CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046557	Leclercia sp. 1106151 chromosome, complete genome	2 crisprs	WYL,csa3,DEDDh,DinG,cas3	0	1	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046557_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046557_1

1286541-1286635

Orphan

Consensus_repeat	Method
TAGGCCGGGTAAGGCGTTGCCGCCACCCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046557_1

>merge|NZ_CP046557|1|1286541-1286635|CRISPRCasFinder
TAGGCCGGGTAAGGCGTTGCCGCCACCCGGCATTGAGGCACAGTTTCAGACCGCAGTGGTTTTGTAGGCCGGGTAAGGCGTAGCCGCCACCCGGC

>NZ_CP046557|1|1|1286541-1286635|CRISPRCasFinder
TAGGCCGGGTAAGGCGTTGCCGCCACCCGGC	ATTGAGGCACAGTTTCAGACCGCAGTGGTTTTG
TAGGCCGGGTAAGGCGTAGCCGCCACCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046557.1\|WP_156654070.1\|1282614_1286481_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	unknown	unknown	gnl\|CDD\|236668
NZ_CP046557.1\|WP_156654067.1\|1273324_1275472_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP046557.1\|WP_156654073.1\|1289537_1290773_+\|enterobactin-transporter-EntS	unknown	unknown	gnl\|CDD\|236700
NZ_CP046557.1\|WP_103178619.1\|1278693_1280934_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|237410
NZ_CP046557.1\|WP_103178631.1\|1294895_1295750_+\|isochorismatase	unknown	unknown	gnl\|CDD\|224452
NZ_CP046557.1\|WP_156654064.1\|1267766_1269917_+\|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl\|CDD\|130652
NZ_CP046557.1\|WP_156654076.1\|1296499_1296913_+\|proofreading-thioesterase-EntH	unknown	unknown	gnl\|CDD\|182337
NZ_CP046557.1\|WP_156655439.1\|1295752_1296499_+\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	unknown	unknown	gnl\|CDD\|236190
NZ_CP046557.1\|WP_156654072.1\|1288421_1289426_-\|Fe(3+)-siderophore-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182464
NZ_CP046557.1\|WP_156654071.1\|1287432_1288422_-\|iron-enterobactin-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|182463
NZ_CP046557.1\|WP_103178623.1\|1286641_1287436_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|182336
NZ_CP046557.1\|WP_103178630.1\|1293285_1294884_+\|(2,3-dihydroxybenzoyl)adenylate-synthase	unknown	unknown	gnl\|CDD\|236803
NZ_CP046557.1\|WP_156654066.1\|1272154_1273174_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	unknown	unknown	gnl\|CDD\|225911
NZ_CP046557.1\|WP_156654065.1\|1269917_1272140_+\|carbamoyltransferase-HypF	unknown	unknown	gnl\|CDD\|223146
NZ_CP046557.1\|WP_103178621.1\|1282405_1282618_+\|MbtH-family-NRPS-accessory-protein	unknown	unknown	gnl\|CDD\|225790
NZ_CP046557.1\|WP_156654075.1\|1292100_1293276_+\|isochorismate-synthase-EntC	unknown	unknown	gnl\|CDD\|184977
NZ_CP046557.1\|WP_156654068.1\|1277788_1278250_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046557.1\|WP_156654069.1\|1281188_1282391_+\|enterochelin-esterase	unknown	unknown	gnl\|CDD\|236695
NZ_CP046557.1\|WP_156654074.1\|1290953_1291913_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|236806
NZ_CP046557.1\|WP_156654063.1\|1267183_1267729_+\|electron-transport-protein-HydN	unknown	unknown	gnl\|CDD\|182382

Protein	Function_ID	Function_description	E-value
NZ_CP046557.1\|WP_156654070.1\|1282614_1286481_+\|enterobactin-non-ribosomal-peptide-synthetase-EntF	gnl\|CDD\|236668	PRK10252, entF, enterobactin non-ribosomal peptide synthetase EntF.	0
NZ_CP046557.1\|WP_156654067.1\|1273324_1275472_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP046557.1\|WP_156654073.1\|1289537_1290773_+\|enterobactin-transporter-EntS	gnl\|CDD\|236700	PRK10489, PRK10489, enterobactin transporter EntS.	0
NZ_CP046557.1\|WP_103178619.1\|1278693_1280934_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|237410	PRK13524, PRK13524, FepA family TonB-dependent siderophore receptor.	0
NZ_CP046557.1\|WP_103178631.1\|1294895_1295750_+\|isochorismatase	gnl\|CDD\|224452	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism].	4.62741e-132
NZ_CP046557.1\|WP_156654064.1\|1267766_1269917_+\|formate-dehydrogenase-subunit-alpha	gnl\|CDD\|130652	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type. This model describes a subset of formate dehydrogenase alpha chains found mainly archaea but also in alpha and gamma proteobacteria and a small number of gram positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase (pfam01568 and pfam00384, respectively). The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized). This model is well-defined, with only a single fragmentary sequence falling between trusted and noise. The alpha subunit of a version of nitrate reductase is closely related.	0
NZ_CP046557.1\|WP_156654076.1\|1296499_1296913_+\|proofreading-thioesterase-EntH	gnl\|CDD\|182337	PRK10254, PRK10254, proofreading thioesterase EntH.	1.35977e-94
NZ_CP046557.1\|WP_156654066.1\|1272154_1273174_+\|HoxN/HupN/NixA-family-nickel/cobalt-transporter	gnl\|CDD\|225911	COG3376, HoxN, High-affinity nickel permease [Inorganic ion transport and metabolism].	1.06838e-141
NZ_CP046557.1\|WP_156654072.1\|1288421_1289426_-\|Fe(3+)-siderophore-ABC-transporter-permease	gnl\|CDD\|182464	PRK10441, PRK10441, Fe(3+)-siderophore ABC transporter permease.	1.2968e-174
NZ_CP046557.1\|WP_156655439.1\|1295752_1296499_+\|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase	gnl\|CDD\|236190	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated.	1.2044e-165
NZ_CP046557.1\|WP_103178623.1\|1286641_1287436_-\|iron-enterobactin-ABC-transporter-ATP-binding-protein	gnl\|CDD\|182336	PRK10253, PRK10253, iron-enterobactin ABC transporter ATP-binding protein.	0
NZ_CP046557.1\|WP_103178630.1\|1293285_1294884_+\|(2,3-dihydroxybenzoyl)adenylate-synthase	gnl\|CDD\|236803	PRK10946, entE, (2,3-dihydroxybenzoyl)adenylate synthase.	0
NZ_CP046557.1\|WP_156654071.1\|1287432_1288422_-\|iron-enterobactin-ABC-transporter-permease	gnl\|CDD\|182463	PRK10440, PRK10440, iron-enterobactin ABC transporter permease.	0
NZ_CP046557.1\|WP_156654065.1\|1269917_1272140_+\|carbamoyltransferase-HypF	gnl\|CDD\|223146	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP046557.1\|WP_103178621.1\|1282405_1282618_+\|MbtH-family-NRPS-accessory-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	1.24158e-26
NZ_CP046557.1\|WP_156654075.1\|1292100_1293276_+\|isochorismate-synthase-EntC	gnl\|CDD\|184977	PRK15016, PRK15016, isochorismate synthase EntC; Provisional.	0
NZ_CP046557.1\|WP_156654069.1\|1281188_1282391_+\|enterochelin-esterase	gnl\|CDD\|236695	PRK10439, PRK10439, enterobactin/ferric enterobactin esterase; Provisional.	0
NZ_CP046557.1\|WP_156654074.1\|1290953_1291913_-\|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein	gnl\|CDD\|236806	PRK10957, PRK10957, iron-enterobactin transporter periplasmic binding protein; Provisional.	0
NZ_CP046557.1\|WP_156654063.1\|1267183_1267729_+\|electron-transport-protein-HydN	gnl\|CDD\|182382	PRK10330, PRK10330, electron transport protein HydN.	9.577e-105

>NZ_CP046557.1|WP_156654070.1|1282614_1286481_+|enterobactin-non-ribosomal-peptide-synthetase-EntF
MSVKHPLVAAQPGIWMAEQLSDLPNAWSVAHYVELTGPVDAPLLAKAVVAGMMQADTLRMRFTEDNGEIGQWVDESATLPEPQIIDLRHHADPHAAALATLQADLNQNLRVDSGQPLAFHLLLQVADNRWYWYQRYHHLVVDGFSFPAITRQIAAIYRAWSKGEATPESPFTPFAEVVEEYQRYQQSDAYARDGAFWAEQRKQLPPPVSLSSAPLPGRAATTDILRLKLTADRQAFSQLANKSQSQRTDLALALVALWLARLTGRMSYAAGFIFMRRMGSAALTATGPVLNVLPLAVNINPQETLPELAQRLAGQMKKMRRHQRYDAEQIVRDSGRAASDEALFGPVFNVKVFDYQLDIDGVQAVTHTLATGPVNDLEMALFPDEQGGLSIEILANKQRYDEATLVRHVERLHELLAQFAANSDLRCGEAETVSDAEYQQLEKINQTAVPLPRTTLSGLVAEQAAKTPDAPALADAQYELTYRQMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEVGAAWLPLDTGYPDDRLQMMIEDAQPSLLITTDDQRPRFDHLPVATFSYNILLSAADARPLHLSRPEQTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTAADVVAQKTPCSFDVSVWEFWWPFIAGAKLVMAEPEAHRDPLAMQEFFGKYGVTTTHFVPSMLAAFVASLTPENVACCASLKQVFCSGEALPTALCREWEQLTQVPLHNLYGPTEAAVDVSWYPAYGPELAAVEGNSVPIGFPVWNTGLRILDGMMRPVPFGVAGDLYLTGIQLAQGYLGRPDLTASRFIAAPFAPGERMYRTGDVARWLDNGAVEYLGRSDDQLKIRGQRIELGEIDRAMLTLPDVAQAVTHACVINQAADTGGDARQLVGYVVSESGLPLDRDALLTALKAQLPPHMVPVVLLQLSDLPLSANGKLDRKALPLPELTVKAQGRPPQTDAEWTIAAAFSALLGCEVNDIEADFFALGGHSLLAMRLAASLSRHFARQVTPGQVMVAPTVGKLSALLASDISDEQAQRLGYETILPLRESHGPTLFCFHPASGFAWQFSVLARYLSPRWSIICIQSPRPGPMQNGATLDEVIEHHLATLRAQQPRGPYYLFGYSLGGTLAQGIAARLRAQGEEVAFLGLLDTWPPETQNWSEKEANGLDPEVLAEIERERQAFLAAQQGQASGELFSAIEGNYADAVRLLTTAHSSTFDGKATLFVAERTRTMDPHKAWAPWVGELEVYHQDCAHVEIISPQAFEHIGPVLKEILG
>NZ_CP046557.1|WP_103178621.1|1282405_1282618_+|MbtH-family-NRPS-accessory-protein
MEFSNPFDDPQGLFTIVQNAQNQYSLWPQQCALPDGWHVVCEAQSQEACQQWLAAHWQTLIPAHFAQVTP
>NZ_CP046557.1|WP_156654069.1|1281188_1282391_+|enterochelin-esterase
MTTLETGSDAWWQSKQGPDRVREGDHYRVTFCWRDPQGTEQTSPLKKVWLYITGVTDHHHNARPQTLERINGTDVWQWQGEFSPHWRGSYCFIPSERDDDFADAVFASDPPDRMALREGWRRLLPKAIADPRNPQHWRGGRGHPVSALEMPEAPLQPGWDRPDTPYQPAQCITWQSARLGNTRRVWIFPTGEASPNERPLAVLLDGQFWAESMPVWPALTALTLDGQLPPAVYVLIDVIDTDHRSRELPCNPDFWLAVQEELLPQVQALAPFSDRADRTVVAGQSFGGLSALYAGLHWPQRFGCVLSQSGSFWWPHRGGKHDGIIIEQLKNQQLSAQSLRIVLEAGRREPLIFRACQALYAELQHTQQPVIWRPVDGGHDALCWRGGLTQGLMTLWQPLI
>NZ_CP046557.1|WP_103178619.1|1278693_1280934_-|TonB-dependent-siderophore-receptor
MNNKLHSLTLLVNLGIYGVALPAMAAETAGHEDTMVITAAEQNLQAPGVSTITADEIRKNPSARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPENTLILIDGKPVTSRNSIRLGWRGERDTRGDTGWVPPEMIERIEVIRGPAAARYGNGAAGGVVNIITKKVSNEWHGSWNTYLNAPEHNEEGSTKRTNFSLSGPLSDAFSFRLYGNLDKTQADAWDINQGHQSERTGAYADTLPAGREGVENKDVNGVLRWEFAPMQALQFEAGYSRQNNLYAGDTQNTNNDNSSNGLVKKNYGKETNRIYRQNFALTWTGGWDNGITTNNWAQYEHTRNSRLGEGLAGGLEGLFNSDKFTDTDLSDVMLHSEINLPIDFIVNQNLTLGAEWDQQRMKDMSSNGQALQGGAIAGMSDNRSPYSDAEIFSLFAENNMELTDTTMLTPALRFDHHSIVGNNWSPSLNLSQGLGDDFTLKMGIARAYKAPSLYQTNPNYLLYSKGQGCYASADGVGCYMLGNEDLKAETSINKEIGLEWKRDGWLAGVTWFRNDYRDKIEAGYAPIGQTSAGRTRTDIYQWENVPKAVVEGLEGTLNVPVSDAINWTNNITYMLQSKNKETGDRLSIIPEYTLNSTLSWQVQQDVSLQSTFTWYGKQQPKKYNYKGQPATGSELDEVSPYSIVGLSATWDVTKYVSLTGGVDNVFDKRQWRAGNAQTTGNATTGAYMYGAGAYTYNEPGRTWFMSVNTRF
>NZ_CP046557.1|WP_156654068.1|1277788_1278250_+|hypothetical-protein
MATTPTPAQALFTVPFSHNTDFTVLANHCERFACTLLETDEPAEKLALCARLCACLALLQPTLNEPIPAHLVEHFTLNDLPSRLPAFEPESDQLGIYCQTVTQLLISNVLPPEMARVMEGLLYDLVSFYADTLNAPRWLQTPDGRVAFDVLID
>NZ_CP046557.1|WP_156654067.1|1273324_1275472_+|formate-dehydrogenase-subunit-alpha
MKKVVTVCPYCASGCKINLVVNNGKVVKAEAAQGKTNQGDLCLKGYYGWDFINDTKILTPRLKSPMIRRQRGGKLEAVSWDEALDYVASKLSAIKAAHGPDAIMTTGSSRGTGNETNYIMQKFARAAVGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNSIVGIEKADMVFIFGYNPADSHPIVANRVIKAKRNGAKIIVCDPRKIETARIADMHLALKNGSNIALLNAMGHVIIEEELYDRAFVAARTEGFEEYRKIVEGYTPESVEAITGVSAAEIRQAARMYAAAENAAILWGMGVTQFYQGVETVRSLTSLALLTGNLGKPYAGVNPVRGQNNVQGACDMGALPDTYPGYQYINNPENRAKFAKAWGVDSLPAHTGYRISELPHRVAHGEVRAAYIMGEDPLQTDAELSAVRKAFEGLELVIVQDIFMTKTAAAADVILPSTSWGEHEGVYTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHLCPDFYGATYEKMGELGYIQWPCRDESEADQGTDYLFEKEFSTPNGLGQLYTCDWVAPIDKLTEEYPLVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTADAARLGIEDEALVWVTSRKGKVITRAQVSDRPNKGAVYMTYQWWIGACNELVTENLSPITKTPEYKYCAVRVEPIADQQAAEQYVIDEYHKLKKHLRELAVG
>NZ_CP046557.1|WP_156654066.1|1272154_1273174_+|HoxN/HupN/NixA-family-nickel/cobalt-transporter
MYMKYFNNHPKALALMLALIATNILAWGLAFYLFHATPSLLAASLLAWCYGLRHAVDADHIAAIDNVTRKMMQQGKRPCGVGAWFSLGHSTIVVLASIAIAATATAFSRNMAWFHETGGTIGTAVSAFFLLAMALVNLVILRDVWGSFNKMKRGESVPETVSFARGGVMNWLFRSAFRLVTRSWHMYLVGFLFGLGFDTATEIGVLGISAAGASSGMSVWAIMVFPLLFTSGMALIDTLDNLIMVGAYGWAFNKPQRKLYYNMTITGTSVVVALFIGGLEALGLLADKLGLEGGLWNGVAALNDNLGNAGFIVVGLFVACWVISLINYRFKGYDALVVR
>NZ_CP046557.1|WP_156654065.1|1269917_1272140_+|carbamoyltransferase-HypF
MSTNGTRVRIRGKVQGVGFRPWVWQVAQQLGLRGDVCNDGAGVEVRLVGGAQAFIRQLAVGCPPLARIDDIQEQPWRWAQTPMDFTIRASAHSQMTTQVVPDAATCPACLAEMNDPRERRYRYPFINCTHCGPRFTIIRAMPYDRPATTMAGFALCPACEAEYRNPADRRFHAQPVACPDCGPQVSWVCGEAREEREAALKAAVLMLKQGGIVAVKGLGGFHLACDAQNVAAVNRLRERKRRPTKPLAVMIPARLAAWLPDDVQALLRSPAAPVVLVAKHTLFCEAIAPGLNEVGVMLAANPLQHLLMQDLDRPLVMTSGNLNGCPPALTNPQALRDLAGIADGWLLHNRDIVQRMDDSVMRASGEMLRRARGFVPDALPLPPGFEKAPSLLCLGADRKNTFCLVRGGQAVLSQHLGDLHDDDAERQWQQALTTIQDIWQFIPERVVTDAHPGYRATQLGQQMPYPQHQVLHHHAHAAACMAEHGWPRDGGDLIALVLDGIGQGENGALWGGECLRVNYRTCEKLGGLPAVALPGGDLAARQPWRNLLAQWQAFVPEWRTLPQAARLLNKPWQPLARAIERGVNAPLASSAGRLFDAVAAALNCAPEQISYEGEAACRLEALALSAAPQCHPVTMPVRDGELDMVTFWRQWLGWQAPDNARAWAFHDALAQGLATLAGEHARRRALSTVVCSGGVLHNRLLRERLQFWLNDFTVQFPGRLPAGDGAVAFGQAVIAAATFL
>NZ_CP046557.1|WP_156654064.1|1267766_1269917_+|formate-dehydrogenase-subunit-alpha
MKKITSVCPYCGAGCKLKLVVENNKIVRAEAAEGVTNQNQLCLKGYYGWDFLNDTRILTPRLTQPMIRYQKGGKFVPVSWEEAIRYTAKRLGEIKAKYGPRAIMTTGSSRGTGNETNYVMQKFARGVLNTNNVDCCARVCHGPSVAGLQETLGNGAMSNSISDIEHSKCLLIFGYNCADSHPIVARRVIKAKQHGAKVIVCDPRKIETARIADRHLQINNGCNMALVNAFIYTLLEENLYNSDYVARYTDGLERLRETVREYAPENVEGITGVSARQIRDAMRIYAAAPSATVMWGMGVTQFGQAVDVVKGLSTLALLTGNLGREHCGVGPVRGQNNVQGACDMGVIPNQFPGYQDVTDPQVREKFARAWGVDPARMDDQVGVRITEVPHLALEGKVKAYYIMGEDPLQTEADLGLVRKGFAALDFVVVQDIFMTKTAEAADVLLPATSWGEHGGVFTCADRGFQRFEKAVEPKGNVKRDWEIISLIATEMGYPMHYRDNQQIWDEMRELCPLFYGVTWEKMGEMGHVQWPCPTLDHPGTPWLYADNRFDTPNGKGQLFAAPWRKPAEVPDDEYPLVLCTVREVGHYSCRSMTGNCAALQALADEPGFVQMNPQDAAKLGVQDRQLVWVSSRRGKVISRADVNERINQGAVYMTYQWWIGACNELTQDNLDPVSKTPETKYCAVKIDAIADQPWAERYAQTTYRDMKTRLREAVES
>NZ_CP046557.1|WP_156654063.1|1267183_1267729_+|electron-transport-protein-HydN
MNRFIIADASKCIGCRTCEVACVVSHHDTQDCASLTPQNFLPRIHVIKGVNVSTATMCRQCEDAPCATVCPNRAIARDNDFVHVHQERCIGCKTCVVACPYGAMEVVLRPVVRSIGSGLNVMSEKAEANKCDLCYLQPDGPACVQACPTNAIVCIDRQKLEQLSQEKRRRAALDTVSSMML
>NZ_CP046557.1|WP_103178623.1|1286641_1287436_-|iron-enterobactin-ABC-transporter-ATP-binding-protein
MSANLTRLRGDNLTLGYGKKIVAEDLQVAIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPLHGSVYLDGEQIQRFASKEVARRVGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEAAVTKAMQATGITDLAAQSVDTLSGGQRQRAWIAMVLAQETSIMLLDEPTTWLDISHQIDLLELLSDLNRTQGFTLAAVLHDLNQACRYATHLIALRDGKIVAEGAPKAIVTPDLIERIYGMRCMIIDDPVAGTPLVVPLGRR
>NZ_CP046557.1|WP_156654071.1|1287432_1288422_-|iron-enterobactin-ABC-transporter-permease
MAPSRRLVFSCLLLVLVSLAVAIVSLQSGAVTLDMSQVFNALTGSAPRNITMVVTEWRMPRVMMALLVGAALGISGAIFQSLMRNPLGSPDVMGFNTGAWSGVLVAMVLFGQHLTAITLAAMAGGILTSLVVWALAWRDGIETFRLIIIGIGMRAMLMAFNTWLLLQASLETSLSAGLWFAGSLNGLTWAKTLPAAPLILLMFVCALLLVKRMRLLEMGDDSACALGVSVERSRLMLMLVAVVLTAAATAIAGPISFIALVAPHIACRLSGTARWGLTQSALCGSLLLLAADLCAQRLFMPYQLPVGVVTVSLGGIYLIVLLVQESRKK
>NZ_CP046557.1|WP_156654072.1|1288421_1289426_-|Fe(3+)-siderophore-ABC-transporter-permease
MSYSLSASRAVAVPGLLLLLTLAIALSLLVGAKPLPFSVVVDALSATCQTADCTIVRDARLPRTLAGLLAGAALGLAGALMQTLTRNPLADPGILGVNAGASFAIVLGAALFGFSSPGEQLVMALCGAFAASLLVAFTGSQGGGQLSPVRLTLAGVALGAVLEGLSNGIALLNPDVYDQLRFWQAGSLDIRTLQTLQVVSVPVLIAAAVALLLSRALNSLSLGSDTATALGSRVARTQLLGLLTITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADILGRLLVPGELRVSVVSAFIGAPVLIFLVRRKRGGGV
>NZ_CP046557.1|WP_156654073.1|1289537_1290773_+|enterobactin-transporter-EntS
MTRQSWLLNLSLLKTHPAFRAVFIARFISILSLGLLGVAVPVQIQMMTHSSWLVGLSVTLTGGAMFIGLMVGGVLADRYERKKLILLARGTCGVGFVGLCLNALLPEPSLIAIYALGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPMVGGLLLGTGNVAWNYGLAAAGTFITTLTLLRLPLLPPPPQPREHPLKSLLAAIRFLFSNPLIGGIALLGGLLTMASAVRVLYPALAITWQMSVSQIGLLYAAIPLGAAFGALTSGNLAQSARPGLIMLLATLASFIAIGFFSLMPVWALGVICLALFGWLSAVSSLLQYTLIQTQTPEAMLGRINGLWTAQNVTGDAIGAAILGGLGAIMTPVAAASSSGFVLAIVGAILLVVLAELRRFRQEIATV
>NZ_CP046557.1|WP_156654074.1|1290953_1291913_-|Fe2+-enterobactin-ABC-transporter-substrate-binding-protein
MKLPAFCRNTLLFISLLFSGLTSAVAADWPRQVTDSRGTHTLESKPTRIVSTSVTLTGSLLAIDAPVVASGATTPNNRVADDQGFLRQWGDIAKERKLARLYIGEPSAEAVAAQMPDLILISATGGDSAVALYDQLSAIAPTLIINYDDKSWQALLTQLGTITGQEQQAAARIAEFDKQLARVKQQMKLPPQPVNAIVYTAAAHSANLWTTESAQGKLLQQLGFTLAPLPAGLNPSQSQGKRHDIVQLGGENLAAGLNGEGLFLFAGDGKDVDAIYANPLLAHLPAVQNKRVWALGTETFRLDYFSATRVLERLEALFK
>NZ_CP046557.1|WP_156654075.1|1292100_1293276_+|isochorismate-synthase-EntC
MDTSLAEDVQHTATRLQKESFFFMSPYRSFTTSGCFARFSTPAVGGDDPASPFQQQLKQAFANAKAAGISNPVMVGAIPFDTRQPSSLFIPELWQSFARPARQQSARYAARTSPLTVKSRTEIPAQLAFEEMVARAAALTATPRVNKVVLSRLIDIATAEKIDSSALLEKLIAQNPASFNFHVPLEDGGVLLGASPELLLRKEGAHFSSLPLAGSARRQPDDMLDREAGNKLLASEKDRHEHELVTQAMKAVLAPRSHRLTMPASPQLITTPTLWHLATPVEGEAREDENALTLACLLHPTPALSGFPHQAAKELIAELEPFDRELFGGIVGWCDSEGNGEWVVTIRCARIQANSVRLFAGAGIVPASSPVAEWRETGVKLTTMLNVFGLH
>NZ_CP046557.1|WP_103178630.1|1293285_1294884_+|(2,3-dihydroxybenzoyl)adenylate-synthase
MTLPFTRWPDEFARRYREKGYWQDLPLTDILTRHGDSDAWALVDGERRITYRQFQQSVNNLASALQAQGVQRGETALVQLGNVAEFYITFFALLQVGVAPVNALFSHQRSELNAYASQIEPALLIADRAHGLFAGDDFLNTFMEQHRSVRTVLLRGDGLEAAIARPAEHFIATPTPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSIRRSNEICGITADTRYLNALPAAHNFAMSSPGSLGVFMAGGCVVLANDPSATLCFPLIEQHQITVTSLVPPAVSLWLQAISEGAGNAQLASLQLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTALDDTPERIINTQGRPMCPDDEVWVADEHGNPLPRGEVGRLMTRGPYTFRGYYKSPEHNASAFDENGFYCSGDLIAIDEQGYITVQGREKDQINRGGEKIAAEEVENLLLRHEAVIHAALVSMEDSLLGEKSCAYLVVKQPLRAVEVRRFLREQGVAEFKLPDRVECLEALPLTPVGKVDKKQLRLWLVERARG
>NZ_CP046557.1|WP_103178631.1|1294895_1295750_+|isochorismatase
MAIPKLTGYALPGAADLPTNKVSWTMEPARAALLIHDMQEYFLNFWGENCPMMAQVVANIARLRDYCKQQGIPVYYTAQPKEQSDEDRALLNDMWGPGLTRSPEQQRIVAELTPDEADTVLVKWRYSAFHRSPLEQMLKESGRDQLIITGVYAHIGCMTTATDAFMRDIQPFFVADALADFTRDEHLMSLNYVAGRSGRVVTTDELLPSLPASKAALRELILPLLDESDEPMDDENLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTLDAWWALLSREVK
>NZ_CP046557.1|WP_156655439.1|1295752_1296499_+|2,3-dihydro-2,3-dihydroxybenzoate-dehydrogenase
MDFTGKTVWVTGAGKGIGYATARAFAAAGAEVTGFDVAFPQAEYPFATEVLDVADAQQVNAVCGRLLASLERLDVLVNAAGILRMGATDQLSQADWQQTFAVNVGGAFNLFQQTMGQFRRQQGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALTVGLELAGSGVRSNLVSPGSTDTDMQRTLWKSDDAEQQRIRGFGEQFKLGIPLGKIARPEEIASTVLFLASDHASHITLQDIVVDGGSTLGA
>NZ_CP046557.1|WP_156654076.1|1296499_1296913_+|proofreading-thioesterase-EntH
MIWKRHLSLEALNATSLNTMVAHLGIVYTRLEDDTLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLMTRDGQSVVGTELNATHHRAVSQGKVRGVCQPLHLGRTSQSWEIVVFDEQGRRCCTCRLSTMVLG

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Crispr_ID: NZ_CP046557_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046557_2

2442220-2442334

Orphan

Consensus_repeat	Method
CCGGGTGGCGGCTACGCCTTACCCGGCCTACGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046557_2

>merge|NZ_CP046557|2|2442220-2442334|CRISPRCasFinder
CCGGGTGGCGGCTACGCCTTACCCGGCCTACGGTCTTGTAGGCCCGTGCAAGCGCAGCGCCGCCGGGCAAGAACGAATACTCCGGGTGGCGGCTGCGCCTTACCCGGCCTACGGT

>NZ_CP046557|2|2|2442220-2442334|CRISPRCasFinder
CCGGGTGGCGGCTACGCCTTACCCGGCCTACGGT	CTTGTAGGCCCGTGCAAGCGCAGCGCCGCCGGGCAAGAACGAATACT
CCGGGTGGCGGCTGCGCCTTACCCGGCCTACGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046557.1\|WP_156654572.1\|2445071_2445620_-\|50S-ribosomal-protein-L7/L12-serine-acetyltransferase	unknown	unknown	gnl\|CDD\|182270
NZ_CP046557.1\|WP_103179732.1\|2445721_2447377_-\|glucan-biosynthesis-protein	unknown	unknown	gnl\|CDD\|225673
NZ_CP046557.1\|WP_103179724.1\|2440966_2442196_+\|peptidase-T	unknown	unknown	gnl\|CDD\|237371
NZ_CP046557.1\|WP_156654567.1\|2437514_2438411_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP046557.1\|WP_103179719.1\|2435249_2436476_+\|benzoate/H(+)-symporter-BenE-family-transporter	unknown	unknown	gnl\|CDD\|129923
NZ_CP046557.1\|WP_103179733.1\|2447625_2448399_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270421
NZ_CP046557.1\|WP_156654569.1\|2442376_2442973_-\|tellurite-resistance-methyltransferase-TehB	unknown	unknown	gnl\|CDD\|183040
NZ_CP046557.1\|WP_156654566.1\|2436455_2437328_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP046557.1\|WP_103822063.1\|2431842_2431971_+\|DUF2474-domain-containing-protein	unknown	unknown	gnl\|CDD\|371167
NZ_CP046557.1\|WP_103179722.1\|2438446_2439118_-\|DUF3313-domain-containing-protein	unknown	unknown	gnl\|CDD\|378712
NZ_CP046557.1\|WP_103179736.1\|2450519_2452028_-\|carboxylesterase/lipase-family-protein	unknown	unknown	gnl\|CDD\|225181
NZ_CP046557.1\|WP_156654570.1\|2442969_2443974_-\|dicarboxylate-transporter/tellurite-resistance-protein-TehA	unknown	unknown	gnl\|CDD\|236756
NZ_CP046557.1\|WP_156654564.1\|2432416_2432647_+\|DUF2554-family-protein	unknown	unknown	gnl\|CDD\|313921
NZ_CP046557.1\|WP_156654573.1\|2448410_2449580_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|183514
NZ_CP046557.1\|WP_156654575.1\|2452070_2453414_-\|DUF1338-family-protein	unknown	unknown	gnl\|CDD\|319958
NZ_CP046557.1\|WP_156654565.1\|2432647_2434612_-\|collagenase-like-protease	unknown	unknown	gnl\|CDD\|223896
NZ_CP046557.1\|WP_156654571.1\|2444096_2445077_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|100038
NZ_CP046557.1\|WP_156654574.1\|2449690_2450533_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182990
NZ_CP046557.1\|WP_156654568.1\|2439258_2440851_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP046557.1\|WP_103179718.1\|2434692_2435220_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045

Protein	Function_ID	Function_description	E-value
NZ_CP046557.1\|WP_156654572.1\|2445071_2445620_-\|50S-ribosomal-protein-L7/L12-serine-acetyltransferase	gnl\|CDD\|182270	PRK10151, PRK10151, 50S ribosomal protein L7/L12-serine acetyltransferase.	3.50622e-123
NZ_CP046557.1\|WP_103179732.1\|2445721_2447377_-\|glucan-biosynthesis-protein	gnl\|CDD\|225673	COG3131, MdoG, Periplasmic glucans biosynthesis protein [Inorganic ion transport and metabolism].	0
NZ_CP046557.1\|WP_103179724.1\|2440966_2442196_+\|peptidase-T	gnl\|CDD\|237371	PRK13381, PRK13381, peptidase T; Provisional.	0
NZ_CP046557.1\|WP_156654567.1\|2437514_2438411_+\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.34147e-11
NZ_CP046557.1\|WP_103179719.1\|2435249_2436476_+\|benzoate/H(+)-symporter-BenE-family-transporter	gnl\|CDD\|129923	TIGR00843, Benzoate_membrane_transport_protein, benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.46305e-142
NZ_CP046557.1\|WP_103179733.1\|2447625_2448399_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.88486e-114
NZ_CP046557.1\|WP_156654569.1\|2442376_2442973_-\|tellurite-resistance-methyltransferase-TehB	gnl\|CDD\|183040	PRK11207, PRK11207, tellurite resistance methyltransferase TehB.	2.04834e-141
NZ_CP046557.1\|WP_156654566.1\|2436455_2437328_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	8.98545e-34
NZ_CP046557.1\|WP_103822063.1\|2431842_2431971_+\|DUF2474-domain-containing-protein	gnl\|CDD\|371167	pfam10617, DUF2474, Protein of unknown function (DUF2474). This family of short proteins has no known function.	3.99191e-09
NZ_CP046557.1\|WP_103179722.1\|2438446_2439118_-\|DUF3313-domain-containing-protein	gnl\|CDD\|378712	pfam11769, DUF3313, Protein of unknown function (DUF3313). This a bacterial family of proteins which are annotated as putative lipoproteins.	7.57885e-67
NZ_CP046557.1\|WP_103179736.1\|2450519_2452028_-\|carboxylesterase/lipase-family-protein	gnl\|CDD\|225181	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism].	1.33821e-176
NZ_CP046557.1\|WP_156654570.1\|2442969_2443974_-\|dicarboxylate-transporter/tellurite-resistance-protein-TehA	gnl\|CDD\|236756	PRK10764, PRK10764, potassium-tellurite ethidium and proflavin transporter; Provisional.	5.26842e-178
NZ_CP046557.1\|WP_156654564.1\|2432416_2432647_+\|DUF2554-family-protein	gnl\|CDD\|313921	pfam10829, DUF2554, Protein of unknown function (DUF2554). This family of proteins with unknown function appears to be restricted to Enterobacteriaceae.	3.09342e-36
NZ_CP046557.1\|WP_156654573.1\|2448410_2449580_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|183514	PRK12414, PRK12414, putative aminotransferase; Provisional.	0
NZ_CP046557.1\|WP_156654575.1\|2452070_2453414_-\|DUF1338-family-protein	gnl\|CDD\|319958	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	0
NZ_CP046557.1\|WP_156654565.1\|2432647_2434612_-\|collagenase-like-protease	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	8.7846e-103
NZ_CP046557.1\|WP_156654571.1\|2444096_2445077_+\|hypothetical-protein	gnl\|CDD\|100038	cd00208, LbetaH, Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.	8.50877e-11
NZ_CP046557.1\|WP_156654574.1\|2449690_2450533_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	3.91919e-59
NZ_CP046557.1\|WP_156654568.1\|2439258_2440851_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP046557.1\|WP_103179718.1\|2434692_2435220_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.96475e-16

>NZ_CP046557.1|WP_103179724.1|2440966_2442196_+|peptidase-T
MASALARQLTQRFFRYLAVTSQSDPKVKTLPSTPGQHEMARMLAAELQTLGLSEIVIDEFATVTAVKKGNVPGAPRIGFITHIDTVDVGLSPDIHPQILTFTGDDLCLNAEKDIWLRVSEHPEILAYPNEEIIFSDGTSVLGADNKSAVTVVMTLLENLTAEHKHGDIVVAFVPDEEIGLCGAKALDLARFDVDFAWTIDCCELGEIVYENFNAAAAEIRFTGVTAHPMSAKGVLVNPLLMATDYINHFDRLQTPEHTEGREGYIWFNGIQAGQNEALLKASIRDFDRESFAARKAQIGEVAEKIAAQHPTAQVSWHIEDTYSNISNAVGDDRRAIDLMFEAMESLGITPKPTPMRGGTDGAALSAKGLLTPNFFTGAHNFHSKFEFLPLKSFEASYNTALQLCLLAAR
>NZ_CP046557.1|WP_156654568.1|2439258_2440851_-|ABC-transporter-substrate-binding-protein
MKSNLTKLALTVAALTVSSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLVDFTPGTTDLVPSLAESWEVSEDGKVYTFHLRKGVKFQSNKLFTPTRDFNADDVIFSFMRQKDPKHPYHNVSNGNYSNFESLEFGKLITAIDKVDDHTVRFTLAHPEAPFVADLAWYFASILSAEYADAMMKAGTPEKVDMEPIGTGPFKLAKYQKDSRILFTAFPEYWQGKAKLDRLVFTIVPDASVRFAKLEKNECQVMPFPNPADLPRMKANKDLNLMSKAGLNTGFLSFNTQKPPLDNVKVRQALAMAINKPAIIEAVFQGTGTAAKNLLPPGVWSADSELKDYDYDPEKAKALLKEAGFANGMTIDLWAMPVQRPYNPNAKRMAEMIQADWAKVGVQTKVVTYEWGEYLKRVKGGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSAKWCYPPFDKIIAEAKSITDHDKRVALYKQAQQMMHDQMPAVMIAHSTIFEPVRKEVTGYEIDPFGKHLFWQVDIK
>NZ_CP046557.1|WP_103179722.1|2438446_2439118_-|DUF3313-domain-containing-protein
MRTTTLFKVAALSGLLLLAGCASKVAEPDQYSGFLKDYSGLKETTSASGKPTLRWVDPSYDESKYDSIIWNNITYYPEPRPTTQIGKRTLDELLAYTNTKMKTAIGQRKPVVASPGKHSLIFRGAITGVSSQKEGLQFYEVVPVALVVAGTQMATGHRTMDTHLYFEGELIDAQTNKPVIKVVRKGEGKELSNESTPMTFATLKQVVDDMATDATMFDVHKTQ
>NZ_CP046557.1|WP_156654567.1|2437514_2438411_+|EamA-family-transporter
MNAFLYALVVIIWGTTWIAIYLQQGPVPAPVSIFWRFAVATATIMAVLLILRRLRPLALRDHLFCGLQGCCVFCFNFWCFYTAAAYINTGLESVIFSMAVLYNALNSFLFFGQRPPARFYLAAALGLLGIITLFWNDLLASGWSAGLLFGIALSALGTYGFSLGNMISLRHQRNGLETMTTNAWAMLYGTLVMGAIALIRGDDFTPVWSVSYMGALLYLALFGSVIAFGAYFTLAGRIGAGKAAYSTLLFPLVALSFSTVYEGYVWHSNGIAGLLLILTGNLVMFARPESWFRRLRTA
>NZ_CP046557.1|WP_156654566.1|2436455_2437328_-|AraC-family-transcriptional-regulator
MAETYGAFENLRKHKAVLHNAVALNSGIQLAAWSNKRDTITQYCDHHTLSLYIADGYESYHKTTAGWKNGGGPDRFCLMPKESESTWDIRDDLSFVHLYCTDDHLRSVGEQVWDKSPYSFTLDENLFGDDASITALYRHFILGCDWQQSANQLTLSTASTLLLTHLVQHYSNVQWALPTVTGGLSPFVLRNVLAFIEENLAQPLTLAELAAQASLSEFHFARMFRQSMQMAPHQYVMQRRMEKAKTLVRTTRQPLTDIALACGFSSASHFSNRFRAATGLTPSQLRAAST
>NZ_CP046557.1|WP_103179719.1|2435249_2436476_+|benzoate/H(+)-symporter-BenE-family-transporter
MYAITHSATFTAVITHNGVLMRASSLTFPTLLSGFVAVLVGYASSAAIIWQAAAAAGATAPQIAGWMTALGLGMGISTLGLSWWYKAPVLTAWSTPGAALLATSLQGVTLSETIGIFIFANALIVICGVSGLFARLMKIIPHSLAAAMLAGVLLRFGLQAFSNLEGHLLLCGSMLLAWLLTKAFAPRYAIVATLLVGGLVAALKGDVVTDRLTFALVMPQFIAPTFNLTTLISIGLPFFLVTMASQNAPGFATMKASGYPVAVSPLIIVTGGLALLLSPFGVYSICIAAITAAICQSPDAHPDAGKRWLAAAAAGVFYLLAGIFGGSISGLMAALPLSWIQTLAGLALLGTISGSLHQALHNEAERDAAIVTFLLTASGATLAGIGSAFWGLVAGGVCYALLLRTRRS
>NZ_CP046557.1|WP_103179718.1|2434692_2435220_-|helix-turn-helix-transcriptional-regulator
MDITQHLAITLKTLRQARGWSLSKLAEETGVSKAMLGQVERNESSPTVSTLWKIATGLNVPFSTFITPEAENPPVFDPQQQAMVVKPLFPWDEALKYDHFSITLAPGALSESTPHEAGVIEHVVVISGELEMQIDGVWQTLLPDTGLRFAGDKPHAYRNSSGQTVHFHSLIHYPR
>NZ_CP046557.1|WP_156654565.1|2432647_2434612_-|collagenase-like-protease
MRLPSHHLELLSPARDAAIALEAILHGADAVYIGGPGFGARHNASNSLRDIADLVPFAHRFGAKVFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMGVLEMDIPPIELHASTQCDIRTVEKAKFLSDAGFTQIVLARELNLNQIRDIHQATDATIEFFIHGALCVAYSGQCNISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVAFEKHLLSMKDNDQTANLGALIDAGVRSFKIEGRYKDMSYVKNITAHYRQMLDAIIEHRGDLARSSAGRTEHFFIPSTDKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVSKEHLDVEVTEPLANGDGLNVMIKREVVGFRANTVEKTGENRYRVWPNEMPADLHKVRPHTPLNRNLDHNWQQALLKTSSERRVAVDIELGGWEEQLILTMTSEDGTSVTHTLDGQFEVANNAEKALNNLKDGVAKLGQTIYYARDIQVNLPGALFVPNSLLNQFRRETAEMLDAARLANYPRGSRKAVSVPPPVYPETHLSFLANVYNHKARAFYQRYGVELIDAAYEAHKEKGDVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKMKNHILKMPQPGSVVASVSPDDLLKTLPKRKGA
>NZ_CP046557.1|WP_156654564.1|2432416_2432647_+|DUF2554-family-protein
MFKKTLSTIMLTCALFSGQLMASHKGHEFFWVKNVEQQLRHEADSDELRVVAEESADGLREHHHWQKSRKPDTHFR
>NZ_CP046557.1|WP_103822063.1|2431842_2431971_+|DUF2474-domain-containing-protein
MNQPVWKRLMWMVIIWGGSVLALALVGFFFRVLMTAAGFKSH
>NZ_CP046557.1|WP_156654569.1|2442376_2442973_-|tellurite-resistance-methyltransferase-TehB
MTVFDENYFTEKYGLTRTHSEVLYSAGIVKPGKTLDLGCGNGRNSLYLAANGFDVTAWDKSPMGIENIESIKAKEGITNLQTAVQDLNTLRFDGEYDFILSTVVMMFLQAETIPNLIDNMQRCTKPGGYNLIVAAMDTDDYPCNVGFPFAFKTGELSDYYAGWELLKYKEEVGELHRTDAQGNRIKLRFATMLARKPT
>NZ_CP046557.1|WP_156654570.1|2442969_2443974_-|dicarboxylate-transporter/tellurite-resistance-protein-TehA
MYKTQPAERVLNLPAGYYGMVLGTIGMGFAWRYASTIWPVPHWPGEMLVLLAMTIWLLLTVAFITRAVRFPGSVLAEMRHPVMSSFVSLFPATTMLVAIGFVPWYRPLALALFSVGVVVQLSYAAWQSAGLWRGKHPEEATTPGLYLPTVANNFISAMACGALGFHDAGLVFLGAGVFSWLSLEPVILQRLRSAGELPAPMRSSLGIQLAPALVACSAWLSVNGGEADTFAKMLFGYGLLQLLFTLRLMPWYLSQPFNASFWSFSFGISALATTGLHLGQSSPSGFFHAIAIPLFIFTNAIIALLLVRTFILLMQGKLLVRADKATLMQAEEKE
>NZ_CP046557.1|WP_156654571.1|2444096_2445077_+|hypothetical-protein
MNKYQLSEESRLHHWQDGETKTAVKVRQIIAARDFSDVKSGTRGGWIDDQSALSQEDDCWIYDENSVVFAGAQVSGNARLTRPCVISHQASVGDNAWVDGAEIGHGARLSDNVTVQSSVVRGECHLFGNARILHNSMVIAAKGLTPDNEKILRIFGEATVSQSRVVHQAQIYGNAIVSYAFVEHRAEIFDNALIEGNEVNNVWVCDCAKVYGNARLLAGLEEDAIPTLRYSSQVAENALVEGNCVIKHHVLIGGEAWLRGGPILIDDKVVIQGRARIRGEVLIEHHIEITDDAVIEAAEGEMIHLRGEKVINGAQHITRTPLIGAL
>NZ_CP046557.1|WP_156654572.1|2445071_2445620_-|50S-ribosomal-protein-L7/L12-serine-acetyltransferase
MTTPTEEIIPVNAHIELRAADERYTSELHNLVIKNRAWLQDYLNWPQYVGTEEDTRQNIQSNQMLHQRGYAKMFLIFHDNALVGVLSFNAIEPLNKTGYIGYWLDEAHQGQGILSRALEAFIRHYAGRGEIRRFVIKCRVDNAASNQVALRNGFVLEGCLKEVEFLNGGYDDQNIYARICTS
>NZ_CP046557.1|WP_103179732.1|2445721_2447377_-|glucan-biosynthesis-protein
MNRRRFLKGSLAVAAVSGTSGFAALFSQAASAAESDIADGTSRRFDFSVLQSMAHDLAQTPWGGAPRPLPDTLATLTPQAYNSIQYDPKQSLWNNIENRQLDVQFFHVGMGFRRRVRMFSLDNQTAQAREIHFRPELFNYHDAGVDTKQLEGQSDLGFAGFRAFKSPELARRDIVSFLGASYFRAVDDTYQYGLSARGLALNTYADSTEEFPDFTAFWFETVKPGATTFTVYTLLDSPSITGAYKFVIHCEKTQVIMDVENHLYARKEIQQLGIAPMTSMFACGNNERRVCDTIHPQIHDSDRLAMWRGNGEWVCRPLNNPQKLQYNAYTDKNPKGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNQWGKGTVGLMEIPTTGETLDNVVCFWQPEKPVKAGDKLNFQYRLYWSARPPVRSPLANVLATRTGMGGFPEGWAPGEHYPKVWARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYVEPFDGYRILFDWYPTSDSTDTVDIRMFLRCQGEAISETWLYHYFPPAPDKRQYVDDRVMR
>NZ_CP046557.1|WP_103179733.1|2447625_2448399_-|ABC-transporter-substrate-binding-protein
MKVKAFVVGLGLLCSFSSLAATELRYGVEAEYPPFESRNASGELEGFDIELGNAICAAAALKCSWVETSFDALIPGLVAKKFDAINSAMNITDQRRQSIDFTQPIYRIPSQLVGKTGSAVDATPEGLKGKTVGVLQGSIQETYAKEHWEKQGVTVVSYKDQNMAWGDLLNGRIDASLVMSAAGQAGFLSKPQGKGFGFIGKPVADDTILGSGIGYGLRKGDEATKKQLDAAIDKVRADGTIDKLAQKYFPGIDVSVK
>NZ_CP046557.1|WP_156654573.1|2448410_2449580_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MTLRTPIQPRSKLPDVGTTIFTVIGQLSAEHNAINLSQGAPNFDCDPALVAGVHRAMQAGHNQYASMTGLASLKERIADKIASLYGTQYDPASEVLVTASASEGLYSAISGLVHAGDEVIYFEPSFDSYAPIVRLQGATPVAIKLTVPDFAVNWDEVRAAITSRTRMIIVNTPHNPSGQVFSAEDLAQLAAITRNTDIIILSDEVYEHVVFDDVPHHGMATHPGLAERSVIVSSFGKTYHVTGWRVGYCVAPAPLMDEICKIHQFLMFSADTPMQYAFAEHMADPQTWLSLAAFYQRKRDLLVNLLADSPFRLLPSAGSFFLLADYRHFSDERDSEMVKRLIVDYGVATIPLSAFYTDGTDNKLIRLSFAKDEATLRAGAQALCRVKPR
>NZ_CP046557.1|WP_156654574.1|2449690_2450533_+|LysR-family-transcriptional-regulator
MSHRAFPLTAVEAFIVTARHLNLTHAAKELCLTQGAVSRKIAALESWFGFPLFERHARGLRLSSQGSALLPDLRASYEHFLTVADQARAQQTVVRLKVPTCAMRWLVPRLLQVEREQPELQIALTTTNEHSVNFKTESYDAAIVFGTHLSAGDLLFEEALTPVLSPLRQGTAVESLTYLHPTRDKTDWSLWLEKQAVQPPAMHKNQHFDTMDLAITAAIQGLGVAIADETLVAEDIRAGRLVRPYASSVRTGASYRLVLRESRGKAAGLAAFRACLLNPG
>NZ_CP046557.1|WP_103179736.1|2450519_2452028_-|carboxylesterase/lipase-family-protein
MENVSSPIVTTCQGDICGITDGDVQVWRAIPYAAPPVGTLRWRSPQPVASWQGVRQATTFSPSSWQSSEYCQQLGGGDPGRFSEDCLYLNVWSPMERAAPLPVMVWLHGGGFTIGAGGLPPYDGKALAQRGVVVVTLNYRLGHLGFFAHPALAGEEERVVHNFALLDQIAALEWVRDNIAAFGGDPANITLFGESAGARSVLSLLASPLAKGLFHKAIIQSGYTLPDTPREQALKKGEALAAHFGLENATAEQLRAIPPEAFWPLTAPHNIAPAPIHGDCVLPEPMLEVFFAARHHPVPIMVGSNSDEASVMAVFGIDLAGQIQKLRRERRLGLGLIKLLYPGVKDDTELGRQVCRDMAFTTLGFVVMQAQQRVGEPCWRYWFDYVAEAEHATYINGAWHGNEVPYVFDTLTLAEPARQYVNANDLAFAAQVADYWVNFARHASRECDTLNGPTRWPACHRRRDVLLRIGVNKHAGFKLENRFMRARMVLFKRVMKHHVSLD
>NZ_CP046557.1|WP_156654575.1|2452070_2453414_-|DUF1338-family-protein
MANTITADDIRENFSQAMSAMYQQEVPQYGTLLELVADVNLAVLENNPKLHEQLANADELARLNLERHGAIRVGTALELATLRRMFAIMGMFPVSYYDLSQAGVPVHSTAFRPVDDAALCRNPFRIFTSLLRLELIDNVALREKAAEILARRNIFTPRCLALIDLHEAEGAFTPAQADEFVQEALETFRWHRHATVDHETYLALHNEHRLIADVVCFPGCHINHLTPRTLDIDRVQALMPEYGIEPKMLIEGPPRRETPLLLRQTSFKALEEPVLFAGEARGTHTARFGEIEQRGVALTPKGRELYDRLLAEAGTGKDNLTHQLHLQEVFQAFPDSDIFLRRQGLAWFRYRLTPAGEAHRHAFGPGDDPQPLIERGWVVAQPITYEDFLPVSAAGIFQSNLGNETQARTRGNASRDAFEEALGCPVLDEFTLYQEAEERSKRRCGLL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046557_2	2.1\|2442254\|47\|NZ_CP046557\|CRISPRCasFinder	2442254-2442300	47	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	272352-272398	9	0.809

1. spacer 2.1|2442254|47|NZ_CP046557|CRISPRCasFinder matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.809

cttgtaggcccgtgcaagcgcagcgccgccgggcaaga---acgaatact	CRISPR spacer
tctgtagtcccgtgcaagcgcagcgccgccgggcaatatccgcggat---	Protospacer
..***** **************************** *   .**.**

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

387530 : 427445

Enterobacteria_phage(40.0%)

integrase,transposase

attL 381240:381254|attR 431697:431711

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
381240:381254	attL	NA	NA	NA	NA
WP_104009829.1\|387530_387764_+\|transposase	Tn3 family transposase	Q1MVP5	Enterobacteria_phage	5.8e-10	80.0
WP_009652456.1\|387776_387989_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_016154441.1\|388279_388630_+	DUF3147 family protein	NA	NA	NA	NA
WP_156653758.1\|389611_390761_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	9.8e-50	41.6
WP_009652402.1\|391346_391589_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_016154439.1\|393515_393845_+	hypothetical protein	NA	NA	NA	NA
WP_156653759.1\|395386_396506_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.4
WP_016154435.1\|396797_397160_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_009654826.1\|397205_398210_-	cation diffusion facilitator family transporter	A0A1V0SED0	Indivirus	7.8e-19	25.1
WP_009654818.1\|398395_400891_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.0e-92	34.6
WP_016154433.1\|400904_401369_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_009654812.1\|401458_401911_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_016154432.1\|401992_404488_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.9e-144	45.8
WP_071687229.1\|404562_404985_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_009654822.1\|404974_405238_+	hypothetical protein	NA	NA	NA	NA
WP_023302364.1\|405550_406498_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA
WP_023336667.1\|406717_407152_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_023302365.1\|407301_410742_+	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_016154430.1\|411787_412240_-	peptide deformylase	Q6VT21	Vibrio_phage	7.8e-11	32.6
WP_016154429.1\|412416_413784_-	outer membrane porin, OprD family	NA	NA	NA	NA
WP_016154425.1\|415194_415407_-	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_016154424.1\|415833_416571_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	9.7e-27	32.6
WP_094898333.1\|418904_420144_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.4e-131	79.4
WP_016154418.1\|420596_422558_-	DUF3732 domain-containing protein	NA	NA	NA	NA
WP_016154417.1\|422554_423043_-	hypothetical protein	NA	NA	NA	NA
WP_016154416.1\|423039_424263_-	hypothetical protein	NA	NA	NA	NA
WP_156653760.1\|424830_425853_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_016154414.1\|426254_427445_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	1.5e-122	54.7
431697:431711	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1887607 : 1939402

Enterobacteria_phage(38.1%)

capsid,tail,transposase,portal,lysis,tRNA,terminase,head,integrase,protease

attL 1887889:1887904|attR 1918174:1918189

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103179129.1\|1887607_1888099_+\|transposase	transposase	NA	NA	NA	NA
1887889:1887904	attL	NA	NA	NA	NA
WP_103179130.1\|1888238_1889360_-	cupin domain-containing protein	NA	NA	NA	NA
WP_103179131.1\|1889449_1890913_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA
WP_039028964.1\|1890913_1891585_-	two-component system response regulator PhoP	NA	NA	NA	NA
WP_103179175.1\|1891709_1893080_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	6.5e-109	46.2
WP_103179176.1\|1893099_1893729_-	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_139156335.1\|1893756_1894866_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_103179178.1\|1894907_1895381_-	NUDIX hydrolase	NA	NA	NA	NA
WP_156654295.1\|1895373_1896045_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_156238412.1\|1896162_1897413_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	6.7e-20	90.7
WP_156654296.1\|1897530_1898661_-\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	2.0e-119	58.8
WP_114387395.1\|1898641_1898887_-	excisionase	NA	NA	NA	NA
WP_156654297.1\|1898939_1901192_-	exonuclease	K7PJT5	Enterobacteria_phage	1.5e-171	63.0
WP_156655460.1\|1901329_1901659_-	transcriptional regulator	NA	NA	NA	NA
WP_156654298.1\|1901674_1902010_-	hypothetical protein	NA	NA	NA	NA
WP_156654299.1\|1902175_1902358_-	DUF1482 family protein	NA	NA	NA	NA
WP_156654300.1\|1902750_1903140_-	helix-turn-helix domain-containing protein	A0A077KGZ5	Edwardsiella_phage	2.8e-17	68.6
WP_156654301.1\|1903248_1903488_+	helix-turn-helix domain-containing protein	K7PKH4	Enterobacteria_phage	3.3e-16	56.9
WP_156654302.1\|1903475_1904030_+	hypothetical protein	NA	NA	NA	NA
WP_156654303.1\|1904084_1904903_+	DUF1376 domain-containing protein	A0A0U2RT81	Escherichia_phage	8.5e-56	47.8
WP_156654304.1\|1904905_1905646_+	DNA replication protein DnaC	S4TNF5	Salmonella_phage	1.1e-97	72.4
WP_156654305.1\|1905664_1906084_+	PerC family transcriptional regulator	NA	NA	NA	NA
WP_156654306.1\|1906087_1906348_+	DUF977 family protein	H6WRX9	Salmonella_phage	2.4e-25	65.5
WP_156654307.1\|1906857_1908774_-	NACHT domain-containing protein	NA	NA	NA	NA
WP_156654308.1\|1909418_1909652_+	DinI-like family protein	K7PM44	Enterobacteria_phage	5.8e-26	75.3
WP_072010775.1\|1909693_1909939_+	hypothetical protein	H6WRY6	Salmonella_phage	4.5e-21	65.2
WP_032617608.1\|1910069_1910276_+	hypothetical protein	NA	NA	NA	NA
WP_051916131.1\|1910296_1910629_+	RusA family crossover junction endodeoxyribonuclease	K7P6W0	Enterobacteria_phage	9.4e-38	64.2
WP_032617610.1\|1910628_1911669_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.8e-106	56.3
WP_032617611.1\|1911682_1912297_+	hypothetical protein	H9C175	Pectobacterium_phage	2.8e-64	62.2
WP_072010776.1\|1913092_1913416_+	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_103179204.1\|1913936_1914176_+\|lysis	lysis protein	A0A2H4JCI1	uncultured_Caudovirales_phage	2.3e-17	57.9
WP_156654309.1\|1914176_1914680_+	glycoside hydrolase family protein	A0A2H4JCH1	uncultured_Caudovirales_phage	6.5e-75	76.6
WP_156654310.1\|1914669_1915122_+\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	3.3e-33	56.5
WP_156654311.1\|1915132_1915426_+	hypothetical protein	G8C7W3	Escherichia_phage	7.5e-31	70.1
WP_156654312.1\|1915769_1916120_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	4.6e-51	80.7
WP_032617619.1\|1916116_1916317_+	hypothetical protein	Q6UAR8	Klebsiella_phage	1.7e-10	89.4
WP_156654313.1\|1916509_1916983_+\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	8.3e-64	73.9
WP_156654314.1\|1916986_1918714_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	2.1e-269	77.4
1918174:1918189	attR	NA	NA	NA	NA
WP_156654315.1\|1918713_1920018_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	1.4e-230	90.8
WP_156654316.1\|1920026_1920881_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	2.8e-118	76.8
WP_114317019.1\|1920893_1922114_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	8.1e-212	95.6
WP_156654317.1\|1922166_1922352_+	hypothetical protein	K7PHI6	Enterobacteria_phage	2.4e-11	60.0
WP_156264399.1\|1922361_1922688_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.5e-27	53.7
WP_156654318.1\|1922684_1923026_+\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	1.1e-06	48.6
WP_156654319.1\|1923022_1923472_+	hypothetical protein	Q9MCS9	Enterobacteria_phage	1.2e-64	83.9
WP_156654320.1\|1923468_1923798_+	DUF3168 domain-containing protein	A0A1P8DTJ3	Proteus_phage	1.1e-22	52.7
WP_156654321.1\|1923856_1924561_+\|tail	phage tail protein	Q9MCS7	Enterobacteria_phage	8.5e-105	82.9
WP_156654322.1\|1924595_1924982_+\|tail	phage tail protein	K7PKV6	Enterobacterial_phage	7.5e-63	93.0
WP_156654323.1\|1924990_1925269_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	5.3e-42	95.7
WP_016042208.1\|1925326_1925515_+	hypothetical protein	K7PH36	Enterobacterial_phage	3.0e-25	100.0
WP_156654324.1\|1928832_1929174_+\|tail	phage tail protein	E4WL34	Enterobacteria_phage	2.3e-31	58.2
WP_156654325.1\|1929226_1929964_+\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	2.3e-124	83.7
WP_156654326.1\|1929966_1930713_+	peptidase P60	M9NZD8	Enterobacteria_phage	2.3e-108	72.8
WP_156654327.1\|1930690_1931305_+\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	4.7e-75	69.3
WP_156654328.1\|1931358_1936308_+	DUF1983 domain-containing protein	E4WL39	Enterobacteria_phage	0.0e+00	76.9
WP_156654329.1\|1936372_1938034_+	hypothetical protein	G8GWG3	Rhodobacter_phage	1.5e-22	35.2
WP_156654330.1\|1938033_1938336_+	hypothetical protein	NA	NA	NA	NA
WP_156654331.1\|1938347_1939079_+	hypothetical protein	A0A291AXP5	Shigella_phage	1.2e-24	38.2
WP_156654332.1\|1939162_1939402_+	DNA polymerase V	I6PD82	Cronobacter_phage	6.1e-23	60.8

DBSCAN-SWA_3

2201250 : 2211366

Escherichia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156654443.1\|2201250_2203680_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	8.8e-218	49.6
WP_103824474.1\|2203830_2204136_-	DUF1161 domain-containing protein	NA	NA	NA	NA
WP_156654444.1\|2204241_2204952_+	YnfC family lipoprotein	NA	NA	NA	NA
WP_103179479.1\|2204990_2205320_-	DUF1283 family protein	NA	NA	NA	NA
WP_103179480.1\|2205469_2205796_+	YnfA family protein	A0A218MNG8	uncultured_virus	6.6e-20	52.5
WP_103179481.1\|2205905_2207120_+	D-galactonate dehydratase family protein	Q6A202	Oenococcus_phage	6.3e-47	29.7
WP_156654445.1\|2207131_2208151_+	Zn-dependent oxidoreductase	E3SJ82	Synechococcus_phage	6.1e-19	27.5
WP_156654446.1\|2208204_2209584_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.7e-28	26.6
WP_156654447.1\|2209905_2211366_+	fructuronate reductase	H8ZJP8	Ostreococcus_tauri_virus	6.6e-43	32.7

DBSCAN-SWA_4

2786465 : 2948933

181

Enterobacteria_phage(24.11%)

capsid,tail,transposase,holin,portal,lysis,tRNA,terminase,coat,head,integrase,protease

attL 2821876:2821903|attR 2874676:2874703

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156654702.1\|2786465_2787161_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_103180016.1\|2787227_2789138_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.3e-88	32.7
WP_103180017.1\|2789264_2789609_+	RidA family protein	NA	NA	NA	NA
WP_039030781.1\|2789614_2789797_-	YoaH family protein	NA	NA	NA	NA
WP_103180019.1\|2789858_2791211_+	aminodeoxychorismate synthase component 1	S4VT78	Pandoravirus	1.6e-43	41.7
WP_103180020.1\|2791214_2791793_+	CoA pyrophosphatase	NA	NA	NA	NA
WP_156654703.1\|2791976_2793341_+	L-serine ammonia-lyase	NA	NA	NA	NA
WP_156654704.1\|2793505_2795098_+	EAL domain-containing protein	NA	NA	NA	NA
WP_103180023.1\|2795098_2796658_-	CNNM family cation transport protein YoaE	A0A0R6PEZ3	Moraxella_phage	7.3e-40	44.0
WP_114314650.1\|2797121_2798099_+	PTS mannose transporter subunit IIAB	NA	NA	NA	NA
WP_103180025.1\|2798157_2798955_+	PTS mannose/fructose/sorbose transporter subunit IIC	NA	NA	NA	NA
WP_103180026.1\|2798958_2799819_+	PTS mannose transporter subunit IID	NA	NA	NA	NA
WP_103180027.1\|2799876_2800335_+	DUF986 domain-containing protein	NA	NA	NA	NA
WP_139156373.1\|2800722_2801286_+	manganese efflux pump MntP	NA	NA	NA	NA
WP_156654705.1\|2801282_2802098_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA
WP_103180030.1\|2802161_2803880_-	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA
WP_001062678.1\|2804099_2804309_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	1.6e-22	78.1
WP_032622791.1\|2804334_2804466_-	YobF family protein	NA	NA	NA	NA
WP_156654706.1\|2806001_2806292_-	hypothetical protein	NA	NA	NA	NA
WP_103180034.1\|2806365_2806509_-	PhoP/PhoQ regulator MgrB	NA	NA	NA	NA
WP_103180035.1\|2806667_2806907_+	hypothetical protein	NA	NA	NA	NA
WP_039030796.1\|2806962_2807754_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_103180036.1\|2807932_2809306_+	MFS transporter	NA	NA	NA	NA
WP_103180037.1\|2809353_2810235_-\|protease	protease HtpX	NA	NA	NA	NA
WP_103180038.1\|2810430_2812479_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	1.4e-83	33.0
WP_103180039.1\|2812498_2813182_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_103180040.1\|2813279_2813777_-	GAF domain-containing protein	NA	NA	NA	NA
WP_103180041.1\|2813908_2815192_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_156654707.1\|2815160_2817794_+	MCE family protein	NA	NA	NA	NA
WP_103180043.1\|2817870_2819313_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_103181101.1\|2819416_2819656_+	YebV family protein	NA	NA	NA	NA
WP_039030805.1\|2819760_2819952_+	YebW family protein	NA	NA	NA	NA
WP_156654708.1\|2819952_2820597_-	protein-serine/threonine phosphatase	M9P0E4	Enterobacteria_phage	4.3e-55	48.4
WP_103181102.1\|2820854_2821721_+	DUF535 domain-containing protein	NA	NA	NA	NA
2821876:2821903	attL	NA	NA	NA	NA
WP_032611732.1\|2822598_2824077_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.3e-200	74.8
WP_032611763.1\|2824094_2824922_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	3.7e-51	42.0
WP_156655494.1\|2825033_2825357_-	hypothetical protein	K7PGV5	Enterobacterial_phage	9.2e-22	50.0
WP_156654709.1\|2825704_2826703_-	hypothetical protein	O64338	Escherichia_phage	3.1e-44	49.8
WP_156654710.1\|2826714_2827017_-	hypothetical protein	NA	NA	NA	NA
WP_156653759.1\|2827219_2828339_+\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.4
WP_156654711.1\|2828349_2829921_-	hypothetical protein	A0A0F7L427	uncultured_marine_virus	1.3e-25	34.6
WP_156654712.1\|2829981_2834979_-	DUF1983 domain-containing protein	G8C7R4	Escherichia_phage	4.7e-16	44.5
WP_156654713.1\|2835034_2835628_-\|tail	tail assembly protein	G8C7R3	Escherichia_phage	2.9e-90	88.0
WP_156654714.1\|2835615_2836347_-	peptidase P60	G8C7R2	Escherichia_phage	7.4e-144	92.1
WP_082693158.1\|2836359_2837133_-\|tail	phage minor tail protein L	G8C7R1	Escherichia_phage	3.6e-133	87.5
WP_156654715.1\|2837129_2837480_-	hypothetical protein	G8C7R0	Escherichia_phage	1.6e-56	94.8
WP_156654716.1\|2837795_2838071_+	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_127472154.1\|2838577_2838964_-	hypothetical protein	NA	NA	NA	NA
WP_156654717.1\|2839065_2842221_-\|tail	phage tail tape measure protein	G8C7Q6	Escherichia_phage	0.0e+00	63.5
WP_156654718.1\|2842220_2842508_-	hypothetical protein	I6PD79	Cronobacter_phage	2.7e-17	58.5
WP_156654719.1\|2842525_2842864_-	hypothetical protein	G8C7Q5	Escherichia_phage	1.4e-49	83.0
WP_156654720.1\|2842928_2843861_-\|tail	phage tail protein	G8C7Q3	Escherichia_phage	5.1e-158	93.5
WP_156654721.1\|2843908_2844358_-	hypothetical protein	G8C7Q2	Escherichia_phage	1.3e-74	92.6
WP_156654722.1\|2844347_2844947_-	hypothetical protein	G8C7Q1	Escherichia_phage	5.0e-98	88.9
WP_156654723.1\|2844949_2845303_-	hypothetical protein	G8C7Q0	Escherichia_phage	7.9e-51	88.9
WP_156654724.1\|2845304_2845787_-	hypothetical protein	G8C7P9	Escherichia_phage	1.0e-77	86.2
WP_156654725.1\|2846185_2847322_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	3.2e-194	92.3
WP_156654726.1\|2847338_2848091_-	hypothetical protein	G8C7P6	Escherichia_phage	1.6e-125	91.6
WP_156654727.1\|2848197_2848407_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	2.0e-14	53.0
WP_156654728.1\|2848410_2849517_-	hypothetical protein	G8C7P5	Escherichia_phage	3.8e-192	92.4
WP_156654729.1\|2849518_2850922_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	2.1e-240	89.8
WP_156654730.1\|2850926_2852498_-\|terminase	terminase	G8C7P3	Escherichia_phage	1.5e-306	92.7
WP_156654731.1\|2852494_2853067_-\|terminase	terminase small subunit	I6PDJ6	Cronobacter_phage	2.4e-65	80.5
WP_156654732.1\|2853090_2853318_+	hypothetical protein	NA	NA	NA	NA
WP_156654733.1\|2853403_2853970_+	hypothetical protein	NA	NA	NA	NA
WP_156654734.1\|2854093_2854486_-	DUF2570 domain-containing protein	Q8SBD9	Shigella_phage	2.9e-30	56.6
WP_103179509.1\|2854485_2855049_-	lysozyme	M9P0E5	Enterobacteria_phage	2.2e-79	86.6
WP_103179508.1\|2855026_2855251_-\|lysis	lysis protein	M9NZI9	Enterobacteria_phage	4.8e-30	83.8
WP_103179202.1\|2855772_2856096_-	four-helix bundle copper-binding protein	NA	NA	NA	NA
WP_103179507.1\|2856257_2856443_-	hypothetical protein	NA	NA	NA	NA
WP_156654735.1\|2857127_2857910_-	antitermination protein	K7PKS8	Enterobacteria_phage	7.0e-108	73.6
WP_156654736.1\|2857906_2858047_-	YlcG family protein	A0A0M5M7B2	Salmonella_phage	8.0e-07	76.3
WP_156654737.1\|2858043_2858655_-	recombination protein NinG	A0A0M4RU10	Salmonella_phage	2.4e-79	75.4
WP_156655495.1\|2858657_2858864_-	hypothetical protein	S4TNP0	Salmonella_phage	2.1e-16	57.4
WP_156654738.1\|2858863_2859460_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.4e-95	86.2
WP_156654739.1\|2859494_2859734_-	hypothetical protein	K7PHG9	Enterobacteria_phage	1.5e-16	58.0
WP_156654740.1\|2860625_2861408_-	hypothetical protein	NA	NA	NA	NA
WP_156654741.1\|2861590_2861923_-	hypothetical protein	NA	NA	NA	NA
WP_156655496.1\|2861919_2862354_-	hypothetical protein	F1C5B6	Cronobacter_phage	1.8e-09	34.6
WP_156654742.1\|2862358_2862622_-	DUF977 family protein	H6WRX9	Salmonella_phage	4.4e-22	63.8
WP_156654743.1\|2862635_2863388_-	DNA replication protein DnaC	S4TNF5	Salmonella_phage	3.8e-111	79.6
WP_156655497.1\|2863390_2864671_-	hypothetical protein	H6WRX7	Salmonella_phage	1.9e-102	53.2
WP_156654744.1\|2864752_2865322_-	hypothetical protein	NA	NA	NA	NA
WP_001568772.1\|2865333_2865552_-	hypothetical protein	A0A0M4QX15	Salmonella_phage	1.5e-20	64.8
WP_156654745.1\|2865624_2866038_+	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	4.0e-46	75.0
WP_156654746.1\|2866173_2866647_+	hypothetical protein	K7PLT9	Enterobacteria_phage	3.6e-51	60.5
WP_156654747.1\|2866643_2867576_+	hypothetical protein	K7PGT0	Enterobacteria_phage	8.1e-79	50.8
WP_103179488.1\|2867945_2868152_+	cell division inhibitor protein	K7PM31	Enterobacteria_phage	4.9e-29	86.8
WP_156654748.1\|2868463_2871805_+	exodeoxyribonuclease	K7P6V4	Enterobacteria_phage	0.0e+00	62.7
WP_156654749.1\|2871816_2872932_+	enterohemolysin	K7PKR8	Enterobacteria_phage	6.5e-184	87.9
WP_156654750.1\|2872969_2873209_+	DUF4060 family protein	K7PHF4	Enterobacteria_phage	1.4e-30	87.3
WP_032611896.1\|2873273_2873546_+	excisionase	A0A2H4J5E1	uncultured_Caudovirales_phage	7.2e-28	63.3
WP_156654751.1\|2873514_2874600_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	4.5e-145	66.8
WP_103180045.1\|2874920_2875259_-	YebY family protein	NA	NA	NA	NA
2874676:2874703	attR	NA	NA	NA	NA
WP_156654752.1\|2875273_2876146_-	copper homeostasis membrane protein CopD	NA	NA	NA	NA
WP_103180047.1\|2876147_2876513_-	CopC domain-containing protein YobA	NA	NA	NA	NA
WP_103180048.1\|2876649_2876880_+	DNA polymerase III subunit theta	G8C7V1	Escherichia_phage	5.3e-16	66.2
WP_103181103.1\|2876987_2877644_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_103180049.1\|2877668_2878331_+	exodeoxyribonuclease X	Q6UAU3	Klebsiella_phage	6.5e-06	38.5
WP_156654753.1\|2878312_2880394_-	oligopeptidase B	NA	NA	NA	NA
WP_156654754.1\|2880484_2881132_-	DUF533 domain-containing protein	NA	NA	NA	NA
WP_103180052.1\|2881219_2881567_-	hypothetical protein	NA	NA	NA	NA
WP_103180053.1\|2881715_2882894_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA
WP_039030817.1\|2882999_2883641_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_103180054.1\|2883680_2885492_-	phosphogluconate dehydratase	NA	NA	NA	NA
WP_103180055.1\|2885726_2887202_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	6.0e-76	36.2
WP_103180056.1\|2887525_2888431_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_103180057.1\|2888554_2889997_+	pyruvate kinase	NA	NA	NA	NA
WP_156654755.1\|2890108_2891080_-	lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase	NA	NA	NA	NA
WP_103180059.1\|2891196_2892519_-	murein DD-endopeptidase MepM	A8ATH6	Listeria_phage	1.5e-14	40.9
WP_156655498.1\|2892534_2893479_-	zinc ABC transporter substrate-binding protein ZnuA	NA	NA	NA	NA
WP_103180060.1\|2893556_2894312_+	zinc ABC transporter ATP-binding protein ZnuC	G3M9Y6	Bacillus_virus	6.5e-18	28.9
WP_103180061.1\|2894308_2895094_+	zinc ABC transporter permease subunit ZnuB	NA	NA	NA	NA
WP_103180062.1\|2895195_2896206_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	3.6e-08	28.1
WP_103180063.1\|2896214_2896826_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_103180064.1\|2896909_2897431_-	crossover junction endodeoxyribonuclease RuvC	G3MA90	Bacillus_virus	3.4e-10	35.1
WP_103180065.1\|2897465_2898206_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_103180066.1\|2898233_2898677_-	dihydroneopterin triphosphate diphosphatase	NA	NA	NA	NA
WP_156654756.1\|2898678_2900451_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_103180068.1\|2900691_2901258_+	hydrolase	NA	NA	NA	NA
WP_000497460.1\|2901611_2901851_+	DinI family protein	K7PKR6	Enterobacteria_phage	7.4e-37	100.0
WP_048217473.1\|2901936_2902347_-	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_142489978.1\|2902538_2902871_-	hypothetical protein	K7PGV5	Enterobacterial_phage	2.0e-19	53.1
WP_142489979.1\|2902870_2903110_-	hypothetical protein	K7P7N3	Enterobacteria_phage	4.4e-29	75.6
WP_156654757.1\|2904679_2904982_-	hypothetical protein	NA	NA	NA	NA
WP_156654758.1\|2904981_2906643_-	hypothetical protein	A0A0F7L427	uncultured_marine_virus	8.9e-28	37.9
WP_156654759.1\|2906707_2911636_-	DUF1983 domain-containing protein	E4WL39	Enterobacteria_phage	5.2e-15	42.6
WP_156654760.1\|2911689_2912304_-\|tail	tail assembly protein	K7PH59	Enterobacterial_phage	2.7e-75	69.8
WP_156654761.1\|2912281_2913028_-	peptidase P60	M9NZD8	Enterobacteria_phage	6.0e-109	73.3
WP_156654762.1\|2913030_2913768_-\|tail	phage minor tail protein L	M9NYX1	Enterobacteria_phage	7.7e-125	84.1
WP_156654763.1\|2913820_2914162_-\|tail	phage tail protein	E4WL34	Enterobacteria_phage	5.1e-31	58.2
WP_156654764.1\|2914170_2917449_-\|tail	phage tail tape measure protein	A0A220NRN7	Escherichia_phage	0.0e+00	71.3
WP_156654765.1\|2917489_2917831_-	hypothetical protein	NA	NA	NA	NA
WP_156654766.1\|2917901_2918165_-	DUF4035 domain-containing protein	K7PLY6	Enterobacterial_phage	2.8e-37	89.7
WP_156654767.1\|2918188_2918590_-\|tail	phage tail protein	K7P7C2	Enterobacteria_phage	5.1e-62	88.7
WP_156654768.1\|2918643_2919114_-\|tail	phage tail protein	K7PJR9	Enterobacterial_phage	3.5e-78	94.2
WP_156654769.1\|2919168_2919516_-	DUF3168 domain-containing protein	K7P7Q9	Enterobacteria_phage	9.8e-54	90.4
WP_156654770.1\|2919512_2919962_-	hypothetical protein	K7PH84	Enterobacterial_phage	9.3e-73	96.0
WP_150320643.1\|2919958_2920297_-\|head	phage head closure protein	K7P7L2	Enterobacteria_phage	1.5e-51	87.5
WP_156654771.1\|2920296_2920623_-	hypothetical protein	K7PGU9	Enterobacterial_phage	5.9e-53	93.5
WP_057059277.1\|2920657_2921815_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	2.0e-204	96.4
WP_156654772.1\|2921817_2922495_-\|head,protease	HK97 family phage prohead protease	Q77W96	Enterobacteria_phage	2.2e-118	93.8
WP_156654773.1\|2922512_2923787_-\|portal	phage portal protein	F1C584	Cronobacter_phage	5.8e-245	98.3
WP_156654774.1\|2923786_2925301_-\|terminase	terminase large subunit	Q9MCT1	Enterobacteria_phage	4.0e-285	96.4
WP_063922244.1\|2925306_2925792_-	hypothetical protein	K7PGU7	Enterobacterial_phage	2.6e-76	92.5
WP_156654775.1\|2925975_2926179_-	hypothetical protein	A0A220NRN5	Escherichia_phage	3.5e-19	73.1
WP_156654776.1\|2926178_2926520_-	HNH endonuclease	K7P7P4	Enterobacteria_phage	9.6e-62	96.5
WP_156654777.1\|2926516_2927107_-	hypothetical protein	K7P7D2	Enterobacteria_phage	3.7e-101	87.2
WP_156654778.1\|2927088_2928546_-	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	6.1e-214	72.0
WP_156654779.1\|2928670_2929084_-	hypothetical protein	NA	NA	NA	NA
WP_156654780.1\|2929181_2929475_-	hypothetical protein	G8C7W3	Escherichia_phage	8.3e-30	67.0
WP_156654781.1\|2929471_2929666_-	hypothetical protein	A0A286SGR9	Klebsiella_phage	5.7e-19	73.4
WP_156654782.1\|2929616_2929892_-	hypothetical protein	G8C7W1	Escherichia_phage	8.3e-32	84.3
WP_156654783.1\|2929899_2930529_-	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	8.7e-101	87.6
WP_156654784.1\|2930528_2930810_-\|holin	phage holin family protein	A0A0U2SHD1	Escherichia_phage	2.0e-17	46.0
WP_063136051.1\|2930796_2931183_-	hypothetical protein	A0A192Y8P2	Salmonella_phage	3.3e-58	95.3
WP_156654785.1\|2931290_2931446_-	DUF3927 domain-containing protein	S4TRP5	Salmonella_phage	2.7e-08	63.8
WP_063160072.1\|2931442_2931871_-	tellurite resistance TerB family protein	H6WZJ6	Escherichia_phage	9.8e-64	91.6
WP_156654786.1\|2932144_2932927_-	antitermination protein	F1C595	Cronobacter_phage	4.1e-108	76.0
WP_156654787.1\|2932923_2933901_-	DNA primase	F1C597	Cronobacter_phage	5.2e-169	87.3
WP_156654788.1\|2933897_2935508_-	DEAD/DEAH box helicase	F1C598	Cronobacter_phage	3.6e-276	85.6
WP_156654789.1\|2935934_2936231_-	hypothetical protein	A0A1B5FPB9	Escherichia_phage	1.7e-27	69.3
WP_156654790.1\|2936214_2936448_-	helix-turn-helix domain-containing protein	A0A2H4JEY0	uncultured_Caudovirales_phage	1.4e-11	50.7
WP_156654791.1\|2936567_2937257_+	helix-turn-helix domain-containing protein	F1C5C2	Cronobacter_phage	7.3e-85	66.2
WP_156654792.1\|2937440_2937761_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	5.5e-19	50.0
WP_156654793.1\|2937750_2937948_+	hypothetical protein	NA	NA	NA	NA
WP_156654794.1\|2938127_2938352_+	hypothetical protein	NA	NA	NA	NA
WP_156654795.1\|2938352_2938733_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	3.9e-40	71.8
WP_156654796.1\|2938924_2939143_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	1.5e-20	72.2
WP_156654797.1\|2939139_2939646_+	hypothetical protein	F1C5A2	Cronobacter_phage	2.1e-52	54.8
WP_156655499.1\|2939658_2940516_+	ORF6N domain-containing protein	F1C5A3	Cronobacter_phage	6.0e-129	78.5
WP_063135773.1\|2940508_2940931_+	hypothetical protein	NA	NA	NA	NA
WP_156654798.1\|2940923_2941169_+	excisionase	Q8W657	Enterobacteria_phage	7.1e-35	85.5
WP_156654799.1\|2941224_2942538_+	DUF3596 domain-containing protein	Q8W658	Enterobacteria_phage	9.0e-225	87.2
WP_156654800.1\|2942516_2943290_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	3.1e-60	81.9
WP_103180070.1\|2943340_2943736_+	hypothetical protein	NA	NA	NA	NA
WP_103180071.1\|2943776_2944517_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	1.8e-25	31.7
WP_103822389.1\|2944513_2945485_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_156654801.1\|2945636_2946380_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_156655500.1\|2946464_2947025_-	VOC family protein	NA	NA	NA	NA
WP_103180075.1\|2947199_2948933_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	1.5e-86	33.9

DBSCAN-SWA_5

3563552 : 3680133

123

Salmonella_phage(47.56%)

capsid,tail,integrase,transposase,portal,lysis,tRNA,terminase,head,protease,plate

attL 3608353:3608398|attR 3642228:3642273

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103180761.1\|3563552_3564290_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_103180762.1\|3564422_3565751_+	ATP-dependent RNA helicase SrmB	E3T5E1	Cafeteria_roenbergensis_virus	2.5e-41	29.3
WP_103180763.1\|3565802_3566186_-	autonomous glycyl radical cofactor GrcA	A0A088FS37	Shigella_phage	5.8e-31	68.9
WP_103180764.1\|3566500_3567190_+	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	9.3e-56	49.3
WP_103180765.1\|3567283_3568369_-\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA
WP_103180766.1\|3568575_3568995_+	thioredoxin TrxC	A0A0K2FIM3	Achromobacter_phage	7.0e-14	36.5
WP_103180767.1\|3569066_3569765_+	DTW domain-containing protein	NA	NA	NA	NA
WP_156655042.1\|3569800_3572464_+	protein lysine acetyltransferase	NA	NA	NA	NA
WP_103180769.1\|3572574_3573930_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_103181124.1\|3573973_3574297_+	YfiM family lipoprotein	NA	NA	NA	NA
WP_156655043.1\|3574293_3575601_-	MFS transporter	Q6JIH2	Burkholderia_virus	2.2e-42	30.2
WP_103180771.1\|3575753_3576209_-	DUF4385 domain-containing protein	A0A0C5AAP9	Cyanophage	1.0e-34	48.7
WP_103180772.1\|3581879_3584453_-	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	3.8e-126	35.1
WP_156655044.1\|3584582_3585314_-	polyphenol oxidase	NA	NA	NA	NA
WP_103180774.1\|3585310_3586291_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_103180775.1\|3586421_3587159_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_032613238.1\|3587430_3587772_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_103180776.1\|3588030_3589191_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_156655045.1\|3589187_3590060_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_103180778.1\|3590120_3591242_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_103180779.1\|3591252_3592323_-	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	4.8e-91	52.1
WP_156655508.1\|3592536_3592911_+	DUF2799 domain-containing protein	NA	NA	NA	NA
WP_103180781.1\|3593110_3593596_+	YfiR family protein	NA	NA	NA	NA
WP_156655046.1\|3593588_3594809_+	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_156655047.1\|3594792_3596160_-	PepSY domain-containing protein	NA	NA	NA	NA
WP_103181125.1\|3596213_3596540_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914145.1\|3596739_3597087_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_103180784.1\|3597128_3597896_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_103180785.1\|3597926_3598463_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_003863133.1\|3598481_3598730_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_103180786.1\|3598982_3600344_-	signal recognition particle protein	NA	NA	NA	NA
WP_103180787.1\|3600510_3601302_+	inner membrane protein YpjD	NA	NA	NA	NA
WP_156655048.1\|3601320_3602607_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_139156362.1\|3602660_3603254_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_103180790.1\|3603375_3604254_+	NAD(+) kinase	NA	NA	NA	NA
WP_114317036.1\|3604339_3606001_+	DNA repair protein RecN	NA	NA	NA	NA
WP_103180792.1\|3606152_3606494_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_156655509.1\|3606589_3606862_-	RnfH family protein	NA	NA	NA	NA
WP_103180794.1\|3606866_3607343_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_103180795.1\|3607460_3607943_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	8.9e-29	46.2
3608353:3608398	attL	NA	NA	NA	NA
WP_156655049.1\|3608513_3608729_-	late control protein B	Q53ZE7	Salmonella_virus	7.9e-22	69.4
WP_156655050.1\|3608798_3609896_-	phage late control D family protein	E5G6Q3	Salmonella_phage	4.5e-177	85.0
WP_156655051.1\|3609892_3610378_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	8.5e-64	92.4
WP_156655052.1\|3610374_3613449_-\|tail	phage tail tape measure protein	A0A1S6L010	Salmonella_phage	0.0e+00	76.6
WP_007848878.1\|3613441_3613561_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	3.3e-14	92.3
WP_156655053.1\|3613575_3613878_-\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	4.4e-42	94.0
WP_156655054.1\|3613932_3614448_-\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	9.6e-90	95.3
WP_059307183.1\|3614457_3615630_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.6e-209	92.6
WP_156655055.1\|3615830_3616292_-\|tail	tail fiber assembly protein	A0A0F7LDZ0	Escherichia_phage	1.0e-13	51.4
WP_156655056.1\|3619238_3619760_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.1e-59	61.8
WP_059307179.1\|3619752_3620661_-\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	7.1e-120	77.2
WP_059307178.1\|3620647_3621007_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.5e-52	89.1
WP_156655057.1\|3621003_3621582_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	2.6e-99	90.6
WP_156655510.1\|3621664_3622561_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	1.4e-75	48.1
WP_156655058.1\|3622550_3623000_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	5.7e-62	81.1
WP_156655059.1\|3622992_3623424_-\|tail	phage tail protein	E5G6N3	Salmonella_phage	7.1e-70	91.6
WP_156655060.1\|3623519_3623945_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	3.0e-65	94.3
WP_156655061.1\|3623944_3624322_-	peptidase	A0A1S6KZZ2	Salmonella_phage	4.1e-29	56.8
WP_156655062.1\|3624326_3624836_-	glycoside hydrolase family protein	E5G6N1	Salmonella_phage	9.9e-71	75.1
WP_039029573.1\|3624816_3625032_-	membrane protein	E5G6N0	Salmonella_phage	1.0e-29	90.1
WP_039029574.1\|3625035_3625239_-\|tail	tail protein X	E5G6M9	Salmonella_phage	4.2e-33	97.0
WP_156655063.1\|3625238_3625703_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.2e-78	91.6
WP_156655064.1\|3625796_3626447_-	hypothetical protein	A0A1S6KZX1	Salmonella_phage	1.2e-110	95.8
WP_156655065.1\|3626450_3627512_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	3.2e-188	94.6
WP_156655066.1\|3627528_3628362_-\|capsid	capsid protein	A0A1S6KZW9	Salmonella_phage	5.0e-120	89.5
WP_156655067.1\|3628504_3630271_+	oxidoreductase	A0A1S6KZW3	Salmonella_phage	0.0e+00	95.6
WP_109866361.1\|3630270_3631320_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	1.6e-176	90.2
WP_109866360.1\|3631372_3632044_-	hypothetical protein	NA	NA	NA	NA
WP_152159316.1\|3632403_3633198_-	hypothetical protein	NA	NA	NA	NA
WP_152159315.1\|3633201_3633402_-	hypothetical protein	NA	NA	NA	NA
WP_152159314.1\|3633619_3633853_-	DinI-like family protein	A0A1S6L014	Salmonella_phage	3.0e-30	84.4
WP_152159313.1\|3633863_3634052_-	hypothetical protein	A0A1S6L006	Salmonella_phage	1.0e-25	96.8
WP_156655068.1\|3634206_3636600_-	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.5
WP_156655069.1\|3636596_3637448_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	E5G6L8	Salmonella_phage	3.4e-116	70.9
WP_156655070.1\|3637444_3637672_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	1.9e-21	66.7
WP_156655071.1\|3637671_3637905_-	DUF2732 family protein	A0A1S6L021	Salmonella_phage	2.7e-23	77.9
WP_156655072.1\|3637972_3638314_-	hypothetical protein	E5G6L5	Salmonella_phage	5.1e-47	83.2
WP_156655073.1\|3638277_3638478_-	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	2.6e-27	87.7
WP_156655074.1\|3638485_3638995_-	hypothetical protein	A0A1S6L008	Salmonella_phage	3.0e-83	91.7
WP_057060132.1\|3639027_3639270_-	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	5.2e-38	96.2
WP_156655075.1\|3639389_3640022_+	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	3.4e-105	91.0
WP_156655076.1\|3640023_3641040_+\|integrase	tyrosine-type recombinase/integrase	A0A1S6L016	Salmonella_phage	2.0e-187	92.3
WP_156655077.1\|3641053_3642022_+	hypothetical protein	NA	NA	NA	NA
WP_156655078.1\|3642438_3643359_+	hypothetical protein	NA	NA	NA	NA
3642228:3642273	attR	NA	NA	NA	NA
WP_156655079.1\|3643764_3644154_-	LexA family transcriptional regulator	Q6UAV9	Klebsiella_phage	4.5e-47	67.4
WP_156655080.1\|3644153_3644393_-	hypothetical protein	K7P7N3	Enterobacteria_phage	2.6e-29	73.4
WP_156655081.1\|3645470_3646490_-	hypothetical protein	O64338	Escherichia_phage	1.2e-43	48.5
WP_156655082.1\|3646480_3646783_-	hypothetical protein	NA	NA	NA	NA
WP_156655083.1\|3646782_3648462_-	hypothetical protein	A0A0F7L427	uncultured_marine_virus	2.0e-27	37.2
WP_156655084.1\|3648526_3653452_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	59.7
WP_156655085.1\|3653504_3654104_-\|tail	tail assembly protein	K7PM97	Enterobacterial_phage	3.1e-79	77.0
WP_156655086.1\|3654157_3654496_-	hypothetical protein	Q6UAW3	Klebsiella_phage	1.5e-19	45.5
WP_156655087.1\|3654519_3655230_-	peptidase P60	K7PGV2	Enterobacterial_phage	2.4e-131	86.9
WP_156655088.1\|3655231_3655987_-\|tail	phage minor tail protein L	K7PKU0	Enterobacteria_phage	2.6e-128	87.3
WP_156655089.1\|3655983_3656331_-\|tail	phage tail protein	K7P7G7	Enterobacteria_phage	4.4e-38	67.0
WP_156655090.1\|3656330_3658835_-\|tail	phage tail tape measure protein	K7PKR0	Enterobacteria_phage	1.0e-293	66.0
WP_156655091.1\|3658815_3659124_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.5e-21	53.1
WP_156655092.1\|3659144_3659567_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	9.5e-19	40.9
WP_156655093.1\|3659596_3660334_-\|tail	phage tail protein	M9NYX0	Enterobacteria_phage	1.5e-96	72.7
WP_156655094.1\|3660341_3660740_-\|tail	phage tail protein	K7PHM6	Enterobacterial_phage	8.0e-44	63.6
WP_097455164.1\|3660736_3661291_-\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	1.5e-43	62.7
WP_156655095.1\|3661301_3661577_-	ATP-binding protein	NA	NA	NA	NA
WP_156655096.1\|3661569_3661893_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	6.3e-23	53.3
WP_156655097.1\|3661973_3663971_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	86.0
WP_156655098.1\|3663915_3665421_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	6.3e-214	73.1
WP_156655099.1\|3665417_3665639_-	hypothetical protein	A5LH28	Enterobacteria_phage	2.5e-18	67.6
WP_156655100.1\|3665635_3667738_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	77.2
WP_097455171.1\|3667737_3668226_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	4.9e-67	79.6
WP_156655101.1\|3668413_3668719_-	hypothetical protein	NA	NA	NA	NA
WP_156653759.1\|3668754_3669875_-\|transposase	IS3-like element ISSen4 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.4
WP_156655102.1\|3670089_3671079_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.1e-131	66.3
WP_156655103.1\|3671075_3671762_-	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	1.2e-58	54.2
WP_156655104.1\|3671777_3672164_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-56	81.4
WP_156655511.1\|3672160_3672466_-	LexA family transcriptional regulator	S5FXP5	Shigella_phage	2.9e-17	50.5
WP_156655105.1\|3672477_3673707_-	phage N-6-adenine-methyltransferase	K7PGU4	Enterobacteria_phage	5.6e-104	77.9
WP_156655106.1\|3673703_3674168_-	PerC family transcriptional regulator	U5P0U0	Shigella_phage	8.9e-10	28.6
WP_156655107.1\|3674164_3674926_-	helix-turn-helix domain-containing protein	Q8HA96	Salmonella_phage	2.1e-64	60.3
WP_156655108.1\|3674879_3675098_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.5e-15	68.4
WP_156655109.1\|3675261_3675813_-	DNA-binding protein	S5FXP0	Shigella_phage	4.1e-62	61.2
WP_156655110.1\|3675841_3676051_-	cell division protein	NA	NA	NA	NA
WP_156655111.1\|3676148_3676796_+	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	8.2e-38	40.2
WP_156655112.1\|3677142_3677631_-	hypothetical protein	NA	NA	NA	NA
WP_156655113.1\|3678960_3680133_+	DUF3596 domain-containing protein	I6PDJ1	Cronobacter_phage	7.2e-149	68.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046557

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection