYSCYVYCKNELAVVLGEQGQKLNRTLSSLVSAKALVRAARGVYVFAYSPHLGEGTLHQVAKRLRSGELVWESLESALSRWNVISQIPVDRVTFMTTGREGEFRTAYGVIEFTHCKLSWSRILPNLIARDDGLTPLASKQWAYRDLKAVGRNLDLVDMDELEDDDDWS

Crispr_ID: NZ_CP046514_5

• CRISPR_ID: NZ_CP046514_5
• CRISPR_location: 1401090-1401170
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_5

Consensus_repeat	Method
CGCACAGTGAAACCGTCTCATAT	CRISPRCasFinder

spacers of NZ_CP046514_5

>5.1|1401113|35|NZ_CP046514|CRISPRCasFinder
GTCGCCGCCGCGCGGGCAGTCTCTACCTGCAGCCA

CRISPR arrays and Neighbor proteins around NZ_CP046514_5

CRISPR arrays

The CRISPR arrays of NZ_CP046514_5

>merge|NZ_CP046514|5|1401090-1401170|CRISPRCasFinder
CGCACAGTGAAACCGTCTCATATGTCGCCGCCGCGCGGGCAGTCTCTACCTGCAGCCACGCACAGTGAAGCCGTCTCATAT

>NZ_CP046514|5|4|1401090-1401170|CRISPRCasFinder
CGCACAGTGAAACCGTCTCATAT	GTCGCCGCCGCGCGGGCAGTCTCTACCTGCAGCCA
CGCACAGTGAAGCCGTCTCATAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_014485530.1|1411495_1412779_-|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl|CDD|238434
NZ_CP046514.1|WP_007054433.1|1392699_1394253_+|UDP-N-acetylmuramyl-tripeptide-synthetase	unknown	unknown	gnl|CDD|234660
NZ_CP046514.1|WP_156625190.1|1401941_1402922_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_007054439.1|1387327_1387837_+|Cys-tRNA(Pro)-deacylase	unknown	unknown	gnl|CDD|237976
NZ_CP046514.1|WP_007052567.1|1407153_1408323_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|224094
NZ_CP046514.1|WP_007054423.1|1413984_1415109_+|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NZ_CP046514.1|WP_007052578.1|1394374_1395370_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|379214
NZ_CP046514.1|WP_007054427.1|1404869_1405391_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240032
NZ_CP046514.1|WP_065438534.1|1399226_1400816_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl|CDD|223362
NZ_CP046514.1|WP_156625187.1|1395488_1399166_-|chromosome-segregation-protein-SMC	unknown	unknown	gnl|CDD|274008
NZ_CP046514.1|WP_011068008.1|1391772_1392582_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236608
NZ_CP046514.1|WP_156625185.1|1390241_1391186_+|aldose-epimerase	unknown	unknown	gnl|CDD|185699
NZ_CP046514.1|WP_007052585.1|1389159_1390116_+|aldose-1-epimerase-family-protein	unknown	unknown	gnl|CDD|185699
NZ_CP046514.1|WP_007052563.1|1412834_1413647_-|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl|CDD|179028
NZ_CP046514.1|WP_015713723.1|1403225_1404821_+|aminopeptidase-P-family-protein	unknown	unknown	gnl|CDD|238520
NZ_CP046514.1|WP_007054435.1|1391452_1391773_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625183.1|1387876_1388935_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl|CDD|234893
NZ_CP046514.1|WP_007052566.1|1408324_1409416_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223674
NZ_CP046514.1|WP_022527697.1|1409581_1411216_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|173884
NZ_CP046514.1|WP_007052568.1|1405440_1407150_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224048

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_014485530.1|1411495_1412779_-|N-acetylglucosamine-6-phosphate-deacetylase	gnl|CDD|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	4.95091e-146
NZ_CP046514.1|WP_007054433.1|1392699_1394253_+|UDP-N-acetylmuramyl-tripeptide-synthetase	gnl|CDD|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	8.54964e-147
NZ_CP046514.1|WP_007052563.1|1412834_1413647_-|glucosamine-6-phosphate-deaminase	gnl|CDD|179028	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional.	3.28784e-125
NZ_CP046514.1|WP_007054439.1|1387327_1387837_+|Cys-tRNA(Pro)-deacylase	gnl|CDD|237976	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins. These trans-acting, single-domain proteins are homologs of ProX and also the cis-acting prolyl-tRNA synthetase (ProRS) inserted (INS) editing domain. The bacterial amino acid trans-editing enzyme YbaK is a deacylase that hydrolyzes cysteinyl-tRNA(Pro)'s mischarged by prolyl-tRNA synthetase. YbaK also hydrolyzes glycyl-tRNA's, alanyl-tRNA's, seryl-tRNA's, and prolyl-tRNA's. YbaK is homologous to the INS domain of prolyl-tRNA synthetase (ProRS) as well as the trans-editing enzyme ProX of Aeropyrum pernix which hydrolyzes alanyl-tRNA's and glycyl-tRNA's.	1.03772e-74
NZ_CP046514.1|WP_007054423.1|1413984_1415109_+|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.3133e-37
NZ_CP046514.1|WP_007052578.1|1394374_1395370_+|GNAT-family-N-acetyltransferase	gnl|CDD|379214	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions.	2.15302e-08
NZ_CP046514.1|WP_156625187.1|1395488_1399166_-|chromosome-segregation-protein-SMC	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0
NZ_CP046514.1|WP_065438534.1|1399226_1400816_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl|CDD|223362	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism].	2.00141e-130
NZ_CP046514.1|WP_007054427.1|1404869_1405391_+|NUDIX-domain-containing-protein	gnl|CDD|240032	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.82533e-56
NZ_CP046514.1|WP_011068008.1|1391772_1392582_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236608	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional.	1.73669e-71
NZ_CP046514.1|WP_156625185.1|1390241_1391186_+|aldose-epimerase	gnl|CDD|185699	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	7.67872e-132
NZ_CP046514.1|WP_007052585.1|1389159_1390116_+|aldose-1-epimerase-family-protein	gnl|CDD|185699	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR. Proteins similar to Escherichia coli YihR are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	1.72254e-124
NZ_CP046514.1|WP_015713723.1|1403225_1404821_+|aminopeptidase-P-family-protein	gnl|CDD|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	1.18395e-106
NZ_CP046514.1|WP_007052567.1|1407153_1408323_-|ABC-transporter-permease	gnl|CDD|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.94335e-82
NZ_CP046514.1|WP_156625183.1|1387876_1388935_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl|CDD|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	3.81259e-162
NZ_CP046514.1|WP_007052566.1|1408324_1409416_-|ABC-transporter-permease	gnl|CDD|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	7.77009e-104
NZ_CP046514.1|WP_022527697.1|1409581_1411216_-|ABC-transporter-substrate-binding-protein	gnl|CDD|173884	cd08519, PBP2_NikA_DppA_OppA_like_20, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold. This CD represents the substrate-binding domain of an uncharacterized ATP-binding cassette (ABC) type nickel/dipeptide/oligopeptide-like transporter. The oligopeptide-binding protein OppA and the dipeptide-binding protein DppA show significant sequence similarity to NikA, the initial nickel receptor. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP046514.1|WP_007052568.1|1405440_1407150_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0

Protein sequences

>NZ_CP046514.1|WP_065438534.1|1399226_1400816_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MRDVELDIMSRPPEHNTTNLDLDRMNLMLDILGHPEQSFRVIHITGTNGKGSTARMAEAICRAYGMRTGLYTSPHLEKINERIAIDGQQLSDDDFIDIWDQTKDLVALVDAKMEEQGKPKMSFFEVLTAMAIWKFADTPVDVAIVEVGMGGLWDATNVLNADAAIIGPVDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEEAVMPILAEAAERNHAMLVRDGYEMTASDRMAAVGGQVATLTTPNGTYEGVPIAKFGEHQAHNALAALAASEVVIPVNGPLDGDLVAEALSSVKIPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFKQLVGVVAMMRDKQVEEYLGVLEPILSSVVVTENSWRERVMPADELEKIAVDVFGRDRVIKEANLPDAIQTAVNMVDAEDELGVGYGHGVLICGSFVTAGDARLMLEEHASPTMRQAMAVHQPAVDPDDSDQPADKAEDEAADNLEDSVSPDDFDVFDVLGLGKEQASDAGNAGTGTASADTDTDDSADAR
>NZ_CP046514.1|WP_156625187.1|1395488_1399166_-|chromosome-segregation-protein-SMC
MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALIWVMGEQGAKNLRGTSMEDVIFAGTSSRPPLGRAQVSLTIDNSDHTLDIDYTEVTISRTIFRNGGSEYAINGSQCRLLDIQELLSDTGLGQQMHVIVGQGRLDAILKADPSGHRAFIEEAAGILKHRKRKERALRKLANTETNLSRLDDLLGEIHRQLGPLGRQARISRRADAIQISVRDAQARLYAEDAQRSMSRRDTVRQELGDVRNQLAVAQRELAQVKVRIEQVEALSSESSPAIAKANQYWHEFSQTRERLNALAQLAEERSRSLAGQIVTNFGEDPGMLVKRAEELESQAATQTKAVADARIALDKATEERADDEKKLASVRQTLTELRKTAQERDAQIARLRELIAREESAVQLATSRAKDYASQRDSLTSQRDDARQQLDALRSEADSIADDDGAALDAARATLAECRERLNERADKQREIQSKIISLKSKADALADTLDSRNASGSLERDTDVASLGRLTDFIHVAEGWEEAVAHALDQYASAIVVPAAGNMLHALERAREDKLGKAVVLTASIAGDPATEPGTESEESSAENAGAAPQSGNALAALVTANPDAENPAQAEAVVRTVRLLLADVAAAGTADEAQQIVAFGEAMRAVTKNGETFTHGVAAVGGSSISQSDLSLAARRDKALAQVKQLTAQDGGMAEQVAEAKTKRDEAARLVDQESAKRTEARLKAQQAEKSLKSATDRVASFTRQLEQLDRKITETQENRNEHQLKLDDLNRALASARQSTAEHADFDELDERERTLERELNLTREHEVAAKIAWTEASRKGESLSRQAGLLRDNAKETAERRARIEALNDRRREQAAHLQGVADDARAVAAMVEHTLHDVAAKRDELQAAASSHDEELKALRAQRNQIEPKVTDLTGREHALDVNRERLAAESGQLMQKVSDELGLTLEELVSDYGPEQPVPVLDDEGNPVPLDETEAEAETEEGETGGETGTNGDSDRFKTVPYNRQEQKKRLDKARRDLAALGKINPLATEEFEALEERNKYLNDQRNDVVKSRDDLMQLIKDLDSTMVQVFKSAFDDTAEAFEQMFATLFPGGTGRLRLENPEDMLTTGVLVEASPAGKRVKQLSLLSGGERSLTALALLFAIFTARPSPFYVMDEVEAALDDVNLTRLINAFNELRAHAQLIIITHQQRTMSIADALYGVTMRADGVTAVVSQKLER
>NZ_CP046514.1|WP_007052578.1|1394374_1395370_+|GNAT-family-N-acetyltransferase
MITLEKVDGATLEAEAEKAGITLPIEQTKVWSGFQADIDGRTPWGNYLIKRDGELVAVISFIDFETHGYHYLRSMHGPAWVAKPTEAEEREVVDAIVDTVKKADKSIAFLRIDTWFADGTEKVLSTVPYDQTVVIDITGGDDEILARMKRRGRRDVRKSLRECPAEVADETDKALTDFSEYYDVMVETGQRDGFTPAPMSDYSDMIGALGADHCRVFAARIEDRVVAWSIVTVNGTHAVRYYAGMRNEVMRLHVTDKLLYSECCILGSQGITEYDLMGIGSDFAPSLKGLNEFKCKFTEEITPVAPARDVPIKKVFYKTLQTVQGVRKALR
>NZ_CP046514.1|WP_007054433.1|1392699_1394253_+|UDP-N-acetylmuramyl-tripeptide-synthetase
MALTLASAADLLKEHHLLREIIQGDVWTDDPARIASADEPFAGITYDTRKVTPGTLLCCKGQFKAEYLNGIDEAGLAAYVAETEYSAATATPGLIVNDARKAMSLLSAAFYGYPQNELTVIGVTGTKGKTTTSYFTQALINAVSGGKAALFSSVDNCLDGHTYVESDLTTPESMDAFRMMREAADNGMKYLVMEVSSQAYKVDRVYGLTFDVAAFLNISPDHISPIEHPTFEDYLYCKRQIIVNAKSLVLGADSLHADLLREDAEAAGIGVTTFALHDADNAGTSADVVAWPADPAHASFHIADGDQALGDYHLSIDGDFNYLNAAAAIAIAHAVGVSLDDADALHAIESVRIAGRMEQFRDPQSNTLAIVDYAHNYASVTALLDFVYERWGEENPRITLVTGSAGNKAYDRRKEIVEAAENRIANFIFTAEDTDTEPIIDICMEMQGYITNKDVVSTVISDRLTAITNAIYDARAHADRFNILLIIGKGNERWIKDHRKHVPFDGDDHVVERMFGL
>NZ_CP046514.1|WP_011068008.1|1391772_1392582_-|sigma-70-family-RNA-polymerase-sigma-factor
MTTSEATMQSGQSAGSGESMAAKRARFEQLAMPAVNALYRQAMRLTNDPDDAQDLVQDTFERGFKAFDSFQPGSNFEAWMTTIERNAYFNQYAKAKRRPQRANDSTGEYDDWDIYDAAEHTSDGLKSAEEEYLDAFAPEEIMAALAKLSPERRQVFIDAAIDGKSYQQVADEQGVKIGTVMSRLNRARTQLKRELASYAKERGYVTGSSAGSPSAKLGENVGRIADSGHNGSSEQTVGSNGDTQAAVRHSHATGARTPQQSSKLSGKEI
>NZ_CP046514.1|WP_007054435.1|1391452_1391773_-|hypothetical-protein
MNDQPVERTRHISITRTGADGMVSQTEVHITAVHHRSVDTGSASASVQADVHIVTEGDCFDPRTCCDEREQALIAALRAYLRPDVAPECLIARLKATLDHCCGEDK
>NZ_CP046514.1|WP_156625185.1|1390241_1391186_+|aldose-epimerase
MALKPRTGNQYVISSGEWSAVVTELGASLRELKWRGEDLIVPFDPNKVIPCCNGWVLAPYPNRVTNGQYSFDGEDYQMPIDEFDRQSSLHGYAYRYMWELEDLQESHVTLSWRSPDIAGYPFDITITATYALDENGLTETFTVHNNDSVKAPWAFGIHPWLANGKHATGQAITADNELCRLELHCDTHVTVDEHLLPTGEEPVSGIFDLRDNPTLEGRGFDDAWTDITNRGEDGSTSAVFTRPDGIKVTLTGDKTINSWQVCTGNEIGEKARQAGVAVEPMTAYADAFRTGKDLVVLEPGDDYTTVVTFHAEQI
>NZ_CP046514.1|WP_007052585.1|1389159_1390116_+|aldose-1-epimerase-family-protein
MTSKTPRTGNQYSIHYGDYSAVICELGAKIRRFDYQGKEIFCPFGVNDLTPTCNGYVLAPWPNRIENGEYDFNGKHYCAPVNEYHPAPRNNANHGYAYHYMWKLESLTDSAVTLSLRFPNLDGYPFDVTVTVTYELGDNGMTATVNARNDGDEPAPWALGLHPWLANGKQGATAAERDADSAACHLQIKAASHVTVNEALIPTGTEPVTGIYDLNDGPTLEGRAFDDAWVDVERAADGATTTTFTRPDGIEVKIIGDETINAWQCYTATGAPFAEHPYGIAVEPMTAPANAFRTGDHLVTLAPNGDYTTVVRYEAVQK
>NZ_CP046514.1|WP_156625183.1|1387876_1388935_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MTADSCNPCLTLENTIDVQEVPMTKSVVLADPRGFCAGVDRAILTVQTILKAAEASGKRTREDGLPPVYVRRQIVHNKHVVEDLAGQGAVFVQELAEIPDAAAQAGIPVVFSAHGVSPVVKAEAERRGMHVVDATCPLVGKVHREVLRFVREGYEIVYIGHKGHDEAVGVVGENPEHVHLIEHESDVDSLDFAPDNKLVLLSQTTLSVDETAGTIAALKAKFPWIQEPPSSDICYATSNRQAAVKLVAQQSDCVVIVGSANSSNSVRLMEVAQEGLGERGKAYRVDDASELDPAWFEGLESVGISSGASVPDELVSGVIDALQNLGFTGMKSVETIKENMHFVLPAELRRKK
>NZ_CP046514.1|WP_007054439.1|1387327_1387837_+|Cys-tRNA(Pro)-deacylase
MAKKSKHDKGAGSTPATVQLEKAGVEFHVYEYEHSNDHMDDGYGVEAATKLGFDEHQVFKTLMADTGAERVVGVVPVSGHMDLKALAAAVGAKKASMADPKVAMRESGYVVGGISPLGQKTRHKTVLDESALQFDQILVSGGKRGLSVGVNPQDLLKVLNAVAAPIGTW
>NZ_CP046514.1|WP_156625190.1|1401941_1402922_+|hypothetical-protein
MKTHKAVTSLISAAQNELRCVYSRNEAEQTALRRRAQSGELLKVYDGIPSLYANTAYWDGLTPPERTLHMARALAQEHPQWVFGGLVAVSAYGFEHQWHLHDGCITIVTSDHGSRQRHQRLRHVYMPDMNNPKTHYEASGLSLISPARTLVEAAIDLDFRFALPIFDSALAKGITKEEIAADCVQWRIDYARVFRLLRYANERSENGGESLARGTIIEDRFLTPRIQVTVTDPQTNTEYRVDFVWKLDDGRVIVAEYDGTQKYVDPAMTDNRSIQEVVAKERARDEGLKRAGATEIIHFTYADVIERTPLRVKLIKAGVPQVETSA
>NZ_CP046514.1|WP_015713723.1|1403225_1404821_+|aminopeptidase-P-family-protein
MGEVITAKDKEYEAEERATAPGANQSMSDRVNNRSLRPQSAAFKEFMKSGWADDDPEINPLESSKFTPARLEALGKAFPGERLVIPAGQPKVRNNDCDYMFRPDTTFAYYTGLGSDYEAGAVLVLNPVDPDSPEAAAGKTHTPELFVAPRADNSTEDFFMSAHYGEYWVGPRAGLKEMQAMTGIETHDIAQLADALSKDVGAEAGAVRVRVVSETDPQITSMVESIRKANGFADPDKNSASDDKLHEFAAEARMVKDGYEINEMRKAVDATKHGFDRLLSALPAALDKPRSERILEGAFNAVSRELGNAVGYDSIVASGPHAPILHWMRNTGVVKTGDMLLVDAGVEVDSLYTADITRTFPTNGKFTDFQKRLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAERLHDWGLLPVSVEESLSPQGQQHRRWLACGVAHHLGLDVHDCAQARFESYQGAKITPGMIFTIEPGLYFREDDLLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKQIDDVEAWMAEQAAQAK
>NZ_CP046514.1|WP_007054427.1|1404869_1405391_+|NUDIX-domain-containing-protein
MSTPEFVLELRKKIGHDLLWLNGVTGCVLNEHGQLLLGRRSDTGEWAMVYGINEPGEQPADTVVREIKEETGIDALVTDLVAVTSSDKVLTYANGDNTMYMDHSFLCALKPGGNAEPFVGDEESLSVGWFDLDDLPTPLAASTSERLELFHTYIENKKHGDAHALFQFDGQQY
>NZ_CP046514.1|WP_007052568.1|1405440_1407150_-|ABC-transporter-ATP-binding-protein
MSENNKNLADIKDLSVSFMTDAGSIKAVEDVNFTIPRKTVVGVVGESGSGKSVTARSIIKLLPETATTSGAVYLSKRDGSDSLDVLSLSGEQLREVRGSEAAMVFQEPNSVLNPVYTIGWQIEEGLRAHGMKDKKELRAKAINILKKVGIPDAETRVDYYPHQFSGGQKQRIVIAMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQVVVMYRGHVVEQGDVEQIFYHPKDDYTKRLLGAVPRIGQKLVVRDREGKPIERKADWREQPIAVEAKNLTITYPGHLMQPDFKAVDGANFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSLNVLGIEMNGVKERDFKPKRADIGFVFQDPGSSFNPLMTIAENVAEPLLVHHKYGSVADAKNYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARGLALKPSLLIADEPTSALDVSVQAKVLELFKRLQAEIGFACLFITHDLAVVDMLADRIMVMHKGQIVEHGDADQIMQHPENPYTKKLLASLPVPDPREQQQHRAHLHELLAQEA
>NZ_CP046514.1|WP_007052567.1|1407153_1408323_-|ABC-transporter-permease
MTTASQDKITVPGDDRLTKLNVSTKTPFWTKIPIIKELRVAVGWQKGMLITGLAITAFFLLVALFAPLIAPYGHAQIKAADGTSFPAQAAPSAEHIWGTTAAGFDVFSRVVWGARTAVIAIVVAVLLSIFAGVLLGLVSGYYGGWVDRILVMIADAVYSFPSLLLAILMAIMISHGQSGLWSGILASGISITVVYIPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLFKNSTRTLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRSVSDVTAGIWWTAVFPGIAIVLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPNEKPTARNEVIAELDANVDPPATVTDHDPTIVASEWTGEGKPEGKE
>NZ_CP046514.1|WP_007052566.1|1408324_1409416_-|ABC-transporter-permease
MSDSAIATSSTTPAKAKTKKNRLSGSFFRFVLTRFLLIIPTVFILVTIVFFVMRATGDPISAALGGRLTPAELQQRIHAAGYDRPLIVQYVDYLGGLLHGDLGTTLTDNQPVISILTHYGAATFELAFLALIVALIVGIGLGRLAARKRDRAADAGIRTFAILCYATPVFFLGLVLKLIFAVWLNILPASGRSDLNSEMQFTRLVSPTGFYIIDAIQLGDMNVLVDVLRHAVLPAVALGLLTAGVFIRLVRTNVISTYNSGYVEAARSRGVSEKRLLNKHAWRPALIPIITVMGMQIALMLAGAVLTETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAIIVAVVNFLVDVIAALIDPRVRY
>NZ_CP046514.1|WP_022527697.1|1409581_1411216_-|ABC-transporter-substrate-binding-protein
MNSKKILAAAVSVAAIASLTACGGVKDDTAAGADSGNAITIGTTDKITSLDPAGSYDNGSYAVQIQVFPFLYAQDYNTSELSPDIAADDGTWNDDGTEFTVKLKDGLKFANGNDLTAADVKFSYDRIKKINDPNGPSSLLANVESVTAKDDTTVVFKDSVPFDVTLKQVMSSPAGPIVDEDTFDADKLTDADTIVSKKAFAGPYTLTAFKINESAAYAKNDSYKGLTPAKNSAVQVKYFADASNLKMAVQQGQVDVAYRSLSPTDIEDLSKDSKVKVVKGPGGEERFIAFNFKIQPYGESQPDADANKAKAVRQAVANLIDREELATKVYKGTYTPMYSFIPDGLAGHDDTLKSAYGDGNGKPSTEKAKKVLADAGVTTPVDLKLQYNSDHYGSASADEYAALKSQLEEGGLFKVDMQSTEWTQYNKDRVVTDDSDGVYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEVNDLIVKQAGEKDESARGDILKQIQKLETEDLSTIPLLQGAQVAVTGTSVKGVTLDASFRFRYASVTKG
>NZ_CP046514.1|WP_014485530.1|1411495_1412779_-|N-acetylglucosamine-6-phosphate-deacetylase
MSDRNEIVSRVTAALEGKPAPVAIRNARKVDARGERRGYWVVSDAAGVIVAAGTGEETFEHYCRTVGLDPADRNAVIDAEGRILTPGYVDIHAHGAWEKSFDDGPDGIDVARAGHAVHGTTRQVLSLITNPVDVICRNIRTVRATMESGRPDILGCHLEGPFLALARKGAHDPECLKDPVPDIVDKMLEASGADPASGKLGCIRQITIAPELPHGISAIRQFAAAGVVPAVGHCDADYETAKAGFDAGAGIMTHMFNAMNGLHHREPGPIPAAVEDPRVTIELINDGFHVQDPMVSLSFRFAPHRTAFVTDAMAATDCPDGAYKLGALDVNVVGGHARLVSNGAIAGSTLLLEVAVRRAVCELGFSPVDAVEAATLTPAKAFGFDRPNPVTGAPIGLIAPGFAADFNLADPADWTVEQVWCAGRKLK
>NZ_CP046514.1|WP_007052563.1|1412834_1413647_-|glucosamine-6-phosphate-deaminase
MPEIIIVKNEAEAGEIYGRCVADLIKAKPDAVLGLATGSSPLAAYQALAKIVKDEAIDVSGVRGFALDEYIGLPLTHPESYHATIHRTVVEPLGLDPAKVHVPGDVLNGTPLEDGDKVALAGPAYDRAIEAAGGIDVQILGIGTDGHVGFNEPGSSLASGTRVKTLAEQTRIDNARFFDNDINQVPTHCITQGIGTIMKARHLVLLAFGAGKAEAIEETVEGGVSAFCPASALQMHPHATIIVDEEAASRLRHKDYYRYAYTHKPAWQGI
>NZ_CP046514.1|WP_007054423.1|1413984_1415109_+|ROK-family-transcriptional-regulator
MSYLGLNTTTDDHAAKASPADVRRKNRQLIFRLLFPTNQYSRAELGRRTGLSRVAVSDVVGRMLEEGLLRETGQAPSGGKGKRGTLLSIDIDRLRIISIDLTQEHLLHGAVTNLLGQPLRHAEVTLNTGSFVSVDVIIELIEKMLGMSDGEVIGIGVASPGVVDNGVVRSSTMRGWNNLDLSTPIAEHFGLEVNVSNDATAAMLTERFFGQGGPNMLFVRIERGIGSAILLSDTPVIGELHAAGELGHISIDLDGPLCPCGKHGCLETMISGTALKKQLSAADVEQHQGILARAGRYLGQALSMPVGLLDMADVCVYGQPNIINETFIDAAQQYLDAATSSSFHKHTVIRRCECGPDITVQGEAIAVVFQHLAK

Crispr_ID: NZ_CP046514_6

• CRISPR_ID: NZ_CP046514_6
• CRISPR_location: 1663110-1667617
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 62 spacers
• Cas_protein_info: cas2,cas1,csb3,cas3,csb2gr5,cas7

Consensus repeat of NZ_CP046514_6

Consensus_repeat	Method
NTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CRT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CRISPRCasFinder
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	PILER-CR

spacers of NZ_CP046514_6

>6.1|1663146|36|NZ_CP046514|CRT
GCCAGAGTGTAAGAGTTTTCTTTCATGCCTCACACT
>6.2|1663218|35|NZ_CP046514|CRT,CRISPRCasFinder
GTCAGCATATGCCACGACGAGCTAGCCCCCACCAA
>6.3|1663289|35|NZ_CP046514|CRT,CRISPRCasFinder
TTGGCTTTTTTGTATCGCAATACGCCTATCTCATG
>6.4|1663360|35|NZ_CP046514|CRT,CRISPRCasFinder
ATACCGTCCAACGGGATGCGATACAACGGCATGTC
>6.5|1663431|37|NZ_CP046514|CRT,CRISPRCasFinder
TACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAG
>6.6|1663504|35|NZ_CP046514|CRT,CRISPRCasFinder
TGATGGACACAGAACCAAGTATGACCGATGTTGCG
>6.7|1663575|36|NZ_CP046514|CRT,CRISPRCasFinder
GCCGGGCGGGACGACAATCATGTGCAGACGCGCGCC
>6.8|1663647|35|NZ_CP046514|CRT,CRISPRCasFinder
CTCGACAACGACGGGAACATGCACATCGCACTCGC
>6.9|1663718|37|NZ_CP046514|CRT,CRISPRCasFinder
GCCGATTCGTCGGCATATCCGGCTGCTGGATTACCGA
>6.10|1663791|35|NZ_CP046514|CRT,CRISPRCasFinder
CTCAAGTTTGGATATTGTTGCATGGTGCAACTGTT
>6.11|1663862|36|NZ_CP046514|CRT,CRISPRCasFinder
ACCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTA
>6.12|1663934|35|NZ_CP046514|CRT,CRISPRCasFinder
CCGGTTGTCCTTTGACTTGACTACGTGGTCGATGA
>6.13|1664005|35|NZ_CP046514|CRT,CRISPRCasFinder
CACTCATACCCTGTGACTTGGTACTGGTGACCGTA
>6.14|1664076|36|NZ_CP046514|CRT,CRISPRCasFinder
GCCGATACGATTTACGAGGATGTCGATGAACTGGTT
>6.15|1664148|37|NZ_CP046514|CRT,CRISPRCasFinder
TGCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAAC
>6.16|1664221|35|NZ_CP046514|CRT,CRISPRCasFinder
AACCGCAAGAGAAAGAAACGTGGATTCGACAACAT
>6.17|1664292|37|NZ_CP046514|CRT,CRISPRCasFinder
CGCCGCACGGCAACGGCAGCATGGACCGTTGGAACGC
>6.18|1664365|38|NZ_CP046514|CRT,CRISPRCasFinder
GACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGG
>6.19|1664439|37|NZ_CP046514|CRT,CRISPRCasFinder
GAAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTT
>6.20|1664512|37|NZ_CP046514|CRT,CRISPRCasFinder
TACTCCTGTTCACGCCACCCCATACGCCCTGTAACGG
>6.21|1664585|36|NZ_CP046514|CRT,CRISPRCasFinder
GTCATGCACTAATAAGGTGTATGGCCCTACTATTAT
>6.22|1664657|36|NZ_CP046514|CRT,CRISPRCasFinder
TCCGTAACCAGAACACCCGGGTCGGTGCCCAATGTT
>6.23|1664729|35|NZ_CP046514|CRT,CRISPRCasFinder
CCGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTC
>6.24|1664800|35|NZ_CP046514|CRT,CRISPRCasFinder
TTCTCGCTGATGGGCATCTGGACCACCGCCGACGA
>6.25|1664871|35|NZ_CP046514|CRT,CRISPRCasFinder
TACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGA
>6.26|1664942|36|NZ_CP046514|CRT,CRISPRCasFinder
TATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGA
>6.27|1665014|38|NZ_CP046514|CRT,CRISPRCasFinder
CCCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGC
>6.28|1665088|37|NZ_CP046514|CRT,CRISPRCasFinder
CGTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGA
>6.29|1665161|40|NZ_CP046514|CRT,CRISPRCasFinder
CGCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGG
>6.30|1665237|36|NZ_CP046514|CRT,CRISPRCasFinder
TTCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTT
>6.31|1665309|37|NZ_CP046514|CRT,CRISPRCasFinder
CGCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGG
>6.32|1665382|34|NZ_CP046514|CRT,CRISPRCasFinder
ATCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGC
>6.33|1665452|36|NZ_CP046514|CRT,CRISPRCasFinder
GGTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTC
>6.34|1665524|36|NZ_CP046514|CRT,CRISPRCasFinder
GCTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCA
>6.35|1665596|36|NZ_CP046514|CRT,CRISPRCasFinder
GATTCTGCCATGCCCTACGCCGTTACCTTCCAGCAT
>6.36|1665668|38|NZ_CP046514|CRT,CRISPRCasFinder
TTGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAAC
>6.37|1665742|36|NZ_CP046514|CRT,CRISPRCasFinder
AAGACTGCTGCAAGACGAGATGGACCGAATGGAGGA
>6.38|1665814|37|NZ_CP046514|CRT,CRISPRCasFinder
CATCTCAGTCCAATTGCAACCATACGGTCGGGACTCC
>6.39|1665887|36|NZ_CP046514|CRT,CRISPRCasFinder
TCACACTGCCTGTCACGTGCCGGAAACTCGAACTGC
>6.40|1665959|35|NZ_CP046514|CRT,CRISPRCasFinder
GTCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCC
>6.41|1666030|35|NZ_CP046514|CRT,CRISPRCasFinder
AAGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTG
>6.42|1666101|37|NZ_CP046514|CRT,CRISPRCasFinder
GAATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAG
>6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder
TTGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGT
>6.44|1666245|36|NZ_CP046514|CRT,CRISPRCasFinder
GGGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTG
>6.45|1666317|36|NZ_CP046514|CRT,CRISPRCasFinder
GATTACTTTATCCGCAGACATCACATATCCAGTCAA
>6.46|1666389|36|NZ_CP046514|CRT,CRISPRCasFinder
TTAGTGAGCTGTTTGGCGAAACAGAAACAATGTGAT
>6.47|1666461|35|NZ_CP046514|CRT,CRISPRCasFinder
AACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGC
>6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder
CTGGACGGCGAGATCGTCAAGCTCACGACGAACAT
>6.49|1666603|37|NZ_CP046514|CRT,CRISPRCasFinder
TGCAATGGGCGTTGACGTATTCGACACGCTGGACGAA
>6.50|1666676|36|NZ_CP046514|CRT,CRISPRCasFinder
GGGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTC
>6.51|1666748|36|NZ_CP046514|CRT,CRISPRCasFinder
AACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGT
>6.52|1666820|35|NZ_CP046514|CRT,CRISPRCasFinder
CCCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGA
>6.53|1666891|36|NZ_CP046514|CRT,CRISPRCasFinder
GATGTTGGTGCGCCCGGTTCCAGTGCGCATATATAT
>6.54|1666963|37|NZ_CP046514|CRT,CRISPRCasFinder
CTCTCAGGCATATGGCGACACGTGGCAGGAAATCGCC
>6.55|1667036|37|NZ_CP046514|CRT,CRISPRCasFinder
CGCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGG
>6.56|1667109|36|NZ_CP046514|CRT,CRISPRCasFinder
CGGATCTGCCTGTAGGTCTGCGGAGCAGACGACGAT
>6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder
CCCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCA
>6.58|1667254|36|NZ_CP046514|CRT,CRISPRCasFinder
GGTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAA
>6.59|1667326|37|NZ_CP046514|CRT,CRISPRCasFinder
GACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCA
>6.60|1667399|38|NZ_CP046514|CRT,CRISPRCasFinder
GGTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTC
>6.61|1667473|36|NZ_CP046514|CRT,CRISPRCasFinder
GCCACCGTGCCACGGCCACCGGCCTTGAACGGTATG
>6.62|1667545|37|NZ_CP046514|CRT,CRISPRCasFinder
CCATGAGCCGCGCAATCACGCCATTGGAGCCGACCAC
>6.63|1663219|35|NZ_CP046514|PILER-CR
GTCAGCATATGCCACGACGAGCTAGCCCCCACCAA
>6.64|1663290|35|NZ_CP046514|PILER-CR
TTGGCTTTTTTGTATCGCAATACGCCTATCTCATG
>6.65|1663361|35|NZ_CP046514|PILER-CR
ATACCGTCCAACGGGATGCGATACAACGGCATGTC
>6.66|1663432|37|NZ_CP046514|PILER-CR
TACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAG
>6.67|1663505|35|NZ_CP046514|PILER-CR
TGATGGACACAGAACCAAGTATGACCGATGTTGCG
>6.68|1663576|36|NZ_CP046514|PILER-CR
GCCGGGCGGGACGACAATCATGTGCAGACGCGCGCC
>6.69|1663648|35|NZ_CP046514|PILER-CR
CTCGACAACGACGGGAACATGCACATCGCACTCGC
>6.70|1663719|37|NZ_CP046514|PILER-CR
GCCGATTCGTCGGCATATCCGGCTGCTGGATTACCGA
>6.71|1663792|35|NZ_CP046514|PILER-CR
CTCAAGTTTGGATATTGTTGCATGGTGCAACTGTT
>6.72|1663863|36|NZ_CP046514|PILER-CR
ACCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTA
>6.73|1663935|35|NZ_CP046514|PILER-CR
CCGGTTGTCCTTTGACTTGACTACGTGGTCGATGA
>6.74|1664006|35|NZ_CP046514|PILER-CR
CACTCATACCCTGTGACTTGGTACTGGTGACCGTA
>6.75|1664077|36|NZ_CP046514|PILER-CR
GCCGATACGATTTACGAGGATGTCGATGAACTGGTT
>6.76|1664149|37|NZ_CP046514|PILER-CR
TGCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAAC
>6.77|1664222|35|NZ_CP046514|PILER-CR
AACCGCAAGAGAAAGAAACGTGGATTCGACAACAT
>6.78|1664293|37|NZ_CP046514|PILER-CR
CGCCGCACGGCAACGGCAGCATGGACCGTTGGAACGC
>6.79|1664366|38|NZ_CP046514|PILER-CR
GACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGG
>6.80|1664440|37|NZ_CP046514|PILER-CR
GAAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTT
>6.81|1664513|37|NZ_CP046514|PILER-CR
TACTCCTGTTCACGCCACCCCATACGCCCTGTAACGG
>6.82|1664586|36|NZ_CP046514|PILER-CR
GTCATGCACTAATAAGGTGTATGGCCCTACTATTAT
>6.83|1664658|36|NZ_CP046514|PILER-CR
TCCGTAACCAGAACACCCGGGTCGGTGCCCAATGTT
>6.84|1664730|35|NZ_CP046514|PILER-CR
CCGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTC
>6.85|1664801|35|NZ_CP046514|PILER-CR
TTCTCGCTGATGGGCATCTGGACCACCGCCGACGA
>6.86|1664872|35|NZ_CP046514|PILER-CR
TACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGA
>6.87|1664943|36|NZ_CP046514|PILER-CR
TATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGA
>6.88|1665015|38|NZ_CP046514|PILER-CR
CCCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGC
>6.89|1665089|37|NZ_CP046514|PILER-CR
CGTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGA
>6.90|1665162|40|NZ_CP046514|PILER-CR
CGCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGG
>6.91|1665238|36|NZ_CP046514|PILER-CR
TTCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTT
>6.92|1665310|37|NZ_CP046514|PILER-CR
CGCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGG
>6.93|1665383|34|NZ_CP046514|PILER-CR
ATCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGC
>6.94|1665453|36|NZ_CP046514|PILER-CR
GGTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTC
>6.95|1665525|36|NZ_CP046514|PILER-CR
GCTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCA
>6.96|1665597|36|NZ_CP046514|PILER-CR
GATTCTGCCATGCCCTACGCCGTTACCTTCCAGCAT
>6.97|1665669|38|NZ_CP046514|PILER-CR
TTGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAAC
>6.98|1665743|36|NZ_CP046514|PILER-CR
AAGACTGCTGCAAGACGAGATGGACCGAATGGAGGA
>6.99|1665815|37|NZ_CP046514|PILER-CR
CATCTCAGTCCAATTGCAACCATACGGTCGGGACTCC
>6.100|1665888|36|NZ_CP046514|PILER-CR
TCACACTGCCTGTCACGTGCCGGAAACTCGAACTGC
>6.101|1665960|35|NZ_CP046514|PILER-CR
GTCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCC
>6.102|1666031|35|NZ_CP046514|PILER-CR
AAGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTG
>6.103|1666102|37|NZ_CP046514|PILER-CR
GAATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAG
>6.104|1666175|35|NZ_CP046514|PILER-CR
TTGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGT
>6.105|1666246|36|NZ_CP046514|PILER-CR
GGGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTG
>6.106|1666318|36|NZ_CP046514|PILER-CR
GATTACTTTATCCGCAGACATCACATATCCAGTCAA
>6.107|1666390|36|NZ_CP046514|PILER-CR
TTAGTGAGCTGTTTGGCGAAACAGAAACAATGTGAT
>6.108|1666462|35|NZ_CP046514|PILER-CR
AACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGC
>6.109|1666533|35|NZ_CP046514|PILER-CR
CTGGACGGCGAGATCGTCAAGCTCACGACGAACAT
>6.110|1666604|37|NZ_CP046514|PILER-CR
TGCAATGGGCGTTGACGTATTCGACACGCTGGACGAA
>6.111|1666677|36|NZ_CP046514|PILER-CR
GGGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTC
>6.112|1666749|36|NZ_CP046514|PILER-CR
AACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGT
>6.113|1666821|35|NZ_CP046514|PILER-CR
CCCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGA
>6.114|1666892|36|NZ_CP046514|PILER-CR
GATGTTGGTGCGCCCGGTTCCAGTGCGCATATATAT
>6.115|1666964|37|NZ_CP046514|PILER-CR
CTCTCAGGCATATGGCGACACGTGGCAGGAAATCGCC
>6.116|1667037|37|NZ_CP046514|PILER-CR
CGCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGG
>6.117|1667110|36|NZ_CP046514|PILER-CR
CGGATCTGCCTGTAGGTCTGCGGAGCAGACGACGAT
>6.118|1667182|37|NZ_CP046514|PILER-CR
CCCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCA
>6.119|1667255|36|NZ_CP046514|PILER-CR
GGTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAA
>6.120|1667327|37|NZ_CP046514|PILER-CR
GACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCA
>6.121|1667400|38|NZ_CP046514|PILER-CR
GGTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTC
>6.122|1667474|36|NZ_CP046514|PILER-CR
GCCACCGTGCCACGGCCACCGGCCTTGAACGGTATG
>6.123|1667546|37|NZ_CP046514|PILER-CR
CCATGAGCCGCGCAATCACGCCATTGGAGCCGACCAC

CRISPR arrays and Neighbor proteins around NZ_CP046514_6

CRISPR arrays

The CRISPR arrays of NZ_CP046514_6

>merge|NZ_CP046514|6|1663110-1667617|CRT,CRISPRCasFinder,PILER-CR
ATGCGGAACAAAAAACCAGGTCACATCATATGCAAGGCCAGAGTGTAAGAGTTTTCTTTCATGCCTCACACTCCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGTCAGCATATGCCACGACGAGCTAGCCCCCACCAATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTGGCTTTTTTGTATCGCAATACGCCTATCTCATGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGATACCGTCCAACGGGATGCGATACAACGGCATGTCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTGATGGACACAGAACCAAGTATGACCGATGTTGCGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGCCGGGCGGGACGACAATCATGTGCAGACGCGCGCCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCTCGACAACGACGGGAACATGCACATCGCACTCGCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGCCGATTCGTCGGCATATCCGGCTGCTGGATTACCGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCTCAAGTTTGGATATTGTTGCATGGTGCAACTGTTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGACCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCGGTTGTCCTTTGACTTGACTACGTGGTCGATGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCACTCATACCCTGTGACTTGGTACTGGTGACCGTATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGCCGATACGATTTACGAGGATGTCGATGAACTGGTTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTGCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAACTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGAACCGCAAGAGAAAGAAACGTGGATTCGACAACATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGCCGCACGGCAACGGCAGCATGGACCGTTGGAACGCTCCTCAATGAAGTGCATACATTTTGACGTATGCAAGGACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGAAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTACTCCTGTTCACGCCACCCCATACGCCCTGTAACGGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGTCATGCACTAATAAGGTGTATGGCCCTACTATTATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTCCGTAACCAGAACACCCGGGTCGGTGCCCAATGTTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTCTCGCTGATGGGCATCTGGACCACCGCCGACGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGATCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGGTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGCTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGATTCTGCCATGCCCTACGCCGTTACCTTCCAGCATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAACTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGAAGACTGCTGCAAGACGAGATGGACCGAATGGAGGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCATCTCAGTCCAATTGCAACCATACGGTCGGGACTCCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTCACACTGCCTGTCACGTGCCGGAAACTCGAACTGCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGTCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGAAGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGAATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGGGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGATTACTTTATCCGCAGACATCACATATCCAGTCAATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTTAGTGAGCTGTTTGGCGAAACAGAAACAATGTGATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGAACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCTGGACGGCGAGATCGTCAAGCTCACGACGAACATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGTGCAATGGGCGTTGACGTATTCGACACGCTGGACGAATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGGGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGAACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGTTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGATGTTGGTGCGCCCGGTTCCAGTGCGCATATATATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCTCTCAGGCATATGGCGACACGTGGCAGGAAATCGCCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCGGATCTGCCTGTAGGTCTGCGGAGCAGACGACGATTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGGTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCATCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGGTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTCTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGGCCACCGTGCCACGGCCACCGGCCTTGAACGGTATGTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAGCCATGAGCCGCGCAATCACGCCATTGGAGCCGACCACTCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG

>NZ_CP046514|6|1|1663110-1667617|CRT
ATGCGGAACAAAAAACCAGGTCACATCATATGCAAG	GCCAGAGTGTAAGAGTTTTCTTTCATGCCTCACACT
CCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCAGCATATGCCACGACGAGCTAGCCCCCACCAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCTTTTTTGTATCGCAATACGCCTATCTCATG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ATACCGTCCAACGGGATGCGATACAACGGCATGTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGATGGACACAGAACCAAGTATGACCGATGTTGCG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGGGCGGGACGACAATCATGTGCAGACGCGCGCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCGACAACGACGGGAACATGCACATCGCACTCGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGATTCGTCGGCATATCCGGCTGCTGGATTACCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCAAGTTTGGATATTGTTGCATGGTGCAACTGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ACCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCGGTTGTCCTTTGACTTGACTACGTGGTCGATGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CACTCATACCCTGTGACTTGGTACTGGTGACCGTA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGATACGATTTACGAGGATGTCGATGAACTGGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACCGCAAGAGAAAGAAACGTGGATTCGACAACAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCGCACGGCAACGGCAGCATGGACCGTTGGAACGC
TCCTCAATGAAGTGCATACATTTTGACGTATGCAAG	GACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GAAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACTCCTGTTCACGCCACCCCATACGCCCTGTAACGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCATGCACTAATAAGGTGTATGGCCCTACTATTAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TCCGTAACCAGAACACCCGGGTCGGTGCCCAATGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTCTCGCTGATGGGCATCTGGACCACCGCCGACGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ATCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATTCTGCCATGCCCTACGCCGTTACCTTCCAGCAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AAGACTGCTGCAAGACGAGATGGACCGAATGGAGGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CATCTCAGTCCAATTGCAACCATACGGTCGGGACTCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TCACACTGCCTGTCACGTGCCGGAAACTCGAACTGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AAGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GAATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATTACTTTATCCGCAGACATCACATATCCAGTCAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTAGTGAGCTGTTTGGCGAAACAGAAACAATGTGAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTGGACGGCGAGATCGTCAAGCTCACGACGAACAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGCAATGGGCGTTGACGTATTCGACACGCTGGACGAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATGTTGGTGCGCCCGGTTCCAGTGCGCATATATAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCTCAGGCATATGGCGACACGTGGCAGGAAATCGCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGGATCTGCCTGTAGGTCTGCGGAGCAGACGACGAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCACCGTGCCACGGCCACCGGCCTTGAACGGTATG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCATGAGCCGCGCAATCACGCCATTGGAGCCGACCAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG

>NZ_CP046514|6|5|1663182-1667617|CRISPRCasFinder
CCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCAGCATATGCCACGACGAGCTAGCCCCCACCAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCTTTTTTGTATCGCAATACGCCTATCTCATG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ATACCGTCCAACGGGATGCGATACAACGGCATGTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGATGGACACAGAACCAAGTATGACCGATGTTGCG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGGGCGGGACGACAATCATGTGCAGACGCGCGCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCGACAACGACGGGAACATGCACATCGCACTCGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGATTCGTCGGCATATCCGGCTGCTGGATTACCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCAAGTTTGGATATTGTTGCATGGTGCAACTGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ACCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCGGTTGTCCTTTGACTTGACTACGTGGTCGATGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CACTCATACCCTGTGACTTGGTACTGGTGACCGTA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCGATACGATTTACGAGGATGTCGATGAACTGGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACCGCAAGAGAAAGAAACGTGGATTCGACAACAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCGCACGGCAACGGCAGCATGGACCGTTGGAACGC
TCCTCAATGAAGTGCATACATTTTGACGTATGCAAG	GACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GAAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACTCCTGTTCACGCCACCCCATACGCCCTGTAACGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCATGCACTAATAAGGTGTATGGCCCTACTATTAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TCCGTAACCAGAACACCCGGGTCGGTGCCCAATGTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTCTCGCTGATGGGCATCTGGACCACCGCCGACGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	ATCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATTCTGCCATGCCCTACGCCGTTACCTTCCAGCAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AAGACTGCTGCAAGACGAGATGGACCGAATGGAGGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CATCTCAGTCCAATTGCAACCATACGGTCGGGACTCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TCACACTGCCTGTCACGTGCCGGAAACTCGAACTGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GTCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AAGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GAATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATTACTTTATCCGCAGACATCACATATCCAGTCAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TTAGTGAGCTGTTTGGCGAAACAGAAACAATGTGAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTGGACGGCGAGATCGTCAAGCTCACGACGAACAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	TGCAATGGGCGTTGACGTATTCGACACGCTGGACGAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	AACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GATGTTGGTGCGCCCGGTTCCAGTGCGCATATATAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CTCTCAGGCATATGGCGACACGTGGCAGGAAATCGCC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CGGATCTGCCTGTAGGTCTGCGGAGCAGACGACGAT
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCA
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GGTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	GCCACCGTGCCACGGCCACCGGCCTTGAACGGTATG
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG	CCATGAGCCGCGCAATCACGCCATTGGAGCCGACCAC
TCCTCAATGAAGTGCATACGTTTTGACGTATGCAAG

>NZ_CP046514|6|2|1663183-1667617|PILER-CR
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	TCAGCATATGCCACGACGAGCTAGCCCCCACCAAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TGGCTTTTTTGTATCGCAATACGCCTATCTCATGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	TACCGTCCAACGGGATGCGATACAACGGCATGTCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	ACCCAGCGCGCCGTATATCTGAGTCCAGATATTGAGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	GATGGACACAGAACCAAGTATGACCGATGTTGCGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	CCGGGCGGGACGACAATCATGTGCAGACGCGCGCCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	TCGACAACGACGGGAACATGCACATCGCACTCGCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	CCGATTCGTCGGCATATCCGGCTGCTGGATTACCGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	TCAAGTTTGGATATTGTTGCATGGTGCAACTGTTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	CCGTTCGCTAGCGGTCCTCGCGTCCTGGTCGCTTAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CGGTTGTCCTTTGACTTGACTACGTGGTCGATGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	ACTCATACCCTGTGACTTGGTACTGGTGACCGTAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	CCGATACGATTTACGAGGATGTCGATGAACTGGTTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	GCGTTGCCCAAGTATCGCCTTGACAATTCCGGTAACT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	ACCGCAAGAGAAAGAAACGTGGATTCGACAACATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GCCGCACGGCAACGGCAGCATGGACCGTTGGAACGCT
CCTCAATGAAGTGCATACATTTTGACGTATGCAAGG	ACCGTAGAAGCCTCGTAACAGTGCACGCTGCTGGCGGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	AAGAAGGATACGCATTGTTCTCGGCTGATGTGGCTTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	ACTCCTGTTCACGCCACCCCATACGCCCTGTAACGGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	TCATGCACTAATAAGGTGTATGGCCCTACTATTATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	CCGTAACCAGAACACCCGGGTCGGTGCCCAATGTTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CGGCCTCGGAATGAGTCGCGGGATAGTCGCGTTCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TCTCGCTGATGGGCATCTGGACCACCGCCGACGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	ACGTCGAAGTGCCCAATTCCCAGACCAAGGTCGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	ATGCCGAGTTGGGCCGTGTATGACGGTTCTCCCGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CCGAACGCGCGCATTATGGTTGTCCCTATGTTGTGGCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GTCCGCAGCGTCATCGGCGGAATGCGACTCGACAGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GCCATTCATGGGCCACGAACACTCTGGCCGCCGGAGCGGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TCTCCTGAGTATGGCGGGGCACGTCCGTGGGGCTTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GCTCGCCGTCTCATTGAAGGACACCAGTACGTCCGGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	TCCCGCCACTGAGCAGGGGGCAGCTTTTTGTGCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	GTGTTCAGTTCGGCGGTCTCTGCGTTGCTGTAGTCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	CTGCGCGAAAGACAGTGTTGGCGCAAGGGCACCCAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	ATTCTGCCATGCCCTACGCCGTTACCTTCCAGCATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TGGCGGGCGCGACGGAGCGAACCAGAAGATCATCAACT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	AGACTGCTGCAAGACGAGATGGACCGAATGGAGGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	ATCTCAGTCCAATTGCAACCATACGGTCGGGACTCCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	CACACTGCCTGTCACGTGCCGGAAACTCGAACTGCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	TCCCGTCAGGAGGAGGTCGACAAGTTGAAGGCCCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	AGGGTGATTTGGCGGCCCGCGTGGTCGTCCACTGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	AATCCTCGCCCGGACCAGTCGAGCGATCTGACGAAGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TGGCGACGGTGGCCCTGAGGTCCTCGCGGCTCGTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	GGGATTGTTCTTGGGTTTTGTTCTCTTGGGTTTTGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	ATTACTTTATCCGCAGACATCACATATCCAGTCAAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	TAGTGAGCTGTTTGGCGAAACAGAAACAATGTGATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	ACCCGTTGAGTGTTTTCCAGCGTGCATCTCAGGCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	TGGACGGCGAGATCGTCAAGCTCACGACGAACATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGT	GCAATGGGCGTTGACGTATTCGACACGCTGGACGAAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	GGGGTGCGGGTGTCGCCGCCCTCCACTTGTTCTTCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGA	ACGTGCGTTTATCGAAAACACGTTGAAGCCGCTGTT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CCCGCGCCCAGTTTTTTCTCCCCCCAACCCAAGAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	ATGTTGGTGCGCCCGGTTCCAGTGCGCATATATATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	TCTCAGGCATATGGCGACACGTGGCAGGAAATCGCCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GCCCGCTCGGCTCGAAGGATATGCTCACGATCTTGGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	GGATCTGCCTGTAGGTCTGCGGAGCAGACGACGATT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CCTTTTTGTCCCCGGTTCGCTCCCTTTTTGTCCCCAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	GTCGCGTAGGGGAGCCACGCGGAGCCGTTCCAGAAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	ACCATGGAAGGCGCGCTGGGCAATCTTGAGGCCGCAT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	GTCGAACAGGCCGCGCCGCTCGTCGATGTTCCCATTCT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGG	CCACCGTGCCACGGCCACCGGCCTTGAACGGTATGT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAGC	CATGAGCCGCGCAATCACGCCATTGGAGCCGACCACT
CCTCAATGAAGTGCATACGTTTTGACGTATGCAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_156625284.1|1677991_1681303_-|mupirocin-resistant-isoleucine--tRNA-ligase	unknown	unknown	gnl|CDD|235681
NZ_CP046514.1|WP_041473692.1|1654914_1657227_+|primosomal-protein-N'	unknown	unknown	gnl|CDD|237844
NZ_CP046514.1|WP_156625281.1|1661716_1662937_+|methionine-adenosyltransferase	unknown	unknown	gnl|CDD|235374
NZ_CP046514.1|WP_074709567.1|1654122_1654875_+|phosphoserine-phosphatase-SerB	unknown	unknown	gnl|CDD|319803
NZ_CP046514.1|WP_007053158.1|1661154_1661439_+|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl|CDD|234744
NZ_CP046514.1|WP_117793359.1|1681894_1683106_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|224090
NZ_CP046514.1|WP_101011282.1|1683111_1683774_+|hypothetical-protein	unknown	unknown	gnl|CDD|214988
NZ_CP046514.1|WP_131275511.1|1671191_1674401_-|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	gnl|CDD|274235
NZ_CP046514.1|WP_007053954.1|1651777_1653343_-|proteasome-ATPase	unknown	unknown	gnl|CDD|200312
NZ_CP046514.1|WP_156625277.1|1650088_1651756_-|proteasome-accessory-factor-PafA2	unknown	unknown	gnl|CDD|274726
NZ_CP046514.1|WP_032746370.1|1670054_1671188_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl|CDD|187733
NZ_CP046514.1|WP_065443579.1|1653403_1654102_-|DedA-family-protein	unknown	unknown	gnl|CDD|223659
NZ_CP046514.1|WP_115778716.1|1667892_1668000_+|IS3-family-transposase	unknown	unknown	unknown
NZ_CP046514.1|WP_080714433.1|1674397_1676140_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl|CDD|274005
NZ_CP046514.1|WP_080714434.1|1668126_1668423_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP046514.1|WP_156625279.1|1657285_1657990_+|HAD-IA-family-hydrolase	unknown	unknown	gnl|CDD|319790
NZ_CP046514.1|WP_060662296.1|1659090_1660953_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|237104
NZ_CP046514.1|WP_007053160.1|1658013_1659000_+|methionyl-tRNA-formyltransferase	unknown	unknown	gnl|CDD|234567
NZ_CP046514.1|WP_032746426.1|1676155_1677361_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	gnl|CDD|378223
NZ_CP046514.1|WP_032746372.1|1668472_1670065_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP046514.1|WP_080714433.1|1674397_1676140_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	1.7e-63	210.0	0.8
NZ_CP046514.1|WP_032746426.1|1676155_1677361_-|type-I-U-CRISPR-associated-protein-Cas7	cas7	cd09738_cas7_CAS-I-U	4.3e-18	60.6	0.0
NZ_CP046514.1|WP_080714434.1|1668126_1668423_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	5.7e-20	66.1	0.1
NZ_CP046514.1|WP_131275511.1|1671191_1674401_-|hypothetical-protein	cas3	cd09696_cas3_CAS-I-U	1.2e-67	223.0	3.4
NZ_CP046514.1|WP_032746370.1|1670054_1671188_-|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	8.4e-101	332.2	0.1
NZ_CP046514.1|WP_032746372.1|1668472_1670065_-|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1.5e-85	281.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_156625284.1|1677991_1681303_-|mupirocin-resistant-isoleucine--tRNA-ligase	gnl|CDD|235681	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP046514.1|WP_041473692.1|1654914_1657227_+|primosomal-protein-N'	gnl|CDD|237844	PRK14873, PRK14873, primosomal protein N'.	0
NZ_CP046514.1|WP_156625281.1|1661716_1662937_+|methionine-adenosyltransferase	gnl|CDD|235374	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated.	0
NZ_CP046514.1|WP_074709567.1|1654122_1654875_+|phosphoserine-phosphatase-SerB	gnl|CDD|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.82523e-103
NZ_CP046514.1|WP_007053158.1|1661154_1661439_+|DNA-directed-RNA-polymerase-subunit-omega	gnl|CDD|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	3.15482e-17
NZ_CP046514.1|WP_117793359.1|1681894_1683106_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	5.17326e-110
NZ_CP046514.1|WP_101011282.1|1683111_1683774_+|hypothetical-protein	gnl|CDD|214988	smart01038, Bgal_small_N, Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.	4.11479e-73
NZ_CP046514.1|WP_131275511.1|1671191_1674401_-|hypothetical-protein	gnl|CDD|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	3.83128e-44
NZ_CP046514.1|WP_007053954.1|1651777_1653343_-|proteasome-ATPase	gnl|CDD|200312	TIGR03689, pup_AAA, proteasome ATPase. In the Actinobacteria, as shown for Mycobacterium tuberculosis, some proteins are modified by ligation between an epsilon-amino group of a lysine side chain and the C-terminal carboxylate of the ubiquitin-like protein Pup. This modification leads to protein degradation by the archaeal-like proteasome found in the Actinobacteria. Members of this protein family belong to the AAA family of ATPases and tend to be clustered with the genes for Pup, the Pup ligase PafA, and structural components of the proteasome. This protein forms hexameric rings with ATPase activity. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP046514.1|WP_156625277.1|1650088_1651756_-|proteasome-accessory-factor-PafA2	gnl|CDD|274726	TIGR03688, pupylate_PafA2, proteasome accessory factor PafA2. This protein family is paralogous to (and distinct from) the PafA (proteasome accessory factor) first described in Mycobacterium tuberculosis (see TIGR03686). Members of both this family and TIGR03686 itself tend to cluster with each other, with the ubiquitin analog Pup (TIGR03687) associated with targeting to the proteasome, and with proteasome subunits themselves. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP046514.1|WP_032746370.1|1670054_1671188_-|hypothetical-protein	gnl|CDD|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.06456e-98
NZ_CP046514.1|WP_065443579.1|1653403_1654102_-|DedA-family-protein	gnl|CDD|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	2.03169e-42
NZ_CP046514.1|WP_080714433.1|1674397_1676140_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl|CDD|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.90223e-46
NZ_CP046514.1|WP_080714434.1|1668126_1668423_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	7.60503e-16
NZ_CP046514.1|WP_156625279.1|1657285_1657990_+|HAD-IA-family-hydrolase	gnl|CDD|319790	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive. This family includes the N-terminal phosphatase domain of human soluble epoxide hydrolase (sEH). sEH is a bifunctional enzyme with two distinct enzyme activities, the C-terminal domain has epoxide hydrolysis activity and the N-terminal domain (Ntermphos), which belongs to this family, has lipid phosphatase activity. The latter prefers mono-phosphate esters, and lysophosphatidic acids (LPAs) are the best natural substrates found to date. In addition this family includes Gallus gallus sEH and Xenopus sEH which appears to lack phosphatase activity, and Escherichia coli YihX/HAD4 which selectively hydrolyzes alpha-Glucose-1-P, phosphatase, has significant phosphatase activity against pyridoxal phosphate, and has low beta phosphoglucomutase activity. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	9.78964e-46
NZ_CP046514.1|WP_060662296.1|1659090_1660953_-|dihydroxy-acid-dehydratase	gnl|CDD|237104	PRK12448, PRK12448, dihydroxy-acid dehydratase; Provisional.	0
NZ_CP046514.1|WP_007053160.1|1658013_1659000_+|methionyl-tRNA-formyltransferase	gnl|CDD|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	2.78526e-128
NZ_CP046514.1|WP_032746426.1|1676155_1677361_-|type-I-U-CRISPR-associated-protein-Cas7	gnl|CDD|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	7.6659e-28
NZ_CP046514.1|WP_032746372.1|1668472_1670065_-|CRISPR-associated-endonuclease-Cas4/Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.17784e-91

Protein sequences

>NZ_CP046514.1|WP_156625281.1|1661716_1662937_+|methionine-adenosyltransferase
MTEEHRLISAESVTEGHPDKVCDQISDAILDDLLAQDSSSHVAVETSAATGVFLIFGEVTSKGYCDVQSKVRETLRNIGYTSSEVGLDADSCGVVVAITEQSAEINQGVARLTGDQETAASREERYEAQGAGDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDNDKPVHLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDEVLGSKVPHDNYRQLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATRWVAKNIVAAGLAHKVEIQIAYAIGVADPVSVNVETFGTEQGVTRGQIAAAVRKVFDLRPAAIIDELDLKRPIYLKTAAYGHFGRTDVEFPWEKTDKVEELKAAIAAE
>NZ_CP046514.1|WP_007053158.1|1661154_1661439_+|DNA-directed-RNA-polymerase-subunit-omega
MAFGTDPTPDGLANPPIDDLMKHADSKYALAIFAAKRARQINSYFTQLNEGLLQNIGPLVEYQNNEKPLSIAFREIDEGLLEETLGEDDANEGN
>NZ_CP046514.1|WP_060662296.1|1659090_1660953_-|dihydroxy-acid-dehydratase
MTEMRSAKIMSGRVFAGARALYRAAGVNGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRIVSEAIKEAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICIPNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLADGTVKSTDLIDVMYATADDSVSDEELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFERAAKQVVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDIERISHTVPCICKASPSGKWEISDVHRAGGITGILGELDRAGKLHTNVHSIDYPTLEAKLADWDIMRPTCTEEAQQMYKAAPGHIISPEPWTHTTLFDSLDRDRANGAIHDINHPEIHEGGLAVLRGNLAPDGCVVKTAGVPPEIWKFRGPALVVDSQEQAIEVILNDTLKPGMALVIRYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPVALIKNGDIIDIDIEARSVNVELTDEQLDERRRELEAGDGYVAHRNRHVSQALKAYAAFARSADKGATRDPELINKLSGLN
>NZ_CP046514.1|WP_007053160.1|1658013_1659000_+|methionyl-tRNA-formyltransferase
MLKLVFAGTPDVAVPSLKAFAADPRFDVVGVITRPDAPTGRGRKLTPSPVKATALELGLPVIDLKPRSPEFMEALNNLHADIAAVIAYGNILPKNVLDAVPMGWYNLHFSNLPKWRGAAPAQRAIWAGDPTTGADVFKVGEGLDDGPIVASLTIELTGRETSGELLDRLAEEGAPMYVDALAAVGEGTATFTAQPAEGLEYAHKITVEDARISWTDEAEAIDRQVRACTPHPGAWTELFAEGPIADNDEPAAKPLTLHILAAQPADQSNPNTPAELQPGELKVGKKNVWVGTGSTPLELTQVKAQGKKAMRAADWARGARLSPAACVR
>NZ_CP046514.1|WP_156625279.1|1657285_1657990_+|HAD-IA-family-hydrolase
MKGWPGEPDMDYDVLVADGEAAANAGKPITDVIFDFGNVLIYWDPAAVLIPRYSQKTIDEFLDNDISGFYDVNDLMDGGTSTDEAIAIMRRDRGDKWADILDYYIKNFRDSLTGIVPGARVLVNDLKAAGIGVWGLSNWESSLFHVAEEQCDILQQLDGKLVSGFVKLRKPHKEIYEAALNQFGIKADGALFIDDKAMNIVGSNAAGIRGVRFQDPVKLRELFIANGVNIPAVQ
>NZ_CP046514.1|WP_041473692.1|1654914_1657227_+|primosomal-protein-N'
MTTSGAEQLTLAGLAPRKRRKRAPAEHTPAEQHPIAQVVLDVQALHLGQTFDYFIDEKDSEAAQPGVLVRVRFGGQRVSGVIWARTDTSDTPRSSIRYIERVLSPDVLVPASMREDIGLVAKAYGGTRANILRFAVPPRVAKVETEQRLAASFRRPVGGSLPDNTQGGFAGRGTNPDGTKLAGSTFAVASTVSEGAAQGYRRLTANYADVNVLHDALTGQRFQSFVFDSLPGAQEWQRNMAWMVATALSAGKAAVVELPTMREVEDLMHMLRNYGLKPFAPAPTGGWMGDVAVLNAETMPAADRYRTYLAVALGQVKVVIGTRAVMYAPVEGPALFAILEDAAYQNMDGMMPYPQARGVMRLRAKSHGGVFVAMANARTPQSQWENTGPGTVETPVSGYSTAIHPLASPLKDATPWVRWLNRDELARLADPSIGARVPHTAVRVLSKALESGPVLLSIPQDNVSETLSCAKCHRQVRCAKCSGPLQLPADRRDSTPRCRWCGAAAINWKCPGCGHERMRVVRVGAAGTAAELAGLFRGVPVVLSSKTQGLVRDVACQPMIVIATPGFEPRVRPVSAEQGSAGHEYRAVAVLDAWTSLYALGVDARLDTLTAWMRAMSLCAPRSRGGQALILGETDPAIAQSLMLWDSRILAAKDLEERVETGMPPAVAAACVWGRRDAVMTLMQRIGALGGDWTACGELPGMLGPVPIAQPDTVDARELEATADRVKAVIRVPQSRRAELAARLHRETSRHVASREPGELRFRVDPKDLI
>NZ_CP046514.1|WP_074709567.1|1654122_1654875_+|phosphoserine-phosphatase-SerB
MSQGFPRIRSMTQEDVHFVDKSAESEVGSPADSAVSVPTLSKPGLLVMDVDSTLIDEEVIDELGVVAGCGEEIAGVTARAMRGELEFCDALRARVALLEGLPISVFDTVHDKLHFTKGALELIDTLHEHGWKIGVVSGGFHEVVDMLAAEGHIDYWIANRLEVADGCLTGKVLGEIVSKTVKLHALQTWADRLGIPMSQTVAVGDGANDIPMIQAAGLGLAFCAKPKTQLAADKAINDRDLTHVLDYLRR
>NZ_CP046514.1|WP_065443579.1|1653403_1654102_-|DedA-family-protein
MAAATILATDPTPICTTTEPGLIGTITDWLIMLMETIGGIGVALAIALESIFPPIPSEVILPLSGFTAARGTLSLPGAIIWATIGSVLGAWTLYGISRWVGLHRINLAADKIPGVSRKDVSKANDWFTKYGTWSVLIGRVIPVVRSLISIPAGFNRMNFLHFTGWTLLGSAVWNTILVSAGYLLGDQWCSIQGALGVFEDVVIAAVIVIIVWFVVRKVRTVIRNRKSADGNE
>NZ_CP046514.1|WP_007053954.1|1651777_1653343_-|proteasome-ATPase
MSDTEDLAALNDRLMAKNHALAEALSRAGKELTKAKSQLAQLAQPPLTFATMVKVDSTRTDEDGIQHASAEVISGTRRMVVPVASNVNAARLTAGATVMLNEKLVLVEQRDADTVGQIRSVKQVLDDGRLIVTDASGNPVLIRRSGALAYAGINQGDRIIVDPSVRLAIEALPAEGDKDLVLEETPDVTFADIGGLDSEIGRIRDAVQLPFQHRALFERYDLKPPKGVLLYGPPGNGKTMIAKAVANALCEGGYDTNGDGSISPAETHVKGVFLSVKGPELLNKYVGESERLIRLIFQRARERAADGNPVVVFIDEMDSLLRTRGSGVSSDVETTIVPQFLSELDGVESLDNVMVIGASNRVDMIDPAVLRPGRLDVKIRVGRPKANQAIAIVDHYLTDDLPLEDGVDAHALSAVLVHDIYGTSERRHLCDVQEENGQWHALFLADVVSGAMLKNIVDRAKTRAVKESIETGLDVALTVPLLAAAVEDEYRETRDSMADVDPEQWSRINGMDPIRRIRTAE
>NZ_CP046514.1|WP_156625277.1|1650088_1651756_-|proteasome-accessory-factor-PafA2
MTVKRVMGTETEYAVSLNTPDRYNPVQLSFDVVNGAADSHSKSIRWDYRQEDPVNDARGTRLERAAARPDMLTDAPQLNITNVIAPNGGRVYVDHAHPEYSAPETTDPFEAVRYDHAGDLIMQAATEHARKQTGTPIALHRNNVDGKGSCWGTHENYMMARAVPFDLVTRLMTLHFVTRQIYAGSGRVGIGENSEIPGYQLSQRADYIHAKVGLQTTFERPIINTRDESHSTDAYRRLHVIVGDANRMEVPQALKLGTTSMLLWLLEHADEAGFDLNAFLDELELSDPVEAIHTVSRDLTLGAILPLANGGETNAWLIQLKLRQAVYQVAALVEGADTAGEPAWPDKSTTSIMAMWQQALIDCASIRHAADDDERLAMTGEASRIEWLLKWQLLEKLRRKITTTSAPGVANGWNDPRLKVIDLKWAALDPADSIFTKLEPRTERVVSAADIARATTEPPEDTRAWLRAKLVAQFGDEVAAASWSRLTVRDPRAADEGEAVEFYGNAGHMAATDHHLFSLDISDPLAFTKAHCETELNSAEHAIDLLKSLAINAER
>NZ_CP046514.1|WP_115778716.1|1667892_1668000_+|IS3-family-transposase
MKQYTYLTHYNETRIKKSLDWISPVQYRKHLGLAA
>NZ_CP046514.1|WP_080714434.1|1668126_1668423_-|CRISPR-associated-endonuclease-Cas2
MSDEQRSYLIAYDVKDDRRRSHVAKLLQSYGERMQYSVFLLRIRPAKLIAVQTVLETEIDLLSDSVVVCDLGPSNRVNQALNFIGVRGYKDIVIPTII
>NZ_CP046514.1|WP_032746372.1|1668472_1670065_-|CRISPR-associated-endonuclease-Cas4/Cas1
MNDDPIPISLVANYMFCPRRAWLEAVGERVDSAQMSQGTYDHRKVDCIAGADDSDDYRAVNVRHEVWGVAGRLDAAKMTDEGVIIREYKATPVKRAMIVTDAMRTQLALQAACLEDMGFRVAGAEIFFTTHHRNVEVELGSEDYERAHTAVKETRALINSDSAPEPLEDDARCMRCSHVGVCLPEERKLTSVRHRVMVTSPDNQVTHLATPGAKAFSRAGRMVVLKNGEEIASIPLDTIQGLQVHGNTDLSSGLMRELMWRDIPVLWCSGTGRLYGWTMPSYGPNGSARVQQHVASHEGRLGLAREFIVAKVHNQSVLLRRSDRSNPVLEQLLLIEKTVRNTNRWQDVLGLEGKAAALYFSQFGMLIKQDKREDWPWTARMKRPAPDALNSLLDYTYSLLLSDCIRALISCGLDPHAGFLHSSKRNKPALALDLMEEFRAPVADSVVQTVVNNGEVSPDGFIYSLGSSVRMSDMARKSLIGAYERRMQTELTHPIFGYKASWRRIVEIQARMILGYLDGTQQTYRGIRIR
>NZ_CP046514.1|WP_032746370.1|1670054_1671188_-|hypothetical-protein
MELIINGRYDEAFSHLLLFGLASILEDADDSRICTIRWIDRTHAGIDVSDNLSWEDCATVIRDHAHRWSMSSWLNASDVYSVPVKSGKSSKNAVSAARATLSPRLGTPSPDDRWRLLECNRARAIDDLQTDLDRRYIGALGEPSYWSGDMAAQGYTPDRGASRWEMVTRNRGQEFISGRLLPLAKAVAERNVQSIVEGLRGTTITDEAGKNKQDSRTPTGLRHPSLTDNAQAWCALFGVSAFPVMKGVSARRGATASLFQLPRYGSYAILPVWLQPWTLQKYRSVVRSQALLIVGIEAVLGNDDKDDAVREKDDGMLKRIGANNAAISLSRQWLNGKGVEYAMLFPQYVSSNSSAPERWLKKGELVLLDSEKTDYER
>NZ_CP046514.1|WP_131275511.1|1671191_1674401_-|hypothetical-protein
MNDSNKNGINEALELIDQAFVQFVREIYGGRTPYAWQRRLVHELASTNRWPERLAAPTGAGKTMVIDVHVFLNALAGLATSDSILADSSLGKAAAVCGLRHLPRRLVITVNRRALVDDQYDSACALTDTINAHGNPPSDSASSLLRDVYQGLLARAGESDMDTVVPCRVVRLRGGEPVDFTMRDWRYHPTECQVICATPDMFASRLLFRGYGTSTLARSIEAGLFGYDTVLIADEAHLNRQMVYTAQSVNRLEHLSSDGLAQSVPPLQVVSTTATQADNAGSDEELCIGVCEKDLAGDPELTRRLTSPKPVKVVSIPASREKDFAKLVAEACVDAFTDKNDDAVVGCIVNSVAMASDVMKQMRVIMRDRGFEKGAFERKVRGLVGPMRRYDKRQLLDGTMRSSDVNDSSLKDGLLLRAIKGDTEAVQMSELRCVVATQTLEVGIDADFSMLITELPSSSALVQRAGRVNRRGLRDEGPIVVFRHEDSSKTKSIYSSEELEAAWQWLQELPAESGLSAWGSVLHPPIPPRLPRAALQRLEQWDVENLSHTDEELGSSLSWLYQAASDVALWLRDDLLSGDELSNGLVVRQLPKNDSDAIGLLTKAQPVADEVFPIQGRGQIDEIGKRWVNSQDQSNSIAPFRVFIVRADEQQDMAVIQWRNEESLNDSIHPGDTLVVDDTATLFDRDLHIIAPKTAQSTNDVYNLCQSRGVILSQQVLDLQEQNRVLTSAIEDLRENLQRDSESSAGANEAQHKAKMDNTDDAEPMMLDLIKDDHARNVLVRIISETNNRFGCTPQDQQTFWQQYNADSVHDVVPVEYAIFPAVTLDYGDNPWLFVQLTTDAIADGEALQEIRSPRRHGKSLVYLNTSDGHQQSVAQRAERFMKVLDLPSSLQQDIAVACRHHDDGKKDLRFQELLHYRLSRPEYYQQSKYLAKSRYRSIAREAVVRRELNLQGWRHEQRSAAECWAERDALHAVDVELVTRLVGTSHGHGRSCFRDNAERLVPPAEIAAEQAMTAVDIERIHAAAEELFNGGMWECIVNCTNRRYGYWGVSYLEAIVRSADVTISQEGR
>NZ_CP046514.1|WP_080714433.1|1674397_1676140_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPFTITARFLLHTYQGADTTGKPERYPSPERLYKALVSTAYGAFGFNSKYAKQESRVSDQQLEAVFRWLETNPPDAIRAPRMSRRNGSDAIVYRDRGSRSKKIAADKKNVSAVCSTAYPDTNEGTLIWQWKQEPDADIADLLSRLCWEVPYLGEACSPVNLTTTNVPDDEFPVDPDNSLYKSDDDLSAARMAATVEFDVPDIGHLQELQRGYEQVYPRKVSASNGSEEEKTVLSNTLTDCVRSIGYQRKQGWIASSEMRPWQHGFFIPAAVAATKSSATVDDEHDVAWNPDESTFVAWSVALHRLLVRQWGYGASPLLTGRYEKGSTVPRPANNVAIQVLTAGMPVRDDELRECLPGFLVMVPHDMPVDEIDHLADVCDTLRKQQLFYARQSETLCLGEAMEVDLDTFWQPVKSGYRRLWTPYPLCIKETRKFRSRTDSNRLWNVQDSMALAIAYVWREYFTHRQDDADTDEAVNSPSVSIRESRYWSMADCVNNPESGVHIYDAHDETRTPMTDYVHKTQPGNLLMGMTALLSFDKQQWPIEQSAIAIGQSRHLGGGFLVPVDVYTQLIDKNGKPVWLR
>NZ_CP046514.1|WP_032746426.1|1676155_1677361_-|type-I-U-CRISPR-associated-protein-Cas7
MVRALTLEDLNKAAKLGGPSTLSEKTLLEPAAGPEGIIAPAKYTGSNGATYVFEDRYIGGESKRTVLVDSRTSQSNRLEDYVTKAIKDGHPVLSRMPRIRVTYQVPDETGETFERSYLETQLPHRAFDGHIRIGSINGKSTSELTEYVQARNSTAENMMPLFTLSPITVAFGGWDSTRRKNQLRIASPFNGEIIGVLANQDQDRPVFRAGARVDPVEASIKFDKDDAKAIGRIIQPEVSDNTFKTFEKEGKGSKIGLGAIPPSTKNDAYDGIAVSNIIRTHVLSFSTLRSLRFGKGPEGDAAIRVLIAALILDAMAGSNSELVLRANCVLRESAKPTMILDKRFGESDELDMLDLSHADELLTEAYDQAVAKAGVDWHGQVLEVTGNPLVMKAGSADESED
>NZ_CP046514.1|WP_156625284.1|1677991_1681303_-|mupirocin-resistant-isoleucine--tRNA-ligase
MSENVYPKASEGGETAHVAPNPSFPDMEETVLDYWDKDDTFQQSVERNPSGDHSQNEFVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQKELGIDSVDQIEKMGIDKFNDACRASVLKYTNEWQNYVHRQARWVDFEHGYKTLNIPYMESVMWAFKQLYDKGLAYQGYRVLPYCPKDRTPLSAHELRMDADVYQDRQDTTVSVAVKMRDEDDAYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGKFAGKKFYLGKDLLPHYEKELGENYEVVRELKGNELAGRRYYPVFPYFAGDEAESEGHVPGPNGYTIFTADYVDTVEGTGLVHQAPYGEDDMNTLNAKGIKSTDVLDDGCRFTAQCPDYEGDFVFDANLPILRNLRAGDGPLAEIPEERRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKPRLLELNQQINWIPGNVKDGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLEELKADFGDYPRDKDGNINMHRPWIDNLVRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKEKFEQHFPADYIVEYIGQTRGWFYLLHVMATALFDRPAFKNVICHGIVLGSDGQKMSKHLRNYPDVNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLYANAANGGAGFDARQLRADEVAGLPEMDRYLLARTRRLVLAAEKSLNEFAISDACDAVSDFIDVLTNWYIRNTRDRFWNEDASAFNTLYTVLEAFMRVLAPLAPMEAESVWRGLTGGESVHLADWPFVVDEKTGADTELGRVLVDDPALVSAMEKVREVVSGTLSLRKAAKIRVRQPLSKLTVVVENVDAVKAYDELLKSELNIKNIGFSTMEDAAAHGLKIVHELRVNARVAGPRLGKQVQFAIKASKSGDWHVDAASGAPVVSTPSGDLALVEGEYELINRVEEENATEAAASVSAALPTGGFVILDTALDADLLAEGYARDAIRAVQDARKAADLDIADRISLVLTVPAADVAKVEQFKDLIARETLTTSFEVKEGAELAVEVAKA
>NZ_CP046514.1|WP_117793359.1|1681894_1683106_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MTYDFTSIMDRHGKDAIAVDGLGTDLGFAPDPPRDGFDVIPMWVADMNFPTVPTVPQAIIERAQHPVYGYFSPTDDYYNSIIDWQSTRNGVTGLTSEAIGYENGVLGGVISTLTAFAAPGDSVLLHSPTYIGFTMCIENNGYRIVHSPLKLDEHGVWHMDYEDMDKKLKEHHIHVAVFCSPHNPCGRVWERWEIEKAMEVYKANDCVVISDEIWSDLTLGNHQHIPTQSVSEDARNRTAAFYAPSKTFNLAGLVGSYHIIYNPMLRDRIVAKGSKSHYNEMNVLSMHALIGAYKPEGHEWLDELKEVLTGNVDYAYDYITKHFQGVSLAKPEGTYMLLLDCEQWCKAHGLTLAELEKRGWDVGVDWQDGSMFQAPYSIRVNLALPLSRIKEAMRRLDQYVFNA
>NZ_CP046514.1|WP_101011282.1|1683111_1683774_+|hypothetical-protein
MHPRLRCPGKTNAANEVCARWRHSSYVGRTGRNPSCQVAVRYEVDAASGRVHLTARYAGATDAPTLPAFGLEWTLPKQYENLRFYGLGPEETYHDRLHGGKLGIFERTAAEDNAPYLVPQETGNHEDLRWAEVLDAQGHGMRISQAGSEHFAASLLPYSSLMLEEATHQNELPPVRHTFLRLLAAQMGVGGDDSWGAPVHEQYQLPADRAYTLDVNLELF

Crispr_ID: NZ_CP046514_7

• CRISPR_ID: NZ_CP046514_7
• CRISPR_location: 1871033-1871118
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_7

Consensus_repeat	Method
GGCCCTGAGCGTGCGGGCGCGGA	CRISPRCasFinder

spacers of NZ_CP046514_7

>7.1|1871056|40|NZ_CP046514|CRISPRCasFinder
ATCGCATTTGAAGCGGCATTGCCGCCATTGGCACCGGCGC

CRISPR arrays and Neighbor proteins around NZ_CP046514_7

CRISPR arrays

The CRISPR arrays of NZ_CP046514_7

>merge|NZ_CP046514|7|1871033-1871118|CRISPRCasFinder
GGCCCTGAGCGTGCGGGCGCGGAATCGCATTTGAAGCGGCATTGCCGCCATTGGCACCGGCGCCGCCCTGAGCGTGCGGGCGCGGA

>NZ_CP046514|7|6|1871033-1871118|CRISPRCasFinder
GGCCCTGAGCGTGCGGGCGCGGA	ATCGCATTTGAAGCGGCATTGCCGCCATTGGCACCGGCGC
CGCCCTGAGCGTGCGGGCGCGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_007053049.1|1882378_1882921_-|50S-ribosomal-protein-L17	unknown	unknown	gnl|CDD|235522
NZ_CP046514.1|WP_007055304.1|1877922_1878723_-|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224
NZ_CP046514.1|WP_007053050.1|1881385_1882297_+|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl|CDD|211337
NZ_CP046514.1|WP_007053048.1|1883020_1884016_-|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl|CDD|235359
NZ_CP046514.1|WP_008783615.1|1875544_1877113_-|alpha-N-arabinofuranosidase	unknown	unknown	gnl|CDD|226064
NZ_CP046514.1|WP_004268639.1|1863121_1863211_-|AURKAIP1/COX24-domain-containing-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_117773081.1|1862270_1862969_+|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl|CDD|234816
NZ_CP046514.1|WP_077382808.1|1873105_1873927_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_007052305.1|1871923_1872991_-|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl|CDD|237061
NZ_CP046514.1|WP_075662791.1|1861153_1862140_+|ribonuclease-HI	unknown	unknown	gnl|CDD|260010
NZ_CP046514.1|WP_007052308.1|1868102_1868576_-|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl|CDD|234787
NZ_CP046514.1|WP_011068749.1|1863402_1863981_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625326.1|1864162_1865701_+|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994
NZ_CP046514.1|WP_077382802.1|1860803_1861151_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625328.1|1865715_1866840_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	unknown	unknown	gnl|CDD|235536
NZ_CP046514.1|WP_011068748.1|1866937_1868101_-|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl|CDD|235113
NZ_CP046514.1|WP_003829907.1|1884096_1884495_-|30S-ribosomal-protein-S11	unknown	unknown	gnl|CDD|180007
NZ_CP046514.1|WP_156625330.1|1878929_1881110_-|UDP-N-acetylmuramate-dehydrogenase	unknown	unknown	gnl|CDD|379601
NZ_CP046514.1|WP_007052317.1|1859000_1860617_+|pyridine-nucleotide-disulfide-oxidoreductase	unknown	unknown	gnl|CDD|235798
NZ_CP046514.1|WP_007053047.1|1884582_1884960_-|30S-ribosomal-protein-S13	unknown	unknown	gnl|CDD|235358

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_007053049.1|1882378_1882921_-|50S-ribosomal-protein-L17	gnl|CDD|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	1.51666e-56
NZ_CP046514.1|WP_007055304.1|1877922_1878723_-|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	3.46877e-29
NZ_CP046514.1|WP_007053050.1|1881385_1882297_+|tRNA-pseudouridine(38-40)-synthase-TruA	gnl|CDD|211337	cd02570, PseudoU_synth_EcTruA, Eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA. This group consists of eukaryotic and bacterial pseudouridine synthases similar to E. coli TruA, Pseudomonas aeruginosa truA and human pseudouridine synthase-like 1 (PUSL1). Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). No cofactors are required. E. coli TruA makes psi38/39 and/or 40 in tRNA. psi38 and psi39 in tRNAs are highly phylogenetically conserved. P. aeruginosa truA is required for induction of type III secretory genes and may act through modifying tRNAs critical for the expression of type III genes or their regulators.	2.46851e-94
NZ_CP046514.1|WP_007053048.1|1883020_1884016_-|DNA-directed-RNA-polymerase-subunit-alpha	gnl|CDD|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	0
NZ_CP046514.1|WP_008783615.1|1875544_1877113_-|alpha-N-arabinofuranosidase	gnl|CDD|226064	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism].	0
NZ_CP046514.1|WP_117773081.1|1862270_1862969_+|ribose-5-phosphate-isomerase-RpiA	gnl|CDD|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	6.64688e-120
NZ_CP046514.1|WP_075662791.1|1861153_1862140_+|ribonuclease-HI	gnl|CDD|260010	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes. Ribonuclease H (RNase H) is classified into two evolutionarily unrelated families, type 1 (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type 2 (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H is an endonuclease that cleaves the RNA strand of an RNA/DNA hybrid in a sequence non-specific manner. RNase H is involved in DNA replication, repair and transcription. RNase H is widely present in various organisms, including bacteria, archaea and eukaryotes and most prokaryotic and eukaryotic genomes contain multiple RNase H genes. Despite the lack of amino acid sequence homology, type 1 and type 2 RNase H share a main-chain fold and steric configurations of the four acidic active-site (DEDD), residues and have the same catalytic mechanism and functions in cells. One of the important functions of RNase H is to remove Okazaki fragments during DNA replication. Prokaryotic RNase H varies greatly in domain structures and substrate specificities. Prokaryotes and some single-cell eukaryotes do not require RNase H for viability.	5.67618e-62
NZ_CP046514.1|WP_007052308.1|1868102_1868576_-|30S-ribosome-binding-factor-RbfA	gnl|CDD|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	1.2318e-44
NZ_CP046514.1|WP_007052305.1|1871923_1872991_-|transcription-termination/antitermination-protein-NusA	gnl|CDD|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	8.02178e-151
NZ_CP046514.1|WP_156625326.1|1864162_1865701_+|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP046514.1|WP_007053047.1|1884582_1884960_-|30S-ribosomal-protein-S13	gnl|CDD|235358	PRK05179, rpsM, 30S ribosomal protein S13; Validated.	6.20254e-77
NZ_CP046514.1|WP_156625328.1|1865715_1866840_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase	gnl|CDD|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	7.82017e-80
NZ_CP046514.1|WP_011068748.1|1866937_1868101_-|tRNA-pseudouridine(55)-synthase-TruB	gnl|CDD|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	7.32466e-102
NZ_CP046514.1|WP_003829907.1|1884096_1884495_-|30S-ribosomal-protein-S11	gnl|CDD|180007	PRK05309, PRK05309, 30S ribosomal protein S11; Validated.	1.00735e-79
NZ_CP046514.1|WP_156625330.1|1878929_1881110_-|UDP-N-acetylmuramate-dehydrogenase	gnl|CDD|379601	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2. Circularly permuted ATP-grasp prototyped by Roseiflexus RoseRS_2616 that is associated in gene neighborhoods with a GCS2-like COOH-NH2 ligase, alpha/beta hydrolase fold peptidase, GAT-II -like amidohydrolase, and M20 peptidase. Members of this family are predicted to be involved in the biosynthesis of small peptides.	0
NZ_CP046514.1|WP_007052317.1|1859000_1860617_+|pyridine-nucleotide-disulfide-oxidoreductase	gnl|CDD|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	1.38745e-81

Protein sequences

>NZ_CP046514.1|WP_007052308.1|1868102_1868576_-|30S-ribosome-binding-factor-RbfA
MAGTNPRAARIAALIQRVVASSIERELHDKRLASITVTEVRVTNDLQIAKVYWTQLGHEGHEEGERKRAQQALDQAKGHLRSLVGHKAGLRLTPQLQFVFDEVPGEAHEIEDILAVAKKRDEELARARATAQYAGDADPYKHDDEPSDDFEDDSDEE
>NZ_CP046514.1|WP_011068748.1|1866937_1868101_-|tRNA-pseudouridine(55)-synthase-TruB
MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDGEARSRWQTLSAQLTEGGQSGEPTALPTASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFTVLDIRSGFVAGEQAAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGYLTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLDTPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIVPQTHDVAAIIERANAHQAKPVTVFPLA
>NZ_CP046514.1|WP_156625328.1|1865715_1866840_-|bifunctional-riboflavin-kinase/FMN-adenylyltransferase
MDITHLTPDAEGSIEWPSFSNDKKAVVTLGAFDGMHLGHQAVIKRVVELAHQHDAFSVVILFDPRPAFVHGWAASHHGEEPAVQNVDAEALTSVDDRLHRVEQFGVDHVLVVHYTLAFAAMSYIFFLGRLTGKLGMRTLVLGQDAAMGKGREGDVKHIANLAAATGVFELDVVDDRGPGEVRIPRDFKPEAPSEWGEPVDPLANATKAERRAWSKKNQAKAMRAWSSTNVRYLLAHGRIQDANAILGAPHSIEGEVVHGEERGRTIGFPTANLGSDIAGYIPVDGVYAGWLVDGENRWPAAISIGTKPTFSEKTGLNERVVEAYCITEEWIDLYDHKVRVEFVGFLRPQVKFDGPDHLVDELKRNVEETKRLTA
>NZ_CP046514.1|WP_156625326.1|1864162_1865701_+|DNA-repair-protein-RadA
MAKSSVQYVCSECGWNGPKWYGRCPECGQWGTVEEFHEARPAAGSRTAAPGRTSRTQSVTVANNARSAARPITEVGTESVERLGTGFSEFDRVLGGGVVPGSVTLIAGEPGIGKSTLLLQTAGNIARVVAGDSTFRGAGQRSAQQSGRTQGGTSNTVSVQGNAPSVHANTVLYISGEESQAQVRLRASRINAVEPNLLLASTTDLSTVLGLIEQNKPALAIVDSAQTIVSQEVDGISGGSTQVREVASALIDTAKTLDIPVFLVGHVTKDGSIAGPRTLEHLVDVVCQFEGDSETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVTDPAGLFLSGDGPDAANAAPVEGTCVTFTLDGHRSLPIEVQALVTTSVLPTPRRAVNGVDPSRIAMLVAVLYRHSKLNLLSNDLYISTIAGGQAKEPGSDLAIVAALASAATSKPIARATCAIGEISLTGQVRPVPRMEYRLREAARLGFTTAVIPPLRKPVHVEGLQLVESNTLSDALDALGVRK
>NZ_CP046514.1|WP_011068749.1|1863402_1863981_-|hypothetical-protein
MVVAAAVVIILAVLSAFVWPGWAIQKNDGTSTTTQNSQQKTESSEPTKPTIDATALPDDASELLKAMPGSVLNYARTKADASTTWNSASPLEEYTLTYSTGDAAKDVTLVAAQWSSADNAKTQYDALVAAQTGDESASGNVKVSGNVTGAYVVKADASNSKNAVAIWQNDTVVFQATGTKEAVDRFYQKFPM
>NZ_CP046514.1|WP_004268639.1|1863121_1863211_-|AURKAIP1/COX24-domain-containing-protein
MGSVIKKRRKRMSKKKHRKLLRKTRHQRK
>NZ_CP046514.1|WP_117773081.1|1862270_1862969_+|ribose-5-phosphate-isomerase-RpiA
MDKAQQDALKKAAGIEAAKLVENGMIAGLGTGSTVKFLVDELGRRHQEEGLEFTGVTTSRRTQAQAESYGIKIVDIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNQIVWIVDESKVVDTIGKFPLPVEVIPFGAGQVIKKFEARGYKPALRLDADGKEVRTDENNFVVDLHLERIDHPQELAEDLINTVGVVEHGLFLNMVDKVIVGDPNGPRVMTNANK
>NZ_CP046514.1|WP_075662791.1|1861153_1862140_+|ribonuclease-HI
MMLFTLFTTLFCLALGNPTSARDCTACVRVENMTITVSTDGSALGNPNGPMGWAWADHEQNAGGKPGHKHDDHGYDAGGATNGTNQIGELCAVLEALRAHPGPEPLLIESDSQYAINCSTKWVKGWKKNGWKNSQKKPVKNKELIQAIDREISQRPGPVDFRWVKGHAGNEGNELVDELARTYAGDCRSGARDGYLPIEGWQSLLGSEYAHGTDVPPDVQLVLDGKADAASLRKPAAATDQTDAARPETKSSSPLAAQSTQPVQSTQPVPPAKPSGLTVSGTLTFSPAPKTSPYFNGQPMPIKGSIEIEGYVDGDGNLTITNAPFVRH
>NZ_CP046514.1|WP_077382802.1|1860803_1861151_+|hypothetical-protein
MSEASNPKRRRMNQPRPSGRPGAKAMPPGPSATVLELPAISMVPLDAAVEVEPSLSASGLRISMLPSLVLYSPLFSFQIPDAPLLPASPTERKCLVFLVSAHPFTRDGMFFKQSQ
>NZ_CP046514.1|WP_007052317.1|1859000_1860617_+|pyridine-nucleotide-disulfide-oxidoreductase
MSISTPNAISTPNTSPTITTDALIIGFGKGGKTLAAKLSAAGRKVVVAEASADMYGGTCINIGCLPSKSLILSAEQARRDGANSTPETREAAFEAAIKEKRRVTSMLRDKNYHKLADQDNITVITGRAHFTGPHSVEIATAEGPVAVTASKIFINTGATPRIPDIPGIHTTPGVYTSTGLMDLDDMPQRLVIIGSGFIGLEFASMFADFGTAVTVLQHNAEFLPREDADVAAAIRAQLEAQGVKFLFNADTKAIAPAADGGVRLSVAVKGMTRGASQACDSTPAGTGNAHTDITGATDTTTTTSPTSNPTDHATMSHVQTKPSDDGEPRFAEPAEARFCLTTDAVLVATGRTPNVEGLHLEAAGVELTERGAVKVDELLRTTAADIWALGDVNGGPQHTYISLDDYRVVWSQLNGSDRPYTVKDRKHVPSSTFLATPYSRVGLNEREAKAAGLDYVVKRLPVAAVPKAQVMRRPDGLMKAIVERNTGRILGAMLLSVESHEVINIVKLAMDLDAPASTLRDMVFTHPTIAEALNDLFA
>NZ_CP046514.1|WP_007052305.1|1871923_1872991_-|transcription-termination/antitermination-protein-NusA
MELDLTGIHKLAAEQGIDPETLDDALAEALRLAYLKTPHAAKHARVELDERSGNFTVWAADEIPVEPTEDNPYPAPKLGEEYDDTPRDFGRLAAATARQVITQLFRRAEDEKVFGAFSGQKGKLITGIIQQDASDPSNVHVAMGDVEAILPRREQVPGERYRHGERIRVYVVNVARGIKGPEIVVSRSHPELVRKLFEREVPELVSGAVSIMAIAREAGARTKIAVKANTDGVNPKGALIGPGGARVRAVMENLGPEKIDIVDYSDDPAKFVAAALSPAVATGVQVISEKNKTAIAFIHDDQLSLAIGKEGQNARLAAKLTGWKIGIESAEAHAKKVAAEKAAQAAAEAAAPEAE
>NZ_CP046514.1|WP_077382808.1|1873105_1873927_+|hypothetical-protein
MASVLCASAMLCSLSACSMPRLAGRAEAEAQMTPCEKAMTLAGYATHPAEGTPLLEQYATGLAAPLAWIDVAGYCSGRFAEGTLRDAQTKQWLAFLADKFGQSAPEVTPARLDGVTSANVDRSVLDAMAVAEDRAGFAIEVLAARGQTAGATLALSDMHKTAGQQLVALANGNFDDSGAQSSSSGQNDPRQKVYAIDQLLANPTTIADKASGQTVPTAAAIEMDCARAQIKAVTESKSSTESDTLLILAALAAKHAYTAFQLGYPATDAALFE
>NZ_CP046514.1|WP_008783615.1|1875544_1877113_-|alpha-N-arabinofuranosidase
MSEHSHDNKPGELEESRLVVDNDFEVAPVNDRLFGSFVEHLGRCVYDGIYEPGHPEADEDGFRKDVIELVKELGATTIRYPGGNFVSGYRWEDGVGPRDERPRRLDLAWHSTETNQFGLHEMAKWLEKTGGNELMEAVNLGTRGLEEALDLLEYANIPGGTKLSEERRANGADQPFGIKMWCLGNEMDGPWQTGHKSAEDYGTLAASVAAGMRAIDPNVELVVCGSSSHVMDTFGKWEETVLEKTFDNVNFVSCHAYYHPELQPDGTRDMKSFLASGVDMDGFINDVAAAIDATKARLKSKHDVFISFDEWNVWYLNEEPSKNPEGIGNWPVAPRLLEDVYSAADAVVFGDLMITLLKNADRVHAASLAQLVNVIAPIMTEPGGPAWRQTTFYPFSLTAKLAKGGTVLEPKLASGTYETDKYGEVPTINSVAVRGEDGTISVFVVNRSMEAANDFAIKLPEGFALSAVEAQTLHEDDLLAKNTLEDQNRVVLHPNTTITSDADTGTVRVTLPPVSWTAVHVK
>NZ_CP046514.1|WP_007055304.1|1877922_1878723_-|transglutaminase-family-protein
MKKLVFDYEMRLSFSAPVTDHRFQLRCIPSTGPRQQVIDVEVKIQPETELETTIDSFDSVVMTGFIPEPHDIFSYSVTGIAFVDNAHIHKEAYKPLYRFNSALTIPGPNVEAMIAVCRERLAALPSDATPVQQAAEVMDEVYKAFVYTPGSTTIRTTAEQALAQRKGVCQDYAHVMLSVCRHVGLTARYIAGLLGGEGATHAWVEVYQDGRWVGLDPTHNRLVDDSYITIAHGRDYRDCMLDIGIFSGYNVQQSQWVNASVHEQVA
>NZ_CP046514.1|WP_156625330.1|1878929_1881110_-|UDP-N-acetylmuramate-dehydrogenase
MIESAARRLAHELVNRREAINRELSRNGVRFGIYKNGEYHDRLFPYDPVPRIIESDEYDELEKGLKQRVNALNAYLKDIYSDKAIIHDGVVPEEYVYTSAGYFPQVNGVTPPDGIFAHIAGEDLVQGEDGRWWVLEDNLRIPSGASYPLFVRDIERRISPRLFRDVRIRDNREYPRLLRKAMDFVSTEGIAVVLTPGRYNSAFFEHAYLAEKTGAALAFPEDLEVVDNKVYFLDYAGKRHRVGVVYRRLSDEFLDPFAFNPDSVIGVPGILSAYRAGNVAIVNAPGNGAADDKAIYYFVPQMIKYYLGEEPILNNAPTYMPMFEADRKEVLNRMGELVIKDVAEAGGYGVVFGSSLDAAAREELANRIKEEPRRFIAQEVIQFRDIDVVDPKTGEMSPRKCDLRAFVVTGKNTHVWYSGLTRYSSVPGQMIVNSSQGGGFKDTWVLAPESGVEHEYGAETQVANLLNQSRRHSLSLVTASKADNLYWLGRYTERAFTTLNQFFPFYDRVMDTDVDAFRPFAHALDLPEDFEDFDGFVNSFLYDGSNPDSVRSAVTSAFNNAVILRPELSSRLLQYVELAMTNITDAAKYAADAEDIYKQRDITDDMLAFWGGIENSPVDPTLKAFIFIGKYLERIDLYTRFGLTMEELEAPLKKLAAYSMTLDGMPLPSCFADGLSWLVGQLPSRGYQEVADLLKKYLDDYSGRVSALAIKDMGSLSSMNMDAKRP
>NZ_CP046514.1|WP_007053050.1|1881385_1882297_+|tRNA-pseudouridine(38-40)-synthase-TruA
MTRLRIDLAYDGGGFYGWAKQPNLRTVQGTIEDALHKVLRVPTDDAAEPLRLTVAGRTDTGVHASHQVAHLDVSDEVLNRCVGHMTIPVTEALTRRLKAVLPSDIVIHGIAVAPVGFDARFSALERTYVYRVADRSSEVDPRLRGCVLTVDEALDLELMNRAASLTIGLHDFGSFATPNPGGTTIREVKTAYWRRVPITPLVPDEMASHEAYRTPSLESGLVVFTIVADAFARNMVRSLVGSCIKVGSGRKSLEWFAGKMAEPVREGSSGPIAPQGLTLEHIAYPADDQLAARAEAIRAVRTL
>NZ_CP046514.1|WP_007053049.1|1882378_1882921_-|50S-ribosomal-protein-L17
MPTPKKGPRLASSPAHERLMLANMATSLFQNGRITTTLPKAKRLRPLAERLITFAKRGDLHSRRRVMRVIRNKSVVHILFTQIAEQMEQREGGYTRIVKIAPRVGDAAPAAVIELVTEPVAKKAVVKEAEAAAKVAEEEAPAVEAEATEAAEAVEAPVEETAAAEAEAPAEEAADAEKAE
>NZ_CP046514.1|WP_007053048.1|1883020_1884016_-|DNA-directed-RNA-polymerase-subunit-alpha
MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGALHEFTTLPGVQEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEAVAGDITPPAGVTIANPEQHIATLADDGELEIEFTVERGRGYVPAQMNKQDNDEIGRIPVDSIYSPVLKVSYKVEATRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNAQAEGVEVGPAPVAEETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVSHTEQDLLDIRNFGMKSIDEVKEKLQTLGLSLKSSPMAFDTNNLEGGTFFSPEDE
>NZ_CP046514.1|WP_003829907.1|1884096_1884495_-|30S-ribosomal-protein-S11
MAAPKQAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRKSTPYAAGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQAHNGVRPPKRRRV
>NZ_CP046514.1|WP_007053047.1|1884582_1884960_-|30S-ribosomal-protein-S13
MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGISPDIRVKDLTDEQLITLRDYLEANYKIEGDLRREVDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGKKKATK

Crispr_ID: NZ_CP046514_8

• CRISPR_ID: NZ_CP046514_8
• CRISPR_location: 2007247-2007320
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046514_8

Consensus_repeat	Method
AAATGACGAACCGGGACAGCGAA	CRISPRCasFinder

spacers of NZ_CP046514_8

>8.1|2007270|28|NZ_CP046514|CRISPRCasFinder
ATCTGTCCCGGTTGTCCCAAAAGAGACG

CRISPR arrays and Neighbor proteins around NZ_CP046514_8

CRISPR arrays

The CRISPR arrays of NZ_CP046514_8

>merge|NZ_CP046514|8|2007247-2007320|CRISPRCasFinder
AAATGACGAACCGGGACAGCGAAATCTGTCCCGGTTGTCCCAAAAGAGACGAAATGACGAACCGGGACAGCAGA

>NZ_CP046514|8|7|2007247-2007320|CRISPRCasFinder
AAATGACGAACCGGGACAGCGAA	ATCTGTCCCGGTTGTCCCAAAAGAGACG
AAATGACGAACCGGGACAGCAGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046514.1|WP_007053061.1|1996694_1996943_-|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_CP046514.1|WP_007053060.1|1994934_1996626_-|GTPase-ObgE	unknown	unknown	gnl|CDD|237045
NZ_CP046514.1|WP_007053065.1|2002118_2003063_+|AEC-family-transporter	unknown	unknown	gnl|CDD|223751
NZ_CP046514.1|WP_007055074.1|1993800_1994934_-|glutamate-5-kinase	unknown	unknown	gnl|CDD|235460
NZ_CP046514.1|WP_095346939.1|2016019_2017285_+|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP046514.1|WP_007057927.1|1997425_2000470_-|Rne/Rng-family-ribonuclease	unknown	unknown	gnl|CDD|273254
NZ_CP046514.1|WP_156625361.1|2000806_2002081_-|succinyl-diaminopimelate-desuccinylase	unknown	unknown	gnl|CDD|349899
NZ_CP046514.1|WP_095346941.1|2017361_2018294_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176115
NZ_CP046514.1|WP_007053062.1|1996965_1997274_-|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|235510
NZ_CP046514.1|WP_007054190.1|2010197_2011514_-|homoserine-dehydrogenase	unknown	unknown	gnl|CDD|235783
NZ_CP046514.1|WP_007058798.1|2008990_2010103_-|homoserine-kinase	unknown	unknown	gnl|CDD|234920
NZ_CP046514.1|WP_010081272.1|2004683_2005757_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP046514.1|WP_138267155.1|2003238_2004687_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|225669
NZ_CP046514.1|WP_022527888.1|2007399_2008854_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|178901
NZ_CP046514.1|WP_022527887.1|2006227_2006404_+|DUF1778-domain-containing-protein	unknown	unknown	unknown
NZ_CP046514.1|WP_156625365.1|2018387_2019641_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|224090
NZ_CP046514.1|WP_008783380.1|2013269_2015132_-|arginine--tRNA-ligase	unknown	unknown	gnl|CDD|223097
NZ_CP046514.1|WP_118214282.1|2019689_2021015_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|236486
NZ_CP046514.1|WP_095346937.1|2015345_2016011_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP046514.1|WP_156625363.1|2011674_2013267_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046514.1|WP_007053061.1|1996694_1996943_-|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	3.06993e-50
NZ_CP046514.1|WP_007053060.1|1994934_1996626_-|GTPase-ObgE	gnl|CDD|237045	PRK12296, obgE, GTPase CgtA; Reviewed.	0
NZ_CP046514.1|WP_007053065.1|2002118_2003063_+|AEC-family-transporter	gnl|CDD|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.33178e-36
NZ_CP046514.1|WP_007055074.1|1993800_1994934_-|glutamate-5-kinase	gnl|CDD|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	4.59837e-176
NZ_CP046514.1|WP_095346939.1|2016019_2017285_+|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.87416e-50
NZ_CP046514.1|WP_007057927.1|1997425_2000470_-|Rne/Rng-family-ribonuclease	gnl|CDD|273254	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family. This model describes ribonuclease G (formerly CafA, cytoplasmic axial filament protein A), the N-terminal domain of ribonuclease E in which ribonuclease activity resides, and related proteins. In E. coli, both RNase E and RNase G have been shown to play a role in the maturation of the 5' end of 16S RNA. The C-terminal half of RNase E (excluded from the seed alignment for this model) lacks ribonuclease activity but participates in mRNA degradation by organizing the degradosome. [Transcription, Degradation of RNA].	7.72415e-154
NZ_CP046514.1|WP_156625361.1|2000806_2002081_-|succinyl-diaminopimelate-desuccinylase	gnl|CDD|349899	cd05647, M20_DapE_actinobac, M20 Peptidase actinobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase. Peptidase M20 family, actinobacterial dapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE) subfamily. This group is composed of predominantly actinobacterial DapE proteins. DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. It has been shown that DapE is essential for cell growth and proliferation. DapEs have been purified from proteobacteria such as Escherichia coli and Haemophilus influenzae, while genes that encode for DapEs have been sequenced from several bacterial sources such as the actinobacteria Corynebacterium glutamicum and Mycobacterium tuberculosis. DapE is a small, dimeric enzyme (41.6 kDa per subunit) that requires 2 atoms of zinc per molecule of polypeptide for full enzymatic activity. All of the amino acids that function as metal binding ligands are strictly conserved in DapE.	0
NZ_CP046514.1|WP_095346941.1|2017361_2018294_+|LysR-family-transcriptional-regulator	gnl|CDD|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.20932e-31
NZ_CP046514.1|WP_007053062.1|1996965_1997274_-|50S-ribosomal-protein-L21	gnl|CDD|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	3.48911e-33
NZ_CP046514.1|WP_007054190.1|2010197_2011514_-|homoserine-dehydrogenase	gnl|CDD|235783	PRK06349, PRK06349, homoserine dehydrogenase; Provisional.	0
NZ_CP046514.1|WP_007058798.1|2008990_2010103_-|homoserine-kinase	gnl|CDD|234920	PRK01212, PRK01212, homoserine kinase; Provisional.	4.23972e-87
NZ_CP046514.1|WP_010081272.1|2004683_2005757_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	3.69135e-101
NZ_CP046514.1|WP_138267155.1|2003238_2004687_-|ABC-transporter-permease	gnl|CDD|225669	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	1.10606e-06
NZ_CP046514.1|WP_022527888.1|2007399_2008854_-|NUDIX-domain-containing-protein	gnl|CDD|178901	PRK00148, PRK00148, Maf-like protein; Reviewed.	1.68639e-59
NZ_CP046514.1|WP_156625365.1|2018387_2019641_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|224090	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism].	2.09052e-119
NZ_CP046514.1|WP_008783380.1|2013269_2015132_-|arginine--tRNA-ligase	gnl|CDD|223097	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	1.10707e-165
NZ_CP046514.1|WP_118214282.1|2019689_2021015_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP046514.1|WP_095346937.1|2015345_2016011_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.88081e-16
NZ_CP046514.1|WP_156625363.1|2011674_2013267_-|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	9.02285e-73

Protein sequences

>NZ_CP046514.1|WP_022527887.1|2006227_2006404_+|DUF1778-domain-containing-protein
MTSLQWALSNLLAAADRDIHEAHIIRLNSKAWNDFTAALNEPMGLRLNELLERDPIWT
>NZ_CP046514.1|WP_010081272.1|2004683_2005757_-|ABC-transporter-ATP-binding-protein
MQQPQPAPGPAAQPQQSQQPQQFQQPASHTQQWAPVIEAHDLVMDYTASMARAQAGHGVTGVIPAGTGAGYASANPAAAGPGAIQAGQPSQPAQPGFAMPTMHTLALNHVNFTLREGETVAVMGPSGSGKSTLLHALAGIIKPTAGTVIFRGADLSRMSDAERTKLRRNDFGFVFQSGQLLPELPAVENIALPMMLDGMPYRTATDTAILWLERMGLRALATHRPGEMSGGQMQRIAIARALAVKPAVVFADEPTGALDQATGREVMGILMAAARDNGSAVVVVTHDPNVASFCGRTVMMQDGRLHQTDANPNSAPAGGGCQPQADWGWPEGAEPPSASLRSAAPAGGSETTAGGAR
>NZ_CP046514.1|WP_138267155.1|2003238_2004687_-|ABC-transporter-permease
MSTFALWRLFHRPGLRGSAGHTSMLAIIAFAAATTIFLTVLGGVHGFIWRASADHTVACAFDFGACRPDTVAAWKRQISDPTSLAQFSTAYVALAVFACMLLVVPFVALAGSAARLAASRRDARLAALRLAGATTGQVVRLTALDAAGQALIGALIGIAGYCALMPAVMLIPFQEQRFTFEQLWVGPLALVITLAGVAILALISSLVTLRRVAITPLGVTSRTATALPSGTRMVLFVVVVVVAMIVFKNPAMLAQAGQAVMYGVIIGFMLLCFALVNLIGTWVITARARAKAKRPKDAATMIAMRRILDNPKRAWRNVSGIALAVFIAGITSICGFFGSAAVVDDANDPFTVFIRDIGTGGILTLVFAAVLAAVSSGVMQAGSVYDQAGEYRMLVLEGTDVKTLNRARFIEVLTPLNIVVIVAGGCSMLLMAPLFAASMTEPATLASFFGGLVLCYALVSIGAFASNHVAASLNLTDYRADD
>NZ_CP046514.1|WP_007053065.1|2002118_2003063_+|AEC-family-transporter
MPGLISAMQGFCVIGIVIAVGYVAARMRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPIFDIFHPSIIVAFFSAVLVGVVFLVLNRMFFHLNAPDATIGALNSLYLNSNNIGLPIATYILGNPALVAPILVMQQAIFTPVGLTVLDVTTKGKVSIKEIAKQPLHQPLLIGSLLGIVVSAISAKSGWFPVPKFIFDPIDMIGDSAVPMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKNIIMPIIAFLLAYFVMGFRGSELYACVVLAALPTGQNVYNYAARYNVGLTFARDGILMSTMTSPVFIAIIAALLS
>NZ_CP046514.1|WP_156625361.1|2000806_2002081_-|succinyl-diaminopimelate-desuccinylase
MYSAAKSHVVSVLGPPPTRYAVHMTLELNRTASTAEQLNGLLTQIMENFSVSDHEGPLTDEVEAFLNEQEHLTVRRHGDTVVASTDFGKPSRVILAGHLDTVPVIDNFPPKWLEPGDSLIREEIAHAHPEDRVLWGRGATDMKASDAVMLYLAATLDGRTPETTPKVDLTYVFYDHEEVVAEKNGLRKVVEAHPDWITGDFAIIGEPTNSGIEGGCNGTIRFDVVTHGVVAHSARAWMGENAIHKAADILNRLNAYEPATVNVDGLDYREGLNATLISGGKGTNVIPDECRVHVNYRFAPDKSLAEAKALMMGADAGAELGNGEHVATGGVFEGYGIEMKDESPSARPGLNAPLAQDLVRLVKERTGRDPLAKLGWTDVARFSQLGIPAVNLGAGDPLLAHKHDEQVPESDLTAMAAILTDWLV
>NZ_CP046514.1|WP_007057927.1|1997425_2000470_-|Rne/Rng-family-ribonuclease
MPTDNREGFVNDGTDNSTVSNADSAAAVNAAPAAASQPAEPVRRRRGGRRVVRGTGAAGASLELQVQERAPLFEAPALPDAGTAADSKSADSSDSDESSDSQDSAERPTRRRSRRAASAVADSDSEDDRPRRSRRTVSADDFDDDDAPRSRRRSVVDDDDYDEDRPVRRRSRSRQSDDDDYEDRPVRSRSRRASMDMDDDDEDRPVRRRSRRAVADTHEDTPDERLFDAVESLPSGHEAVRRGKPMTSLLFQEPVLPAAVDAHDTADTRDDDVDDDERPSRRSRRSRSHDDDDAQPRSRRRDDRDDRGRNAADRDASRDASRNAAAGDANASANTDHDDFDSDDASDSRRSRRSRRLNAQERRAAAEVEQIEEDLELDDIAYSPIAEEEGDEESDATRTRSRRRRRRGSRGETGANGEHDTAENDAEDTRSRRRDDRDDHDRDRDEDDEEQTVTRRRRRRRGGKNGEGTDDQSQNSEQPLVRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLMEQDFLARRENVDRLMVVREKEHHTQISVVEDNVLVEHYVSDIQEVQTVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDAARLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERSRLKNIVSKIAPKDMGVIIRTAAEGASEDAIVKDLESLVRQWERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDDFSKLIVEGDKVYDRIEEYLDTMAPDLKDKLEKWDPAEHEGKDVFDKWSIDSQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGKGKSLEETVTRCNLEASEEIARQLRLRDIGGMVMIDYVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCKGRGFILHDQPTVSADYDDPYALRGGDPFVKTNKHGRGTAPAPEPAGSSADVKAKLAQIAAAAVAANNTAEE
>NZ_CP046514.1|WP_007053062.1|1996965_1997274_-|50S-ribosomal-protein-L21
MYAIVKAGGHQEKVEVGDVILVNRLDAKKGDTVEFPVSLVVDGDKVTLAAADLAKVSVKAEVVNDEAKGPKISIQKYKNKTGVARRKGHRQKLTIVKITAIA
>NZ_CP046514.1|WP_007053061.1|1996694_1996943_-|50S-ribosomal-protein-L27
MAHKKGASSSRNGRDSNPQYLGVKKFGGEAVVAGNIIVRQRGTNFHPGHNVGMGKDHTLFALTDGSVKFGVRRDRKVVDVIA
>NZ_CP046514.1|WP_007053060.1|1994934_1996626_-|GTPase-ObgE
MSDFVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVVFVADRNATSLLDYRFMPHRVAGSGTMGLGDNKDGSKGEDLILPVPCGTVVFEARGEQGKAKHPGAQLADLRHEGDRCVVAQGGAGGLGNIALANKTRRAPGFALLGELGEERDVILELKSIADVALVGFPSAGKSSLIAAMSSAKPKIADYPFTTLVPNLGVVIAGDSRYTIADVPGLIPGASEGKGLGLEFLRHIERTEIIAHVIDCATLEPDRDPMSDYHALENELALYADKLELPLGAIPIPERPRIVILNKIDVPEAKELAEFVRPEFEKLGLKVFEISTASHEGLKELNFALSALVHEMREEVANREQAEEEARVVIKPLETKGRRPRRADEGGSALEFTVERRELGNGEVFFEVRGVKPERWVMQTNFDNDEAVGYLADRLAKLGVEDELRRKGAHPGDEVRIGRGARMVEFDWDPTISAGAEMLDGSNLGARGKDLRLEELDPRTHRRSNAERRAQYHEMMDARAAVRDAMMAERKAGHWADPTVDDDRHDETSLFGHGESSEDGETEE
>NZ_CP046514.1|WP_007055074.1|1993800_1994934_-|glutamate-5-kinase
MSTPSQAEVRRMIAAAGTIVVKVGSSSLTQPSGHLDPDKLDALAAALAQVRLMGGRVVLVSSGAIAAGFGPLGFDSRPVDVATQQATAAVGQGLLMARYETAFGRFGIRVGQILITAEDTIRATQYRNVERTLDRLLDLGVVPIINENDSLASNEIRFGDNDRLSALVANLVRAEALVLLTDVDALYTAPPSQPGSRRVEYVPNVIDALGDIQVSGSGSKVGTGGMVTKLEAARVAAVSGIPTVLTCASNAGPAMMGDPVGTVFAPVKARGSSRRLWIGFAADPRGTIVVDAGAGQAIRGGRASLLAAGALEVHGDFSAGDPVWIDAESGEHLARGLAGFDSEEIPQMLGRNTAQLKRFLGPQYAHPLVHRDNLVLV
>NZ_CP046514.1|WP_022527888.1|2007399_2008854_-|NUDIX-domain-containing-protein
MPIPLILASKSKPRRDVLYSAGICPTIRVSHVDEPAALEAAAREEGVTVDDLSIKQRVMILAAAKAEAVHRAYRDVADTAAAATGDRVIAYPLKAKEIKDSEREAAVEDLREAAAGKPIDYSKAEIATTRDFSGIDMPTVTEPIATAIAGQPGLTEATVGPLILGCDSMFLLGGECYGKPHSEAVARERLKRMSGATGELWTGHCLIDFATGRTVRGASHAKVHFGEFTDADVERYIATGEPLEVAGSFTLEGFGGAFIDSIEGDPHGIIGLSLPLARHLAGELGITWTDLWNVGRGELEPESKASGNQHAGILPPVENVHQPGDGWVDCACGRKHWGTNGASGILLARRDPVSGKVTHVVMQHRAAWSAEGGTWGIPGGATADGESPIEGALRESYEEANITPEDIEVVGSYREDHGPWAYTTVFAFEKPGHTVEPKANDDESMEICWVPIDDVPNRKLLTAMKTDWPRFAARLDELACAGHR
>NZ_CP046514.1|WP_007058798.1|2008990_2010103_-|homoserine-kinase
MNPICNSVHVRVPATSANLGSGFDTVGLALDYHDELTFTLNDDPNDGIAHVIIHGEGADALPCDETHLVVSTFRRACATFGLGRLGFTLEATNNIPQARGMGSSAEAIVAGIAAAAAFAQTGDLNRPAVFDMAAQIEGHPDNVAPAVFGGLTVSWDFETAEGVGSVAVPGGEPLHGGFHAVNYPVDPSITAAVFVPDYELSTEKARQALPRELPYKDAVYNVSRVGLLPAAMNPVVLAQAAQQGKSGVAAAPAQDADTCACSGGTRESAFADELAAAQAQSNALLFTATQDKLHQPYRGALMPPSTELIALFRSKGYAAAVSGAGPCVLVLHYGNAREAIDQIASEQLASGHWRVLHLPINTAGVEIERR
>NZ_CP046514.1|WP_007054190.1|2010197_2011514_-|homoserine-dehydrogenase
MARNNETPIRVGLLGAGTVGSQTARLIVEQKDELSARIGRPIELTGVACLDPKETEKFPWIDQSIVTTDTLSVATNSDIVIELIGGTTVARKFVLAAIESGASVVTANKALLAKYGPEIYSAAEAKGVDIYFEAAVGGAIPFLRPLRESLVGDKVTSMLGIVNGTTNYILDEMTTKGLQFDDVLKDAQAKGYAEADPTGDIEGYDAANKAAIMATLGFHTSVTIDDVSVEGITKITADDIAAATAEHKVIKLLAVVENGEAGVSARVYPALIDENHPLASVHGSFNAVFVKAEAADDLMFYGRGAGGAPTASAVVGDVVTEARHIAAGCTGPSIPLYKNLPKAPITASKAAFAVRFLIHDKPGVLAAIAAEFAKNGVSINGVNQDLKPTMTDPGYDGEIQQLRIVTHLTDEETLRNTVKAVQALDFVTGDPSILRVLD
>NZ_CP046514.1|WP_156625363.1|2011674_2013267_-|diaminopimelate-decarboxylase
MPISPIWPAATTVNAEGSIEFHGRTAESLLDEFGSPLYLIDTDEVVARARHFVRAAAEAFNTSTTHVSFAGKAFLSKEVVRLVTEAGMFVDTCTMGEMKIALAAGVPGRRLVLHGNNKSDEEIALAIEQGFAKIVVDEPDEPERVAAIARKLGKRARVMLRVTVGVHAGGHEYISTAHEDQKFGVPLLAAGADAAVLDVLNDLKDVTPAAANARISATHSPENGAEKTEKSERELHYDVKYPYDLSHEEVSDTDKALAAAMEAIADGPSIAVLKTILANQDVLELVGAHSHIGSNIHDADAFIHAAKRMMLLRKTLWATDAYILPEIDLGGGYSVAYTDGEDSMDIDVELARLADAVNSTNRALGMPAPAISFEPGRYIVAPAGVTLYRVGTIKHVHLSDAKDSDGNPIAERVYVSVDGGMSDNIRPALYGADYTARLANRTGSAETMLARVCGMHCESGDIVVHEVQLPADLKRGDILAVPVTGAYGRAMASNYNQALIPAVVAVSESGAHVMLRRQTVDDLLNLDVSE
>NZ_CP046514.1|WP_008783380.1|2013269_2015132_-|arginine--tRNA-ligase
MSPEALSELISSIAHNLVAAGQAGALTDELIPPVDKLAVMRPKDRAHGDWASNIAMQLAKKAGMKPRDLAEPFAAALAEADGIAKVEVAGPGFINITLDSASAAAVVDTVLAAGAVTDADKHLNKVNEYGRNDHLGGQTLNLEFVSANPTGPIHIGGTRWAAVGDAMARVLEANGAKVVREYYFNDHGEQINRFAKSLVAAWAEANNLGEAGYQTETPCDGYKGAYINEIAARVQAEAESDGVDLTALAHQDQGLNDDGEPLGEADTEVREEFRKRAVPMMFDEIQKSMKDFRVNFDVWFHENSLYADGKVDAAIEELKSRGDIFDKDGATWFESTKHGDDKDRVIIKSNGEFAYFAADIAYYWDKRHRAENPADVAIYMLGADHHGYIGRMMAMCAAFGDEPGKNMQILIGQLVNVMKDGKPVRMSKRAGNVVTIDDLVSVVGVDAARYSLARSDYNQNFDIDLALLASHTNDNPVYYVQYAHARSKNVDRNAAAAGISYEGADLALLDTEADGEVLAALAQFPSVLATAADDRQPHKVARYLEELAATYHKWYNVERVVPMALTDPETRGDDEARKALEIAKNPEPARAAARLKLNDAVQQVIANGLDLLGVTAPEKM
>NZ_CP046514.1|WP_095346937.1|2015345_2016011_+|TetR/AcrR-family-transcriptional-regulator
MARNAHPEVTRTRVLDAAQRLFMTKGYEHTSIQNIVDELGDLSKGAIYHHFKSKEAILEELTNRDNNVQDDFNESVMNRTDLTALEKFRVLWRHSMTEQDHVQIMRAAMPMLSDPVSFAANMQVWSKHLPERFLPLIEAGVKDGSIPTEYPREAAELLSLLPNYWLMPYFYPATLPEMEHRIRCLATMLDAIGVPIFDDELITVAAKGMMTFAGEPEKGSE
>NZ_CP046514.1|WP_095346939.1|2016019_2017285_+|MFS-transporter
MKPENDIAGTATQRPLLSRDFVLLVAGQGISLFGNVMLRFAMSMWVLDETGSATIFASVLAISIVPTILLSPFGGVLADRVNRRTIMVALDAISAVLVLASAIVFATTGFHIVAIATMQVLLAVLGAFETPTVQAALPQMFRQYGPATMRQGMAVINQVQQLSSLLPSFLGGVLYAMFGIRLMMIIAIASFAGAAALECFIRLGAPDRGDEELPTPLEDLKAGVRFLIKDRPNVFRLLLFAAALNFVLIGYSGVGFPYTIRTVLGFDATVYGIADGLIGVSGVAGAFIAGLFAARLTMHWMPGLMATLTLAMVPQGIVFLLPVDAWTKLVVLIVFACGTMVASCFTNLIAVPAIQLSTPEAMTGKVMSMAAAVSMCAQPLGQMVYGWAYDQMPVAIVLFITTALFAVLTVLMVPLAKQFED
>NZ_CP046514.1|WP_095346941.1|2017361_2018294_+|LysR-family-transcriptional-regulator
MATLNPQSLVTLWQIEQYGSFSATAKATGWSQPAISQQIKKLEAQCGSTLVQRTSHGVELTATGSMLARHGEAIADRLERAAREVEDYRHHRFAHLHLVAPPSICSTIAARTVVKLSMFTDIELSLIQMEPPEAIGLISQGKADAAAVFRYSSIPNFLHIGDDLTFHSLGYDPMRLLVRRSSSIAKRFEETGEPVPLSAAKDEHWIAGCPTCRANLVKLATRAGFKPDIRHCTDDYWATQNLVEVGMGVSLVPALDTHINLQGDLVACPIADDFAAREVGIVTRAGDHRPALGSLLEELERTALKYLSAK
>NZ_CP046514.1|WP_156625365.1|2018387_2019641_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSMNNIPQSTTLSNATAGTSCFDANHIDVTTIEDLEQVGSDKWTRYPGCIGAFIAEMDYGLAPCVAEAIEEATERGALGYIPDPWKKEVARSCAAWQRRYGWEVDPTCIRPVPDVLEAFEVFLREIVRAGNSIVVPTPAYMPFLSVPRLYGVEVLEIPMLCAGAGESSGRNDEWLFDFDAIEQAFANGCHAFVLCNPHNPIGKVLTREEMLRLSDLAAKYDVRIFSDEIHAPFVYQGHTHVPFASINRQTALQAFTSTSASKSFNIPGTKCAQVILTNPDDLELWMRNAEWSEHQTATIGAIATTAAYDGGAAWFEGVMAYIERNIALVNEQMRTRFAKVRYVEPQGTYIAWLDFSPLGIGDPANYFFKKANVALTDGRECGEVGRGCVRMNFAMPYPLLEECFDRMAAALEADGLL
>NZ_CP046514.1|WP_118214282.1|2019689_2021015_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MAENPDDVLHVEGGKPLNGTIKVRGAKNFVSKAMVAALLAPGKSVLKNVPEIRDVHVVSDLLRLHGVDVDVDGANGIVAIDASRVQLADVADVDTLSGSSRIPILFSGPLVHRLGEAFIPALGGCAIGGRPIDFHLETLRKLGATVDKEHKDGIHITAPNGLHGAKIHLPYPSVGATEQTLLAAVLAEGKTELSGAATEPEIMDLVCVLQKMGAIISVDVDRTFRIEGVKELQGYTHTSLTDRIEAASWASAALATHGDIFVKGATQPEMITFLNVFRKVGGKFEVTDKGIRFWHPGGDLKPVAIETDVHPGLMTDWQQPLVVALTQANGLSIVHETVYENRFGFTKPLVEMGATIQLYRECLGSLPCRFRQRNYKHSAVIFGPTPLTGRDIDVPDLRGGFSHLIAALAASGPSDVHGISLIDRGYADFRGKLEALGADFD

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046514_4	4.1|1257328|19|NZ_CP046514|CRISPRCasFinder	1257328-1257346	19	NZ_CP046514.1	1257376-1257394	0	1.0

1. spacer 4.1|1257328|19|NZ_CP046514|CRISPRCasFinder matches to position: 1257376-1257394, mismatch: 0, identity: 1.0

ggacatatccatgtggatg	CRISPR spacer
ggacatatccatgtggatg	Protospacer
*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046514_4	4.1|1257328|19|NZ_CP046514|CRISPRCasFinder	1257328-1257346	19	NZ_KP691636	Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B1, complete sequence	3407-3425	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_015066	Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence	3040-3074	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NZ_KP691638	Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NZ_KP691635	Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NZ_KP691633	Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_002635	Bifidobacterium longum KJ plasmid pKJ36, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	3696-3730	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_004443	Bifidobacterium longum VMKB44 plasmid pB44, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_004943	Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence	309-343	0	1.0
NZ_CP046514_6	6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder	1666174-1666208	35	NC_006843	Bifidobacterium longum plasmid pTB6, complete sequence	225-259	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	587-623	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8087-8123	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4652-4688	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	347-383	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3137-3173	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_015066	Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence	3040-3074	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NZ_KP691638	Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NZ_KP691635	Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NZ_KP691633	Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_002635	Bifidobacterium longum KJ plasmid pKJ36, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	3696-3730	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_004443	Bifidobacterium longum VMKB44 plasmid pB44, complete sequence	231-265	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_004943	Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence	309-343	0	1.0
NZ_CP046514_6	6.104|1666175|35|NZ_CP046514|PILER-CR	1666175-1666209	35	NC_006843	Bifidobacterium longum plasmid pTB6, complete sequence	225-259	0	1.0
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	587-623	0	1.0
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8087-8123	0	1.0
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4652-4688	0	1.0
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	347-383	0	1.0
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3137-3173	0	1.0
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	609-645	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	631-667	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8109-8145	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8131-8167	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4674-4710	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4696-4732	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	303-339	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	325-361	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3093-3129	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3115-3151	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3683-3719	1	0.973
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3752-3788	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	609-645	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	631-667	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8109-8145	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8131-8167	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4674-4710	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4696-4732	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	303-339	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	325-361	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3093-3129	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3115-3151	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3683-3719	1	0.973
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3752-3788	1	0.973
NZ_CP046514_6	6.46|1666389|36|NZ_CP046514|CRT,CRISPRCasFinder	1666389-1666424	36	MK415409	Phage YS1-2_2434, complete genome	20795-20830	2	0.944
NZ_CP046514_6	6.55|1667036|37|NZ_CP046514|CRT,CRISPRCasFinder	1667036-1667072	37	MK415409	Phage YS1-2_2434, complete genome	1075-1111	2	0.946
NZ_CP046514_6	6.107|1666390|36|NZ_CP046514|PILER-CR	1666390-1666425	36	MK415409	Phage YS1-2_2434, complete genome	20795-20830	2	0.944
NZ_CP046514_6	6.116|1667037|37|NZ_CP046514|PILER-CR	1667037-1667073	37	MK415409	Phage YS1-2_2434, complete genome	1075-1111	2	0.946
NZ_CP046514_6	6.44|1666245|36|NZ_CP046514|CRT,CRISPRCasFinder	1666245-1666280	36	MK415409	Phage YS1-2_2434, complete genome	13351-13386	3	0.917
NZ_CP046514_6	6.53|1666891|36|NZ_CP046514|CRT,CRISPRCasFinder	1666891-1666926	36	MK415409	Phage YS1-2_2434, complete genome	12820-12855	3	0.917
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3730-3766	3	0.919
NZ_CP046514_6	6.105|1666246|36|NZ_CP046514|PILER-CR	1666246-1666281	36	MK415409	Phage YS1-2_2434, complete genome	13351-13386	3	0.917
NZ_CP046514_6	6.114|1666892|36|NZ_CP046514|PILER-CR	1666892-1666927	36	MK415409	Phage YS1-2_2434, complete genome	12820-12855	3	0.917
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3730-3766	3	0.919
NZ_CP046514_6	6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder	1666532-1666566	35	MT498053	Streptomyces phage PHTowN, complete genome	22499-22533	6	0.829
NZ_CP046514_6	6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder	1666532-1666566	35	MT897908	Streptomyces phage ShakeNBake, complete genome	22517-22551	6	0.829
NZ_CP046514_6	6.109|1666533|35|NZ_CP046514|PILER-CR	1666533-1666567	35	MT498053	Streptomyces phage PHTowN, complete genome	22499-22533	6	0.829
NZ_CP046514_6	6.109|1666533|35|NZ_CP046514|PILER-CR	1666533-1666567	35	MT897908	Streptomyces phage ShakeNBake, complete genome	22517-22551	6	0.829
NZ_CP046514_6	6.10|1663791|35|NZ_CP046514|CRT,CRISPRCasFinder	1663791-1663825	35	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	68583-68617	7	0.8
NZ_CP046514_6	6.71|1663792|35|NZ_CP046514|PILER-CR	1663792-1663826	35	NC_009468	Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence	68583-68617	7	0.8
NZ_CP046514_3	3.1|337764|31|NZ_CP046514|PILER-CR	337764-337794	31	NZ_AP022338	Mameliella alba strain KU6B plasmid pKUB257, complete sequence	221651-221681	8	0.742
NZ_CP046514_6	6.40|1665959|35|NZ_CP046514|CRT,CRISPRCasFinder	1665959-1665993	35	NZ_CP029828	Burkholderia sp. JP2-270 plasmid p2, complete sequence	353530-353564	8	0.771
NZ_CP046514_6	6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder	1666532-1666566	35	MK305891	Streptomyces phage Gibson, complete genome	22692-22726	8	0.771
NZ_CP046514_6	6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder	1666532-1666566	35	MH019216	Streptomyces phage Wentworth, complete genome	24758-24792	8	0.771
NZ_CP046514_6	6.59|1667326|37|NZ_CP046514|CRT,CRISPRCasFinder	1667326-1667362	37	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	127101-127137	8	0.784
NZ_CP046514_6	6.101|1665960|35|NZ_CP046514|PILER-CR	1665960-1665994	35	NZ_CP029828	Burkholderia sp. JP2-270 plasmid p2, complete sequence	353530-353564	8	0.771
NZ_CP046514_6	6.109|1666533|35|NZ_CP046514|PILER-CR	1666533-1666567	35	MK305891	Streptomyces phage Gibson, complete genome	22692-22726	8	0.771
NZ_CP046514_6	6.109|1666533|35|NZ_CP046514|PILER-CR	1666533-1666567	35	MH019216	Streptomyces phage Wentworth, complete genome	24758-24792	8	0.771
NZ_CP046514_6	6.120|1667327|37|NZ_CP046514|PILER-CR	1667327-1667363	37	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	127101-127137	8	0.784
NZ_CP046514_3	3.1|337764|31|NZ_CP046514|PILER-CR	337764-337794	31	NZ_CP015038	Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence	166502-166532	9	0.71
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	653-689	9	0.757
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4718-4754	9	0.757
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	281-317	9	0.757
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3071-3107	9	0.757
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3661-3697	9	0.757
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_006997	Bifidobacterium longum plasmid pMG1, complete sequence	653-689	9	0.757
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_021875	Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence	4718-4754	9	0.757
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004769	Bifidobacterium longum RW041 plasmid PNAC2, complete sequence	281-317	9	0.757
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_010861	Bifidobacterium longum plasmid p6043B, complete sequence	3071-3107	9	0.757
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_017220	Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence	3661-3697	9	0.757
NZ_CP046514_6	6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder	1667181-1667217	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8153-8189	10	0.73
NZ_CP046514_6	6.118|1667182|37|NZ_CP046514|PILER-CR	1667182-1667218	37	NC_004252	Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence	8153-8189	10	0.73
NZ_CP046514_6	6.21|1664585|36|NZ_CP046514|CRT,CRISPRCasFinder	1664585-1664620	36	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	244725-244760	11	0.694
NZ_CP046514_6	6.82|1664586|36|NZ_CP046514|PILER-CR	1664586-1664621	36	CP046512	Bacillus cereus strain JHU plasmid p1, complete sequence	244725-244760	11	0.694

1. spacer 4.1|1257328|19|NZ_CP046514|CRISPRCasFinder matches to NZ_KP691636 (Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B1, complete sequence) position: , mismatch: 0, identity: 1.0

ggacatatccatgtggatg	CRISPR spacer
ggacatatccatgtggatg	Protospacer
*******************

2. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_015066 (Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

3. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NZ_KP691638 (Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

4. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NZ_KP691635 (Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

5. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NZ_KP691633 (Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

6. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_002635 (Bifidobacterium longum KJ plasmid pKJ36, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

7. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

8. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004443 (Bifidobacterium longum VMKB44 plasmid pB44, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

9. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004943 (Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

10. spacer 6.43|1666174|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_006843 (Bifidobacterium longum plasmid pTB6, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

11. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

12. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

13. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

14. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

15. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

16. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_015066 (Bifidobacterium longum subsp. infantis 157F plasmid p157F-NC2, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

17. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NZ_KP691638 (Bifidobacterium longum subsp. longum 72B plasmid p72B, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

18. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NZ_KP691635 (Bifidobacterium longum subsp. longum 1-6B plasmid p1-6B2, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

19. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NZ_KP691633 (Bifidobacterium longum subsp. longum 2-2B plasmid p2-2B, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

20. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_002635 (Bifidobacterium longum KJ plasmid pKJ36, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

21. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

22. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_004443 (Bifidobacterium longum VMKB44 plasmid pB44, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

23. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_004943 (Bifidobacterium longum NCC2705 plasmid pBLO1, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

24. spacer 6.104|1666175|35|NZ_CP046514|PILER-CR matches to NC_006843 (Bifidobacterium longum plasmid pTB6, complete sequence) position: , mismatch: 0, identity: 1.0

ttggcgacggtggccctgaggtcctcgcggctcgt	CRISPR spacer
ttggcgacggtggccctgaggtcctcgcggctcgt	Protospacer
***********************************

25. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

26. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

27. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

28. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

29. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 0, identity: 1.0

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcccca	Protospacer
*************************************

30. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

31. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

32. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

33. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

34. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

35. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

36. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

37. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

38. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

39. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

40. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

41. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

42. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

43. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

44. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

45. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

46. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

47. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

48. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

49. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

50. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

51. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

52. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

53. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 1, identity: 0.973

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtccccg	Protospacer
************************************.

54. spacer 6.46|1666389|36|NZ_CP046514|CRT,CRISPRCasFinder matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 2, identity: 0.944

ttagtgagctgtttggcgaaacagaaacaatgtgat	CRISPR spacer
ttagcgagctgtttggcgaaacagaaacaatatgat	Protospacer
****.**************************.****

55. spacer 6.55|1667036|37|NZ_CP046514|CRT,CRISPRCasFinder matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 2, identity: 0.946

cgcccgctcggctcgaaggatatgctcacgatcttgg	CRISPR spacer
cgtccgctcggctcgaaggacatgctcacgatcttgg	Protospacer
**.*****************.****************

56. spacer 6.107|1666390|36|NZ_CP046514|PILER-CR matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 2, identity: 0.944

ttagtgagctgtttggcgaaacagaaacaatgtgat	CRISPR spacer
ttagcgagctgtttggcgaaacagaaacaatatgat	Protospacer
****.**************************.****

57. spacer 6.116|1667037|37|NZ_CP046514|PILER-CR matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 2, identity: 0.946

cgcccgctcggctcgaaggatatgctcacgatcttgg	CRISPR spacer
cgtccgctcggctcgaaggacatgctcacgatcttgg	Protospacer
**.*****************.****************

58. spacer 6.44|1666245|36|NZ_CP046514|CRT,CRISPRCasFinder matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 3, identity: 0.917

ggggattgttcttgggttttgttctcttgggttttg	CRISPR spacer
gagtattgttcttgggttttgttctcttgggtattg	Protospacer
*.* **************************** ***

59. spacer 6.53|1666891|36|NZ_CP046514|CRT,CRISPRCasFinder matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 3, identity: 0.917

gatgttggtgcgcccggttccagtgcgcatatatat	CRISPR spacer
ggtggtggtgcgcccgcttccagtgcgcatatatat	Protospacer
*.** *********** *******************

60. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 3, identity: 0.919

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcgtcc	Protospacer
********************************* .* 

61. spacer 6.105|1666246|36|NZ_CP046514|PILER-CR matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 3, identity: 0.917

ggggattgttcttgggttttgttctcttgggttttg	CRISPR spacer
gagtattgttcttgggttttgttctcttgggtattg	Protospacer
*.* **************************** ***

62. spacer 6.114|1666892|36|NZ_CP046514|PILER-CR matches to MK415409 (Phage YS1-2_2434, complete genome) position: , mismatch: 3, identity: 0.917

gatgttggtgcgcccggttccagtgcgcatatatat	CRISPR spacer
ggtggtggtgcgcccgcttccagtgcgcatatatat	Protospacer
*.** *********** *******************

63. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 3, identity: 0.919

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctccctttttgtcgtcc	Protospacer
********************************* .* 

64. spacer 6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder matches to MT498053 (Streptomyces phage PHTowN, complete genome) position: , mismatch: 6, identity: 0.829

ctggacggcgagatcgtcaagctca-cgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggcaacca-	Protospacer
.***********.************ **.*.* ** 

65. spacer 6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder matches to MT897908 (Streptomyces phage ShakeNBake, complete genome) position: , mismatch: 6, identity: 0.829

ctggacggcgagatcgtcaagctca-cgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggcaacca-	Protospacer
.***********.************ **.*.* ** 

66. spacer 6.109|1666533|35|NZ_CP046514|PILER-CR matches to MT498053 (Streptomyces phage PHTowN, complete genome) position: , mismatch: 6, identity: 0.829

ctggacggcgagatcgtcaagctca-cgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggcaacca-	Protospacer
.***********.************ **.*.* ** 

67. spacer 6.109|1666533|35|NZ_CP046514|PILER-CR matches to MT897908 (Streptomyces phage ShakeNBake, complete genome) position: , mismatch: 6, identity: 0.829

ctggacggcgagatcgtcaagctca-cgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggcaacca-	Protospacer
.***********.************ **.*.* ** 

68. spacer 6.10|1663791|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 7, identity: 0.8

ctcaagtttggatattgttgcatggtgcaactgtt----	CRISPR spacer
ctcaagttcggatattgttgcctggcg----tgttccaa	Protospacer
********.************ ***.*    ****    

69. spacer 6.71|1663792|35|NZ_CP046514|PILER-CR matches to NC_009468 (Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequence) position: , mismatch: 7, identity: 0.8

ctcaagtttggatattgttgcatggtgcaactgtt----	CRISPR spacer
ctcaagttcggatattgttgcctggcg----tgttccaa	Protospacer
********.************ ***.*    ****    

70. spacer 3.1|337764|31|NZ_CP046514|PILER-CR matches to NZ_AP022338 (Mameliella alba strain KU6B plasmid pKUB257, complete sequence) position: , mismatch: 8, identity: 0.742

acgcggtcaggtccgtcgcatccgccatctg	CRISPR spacer
cacccatcaggaccgtggcatccgccatctc	Protospacer
   * .***** **** ************* 

71. spacer 6.40|1665959|35|NZ_CP046514|CRT,CRISPRCasFinder matches to NZ_CP029828 (Burkholderia sp. JP2-270 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.771

gtcccg--tcaggaggaggtcgacaagttgaaggccc	CRISPR spacer
--ccaggttgaggaggaggtcgacaagccgaaggctg	Protospacer
  ** *  * *****************..******. 

72. spacer 6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder matches to MK305891 (Streptomyces phage Gibson, complete genome) position: , mismatch: 8, identity: 0.771

ctggacggcgagatcgtcaagctcacgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggaaacca	Protospacer
.***********.************* . .***  

73. spacer 6.48|1666532|35|NZ_CP046514|CRT,CRISPRCasFinder matches to MH019216 (Streptomyces phage Wentworth, complete genome) position: , mismatch: 8, identity: 0.771

ctggacggcgagatcgtcaagctcacgacgaacat	CRISPR spacer
ctggacggcgaggtcgtcaagctgacgggagacca	Protospacer
************.********** ***. ..**  

74. spacer 6.59|1667326|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.784

gaccatggaaggcgcgctgggcaatcttgaggccgca	CRISPR spacer
ggccaaggaaggcgcgctcggcaatcttgacgagacc	Protospacer
*.*** ************ *********** *  .* 

75. spacer 6.101|1665960|35|NZ_CP046514|PILER-CR matches to NZ_CP029828 (Burkholderia sp. JP2-270 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.771

gtcccg--tcaggaggaggtcgacaagttgaaggccc	CRISPR spacer
--ccaggttgaggaggaggtcgacaagccgaaggctg	Protospacer
  ** *  * *****************..******. 

76. spacer 6.109|1666533|35|NZ_CP046514|PILER-CR matches to MK305891 (Streptomyces phage Gibson, complete genome) position: , mismatch: 8, identity: 0.771

ctggacggcgagatcgtcaagctcacgacgaacat	CRISPR spacer
ttggacggcgaggtcgtcaagctcaccggaaacca	Protospacer
.***********.************* . .***  

77. spacer 6.109|1666533|35|NZ_CP046514|PILER-CR matches to MH019216 (Streptomyces phage Wentworth, complete genome) position: , mismatch: 8, identity: 0.771

ctggacggcgagatcgtcaagctcacgacgaacat	CRISPR spacer
ctggacggcgaggtcgtcaagctgacgggagacca	Protospacer
************.********** ***. ..**  

78. spacer 6.120|1667327|37|NZ_CP046514|PILER-CR matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.784

gaccatggaaggcgcgctgggcaatcttgaggccgca	CRISPR spacer
ggccaaggaaggcgcgctcggcaatcttgacgagacc	Protospacer
*.*** ************ *********** *  .* 

79. spacer 3.1|337764|31|NZ_CP046514|PILER-CR matches to NZ_CP015038 (Burkholderia cenocepacia strain 895 plasmid pBcp895-1, complete sequence) position: , mismatch: 9, identity: 0.71

acgcggtcaggtccgtcgcatccgccatctg	CRISPR spacer
ggtcggtcaggtccgccgcatacgccgggtt	Protospacer
.  ************.***** ****.  * 

80. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

81. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

82. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

83. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

84. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctcccttcccctttttg	Protospacer
***************************... *.....

85. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_006997 (Bifidobacterium longum plasmid pMG1, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

86. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_021875 (Bifidobacterium kashiwanohense JCM 15439 plasmid pBBKW-1 DNA, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

87. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004769 (Bifidobacterium longum RW041 plasmid PNAC2, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

88. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_010861 (Bifidobacterium longum plasmid p6043B, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacgtccccggttcgctccctttttgtccccg	Protospacer
..  .  .****************************.

89. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_017220 (Bifidobacterium longum subsp. longum KACC 91563 plasmid BLNIAS_P1, complete sequence) position: , mismatch: 9, identity: 0.757

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ccctttttgtccccggttcgctcccttcccctttttg	Protospacer
***************************... *.....

90. spacer 6.57|1667181|37|NZ_CP046514|CRT,CRISPRCasFinder matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 10, identity: 0.73

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacatccccggttcgctccctttttgtccccg	Protospacer
..  .  ..***************************.

91. spacer 6.118|1667182|37|NZ_CP046514|PILER-CR matches to NC_004252 (Bifidobacterium longum DJO10A plasmid pDOJH10L, complete sequence) position: , mismatch: 10, identity: 0.73

ccctttttgtccccggttcgctccctttttgtcccca	CRISPR spacer
ttagcaacatccccggttcgctccctttttgtccccg	Protospacer
..  .  ..***************************.

92. spacer 6.21|1664585|36|NZ_CP046514|CRT,CRISPRCasFinder matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.694

gtcatgcactaataaggtgtatggccctactattat	CRISPR spacer
agaccatcctaataaggtgtatggcccttctttttt	Protospacer
.   ... ******************** ** ** *

93. spacer 6.82|1664586|36|NZ_CP046514|PILER-CR matches to CP046512 (Bacillus cereus strain JHU plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.694

gtcatgcactaataaggtgtatggccctactattat	CRISPR spacer
agaccatcctaataaggtgtatggcccttctttttt	Protospacer
.   ... ******************** ** ** *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	326407 : 351553	28	Bifidobacterium_phage(25.0%)	capsid,integrase,tail,holin,terminase,portal	attL 322948:322962|attR 354450:354464

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP046514|326407:351553|DBSCAN-SWA
GATGAACACGAGGATTGACGGGGCGAGCTGCCAGATCATCCCCGACGATTTGTACACCAGCGGAGAGCCGAGCCTCAACAGGCTCGCCGCAGCGGCGGGCGACCGGTTCGACGTCTGGCAGCGGCAGATCAACCGGATCATCCTCGCGAAAAGCGCCGACGGCTTCTGGAGCGCCCGCAACACGGTGCTGTCGATCCCGCGCCAGACCGGCAAGACCTACGACATCGGCTGGATCGCGATCCACCGCGCCGCCCGAACCCCCGGCATGCGCATCGTGTGGACGGCCCAGCACTTCAGCGTCATCAAGGACACGTTCGAAAGCCTGTGCGCGATCGTCCTGCGCCCGGAAATGAGCGGTCTCGTTGACCCCGACCACGGCATATCCCTGGCCGCCGGCAAGGAGGAGATACGCTTCCGCAACGGGTCGCGCATCTTCTTCCGCGCGCGAGAACGAGGCGCATTGCGAGGCGTCAAGAAGATCGCCCTGCTCGTCATCGACGAGGCCCAGCACCTGTCCGACTCGGCGATGGCGTCGATGCTGCCGACCCAGAACCGCGCCTGGAACCCCCAGACCATCTACATGGGCACCCCGCCCGGGCCAAGGGACAACGGCGAAGCGTTCACCCGCCTCAGGGACAAAGCGCGCGCCGGCCGCACCCACAGCACCCTCTACGTCGAATTCACCGCAGACCGCGACGCCGACCCCCTCGACCGCGACCAATGGAGGAAAGCCAACCCCAGCTACCCGTCCCACACCAGCGACGAATCCATCGCCAACCTGTGGGAAAACCTCACCGGCGACGACTTCCGGCGCGAAGCCCTCGGCATCTGGGACGAACACGCCCTCAGCCAAGCCATCGACCGCCGCCAATGGGAGGAAGCCACCATCGAGCGCCGCCGCCCCGGCGGCGTCATGAGCTTCGGCATCGACATGAACCCCCAACGCACACGCCTGACCATCGGCGCATGCATGCGATACGACGACAACACCGCCCACATCGAACTCGCCGAATACAGGGACACCAACCACGACGGCACCATGTGGGCCGTCAACCTCATCGACAAGGTCTGGGAACAAACCGCCGCGCTCGTCATCGACGGGCAAAGCCCCGCCACCGCGCTCCTGCCCGACCTCGCCCAGGCCGGCGTCACCGTCACCGTCACCGCCGCCACCGACATGGGCCGCGCCTGCGGACGCCTCCAGGACATGCTCAGAGACGGCACCCTCACCCACCTGCCCGAAGACGGCCAACAACCACTCTGGCAAGCCGCCGCCAAAGCCACCACACGCCCCATCGGCAAAAACGGCCTCTTCGGATGGAACCGACCCGACGACGACACCGACATCAGCCCACTCAACGCCGTCACCCTCGCCCTCCACGGGGCCATGACCACCAGAAGAGACCCCACCCAAGAAACGGAGACATGGTTCTAATGCCCGCCACCGACCACAACGGCCTCGCCATCACCAACCCCGCCACCCAAGACGCCTACCTCGCCGTCCAATCCGCCAACATCACCCGCATCAAAGGCGTCGAAGACGACGACATGCCCACCATCCAAAAACTCCTCACAACATGGCGCGACCACTACGCACGCAACATGCTGAGAGCCGAATACTACCAAGCCCGATACCGATACAACGGCGTCGCCTACAGCATCCCCAAACAAATGCGCGCCCTCGCCAAACCGATGATCGGATGGCCCAACAAAGCAGTCCGAGCGCTCGCCGACCTCAACGTGTTCGAGGGCTTCGACGCGCCCGACCCGCTGCAGGCGCAGGTGGACGAACTCGTGGACGACAACGCATGGGACACCGACGTCTCCGAGGCGATCACCAGCGCCTACATCCACGGATGCAGCTTCATCACCGTGTACGAAGACCCCGACGAACCCGGCCGCATCCTCATGCTGCCCCGCTCGGCCGACTGGAGTGCGGGCATCTGGGACCGCCGACGCCGCCGCCTCGGCTCGGCCTTGACCATCACCGACAAGGACGACAGAACCGGGCGCATCACCGCGTTCACCGCATGGCTGCCCGGCAAGGTCTACGAAATCGACGACAGCGAAGGCCAGTGGACGGCGCGGACGATCGAAACCCACCTCGACCGGCCAAGCGTCGTGCCCCTCGTCAACGACGCCCAGTCCTACCATCCGCTGGGCAACAGCCGCATCACCCGCACGCTCATGAACCTGACCGACTTCGGCCTGCGAACCATGGTGCGCATGGAGGCCACCGCCGAATTCTATGCAGCCCCCCGCGTGTGGTTCATCGGAGCGTCGAAGAAGTTCACCGACGACACATGGAGCAGCATCGTGAGCGTCATGAACGGCATGCCCGCCAACAAGAACGGCGACAAGCCCACCATGCAGCAGCTCCAGCAGGCATCCATGACCCCGCACGCCGACATGCTGCGCACCATCGCCCTCATGGTCAGCTCGGAAACCGACATCCCCGTCAACGACCTCGGCATCACGATGGACAACCCCGCCTCAGCCGAGGCGATGGCCGAAGCCGAACGCAAACTGTCCCGCACCGCCGACCGGCAAAACAAGCGCTTCGGCCGCGCGTTGAAGGAAGCCATGAGCATCGCACTGGCCTATCAGGGCGCAGACCCCGACGCATTGCGCGAACTGCGCCCCATCTGGGCACCGGTCAAGGAAACCAGCGACGCCGCCCGCGCAGACTGGTACCAGAAGGTCGCATCCACCAACCCCGACTTCGCCGACAGCGACGTGGGACTCACCCGCGCCGGCCTGACATTGGACGAGATCAAAGCCCACCGGGCCTACGAGAAGCAGAAACGCACCGAAGCGGCCGTGGACACGCTACGCGCCCGCCTGCACGCCGCCGATCAGACCGCCACCGGAACGGAGGCCGAGAATGGACAGCAACAGCCTGCCGCCGAGCAACCTCAGCCCGGCGCAGCGTAAAGCGTTCAACAGCCACCTCAACGACCTGTGGGACGACTACCAGGACGAACTGTCCGACCTCATCATCGAGGCCAAGACGATGGTGCCCAACAGCCTCTACTTCGGCGATGATCCCACCGGCCAAGCCCGCCTACAACTGGAAGACTACGCGCGCAAGGCCAACCTCATCGTACAGGACTACTACAGGAACGTGCGAGCCGCATGGGCCGAAGCCGCCGGCATCACCATGCCCGATTACAAGGAGGCGCAGGTCAGCTCAGACCGCGCCTTCTGGCAGATCGTCGGCGGCTACAACAACACCATGCACGTCGGCGCGAAATTCACCGACGTCATCAACGGACGAAGCAAAGCCGGCCTGACCATGGATCACCTCTGGGCCGTCAACACGCAAGGCTACACCGAAGACGACTGGGCGCGCCTCGCCAAGGACATCATCAACGAGACCGCACGCCTCACCGGACGCTTCACCGCCCAAAACGACCCCACCCGCCCCAAATACGCGCGAGTCCCCCAAGGAAAGACCTGCGCGTTCTGCGCCATGCTCGCATCCCGAGGCTTCGTCTATGCCAGCGAGGACACCGCCGGCAAATGGAACAGATACCACCACGACTGCGACTGCAAGATCGTCCCCTCATGGGGAGAGACCAAACTCGAAGGCTACGACCCCGACAAGTTCAAGCGCATGTACAAGGCCGCGAAATCACGAGCTGGCACTTCGGAAACCAATGCCGTAATGAAGACCATGAACCACATGTTTCCCGACGAGCTCACCTCTGGGGTGTTCGAACTATCGGCCGAATGGCCCGCCGAGGTCATCCAGCCACGGGCGAAAACATGGGATCATGTCTTCGAGAACCACGGTCCCGACGCGACAGTACCCGGCAAGACCCATTTTCCGAAGGAATGGGACGAGAAGAAAATCAAGTGGGCTGTAGAGGAGACCGTCGTGGCTCCCGACCTCGTCATACCGGCTGGCAGGGAACGTCAAACCCTGTATAAGATAGTGGAAGACGAGATCGTCCGCGTGTGGCTCCAGAAAACCAGAAACACCGGCGGTCGATTCACCGTCCACACGGCACACCCAGTCGTGCCGCAGCAAAAGGAGAAGCTATGGCAACAGATTCGCAATGCGAAGCCGCATACCGGCGGCTGAGGCCATACTGCGACGTCCTTGAGGAAGCCGAGGAACTGGATTACGGCCTAGCCGCCGGCGAACAGTACTACGCCCTGAGCTGGCTCATCGCCGCGATCCTCGAAAACCACGTAACCGTGCCGCAAGAACCCCTGCTCGACGCCTTCGGACTGCTCGAAGATGAAGACAAGGACGAATACGCCTCGGCCCTCGACAAAGAACTGGCCCAGCCGACATAGCTCCGGCCCATTCAAGCCACCCTCGCCGGGTGGCTTTTTCAATGCCCGAAGACGGGCATCCAAGTTTTCAGCCACCCGCACGGGTGGCTTTTTCAATGCCCGGAAAGGGCTCAACCACAAGGAGAACAACCATGTTCCTCAACCACACACCCCGTCACGTCCGATTCGTCGCGGCCCCGCCGGAAGGCGGCATGGCTTCCGGCGGGGCCGACCAGCCAGCCGCGTCTTCCGAATCCGAGGATGTCGGCGAACCGATCGACTGGGAAGCCAAATACAAGGAAGCCCTCGGACACTCGCGCGACTGGGAAAAGAAAGCGAAGGCCAACAAGGCCGCCGCCGACGAGCTGGAAAAGCTCAAGGAAGCGAGCATGACCGAACAGGAAAAGGCCGCCAAACACGTCAAGGAACTCGAAGACAAGGTCGCCTCCTACGAAACCGCCAAGCAGCGGGCCGAGTGGAAGGCGCAGGCGTCGGCCGAGACCGGCGTACCCGCCGACGTGATCGAAGGCGACAGCCTCGAAGCCATGCAATCGCACGCCAAGCGCATCCACGAGCTGCTCAACCCCAAACCCAAGGCCCCGGCCGTGCACGGCGCGGACCGCCAGCCGTCCGGCAAAGGCCCGAACGAGAGCATGGTCAACTACCTGCGCAACCTCGGCCTCTAACCGGCCAACATCTCCTCACCCCTCATCTGAAAGGAAACCATCATCATGGCACTCGACACCAGCAAGGTGCTGCTCCCCAAGGAAGTAGCCACCGTCATCACCAAGCGCGCCAAGGACACCAGCACCATCGCCGCGCTCTCCCCGAGCGAACCCCAGCTCTTCCTCGACAAGGACTACATGGTCTTCACCGGCAATTCCGAAGCCGAGGTCGTCGCCGAAGGCGCACAGAAGTCCAGCTACGAGGAAACCCTCACCCCGGTCGTCGGCAAACGCTTCAAGGTGCAGACCACCACCCGCGTCAGCAACGAGCTCCAGTGGGCCGATGAAGACGCCAAACTGGAGATCACCAGCAAGATTCTGGCAGACCAGGCCGCCGCAATGGGCCGCGTCCTCGACTACGTCATCTACCACGCCTTCGACCCCAAGAAGAAGACGACCCTCGACGGCTTCAACGCGCTCGCCAAAACCGCGGTCGGCGTGACGGCCACCGACGACCGCGTCGCCGACATCGACAGCCTCGCCGAGGCCGTCAGCGACGAGTACGACATCAACGGCATCGCCATGTCCAAGACCATGGCGAACGAGCTGCGCAAGATTCGCGTTCCCTCCACCGGCCAGCGCTTCTACCCGGAAATCCCGATCAACCTCCAGGTCGGCAACCTCGACGGCATCCCCGCCGCCACGTCCGGCACGGTCAACGGCCGCCTCATCACCCCTGCGACCGGCATCCTCGCCTTCCTCGGCGACTTCCGCCTCATCCGCTGGGGCATGGTGCGCGACATCTGGAGCGAGATCATCGAATACGGCGACCCCGACAACACCGGCAAGGACCTCAAGGGCGTCAACCAGATCGCCTACCGCACCGAGGCCATGTACAGCTACGCGATCCTCGACCCCAAGGGCATCGCCGTGCTCAAGAAGCCGACCTCCACCGGCAGGGCGGCCAAGTGATGGCCGCGCCCCTCACCCAGACGCTCGTAGTGCAGAAAACCGACGAGGCCGACGAGGCCGGCCTCGCCATCCCTGTGCGTCTGGTCAAGCCCGACGGCACCCCGTTCGCCGAAGGCGTCGCCACCGTCTCATGGGACTCGATCACCGGCAAGCCCGCGACCTTCACCCCGCCCGCGCCGACCGCCAGCGCGCGCGGCGGCGTGCTCCAGCAGGCGGCCGAAGCGCAGCTCGCCGCATCCGCCGACTCGGCGGCCATCATCGCGAAGGTCAACGCCACGCTGACCAAGCTCAAGGCCGCCGGCATCCTCACCTAAGGAGACCCCGCATGGACGGATACCCCAGCACCCCGCTCAACCTGTCCGACGGCACAACCATGACGCAAGACGGCGGGGGAGAGGACGAAACGGACGACGAGAAGCCGTTCGCGCAGGTCGGCGACCTCGAAGCCCGATGGCACGCGCTCACCGGCGACGAACGAACCAGCGCCGAAGCGCTGCTCGCGGACGCATCCGACCTGATCCGCACCACCTGCCCGCGCTGGCACACCGCCAAACCCGCCACATTGAAACGCATCGCCTGCATGGCCGTCAAACGAGCCATGCAGGCCGGCCCCGACATGTCGGGCGTCACCCAATCCACCCAGACCGCCGGCAGCTACAGCGAAAGCCTGAGCTACGCCAACCCCGCCGGCGACCTCTACCTCACCACGAGCGAGAAGGAAGCCTTGGGCGGCGACGGCGAGGCATGGGCCTACGACATGGCCGGAGGCGCGGCATGAGAGGCGAGACCATCACCCTCATCCACCGCACCAAAACAGGCGAAGACCCCGGCGGCGGCATCATCTGGAACACCCGCGAGGAACAGGTGGACGACGTGCTCATCCAGGACGGCAGCCAGTCGAACTCCACCGACCCCATCCGCCCCGACGGCATCCGCACCGCCAAAACCATCCACATGCCCCGCGCATGGCCCTACCGGAGCCTGCGCGGTGCCAAGGCGAGAATCGACGGCGTCGAATACACCGTGATCGGAGACCCCCGCCCCTACACGGGCGGCATCACCCCGACCCGATGGAACCTCACCGTCGAACTCGCCGACACCAGAGGCTAGGAGAGCAACGCATGGCAAAGGTAAAACTCAACCTCGCCGGCTTCCGCGCGGTACGCCAATCCGCACCCATCCAGCATGCCATCGACCAACAGGCCGCGCTCATCGCCGCCCGTGCCAACAGCATGGCACAGGTCGAAGGCGCGACCTACGAGGCCGCAACCCATGTCAGCACCCCCAAAGGCAGCGTCGCGCTCGCCACGACCGGGCACGGCTCCGAAGGCAACGTGAAGGCGATGGTGGACAACGCGAAACACAACACGCTGCTCAAGTCGGTGAAACAACAGTGAGCCTCAACCTCGAAAAAACAGTCAAGGACTGGATCGACGCCGACCCCGACGGCGACGGCCTGACCGCCTACCTCGAAGTGCCCGCAGACCGGCCCCAACGGTTCGTGACCATCGAACGGGTAGGAGGCCGGGAACTCGAATACAGCAGCCATCCCACCATCGCCATACAGGTATGGGCGGAAAGCCGATGGCAGGCCGCCCAGCTCGCCACGAGCCAGGTGCTGCCCCGACTGCTCGACCTCGACCTGCTCGACCCCATCGCCGCCGTCGGCGTGGAAAGCGTCATCGACTTGCCTGACCCCGGCCCGCCGCCCCAGCCCCGATACCAGATCACCATAAGCCTCGACGCCGCCGCTCAATAAGACGACGCCGCACCATCCGAAAGGCACCATCATGGCCGAAACCAACCACAACAACAAGAAAAACGTCAGCCTCGGCAAGCCCAAGAAGACCGGCTGCCTCTACTACGCGCCCGCAGGAACCGCCCTGCCGACCGACGCCACCACCGCCCTGCCTGCCGCATACACCTGCGTCGGCTACCTGTCGGAGGACGGCGTCACCAACGCCACCGACACCGACACCACCGACATCAACGAGATGGGCGGCATCAAGGTGCTGTCCGAGATCAGCGGCTACGGCGAGACGTGGCAGTTCAACATGATCGAAACCAACGAAGCCAGCCTCAAACTGCGTTTCGGCACCGCGAACGTCACCGGCACAGCGGACAAGCTCACCGTCTACCACGCCATCCCGTCCGGCGAAAGCCTCGTGCTCGTGTTCGAGATCGCCATGACCGGCAACCGAGTCAAGCGCATCGTCGTCGCCGACGGCACCATCACCGAATTCGACGACACCACCTACAGCGCCGGCGACGCCATCGGCTACGGCGTGACCATGAGCGCCAACCCGAGCGACCTCATCAACGGAGCCACCAGCGTCGAATACATCGCCAACGTCGCCGCCGCCTCGCTCAGCAAGTGATCCCACCCCGCGCCCGCCGTCCGGCGGGCGCACCCCCTCTGAAAGGACACGCATATGGCAGCCAAGCAGCCGCAGGACCACAAGACACCGAAAAACCAGCCCAGGACCGTCGAGGCCATGGGCGTCACCCTCGCCGTCAGCCCCGCGATCTTCGACGACCTCGACATGGTCGAATACCTCTACGACCTCCAAGCCGCGCAGGAAGGCGATGGCACCGGCGCGTTCGCCATCGTCCCCTTCCTCAAGAAGCTCTGCGGCCCCCAGTACGCGGCCATGAAGGACGCATTGCGCGACCCCGACACCGGGCGCGTGAGCATCGACAAGGTCAGCGAATTCATCGCCCAGCTCCTCGAACAGGTCGCCCCAAACTCCTGACGCTCATAGGAATGCTCGCCACGGCACCCGACGCGCTCGAAGCGGACTTCCAGCGTTTCTATGGGCTTAACCTCGACCTCATATGGACGGGCGAACTGCCCGCCAACCGGGCGGCCGCACTGGCCGCCAACCTCCCCCGCCAGTCCATCATCTGGCAAAAACTCAACCCGCGCCTCGCATGGGACGACCAAACCTACCTCCTCGCCGACATCCGCGACAGCCTCGCGTTCCTCGCCTGGACGAAAACCAAGGAAGCCTCACGCAAGGGCGCGCGCTGGCGCGGACAACTCCAACGCCCCGGCACCGTCCGGCATGAAGCCACGGGCGGCGAGGTCATGGCGATGGACGACGAACAACTAGCCGCATACCTGGCCGCACCGCGCACCACCATCAGGGAGGCATAGCATGGCAATCGAGATCGCCACCGCGTTCGTGCAGGTCGTGCCCAGCATGAAGGGCGTCGGCAAGGCCATCGAATCGGCGTTCGGCAGCGCATCGGAAACCGCCGGCAACACCGCCGGCATCAAAGCCGGCAACGGCTTCGCCGGCGGCTTCGGCGCGAAACTCGGCGTCATTACCGGCATCGCGCAAAGCGTCGCGGGCAAGGCCATCGAAGCGTTCATGGGCCTGTCCGGCGAGATCACCAGCGCCTCCGACAGCGCCCAGAAGTTCGCCAGCACCCTGAACTTCGCCGGCGTCAGCGAACAGCAGATCAAACGACTCACCGCCAGCACGCAGGACTACGCCGACAAGACCGTCTACGACCTCAACGACATCCGCAACACCACCGCCCAATTGGCCGCCAACGGCGTGCCCAACTACGACCGGCTCGCCGAAGCCGCAGGCAACCTCAACGCCGTCGCCGGAGGCTCCGCCGACACCTTCAAGTCCGTGGCGATGGTGCTGACGCAGACCGCCGGCCAGGGGAAACTCACGACCGAGAACTGGAACCAGCTCTCTGACGCGATCCCCGGCGCGAGCGGCAAAATCCAACAGGCACTCAAGGAGGCCGGAGCCTACACCGGCAACTTCCGCGACGCGATGGCCGACGGGCAGATCACCGCGCAGGAATTCAACGACGCGATCATGTCGCTCGGCTTCACCGACGCCGCCGTGGAAGCCGCCACATCCGCCAGCACCATCGAGGGAGCCACCGGCAACCTCGAAGCCGCGTTCGTCAAGCTCGGCGCGAGCGTGCTCGACAGCGTCAAACCCGCCATCACCGGCGGCATGAGCTGGATCGCAGACGGAGTCACCAACGCCGTGCCCGTCGTCCAGGCAGGCATCGAAGGGCTCATCGGCTGGTTCCAGCGCCTCTACTCCAAACTGGAGGAAAACGGCGCGATCACCGCGTTCAAATCCGCGTGGGACACCATTCGGGACGCGATCATGGGCGTCGTCAACATGGTCATCGACTGGGTGAAACTCATGCCGCCCGACGGGGTCGCGACCGCCATAAAACTCATCGCCGACACGTTGAACCTCATCGTCGGCAACGCCGGCAAGCTCGCGCCCGTGCTCATACCGGCCGTCGCCGCGTTCCTCGGCTTCAAAACGGCCACGGCGGGCATCACGGCGGTCGCCGGCGGGCTCGACGGCATCTTCAACGCCGCCGTGAAGGTCAAGAACGCCGCCAACGGCGTCACCGACCTCGTCAACGGCATAGGCGGCATCTCCGGCCGCATCCAGAAGATAGCCGCATCCACCAAGATCGCGCAGAACGCGCAACTCGCATGGAACGCCGTGACGAGCGCCGGCACCGCCATCCAACGGGCCTTCAACGCCGTCCTCAAGGCGAATCCCGTCGGATTCTGGGTCACGATCTTCGCCACGGTGGTCGCCGCGCTCGTCTGGTTCTTCACCCAGACCGAGGTCGGCCGCAAGGCGTGGGCCGCGTTCACCTCATGGCTGTCCGAGACATGGGCCGCGCTCGTGGAGGGCGCTAAGGCGATATGGAACGGGCTCGGCGAATTCCTCGCCGACCTATGGGCGACGATCACAGGCGGCGTGCAATCCGCATGGGACGGCATCGCCGGCTTCTTCACGGGCCTATGGCAGACGATCAGCGGCGGCGTCACCGGCGCATGGACGTCGATCACCACGTTCCTGTCCGGCGTGTGGACCGGCATCAGCACGACCGCCACGACGATTTTCACCGGGATACGAGACTTCATCGTCAACGTGTTCACCGTCATCGGCGCGCTCATCGTCGCCCCGTTGCAGGCGATCCAGAACGGCATCAACACCGTGTTCGGCTGGATACTCTCGTTCATCACCCAGCAGATGAACAGCACGAACACCGTATGGAGCACCGTATGGACGGCGATCTACAACGTCGTCAACACGATCTTCACGCTGATAAGCGGCTACATCTCGACCGTGGTGAACGCGATCCGCACCGTCATCGTCGTGTTCCTCGACCTGCTCAAGGGAGACTGGCAGGGCGCATGGGACGCGATCAAATCGTTCTTCACGACCACATGGGACGGCATCAAAGCGTTCCTGTCGAACATCCTCGACGGAATCAAAAGCATCTGGACGAGCGTATGGACGGCCGTAAGCCAGTTCTTCACGGATGTCTGGAACAGGATCGTCGCGTTCTTCACGCCGATCATCAACGGCATCAGGAACACGATCGGCAACGTCCTCAACGCCATCAGCGGCGTATGGACGAGCGTCTGGAACGCGGTCAGGTCCGTCGCATCCGCCATCTGGAACGCGATCAGCGGCGTGGTGTCCACATGCATCCAGAATGTGCGCAACACCATCTCGACCGTCCTGAACGCCATCAGCGGCGTATGGACGAGCGTATGGAACAGCGTCAGCTCGTTCCTGGGAAACATCTGGCACGGGATCACGTCGGCCGTGTCCAACGGCATCCAATCCGTGTCGAACACCGTCGGCCGCATCCGCGACACCGTGCTCGGCGCGGTCAGCGGGGCCGGCGGATGGCTGTACGACACGGGCCGTCAGGTCATCCAAGGCCTCATCAACGGCATCGGCGGCGCGTTCCAGTGGGTCAGGAACACGATCAGCAACCTCGGCAGCAGCCTCGTCGGCTGGGCCAAGAGCGTGCTCGGCATCCACTCGCCATCGAGAATCTTCCGCGACGAGGTCGGCAAATGGATACCCGCCGGCATGGCCCAGGGCATCGACAAGGCCAGCGGCCTCGTCGCCGACAGCATCGACGGGCTCACCGACATGGTCCCGACCGTCAGCCTGAAGACCGACACCAGCCGACTCGAAACCCCGCTCGCATACCACGGCACCGTCAACGGCGGCCGGATGGCCTATACGATCGACGACAGCCAAGGCGGGTACGCGACCAAACAGGACATCATCGACGCGATCGACGCGGCCCTCGCCGCCGGCATCACGCTCAACCTGTCCGATCGCGGCGGCGAGGTCATGGCCGGCAAGCTCGCCAAACCCATGAGCTACGAACTCAACAGCCTCGCCATGAGAGGCCGTTAAAACCAGAGAGGAAAGCATCATGCTCTACCAGCGACGCATGCGCCTGCCGCATGTCGAAGACCCCACGCTCAACGGCGTCCCGCTGGAACGCATGATGCTCTCCCTATCCTCCGATGGCGTGACCATCGACGCCGCCAAACCGACCTTGAGCATGCAGGACATGCCCGGCCGCGACGGCCGGCTCGACCTGACCCTCACCGACCCGACCGGGGCCGCGTGCATGGGCGACCGCGCCATCACGCTCAGCCTGTACGCGATCGGCGGCGAAGACGACATCCTCACCGCCAAAACCCGGCTCGCCGCCCTAGCCGGCACCATCGTCTCACTCTCATGGCGCAGCCTGCCCGGCGAATACAAGGGTCGCATGAGCCTCGGCGCATGGGCGGACAAATGGGCCGGCGGCCACCAGATCGGCACGCTAGTGCAAGCCGAGATCGACGCCCGCCCCTACCTGATCGGCCGCAGCCGATCCATCGCGCTCAAAACGGGCATGAACACGATCCACGTCAAAGGCAACCGGCCATGCTGGCCCACATGGACGCTCACCCCCGCCAGCGGGGCGAAAACCGTCAGCATCAAGGACGCGCACGGCCACAAACTCGCCATCGCGTCCACCACCGCCATCACCGGCCGCATCTCCATCGACACCGACCCCGACAAACGCGAGCTGCGCGTCAACGGCAACCTCATGGCCCCAACCCTCGAATCCGACTACTTCCCCCTATTGCCCGGCCCGAACACGCCCACCCTCACCGGCTGCACCGGCACCCTCACCTACCGGCCACTCACCCTCATCTAGGAGACACGACCATGCGCTACATGATCTTCGACCGCTGGGGCAACCCGCTCGGCGACCTGCCCTATGTCATCAAGGCTCTCCGCACCAGAGCCACCGACGGCACCGACACACTTGATATCACCACCATCGGCGAGATCAACAAGGACGAACGCATCGTGTTCCAGGACTCGATGGGCCGCTGGGCGGAATACCTGTGCCAGTCCACCCAGACCGCCCGCGCCGCAGGCATGCCCGTCACCGTCGCCTACTGCGCCGGCAGCATCGCGGAACTCTCGCGCACCTATATCGAGGACAAACGCAACCGCAACGCGAACGCCAAAGCCTGCCTCGCCAAGGCATTGGAAGGCACCCGGTGGACGGTCGGCACCGTCGAGACCGGCACCATCACCGGCATGGCCAACCTCGCCTTCTACCACTGCACCGTCCTCGAAGCCGCCCAGAAGACCGCCGACACTTACGGGCTCGAAGTCCAGACCGAATACCAGCCCGACCCGACCGGCAACCAGATCGGCCGGCGCATCATCCACCTCGTCGAACACCGGGGCTCCGCCAACACCACGAAACGCTTCGAATACGGCAAAGACCTCACCCAGATCAAACGCGACATCGACAGCGGCGACGTCATCACCCGCCTCTACGGCTGGGGCAAAGGCATCGAACAGACCAACGACCAAGGCGAGGCCACCGGCGGATACAGCCGCAAAATCAGCTTCGCCGACGTCAACAACGGCAAACCCTACGTCCAAGACGACCAAGCGCTCGCCGACTGGGGCATCGTGGGAGCCGATGGCACCAGACACCACAGCGAAGCAAGCGTGGACTTCCCCGACTGCGAAGACCCCAAGGAACTCCTCGCCCTCACCAAGAACGCGCTCAAAACCCGCACCACGCCCGTCGTCTCCTACACGGCCGACGTGACCGCCCTCGGCCAAGCCGGCCTCAGCGCGGAAGGCACGGACGTCGGCGACAGCGTGCAGATCATCGACACCAGCTTCACCAATCCCCTCCGCCTCGAAGGCCGCATCCTCCAGATCGAGGAAGACCTGGCCGGCAGCCTCGCCGACACCAAGATCACCCTCGGCAACATCCGGCAATCCTACACGCAGCGCCTCGCCGCCCAACAGCAGGCACTCGACAAACTCGTCTCCAACTCCGGCGCATGGAACAGCGCCGCCGGCGGCACCGGCCCGTACATGAAGGACCTCATCGACCGCATCAACCAGATCATGAACGCCACCGGCGGATACACGTACCTCAAACCCGGCCAAGGCATCTACGTGTACGACAAGCCCGAAGACCAGAACCCCACCCAATGCATCCACATCGGCGGCGGCTACTGGCGCATCGCCGACCACAAGAACGCAAACGGAAACTGGGACTTCCGGGCGCTCGCCAACGGCAAGGGCATCTTCGCCGACACCATCTTCACCGGCCGACTCTCCGACGCCGCAGGCCTCAATTTTTGGGATATGGACACCGGCGAATTCAGCCTGTCCGCCCGCAGCACCGTGGGCGGCAAGACCGTGCAGGAATACGCCGACGGCGCGCTCTCCGACGCGAACTCGTACACCGACGCGGCCAAGCAGGCGGCGATCACCGAGGCCAAGCGTCAGGCCGACGCGGCCGACACGGCCAAGCTCGCCGAAGCGAAGAAGTACGCCGAGGCCAAGGCCGGCGAGGCCGAAACGGCCGCCAAGGCGCAGTCCAAGGCCGACGGCGAGGCCGCGAAGGCGGCGGCGCAGGCCTACGTGGACGCCCTGGACGAATCATTGGGCCAACGCAGCATCTTCGACCGGCTCACGAACAACGGCAAGACGCAGGGCATCTACCTGTCCGGCGGACTGCTCTACCTCAACGCCACGTACATGAAGACCGGCGTATTGGATGCGGCGCTCGTCAAGGCCGGCCGTCTCACCGACAAAAAGGGTTTGAACTATTGGGATATGGACACCGGCGAATTCAGCCTGTCCGCCAATTCGACCATCAACGGCAACAAGGCATCCGGCCTCGCCACCCAGACCCAAGCCCAGAAACTCGCCACGGACGCGCAGACCGCCGCCAAAGCCTACGCCGACCGCGTGGGTGCCAGCACGCTCAGCAGCGCGAAAAGCGACGCGACCGCCAAGGCCAACACGGCACTGTCCGGCGCGAAGACCTACGTCGAGGCGATCATGGCCTACGGCAGCAACCTCGTGCGCAACCCGAACGGCAACCCCGACCACGACCTCGACAAGCTCGGCGCGAGCAAACTCACCAAGACAATGCCCGCCACACACCCCGAGGGCATCACGAGCGCGATCCACCTGGGCAACGTGCGAGACACGTACTTCGGATGGCCGCTCGACACGTTCCGGGGCCACACGTTCCGCCTGTCCGGCTGGGCATACCGCAAGGCCGGCAATGTCACCAGCAGCTTCGGCATCCACTGGACGGACACCGGCAACGGCAACCACTGGCAGACCATCGCCCAATCCGCCGCCAACGCGAACGGCTGGACATACGTGTCCGGCAGCTACGCCGTGCCATCCAACGCCAAAACCGCACGCCTGTGGATGCAGGTCGATCGCAACACCGCCACCGCATCCGACGCCGACTGGTACTGGACCGGCCTGCAATGCACCGACGAGACCGCCGCCCGCAGCTACGTGGACACCTTCGAAGGGGAACTGACCCAGACCTACATCTTCAACAAGCTCACCAACAACGGCCAAAAACAAGGCCTCTACCTGTCCAACGGCCTGCTGTACATCAACGCCACCTATATGAAGACCGGCGTCATCACCGGCAAACGCTCCTACTGGAACCTCGACACCGGCCAGTTCGTCATGACCGACGCCAACGGCAACGAAACCGTCCACCTCGACGGGGACGGTGCCGACAACCTCCTGACCGGCACCTTCCGAACCGCCCGAACCGGCAACAGGGTGCAAATCAGCCCGAGTTTCAAACAGACCGAAATCTCCGGCACGGACTCCTTAGAAGGCGCAGGCATCCAGTTCTACCACGGAAGCGGCTCGTACCAGCACCCGTACATCGCGGTCGAGTCCACCACGCAGCAGGAGGGCGAAGTCAGCGCGCTCACGTTCAACGGCGGCCGCCGCGCGGAGCACGACCCCGGCGCGTTCGCCAGAATCGGCGAACGCAAGGCCGACGACAACACCACCAAGGTCGGCACCGTGTTTCTCGCCGCAGAAAAGGACTATGACTCGACCGATCCCAGCAGTAGGCGTGCCTACCTAAGTCTGTGGTCTCCCAAGACCGGGGACACGACCGCCACGCTCGCAGCGCGAGACCCCAATGGCCTGGTCGGAATCCAAGCCGACATCGACAGCGGATACCTGTACATGGGAGGCTTCCTCGGCGGCTTCTCCGGCGGGCGCTCCACCTTCCAAACCGCGTGGTGGGAAGGCCAAAACATCGGAGCCATGAAATACACGCAATACACCCTCACATCCTCCAATCCCGCGAAATACGGCTCATACAAGGCGTTCGCCACCGTCGACCACCGGCAGGACGATCCCGGTCTGTTCATAGCCACCGTGTCCGACTGCACGGCAAGCGGCTGGAGTATCTGGGTGTACACGCCGCCGGAGAGGGTGGTCACCAATATGGATGCCAGTTGGAACCGCAACACCAGCACCGGCGTCGTCTCCAACCTATCCATCAACACGCATTATGCGGCCCTGTTCCAAGGCAACAAACCCTACCAGCTCCACACCATCGGATTCCTCAAGAAATAGGAGATGCCCATGCAAGTCACCACCATCAACGACCAACCCACCCTCCTCATAGACCGACCCCTCACCGCCGACACCACCCCGCCAGCCGCAGTCACCGACGGCATGACCACCATCACCACCACCCCACCCACACCCGACATGCGCCACGACGCCATACCACTCGCCGCAATCGCATCATGGCGCACACTCCTCGGCATCGAAACCGACACCGAAGCCGTAGCCGCCATCCTCCACGTCCGAGACCACGGCGAACCAGACCCAGACCCCCAAACCGGCGAAACCGCATGGACAAGCGCCTACAACGCCATCGAAAACGCCATCAACACCACCACCGCGCCCGCCGACAATACACCCGACGATCCGCTCACCGCCGGCCGCAACAAAACACGCGGCCTGCTCGGCCTCCCGCTCCTGCCGGACACGGCAACCACCAACCCATCCGCCGAAGACGAAACCGACGCCCCGACCACCATCGCACTGCCCGCCGGCATCGAACCAACGGAACTCGGCAACCTCCTCGCCGACCACGCCGACGACATCAACGACGCCACCGACCGATTCATCGAATCACTCACCCAAACCAACGACGGAAAGGACCACGACTGATGGATGACAAAAACCTCTACCCGGCCATGATCGGCAAACTCCGCGAAATGCTCGCCGACAGCACCATACAGATCGCCGCACTCCAAGCCCAGATCGACATACTCGCCAAGGAAAACCAACGCCTCACCGACCAACTCAACAAGGACGACGACAATGGCAACGCTTGACAGCTTCCGCGAAGCCGCAGGCGAACCCATCCAACTCGACCTAGCCAACGGCTACATCGCAGACATACGCCTCAACGCCGGCGACATCAACGGCCGCACCATCACCGTCGAACTCACCGACAACGGCACCCCCATCACCGACACCACCGGCATCACCGTCGCGCTCGCCTACAACACCAGTCCCGGCAGCGGGCTGGGCGACCGCGTGAGCATGCCGGCAGTGTTCGGCACCCCCACGGCCACGTACCGCGTCGCCGTGCCGCGCAAGGCGTTGCAGCACGCCGGCGCGATCCTCATGGGCATCGAGGTCAGCGTCAACGGCACGCGAACCTGTTCGCGCAACTTCCACGGCATCGTCGAACGAGCCGTGTTCGACGCGACCGCGCCCGACGCGCAGGATCAGATGGGTGTGCTCGACAAGCTCATAGACGACGCGACCACGGCCATCAACAAGGCCGTCAGCGCGGCCGGCGAAGCCAAGGACGCCGCAGACGCGGCACGCACCAGCGTGATCGAATACCGGCAGCTCTCCGACGACTGCAAGGCCAAGATCGCCGCCAGCGCGGCCGCCGGCGTGGTCTTCGCGACCCAATCCGACATAGACACCCAGTACGACAGCGTGATCGCGCCGGCATTGTCCGACGCCGAAACGATCCCGCCGCTCACCCAGTCCGACATCGACTGGGCGCTCGACATCATCAACCGATAAACAGGAAGGAGCCATCATGGCGAACACACAGAAGGTCATGACCCTCGCCGACACCGCCAAGCTCATCGCCAAGGTGCACGCCAACGCCGCCAAGGGCGTGCGATTCGAGTACGACGGCACCAAGGGCGAATACGGCAACATCGCCGCCTACTTCGCCGCCCACAAGGACGGCAAGGTGTACGGCGTCAGATTCCCCAAATACACGTACAGCAACGCGCCCACCGGCGTGAAGACCCGCGACAACGCCAACCTGACCATCGAGATCAGCACCAACGACAAGGCCGGCAGAGACGACTACAGCGCCCTGAACGCCTTCCGCACGTGGGACGTGAACGCCACCGTGGACGACGACGGCATACCCCACGTCACCGCCATCGACGGCATCGACACCCGCTTCAGACGCGACGGATCGAACGGCGACGTGTACGTCATGACATGCCCCGGCTACTACAAGCTCGAAGCCACGAGCACCCACAATGAATTCCTGTACAGCGACACCCAGTACGACGGTTACGCGCCATTGCCCGGCGTGCTGCTGCCCGACGGCAGCAAACGGCCATGCCTGTTGTTCGCGAAATACGCCGCCTCCCTCGACTCCCAGCAACGCCCCCTGTCCGTCAGCGGCAAGGAGATCGACCGAGAATTCGGCTCCCAGAACCGGGCCATCGACTACGCGCTCAAGAAAGGCAAGGGCTACGCCGGCCGCTGCGCCGGCGACACCTTCTACGTCCAGCTCATGCTCATGCTCAAATACGCCACCAAAAACTCGGACGTGCTCGGCGGCTGCTGGCAGTACACGCCTCAGACCGCCGTCACCAAGGCCGAAACCGGCGTCAAGCGCGTCATCATCGCCACCAGCTACGCCAACAACTTCGACGTCGGCAGCACCGTCAACGTCGGCACCGACAAGGAACGCAACAACACCGGCAACTACAGCGCCGCCCGGGCACGCACCATCCTGAGCAAGACCGCCATCGACGCCAGCAACACCGCCCTCAACCTCGACGGCGACGCCATCACCACGACCACCGCATGCTTCGTCAACAGCATGCCGTGGAAGACCGGGGCCACCGACAAGCTGCTCGGCACCGACGGCCGCCCATCCACCGCGTCCGCCGCCAACCACCAACCCATCCGCCTACAGGGCATCGAACTGTTCAACGGCATCTACGAAAGCGACGCCGACCTCATCGCCAACGCCGTCAAGGACAACGACAACCTCGGCCGCATCGAACTCTACCGCGTGTTCGACATCACCAAGGCATCCAAGACCTCGACGGCGAACTACACCAAGATCGGCGAATTCACCGCACGCGACAAGACCACGAACGACTCAGGGCGCTACGCCGAGGACTTCACCCTGTCCAACGGCGTCATCATCCCCACGGGCCTGAACGCGACGAGCACCACCGGCATGTGCGACGCCATCGGAGCCAACCCGCTCACATCCCAAGGCCTCCGACAGGTGCGGCGCTTCGGCTCCCTCGGGGATGGGGCTGCCTGCGGCGCTTTCGCCGCGTACCTCTGGAACGGCCTCGCGGATCGCTGGTGGGGCTTCGGGGGCCGCCTGTCTGCGCTCGGTCGCACGAAGGCGTAGCCGCAGTGCGATGGGGGGTGAAGCGAAGCGAGGGGGCGAAAGCCCCCTTTCTACGTTTCGCAACTCTTTGGGATTTGTGGCGGTACGCCTCCGACGTCCGTGCGTGGTGCAGCGCTTCGGCAACCTCAGGGATGGGGCTGCCTGCGGCGCTTTCGCCGCGAACCTCAGGAACGACCTCGCGAATCGCAGGTGGAACATCGGGGGCCGCATATCAGGAACCTGTCAACGCATATACGCCATTACGCCACAACTACCCTCCACGCCAGCCAGTGAGAGGGCAAGCCACGGCCCAGCCGAAAATCAAACCGAGCACCCGGCCGGTAGACGAACCCATCCAGCACCGTCGAACGCCGGCATAGTCCAGATAGGAAACGCTCTGAAAACCCATTGCAAGCACACCCGCTGCGCCACGCCCATGTTCGTCCGCAGGGCGATCGATCACTACCTCAAGGGCAAACGGTCCCGCCGTGACGTCACACGCTTCCTCGAAACCCACCCCGACCTCGACCGCCTCGCCAGCCAGATCGGCGACGAGATACGCGAAGGCCGATACCGCGACACCAGGATCACGTACTTCAACCGCGTCGAACCGATCAGCGGCAAACACCGCGTCATCGGCCGCGAAACGGTCAGGCACCAGATATACGACCATGTGGCCGTCATGGCCCTCCAGCCGTTGTTCGACGCGAAGGTGGGCCGATGGCAGACCGCCAGCATCCCCAATCGCGGCACCATCGACGCCCGCCGCGCGATCAAACGATGGACACGCGAACGATCCAGCAAATGGTTCGTGAAGCTCGACGTGCGCAAATACTATCCCAGCATCGACCGCCCCACATTGAAGGCGATGCTCACGCGCGACGTCGGCGACCCAATCCTATTGCGCCTCGTGTTCCACCTCATCGACCGGTACCAAGGCGACAACGGCCTCAACATCGGCAGCTACCTGAGCCAATGGCTCGCCAACTACTACCTCAGCCACGCCTACCACTGGATCGAATCGCCGGCCATGACCATCGAACGCACCAGCCGGCGCACCGGCGAGATCACCCGCCGCCGGCTCATCACGCACCAACTGTGGTACATGGACGACCTGCTGCTCATCGGCACCTCCAAACGAGATCTGAAGATCGCCGCCCGCCGCACCGTCCGCTACCTCAAAGACCGGCTCAAACTCGACGTGCACGAGGAATGGAACTGCAAACGCCTCGACCTCGAACCCATCGACATGGTCGGCTACACGTTCCGACCCCACGGCCGCGTCAACATCCGCAGCGGCGTGTTCCTCCGCGCCCGCCGCACCTTCAACCGCGCCAGACGCCGGCCCATGACCGAACAGCTCGCGCGACGCTGCTGCTCCTACTACGGATACCTGCGCAACAGCGACAGCATCCGATACCGGCGACGCCACCGCATCGACCACACCATGCGCCGCGCAACCCGGTATTTATCCACCCAACACAGGAAGGAAAACCCATGCTCCAGACCGTATCCAGCCCCGAACCCCTCAACGAGGTCAGCTACTACCCGCGCGGCGACGGCCTCGCGGACATCCGCATCCGCCGCAACATCACCACCGTCATGCACGAGGACGGCGATACCACGTGGACGGAATACACCGCCGACGAAGCCTATACCGTGCGCGACCTGACCGAACAGGAAGCCATCGAACAGGCCGACAGCATCTGGCTCGACTGCGTGCAGGCATCCAAATCGGACAGTCAGCGCCTCGCCGGCTTGGAGGCGTCCAGCCTCGATCAGGACGAGGCATTGGCCGAAATCTACCAGCTGCTGTCAGGGGGTGAAGCATGAGCAAAGCCATGATCCGCGTCTACGCGCGCCTCGTCATCGCCGGCCGCAAGACCATCGACGACGTGCCCGAAGCGGGCCGCGAAGCCGTACGGGCATACATCGCCGGCCTCGACGAGGGGAGCGGAGAGTGAACCCCATAGCCCAGCAGCTCACCGTCTGGGCCGCCACCGGCATCATCACCGCCCTGGGCGGATACATGCTCGGCTGGTGGCGCGGCTACCGACGCAAATCCGACGCCATGCAGACCGGCGTGCGCACGCTCCTGCTGTGCAAGCTCGAACAGATGCAGCGCGAAATGGTCGCCAACGACGGCATCGCCGACAACACCGCCAAACGGACCGCGCAGCTCGTCTACGACAGCTACCACAGCCTCGGCGGCAACGGGCACGGCACCCAAGTCAACCAGGACATACAGGACGCGCCGATAGCCCCCAAGAAGGTTTAGCCCTCGCCGGACATCCCGGCGGGGGCTGTTTCATATGCCCACCCAACACAGGAAGGAAAACGAATGGGCAAAATCAAGAACAAAAGCAAGCCGCTACAGGCCCTCATCGCGGCACTGTTCGCCGTGCTGCTCGCGTGCACGCCGGCGATCGCGATGGCCGACATGGTCGGCATCGACGTGTCCGGCTGGCAGGACGCTAACGTGACCTGCACCGCCAGCTACGACTTCGCCGTAGTCAAGGTGTCCCAGGGCGTAGGCTTCGAGAACTCCAGTTGGCGCACGCAGGCCAAGTGCGTGACAGACCGGGGCAAGAGCCTCGGCCTGTACCACTACGCCGGCGGCAACAACGCCGAGGCCGAGGCCGACTACTTCGTCGGCCGGGCGAGGGACTACATCGGCAGGGCCGTGCTCGTGCTCGACTGGGAGTCCTATCAGAACGCCCAGTGGGGCAATTCCGACTGGGTTCGCCGGTTCGTCCAGCGCGTCCACACGCTCACCGGCGTATGGCCGATGGTGTACGTGCAGGCCAGCGCGCTGGGCCAGATACCCGGCGACGTGCGCGCCAACTGCGGCCTGTGGGTCGCCCAGTACGCCAGCAACGCGCCCACCGGCTACCAGAGCCGACCGTGGAACTACGCGGTCTACGGCGAGGCCATGCGCCAGTACACCTCCAACGGCTGGATCAGCGGCTACAACGGGCCGCTCGACCTCAACTACTTCAGAGGCGACGCAAGCCAGTGGCAGGCCTACGCCAACCCCGCCGGCGCAGCCAAGCCCGTAACCCCGCCGCAGACCGAGAAGCCGCCGACCCAGACCATCGACCTACAGGCACTCGCGACCGCCACGATCCGTGGCGACTACGGCAACGGCCAGCAGCGGCGCGACGCGCTCGGCGCGAACTACGACAAGGTCATGGCGATAGTCAACCAGCGCCTCGGCTCCGCGACCGTAGCGACGCAGCAGGCCGCGCAGGCCAACACGACCCGCGTGGCCGTCCGCTCCGGCGACACCATGAGCGGCATCGCCTCGCGCACAGGCCTGTGGCCGCTGTCCAGGTGGAGCGTGCCAAGCGGCAACCTCAACCTGATCTATCCCGGTCAGGTCGTCACCTACAACGGCGGCGGCAGCGTCGCCACCGGCAGCAACGCGCCGCCGGCAACCCGTACCGTGACCGTGCGCAGCGGCGACACCCTCAGCGGCATCGCCGCCCGCCTCGGCATCGGCTACACGCAGCTCACCGGCTATCGCAGCGGCAACCCCAACGTGATCTACCCCGGCGAAGTGCTGCACTACTGAGCGCCGACCCGAACCCGACCTAGGAACCTTGAACCAGACACCGGGCGAGGTTCCTAGGTTTCAAATCACAGAATCGAGGACAATATGACCGACGAAAACACCGAACCCAAGACCGCCGGCACGGAGCCGACCGTGCCCGATTGGCTGCTGCCGAGCCGCGTCTATGACGTGCTCAAATGGCTCGCGCTGATCGTGCTGCCGGCCGTCGGCGTGCTCGTGCAGACCCTCGGCCCCGTATGGGGCTGGACGTGGGCCGATCCGGCCGCGACGACCATCAACGCCGTCGCCCTGACCATCGGCGTCGTCATCGGCGCAAGCACCCTCAAGGCCAAGGCATCCAAGGCCTGACATAACAAAGCCCCCGAACCTACCGCACTCACGGTATGGTTCGGGGGCTTTTCGTCGTTTATGGGCTAGGCGTGGATCGTTTCGCGGCGTCGCGTGGTGCGCAGGCGGTCGGCGATCCATGTGTTGACGACGGCGTTGCGGCTGATCGCCAGATCAGCGGCCTCCTCGTCCAGTTCGCCGACCATCCATGCGGGCATCGTGAGCGTGATGCGTTTTTCCAGCGGGGGGTGATGTTCGACCACGGGATTGCTCATGTCCACGTAGTCGAGGATGTCGTCGCCGTTGTCGAACATCTCCTCGAGCTGGTCGCTGGTGATCGCCTTGGCGTCTGGCTTAGTCTTGGCTGTCATAGTATGCCTCCTCGTTCTTGCGTGATCTGCGCACGGATATGATGCGGATGCGTTTGCCGCGCTTGGTGGTGATCGCCGTCCAGTGCTTGCCGTCGATCATGCCGAGCACGATGTAGCGCACGTCGTCGTTGCCGGGATTGGGAGCGGTCAGCGTCACCGTCTTTGAGTTGTCCCACATGCGCTGGGCCGCCTCGAAGTCGATGCCATGCTTGGCGAGGTTCTTCGCGCTCTTCGCCGGATCGTATTCAAACTCCATCAAACCTCCTAATACGTCTATTATACATCAATATGACATCAATACAACATCATGCGGCGAGGCGCGTGGCTTCCACTGCGGCGCGCAGGCGGTCGTCGGGCATGGCGATGTACCGCTGCGTGGTCTCGACCGAGGCGTGGCCTAGGAGCTTGGAGACGAGCAGCAGGTCTCGTGTGGCGGCGTAGGTCGTTGTCGCGTACCTGTGGCGCAGGCTGTGCGCCGTCCATCCGTCGCCCAAGAGGTCGCTCAGGTGTCGGCCGACGTAGGATGATTCGGCGTGGCCGCTCCATCGGCCGGGGAACAGATAGCCGTTGGCGGATCGGATCAGCAGGGCGAGGTCGTCGCCGATGGGCACGATGCGTTGCTTGTCGCCCTTGCCGACGACCACGAGGCTCCAGCCCACGAGGTCGCGCATCACGTCGCGGCTGTGCACCTTCGCTATCTCGAAGCGCCTCAAACCGCATTCGGCGCCGAGGCGCAGCATGAGCCGTTCGCCGTCCGTGGCCTTGCGCAGCGCGGCGAGTATCACCACGTCCGGGCATGGGCGGGGATGCGGCTCGGGACGCTTGACGGTGGGCAGGAACTCGCTCGGATCGGCCTCGCTGCGGCCGGACGCTTTGAGCCATCGGAAATAGCTGACGCAGGCGTTCTTCGCGCCCTTGCGTGTCTCCGGTTTCCAGTCCTTCGCGGCGAAGTGGGCGAGCAGGTCGTCGCCTTCCACGTCCCTAGGATCGCCCTCAAGCGCCCTCGACAATGCGGACATCTGGCATCGGCGGGTGCTGATCGTGTTGGGGGAGTAGCCCGCCGCCTTGAGGGAGTCGAGCCATAGGTTGATTGATTCTGCCCAGAGCGGGCTTGGATGTTGTTTTTTCAC

Protein sequences of DBSCAN-SWA_1

>NZ_CP046514|326407:351553|332652_333105_+|WP_060618783.1|DBSCAN-SWA
MDGYPSTPLNLSDGTTMTQDGGGEDETDDEKPFAQVGDLEARWHALTGDERTSAEALLADASDLIRTTCPRWHTAKPATLKRIACMAVKRAMQAGPDMSGVTQSTQTAGSYSESLSYANPAGDLYLTTSEKEALGGDGEAWAYDMAGGAA
>NZ_CP046514|326407:351553|329290_330493_+|WP_060618786.1|DBSCAN-SWA
MDSNSLPPSNLSPAQRKAFNSHLNDLWDDYQDELSDLIIEAKTMVPNSLYFGDDPTGQARLQLEDYARKANLIVQDYYRNVRAAWAEAAGITMPDYKEAQVSSDRAFWQIVGGYNNTMHVGAKFTDVINGRSKAGLTMDHLWAVNTQGYTEDDWARLAKDIINETARLTGRFTAQNDPTRPKYARVPQGKTCAFCAMLASRGFVYASEDTAGKWNRYHHDCDCKIVPSWGETKLEGYDPDKFKRMYKAAKSRAGTSETNAVMKTMNHMFPDELTSGVFELSAEWPAEVIQPRAKTWDHVFENHGPDATVPGKTHFPKEWDEKKIKWAVEETVVAPDLVIPAGRERQTLYKIVEDEIVRVWLQKTRNTGGRFTVHTAHPVVPQQKEKLWQQIRNAKPHTGG
>NZ_CP046514|326407:351553|333720_334086_+|WP_060618780.1|DBSCAN-SWA
MSLNLEKTVKDWIDADPDGDGLTAYLEVPADRPQRFVTIERVGGRELEYSSHPTIAIQVWAESRWQAAQLATSQVLPRLLDLDLLDPIAAVGVESVIDLPDPGPPPQPRYQITISLDAAAQ
>NZ_CP046514|326407:351553|334117_334705_+|WP_060618779.1|DBSCAN-SWA
MAETNHNNKKNVSLGKPKKTGCLYYAPAGTALPTDATTALPAAYTCVGYLSEDGVTNATDTDTTDINEMGGIKVLSEISGYGETWQFNMIETNEASLKLRFGTANVTGTADKLTVYHAIPSGESLVLVFEIAMTGNRVKRIVVADGTITEFDDTTYSAGDAIGYGVTMSANPSDLINGATSVEYIANVAAASLSK
>NZ_CP046514|326407:351553|349809_350073_+|WP_156624920.1|holin|DBSCAN-SWA
MTDENTEPKTAGTEPTVPDWLLPSRVYDVLKWLALIVLPAVGVLVQTLGPVWGWTWADPAATTINAVALTIGVVIGASTLKAKASKA
>NZ_CP046514|326407:351553|333448_333724_+|WP_060618781.1|DBSCAN-SWA
MAKVKLNLAGFRAVRQSAPIQHAIDQQAALIAARANSMAQVEGATYEAATHVSTPKGSVALATTGHGSEGNVKAMVDNAKHNTLLKSVKQQ
>NZ_CP046514|326407:351553|350406_350679_-|WP_003809885.1|DBSCAN-SWA
MEFEYDPAKSAKNLAKHGIDFEAAQRMWDNSKTVTLTAPNPGNDDVRYIVLGMIDGKHWTAITTKRGKRIRIISVRRSRKNEEAYYDSQD
>NZ_CP046514|326407:351553|334759_335080_+|WP_060618778.1|DBSCAN-SWA
MAAKQPQDHKTPKNQPRTVEAMGVTLAVSPAIFDDLDMVEYLYDLQAAQEGDGTGAFAIVPFLKKLCGPQYAAMKDALRDPDTGRVSIDKVSEFIAQLLEQVAPNS
>NZ_CP046514|326407:351553|335091_335484_+|WP_060618777.1|DBSCAN-SWA
MLATAPDALEADFQRFYGLNLDLIWTGELPANRAAALAANLPRQSIIWQKLNPRLAWDDQTYLLADIRDSLAFLAWTKTKEASRKGARWRGQLQRPGTVRHEATGGEVMAMDDEQLAAYLAAPRTTIREA
>NZ_CP046514|326407:351553|343852_344575_+|WP_156624904.1|DBSCAN-SWA
MATLDSFREAAGEPIQLDLANGYIADIRLNAGDINGRTITVELTDNGTPITDTTGITVALAYNTSPGSGLGDRVSMPAVFGTPTATYRVAVPRKALQHAGAILMGIEVSVNGTRTCSRNFHGIVERAVFDATAPDAQDQMGVLDKLIDDATTAINKAVSAAGEAKDAADAARTSVIEYRQLSDDCKAKIAASAAAGVVFATQSDIDTQYDSVIAPALSDAETIPPLTQSDIDWALDIINR
>NZ_CP046514|326407:351553|338573_339353_+|WP_060618775.1|DBSCAN-SWA
MLYQRRMRLPHVEDPTLNGVPLERMMLSLSSDGVTIDAAKPTLSMQDMPGRDGRLDLTLTDPTGAACMGDRAITLSLYAIGGEDDILTAKTRLAALAGTIVSLSWRSLPGEYKGRMSLGAWADKWAGGHQIGTLVQAEIDARPYLIGRSRSIALKTGMNTIHVKGNRPCWPTWTLTPASGAKTVSIKDAHGHKLAIASTTAITGRISIDTDPDKRELRVNGNLMAPTLESDYFPLLPGPNTPTLTGCTGTLTYRPLTLI
>NZ_CP046514|326407:351553|333101_333437_+|WP_060618782.1|DBSCAN-SWA
MRGETITLIHRTKTGEDPGGGIIWNTREEQVDDVLIQDGSQSNSTDPIRPDGIRTAKTIHMPRAWPYRSLRGAKARIDGVEYTVIGDPRPYTGGITPTRWNLTVELADTRG
>NZ_CP046514|326407:351553|335485_338554_+|WP_060618776.1|DBSCAN-SWA
MAIEIATAFVQVVPSMKGVGKAIESAFGSASETAGNTAGIKAGNGFAGGFGAKLGVITGIAQSVAGKAIEAFMGLSGEITSASDSAQKFASTLNFAGVSEQQIKRLTASTQDYADKTVYDLNDIRNTTAQLAANGVPNYDRLAEAAGNLNAVAGGSADTFKSVAMVLTQTAGQGKLTTENWNQLSDAIPGASGKIQQALKEAGAYTGNFRDAMADGQITAQEFNDAIMSLGFTDAAVEAATSASTIEGATGNLEAAFVKLGASVLDSVKPAITGGMSWIADGVTNAVPVVQAGIEGLIGWFQRLYSKLEENGAITAFKSAWDTIRDAIMGVVNMVIDWVKLMPPDGVATAIKLIADTLNLIVGNAGKLAPVLIPAVAAFLGFKTATAGITAVAGGLDGIFNAAVKVKNAANGVTDLVNGIGGISGRIQKIAASTKIAQNAQLAWNAVTSAGTAIQRAFNAVLKANPVGFWVTIFATVVAALVWFFTQTEVGRKAWAAFTSWLSETWAALVEGAKAIWNGLGEFLADLWATITGGVQSAWDGIAGFFTGLWQTISGGVTGAWTSITTFLSGVWTGISTTATTIFTGIRDFIVNVFTVIGALIVAPLQAIQNGINTVFGWILSFITQQMNSTNTVWSTVWTAIYNVVNTIFTLISGYISTVVNAIRTVIVVFLDLLKGDWQGAWDAIKSFFTTTWDGIKAFLSNILDGIKSIWTSVWTAVSQFFTDVWNRIVAFFTPIINGIRNTIGNVLNAISGVWTSVWNAVRSVASAIWNAISGVVSTCIQNVRNTISTVLNAISGVWTSVWNSVSSFLGNIWHGITSAVSNGIQSVSNTVGRIRDTVLGAVSGAGGWLYDTGRQVIQGLINGIGGAFQWVRNTISNLGSSLVGWAKSVLGIHSPSRIFRDEVGKWIPAGMAQGIDKASGLVADSIDGLTDMVPTVSLKTDTSRLETPLAYHGTVNGGRMAYTIDDSQGGYATKQDIIDAIDAALAAGITLNLSDRGGEVMAGKLAKPMSYELNSLAMRGR
>NZ_CP046514|326407:351553|343102_343699_+|WP_060618991.1|DBSCAN-SWA
MQVTTINDQPTLLIDRPLTADTTPPAAVTDGMTTITTTPPTPDMRHDAIPLAAIASWRTLLGIETDTEAVAAILHVRDHGEPDPDPQTGETAWTSAYNAIENAINTTTAPADNTPDDPLTAGRNKTRGLLGLPLLPDTATTNPSAEDETDAPTTIALPAGIEPTELGNLLADHADDINDATDRFIESLTQTNDGKDHD
>NZ_CP046514|326407:351553|339373_343093_+|WP_156625442.1|tail|DBSCAN-SWA
MIFDRWGNPLGDLPYVIKALRTRATDGTDTLDITTIGEINKDERIVFQDSMGRWAEYLCQSTQTARAAGMPVTVAYCAGSIAELSRTYIEDKRNRNANAKACLAKALEGTRWTVGTVETGTITGMANLAFYHCTVLEAAQKTADTYGLEVQTEYQPDPTGNQIGRRIIHLVEHRGSANTTKRFEYGKDLTQIKRDIDSGDVITRLYGWGKGIEQTNDQGEATGGYSRKISFADVNNGKPYVQDDQALADWGIVGADGTRHHSEASVDFPDCEDPKELLALTKNALKTRTTPVVSYTADVTALGQAGLSAEGTDVGDSVQIIDTSFTNPLRLEGRILQIEEDLAGSLADTKITLGNIRQSYTQRLAAQQQALDKLVSNSGAWNSAAGGTGPYMKDLIDRINQIMNATGGYTYLKPGQGIYVYDKPEDQNPTQCIHIGGGYWRIADHKNANGNWDFRALANGKGIFADTIFTGRLSDAAGLNFWDMDTGEFSLSARSTVGGKTVQEYADGALSDANSYTDAAKQAAITEAKRQADAADTAKLAEAKKYAEAKAGEAETAAKAQSKADGEAAKAAAQAYVDALDESLGQRSIFDRLTNNGKTQGIYLSGGLLYLNATYMKTGVLDAALVKAGRLTDKKGLNYWDMDTGEFSLSANSTINGNKASGLATQTQAQKLATDAQTAAKAYADRVGASTLSSAKSDATAKANTALSGAKTYVEAIMAYGSNLVRNPNGNPDHDLDKLGASKLTKTMPATHPEGITSAIHLGNVRDTYFGWPLDTFRGHTFRLSGWAYRKAGNVTSSFGIHWTDTGNGNHWQTIAQSAANANGWTYVSGSYAVPSNAKTARLWMQVDRNTATASDADWYWTGLQCTDETAARSYVDTFEGELTQTYIFNKLTNNGQKQGLYLSNGLLYINATYMKTGVITGKRSYWNLDTGQFVMTDANGNETVHLDGDGADNLLTGTFRTARTGNRVQISPSFKQTEISGTDSLEGAGIQFYHGSGSYQHPYIAVESTTQQEGEVSALTFNGGRRAEHDPGAFARIGERKADDNTTKVGTVFLAAEKDYDSTDPSSRRAYLSLWSPKTGDTTATLAARDPNGLVGIQADIDSGYLYMGGFLGGFSGGRSTFQTAWWEGQNIGAMKYTQYTLTSSNPAKYGSYKAFATVDHRQDDPGLFIATVSDCTASGWSIWVYTPPERVVTNMDASWNRNTSTGVVSNLSINTHYAALFQGNKPYQLHTIGFLKK
>NZ_CP046514|326407:351553|346587_347823_+|WP_156624909.1|DBSCAN-SWA
MFVRRAIDHYLKGKRSRRDVTRFLETHPDLDRLASQIGDEIREGRYRDTRITYFNRVEPISGKHRVIGRETVRHQIYDHVAVMALQPLFDAKVGRWQTASIPNRGTIDARRAIKRWTRERSSKWFVKLDVRKYYPSIDRPTLKAMLTRDVGDPILLRLVFHLIDRYQGDNGLNIGSYLSQWLANYYLSHAYHWIESPAMTIERTSRRTGEITRRRLITHQLWYMDDLLLIGTSKRDLKIAARRTVRYLKDRLKLDVHEEWNCKRLDLEPIDMVGYTFRPHGRVNIRSGVFLRARRTFNRARRRPMTEQLARRCCSYYGYLRNSDSIRYRRRHRIDHTMRRATRYLSTQHRKENPCSRPYPAPNPSTRSATTRAATASRTSASAATSPPSCTRTAIPRGRNTPPTKPIPCAT
>NZ_CP046514|326407:351553|348492_349725_+|WP_156624917.1|DBSCAN-SWA
MGKIKNKSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQDANVTCTASYDFAVVKVSQGVGFENSSWRTQAKCVTDRGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDWESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNAPTGYQSRPWNYAVYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPAGAAKPVTPPQTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLGSATVATQQAAQANTTRVAVRSGDTMSGIASRTGLWPLSRWSVPSGNLNLIYPGQVVTYNGGGSVATGSNAPPATRTVTVRSGDTLSGIAARLGIGYTQLTGYRSGNPNVIYPGEVLHY
>NZ_CP046514|326407:351553|331421_332327_+|WP_060618785.1|capsid|DBSCAN-SWA
MALDTSKVLLPKEVATVITKRAKDTSTIAALSPSEPQLFLDKDYMVFTGNSEAEVVAEGAQKSSYEETLTPVVGKRFKVQTTTRVSNELQWADEDAKLEITSKILADQAAAMGRVLDYVIYHAFDPKKKTTLDGFNALAKTAVGVTATDDRVADIDSLAEAVSDEYDINGIAMSKTMANELRKIRVPSTGQRFYPEIPINLQVGNLDGIPAATSGTVNGRLITPATGILAFLGDFRLIRWGMVRDIWSEIIEYGDPDNTGKDLKGVNQIAYRTEAMYSYAILDPKGIAVLKKPTSTGRAAK
>NZ_CP046514|326407:351553|347753_347984_+|WP_156624911.1|DBSCAN-SWA
MHEDGDTTWTEYTADEAYTVRDLTEQEAIEQADSIWLDCVQASKSDSQRLAGLEASSLDQDEALAEIYQLLSGGEA
>NZ_CP046514|326407:351553|330842_331376_+|WP_016462172.1|DBSCAN-SWA
MFLNHTPRHVRFVAAPPEGGMASGGADQPAASSESEDVGEPIDWEAKYKEALGHSRDWEKKAKANKAAADELEKLKEASMTEQEKAAKHVKELEDKVASYETAKQRAEWKAQASAETGVPADVIEGDSLEAMQSHAKRIHELLNPKPKAPAVHGADRQPSGKGPNESMVNYLRNLGL
>NZ_CP046514|326407:351553|348111_348429_+|WP_156624914.1|DBSCAN-SWA
MNPIAQQLTVWAATGIITALGGYMLGWWRGYRRKSDAMQTGVRTLLLCKLEQMQREMVANDGIADNTAKRTAQLVYDSYHSLGGNGHGTQVNQDIQDAPIAPKKV
>NZ_CP046514|326407:351553|326407_327841_+|WP_156624901.1|terminase|DBSCAN-SWA
MNTRIDGASCQIIPDDLYTSGEPSLNRLAAAAGDRFDVWQRQINRIILAKSADGFWSARNTVLSIPRQTGKTYDIGWIAIHRAARTPGMRIVWTAQHFSVIKDTFESLCAIVLRPEMSGLVDPDHGISLAAGKEEIRFRNGSRIFFRARERGALRGVKKIALLVIDEAQHLSDSAMASMLPTQNRAWNPQTIYMGTPPGPRDNGEAFTRLRDKARAGRTHSTLYVEFTADRDADPLDRDQWRKANPSYPSHTSDESIANLWENLTGDDFRREALGIWDEHALSQAIDRRQWEEATIERRRPGGVMSFGIDMNPQRTRLTIGACMRYDDNTAHIELAEYRDTNHDGTMWAVNLIDKVWEQTAALVIDGQSPATALLPDLAQAGVTVTVTAATDMGRACGRLQDMLRDGTLTHLPEDGQQPLWQAAAKATTRPIGKNGLFGWNRPDDDTDISPLNAVTLALHGAMTTRRDPTQETETWF
>NZ_CP046514|326407:351553|350728_351553_-|WP_060618767.1|integrase|DBSCAN-SWA
MKKQHPSPLWAESINLWLDSLKAAGYSPNTISTRRCQMSALSRALEGDPRDVEGDDLLAHFAAKDWKPETRKGAKNACVSYFRWLKASGRSEADPSEFLPTVKRPEPHPRPCPDVVILAALRKATDGERLMLRLGAECGLRRFEIAKVHSRDVMRDLVGWSLVVVGKGDKQRIVPIGDDLALLIRSANGYLFPGRWSGHAESSYVGRHLSDLLGDGWTAHSLRHRYATTTYAATRDLLLVSKLLGHASVETTQRYIAMPDDRLRAAVEATRLAA
>NZ_CP046514|326407:351553|344591_346172_+|WP_156624906.1|DBSCAN-SWA
MANTQKVMTLADTAKLIAKVHANAAKGVRFEYDGTKGEYGNIAAYFAAHKDGKVYGVRFPKYTYSNAPTGVKTRDNANLTIEISTNDKAGRDDYSALNAFRTWDVNATVDDDGIPHVTAIDGIDTRFRRDGSNGDVYVMTCPGYYKLEATSTHNEFLYSDTQYDGYAPLPGVLLPDGSKRPCLLFAKYAASLDSQQRPLSVSGKEIDREFGSQNRAIDYALKKGKGYAGRCAGDTFYVQLMLMLKYATKNSDVLGGCWQYTPQTAVTKAETGVKRVIIATSYANNFDVGSTVNVGTDKERNNTGNYSAARARTILSKTAIDASNTALNLDGDAITTTTACFVNSMPWKTGATDKLLGTDGRPSTASAANHQPIRLQGIELFNGIYESDADLIANAVKDNDNLGRIELYRVFDITKASKTSTANYTKIGEFTARDKTTNDSGRYAEDFTLSNGVIIPTGLNATSTTGMCDAIGANPLTSQGLRQVRRFGSLGDGAACGAFAAYLWNGLADRWWGFGGRLSALGRTKA
>NZ_CP046514|326407:351553|327840_329340_+|WP_060618787.1|portal|DBSCAN-SWA
MPATDHNGLAITNPATQDAYLAVQSANITRIKGVEDDDMPTIQKLLTTWRDHYARNMLRAEYYQARYRYNGVAYSIPKQMRALAKPMIGWPNKAVRALADLNVFEGFDAPDPLQAQVDELVDDNAWDTDVSEAITSAYIHGCSFITVYEDPDEPGRILMLPRSADWSAGIWDRRRRRLGSALTITDKDDRTGRITAFTAWLPGKVYEIDDSEGQWTARTIETHLDRPSVVPLVNDAQSYHPLGNSRITRTLMNLTDFGLRTMVRMEATAEFYAAPRVWFIGASKKFTDDTWSSIVSVMNGMPANKNGDKPTMQQLQQASMTPHADMLRTIALMVSSETDIPVNDLGITMDNPASAEAMAEAERKLSRTADRQNKRFGRALKEAMSIALAYQGADPDALRELRPIWAPVKETSDAARADWYQKVASTNPDFADSDVGLTRAGLTLDEIKAHRAYEKQKRTEAAVDTLRARLHAADQTATGTEAENGQQQPAAEQPQPGAA
>NZ_CP046514|326407:351553|330450_330711_+|WP_016462171.1|DBSCAN-SWA
MATDSQCEAAYRRLRPYCDVLEEAEELDYGLAAGEQYYALSWLIAAILENHVTVPQEPLLDAFGLLEDEDKDEYASALDKELAQPT
>NZ_CP046514|326407:351553|332326_332641_+|WP_060618784.1|DBSCAN-SWA
MAAPLTQTLVVQKTDEADEAGLAIPVRLVKPDGTPFAEGVATVSWDSITGKPATFTPPAPTASARGGVLQQAAEAQLAASADSAAIIAKVNATLTKLKAAGILT
>NZ_CP046514|326407:351553|350138_350423_-|WP_003809887.1|DBSCAN-SWA
MTAKTKPDAKAITSDQLEEMFDNGDDILDYVDMSNPVVEHHPPLEKRITLTMPAWMVGELDEEAADLAISRNAVVNTWIADRLRTTRRRETIHA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
322948:322962	attL	NA	NA	NA	NA
WP_156624901.1|326407_327841_+|terminase	terminase	V5R8Y1	Arthrobacter_phage	6.2e-86	38.1
WP_060618787.1|327840_329340_+|portal	phage portal protein	A0A068F3B8	Mycobacterium_phage	2.8e-57	33.7
WP_060618786.1|329290_330493_+	hypothetical protein	A0A1D8EU68	Propionibacterium_phage	4.5e-21	45.8
WP_016462171.1|330450_330711_+	hypothetical protein	NA	NA	NA	NA
WP_016462172.1|330842_331376_+	hypothetical protein	NA	NA	NA	NA
WP_060618785.1|331421_332327_+|capsid	phage major capsid protein	A0A0H4INI2	Propionibacterium_phage	1.2e-34	33.4
WP_060618784.1|332326_332641_+	hypothetical protein	NA	NA	NA	NA
WP_060618783.1|332652_333105_+	hypothetical protein	A0A1D8ETI1	Propionibacterium_phage	7.3e-25	51.7
WP_060618782.1|333101_333437_+	hypothetical protein	Q7Y4I1	Streptococcus_phage	2.5e-06	30.8
WP_060618781.1|333448_333724_+	hypothetical protein	NA	NA	NA	NA
WP_060618780.1|333720_334086_+	hypothetical protein	NA	NA	NA	NA
WP_060618779.1|334117_334705_+	hypothetical protein	A0A141E164	Streptococcus_phage	7.0e-20	38.0
WP_060618778.1|334759_335080_+	hypothetical protein	NA	NA	NA	NA
WP_060618777.1|335091_335484_+	hypothetical protein	NA	NA	NA	NA
WP_060618776.1|335485_338554_+	tape measure protein	R9QN01	Lactococcus_phage	1.8e-74	42.4
WP_060618775.1|338573_339353_+	hypothetical protein	I3NL89	Bifidobacterium_phage	8.7e-42	37.0
WP_156625442.1|339373_343093_+|tail	phage tail protein	I3NL88	Bifidobacterium_phage	6.6e-180	63.0
WP_060618991.1|343102_343699_+	hypothetical protein	NA	NA	NA	NA
WP_156624904.1|343852_344575_+	hypothetical protein	I3NL86	Bifidobacterium_phage	1.4e-38	56.2
WP_156624906.1|344591_346172_+	hypothetical protein	NA	NA	NA	NA
WP_156624909.1|346587_347823_+	reverse transcriptase	D6PSR5	Lactobacillus_phage	1.7e-28	27.7
WP_156624911.1|347753_347984_+	hypothetical protein	NA	NA	NA	NA
WP_156624914.1|348111_348429_+	hypothetical protein	I3NL84	Bifidobacterium_phage	2.5e-16	69.8
WP_156624917.1|348492_349725_+	LysM peptidoglycan-binding domain-containing protein	Q8LTJ6	Lactococcus_phage	9.2e-38	43.1
WP_156624920.1|349809_350073_+|holin	holin	C9E2L0	Enterococcus_phage	6.1e-08	49.2
WP_003809887.1|350138_350423_-	hypothetical protein	NA	NA	NA	NA
WP_003809885.1|350406_350679_-	BrnT family toxin	NA	NA	NA	NA
WP_060618767.1|350728_351553_-|integrase	tyrosine-type recombinase/integrase	A0A1B3B212	Gordonia_phage	3.2e-55	44.4
354450:354464	attR	NA	NA	NA	NA