CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP040337	Bacillus luti strain FJ plasmid unnamed1, complete sequence	0 crisprs	NA	0	0
NZ_CP040339	Bacillus luti strain FJ plasmid unnamed3, complete sequence	0 crisprs	RT,csa3	0	0
NZ_CP040336	Bacillus luti strain FJ chromosome, complete genome	2 crisprs	c2c9_V-U4,csa3,cas3,DEDDh,RT,WYL,cas14k,DinG,c2c10_CAS-V-U3	2	5
NZ_CP040338	Bacillus luti strain FJ plasmid unnamed2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040336_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040336_1

957083-957267

Orphan

Consensus_repeat	Method
CAAATGCCATATCAAATGCCATATCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP040336_1

>merge|NZ_CP040336|1|957083-957267|CRISPRCasFinder
CAAATGCCAAATATGATGCCAATTATGGATAATAATCAAATGCCAAATATGATGCCGATTATGGATAACAATCAACCACCGAACATGATGCCATATCAAATGCCATATCAAATGCCATATCAACAGCCTATGATGCCACCGAATCCGTATTATCAACAACCAAATCCATATCAAATGCCATATCA

>NZ_CP040336|1|1|957083-957267|CRISPRCasFinder
CAAATGCCAAATATGATGCCAATTAT	GGATAATAATCAAATGCCAAATATGATGCCGATTATGGATAACAATCAACCACCGAAC
ATGATGCCATATCAAATGCCATATCA	AATGCCATATCAACAGCCTATGATGCCACCGAATCCGTATTATCAACAA
CCAAATCCATATCAAATGCCATATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040336.1\|WP_156573919.1\|959329_959866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040336.1\|WP_156573914.1\|951884_953414_+\|L-aspartate-oxidase	unknown	unknown	gnl\|CDD\|236147
NZ_CP040336.1\|WP_156573927.1\|964641_967026_+\|TIR-domain-containing-protein	unknown	unknown	gnl\|CDD\|379328
NZ_CP040336.1\|WP_151624876.1\|960210_960969_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293830
NZ_CP040336.1\|WP_156573925.1\|963205_964639_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP040336.1\|WP_098663526.1\|962145_963189_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225021
NZ_CP040336.1\|WP_156573912.1\|950589_951732_-\|IscS-subfamily-cysteine-desulfurase	unknown	unknown	gnl\|CDD\|179511
NZ_CP040336.1\|WP_071713307.1\|953433_954267_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|181221
NZ_CP040336.1\|WP_001093527.1\|957735_958380_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378211
NZ_CP040336.1\|WP_071713306.1\|954297_955404_+\|quinolinate-synthase-NadA	unknown	unknown	gnl\|CDD\|236489
NZ_CP040336.1\|WP_156573923.1\|961669_962149_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040336.1\|WP_000114530.1\|943650_944427_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_CP040336.1\|WP_000323609.1\|959891_960176_+\|ryanodine-receptor	unknown	unknown	gnl\|CDD\|366883
NZ_CP040336.1\|WP_071712903.1\|958413_958848_-\|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	unknown
NZ_CP040336.1\|WP_156573905.1\|944401_946324_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|223650
NZ_CP040336.1\|WP_000812275.1\|950047_950590_-\|transcription-repressor-NadR	unknown	unknown	gnl\|CDD\|224740
NZ_CP040336.1\|WP_156573921.1\|961097_961424_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040336.1\|WP_156573910.1\|949320_949968_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP040336.1\|WP_071713311.1\|948383_949235_+\|prephenate-dehydratase	unknown	unknown	gnl\|CDD\|237013
NZ_CP040336.1\|WP_156573908.1\|946373_948287_+\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|223650

Protein	Function_ID	Function_description	E-value
NZ_CP040336.1\|WP_098663526.1\|962145_963189_+\|hypothetical-protein	gnl\|CDD\|225021	COG2110, COG2110, Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only].	0.000424729
NZ_CP040336.1\|WP_156573914.1\|951884_953414_+\|L-aspartate-oxidase	gnl\|CDD\|236147	PRK08071, PRK08071, L-aspartate oxidase; Provisional.	0
NZ_CP040336.1\|WP_151624876.1\|960210_960969_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293830	cd16272, RNaseZ_MBL-fold, Ribonuclease Z; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. It includes the C-terminus of human ELAC2 and Escherichia coli zinc phosphodiesterase (ZiPD, also known as ecoZ, tRNase Z, or RNase BN) is a 3' tRNA-processing endonuclease, encoded by the elaC gene. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	2.82937e-14
NZ_CP040336.1\|WP_156573925.1\|963205_964639_+\|hypothetical-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	2.52945e-14
NZ_CP040336.1\|WP_156573912.1\|950589_951732_-\|IscS-subfamily-cysteine-desulfurase	gnl\|CDD\|179511	PRK02948, PRK02948, IscS subfamily cysteine desulfurase.	0
NZ_CP040336.1\|WP_071713307.1\|953433_954267_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|181221	PRK08072, PRK08072, carboxylating nicotinate-nucleotide diphosphorylase.	0
NZ_CP040336.1\|WP_001093527.1\|957735_958380_+\|hypothetical-protein	gnl\|CDD\|378211	pfam09580, Spore_YhcN_YlaJ, Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ). This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.	1.18679e-22
NZ_CP040336.1\|WP_071713306.1\|954297_955404_+\|quinolinate-synthase-NadA	gnl\|CDD\|236489	PRK09375, PRK09375, quinolinate synthase NadA.	2.08817e-151
NZ_CP040336.1\|WP_156573927.1\|964641_967026_+\|TIR-domain-containing-protein	gnl\|CDD\|379328	pfam13676, TIR_2, TIR domain. This is a family of bacterial Toll-like receptors.	6.16965e-20
NZ_CP040336.1\|WP_000114530.1\|943650_944427_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	1.48319e-109
NZ_CP040336.1\|WP_000323609.1\|959891_960176_+\|ryanodine-receptor	gnl\|CDD\|366883	pfam02026, RyR, RyR domain. This domain is called RyR for Ryanodine receptor. The domain is found in four copies in the ryanodine receptor. The function of this domain is unknown.	2.1545e-41
NZ_CP040336.1\|WP_156573905.1\|944401_946324_+\|FtsX-like-permease-family-protein	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.03951e-09
NZ_CP040336.1\|WP_000812275.1\|950047_950590_-\|transcription-repressor-NadR	gnl\|CDD\|224740	COG1827, COG1827, Predicted small molecule binding protein (contains 3H domain) [General function prediction only].	1.21165e-59
NZ_CP040336.1\|WP_156573910.1\|949320_949968_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	3.85012e-76
NZ_CP040336.1\|WP_071713311.1\|948383_949235_+\|prephenate-dehydratase	gnl\|CDD\|237013	PRK11898, PRK11898, prephenate dehydratase; Provisional.	4.77966e-157
NZ_CP040336.1\|WP_156573908.1\|946373_948287_+\|FtsX-like-permease-family-protein	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.96233e-09

>NZ_CP040336.1|WP_071713306.1|954297_955404_+|quinolinate-synthase-NadA
MSILEKVQPIETMLPERYYTMSTEDMEKRVREIKEKMGRTLFIPGHHYQKDEVVQFSDAAGDSLQLAQVAASNKEAKYIVFCGVHFMAETADMLTTDEQVVILPDMRAGCSMADMADIEQTERAWKELTKLFGDTMIPLTYVNSTAAIKAFCGRNGGATVTSSNAKQMVSWAFTQKERLVFLPDQHLGRNTAYDLGIPLDKMAVWDPHTDSLEYDGDIEEIQVILWKGHCSVHQNFTVKNIENVRKNHPNMNIIVHPECCYEVVAASDYAGSTKYIIDMIESAPSGSKWAIGTEMNLVNRIIQQHPDKEIVSLNPFMCPCLTMNRIDLPHLLWALETIERGEEINVISVDKQVTEEAVLALNRMLERV
>NZ_CP040336.1|WP_071713307.1|953433_954267_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MNTIKVKEALNRFFLEDIGERDVTSQLIFPDNLLSKGTFLAKDTGVFAGRLVIEEGFKLIDERIKVELHKKDGNLVEKGEIIATVQGPIASLLTAERVILNVIQRMSGIATMTHKAVLALDSSHTRICDTRKTMPGLRMFDKYAVVCGGGFNHRFGLYDGVMIKDNHIAFAGSITKAVTSVKEKLGHMVKVEVETETEEQVREAVAAGADIIMFDNRTPDEIREFSKIVPSAIVTEASGGITIEDLSKYGKTGVDYISLGALTHSVKALDISFNIEA
>NZ_CP040336.1|WP_156573914.1|951884_953414_+|L-aspartate-oxidase
MPSADVLIIGSGVAALRVAKEICHEKNVIIITKGTEHNNNTHLAQGGIAAAVATYDDPHDHFEDTLVAGCHYNKEEVVRYLVEEGPKEINNLIENGMEFDGDETGPHLGKEGAHRKRRILHAGGDATGKNLLEHFIQEVAPYVTVVEQEMVLDFIIENDKCVGVLTRNSEGELKRYDADYTVLATGGIGGLYAFTSNDETITGDGLAMVYRAGGELVDLEFIQFHPTMLYAGGRCPGLISEAVRGEGAVLINGKGQRFMMGVHPEQDLAPRDVVARAIHEQLLAGEKVYLNIEMIQNFEQRFPTVSSICKTNGVDINKKLIPVVPGAHFHMGGVKTNCDGETSIPNLYAVGEVACNGVHGANRLASNSLLEGLVFGKRIGQHILSRTVKERMKGLTEKEDKFIVLKHLPAKEEIQECMMKYVGIVRTEQSLSYAQRWLSKYGVRNMILQYDALTNEEITLINMLTVCELIVVSALQREESIGGHYRSDYLDRNTRKKEIVRVKRKLQLV
>NZ_CP040336.1|WP_156573912.1|950589_951732_-|IscS-subfamily-cysteine-desulfurase
MMIYLDYAATTPMSAEALQTYTKAATQYFGNEQSLHDIGGTASSLLQICRKTFAEMIGGKEQGVFFTSGGSESNYLAIQSLLNARSGKHIITTPMEHASIRSYFQSLASQGYTITEIPVDKGGLIRLVDVEAAITEDTVLASIQHGNSEIGTVQNIAEIGLLLKKYNVLFHTDCVQTFGKLPIHVFEMGIDSLSVSAHKIYGPKGVGACYINPQVRWKQIFPGTSHEKGFRPGTVNVPGIASFLTAAENILKNHMEENLRFKALRTYFLEQLRTLPLEIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQDPSKTMLAIGKTYEEAKQYVRFSFGQQTTKDQIDTTIHALHTIGNQFYRGVKS
>NZ_CP040336.1|WP_000812275.1|950047_950590_-|transcription-repressor-NadR
MKQNEQKKILGEERRQLILQWLLAANEPLSGNELSKKTNVSRQVIVQDISLLKARNEPIIATAQGYLYLKPQEKQQTFERVIVCQHKPAEVRQELTMLVDHGVTIKDVKVEHPVYGDLTASIMVSNRFDVEQYLQKIENTNASYLSQLTDGIHLHTIEADSKEKLDAACEALDKAGFLVY
>NZ_CP040336.1|WP_156573910.1|949320_949968_-|MOSC-domain-containing-protein
MGIELVHFSIGKPKQMKYGEDKEMITGICKDSTEEAFLSKDGFLGDDVADLKHHGGPDRAVCVYPHEHYALWEEEFQTTLPASTFGENITVTNMLERDVCIGDTYQLGEAIIQVTQARVPCSTISKRLGIPGILPRIVATGFTGYLCRVLQEGIVRKDSKITLLERHPNNISVLFSNEIYFHNRKDKDGIEKILAVPELADIWRDQLEDRLAKLK
>NZ_CP040336.1|WP_071713311.1|948383_949235_+|prephenate-dehydratase
MIRVGYLGPEATFTNMAVSRFFPEAEHVPYRTIPDCIDAAANENVDFAVVPLENAIEGSVNITVDYLVHEQPLSIVGEITVPIQQHLLVHPQYAEVWEEVYAVHSHPHAIAQCHKFLNEQLKGVTVRDMTSTSAAAQYVKEHPEEKIAAIANEAAAEKYGLAIVRSGIHTHKNNHTRFLVLHKKKKAVLPNNGENRGEKTTLMITLPADYAGALYQVLSAFAWRKLNLSKIESRPMKTGLGNYFFLIDVDKAYDDVLLPGVTMELEALGFSVTVLGSYSSYWL
>NZ_CP040336.1|WP_156573908.1|946373_948287_+|FtsX-like-permease-family-protein
MNIRQLALQNIKGNWRNYKVFFLSSCFAIFASFAYMSVIVHPYMQETLWYQNVRWGLIICNVIIISFFIIFILYATSIFIEARKKELGLYMLMGATKSNVIGVIMTEQILIGVFANIFGIGIGMIFLKLFFMVFSMLMRLPKELPVMFDVKAIGVTFITYMFVFILLSFISALRIWNIKIIRLLKEFRTDKKEKKTSIWLCIFGFICLGTGYALALQVTMETIGLYFFPVSILVFFGTYFSFTHGTIQLLEMIKRNKKIMYTYPYLFIVNQLSHRMKENGRFFFMLSMATTFVVTATGTVFLYFSSMQDMWRDGGAHSFSYIEKGVSTHEVFEEGTVEQLLHQYGYDDFQSMSFVGVYASFQSNKGETEVAPLIKESEYNQEARKQKQKTYHPKKGTVTLVYYSKYNHSNIYNQKEIQLQVMNQTYPFVFNGQKEGVQFNYHLSHINGLFFVMNDEDFDSIANKVPDSGKMMYRGYTLPNIENTKKLNEALRKHMKQDDNNAFRSNMELYVNMKEFGDITLFVGSFISILFFLTSCSIVYFKWFHNIASDRKQYGALSKLGMTKEEVWKVSRWQLCMLFFAPIIVGSMHSAVALYTFHNTIFMDGSLRKVALFILFYIAACIMYFFFAQREYRKHLD
>NZ_CP040336.1|WP_156573905.1|944401_946324_+|FtsX-like-permease-family-protein
MNFRQLALNNVKGNWRNYKAFLISSCLSIVVFFMYASFIYHPDVVSGNISMRDMISKGLESMNYIVVIFSALFILYANSTFLRARKKEFGLLTLIGGKKSQLGRMIILEQLMLGSIAIIVGIGLGMLCSKLFFQALSVILKIDKTLPLVWNGKAVLITAGVYFILFLILSLFSVWTVGRLQIIDLLREARKQKVEPFAFTWLCVAGIGCIIVAYVLSFQVTFMNFIMLFLPIVGLTIGGTYLLFTQGSTVVLKALQKRKKSFYTYPNMFVLSNLIYKMKDNARFLFVISIITAVVSSAVGTLYVFFEDMSYKAATSTPHAISYEEKGIHTHNVIKEGKTKELIKKHGFEEAREVTYVKLPGTQKITMFNSEHEVPMAIVSEKEYNVEVRKQKREQVREVHNEPGSATMVIMDMANDMMKIDRTKPYEIKINGQKQSVQLNEPTSFSVFNDSEYLIVNDQDFEKYAKLVPDEEKTKYYGYYIEDWKSTEDLVLDLKKEIAPDKQEELHNSVLAYKNIRESGAITMFIGFFVAVLFFFFACSMTYFKWFNDKEQDRIQFKSLKRIGMTDKEIRKIAIRQMGVIFFIPIVIGAIHSGFALHTLGKMLYMDLWKSGAIVIGTYVIASAIYFMIAQRGYLKHVQS
>NZ_CP040336.1|WP_000114530.1|943650_944427_+|ABC-transporter-ATP-binding-protein
MSVLEVKGLTKVYQSKGSVATTALNDINFKIEEGEFVGIMGPSGSGKTTLLNLLATIDKQTSGHVLVNGEEINQMRAAKLAEFRRTHLGFIFQDFNLLDTLSIKENIILPLVMAKKSVNEIDAKVLEIAKFLNIEEILNKKVYEVSGGQQQRAAAARAIIHEPTLILADEPTGNLDSKSAKSLMSALQDLHEQKKVTIAMVTHDPVAASYCERILFIRDGEIFSEIHKGRTKQAFFQEILDVLAMLGGEYHELSPARA
>NZ_CP040336.1|WP_001093527.1|957735_958380_+|hypothetical-protein
MNTKVKVIAASLLVTSALAACGTPKDNNAMDGRNYNYERTSYNDTHQYRDNVARNDRYTDYVTYRNGRNDTGYNYYRDVNYNGQIANPHPTRNITMNNSYINNDGKTAEKITNRVKRMNNVDRVSTVVYGNDVAIAVKPRNPVSNETALANEIRQAVANEVGNRNVYVSVRNDMFTRVDAMNTRLRNGTVTNDFNRDIVNMFRDIRYGLTGTMR
>NZ_CP040336.1|WP_071712903.1|958413_958848_-|branched-chain-amino-acid-ABC-transporter-substrate-binding-protein
MKKIKDERLILQTLKNIRIAFLFQSLGIIGILGYIGFTEGADQITKSPLWLLFILTSMVLSYLQLSISIDVEESEKEIQLTPYYKIVLRSLIVGIVMAIIYIIFSPERPLFEAILTGSILFLCFLASYSVSYFIKKRRLQDDDE
>NZ_CP040336.1|WP_156573919.1|959329_959866_+|hypothetical-protein
MGEEKELKIQQEQLKVEVHQTKRSSKTNFSYQMHTYLNNSIRFSDVKAAGISGVNVTMFRLFFDPSTIQMSWKFLILGASLIGLLVGIVFAILSIMPRFMEKKENGLIYWGSVADMTREDYIEAIKGAEGDHLLEELLSQNYTLSLIAKKKFAMTKYAFLFSIVGYIFLIIGEVVKAL
>NZ_CP040336.1|WP_000323609.1|959891_960176_+|ryanodine-receptor
MAYKPKAIDTSNVEVPKDIQELTELISKNTHEVWADQRLQEGWRYGEKRDEDKKEHPCLIPYEELSEIEKNYDRRTSLETIKVILALGYEIKKR
>NZ_CP040336.1|WP_151624876.1|960210_960969_-|MBL-fold-metallo-hydrolase
MKIYPLGVGQGFSTKYFHNNYIISISNTNILIDAGTTLRFSLEASPYTYTDIDYILLTHFHFDHVGGLEELLQRRYWSTTSKQNQKKPQIIIKECQLKQLESLLSPGLCNQNLTLHDYCDIHTLSDEQSSLTIENTIEIQFIDTTNFHCEDMISFALQIYDLNKQQNILFSSDIKKLKNSNLKEQINQETVAIFQDVDLTYNPVHAHLTEVLSYYPDTCRPILYAMHYPDHAPNTFSQYNLSFVQQGIPIMY
>NZ_CP040336.1|WP_156573921.1|961097_961424_+|hypothetical-protein
MLENLEERLLLHELTVDVPSGKRSFFIYKGDMSQAKATVFFVIAHGLSLDESGELYEAFDNEFSLSTSKEKKLLSLSSGGWIGIINQKQQNKTFLILHTNKKKERDIR
>NZ_CP040336.1|WP_156573923.1|961669_962149_+|hypothetical-protein
MEKALKGTNIAPDFDEIIRNLRKKIVSEINNISVKNDFYTSALNGIKQELEKREDSSRNVAVLCKSLIIEINKDICRIAGMPVSSFRKNIIEIKRNKVVEEWMINHFIILYEYNEDGRDNTPLYGPKTLEKDDIAIMYFTLLRVIKFLNKMLPKRMNVE
>NZ_CP040336.1|WP_098663526.1|962145_963189_+|hypothetical-protein
MNIINRVIVDSTFGDRSFLLCKGDLLESSGDGAIVITTYKNESGQIYGELVESIRQRMDIDTLKIAPFYHVNDQVFIGYTILQGDKQDKFVLTINFNRTHDILFSKEEYEELIEGVFATLAALEFSGYRFSSIALPVIGRKGLVGNYSAEITTLLEHATRWLKKSKYTKTIYYCIYLDEDVEIWNATLNQVLGRSIIPLHYSKEMDQIQKELLNILDSFPKSDAFWEDTFLPLRTALQRVNEIQFETLAAFGRKFAENTCQNLCELTGTDTALFDMNLRNIKNNNVLNRSMSQYMYGLRSFGNPAIHRTATLIGENRPTEEDIYVLLLMLRKILKLYGLLIYNQKLI
>NZ_CP040336.1|WP_156573925.1|963205_964639_+|hypothetical-protein
MEKRSMFIVFSDLKGFSKMNEQEFKNFYEHYLKLLVESIRSYKDKAIVWNTWGDAFIALFENGEDAVSLMLEYQNFFRKHKLSMTPRIAGHYGEVYIFEDPMLNNRKNAVGEHINRTARIEPVTFPGEIYITEDFVQAYKQFNEMEAVFFEDLGDVQLAKKFGEQHLHRLYSAKDEGWNVTNLFFKYNLKEAIPPRPQVIDVQERDVVQQVISVRDKDELLILQEKYNFDTYSGPFLLELAKVYKKFGVYDKALMYIKKVEAWSVVVNEINLYPFIEDKEVVKLKANCLTRMGNYDEAANLMHALLKENRIDSDALAMLAAQFKRRALYKEDCLLDRESINFSDLRKALDLYLEAFRVNPEDFYPAINAVYIQKILGLTDCFTFANYISDRWSEYNEESWWYYSTLAEVQLIHDRYEASERLMKRAIRLGKPNTFEKQSTLDQIKQYLFIMGLEKEGAGIVKLLRSESEKKTIVNRG
>NZ_CP040336.1|WP_156573927.1|964641_967026_+|TIR-domain-containing-protein
MEKVFISYSTKDASIADMLCSKLTGAEIEYWFAPKDIPVGGVYSKHIVQGLQECSCVLLILSENARRSEHVENEVELAFNYKKRIIPFRVDDSKLGSFFEYFIKKVSWFDAAVGEIEEHADELIVKIKESLAYDSLEANVNESEFYYEMIPSDISKEEGPNFSLNMSNKLFEIKDSEIDKISNIYEKTSNFSECLQELKKNHILFLHNEQAIGKYTTAIALANELNIESMYQFFPDMRWEQLVSTMLKENTVFIIDHITYDSLQGLQDPVIKQMIDSLKNHNSYFIITVNIDREEINNDIQKHMKFCPIPNEKEQIIKKHVGLLNKVDSEIEAVNHLLKKNEIKQYIDLVFVPRDAEYFSERVLCLLNGKIQEDDLLAVLRQNINERIEKLLHENSGIRKYTMLLALSIFNGMEYQFIGESAGRLRKMLEQELEIKDEIQVGSTLTTPVKQEIKQLGGVLYHAQTYSHLGVLPTTCAKFKYEEDARAILLESWKSYFTPELKNVFMKWLMEETMGSNKKINKRILETIAVLCKEDFLFIYNVTISNWAGQKKYIYNMKVIQLFLLLLQDKDNMVLVSRVLRYWTASNNYNFKKTAARVYGTKIGMMMYPQALAGLKEIFNKSNAALQDIAWESIENLFRLGENKTGYHGALFAFLRSWVQEESLSTSRREKLLELVILLICTLSPHMLVYLFTNKHIRSMSLVPIISACLGNEETRINTTKWIQNVFKKLENRGEVHQDLCEFMKELFIEGGDRIETKMRIILERLVESEQHYIISPVIPEIIEIQRGRKNDIY

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Crispr_ID: NZ_CP040336_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040336_2

3297207-3297342

Orphan

Consensus_repeat	Method
CATTCCTTTTTGTGTTTCCATCGTTTTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP040336_2

>merge|NZ_CP040336|2|3297207-3297342|CRISPRCasFinder
CATTCTTTTTTTGCTTTTTATTATTTTTGGCCCTTGATACGCTTTTTCTGCAGTCATTCCTTTTTGTGTTTCCATCGTTTTTCGATCTGGATATACTGTTTCTGTCTCCATTCTTTTTTGTGTTTCCATCGTTTTT

>NZ_CP040336|2|2|3297207-3297342|CRISPRCasFinder
CATTCTTTTTTTGCTTTTTATTATTTTT	GGCCCTTGATACGCTTTTTCTGCAGT
CATTCCTTTTTGTGTTTCCATCGTTTTT	CGATCTGGATATACTGTTTCTGTCTC
CATTCTTTTTTGTGTTTCCATCGTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040336.1\|WP_156576043.1\|3283744_3288118_-\|endo-alpha-N-acetylgalactosaminidase	unknown	unknown	gnl\|CDD\|372376
NZ_CP040336.1\|WP_156576042.1\|3281838_3283323_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|235382
NZ_CP040336.1\|WP_156576049.1\|3298318_3299662_-\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274815
NZ_CP040336.1\|WP_156576051.1\|3301727_3302831_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP040336.1\|WP_156576052.1\|3302942_3303563_-\|DUF1775-domain-containing-protein	unknown	unknown	gnl\|CDD\|226922
NZ_CP040336.1\|WP_156576041.1\|3280830_3281262_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP040336.1\|WP_156576048.1\|3294161_3296333_-\|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase	unknown	unknown	gnl\|CDD\|213701
NZ_CP040336.1\|WP_156576050.1\|3300762_3301626_+\|Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225306
NZ_CP040336.1\|WP_156576055.1\|3307545_3308904_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
NZ_CP040336.1\|WP_156576046.1\|3291769_3292936_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|131862
NZ_CP040336.1\|WP_156576047.1\|3292997_3293897_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP040336.1\|WP_156576053.1\|3303598_3305248_-\|copper-resistance-protein	unknown	unknown	gnl\|CDD\|224195
NZ_CP040336.1\|WP_128854967.1\|3299833_3300694_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP040336.1\|WP_156576054.1\|3305666_3306668_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP040336.1\|WP_071712472.1\|3307039_3307459_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319912
NZ_CP040336.1\|WP_156576044.1\|3289638_3290574_-\|tagatose-6-phosphate-kinase	unknown	unknown	gnl\|CDD\|237405
NZ_CP040336.1\|WP_167520157.1\|3294004_3294172_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP040336.1\|WP_098224467.1\|3288615_3289623_-\|tagatose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|183502
NZ_CP040336.1\|WP_001044590.1\|3297350_3298241_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP040336.1\|WP_156576045.1\|3290600_3291749_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434

Protein	Function_ID	Function_description	E-value
NZ_CP040336.1\|WP_156576043.1\|3283744_3288118_-\|endo-alpha-N-acetylgalactosaminidase	gnl\|CDD\|372376	pfam12905, Glyco_hydro_101, Endo-alpha-N-acetylgalactosaminidase. Virulence of pathogenic organisms such as the Gram-positive Streptococcus pneumoniae is largely determined by the ability to degrade host glycoproteins and to metabolize the resultant carbohydrates. This family is the enzymatic region, EC:3.2.1.97, of the cell surface proteins that specifically cleave Gal-beta-1,3-GalNAc-alpha-Ser/Thr (T-antigen, galacto-N-biose), the core 1 type O-linked glycan common to mucin glycoproteins. This reaction is exemplified by the S. pneumoniae protein Endo-alpha-N-acetylgalactosaminidase, where Asp764 is the catalytic nucleophile-base and Glu796 the catalytic proton donor.	3.71816e-129
NZ_CP040336.1\|WP_156576042.1\|3281838_3283323_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl\|CDD\|235382	PRK05270, PRK05270, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0
NZ_CP040336.1\|WP_128854967.1\|3299833_3300694_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.83787e-28
NZ_CP040336.1\|WP_156576051.1\|3301727_3302831_+\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	0
NZ_CP040336.1\|WP_156576052.1\|3302942_3303563_-\|DUF1775-domain-containing-protein	gnl\|CDD\|226922	COG4549, COG4549, Uncharacterized protein conserved in bacteria [Function unknown].	3.07254e-39
NZ_CP040336.1\|WP_156576041.1\|3280830_3281262_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.34409e-29
NZ_CP040336.1\|WP_156576048.1\|3294161_3296333_-\|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase	gnl\|CDD\|213701	TIGR02336, hypothetical_protein_BL1641, 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase. Members of this family are found in phylogenetically diverse bacteria, including Clostridium perfringens (in the Firmicutes), Bifidobacterium longum and Propionibacterium acnes (in the Actinobacteria), and Vibrio vulnificus (in the Proteobacteria), most of which occur as mammalian pathogens or commensals. The nominal activity, 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC 2.4.1.211), varies somewhat from instance to instance in relative rates for closely related substrates. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP040336.1\|WP_156576054.1\|3305666_3306668_-\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	3.41779e-27
NZ_CP040336.1\|WP_156576055.1\|3307545_3308904_-\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	8.42933e-176
NZ_CP040336.1\|WP_156576046.1\|3291769_3292936_-\|SIS-domain-containing-protein	gnl\|CDD\|131862	TIGR02815, agaS_fam, putative sugar isomerase, AgaS family. Some members of this protein family are found in regions associated with N-acetyl-galactosamine and galactosamine untilization and are suggested to be isomerases.	2.92136e-138
NZ_CP040336.1\|WP_156576049.1\|3298318_3299662_-\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274815	TIGR03850, ABC_transporter_substrate-binding_protein, carbohydrate ABC transporter substrate-binding protein, CPR_0540 family. Members of this protein are the substrate-binding protein of a predicted carbohydrate transporter operon, together with permease subunits of ABC transporter homology families. This substrate-binding protein frequently co-occurs in genomes with a family of disaccharide phosphorylases, TIGR02336, suggesting that the molecule transported will include beta-D-galactopyranosyl-(1->3)-N-acetyl-D-glucosamine and related carbohydrates. Members of this family are sporadically strain by strain, often in species with a human host association, including Propionibacterium acnes and Clostridium perfringens, and Bacillus cereus. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP040336.1\|WP_156576053.1\|3303598_3305248_-\|copper-resistance-protein	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	1.12218e-44
NZ_CP040336.1\|WP_156576047.1\|3292997_3293897_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	7.7567e-46
NZ_CP040336.1\|WP_071712472.1\|3307039_3307459_-\|VOC-family-protein	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	2.16182e-47
NZ_CP040336.1\|WP_156576044.1\|3289638_3290574_-\|tagatose-6-phosphate-kinase	gnl\|CDD\|237405	PRK13508, PRK13508, tagatose-6-phosphate kinase; Provisional.	1.07468e-142
NZ_CP040336.1\|WP_156576050.1\|3300762_3301626_+\|Fis-family-transcriptional-regulator	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	5.16977e-19
NZ_CP040336.1\|WP_098224467.1\|3288615_3289623_-\|tagatose-bisphosphate-aldolase	gnl\|CDD\|183502	PRK12399, PRK12399, tagatose 1,6-diphosphate aldolase; Reviewed.	0
NZ_CP040336.1\|WP_001044590.1\|3297350_3298241_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.84194e-69
NZ_CP040336.1\|WP_156576045.1\|3290600_3291749_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	4.70734e-159

>NZ_CP040336.1|WP_156576048.1|3294161_3296333_-|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase
MKKKTGRVTLPSEENFLKETKELMQRWGADAIRDSDGTKLDDDIKQLDAKIYTTYFVARAHNEFAEKHMDECQQLYLMSLFNTAITDTLEIDFMKGYFEEQLKPDYLNSPKKYWEIIDRTTGEVVDVNDWEVNEEKNSVLITKAIPWHEYTVSFLVYAIWDPTQMYNHITNDWGDKPHDIPFDVRQPHSNEFMKTYLKQWLAENPDTDVVRFTTFFYHFTLVFNNLGKEKFVDWFGYGASVSVAALEAFEQEKGYRLRPEDIVDQGYYNTSFRIPTPAFLDYMDFVHKFVAEEAKKLVDIVHDSGKEAMMFLGDNWIGTEPYGKYFENIGMDAVVGSVGGGATLRMIADIPHVRYTEGRFLPYFFPDTFYEGNNPVIEANENWLTARRALLRNPVDRIGYGGYLSLAYQFPEFVSYIEEVTEEFRGIYDTIKGVQPYSGLKVAILNSWGKLRTWQTHMVAHALWYKQIYSYLGVLESLSGAAVEVSFISFDDVINDGIPEGVDVIINAGDVGTAFSGGAHWINEKLVTTIRAWVYNGGGFIGIGEPTAHQHEGHYFQLANVLGVDKELGFSLSTDKYFITPVENHFISADSTQFDFGEGMKNIYALSDKTEIIEYSDGEVHLSSHSFGEGRSVYIAGLPYSEENTRLLMRALYYAAHKEGEFQTFHASNIYCEVHAYPSIQKMAIVNNSMSEQTTAVYDGQGNRKEVTLAPSEIRWEVFSNES
>NZ_CP040336.1|WP_167520157.1|3294004_3294172_-|hypothetical-protein
MKANALFIIKIVVFIVCLSLIIIYQKTAGKFELGMMLIGLAGLLGLLYDYNRKYV
>NZ_CP040336.1|WP_156576047.1|3292997_3293897_-|ROK-family-protein
MKKAVGIDIGGTKIAAGVISDTGVLLERAEVKSDPSDREKMFSRVVEAVEQVLRKSSISIANIEGIGVGVPGKVDRAKGIAIFQNNLPWRQFPITFRLQEQFGIERITIDNDVYMAAFAEWKAAQGKKDETFVYVTISTGISCSIIHKGSFFRGAGFAGELGLIPALSKGTNNRLEKVAAGPGIQRIAERDLQVDIISTKDVFAGYINGVQEYQSIINEVTDYLAQGLYTISCLLDPHKMIFGGSVIVKNPFLLELIKEKLKIYQLPEQQHLLDQMGISTLAQNNGVIGAGLRVFEDMY
>NZ_CP040336.1|WP_156576046.1|3291769_3292936_-|SIS-domain-containing-protein
MFTLSQENLVSLGASITTAEIKRQPDLWAETFALYMEKSGEIEGFFQKLLTKHSRIRVIFTGAGTSAYVGDTVTPYLKEKVDEQQWEMLSIPTTTLVSNPYQFFKKDFPTVLVSFARSGNSPESIAAVQLAEQIVTDLYQVTITCAKDGKLAKQAVGNEKNLLLLMPEKSNDQGFAMTGSYTCMALTALLVFDSLSNEEKSKIVKMIHQMGESVIQREDVIQEMIDFDFQRIIYLGSGSLEGLAREAQLKILELTAGKIVTAFDSPLGFRHGPKSFVNEKSLVFVFVSNHPYTRQYDLDMLKEMQQDNIASYICAIEVDGETNYAGNRFAFGKEAQSVPDAYLALPFVMIGQTVSLLASVKVGNTPDTPSPTGTVNRVVKGVTIYEYE
>NZ_CP040336.1|WP_156576045.1|3290600_3291749_-|N-acetylglucosamine-6-phosphate-deacetylase
MSIFIFADKFFLEGKVVGPGFLEIKDGKFGVFSENRPEEAAEIIDYAGCWIAPGLVDTHIHGFRNHDVMDNNFEGLNQISVGLLSCGVTSFLPTTLTSSVELLNHVVEMIGANYTKVQGAKIKGIFLEGPFFTEKHKGAQNTKYFCDPSVDMLKDWQELSNDSIKKIAIAPERKGAVEFIEYAAREDIVVALAHGDATYEEAKQAVEKGASIFVHTFNGMSPLHHREPGMVGAAMNLKDVFVEIICDGHHVHPVASNILMNVRGRENVVMVSDCMMAGGMSEGTYQLGEFPVKVKDGMARLENGSLAGSILQLKDAVKNVVVWGIAAPEEAIYMASTAPAKSIQLDSECGKIAEGYAADFIVLTPAMDLAATYLDGVCRFQA
>NZ_CP040336.1|WP_156576044.1|3289638_3290574_-|tagatose-6-phosphate-kinase
MILSVTMNPSVDISYSIHELKLDVVNRVETVHKTAGGKGLNVARVIAQMEEVVLATGVLGGTIGEYIIQELNRGDIPNDFLKIKKESRNCIAILHEGMQTEILESGPTLSKEEGATFLEKFECLLTTASLVTISGSLPKGLPNNFYYQMLELCNINGIPVIMDSSGESLENALVHKEKPFAIKPNAAELSQLLGINMGVGIVDLKQALHHELFTGIEWIIVSMGGEGAFVKHGEDYYRVTIPKIEVVNPVGSGDATVAGLAVALHQNQTVETVLKTAMTTGMLNTMEAETGYINVNKFKQYFDLVNVEKID
>NZ_CP040336.1|WP_098224467.1|3288615_3289623_-|tagatose-bisphosphate-aldolase
MLELTKNKLEALKRLSAENGIIGALAIDQRGSLKKMIASGGASHVGDEGIIRFKELVSEELTPFATAILLDPEYGLPAAKVRDKESGLIVAYEKTGYDASEVGRLPDLLSEWSVKRLKAAGADAIKFLLYYDFDEDEKINNYKHVYMERIGSECAAEDIPFFLEIVTYDAENDDAKSKAYAKIKPHKVIEAMKEFSKPQYQVDVLKVEVPVDMNFVEGYTAGEFVYRKEEAASFFKEQSEVTELPFIFLSAGVSAKLFQETLKFAKESGSTFNGVLCGRATWKDGVAPFAISGEQAGRDWLKDTGKRNAEELNLVLKETANSWFAKVKQTAELQS
>NZ_CP040336.1|WP_156576043.1|3283744_3288118_-|endo-alpha-N-acetylgalactosaminidase
MENKHFKRAFNTLLALMLIVPTFLVSMIVPLHVGANTSNPWVTISSGGNEINALVEQNGKSYARLGAGAGNDNGAKAAIFQEQNKVAKESGTMEYSFIPETKGEDTRFGFYPHYIDNNNFVFVGYDSLGWFYEYKYQGKGDWLKTRPNVPLPEAGTSHSIKINYNKTTLNITLDGKDLFGPVTLSNDVNNLLTGKEAIKLGAYGDKNSQVLIELGNTPGDGGTDPGNEKLVDITDNKLEEGDLKIISGDGNVTYNEDGSATFRVTSTQKNRIVYNQMKAIKNGVFEADVTTNTDKMNRFGLIYRVQNPSTYTYVGTGDTNDQYFGETFGPINNWTAMTSNVPLKAKQTYNLRLVFMDDVATLYIDGKKVDSWTLTGGVDQAGLLGFEKSRGAADITISNVKIKEYSAPKPPDTPPVEDTLKSKYMDVTIDQVFPRIVKYKVGDKVMSGQEAPVYGLKVNGGLYYPKVNFEKLNDSEALYTLKVVDEMKNLDAVFKVSLKVNDNKVVYSFDEIKNNGSAKIETVEFADMNFISVNSEQKGAKAKLTNISTDVRKTGDVDVKVDSSMEEIGTSTKNYTAFLSTDELSAGVWSSSEVDGYKNLVANRYVNKNGAKVMGIGSSALYYQRDFMPEPQKNKPTIKIAIAKDLNNDNKADWQDAAIAYRDIMQDIKGYQDVNNNVGMRIAMNFGSQAQQPFLKTSDNVKKVALATDELGQAVILKGYANEGHDSGHPDYGDVGERMGGVKDLNTLIKEGRKYNTQFGVHINAQETYPEAKAFNNDFIDRPSSLGWGWLDQSYTINKLKDLYSGSRAKRLDELKTAAPDLDFIYLDVWYQNQWESNRIADQFKDRGWRLTTEFGGSMANYSTWQHWATDKNYGGPESKGINSEVLRFISNHQRDSWVLNWPEVGGTADHPLLGGFELAGFEGWQSDKNFDNFIRMTFDTNLPTKFLQKYYVTNWTDVEGDKSKTNLEKEIKLKDPSNGDVVDVTRKDNARERVIKLNGNVILDGKAYLIPWVKQDFKNPTSDSEKLYHWNLEGGTTTWTLPDEYKGASTVYVYKLTDRGRTDVKEVKVVNNKVTLTASAATPYVVVPKKDKGLEILDYDWSKGAHIYDAGFNTGKVSAYTTIEGDNKAVSVVRTNQTGSNRNLSSGDYYLNIDSPSKDTTVSRVLTGLEPGKDYVAEVYVENNSDVKAGITVTGGKEDASNYTLRSLQKNYVKADSHATNDGYNSKMQIMQVSFTAVTNKAKLTLSRDSGKGNTKFDDVRIVQKSLKNNVSPTEFKQDFETVVQGIYPFVIGNTEGVEDNRIHLSELHAPYTQKGWAGKKLVDDVLGGNWSVKVNTGNKGLLYRTIPQNYRFESGVTYKVSFDYQTTANAYRFISGDQEIDVRDIASAKGLSVNNTLNASTDTKTVEFTVTGSENGQTYVGIFSDGTSLNGDTGAGTFILDNLRIEKLASGAEAH
>NZ_CP040336.1|WP_156576042.1|3281838_3283323_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MIYQTIQQLIDRAIEAKLIEREDEIYVRNKILSLLRLDDFVVEVSASVKKEIPELLEELIEYACTHEIIKKVFDEKEILASVIMDVFMSKPSAINALFYEKYEQDPMTATDYFYELSKNSNYIQMKQIAQNINYKVKTEYGAIDITINLSKPEKNPEQIMREKALESKNYPKCLLCIENEGYMGRIGHPARSNHRMVHMNLANERWFLQYSPYIYYNEHCIVLSAEHRNMKIDRQTFMRLLKFVERFPHYFLGSNADLPIVGGSILTHDHYQGGKYEFAMEKALNDFDFELADFSGIQCSIVKWPMSVIRLRSEDLEQLVNTGEYILGRWKGYSDSSVNIYAFTNGVSHNTITPIARYRNGMYELDLVLRNNRISEEHPLGIFHPHEDVQHIKKENIGLIEVMGLAVLPARLKTELQEVKKFLLDIPCDIPAYHILWAEQLKLQYGNRINEQNVQEIVREAVGQKFVQVLEDAGVFKRDEEGISAFKRFIQTLK
>NZ_CP040336.1|WP_156576041.1|3280830_3281262_-|Rrf2-family-transcriptional-regulator
MKISSRFSIAVHILSILKNNPSSLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRGPGGAGLLKDLHEITLLDVYHAVNVVEEDKLFHIHEQPNPDCPIGANIQVVLEVILIQAQAAMEEVLRNITMAQLFESLQEKMNA
>NZ_CP040336.1|WP_001044590.1|3297350_3298241_-|sugar-ABC-transporter-permease
MNKTTEKRIFIFVSTAPALILLAIFMIVPTIEVFRMSLYKWGGFSNNKVFVGLDNFKILWNDMNFFRSLQNSIVLIVIVTLITMVLAILFATLLTREKIKGKSLFRIIFYIPNILSVVVISGIFSAVYDPTTGLLNNLLALFNLENLQKMWLGNQKIAIYSIGGALIWQAVGYYMVMYMAAMASIPESFYEASSLEGAGRIRQFFSITLPLIWNNMRTTLTFFVISTINLSFLLVQAMTGGGPDGSTEVFLSYMYKQAYTNSSYGYGMAIGVVIFLFSFALSAIISRVTKREVLEY
>NZ_CP040336.1|WP_156576049.1|3298318_3299662_-|carbohydrate-ABC-transporter-substrate-binding-protein
MKKKFLLSGMTALLSLSLIACQGNTTKVDNSTGGKGSSKKQTLHVATLESAYGKEMWTKVIEAYEAANPKVDVELTVDKNLEDVIGSNMKAGNYPDVVLLATGRKQALTETLIKDKALEDITDVFDKNVYGEDVKVKDKLVPGLTGTPATNPYNDGKTYMAPMFYSPTGLFYNASLFKEKGWEVPKTWDEMWALGDKAKAEGISLFTYPTTGYFDTFFYSLLLGVGGPELYNKAMKYGDGVWETSEATKAFEIIGKLGKYTEPTTVANANDKDYKKNQQLILDNKALFMPNGTWVVGEMKEAPRSKGFEWGMMALPTIDANSDRYAFTFFEQMWIPSAAKNKQAAKDFMTFVYSDKAVEIFAESSAIQPIKGLSNKLTGENKSFYSIYDNGVKVGVGGFAATKAVEGVSMPDTLFRSIDSVISGDKKVKDWQSSVEKVSDQLRSALK
>NZ_CP040336.1|WP_128854967.1|3299833_3300694_+|AraC-family-transcriptional-regulator
MSNEVYEIPQSQRGHLPVKLLYVTKSKYDKDWHSTNHAHHFTELLYITKGKGTFIFYKEEVPVKEHDLIIINPNVEHTEKSDTDHPLEYIALGIQGLSFSSTENPGQITIYNYKQEKNTFLFYLEQLLEEAENHQEDYELIMQDILEILLLKMMRKKAFNVEKTSTQKINKDIEFIKNYIKQHFRENISLDTLAKVSHINKYYLAHSFRKFAGVSPIEYLIQIRIRESKLLLETTNYPISNISTITGFSSQSFFSQSFKRETKLSPSQYRNTINSNKNKTDFNAKN
>NZ_CP040336.1|WP_156576050.1|3300762_3301626_+|Fis-family-transcriptional-regulator
MIQKLKAYYGEDIKINEAVLSEDYSWFLVEEHKIGIRKTRLHKKEHLLLSSILTPIHTDTFYETEKEKSWYAVLYKNKYTPIVSVRFLHFFTTRPIVEREEFQYALQSMFPFTTTTIWETSQTGALILEENIPESVLQAALDTLETDFFISLSFFMGRHYTQTNEIARLYQWERNLFYVLSPYLSQKIIHIEQLLPYQLMISLPKEERAKYTNQLLAPISNNKELIDSVKVFFQCNLNVSLAAKQLYLHRNTLQYRIDKFIEKTGINIKTFEGAVTVYMAFLSLDIS
>NZ_CP040336.1|WP_156576051.1|3301727_3302831_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MTELVLDHIFKVYDNKTTAVSDFNLHIEDKEFIVFVGPSGCGKSTTLRMIAGLEDISDGSFYIDGVRMNDVAPKDRNIAMVFQNYALYPHMSVYENMAFGLKLRKLPKAEIDHRVNEAAKILGLEDYLKRKPKALSGGQRQRVALGRAIVRDAKIFLMDEPLSNLDAKLRVSMRSEISKLHRRLNTTTIYVTHDQTEAMTMASRLVVMKDGLIQQIGTPKEVYDNPENIFVGGFIGSPAMNFFTGTLQDKYFNIENIRFKVPDGLLKTLNKQGYNGKSIILGIRPEDIHDEPIVLQASPESTVEITVEVAELLGAETMIHGKLANQNFIARINARSEIKATDKIPLAFSLTKAHFFDIDTEQRIRNN
>NZ_CP040336.1|WP_156576052.1|3302942_3303563_-|DUF1775-domain-containing-protein
MKRIKKLGTTMIATIIAMGIFSLPVSAHVTVKPATSDVNSWETYTIKVPVEKNVATTKVTLKIPAGVEFQQYEPVPGWKVEEKKDTDGKVKTVVWEATGEGILPGQFQRFTFVAKNPNKEQKIAWDAYQQYTDGEIVEWTGDEKAEKPHSLTAITKGTSLTGEHGEVSSIEKNESTSNMTTIAIVLSILAIVSSVGMCVFVGRRKK
>NZ_CP040336.1|WP_156576053.1|3303598_3305248_-|copper-resistance-protein
MSVKVMKRLGAWLLIACVCIILIPKSVSAHAYVVKSNPTENETLKKAPSVVKIEFDEDIQVSRFNTLFVRDSSGKRVDLKDAHIDKRNKKILEAGLKENLKNGLYSIQWKAISADGHPIQGVIPFRVGLAEAGADDVQVEEMGYVPQIDMIMERGILYTSFSLFLGVLFFNLVMYKGSAALVRLKSKKIIWISLLGIFISLLFNLPLQAKMNADVSWLEAFDPFLLKETLQLSVFGYVWITQMALISTLILVTYFAVKREKLSSFKVWSIPILLFTGLLVMKALNSHAYGLKFKGIAVVMDFLHLFAASLWIGGLSSIILLLRKEDDKWTKYWDAIKRFSPWATGAVIVIVITGLFNSTFFIPTIHSLFDTKYGLALLAKILLFVCMGILGIVHYVKGRMRAQQRLGATVKVEFIIGIIVFIIVAFMTNVQTPPMPPTGPFTESKQLNNGYELTLQVSPNKVGQNIFHITLKDENGQPITDMEQIVLTTQSLDMNMGKGSFKASAVSPGEYEAEGMYINMTGNWNIHVHGLTKSLDSFDTDYKFIVGGR
>NZ_CP040336.1|WP_156576054.1|3305666_3306668_-|glycosyltransferase
MGSSHGAEDFNVLFVTSSVPVYFPVLEEAIYNSLKKAVGTVTMVTYENLVKTALKIKPSLIIVFHGFEKGISKGIQQLKQYNFKTALWLTDDPYFTDVTKYLVLDYDYIFTQDTGCIDFYKNLGCENVFYLPLAADPPIYTPLLREEEYLFDISFIGTAFENRLAFIDSISEYLVTKNTLIIGCNWDKLKSYELLKDKIVLLPFLMYENNVEYYKKSKININIHRSIEDVTFNRNRVKINACSVNNRTFEIASTGSFQITDIRADLEKCYIPGVQIETFTSSIDFIEKAEKYLTNPAQRNKIAMAGFKRTLTEHTYDKRVKQLLEIIEMNHKN
>NZ_CP040336.1|WP_071712472.1|3307039_3307459_-|VOC-family-protein
MKKTIDHIGIAVRDIDSTIRFYETVLAGTLIDRYISEAPGVESEVAILEVDGDRVELLAPTNNTTSPIARFIKQKGKGVHHVAYRVDDLDVALEELKEQGIRTLEHTLRINKHGRRLIYLNPADTEGTIIEYCDYPEEK
>NZ_CP040336.1|WP_156576055.1|3307545_3308904_-|branched-chain-amino-acid-transport-system-II-carrier-protein
MTNKVPFSFIVVIGLMLFALFFGAGNLIFPAMLGQSAGENVWIANAGFLVTGVGLPLLGVLAFGFSGKDDLQSLASRAHPVFGIVFTTVLYLAIGPLFAIPRTGNVSYEIGLKPFIPEGLGSTSLILFTIVFFSITCFFSLNPAKIVDIVGKILTPIKLTFIGILVIVAFIHPIGDMQAPVEAYTSHAFFKGFQEGYLTMDTLASFVFGIIIINAIKEKGAKTKTQIMVVCAKATIIAASILAIIYTALSYMGASSVAKLGHLENGGEVLAKVSNYYFGSYGGVLLGLMITVACLTTSVGLVSACSSFFHKLFPNVPYKAIAIMLCVFSAIVANVGLTQLIAVSVPVLTAIYPLAIVLIFLTFFHSLFKGRAEVYQVSLIVTFIISLFDGLSTAGVNIEVVNQVFTKLLPMQEVGLGWIFPAIIGGFIGYGISVLKAKNQVQPAANANKKIS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP040336_2	2.2\|3297289\|26\|NZ_CP040336\|CRISPRCasFinder	3297289-3297314	26	MN694375	Marine virus AFVG_250M985, complete genome	24706-24731	4	0.846
NZ_CP040336_2	2.2\|3297289\|26\|NZ_CP040336\|CRISPRCasFinder	3297289-3297314	26	MN693660	Marine virus AFVG_250M778, complete genome	15530-15555	4	0.846
NZ_CP040336_2	2.2\|3297289\|26\|NZ_CP040336\|CRISPRCasFinder	3297289-3297314	26	MN694123	Marine virus AFVG_250M986, complete genome	15421-15446	4	0.846
NZ_CP040336_2	2.2\|3297289\|26\|NZ_CP040336\|CRISPRCasFinder	3297289-3297314	26	MN693659	Marine virus AFVG_250M987, complete genome	15432-15457	4	0.846
NZ_CP040336_2	2.1\|3297235\|26\|NZ_CP040336\|CRISPRCasFinder	3297235-3297260	26	NZ_CP022568	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence	268516-268541	6	0.769

1. spacer 2.2|3297289|26|NZ_CP040336|CRISPRCasFinder matches to MN694375 (Marine virus AFVG_250M985, complete genome) position: , mismatch: 4, identity: 0.846

cgatctggatatactgtttctgtctc	CRISPR spacer
cgaactggatatactgttcctgttcc	Protospacer
*** **************.****..*

2. spacer 2.2|3297289|26|NZ_CP040336|CRISPRCasFinder matches to MN693660 (Marine virus AFVG_250M778, complete genome) position: , mismatch: 4, identity: 0.846

cgatctggatatactgtttctgtctc	CRISPR spacer
cgaactggatatactgttcctgttcc	Protospacer
*** **************.****..*

3. spacer 2.2|3297289|26|NZ_CP040336|CRISPRCasFinder matches to MN694123 (Marine virus AFVG_250M986, complete genome) position: , mismatch: 4, identity: 0.846

cgatctggatatactgtttctgtctc	CRISPR spacer
cgaactggatatactgttcctgttcc	Protospacer
*** **************.****..*

4. spacer 2.2|3297289|26|NZ_CP040336|CRISPRCasFinder matches to MN693659 (Marine virus AFVG_250M987, complete genome) position: , mismatch: 4, identity: 0.846

cgatctggatatactgtttctgtctc	CRISPR spacer
cgaactggatatactgttcctgttcc	Protospacer
*** **************.****..*

5. spacer 2.1|3297235|26|NZ_CP040336|CRISPRCasFinder matches to NZ_CP022568 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK04, complete sequence) position: , mismatch: 6, identity: 0.769

ggcccttgatacgctttttctgcagt	CRISPR spacer
acgtcttgatacgcttttcctgcagg	Protospacer
.  .**************.******

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

826679 : 834316

uncultured_Caudovirales_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156573829.1\|826679_827612_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	3.4e-16	27.6
WP_000403752.1\|827601_828372_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-13	26.1
WP_071710422.1\|828404_829169_+	class B sortase	NA	NA	NA	NA
WP_156573832.1\|829237_829561_-	heme oxygenase	NA	NA	NA	NA
WP_071710424.1\|829860_831060_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	9.5e-72	41.0
WP_001014310.1\|831099_831294_-	YwbE family protein	NA	NA	NA	NA
WP_001293578.1\|831294_831468_-	hypothetical protein	NA	NA	NA	NA
WP_156573834.1\|831637_832330_+	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	1.4e-06	28.8
WP_156573836.1\|832331_833267_+	HAMP domain-containing histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	1.9e-11	25.5
WP_156573838.1\|833392_834316_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	5.3e-46	44.0

DBSCAN-SWA_2

889628 : 957556

Klosneuvirus(22.22%)

integrase,tRNA,coat,protease

attL 909776:909796|attR 937490:937510

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000472280.1\|889628_890888_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.5e-149	66.1
WP_033665543.1\|890994_892665_+\|protease	ATP-dependent protease LonB	E3T4F6	Cafeteria_roenbergensis_virus	9.6e-14	32.8
WP_156573883.1\|892848_895179_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.0e-178	43.9
WP_000869114.1\|895175_895772_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
WP_000359771.1\|895804_896221_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_071713328.1\|896223_896676_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000547871.1\|897091_898429_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_071713327.1\|898446_899280_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_001226415.1\|899295_900225_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_156573885.1\|900227_900980_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_001087076.1\|901000_901990_+	porphobilinogen synthase	NA	NA	NA	NA
WP_071713325.1\|901989_903279_+	glutamate-1-semialdehyde 2,1-aminomutase	A0A1V0SKB7	Klosneuvirus	2.8e-05	34.1
WP_156573887.1\|903363_904371_+	stage VI sporulation protein D	NA	NA	NA	NA
WP_156573889.1\|904430_905456_+\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_156573892.1\|905851_908497_+\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.5e-165	43.3
WP_156573894.1\|908588_909890_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
909776:909796	attL	NA	NA	NA	NA
WP_156573896.1\|910054_911014_+	stage II sporulation protein B	NA	NA	NA	NA
WP_001226283.1\|911234_911810_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_156573898.1\|911856_912408_+	DNA repair protein RadC	NA	NA	NA	NA
WP_061535636.1\|912961_913531_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_061535635.1\|913549_915142_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	4.9e-124	50.3
WP_061535634.1\|915131_916388_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	1.9e-59	35.4
WP_061535633.1\|916410_919563_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_061535632.1\|919639_921142_+	hypothetical protein	NA	NA	NA	NA
WP_156573900.1\|921160_921781_+	molecular chaperone Tir	NA	NA	NA	NA
WP_061535629.1\|923907_924606_-	hypothetical protein	NA	NA	NA	NA
WP_061535628.1\|924598_926314_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_156576914.1\|926322_929613_-	hypothetical protein	NA	NA	NA	NA
WP_061535627.1\|929572_930922_-	hypothetical protein	NA	NA	NA	NA
WP_000466737.1\|931428_932448_+	rod shape-determining protein MreB	NA	NA	NA	NA
WP_001135469.1\|932489_933341_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_071713319.1\|933355_933901_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_000391524.1\|933936_934623_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_071713318.1\|934625_935423_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_000797470.1\|935556_936303_+	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA
WP_000599062.1\|936295_937156_+	stage IV sporulation protein SpoIVFB	NA	NA	NA	NA
WP_098662578.1\|937223_938612_+	Rne/Rng family ribonuclease	NA	NA	NA	NA
937490:937510	attR	NA	NA	NA	NA
WP_000270907.1\|938781_939090_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_001993153.1\|939101_939446_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_000944957.1\|939449_939740_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_071713316.1\|939803_940352_+	sporulation protein	NA	NA	NA	NA
WP_000497124.1\|940351_941638_+	GTPase ObgE	NA	NA	NA	NA
WP_156573903.1\|941777_942485_+	response regulator transcription factor	NA	NA	NA	NA
WP_156576915.1\|942474_943557_+	sensor histidine kinase	NA	NA	NA	NA
WP_000114530.1\|943650_944427_+	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-19	31.0
WP_156573905.1\|944401_946324_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_156573908.1\|946373_948287_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_071713311.1\|948383_949235_+	prephenate dehydratase	NA	NA	NA	NA
WP_156573910.1\|949320_949968_-	MOSC domain-containing protein	NA	NA	NA	NA
WP_000812275.1\|950047_950590_-	transcription repressor NadR	NA	NA	NA	NA
WP_156573912.1\|950589_951732_-	IscS subfamily cysteine desulfurase	A0A1X7QGF3	Faustovirus	2.0e-31	30.1
WP_156573914.1\|951884_953414_+	L-aspartate oxidase	NA	NA	NA	NA
WP_071713307.1\|953433_954267_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_071713306.1\|954297_955404_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_156573917.1\|955630_957556_+\|coat	spore coat assembly protein ExsA	NA	NA	NA	NA

DBSCAN-SWA_3

3230126 : 3239476

Bacillus_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156576018.1\|3230126_3230999_-	aminoglycoside 6-adenylyltransferase	E4ZFP8	Streptococcus_phage	2.1e-65	44.4
WP_156576019.1\|3231131_3231803_-	methyltransferase	W8CYT3	Bacillus_phage	1.1e-61	88.3
WP_156576020.1\|3231950_3232670_-	3-ketoacyl-ACP reductase	W8CYX9	Bacillus_phage	2.9e-60	99.2
WP_156576021.1\|3232869_3233454_+	DUF3139 domain-containing protein	NA	NA	NA	NA
WP_156576022.1\|3233478_3234552_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	1.2e-174	90.8
WP_156576023.1\|3234548_3235235_-	response regulator transcription factor	W8CYM9	Bacillus_phage	9.7e-122	95.6
WP_156576024.1\|3235314_3237075_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	6.5e-271	96.5
WP_001194288.1\|3237314_3238079_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_156576025.1\|3238177_3239476_-	SH3 domain-containing protein	A0A1V0DZX6	Clostridioides_phage	2.3e-10	37.5

DBSCAN-SWA_4

4804062 : 4812433

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016089553.1\|4804062_4804650_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.7e-27	36.4
WP_071710558.1\|4804646_4805687_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.6e-67	45.6
WP_042981527.1\|4805787_4807203_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.3e-55	35.4
WP_156576798.1\|4807187_4809407_-	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	2.6e-163	41.2
WP_000666780.1\|4809390_4810074_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000278823.1\|4810070_4810325_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001170544.1\|4810317_4811037_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.0e-49	44.3
WP_000625682.1\|4811125_4812433_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.9e-21	25.3

DBSCAN-SWA_5

4853317 : 4861266

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_071710573.1\|4853317_4854823_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.2e-32	30.0
WP_156576808.1\|4854806_4855508_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.5e-40	36.9
WP_156576809.1\|4855652_4856978_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.1e-44	30.2
WP_165613787.1\|4857360_4858902_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.0e-21	31.2
WP_071710570.1\|4859305_4860943_-	chaperonin GroEL	A0A219YK78	uncultured_virus	2.6e-157	58.3
WP_000917307.1\|4860981_4861266_-	co-chaperone GroES	A0A221S3C8	uncultured_virus	1.3e-19	52.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040336

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection