CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP046607	Burkholderia contaminans strain XL73 chromosome 1, complete sequence	0 crisprs	WYL	0	0	119
NZ_CP046609	Burkholderia contaminans strain XL73 chromosome 3, complete sequence	2 crisprs	WYL,cas3,DEDDh,csa3,Cas14u_CAS-V,DinG	0	1	2
NZ_CP046610	Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence	0 crisprs	csa3	0	0	1
NZ_CP046611	Burkholderia contaminans strain XL73 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0
NZ_CP046608	Burkholderia contaminans strain XL73 chromosome 2, complete sequence	4 crisprs	cas3,csa3,WYL,c2c9_V-U4,Cas14u_CAS-V,DinG	1	2	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 6759

Acidithiobacillus_phage(100.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_135370800.1\|1086_1950_-	hypothetical protein	NA	NA	NA	NA
WP_135370799.1\|2603_3440_+	hypothetical protein	NA	NA	NA	NA
WP_011875599.1\|4436_5993_+\|transposase	IS21-like element IS408 family transposase	K4I413	Acidithiobacillus_phage	1.4e-160	55.1
WP_006397350.1\|6009_6759_+	Insertion sequence IS408 ATP-binding protein	K4HZD4	Acidithiobacillus_phage	4.8e-82	60.7

DBSCAN-SWA_2

13935 : 14286

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039370807.1\|13935_14286_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.3e-16	38.5

DBSCAN-SWA_3

39332 : 43549

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082139458.1\|39332_40085_-	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	8.4e-10	30.6
WP_082139457.1\|40991_42098_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_039353638.1\|42151_43549_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	6.8e-21	28.6

DBSCAN-SWA_4

49484 : 52687

Pelagibacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157644907.1\|49484_51203_-	carbamoyltransferase	M1ICZ5	Pelagibacter_phage	8.3e-45	28.9
WP_039353624.1\|51199_52687_-	SPASM domain-containing protein	A0A1B2IA90	Erwinia_phage	3.4e-10	25.6

DBSCAN-SWA_5

64543 : 65320

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157644910.1\|64543_65320_-	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-13	29.9

DBSCAN-SWA_6

70875 : 71664

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012213993.1\|70875_71664_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	8.8e-34	34.1

DBSCAN-SWA_7

91616 : 93616

Micromonas_sp._RCC1109_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353545.1\|91616_92651_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	6.5e-45	32.0
WP_039353542.1\|92671_93616_-	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	2.1e-34	34.3

DBSCAN-SWA_8

99014 : 109567

Puniceispirillum_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046196578.1\|99014_100427_-	Rieske 2Fe-2S domain-containing protein	S4S2K9	Puniceispirillum_phage	6.7e-08	39.3
WP_039353529.1\|100438_100783_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_039353527.1\|100801_101641_-	protocatechuate 3,4-dioxygenase	NA	NA	NA	NA
WP_039353525.1\|101655_101952_-	extradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_046196588.1\|101956_102778_-	alpha/beta fold hydrolase	A0A1L7N183	Ralstonia_phage	3.3e-07	23.5
WP_046196579.1\|102960_103563_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_039369308.1\|103632_104286_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_039369287.1\|105370_106255_-	alpha/beta fold hydrolase	G1DB77	Mycobacterium_phage	4.9e-09	41.0
WP_039369305.1\|106269_107523_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA
WP_039369285.1\|107581_108601_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	2.9e-45	33.5
WP_039369281.1\|108619_109567_-	acetaldehyde dehydrogenase (acetylating)	G9E526	Ostreococcus_lucimarinus_virus	9.6e-35	34.2

DBSCAN-SWA_9

115618 : 116476

Tetraselmis_viridis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046196580.1\|115618_116476_+	phage Gp37/Gp68 family protein	M4R142	Tetraselmis_viridis_virus	1.3e-62	47.6

DBSCAN-SWA_10

141479 : 142175

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039369209.1\|141479_142175_+	ParA family protein	K7R2R7	Vibrio_phage	7.5e-21	30.9

DBSCAN-SWA_11

148751 : 150050

Megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039372257.1\|148751_150050_+	adenylosuccinate synthase	A0A2P1EKE7	Megavirus	6.5e-58	33.8

DBSCAN-SWA_12

154313 : 158777

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046196744.1\|154313_155570_+	efflux RND transporter periplasmic adaptor subunit	S5VL44	Leptospira_phage	8.0e-05	24.3
WP_039360662.1\|155585_158777_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.5e-44	22.9

DBSCAN-SWA_13

167950 : 169306

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362829.1\|167950_169306_-	uracil-xanthine permease	Q9KX94	Enterobacteria_phage	1.3e-16	29.1

DBSCAN-SWA_14

175423 : 176194

Agrobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362813.1\|175423_176194_+	hypothetical protein	A0A2L0V0Z6	Agrobacterium_phage	1.1e-07	33.0

DBSCAN-SWA_15

182458 : 182983

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021161966.1\|182458_182983_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A1B1IUF0	uncultured_Mediterranean_phage	1.3e-44	53.7

DBSCAN-SWA_16

192600 : 194430

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039343159.1\|192600_194430_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.6e-12	42.4

DBSCAN-SWA_17

197629 : 202073

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039343176.1\|197629_199297_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	7.0e-81	40.1
WP_039343179.1\|199319_200087_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA
WP_039343181.1\|200105_201296_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_039343184.1\|201419_202073_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.6e-11	35.8

DBSCAN-SWA_18

221255 : 222572

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039343229.1\|221255_222572_+	thymidine phosphorylase	A0A0H3UZD4	Geobacillus_virus	7.2e-73	39.9

DBSCAN-SWA_19

232516 : 234472

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095145700.1\|232516_234472_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	4.0e-43	28.4

DBSCAN-SWA_20

258168 : 258840

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039341390.1\|258168_258840_+	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	1.4e-19	28.7

DBSCAN-SWA_21

292315 : 300962

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039341293.1\|292315_293908_-	response regulator	W8CYF6	Bacillus_phage	6.6e-20	26.4
WP_039341376.1\|294166_294535_+	hypothetical protein	NA	NA	NA	NA
WP_039341290.1\|294722_295613_+	BON domain-containing protein	NA	NA	NA	NA
WP_039341287.1\|295958_296474_+	hypothetical protein	NA	NA	NA	NA
WP_046196858.1\|296629_297412_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.7e-08	24.7
WP_039341284.1\|297402_298014_+	HAD-IIIA family hydrolase	NA	NA	NA	NA
WP_039341281.1\|298010_299213_+	glycosyltransferase family 9 protein	NA	NA	NA	NA
WP_039341278.1\|299216_300962_+	carbamoyltransferase	A0A1B1ITZ5	uncultured_Mediterranean_phage	3.1e-47	29.8

DBSCAN-SWA_22

308474 : 311868

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371355.1\|308474_310790_+	PAS domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	4.6e-22	25.4
WP_039371388.1\|310821_311868_-	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	5.9e-78	44.5

DBSCAN-SWA_23

315955 : 320127

Trichoplusia_ni_ascovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371341.1\|315955_316813_+	glucose 1-dehydrogenase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	2.3e-51	42.8
WP_039371338.1\|316847_317453_+	DUF4142 domain-containing protein	NA	NA	NA	NA
WP_039371335.1\|317510_318119_+	DUF892 family protein	NA	NA	NA	NA
WP_039371332.1\|318190_319471_-	divalent metal cation transporter	NA	NA	NA	NA
WP_046196867.1\|319467_320127_-	UdgX family uracil-DNA binding protein	A0A127AW33	Bacillus_phage	2.2e-14	29.4

DBSCAN-SWA_24

324126 : 324558

Macacine_betaherpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371315.1\|324126_324558_-	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	5.0e-15	37.1

DBSCAN-SWA_25

327825 : 336057

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371289.1\|327825_329931_+	catalase HPII	A0A2K9L0T1	Tupanvirus	2.0e-141	49.5
WP_039371286.1\|329943_330447_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_039371283.1\|330483_331491_+	Ku protein	NA	NA	NA	NA
WP_039371280.1\|331515_334260_+	DNA ligase D	A0A068CDF3	Rhizobium_phage	2.7e-53	39.9
WP_039371277.1\|334440_334863_+	hypothetical protein	NA	NA	NA	NA
WP_039371274.1\|334932_335307_+	DUF3022 domain-containing protein	NA	NA	NA	NA
WP_039371378.1\|335508_336057_+	type 1 glutamine amidotransferase	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	1.4e-17	35.0

DBSCAN-SWA_26

346934 : 348548

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046196863.1\|346934_348548_+	tryptophan 7-halogenase	A0A1Z1LWL6	Synechococcus_phage	7.8e-61	33.8

DBSCAN-SWA_27

361369 : 362929

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371225.1\|361369_362929_+	D-xylose ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.6e-10	28.9

DBSCAN-SWA_28

367976 : 373237

Planktothrix_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371203.1\|367976_368741_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.0e-26	36.1
WP_039371201.1\|368820_370191_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.9e-12	23.2
WP_039371365.1\|370205_371795_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA
WP_007182917.1\|372244_373237_-\|transposase	IS5-like element ISBmu23 family transposase	E5E3P6	Burkholderia_phage	1.3e-186	100.0

DBSCAN-SWA_29

376479 : 377970

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355996.1\|376479_377970_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.7e-07	24.9

DBSCAN-SWA_30

387610 : 391609

Trichoplusia_ni_ascovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356016.1\|387610_388423_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.3e-05	26.1
WP_039356019.1\|388438_389476_+	exo-alpha-sialidase	NA	NA	NA	NA
WP_039356023.1\|389488_390004_+	glyoxalase	NA	NA	NA	NA
WP_039356026.1\|390052_390658_+	amino acid synthesis family protein	NA	NA	NA	NA
WP_039356029.1\|390664_391609_+	alpha/beta hydrolase	G9VYU4	Mycobacterium_phage	6.0e-05	37.3

DBSCAN-SWA_31

399358 : 400723

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356045.1\|399358_400723_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	3.0e-21	23.3

DBSCAN-SWA_32

408040 : 409585

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356058.1\|408040_409585_+	sugar ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.7e-15	28.3

DBSCAN-SWA_33

419822 : 424726

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356092.1\|419822_421409_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	4.8e-15	34.5
WP_039356095.1\|421549_423070_-	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA
WP_039356098.1\|423430_424726_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.4e-59	35.8

DBSCAN-SWA_34

445322 : 446804

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356138.1\|445322_446804_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	6.7e-35	31.8

DBSCAN-SWA_35

454453 : 455992

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356168.1\|454453_455992_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-07	31.5

DBSCAN-SWA_36

460291 : 462178

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356177.1\|460291_462178_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	6.8e-16	32.3

DBSCAN-SWA_37

472129 : 474595

Apis_mellifera_filamentous_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039356243.1\|472129_472804_+	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	5.2e-11	29.3
WP_039356244.1\|473500_474595_+	glycosyl hydrolase	M1HYL5	Paramecium_bursaria_Chlorella_virus	2.2e-11	25.6

DBSCAN-SWA_38

485669 : 489274

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353444.1\|485669_486698_-	TIGR00730 family Rossman fold protein	F4YCQ1	Synechococcus_phage	1.8e-10	40.6
WP_039353442.1\|486719_487055_-	cytochrome c	NA	NA	NA	NA
WP_039353440.1\|487107_488109_-	nitroreductase	NA	NA	NA	NA
WP_039353437.1\|488284_489274_+	zinc-dependent alcohol dehydrogenase family protein	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	4.1e-20	31.9

DBSCAN-SWA_39

494510 : 500662

uncultured_Caudovirales_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353420.1\|494510_495350_-	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	9.1e-05	34.8
WP_039353418.1\|495503_496040_+	hypothetical protein	NA	NA	NA	NA
WP_039353417.1\|496029_496776_+	beta-ketoacyl-ACP reductase	A0A0K0KVL6	Prochlorococcus_phage	2.8e-05	25.9
WP_039353416.1\|496772_498587_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_039353414.1\|498583_499576_+	bifunctional enoyl-CoA hydratase/phosphate acetyltransferase	NA	NA	NA	NA
WP_039353412.1\|499621_500662_+	zinc-dependent alcohol dehydrogenase family protein	E3SJ82	Synechococcus_phage	1.3e-16	27.1

DBSCAN-SWA_40

504441 : 507276

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353398.1\|504441_507276_-	ribosome-associated ATPase/putative transporter RbbA	G3M9Y6	Bacillus_virus	4.6e-16	28.5

DBSCAN-SWA_41

511756 : 515494

Bathycoccus_sp._RCC1105_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046196875.1\|511756_513670_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQU5	Bathycoccus_sp._RCC1105_virus	5.5e-106	43.8
WP_039353382.1\|513700_515494_-	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	M4QT32	Loktanella_phage	1.0e-93	37.4

DBSCAN-SWA_42

524602 : 530901

Planktothrix_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353363.1\|524602_525394_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.1e-31	38.3
WP_039353360.1\|525401_526895_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	1.5e-50	34.0
WP_039353358.1\|526951_527707_+	histidine utilization repressor	NA	NA	NA	NA
WP_039353356.1\|527809_529144_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_046196877.1\|529173_530901_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-15	31.6

DBSCAN-SWA_43

543489 : 550270

Acanthamoeba_polyphaga_mimivirus(25.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353328.1\|543489_544473_+	alpha/beta hydrolase	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	9.9e-27	32.7
WP_082139480.1\|544809_546300_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_039353323.1\|546332_547283_+	alpha/beta hydrolase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	1.3e-36	32.6
WP_039353320.1\|547505_549134_+\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	1.7e-63	31.5
WP_039353317.1\|549580_550270_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-23	30.7

DBSCAN-SWA_44

577209 : 582260

Hepacivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353274.1\|577209_578832_+	AMP-binding protein	Q75ZG1	Hepacivirus	5.6e-43	28.9
WP_039353272.1\|579068_582260_-	cytochrome P450	V5UQK0	Mycobacterium_phage	1.8e-69	34.1

DBSCAN-SWA_45

586571 : 587291

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353478.1\|586571_587291_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.5e-32	34.1

DBSCAN-SWA_46

590292 : 591927

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353239.1\|590292_591927_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	3.1e-33	29.3

DBSCAN-SWA_47

595697 : 598841

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353229.1\|595697_598841_-	multidrug efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.5e-52	21.7

DBSCAN-SWA_48

607488 : 608409

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039353211.1\|607488_608409_-	L-proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	3.4e-29	28.6

DBSCAN-SWA_49

617911 : 620272

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052760070.1\|617911_620272_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.0e-36	26.2

DBSCAN-SWA_50

645665 : 646436

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362621.1\|645665_646436_+	DNA-binding transcriptional repressor DeoR	A0A077SK06	Escherichia_phage	3.5e-19	31.6

DBSCAN-SWA_51

650697 : 654884

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362629.1\|650697_651375_+	heavy metal response regulator transcription factor	W8CYM9	Bacillus_phage	9.9e-34	35.2
WP_039362631.1\|651371_652832_+	heavy metal sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-20	27.4
WP_046197074.1\|653063_654884_-	asparagine synthase (glutamine-hydrolyzing)	A0A0G2Y369	Acanthamoeba_polyphaga_mimivirus	1.9e-23	25.8

DBSCAN-SWA_52

659205 : 662454

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362636.1\|659205_662454_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.9e-58	23.0

DBSCAN-SWA_53

667980 : 668730

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362646.1\|667980_668730_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-32	42.2

DBSCAN-SWA_54

698427 : 702319

Acinetobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362674.1\|698427_698928_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	1.8e-08	27.9
WP_039362676.1\|698924_700211_-	cytochrome c	NA	NA	NA	NA
WP_039362765.1\|700548_700821_-	UBP-type zinc finger domain-containing protein	NA	NA	NA	NA
WP_039362677.1\|701047_702319_+	NAD(P)/FAD-dependent oxidoreductase	A0A2I2L5E1	Orpheovirus	9.8e-27	29.9

DBSCAN-SWA_55

706573 : 707554

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362683.1\|706573_707554_-	alpha/beta hydrolase	A0A286MQ79	Mycobacterium_phage	8.7e-15	27.7

DBSCAN-SWA_56

723529 : 724366

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362703.1\|723529_724366_+	alpha/beta hydrolase	A0A249XU20	Mycobacterium_phage	1.1e-07	27.1

DBSCAN-SWA_57

739045 : 741220

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046197080.1\|739045_741220_-	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.7e-39	28.3

DBSCAN-SWA_58

775786 : 778633

Agrobacterium_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039342435.1\|775786_778633_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A223W0B1	Agrobacterium_phage	2.1e-122	35.6

DBSCAN-SWA_59

789828 : 790989

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371518.1\|789828_790989_-	NAD-dependent formate dehydrogenase	A0A1B1IVB5	uncultured_Mediterranean_phage	4.2e-16	25.7

DBSCAN-SWA_60

796580 : 798887

Ectocarpus_siliculosus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371541.1\|796580_798887_+	PAS domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	4.9e-24	27.1

DBSCAN-SWA_61

803642 : 803999

Sinorhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371561.1\|803642_803999_-	DUF3175 domain-containing protein	A0A0F6TH17	Sinorhizobium_phage	5.5e-20	57.3

DBSCAN-SWA_62

827407 : 828184

Trichoplusia_ni_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371603.1\|827407_828184_-	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	9.0e-23	35.2

DBSCAN-SWA_63

833100 : 834237

Oenococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371611.1\|833100_834237_+	muconate cycloisomerase	Q6A202	Oenococcus_phage	7.5e-10	23.5

DBSCAN-SWA_64

838268 : 839039

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371625.1\|838268_839039_+	1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase	W8CYX9	Bacillus_phage	4.9e-05	45.8

DBSCAN-SWA_65

846113 : 846950

Pelagibacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371656.1\|846113_846950_+	spermidine synthase	M1ICM1	Pelagibacter_phage	3.7e-06	33.0

DBSCAN-SWA_66

858384 : 859374

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371687.1\|858384_859374_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.8e-34	43.3

DBSCAN-SWA_67

874230 : 874689

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371974.1\|874230_874689_-	(2Fe-2S)-binding protein	A0A0P0IVM8	Acinetobacter_phage	1.1e-07	31.3

DBSCAN-SWA_68

888762 : 892373

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371976.1\|888762_889800_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.4e-10	24.9
WP_039371732.1\|889882_890626_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_039371734.1\|890831_892373_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	6.8e-14	26.2

DBSCAN-SWA_69

901846 : 907506

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371755.1\|901846_903577_+	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.6e-14	35.8
WP_046197096.1\|903611_904127_+	hypothetical protein	NA	NA	NA	NA
WP_046197097.1\|904227_904776_+	hypothetical protein	NA	NA	NA	NA
WP_052760063.1\|904772_905177_+	hypothetical protein	NA	NA	NA	NA
WP_157644918.1\|905561_905879_-	hypothetical protein	NA	NA	NA	NA
WP_039371761.1\|905937_907506_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.6e-13	37.2

DBSCAN-SWA_70

932341 : 939149

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076841483.1\|932341_934153_-	amino acid ABC transporter permease/ATP-binding protein	G9BWD6	Planktothrix_phage	3.3e-28	36.3
WP_039372021.1\|934152_935475_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_039371798.1\|935518_936520_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_039371802.1\|936671_939149_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	1.4e-16	33.2

DBSCAN-SWA_71

944057 : 945755

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371815.1\|944057_945755_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-16	32.9

DBSCAN-SWA_72

963656 : 964496

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371858.1\|963656_964496_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.5e-27	37.6

DBSCAN-SWA_73

984724 : 987339

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371894.1\|984724_985486_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.2e-29	35.5
WP_082139470.1\|985587_987339_+	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	4.2e-12	23.1

DBSCAN-SWA_74

1002464 : 1003466

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371915.1\|1002464_1003466_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.6e-24	27.7

DBSCAN-SWA_75

1007894 : 1012575

Aeromonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039371920.1\|1007894_1009190_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	6.2e-101	53.5
WP_039371921.1\|1009366_1010248_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_039371928.1\|1010401_1011289_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA
WP_039371930.1\|1011285_1012575_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-25	37.4

DBSCAN-SWA_76

1018692 : 1019262

Morganella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039370025.1\|1018692_1019262_-	lipocalin family protein	A0A1W6JNX6	Morganella_phage	2.9e-18	43.1

DBSCAN-SWA_77

1025800 : 1030024

Orpheovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039370001.1\|1025800_1027018_+	class I SAM-dependent methyltransferase	A0A2I2L5L3	Orpheovirus	1.0e-33	34.1
WP_039369997.1\|1027019_1027553_+	hypothetical protein	NA	NA	NA	NA
WP_009687752.1\|1027647_1027818_+	DUF2256 domain-containing protein	NA	NA	NA	NA
WP_039369993.1\|1028377_1029193_+	hypothetical protein	NA	NA	NA	NA
WP_039369991.1\|1029292_1030024_+	GTP cyclohydrolase	A0A1C3NFQ1	Phage_NCTB	3.6e-58	48.9

DBSCAN-SWA_78

1033610 : 1040007

Indivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039369980.1\|1033610_1035140_-	cryptochrome/photolyase family protein	A0A1V0SE91	Indivirus	2.6e-50	28.7
WP_039369977.1\|1035420_1036392_+	MerR family transcriptional regulator	Q9EYF2	Enterobacteria_phage	3.9e-07	38.6
WP_039369974.1\|1036477_1037437_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_052760054.1\|1037794_1038412_+	DUF2878 domain-containing protein	NA	NA	NA	NA
WP_039369971.1\|1038486_1040007_+	deoxyribodipyrimidine photo-lyase	A0A1V0SGL1	Hokovirus	1.7e-49	27.8

DBSCAN-SWA_79

1045526 : 1053502

uncultured_virus(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039369948.1\|1045526_1046090_+	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	5.2e-12	31.7
WP_039370038.1\|1046267_1046522_-	hypothetical protein	NA	NA	NA	NA
WP_039369946.1\|1046632_1048255_-	chaperonin GroEL	A0A240F779	uncultured_virus	2.3e-174	60.6
WP_039369943.1\|1048332_1048650_-	co-chaperone GroES	A0A221S322	uncultured_virus	2.5e-16	46.2
WP_039369940.1\|1049015_1051346_-	EAL domain-containing protein	G3MA91	Bacillus_virus	4.9e-16	36.1
WP_039369938.1\|1051399_1053502_-	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	4.5e-08	30.2

DBSCAN-SWA_80

1058747 : 1060046

Leuconostoc_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355552.1\|1058747_1059278_+	toxin	A0A097BYE2	Leuconostoc_phage	1.0e-06	26.0
WP_039355550.1\|1059296_1060046_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	4.9e-18	31.3

DBSCAN-SWA_81

1065898 : 1066705

Feldmannia_irregularis_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355578.1\|1065898_1066705_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	3.0e-05	25.0

DBSCAN-SWA_82

1070980 : 1072228

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355542.1\|1070980_1072228_+	carboxymethylenebutenolidase	S4VS37	Pandoravirus	1.7e-10	30.9

DBSCAN-SWA_83

1075927 : 1077871

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082139468.1\|1075927_1077871_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	2.3e-51	29.0

DBSCAN-SWA_84

1102587 : 1103631

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355479.1\|1102587_1103631_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	6.7e-90	56.8

DBSCAN-SWA_85

1108422 : 1109856

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355470.1\|1108422_1109856_+	MFS transporter	A0A0M3UL24	Mycobacterium_phage	7.7e-28	31.3

DBSCAN-SWA_86

1115544 : 1121630

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355462.1\|1115544_1116747_+	AAA domain-containing protein	A0A1D7RMM0	Synechococcus_phage	4.2e-19	30.8
WP_039355460.1\|1116751_1118455_+	cobalamin biosynthesis protein CobT	A0A2H4P735	Pseudomonas_phage	2.4e-20	30.0
WP_039355458.1\|1118710_1119814_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_039355456.1\|1119860_1121630_-	histidine kinase	B5LWN8	Feldmannia_species_virus	1.9e-07	29.6

DBSCAN-SWA_87

1125827 : 1126451

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355445.1\|1125827_1126451_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.5e-09	28.2

DBSCAN-SWA_88

1131745 : 1135520

Burkholderia_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355438.1\|1131745_1132651_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	6.4e-20	32.9
WP_039355435.1\|1132817_1133360_+	hypothetical protein	NA	NA	NA	NA
WP_039355433.1\|1133366_1133693_+	hypothetical protein	NA	NA	NA	NA
WP_039355431.1\|1133711_1134557_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_039355429.1\|1134773_1135520_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	7.6e-19	31.0

DBSCAN-SWA_89

1138557 : 1139106

Turkeypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355423.1\|1138557_1139106_-	glutathione peroxidase	A0A0M5HSM9	Turkeypox_virus	3.6e-10	31.1

DBSCAN-SWA_90

1145893 : 1151994

Escherichia_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012213993.1\|1145893_1146682_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	8.8e-34	34.1
WP_080001177.1\|1148049_1149318_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	3.5e-40	43.9
WP_046197119.1\|1149823_1150138_-	hypothetical protein	NA	NA	NA	NA
WP_046547012.1\|1150340_1150556_+	hypothetical protein	NA	NA	NA	NA
WP_039360429.1\|1150968_1151994_+	phosphate ABC transporter substrate-binding protein PstS	M4QHS4	Cyanophage	1.0e-45	36.9

DBSCAN-SWA_91

1155746 : 1157243

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076841477.1\|1155746_1157243_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.2e-53	34.2

DBSCAN-SWA_92

1167912 : 1173807

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355657.1\|1167912_1173807_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.5e-191	38.6

DBSCAN-SWA_93

1178636 : 1180397

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355677.1\|1178636_1180397_-	cytochrome c oxidase subunit I	R9VX24	Flavobacterium_phage	9.8e-33	49.3

DBSCAN-SWA_94

1184317 : 1185259

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355688.1\|1184317_1185259_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.1e-14	27.8

DBSCAN-SWA_95

1192969 : 1204861

Feldmannia_irregularis_virus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355697.1\|1192969_1193806_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	5.7e-07	26.2
WP_039355700.1\|1193798_1196147_+	sensor histidine kinase	A0A1V0SGX0	Hokovirus	1.3e-19	32.4
WP_039355702.1\|1196285_1197374_-	sugar ABC transporter permease YjfF	NA	NA	NA	NA
WP_039355704.1\|1197370_1198411_-	ABC transporter permease	NA	NA	NA	NA
WP_039355706.1\|1198407_1199922_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.2e-16	25.5
WP_039355709.1\|1199996_1200959_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_157644920.1\|1201213_1201501_-	hypothetical protein	NA	NA	NA	NA
WP_039355715.1\|1201612_1202659_+	DNA topoisomerase IB	A0A0G2Y4T8	Acanthamoeba_polyphaga_mimivirus	6.2e-43	32.7
WP_039355719.1\|1202943_1203252_-	H-NS histone family protein	NA	NA	NA	NA
WP_039355722.1\|1203382_1203616_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_039355724.1\|1203976_1204861_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.2e-69	46.2

DBSCAN-SWA_96

1208212 : 1211301

Edwardsiella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355732.1\|1208212_1209145_-	KpsF/GutQ family sugar-phosphate isomerase	A0A0B6VSY5	Edwardsiella_phage	5.4e-22	33.8
WP_039355735.1\|1209125_1209923_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_039355738.1\|1210455_1211301_-	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	5.5e-50	41.6

DBSCAN-SWA_97

1225044 : 1228608

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046543601.1\|1225044_1226514_+	glycine betaine/L-proline transporter ProP	Q6JIH2	Burkholderia_virus	1.0e-59	32.4
WP_039347895.1\|1226596_1227421_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_039347715.1\|1227615_1228608_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	2.0e-27	28.3

DBSCAN-SWA_98

1233267 : 1233978

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039347725.1\|1233267_1233978_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-29	42.5

DBSCAN-SWA_99

1243344 : 1244919

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039347762.1\|1243344_1244919_+	acyl-CoA ligase (AMP-forming), exosortase A system-associated	A0A2K9KZV5	Tupanvirus	6.3e-23	23.7

DBSCAN-SWA_100

1250903 : 1251917

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039347776.1\|1250903_1251917_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.7e-08	24.2

DBSCAN-SWA_101

1259180 : 1262541

Prochlorococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039347800.1\|1259180_1260002_-	SDR family NAD(P)-dependent oxidoreductase	A0A0K0KVL6	Prochlorococcus_phage	1.5e-07	28.9
WP_039347903.1\|1260255_1260798_+	hypothetical protein	NA	NA	NA	NA
WP_039347802.1\|1261461_1262541_+	linear amide C-N hydrolase	A0A2K9L5Y5	Tupanvirus	1.7e-19	28.6

DBSCAN-SWA_102

1266203 : 1267316

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039347812.1\|1266203_1267316_+	histidinol-phosphate transaminase	A0A1X7QHI1	Faustovirus	1.9e-10	25.3

DBSCAN-SWA_103

1278673 : 1279666

Burkholderia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007182917.1\|1278673_1279666_+\|transposase	IS5-like element ISBmu23 family transposase	E5E3P6	Burkholderia_phage	1.3e-186	100.0

DBSCAN-SWA_104

1287431 : 1288838

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362461.1\|1287431_1288838_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	8.9e-37	32.4

DBSCAN-SWA_105

1297776 : 1301640

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362441.1\|1297776_1298694_-	hypothetical protein	A0A218MNG2	uncultured_virus	5.8e-05	23.8
WP_039362438.1\|1299025_1299688_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_039362501.1\|1299811_1300792_+	YafY family transcriptional regulator	NA	NA	NA	NA
WP_039362436.1\|1300995_1301640_-	HD domain-containing protein	A0A146JEM2	Tokyovirus	3.0e-08	30.4

DBSCAN-SWA_106

1310181 : 1326053

Bacillus_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039362413.1\|1310181_1311036_+	ABC transporter permease	G3M9Y4	Bacillus_virus	2.5e-18	26.9
WP_039362411.1\|1311032_1311854_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.6e-25	34.3
WP_039362409.1\|1312061_1312592_-	OsmC family protein	NA	NA	NA	NA
WP_039362406.1\|1313067_1314633_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.1e-14	37.9
WP_039362402.1\|1314926_1315337_-	VOC family protein	NA	NA	NA	NA
WP_039362399.1\|1315426_1316164_-	formylglycine-generating enzyme family protein	A0A7F1	Microcystis_virus	1.4e-36	45.5
WP_039362396.1\|1317027_1317747_+	thioesterase	NA	NA	NA	NA
WP_039362393.1\|1317902_1318853_+	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	1.5e-83	48.6
WP_039362390.1\|1319060_1320371_+	diaminobutyrate--2-oxoglutarate transaminase family protein	A0A1V0SKB7	Klosneuvirus	5.2e-23	25.6
WP_039362498.1\|1320447_1321434_+	taurine catabolism dioxygenase TauD	NA	NA	NA	NA
WP_039362388.1\|1321625_1326053_+	type I polyketide synthase	D0R7J2	Paenibacillus_phage	9.3e-32	33.3

DBSCAN-SWA_107

1329369 : 1369930

Tupanvirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046543600.1\|1329369_1342803_+	hybrid non-ribosomal peptide synthetase/type I polyketide synthase	A0A2K9KZV5	Tupanvirus	2.0e-93	26.2
WP_039355055.1\|1342813_1344430_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_039355058.1\|1344417_1348338_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	2.6e-70	30.8
WP_076841474.1\|1348334_1357439_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.4e-69	20.1
WP_046543599.1\|1357526_1367021_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	7.8e-153	26.5
WP_039355063.1\|1367017_1367674_+	glycosyl transferase	A0A218MMA0	uncultured_virus	1.4e-21	28.7
WP_046196791.1\|1367727_1368210_+	hypothetical protein	NA	NA	NA	NA
WP_039355066.1\|1368226_1369930_+	cyclic peptide export ABC transporter	F2Y1V5	Organic_Lake_phycodnavirus	3.9e-10	25.2

DBSCAN-SWA_108

1390915 : 1392381

Cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355122.1\|1390915_1391617_-	ABC transporter ATP-binding protein	A0A1M7XV31	Cedratvirus	4.6e-10	28.7
WP_021160139.1\|1391613_1392381_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	8.9e-15	29.5

DBSCAN-SWA_109

1398272 : 1399670

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355140.1\|1398272_1399670_-	aspartate aminotransferase family protein	A0A2D1G879	Mycobacterium_phage	5.2e-13	34.2

DBSCAN-SWA_110

1411782 : 1414884

Streptomyces_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355167.1\|1411782_1413003_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.1e-14	43.5
WP_039355171.1\|1413081_1414884_-	ABC transporter ATP-binding protein/permease	G3M9Y6	Bacillus_virus	7.9e-14	30.3

DBSCAN-SWA_111

1421643 : 1424030

Brazilian_cedratvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355182.1\|1421643_1422633_+	D-2-hydroxyacid dehydrogenase	A0A2R8FDS8	Brazilian_cedratvirus	3.4e-19	33.6
WP_039355184.1\|1422722_1424030_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.2e-49	29.3

DBSCAN-SWA_112

1427845 : 1432111

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355193.1\|1427845_1428721_-	alpha/beta fold hydrolase	A0A1I9SAY0	Mycobacterium_phage	2.8e-12	30.5
WP_039355195.1\|1428790_1430047_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA
WP_039355196.1\|1430136_1431156_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	4.4e-46	32.0
WP_039355197.1\|1431169_1432111_-	acetaldehyde dehydrogenase (acetylating)	G9E526	Ostreococcus_lucimarinus_virus	1.0e-33	33.6

DBSCAN-SWA_113

1453220 : 1454186

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355223.1\|1453220_1454186_-	SDR family oxidoreductase	A0A1D8EQE2	Escherichia_phage	2.7e-08	24.3

DBSCAN-SWA_114

1461177 : 1462263

Enterobacteria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355286.1\|1461177_1462263_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.8e-19	28.4

DBSCAN-SWA_115

1473471 : 1479778

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052760046.1\|1473471_1475187_+	GAF domain-containing hybrid sensor histidine kinase/response regulator	A0A1V0SGX0	Hokovirus	1.3e-13	23.9
WP_039355306.1\|1475313_1476354_-	alpha/beta hydrolase	M1PGN2	Moumouvirus	1.8e-58	40.3
WP_039355308.1\|1476419_1476845_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_039355310.1\|1477069_1477636_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_039355312.1\|1477924_1479778_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.4e-31	27.3

DBSCAN-SWA_116

1487144 : 1489254

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039355327.1\|1487144_1488104_-	ABC transporter permease subunit	Q6GZ02	Mycoplasma_phage	3.7e-10	24.9
WP_046543598.1\|1488114_1489254_-	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.3e-25	33.5

DBSCAN-SWA_117

1499972 : 1504081

Pandoravirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039364494.1\|1499972_1503032_-	FAD-binding oxidoreductase	S4VRT3	Pandoravirus	5.1e-05	26.7
WP_039364496.1\|1503184_1504081_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	4.4e-21	28.9

DBSCAN-SWA_118

1524800 : 1532492

Burkholderia_phage(33.33%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007182917.1\|1524800_1525793_-\|transposase	IS5-like element ISBmu23 family transposase	E5E3P6	Burkholderia_phage	1.3e-186	100.0
WP_039364517.1\|1525903_1527601_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_012213993.1\|1528281_1529070_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	8.8e-34	34.1
WP_131753292.1\|1530301_1530673_+	hypothetical protein	NA	NA	NA	NA
WP_052760043.1\|1531460_1532492_-	hypothetical protein	Q332C0	Clostridium_botulinum_C_phage	1.9e-12	22.3

DBSCAN-SWA_119

1540185 : 1541214

Escherichia_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039364530.1\|1540185_1541214_+\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	7.3e-73	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP046609

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046609_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046609_1

941042-941134

Orphan

Consensus_repeat	Method
CACTCGGCAACCTCGGCGGCTCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046609_1

>merge|NZ_CP046609|1|941042-941134|CRISPRCasFinder
CACTCGGCAACCTCGGCGGCTCGAGTCCGCTGGCCCCGGTACAGGGCGTCGTGAACCAGGTGGTCGGCACGCTCGGCAACCTCGGCGGCTCGA

>NZ_CP046609|1|1|941042-941134|CRISPRCasFinder
CACTCGGCAACCTCGGCGGCTCGA	GTCCGCTGGCCCCGGTACAGGGCGTCGTGAACCAGGTGGTCGGCA
CGCTCGGCAACCTCGGCGGCTCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046609.1\|WP_039361532.1\|943648_944068_+\|quinol-oxidase	unknown	unknown	gnl\|CDD\|259885
NZ_CP046609.1\|WP_039361190.1\|935923_936703_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270421
NZ_CP046609.1\|WP_039361173.1\|945303_946353_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP046609.1\|WP_039361188.1\|936770_938015_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223737
NZ_CP046609.1\|WP_039361534.1\|942313_942829_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237123
NZ_CP046609.1\|WP_039361197.1\|931272_932712_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP046609.1\|WP_039361536.1\|925444_927535_+\|cytochrome-c1	unknown	unknown	gnl\|CDD\|313759
NZ_CP046609.1\|WP_039361192.1\|934569_935544_-\|ornithine-cyclodeaminase-family-protein	unknown	unknown	gnl\|CDD\|225280
NZ_CP046609.1\|WP_039361200.1\|928148_929984_+\|peptidase-S1	unknown	unknown	gnl\|CDD\|225490
NZ_CP046609.1\|WP_039361175.1\|944741_945257_+\|polyketide-cyclase	unknown	unknown	gnl\|CDD\|176866
NZ_CP046609.1\|WP_039361181.1\|942825_943608_+\|anti-sigma-factor	unknown	unknown	gnl\|CDD\|227949
NZ_CP046609.1\|WP_039361202.1\|924942_925308_+\|BON-domain-containing-protein	unknown	unknown	gnl\|CDD\|335963
NZ_CP046609.1\|WP_039361169.1\|946381_947980_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP046609.1\|WP_039361196.1\|932850_933582_-\|DsbA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|239322
NZ_CP046609.1\|WP_039361199.1\|930141_930930_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|376667
NZ_CP046609.1\|WP_039361164.1\|949082_950387_-\|deferrochelatase/peroxidase-EfeB	unknown	unknown	gnl\|CDD\|273606
NZ_CP046609.1\|WP_039361194.1\|933778_934573_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225512
NZ_CP046609.1\|WP_039361178.1\|944064_944697_+\|DUF1571-domain-containing-protein	unknown	unknown	gnl\|CDD\|377879
NZ_CP046609.1\|WP_039361183.1\|941919_942279_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226765
NZ_CP046609.1\|WP_039361167.1\|947982_949017_-\|iron-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270261

Protein	Function_ID	Function_description	E-value
NZ_CP046609.1\|WP_039361532.1\|943648_944068_+\|quinol-oxidase	gnl\|CDD\|259885	cd04223, N2OR_C, The C-terminal cupredoxin domain of Nitrous-oxide reductase. Nitrous-oxide reductase participates in nitrogen metabolism and catalyzes the last step in dissimilatory nitrate reduction, the two-electron reduction of N2O to N2. It contains copper ions as cofactors in the form of a binuclear CuA center at the site of electron entry and a tetranuclear CuZ centre at the active site. The C-terminus of Nitrous-oxide reductase is a cupredoxin domain.	2.35564e-06
NZ_CP046609.1\|WP_039361190.1\|935923_936703_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270421	cd13703, PBP2_HisJ_LAO, Substrate binding domain of ABC-type histidine- and lysine/arginine/ornithine transporters; the type 2 periplasmic-binding protein fold. This subgroup includes the periplasmic-binding proteins, HisJ and LAO, that serve as initial receptors in the ABC transport of histidine and lysine-arginine-ornithine amino acids. They are belong to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	5.04826e-115
NZ_CP046609.1\|WP_039361173.1\|945303_946353_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.85311e-118
NZ_CP046609.1\|WP_039361188.1\|936770_938015_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223737	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].	1.23835e-48
NZ_CP046609.1\|WP_039361534.1\|942313_942829_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237123	PRK12511, PRK12511, RNA polymerase sigma factor; Provisional.	9.33278e-41
NZ_CP046609.1\|WP_039361197.1\|931272_932712_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.39396e-64
NZ_CP046609.1\|WP_039361536.1\|925444_927535_+\|cytochrome-c1	gnl\|CDD\|313759	pfam10605, 3HBOH, 3HB-oligomer hydrolase (3HBOH). D-(-)-3-hydroxybutyrate oligomer hydrolase (also known as 3HB-oligomer hydrolase) functions in the degradation of poly-3-hydroxybutyrate (PHB). It catalyzes the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers.	0
NZ_CP046609.1\|WP_039361192.1\|934569_935544_-\|ornithine-cyclodeaminase-family-protein	gnl\|CDD\|225280	COG2423, COG2423, Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism].	2.00881e-64
NZ_CP046609.1\|WP_039361200.1\|928148_929984_+\|peptidase-S1	gnl\|CDD\|225490	COG2939, COG2939, Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism].	1.01338e-125
NZ_CP046609.1\|WP_039361175.1\|944741_945257_+\|polyketide-cyclase	gnl\|CDD\|176866	cd07824, SRPBCC_6, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins. Uncharacterized group of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	8.6335e-67
NZ_CP046609.1\|WP_039361181.1\|942825_943608_+\|anti-sigma-factor	gnl\|CDD\|227949	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription].	5.72566e-25
NZ_CP046609.1\|WP_039361202.1\|924942_925308_+\|BON-domain-containing-protein	gnl\|CDD\|335963	pfam04972, BON, BON domain. This domain is found in a family of osmotic shock protection proteins. It is also found in some Secretins and a group of potential haemolysins. Its likely function is attachment to phospholipid membranes.	2.94434e-10
NZ_CP046609.1\|WP_039361169.1\|946381_947980_-\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	1.99901e-89
NZ_CP046609.1\|WP_039361196.1\|932850_933582_-\|DsbA-family-oxidoreductase	gnl\|CDD\|239322	cd03024, DsbA_FrnE, DsbA family, FrnE subfamily; FrnE is a DsbA-like protein containing a CXXC motif. It is presumed to be a thiol oxidoreductase involved in polyketide biosynthesis, specifically in the production of the aromatic antibiotics frenolicin and nanaomycins.	3.20183e-82
NZ_CP046609.1\|WP_039361199.1\|930141_930930_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.12201e-24
NZ_CP046609.1\|WP_039361164.1\|949082_950387_-\|deferrochelatase/peroxidase-EfeB	gnl\|CDD\|273606	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme. This model represents a small family of proteins with a typical Tat (twin-arginine translocation) signal sequence, suggesting that the family is exported in a folded state, perhaps with a bound redox cofactor. Members of this family show homology to Dyp, a dye-decolorizing peroxidase from Geotrichum candidum that lacks any typical heme-binding site.	2.67034e-148
NZ_CP046609.1\|WP_039361194.1\|933778_934573_-\|hypothetical-protein	gnl\|CDD\|225512	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown].	9.33457e-71
NZ_CP046609.1\|WP_039361178.1\|944064_944697_+\|DUF1571-domain-containing-protein	gnl\|CDD\|377879	pfam07608, DUF1571, Protein of unknown function (DUF1571). A family of paralogous proteins in Rhodopirellula baltica.	4.79102e-06
NZ_CP046609.1\|WP_039361183.1\|941919_942279_+\|hypothetical-protein	gnl\|CDD\|226765	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown].	1.13168e-39
NZ_CP046609.1\|WP_039361167.1\|947982_949017_-\|iron-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270261	cd13543, PBP2_Fbp, Substrate binding domain of ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic protein (Fbp) has high affinities for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.70525e-141

>NZ_CP046609.1|WP_039361188.1|936770_938015_+|FAD-binding-oxidoreductase
MDFDVIVLGAGIVGVSSALHLQDRGLRVALVDRRAPGEETSHGNAGLIERSSVVPYAFPRRLGTLLRYARNRSVDLYWDYRALPAYAGWLARFWRESSPQRLAAAARDLLPLVAASVAEHDALLARTDAQPLVHDGGWIEAFRSPALFDAETRAQQRVADAHGLRMTVLDAGALRAREPGIGDAFCGAFHWQDPKTVSSPGGLTKAYARLFERAGGTFALGDARTLVQVDDGWQVGTEHGPISARSAVVALGPWSDHVFEPLGYRIPLRAKRGYHMHYRPTRAPLNVPVCDTEAGFVVAPMEGGRLRLTTGVEIALRGAPPTGVQLARAEPLARDAFGIGERLDPEPWLGMRPCTPDMRPVIGPAPRHRHLWFAFGHCHHGLTLGPATGRLLAEMMTGAPTYIDPHPYRPARFG
>NZ_CP046609.1|WP_039361190.1|935923_936703_+|ABC-transporter-substrate-binding-protein
MNWKLSLCAAAALACAAVTAHAEQTTLRFGIEAAYPPFESKTPAGQLQGFDVDIGNAVCAKLNMKCVWVENAFDGLIPALQARKFDAINSAMNITSKRRQSIDFTPAIYVVPIVMIARHGSSLRPDVASLRGKHVGVLQGSSQEDFLKAHWATAGVAVVSYQDQDQIYADLVAGRLDAAVQEAQTAQDGFLDKPAGRDYQIVGEPLKDPATLGEGTGFGMRKSDKALQAKIVGALDALKKDGTLSALSQKYFKRDIVAK
>NZ_CP046609.1|WP_039361192.1|934569_935544_-|ornithine-cyclodeaminase-family-protein
MTQTAPTLPLTVDEAAVRAALPSLDVLGTLRSMFASLAAARAVQPPQTLTLFPDQAGDFITYLGALADAQVFGAKLSPYVVTGGKPDGKPIVTAWTALMSMRTGQPLMWCDAGLLTVERTAGTTALAVDCLAPRDARHLAIVGAGAVGLAHLRHTAGLRDWETIRVYAPSLAGDAAQQAALAQLDPRARAAASVEACVRDADVVMLCTSSGTPVLGDGMLTRPALVTSISTNVARAHEIPPAWLPDMDVYCDYRHTTPASAGEMQIAAAEHGWDAARIAGDLPALVAGTCPAPSYARHAFFRSIGLGLEDIAIAHALYTHLARA
>NZ_CP046609.1|WP_039361194.1|933778_934573_-|hypothetical-protein
MSGTRARGRYNGATAAAAARGRTGMPANGAPALRPDALPGPRPPEMANPMRKKKSPVKDLLLTRYAPIADGIAALFFPYAEVVIHDLHDQTVLYLANNLSKREVGDDSALEEIDHSARERVIGPYEKLNWDGRRMRCVSNVLFDDEGRPAGMMCINFNIAVFDEVRATLDLFIKGAGVVAQPDELFRDDWQERINTFLHGWLRERQVGLNGLTREHRRELVEALYAEGAFRGKSAANYVANVLGMGRATVYKHLKHLKETQGDA
>NZ_CP046609.1|WP_039361196.1|932850_933582_-|DsbA-family-oxidoreductase
MTTAPAPTARPTLTVEIWSDLICPWCWIGKRRFDEALATFAHADRVDVALRAYRLMPGQPVEPVEAMLGGKYRMSPAQVDQMLRQVTDAAASVGLRYDLPGTLVGDTLDGHRLVKLAEATGRAHALTERLYRAYFCEHGSLFDHAELTEFAVEAGLERSAVEAVLRSDQYRAEVEADVARAAQIGGRGVPLFVFGGRYAVSGAQPADAFAQALDQAWRDGIVELDGGDAAACGPDGCELPARS
>NZ_CP046609.1|WP_039361197.1|931272_932712_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MTHGIHGEKRWYALIVLCLGVLMIVLDSTIVNVALPSISTDLHFTETALVWVVNAYLLTFGGCLLLGGRLGDLYGQRRMFLAGLVVFTLASLACGLAQSQAMLIAARAVQGIGGAVVSAVALSLIMNLFTEPGERARAMGVYGFVCAGGGSIGVLLGGLLTSSLSWHWIFLVNLPIGIAVYAMCVSLLPRLRAPAGTARLDVAGAITVTASLMLAVYGIVGGNEAGWLSTQTVALIGAAVALLAMFIAIEARAAHPLMPLSLFSSRNVALANVIAVLWAAAMFAWFFLSALYMQRVLGYGPLQVGLAFLPANLIMAAFSLGLSARIVMRFGIRGPIAAGLLIAACGLALFSRAPVDGGFVWHVLPGMTLLGIGAGVAFNPVLLAAMSDVDPSDSGLASGIVNTAFMMGGALGLAVLASLAAARSNTLAAANAAPLDALNGGYHAAFAFGAAFAAVAALIGFALRIRQQGAVEGVGPAMH
>NZ_CP046609.1|WP_039361199.1|930141_930930_-|sulfite-exporter-TauE/SafE-family-protein
MSLPHIDLLYSLSGLFVGILVGLTGVGGGSLMTPILVLLFGVHPATAVGTDLLYAAATKATGTLVHGLKGSIDWRITGRLAAGSVPAAAITLWWLHTHGMNAPGTARMIQLVLGVALLLTSLALIFRPQLTAFAARNPLAPSPTRTLWSTVLTGAVLGVLVSMTSVGAGAIGVTVLLLLYPALATTRIVGSDIAHAVPLTLVAGMGHWLLGSVDWSMLLSLLLGSLPGIVLGSLLSARAPERLLRNLLASTLVAVGIRLVLA
>NZ_CP046609.1|WP_039361200.1|928148_929984_+|peptidase-S1
MTTRKSLKDGFALFGTTLSVPLAAAAAAALLVTGCGGDDGASPAASAAAAAATSAGASTSANTNATAAAADQPYVDNDVYGTGPNDAVTDSTEGAAVVHRTVTIGGKAIKYTATTGHLTTIDPVTSAPNAKMFYVAYTQDNPDPSKPRPVTFFYNGGPGSSSVYLLLGSYGPKRLQSSFPNFTPPAPYKLLDNPDSLLDRTDLVFINPVGTGYSAAIAPAKNKDFWGTDQDARSIDRFIQRYLTKYSRWNSPKFLYGESYGTARSAVVSWVLHEDGIDLNGITLQSSILDYANALSAPGTFPTLAADAFYWKKTTLNPTPTDLDAYMVQARNYADNTLAPLAQKPNPQDGGFVNVRLNLNLQTAQQMGAYIGTDPTSLIQTFGNPAALGNVPSSNDNPPYTFFLTLVPGTQIGQYDGRANFTGKGIAPYILPNSGSNDPSITNVGGAYTVLWNSYINTDLKYTSTSSFVDLNDQVFNNWDFSHTDPTGANKGGGNTLYTAGDLASTMSVNPDLKVLSANGYFDAVTPFHQTELTLAQMPLDPTLKAQNLTIKNYPSGHMIYLNDASRTALKGDLANFYDGILANRTALQRVLKLQMRTQQLKQQKLQQQGQ
>NZ_CP046609.1|WP_039361536.1|925444_927535_+|cytochrome-c1
MTRLGWGRRMVFGAALAAVAILGACNGDESAERNRLPGFVSGSVRTTAYDGASDDLLTAGLGKTGLGSASAPGFANAARPTSAELRRLAIWSNYRALVDMSANGGYGRFWGPNVDLDGNDTLGEGKIPGTEYLAYADDGSGSKNVTLLVQVPASFNPAQPCIVTATSSGSRGVYGAISAAGEWALKRGCAVAYNDKGGGNGAHELMSDTITLIDGTLANAVLAGTASLFTANATSGELATFNSRFPNRYAFKHAHSQQNPEQDWGRVTLQSVEFAYWALNEQFGPLIDGSHHGVRYRAGDVTTIAASVSNGGGASLAAAEQDNRGWITAVVVGEPQINVRMAPNAVVRSGGQPVPSFGRPLADYATLANLLEPCAAASASLADAPSLSALPAATTQSIRTQRCATLAAAGLVSGADTQSQAADALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSHVTDNLCNFSFATTNPATGAVAAPATSPMPAVFGVGNGVPPTSGINLVFNTGVGVDHRLATPDASFAGALCLRQLWTNGMLGMPANVDAVRVNANLQGKPAIIVQGRSDALVPVNHASRAYVAQNGISEGGRSQLVFYEVTNGQHFDAFLPVPGFDTRFVPVHYYNLQALNLMWKHLKNGAPLPPSQVIRTVPRGGTPGAAPALTGANLPPISAAPGANAIPVGAGAIDVPL
>NZ_CP046609.1|WP_039361202.1|924942_925308_+|BON-domain-containing-protein
MKSIVLRALGVAAVAACLSGSVYAQSSDAAATEAPAAATSAPKAAAKTAKKANRKLGYAVRKAITKAGGIDVANIVVRSKGGAITLEGTVPDQAQIDKAEEAAKGVQGVTSVSNKLTVQQQ
>NZ_CP046609.1|WP_039361183.1|941919_942279_+|hypothetical-protein
MNRILVVAALTAAVVRPAAAEPPRAGDGKLVDEDHMTLYVFDRDAPGKSACDRACATNWPPALADAYDKATGALSVVARDDGSKQWAYRGRPLYRWKLDHKPGDAGGDGVGGMWHVARP
>NZ_CP046609.1|WP_039361534.1|942313_942829_+|sigma-70-family-RNA-polymerase-sigma-factor
MSYESDLLVWLPHLTRYARALTGDRAWADDLVQDTLERALNRPPRDGGNLRAWLLTLLRHRFIDQLRARHEIAVDDATAPWQTMAAPAGEIGGLVLRDVQRALYRLPVEQREVLLLVALEELSYRDAAEVLGVPVGTVMSRLARARGQMRALLSDEPPAHGTAALRVIGKT
>NZ_CP046609.1|WP_039361181.1|942825_943608_+|anti-sigma-factor
MMDDPHKPSNARDDDASAQLLSALLDGELSGHERREVLERVLADPEEAERLAHYRAQRDALQALFPLPAAAPALFVQRREPRRRGIAYAFAGLAAGLLIGVALHAGWVAFGGEPGFAARADVAYATYVADRDHPVEVSAGDPDHLVAWLSARLGRPVRAPSLDEYGYRLLGGRLLPGEAGPAAQLMYQRADGERVTLYMTAYDTRRLAPQAMSAGGRYTYFWSDRGMGYALSGQGDERRLRELAIDACGALGGPTDAWKG
>NZ_CP046609.1|WP_039361532.1|943648_944068_+|quinol-oxidase
MTKGLVPMLVLAALAAGTALAQADGDVPLRVPVDADGVQRVAIVGGSYFFRPNHVIVRAHVPVELTVSAEPGPVPHSFEIDAPQAGIAVRTELGTTPKTFRFTPSQPGRFAYYCTHRLLFFKSHRERGMEGALDVEAAP
>NZ_CP046609.1|WP_039361178.1|944064_944697_+|DUF1571-domain-containing-protein
MIAALLAASLIGASMTADPVTVAQAHFDHVRSYRATIRSSARGGEHTEIRYAYLKPGFVRMDFVSPHHGAVLAYDPGDGKVRLRPFGAHAPPALTLSPSNPLVRDRSGHRVDRSDVGELLRNVHALQEGGATVTEGEEAVGGRTALRVSVTGAPAHAVDGVHRYRLWLDTEDGFPLKVVSFADGDDVPLETVTLDDVEIDVAFPERFFAP
>NZ_CP046609.1|WP_039361175.1|944741_945257_+|polyketide-cyclase
MAEYRFSTIWRVDAPLVAVWDAIYQVDRWPVWWKGAVRTVEIEPGDVRGVGALHRYTWKGALPYRLTFDMRVRRVEPPHALEGRAGGAIEGDGCWSFIADGARTIVRYDWHIRTHVRWMNRLEWLGRPLFRWNHDVVMREGAKGLARLLGAAVETEGRTFRPLPDAGCADA
>NZ_CP046609.1|WP_039361173.1|945303_946353_-|ABC-transporter-ATP-binding-protein
MSELRIHGLSKSFGSHTVLHDIDLTVRRGSRLALLGPSGSGKTTLLRVLCGFERAERGTVEIDGRRVAAPDVHLPPEQRRIGYVPQEGALFPHLSVADNIAFGLPRAARRRHHRVDELLEMVGLPASYASRAPQQLSGGQQQRVALARALAPEPSLVILDEPFSALDTSLRHETRSAVADALAAAGATSVLVTHDQPEAMTLGDEVAVMWHGRLVQTAAPQTLYRQPITRDVASFVGQAVLLAGRVRGTHIACALGDLPLVAPLPDGPADAMLRPEQIGIVPLTHADAARGHTARVEAAQFAGQDADVLLRLDADGDVRVRARVPGHRCPAVGERVALVVDGAVMAYAC
>NZ_CP046609.1|WP_039361169.1|946381_947980_-|iron-ABC-transporter-permease
MSDAVSRTARAARGGEHMATRRRPSRALVAAAACGPLAILLPLGFTLYRAATFGIDDAIELLWRPLVGELLVNTLSITLAATLACTLLGTALAWFIERTDLPARPLWTALAAAPLAVPPFITSYAWVSLSLDLQDFLGALIVLTSAYFPLVYLPVAAALRELDPALEESARTLGCSPWHTFFRVVLPQLRPALCGGMLLVALGVLSEFGAFQLLRFRTFTTEIYAEYRTAFDGGGASLLGCVLIALCLLCLAIEARARGHARYGHTHRAARRVAMRYPLGRLRGPVTVAFAALAAATLGVPLAMIGYWLTQQGAAAVTPADVSPELLWQATLASSGYGLMAAAVTTLLALPLAFLLVRYPGRVATLLERTAMTVQGVPGIVVALAIVSITVRLLQPLYQSAPALVGAYAILFLPLAVVSVRAALSHVQVRLEETARSLGLGWRATLTRVVLPLAAPGLGAAATMVFISVVTELNATLLLSPIGTRTLATQVWSDTATLAFAAAAPYAALLVALSLGASGLLFLLLGRASVRN
>NZ_CP046609.1|WP_039361167.1|947982_949017_-|iron-ABC-transporter-substrate-binding-protein
MNTSPVSRPLRHLISAAAAALMLTGALHAARAHAATLTLYNAQHEQVVNQLVKDFEAQSGITVKVRSGEGPALAAQLVAEGDRTPADVYFTENSPELVLLDRKGLFAKTDAATLQSVPARFNPADGNWVGVLARENVLIYNTAKIQPQQLPASLLDLAKPEWKGKVGVAPSDADFLPLVSAVLALHGEAATLQWLKGLKANAQIFDDDEGVTAAVNRGGVLTGIVNNYYWDRLHAELGDKSTRSAIYHFGKGDVGGAVNVSGAAVLKASKHQPEAQKFVAYLVSERAQKLMAGGHISFEYPLHPGVAPDPILKPFNELTPPALTFEQLGDDSQAGKLLRQAGLL
>NZ_CP046609.1|WP_039361164.1|949082_950387_-|deferrochelatase/peroxidase-EfeB
MADDSNQPPRPARRGFLKAGGAAVAAGLAAASIPAAKAADAPAPAPAPAFAHDDVEPFYGKHQSGIATPQQRHAYFAALDLTTAQRADVIALLKTWTDAAARMTRGDTAQPLAPTGGDEVAPADGGDALGLGPARLTITFGFGPGMFVLAGKDRFGLAKHRPAALVDLPRFNGDQLLPEKTGGDLFIQACADDAQVAFHAVRQLVRLGAKATQMRWGQAGFTSGKPGETPRNLMGFKDGTMNPPMSDPAAMNEFVWAGSEGPAWMNGGTYTVVRRIRITLEHWDNTELGFQEQVVGRHKYSGAPLGQKNEFEALDLDAADKDGNPVIPDNSHARLASPQLNNGAQILRRAYSYNDSTNFYIERWPPWRQQTEYDAGLMFVAHQRDPRKGFIPINEKLAKLDIMNQFTTHVGSAIFACPPGAQPGSYIGAALFEA

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Crispr_ID: NZ_CP046609_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046609_2

3399265-3399372

Orphan

Consensus_repeat	Method
GCAGCCTCCCTTGGGGCGGCCCGGCGGGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046609_2

>merge|NZ_CP046609|2|3399265-3399372|CRISPRCasFinder
GCAGCCTCCCTTGGGGCGGCCCGGCGGGAGGCAGAACAGCCCCCACGCTCACTTCGTTCGCTGCCCCCCGAGGGGGCCGCAGCCTCCCTTGGGGCGGCCCGGCGGGAG

>NZ_CP046609|2|2|3399265-3399372|CRISPRCasFinder
GCAGCCTCCCTTGGGGCGGCCCGGCGGGAG	GCAGAACAGCCCCCACGCTCACTTCGTTCGCTGCCCCCCGAGGGGGCC
GCAGCCTCCCTTGGGGCGGCCCGGCGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046609.1\|WP_039346385.1\|3390929_3392747_+\|bifunctional-isocitrate-dehydrogenase-kinase/phosphatase	unknown	unknown	gnl\|CDD\|235089
NZ_CP046609.1\|WP_039346393.1\|3394942_3396217_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|223489
NZ_CP046609.1\|WP_039346382.1\|3389545_3390625_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293811
NZ_CP046609.1\|WP_039346407.1\|3401382_3402108_-\|copper-homeostasis-protein-CutC	unknown	unknown	gnl\|CDD\|225684
NZ_CP046609.1\|WP_039346376.1\|3386087_3387683_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP046609.1\|WP_039346413.1\|3402603_3402987_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046609.1\|WP_039346400.1\|3399380_3400100_+\|dethiobiotin-synthase	unknown	unknown	gnl\|CDD\|234625
NZ_CP046609.1\|WP_039346420.1\|3404727_3406395_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|129911
NZ_CP046609.1\|WP_039346374.1\|3384928_3385702_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235910
NZ_CP046609.1\|WP_039346426.1\|3411368_3411620_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046609.1\|WP_039346416.1\|3403143_3404430_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP046609.1\|WP_039346539.1\|3392802_3393570_+\|carbonate-dehydratase	unknown	unknown	gnl\|CDD\|238448
NZ_CP046609.1\|WP_039346410.1\|3402202_3402607_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046609.1\|WP_039346379.1\|3387882_3389529_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP046609.1\|WP_039346388.1\|3393681_3394359_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180774
NZ_CP046609.1\|WP_039346428.1\|3411996_3412554_-\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP046609.1\|WP_039346391.1\|3394398_3394836_+\|YchJ-family-protein	unknown	unknown	gnl\|CDD\|234985
NZ_CP046609.1\|WP_039346397.1\|3396682_3398029_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|235894
NZ_CP046609.1\|WP_039346423.1\|3406484_3410057_-\|indolepyruvate-ferredoxin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|237279
NZ_CP046609.1\|WP_039346404.1\|3400154_3401177_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|273075

Protein	Function_ID	Function_description	E-value
NZ_CP046609.1\|WP_039346385.1\|3390929_3392747_+\|bifunctional-isocitrate-dehydrogenase-kinase/phosphatase	gnl\|CDD\|235089	PRK02946, aceK, bifunctional isocitrate dehydrogenase kinase/phosphatase protein; Validated.	0
NZ_CP046609.1\|WP_039346393.1\|3394942_3396217_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	8.69368e-19
NZ_CP046609.1\|WP_039346382.1\|3389545_3390625_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293811	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized Thermus thermophilus TTHA1429 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.21514e-22
NZ_CP046609.1\|WP_039346407.1\|3401382_3402108_-\|copper-homeostasis-protein-CutC	gnl\|CDD\|225684	COG3142, CutC, Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism].	1.78636e-58
NZ_CP046609.1\|WP_039346376.1\|3386087_3387683_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP046609.1\|WP_039346400.1\|3399380_3400100_+\|dethiobiotin-synthase	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	1.97635e-91
NZ_CP046609.1\|WP_039346420.1\|3404727_3406395_+\|Na+/H+-antiporter	gnl\|CDD\|129911	TIGR00831, Putative_Na+/H+_exchanger_Rv2287/MT2345/Mb2309., Na+/H+ antiporter, bacterial form. The Monovalent Cation:Proton Antiporter-1 (CPA1) Family (TC 2.A.36) The CPA1 family is a large family of proteins derived from Gram-positive and Gram-negative bacteria, blue green bacteria, yeast, plants and animals. Transporters from eukaryotes have been functionally characterized, and all of these catalyze Na+:H+ exchange. Their primary physiological functions may be in (1) cytoplasmic pH regulation, extruding the H+ generated during metabolism, and (2) salt tolerance (in plants), due to Na+ uptake into vacuoles. This model is specific for the bacterial members of this family. [Transport and binding proteins, Cations and iron carrying compounds].	3.18469e-116
NZ_CP046609.1\|WP_039346374.1\|3384928_3385702_+\|SDR-family-oxidoreductase	gnl\|CDD\|235910	PRK07024, PRK07024, SDR family oxidoreductase.	1.04785e-153
NZ_CP046609.1\|WP_039346416.1\|3403143_3404430_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	5.47775e-60
NZ_CP046609.1\|WP_039346539.1\|3392802_3393570_+\|carbonate-dehydratase	gnl\|CDD\|238448	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	5.43406e-106
NZ_CP046609.1\|WP_039346379.1\|3387882_3389529_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	3.62478e-109
NZ_CP046609.1\|WP_039346388.1\|3393681_3394359_+\|SDR-family-oxidoreductase	gnl\|CDD\|180774	PRK06953, PRK06953, SDR family oxidoreductase.	1.50094e-140
NZ_CP046609.1\|WP_039346428.1\|3411996_3412554_-\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	3.42757e-63
NZ_CP046609.1\|WP_039346391.1\|3394398_3394836_+\|YchJ-family-protein	gnl\|CDD\|234985	PRK01842, PRK01842, hypothetical protein; Provisional.	1.593e-90
NZ_CP046609.1\|WP_039346397.1\|3396682_3398029_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|235894	PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional.	0
NZ_CP046609.1\|WP_039346423.1\|3406484_3410057_-\|indolepyruvate-ferredoxin-oxidoreductase-family-protein	gnl\|CDD\|237279	PRK13030, PRK13030, indolepyruvate ferredoxin oxidoreductase family protein.	0
NZ_CP046609.1\|WP_039346404.1\|3400154_3401177_+\|biotin-synthase-BioB	gnl\|CDD\|273075	TIGR00433, biotin_synthase, biotin synthase. Catalyzes the last step of the biotin biosynthesis pathway. All members of the seed alignment are in the immediate gene neighborhood of a bioA gene. [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin].	1.11202e-178

>NZ_CP046609.1|WP_039346397.1|3396682_3398029_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MSTPATDDWVARSLRAVWHPCTQMKHHERLPLIPVARGAGLWLYDRDGRRYFDAISSWWVNLFGHANPDINAALKDQLDTLEHAMLAGCTHEPAIELAERLHALTARTLGHAFFASDGASAVEIALKMSFHAWRNRGRANKQEFVCVANSYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGALPGETAADVAGRALADVRRLFVERGDRIAALIVEPLVQCAAGMAMHDPSYVRGLRALCDEFGVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLTRDDVFAAFYDDDTTRGFLHSHSYTGNPLACRAAVATLDLFERDDVLAANARKSATLRAALAPLDAHPQVRHLRERGTLFAFDVALDGDAARGFSRRFFERALERELLLRPIGTTVYLMPPYVMSDDDIAWLAQSTRDTLDATLEGLVR
>NZ_CP046609.1|WP_039346393.1|3394942_3396217_+|prolyl-oligopeptidase-family-serine-peptidase
MAFSKVLVGWMAACALSAAQAGTLSSADSGTGAGASGSLAHAERFDYSDSNLPQVAADLNEQILRIPADASGTVTLEATLFKPNGPGPFPLVVFNHGKNTGDLHLQPRSRPLAFAREFVRRGYAVVAPNRQGFAGSDGTYQQEGCNVGKNGLAQAADVDATVRYMSHQSYVDASRIVVAGTSHGGLVSVAYGTEAAPGVRGIINFSGGLRQDLCDGWQKNLVDAFDQYGAHTAVRSLWLYGDNDSVWTPGLVAQMHGAYVSHGTQAQFIDFGRYKDDAHRLIVDRDGVPVWWPAVNAFLAQLNLPTSVRYAVANPHEPKASGYASIDSVNAVPYVDEAGREGYRRFLNQHPSRAFAVSSEGAWSWAEGGDDPMALALDNCAKQGAGSCRLYAVNDRVVWNNATQTADSDDSNARDTGTPALASR
>NZ_CP046609.1|WP_039346391.1|3394398_3394836_+|YchJ-family-protein
MILNRPDACPCGGASPAPAGKAPAPRYAACCGRFIDGGQAAPTALELMRSRYSAYVLGATDYLRATWAARTCPADLDTDPDAPDAPRWLGLAVKRHAPLDERHAEVEFVARYKVGGRAYRLHETSRFERDEQGFWRYVDGEVSER
>NZ_CP046609.1|WP_039346388.1|3393681_3394359_+|SDR-family-oxidoreductase
MKTALIVGASRGLGREFVRQYRRDGWNVIATARDDASLDALRALGAHAHALDITQPEQIAALGWKLDGERLDAAVLVSGVYGPRTEGVETVTAEDFDAVMHTNVRGPMQLLPIVLPLVEDARGVLAVVSSRMGSIAEATGTTGWLYRASKAALNDALRIASLQTRHAACISLHPGWVRTDMGGAQAAIDPETSVTGMRRVIAESGADVSQANGRFFQYDGVELSW
>NZ_CP046609.1|WP_039346539.1|3392802_3393570_+|carbonate-dehydratase
MNPQDNPLSHLFDNNDAWVKHKLEDDPQFFARLAHQQAPEYLWIGCSDSRVPANEIIGLPPGEVFVHRNIANVVVHSDLNCLSVIQFAVDILRVKHIMVVGHYGCSGVNAALLNRRVGLADNWLHHVQDVRERHTALLDAWPVGEARYRRLIELNAIEQVVNVCRTTIVNDAWARGQSLTVHGLVYGVHDGRMRNLGMAVSSFDALDETYKRCVAALVAGGEHAPDNDMIAADAARLEGVAQAVAATLKPCDDAK
>NZ_CP046609.1|WP_039346385.1|3390929_3392747_+|bifunctional-isocitrate-dehydrogenase-kinase/phosphatase
MNHFPKLLSSQIGFDVAQTLLENFDRHYRIFRDAAVEAKTLYEQGDWHGLQRLARERITSYDDRVKECVEVLEDEYDAENIDDEVWQQIKLHYIGLLTSHRQPECAETFFNSVCCKILHRSYFSNDFIFVRPAISTEYLENDEPAAKPTYRAYYPGTDGLAAALERIVTNFQLEPAFDDLPRDIACVMEAIHDEFGHFDEAPNFQIHVLSSLFFRNKSAYIVGRIINADRVLPFAVPIRHVRPGVLSLDTVLLRRDQLMIIFGFSHSYFLVDMGVPSAYVDFLCTIMPGKPKAEIYTSVGLQKQGKNLFYRDLLHHLSHSSDRFIIAPGIKGLVMLVFTLPSFPYVFKIIKDHFPPPKETTRAQIMEKYQLVKRHDRLGRMADTLEYSSVALPLARLDHALVRELEKEVPSLLEYEDGNLVIKHLYIERRMTPLNLYLQNGSDTDVEHGVKEYGNAVKELMKANIFPGDMLYKNFGVTRHGRVVFYDYDEIEYLTDCNVRRVPPPRNEEDELSGEPWYTVGPHDIFPETYGPFLLGDPRVRDVFMKHHADFFDPALWQASKDKLIQGELPDFYPYDTALRFCVRYPARFGATERGDAAGDAQRAA
>NZ_CP046609.1|WP_039346382.1|3389545_3390625_-|MBL-fold-metallo-hydrolase
MNALEHQLDYPFADTLPAAGDTFEVAPGVRWLRMPLPFSLDHINLWLLRDEIDGQPGWTIVDCGISSDAIRTHWEQIFDTHLDGLPVLRVLVTHCHPDHFGLANWLCEGGDKGRWNVRLWMTLGEYMFGCLMAAGNGSNAGGAAAADHFARHGLTDPAALDKLRNRRSYYSDLVPAVPPRYRRLREGDVVTIGARTWRVVTGFGHSPEHCALHSEADGVLISGDMVLPRISTNVSVFDLEPEANPLALYLQSLGRYETMAPDTLVLPSHGKPFRGVRTRIAQLREHHDARLAEVRVACAEKPMSAADVVPIMFRRRELDIHQMTFALGEALAHLNLLWLAGELVREQGDDGVLRFRTAG
>NZ_CP046609.1|WP_039346379.1|3387882_3389529_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MAAATPTGALVALHHVSFRFDDGFTLFDSLDLSIDRTPTGIVGRNGIGKSQLAQLIAGRCAPSAGTIERHTSVVYVAQQHDDGDVSAGPRTVAQIAALDAPLGALARLADGRAEPHDFDLISDRWDLAERLRIALDAAGLHDVRADMPAQALSGGQLARVALIGALLSGAGLLVLDEPTNHLDAPGRAWLRAALDGWRGGVVIVSHDRGLLAGVQRIVELTPQGLRSYGGNYTLYRAQRDAEQDAAQSVLDNARAERGRVRRRLEQEHDTIQRHAAASLRDAKTANLSSMAKQGRKGAARSIMGTVRRHQNEFKATLDERVQEAAARVEADAPVLVSLPGTEVSARRQLFTFERARLPWRIAGDADTITWSASGPVRIALTGPNGCGKSTLLRMLAGELEPRSGACTTHVSAAYLDQRLALLDPDRSIVEQLGLLDTPLAEGDLRSRLALLQLDAVRATQPARQLSGGERLKAALACALWRGVPAQLLLLDEPTNHLDLESVRAIEAALAGFPGAIVVASHDTAFLAALDPTHTMQWHRDGWRYEPVA
>NZ_CP046609.1|WP_039346376.1|3386087_3387683_+|ABC-transporter-substrate-binding-protein
MQVKLFAAATLAAALAAPGLAAAKPLTICTESSPDGFDVVQYNSLVTTNASADVIFNTLVSYDEAAKKVVPALADKWDASADGLTYTFHLRPNVAFQTTDYFKPTRSLDADDIVFTFSRMLDDSNPWHKVAGASGFPHAQSMGLVKLVKSVTKVDDNTVKFVLNEPNATFVPILTMGFASIYSAEYADQLLKAGKQTDLNAKPVGTGPFVLKSYTKDALIRYDVNPTYWGTKPKVDRLIYAITPDPSVRLQKVKAGECQIALSPKPQDVLAAKGESALKVVQTPAFMTAFVALNTQKKPLDNDKVREALNLAFDRATYLKVVFDNTATAANNPYPPNTWSYAKDVAPYAYDPAKAKQLLAQAGFPNGFSTTIWTRPTGSVLNPNPKVGAELLQADLAKIGVKAEVKVIEWGELIKQAKLGQHDILFMGWAGDNGDPDNYLSPLFSCNAVKSGINFARFCDTQLDKLIADGKSTADQAKRAKLYEAAQKIIHDQALWIPLGYPTAAALTRTNVSGYHVSPFGRQNFTTVAVQ
>NZ_CP046609.1|WP_039346374.1|3384928_3385702_+|SDR-family-oxidoreductase
MTTPLKVFITGASSGLGLAMAEEYARQGATLALVARRTDALDAFARRFPKLSISVYSADVRDADALATAAASFISTHGCPDVVIANAGISQGAVTGQGDLATFRNVMDINYYGMVATFEPFVGPMTATRHGTLVGVASVAGVRGLPGSGAYSASKSAAIKYLEALRVELRPAGVGVVTIAPGYIRTPMTAHNPYRMPFLMDADRFAARAAQAIARQHAFRVIPWQMGVVAKVLHVLPRWLYDRLFEKAPRKPKAGAH
>NZ_CP046609.1|WP_039346400.1|3399380_3400100_+|dethiobiotin-synthase
MTAPLSLFVTGTDTEIGKTFVSAAMLHAFARHGLRAAALKPVAAGAYERDGVWCNEDADQLDAAANVVLPPELRTPFLLKAPAAPHIVAAQEGVTLDIDTIVACHREALTRAEIVVVEGAGGFRVPMNDTQDMADLAVALGVPVVLVVGVRLGCINHALLTADAIAARGLTLAGWVANHVDPAMSFPDENIATMRDWLAREHGAPLLGRIPHMSPADPESAAAMLDIAALVETLRAAQH
>NZ_CP046609.1|WP_039346404.1|3400154_3401177_+|biotin-synthase-BioB
MTQAQTATTVQPDAIPVAAPVSQRWRVADVVALFELPFNDLIFRAQQVHREHFDANAVQLSTLLSIKTGGCEEDCGYCSQSSHHDTGLKAEKLMDVDAVLDAARAAKANGASRFCMGAAWRNPKERHMPALTEMVRGVKELGLETCMTLGMLEDEQAQELASAGLDYYNHNLDTSPEFYGQVISTRTYQDRLDTLDRVRDAGINVCCGGIIGMGESRRERAGLISQLANLNPYPDSVPINNLVAIEGTPLEGTAPLDPFEFVRTIAVARITMPKAVVRLSAGREQLDDGLQAMCFLAGANSMFYGDQLLTTSNPQSQKDRALFERLGIRSSDADAMTANA
>NZ_CP046609.1|WP_039346407.1|3401382_3402108_-|copper-homeostasis-protein-CutC
MNRNAASSVLLEVIATTVGDAKAAARAGADRLELVTAITEGGLTPSVGLIEAVVAAVPIPVNVIVRPHSRSFVYDADDLRVIERDVRAAVAAGANGVVFGALDARGDVDLDALARIAAAADGRALTFHRAFDVSRDLNAAFDALLRVPSVTSVLTSGGHPSVLDAVATITRLVRQAAGSTCTVLAGSGLTVDAVGDFVRATGVRAVHFGSGVRPRGEVLAPVDQSLVERVRAAIDGAAAHV
>NZ_CP046609.1|WP_039346410.1|3402202_3402607_-|hypothetical-protein
MSFARNALAIMLFTIAGMCVITAQMMAFMKVGHAGATVVFVAVLFAVSALLLAAGAFAGAFRPRARGAGIVLLVAAATTALGMVGWGMLVLTPAIVDVMQQQGAYFNARMFRFVPGTAVTGLSALVGVWLVRRG
>NZ_CP046609.1|WP_039346413.1|3402603_3402987_-|hypothetical-protein
MKRPISLTILAWIIIVTNAITCVYTPFTIGMPTTQALLSHYLLPVWATLGISVILEAVNVAIGIAILKGREWSRKAYIATAVLGFAFSFVNMPASMYAVLIPGVLLFALFVYLLFRRPATAYFQANA
>NZ_CP046609.1|WP_039346416.1|3403143_3404430_-|EAL-domain-containing-protein
MTIVQQERPAAASPYRFEREVSSGFERLATQHRDMTLTTVFQPIFSLSHQRAVGYEALLRAHDALDRAVSPLDVFGEAARQGELLQLDRLAQALHLENFALLGAEREWLFLNVHPGVLTDPFQAAALLANLKRLGMPPRRVVLEVLEQRAEDVERLAEAVREFRTHGFLIALDDFGAGHSNLERIWQLNPDIVKLDRIMLSHAAHRTGLTAILHGLVTLLHEAGKLVLVEGIETEHEAQIALSCEADFVQGYYFGRPAPGLPDSAAATGCIGELTERFRQQTDARERRDAQRLAPYLRAFERAAERLAAGEPLDEVCWNFLALDAAARCFLLDAHGRQSGRNVVLRADRALAEARFSPLADAQGANWLRRPYFRSAIAEPGRVQVTRPYLSINEAQPCVTLSVAVRIGDAQRVLCGDIDWRDDEADAG
>NZ_CP046609.1|WP_039346420.1|3404727_3406395_+|Na+/H+-antiporter
MEIVFTVLILLLTVALSGAVTRILPFQLPLPLMQIAFGAMLAWPKLNLHVTFDPEIFMLLFIPPLLFADGWRIPKRELYLQRRAILMLAFGLVFMTVLAVGYFAHWLIPELPLPIAFALAAVLSPTDAVALSGIAGKGRIPPQLMHILEGEALMNDASGLVALKFAIAAALTGMFSLRDASVTFVIVAAGGLATGAIVSWAFSALSTRFLNAEQEGDPAPGIVMTLLVPFAAYLFAEHLDLSGVLAAVSAGMMMNYTSFSRKSTVASRVRAESTWAMIEFVFNGMVFIMLGLQLPHIIGRTLVDAHHTSDALVGRMIFNVCAMMLALYAIRFLWVWLLRWFASRRAARHGLAGTMAGVRTIAVMTVGGVRGAVTLAGVLSIPVALSDGVPLPGRDTAIFVASAVILGSLVVAVIGLPLLLRGVRSSRSPLGDEERAARAAAAQAAIRAIDSSHDAISVDLDESGAARCADISARVMDQYRRRLATLADDGPTPRAEAKQAETMELQMRIAAVRAERSALYRLRSESKISDETLTKLLREIDLSETALSTRKKGLV
>NZ_CP046609.1|WP_039346423.1|3406484_3410057_-|indolepyruvate-ferredoxin-oxidoreductase-family-protein
MTARLPVDGTPALSDYRLTDNLTATRGRIFLTGTQALVRLLLMQRTVDAEQGLNTAGFVSGYRGSPLGMVDQQLWKAKKLLDAGGVRFLPAINEELGGTAVLGTQRVEADPERTVEGVYAMWYGKGPGVDRAGDALKHGNAYGSSPHGGVLVVAGDDHGCVSSSMPHQSDFAMIAWHMPVVNPANIADMLEFGLYGWALSRYSGAWVGFKAISETVESGSTVDLDALQTQWPAPEGFTPPTGGLHNRWPDLPSLTIEARLAAKLDAVRHFARTNSIDKWIAPSAQANVGIVTCGKAHLDLMEALRRLDLTVADLDAAGVRIYKIGLSYPLEMTRVETFVDGLAEVLVIEEKGPVIEQQIKDYLYNRTEGARPRVLGKHDAVGGCLLSELGELRPSRILPVFADWLARHKPALDRRERVVDLVAPQILSNEADAVKRTPYFCSGCPHNTSTKVPEGSIAQAGIGCHFMASWMERDTTGLIQMGGEGVDWAAHAMFTNTKHVFQNLGDGTYFHSGILAIRQAVAAKANITYKILYNDAVAMTGGQPVDGSISVPQIARQVEAEGVSRFVVVSDEPEKYDGHHGQFPPGTTFHHRSELDTVQRELRETPGVTVLIYDQTCAAEKRRRRKKGEFPDPDKRLFINDAVCEGCGDCGVQSNCLSVEPLETPLGRKRRIDQSSCNKDYSCVNGFCPSFVTVEGAALKKAAGAAFDEAALAARVDALPVPATHLDAAPFDMLVTGVGGTGVVTVGALISMAAHLEGKSASVLDFMGFAQKGGSVLSFVRIASSDRWLNQVRIDTQQADVLLACDMVVGASAEALQTVRHERSRIVVNTHRIPNASFVQNPDANLHADALLEKMRHAAGDGYLSSCDAQALAAKFLGDSIGANILMLGYAWQLGLVPVSLAAMMRAIELNNVAVPMNKLAFSIGRMAAGDAAGLDALWNARHTVAAHAAPETLAELIADREARLDAYGGARYVERYRALVSAARAKGDDALTRAVATTFYRLLAVKDEYEVARLYTDDAFRTALEAQFEGVPGQAYRVKFNLAPPTVAKAGRDGSAPKKRVFGPWMWPVFGMLARVRSLRGTWLDPFGRTVERRMERALADDYETTLARALAATTAGNAAQVTQLADLHARVRGFGHVKVRNLAGVKRAERELALQLGIEAATSAAVQHALDEMKGAGMLKGIPVVVAK
>NZ_CP046609.1|WP_039346426.1|3411368_3411620_-|hypothetical-protein
MRLSWRGFPVFARFEASRILAERAHVCAEPRVRREVAIRFRNLPRKAVHFNGERERVVCNAQISLRIAAFASDSKRCAMQRRA
>NZ_CP046609.1|WP_039346428.1|3411996_3412554_-|sugar-O-acetyltransferase
MANDDRTTIIPRRTPESAAMVAEVKRAMSIAARINRLTFDDAAEVRTLFGELIGMPVDDGFALIPPFHATGGTGMKLGRNVFINQNCTFYDLGGLEIGDDVMIGPNVSLITSGHPVEPSRRRDFVLAKPIVIERNVWIGAGATIIGGVTVGENSVVAAGAVVTQDVPPNVLVGGNPAAVIRSIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046609_2	2.1\|3399295\|48\|NZ_CP046609\|CRISPRCasFinder	3399295-3399342	48	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	450548-450595	7	0.854

1. spacer 2.1|3399295|48|NZ_CP046609|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.854

gcagaacagcccccacgctcacttcgttcgctgccccccgagggggcc	CRISPR spacer
atgaaacaacccccacgctcactgcgttcgctgccccccgagggggcg	Protospacer
....****.************** ***********************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

453638 : 523638

Acinetobacter_phage(28.57%)

tRNA,plate,integrase

attL 463071:463087|attR 529397:529413

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039352024.1\|453638_454985_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_039352027.1\|455088_455700_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_039352030.1\|456073_456703_+	hypothetical protein	NA	NA	NA	NA
WP_027783377.1\|456749_457265_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_006477094.1\|457280_458771_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_006477093.1\|458841_459345_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_021161818.1\|459407_459893_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_039352038.1\|459970_461806_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_039352040.1\|461769_462870_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_039352044.1\|462913_465583_+	type VI secretion system ATPase TssH	A0A223W0B1	Agrobacterium_phage	1.7e-89	31.8
463071:463087	attL	NA	NA	NA	NA
WP_039352046.1\|465625_466747_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_039352049.1\|466869_469428_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	7.5e-50	27.9
WP_039352052.1\|469427_470477_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_082139503.1\|470617_471553_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_039352058.1\|471539_473801_+	hypothetical protein	NA	NA	NA	NA
WP_039352061.1\|473882_474845_-	OmpA family protein	NA	NA	NA	NA
WP_039352064.1\|474849_475839_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_039352067.1\|475835_479780_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_039352071.1\|480081_480927_-	M15 family metallopeptidase	NA	NA	NA	NA
WP_039352076.1\|481048_482005_+	hypothetical protein	NA	NA	NA	NA
WP_039352239.1\|482211_483237_+	transporter	NA	NA	NA	NA
WP_076841682.1\|483261_483414_-	DUF1427 family protein	NA	NA	NA	NA
WP_039352079.1\|483438_484416_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_039352081.1\|484577_485498_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_039352084.1\|485622_487791_-	peptidase M1	A0A0P0IY26	Acinetobacter_phage	5.7e-51	26.7
WP_039352087.1\|488435_488930_+	Water stress and hypersensitive response domain-containing protein	NA	NA	NA	NA
WP_039352090.1\|489063_490197_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_039352243.1\|490286_491177_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_039352093.1\|491256_491829_-	DUF1415 domain-containing protein	NA	NA	NA	NA
WP_039352095.1\|491884_492505_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_039352098.1\|492724_494008_+	MFS transporter	NA	NA	NA	NA
WP_039352100.1\|494172_494778_+	nitroreductase family protein	NA	NA	NA	NA
WP_039352103.1\|494965_496216_+	Hsp70 family protein	NA	NA	NA	NA
WP_006477070.1\|496315_496519_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.4e-20	71.6
WP_076841766.1\|496735_496957_-	hypothetical protein	NA	NA	NA	NA
WP_039352109.1\|496939_498538_+	APC family permease	NA	NA	NA	NA
WP_039352112.1\|498649_499441_-	dioxygenase	NA	NA	NA	NA
WP_039352114.1\|499651_500248_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA
WP_021161789.1\|500276_500588_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_039352118.1\|500663_501506_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_039352121.1\|501513_502596_-	peptide chain release factor 1	A0A0S4KWG0	Pseudomonas_phage	6.7e-08	46.6
WP_039352123.1\|502689_503988_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_039352126.1\|504014_504776_-	response regulator transcription factor	NA	NA	NA	NA
WP_039352130.1\|504947_505202_+	hypothetical protein	NA	NA	NA	NA
WP_039352246.1\|505220_507035_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	2.3e-170	49.7
WP_039352132.1\|507090_507642_+	cysteine hydrolase	NA	NA	NA	NA
WP_039352135.1\|507638_508262_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_039352138.1\|508398_510066_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	5.8e-43	27.7
WP_039352141.1\|510270_510579_-	DUF3761 domain-containing protein	NA	NA	NA	NA
WP_039352144.1\|510659_511577_-	transcriptional regulator GcvA	NA	NA	NA	NA
WP_039352147.1\|511769_513089_+	MFS transporter	NA	NA	NA	NA
WP_039352150.1\|513171_513516_+	hypothetical protein	NA	NA	NA	NA
WP_039352153.1\|513930_515322_+	GABA permease	NA	NA	NA	NA
WP_076841684.1\|515601_516102_+	glycoside hydrolase family protein	NA	NA	NA	NA
WP_039352156.1\|516110_516524_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_039352159.1\|516793_518005_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_052760090.1\|518634_520230_-	hypothetical protein	NA	NA	NA	NA
WP_039352162.1\|520691_522380_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_039352164.1\|522372_523638_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
529397:529413	attR	NA	NA	NA	NA

DBSCAN-SWA_2

970200 : 982245

Enterobacteria_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039361120.1\|970200_971262_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	8.6e-85	47.9
WP_039361116.1\|971273_972167_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.8e-97	57.5
WP_039361113.1\|972151_972703_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	3.2e-51	53.0
WP_039361111.1\|972695_973595_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	2.2e-25	35.8
WP_039361109.1\|973980_975429_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	1.1e-53	28.8
WP_039361107.1\|975428_976223_+	ABC transporter permease	NA	NA	NA	NA
WP_039361104.1\|976222_977446_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-11	26.8
WP_076841713.1\|977442_982245_+	FkbM family methyltransferase	Q684B1	Sulfolobus_virus	6.2e-05	40.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP046610

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

80027 : 131684

Leptospira_phage(15.38%)

transposase,integrase

attL 99014:99032|attR 132581:132599

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077186797.1\|80027_81092_+\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	9.4e-47	32.8
WP_027810101.1\|81139_81616_+\|transposase	transposase	NA	NA	NA	NA
WP_027810102.1\|81591_81942_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.5e-17	39.4
WP_011875599.1\|82301_83858_+\|transposase	IS21-like element IS408 family transposase	K4I413	Acidithiobacillus_phage	1.4e-160	55.1
WP_006397350.1\|83874_84624_+	Insertion sequence IS408 ATP-binding protein	K4HZD4	Acidithiobacillus_phage	4.8e-82	60.7
WP_012213993.1\|87187_87976_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	8.8e-34	34.1
WP_077187207.1\|88348_88651_-	H-NS histone family protein	NA	NA	NA	NA
WP_048992704.1\|88838_89906_+	hypothetical protein	NA	NA	NA	NA
WP_007182917.1\|90073_91066_-\|transposase	IS5-like element ISBmu23 family transposase	E5E3P6	Burkholderia_phage	1.3e-186	100.0
WP_153260041.1\|91171_91312_+	hypothetical protein	NA	NA	NA	NA
WP_143282317.1\|91381_91720_+	hypothetical protein	NA	NA	NA	NA
WP_027813803.1\|91807_93064_+	hypothetical protein	NA	NA	NA	NA
WP_027813802.1\|93036_93717_+	hypothetical protein	NA	NA	NA	NA
WP_048985624.1\|93786_94218_+	hypothetical protein	NA	NA	NA	NA
WP_027813964.1\|94233_96078_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_027813566.1\|96081_96510_-	hypothetical protein	NA	NA	NA	NA
WP_027813564.1\|96761_97097_-	hypothetical protein	NA	NA	NA	NA
WP_027813563.1\|97101_97527_-	hypothetical protein	NA	NA	NA	NA
WP_027813562.1\|97523_97814_-	hypothetical protein	NA	NA	NA	NA
WP_034176084.1\|97895_98567_-	hypothetical protein	A0A1V0E8D0	Vibrio_phage	4.3e-05	28.9
99014:99032	attL	NA	NA	NA	NA
WP_027813560.1\|99778_100213_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_027813559.1\|100283_100634_+	mercuric ion transporter MerT	NA	NA	NA	NA
WP_027813558.1\|100648_100924_+	mercury resistance system periplasmic binding protein MerP	A0A218MNH0	uncultured_virus	5.2e-10	49.3
WP_027813557.1\|101421_103101_+	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	3.5e-40	28.1
WP_027813556.1\|103118_103775_+	organomercurial lyase MerB	NA	NA	NA	NA
WP_027813555.1\|103767_104004_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_027813965.1\|104496_104721_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_027813554.1\|104724_106032_-	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA
WP_027813553.1\|106041_106314_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_027813552.1\|107276_108935_+	divalent metal cation transporter	NA	NA	NA	NA
WP_027813551.1\|109133_109355_+	hypothetical protein	NA	NA	NA	NA
WP_027813550.1\|109921_110524_-	undecaprenyl-diphosphatase	NA	NA	NA	NA
WP_077176518.1\|110555_111806_-	MFS transporter	NA	NA	NA	NA
WP_027813548.1\|111869_112367_-	DUF2127 domain-containing protein	NA	NA	NA	NA
WP_027813547.1\|112433_115571_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	3.5e-65	23.9
WP_027813546.1\|115636_116704_-	metal transporter	NA	NA	NA	NA
WP_027813545.1\|116703_118098_-	TolC family protein	NA	NA	NA	NA
WP_046543880.1\|118259_118541_-	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_027813544.1\|118665_119946_-	HAMP domain-containing histidine kinase	B5LWN0	Feldmannia_species_virus	6.7e-15	29.9
WP_027813543.1\|119935_120625_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.7e-29	37.6
WP_027813542.1\|120878_121859_+	chromate resistance protein	NA	NA	NA	NA
WP_027813541.1\|121855_123040_+	chromate transporter	NA	NA	NA	NA
WP_027813540.1\|123128_123809_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.2e-24	36.5
WP_027813539.1\|123858_125100_+	MFS transporter	NA	NA	NA	NA
WP_027813538.1\|125096_126140_+	YncE family protein	NA	NA	NA	NA
WP_027813537.1\|126301_127987_-	hypothetical protein	NA	NA	NA	NA
WP_046196986.1\|127992_129483_-	ATP-binding protein	NA	NA	NA	NA
WP_027813535.1\|129479_131684_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
132581:132599	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP046608

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046608_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046608_1

302358-302551

Orphan

Consensus_repeat	Method
GCCGACGAGGCCGCCGACCAGGCTG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP046608_1

>merge|NZ_CP046608|1|302358-302551|CRISPRCasFinder
GCCGAAGTTGCTGCCGGCCAAGCCGCCCAGCTTCGCTGTGTATCCGCCCGACACCGTGCCCGACGACGAGGACGTACGGATCCGTCCGCCGTTGTTGCCGACGAGGCCGCCGACCAGGCTGACATTGCCGCCGGATACCGCGCCGGCGGCCGTGGAGGCGTCCAGCAAGCCGCTGAGCTGGCCGACGAGGCCGC

>NZ_CP046608|1|1|302358-302551|CRISPRCasFinder
GCCGAAGTTGCTGCCGGCCAAGCCG	CCCAGCTTCGCTGTGTATCCGCCCGACACCGTGCCCGACGACGAGGACGTACGGATCCG
TCCGCCGTTGTTGCCGACGAGGCCG	CCGACCAGGCTGACATTGCCGCCGGATACCGCGCCGGCGGCCGTGGAGGCGTCCAGCAA
GCCGCTGAGCTGGCCGACGAGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_046197024.1\|297278_297785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_135370735.1\|296211_297231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|374909
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP046608.1\|WP_039369771.1\|287714_288389_+\|response-regulator	unknown	unknown	gnl\|CDD\|182771
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226472
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371462.1\|319332_320073_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_CP046608.1\|WP_039369777.1\|292007_292556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_046544081.1\|305272_308632_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|214908
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	unknown	unknown	gnl\|CDD\|183494

Protein	Function_ID	Function_description	E-value
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	7.82215e-45
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	2.56861e-123
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	gnl\|CDD\|374909	pfam16967, TcfC, E-set like domain. TcfC is a family of bacterial fimbrial proteins. These sit in the outer bacterial membrane surrounding the RcpA proteins of the fimbrial shaft. This family is from Gamma-proteobacteria. This domain represents an immunoglobulin like E-set domain.	1.55611e-11
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP046608.1\|WP_039369771.1\|287714_288389_+\|response-regulator	gnl\|CDD\|182771	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional.	2.04329e-46
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.01216e-88
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	1.59005e-37
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.0081e-15
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	6.30767e-08
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	4.59687e-35
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	8.34452e-130
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	2.13638e-20
NZ_CP046608.1\|WP_046544081.1\|305272_308632_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	5.9701e-20
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	4.77376e-114
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.65508e-13
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	gnl\|CDD\|183494	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0

>NZ_CP046608.1|WP_046197026.1|298982_302033_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALVWNPLHGRWIAVGETARRRAKPGSAKRVAAALSLLGIVSLPAFALPSGENITAGKADILRDADGKTMSINQHTDKLITNWKEFDIAGGERVTFYQPGKQSIALNRVVGNNGSQIQGQLDANGKVFLVNPNGVLFGSGAQINVGGLVASTQNIADADFLAGNYRFSGNSTASIVNDGRITAADGGGVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTARAAGDLLNAVVNNTGTIEAKGLASRAGKITLDGGTVLVGGKLDASAAEAGAPAGSIVTRGEQVRVARGTTVDTRAGNTAGTWAIEAANAGVANNNADTLYPAGASIDGDTLSNNLGTTNVALTNTQGDLTVGGPVAWNSDRSLTLTSQKGNVDLQQAVSSASANASLNVNAADKIRINDTIKLTGRNAHLELNSKNGHTLNKDVVVTLSGDNASFRSNGEDYKVLHNMADLRNVDANLGGRYVIGNAIDGANTSFRSIGGSGTFTGVFDGLGNTISRLSITGTGPNIGLFGQSTGYLANLTLDSLTVDGTSAARATFVGGLVGDNLGRIENVNAKNTSVSYNGRNMVMMGGLVGRNLGTIDRANFAGRVSGSANTLSVGGLASVNGGTIADSTASADVTLSGSSGSPFQGSYSREVQSIGGFVGTNNGEIVRSSSRGRVSGRDDTSTGGFVGINFGTIRNASANATVTAGKGSYVGGFAGKIRDDGTIANASASGPVWANGALAIGGFVGDNAGGTLDGVQSDGDVTDLASGHVGGLAGRNGGTIRHAQARSTVTTGRNSHAGGLVGTNDGAVSNSSATGRVSAGEASDAGGLVGLNTGELDTVTATGNVTAGNGSRVGGLVGTNQGNRAIVRHAATTGNVGANNSTVGGLVGLNDQGAVIDDASSTGTIAGTFSTLGGLVGENAGTIRASTSSSRIDPASTIYGGRSWGTLVGYNNRSGNIEASSVEGAAQPYYMVGLSIGKINGQWYYGPVDR
>NZ_CP046608.1|WP_039369787.1|297909_298551_+|hypothetical-protein
MATLAFPISAAAAIDMVPKDVTLKETVTSVEVINNGDRAEYVSVSLSRLLNPGVPFENERLEPVGEIDQPSIYASPFRMSLAPGQTKTIAIKVLRPVDTETVYRLDVKPVIKVLGTGHAKSSASVVANLAFSGIVRQMPSKTRAALAVACEASGARLTATGNVHYRVEGAKADGQRLDDFNVYPGVPLPVPGRIVDIPGHSVCGAAAAKSPLP
>NZ_CP046608.1|WP_046197024.1|297278_297785_+|hypothetical-protein
MLPAVLLAEPVKLTGKTTSRVTAHVSRPNNLFVTDDKGGWFDQGLQMQQLGGWDTPYEVQARLKIVSTSGVFQVRLDSPLTITHQSKPTLVFRTPTVKLAPEGGVPKPLLVGQGTEFQNPAASGARDDSVGYYNLDIAAYPPTGNFKDNTGTYKGVLSMTFEPVIKAP
>NZ_CP046608.1|WP_135370735.1|296211_297231_+|hypothetical-protein
MNRISRERGSFGRWCKVVLLFFLAMSVGRAYGYILVLDNLSNGYSGCSWVDNGNGTSTVSVSIDYKSVVGHLGGRLFTSRGILIYTYNRNGELNPSANVARAMNINGKPYESAFVGTGYVMYKNSNYPGPSTGDWTNGSPFIANVVATVSNSVIADWPAIGIRAGNYTDGDDVGEVTGVAYIRFGENRGVCNIVVNPEVPPPPVEITMNMTAPDWNLGDLGQGDSKKTFSDTANQLCFTYPGSVVTGVRFIVNAKNVNGEVANRYRLKNVDDASQFVPYSIKLDGGGSTLSLPNSSNMAMRFASSGKTCFVPTFETTVDSNVKEGDYVDVLIFTVVTPS
>NZ_CP046608.1|WP_052760189.1|295655_296132_+|hypothetical-protein
MNRALCRALGALLLLWSSGSFAAGILKLSRTELTLAPDKPANELWVENVGDTPLYLDITQQRVLNPGHLPEQLVPVEEVSQPTLLVLPTRLALSPGQKYRMALKELSMPDESQVWRVTFRPREHIVVDADRDGDTTAPLFVSVGYGVVIYQSLAGAVR
>NZ_CP046608.1|WP_148668959.1|294969_295656_+|pilus-assembly-protein
MNFNAKHWALALVALACATVRPALAEGELMVMPAATRVYATHDQKVTVRNMGDAPLFLSITLQKIMNPGVTPEKKVDLGQLDNPGMLASPDKLTLGPGQSRQIELKSLTDPAQEEVYRLYVVPIRSLKVEDAPADKITAPMSVAIGYGVLVRHLPPPGKLNVAWTHRCEDGGITLESTGNVRTLFSNASYDGVKQPQTIAVFPGTPQHFATKRMTLSVQDEPKTLQCP
>NZ_CP046608.1|WP_039369805.1|292805_294965_+|fimbrial-protein
MDDSARYVATFNGKTLPGFVRYSATESVLEFDAAKYAANGVSPDDVDTIRNVVSKIDYKRCSKGCDIEVDGYYVTIDKLRRSISIRNSREDYFAPETTFGLVNNQSVDFRASSNGYRAANLNGATWVGLPSRSFGYVSWYANRTQTRGTSYGSQGVSSYYLQKNFAGTYLRAGKQNSIDYASGSVSTLLSPSFDQFVTFGSQSNLQVNRDAGSLVLYATAEGNYEFYRNGRLIMKRPAALGRNEISFADLPGGYYPVQVRLVDRNGNLVSQEIREINNVNFGAGGGNAWHFTVGKEMSDRGGFLMEGAMSRNFRQFYMNASTLVGRGGDWAAEVNVTRPTKIGDVDVTPTLGVLAGERKAGGYVSLAASSEALGSLSASRYLNNDVSRFYAGTSSTSVTYSRMVRKATVGYNYQQSGFGATHQAEVRWNYRPNGLWATFALGVQKGSFSRTSGGYGVYFNMTMQLDKVQASFSAARSGGQTQLSGDYRKDFQDGFGTTTLGVTGNRINSDYGINVYGSRSGTRGDASLNLGYNGDASNVDFNYRGMVAASKDGVAFGRYSNGGSAMLLRTPKLDGMRYGFNVEGSPVGGGSTYAVPLNTYTDVAFARVYSNSDKLDMNIEVPANIVRAHPGQVYAAQAKVDINMVYSGFLKDTEGKPISGKVVETGDVVHRNGLFSIVSKTMLSQVTVDGDGHRYTCSLKDASGNDFRCELPGLKESKE
>NZ_CP046608.1|WP_039369777.1|292007_292556_+|hypothetical-protein
MKLSKLVLAMGVTTALFGMAHTAQADTVSKKVTLTAQINDGIFVSKPDGSTWYGTEELEANDYTQTKFSKTLPVRVYTKNPDFNISLASPLKLTNGNYEMKNAKVTLGSAAGDSEVKFGAVQKVTQTVSGNGGFDEVHNLKINVDAPTMVGTNSTNGSYSGDLVMVFEPLAAAGGGDTPASK
>NZ_CP046608.1|WP_039369774.1|288529_291532_+|hybrid-sensor-histidine-kinase/response-regulator
MPAKLKRLLAHAAAVGRKPFDPGRVRRQQQMLLYGGGCAITAFIVVCAALVVRLDVQDSLERARSTFLQREAEFYANLQTLDRMLAMLGNRTEELWRKGAPPPQDALRAFAADHGRLAASNAGGGTPFFAMAEVTPARPAESYARYLGAALGQVDRGARYPPVPMRAEPIGGYLIALDGPFLGVLGPGVVARARALPPDTDLRALIDRLMPNGAAKQKPDMQGATFMLDRRYDPVVGRTVIRFARRLDDDDGRPFGWLVLNGRFRLDDIMSPQSDDEDVAVLAADGRVVFGRPRDPALIARAMADAGAQSGKHVVVRRIGTRFAIVDSLSDTGLTMAATFSWRSVARATAVGVSVTLGAALFTVAMLWITIVTFDRRALRPAHRRAIRLIESEAFNRTLIHTAPAGLLLLAAADGETMVRNDAALAYEDGASGLPLGKRIWQACRERQRAGTGERRFVMQQELAVERAGHDTTYLAAHIVRTKFRGVAVLLCTLTDVTARRLTENKLREARVAADDANKAKSTFLATMSHEIRTPLNAIVGNLELMERAELPSVERQRLKTIVSSSDALLRVINDVLDLSKAESNQMALEQIPFDLRRVLQDVAAIFRPLAEAKGLTLECDVAAELADGHVGDPTRLRQLVSNLVGNAIKFTEYGGIAIDARRVRGGDGAGEVEIAVRDTGVGIPEDALPTLFDVYMQADASIYRRFGGTGLGLPLCRRIARLMHGELTVESQVGSGSTFVATLPLPAAPAGWRSAEPEPDTALAPQQRTDVQPLRVLVAEDHPASRALLRDQLDALGHDATIVENGVEAMRAYFEHPFDVVLTDLSMPQLDGFALANFLREQGASVPVIAMTAHATDDDRRRCAQVGVAEVVLKPLSIDVLDEALQRHGGQRGVRAEQAQSGAHEQAPAVTGEIRHALREATLRSLGAIEAALSAGNTNALVIELHSMRGGFALAGDSVARDACAQMEATVKSGGAAAFESHWDAFRSAIEHAMERIGQ
>NZ_CP046608.1|WP_039369771.1|287714_288389_+|response-regulator
MDEFFVRVMVADDHPSAAIGMSQALAESSTIRLVGSVSNSTDLVTALDEKPSDVLVVDYVMPGGKFGDGLVLLAFLQRRYPALRLVTITMIDNPSVLHAIRKQGVGCILSKSDAISHLVGAVHAAYVGANYLSPHIKQLLESTGTSDTARPLTTREIEVVRLFGSGYTVGEIATQLHRSKQTISSQKASAMKKLGIARDADLIRYASDGNLADPAAPDAPAASE
>NZ_CP046608.1|WP_046544081.1|305272_308632_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALVWNQAQGCWSAVGETARRRAKPGSAKRVAAALSLLGIVSLPAFALPSGENITAGKADILRDADGKSMRIDQHTDKLITNWNDFNIAGGERVSFYQPGKQSIALNRVIGNNGSQIQGQLDANGKVFLVNPNGVLFGSGAQINVGGLVASTQNITDENFLAGNYRFSGDSTASIVNDGRITAADGGSVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTARAAGDLLNAVVNNTGTIEAKGLASRAGKITLDGGTVLVGGKLDASAAEAGAPAGSILTRGEQVRVVRGTTVDTRAGNTAGTWTIEAANAGVAKNNAYSLYPAGVSIDADTLSNNLGTTNVALTNTQGDLTVAGPVAWNSDRALTLTSQKGNVDLQQTLSATGANASLNVNAADKIRINDAVKLTGRNAHLELNSKNGHSVNNGAAVTLSGDNASFRSNGEDYKVLHTIADLRNVDANRGGRYVIGNTIDGANTNLRSIGGTQSFYGVFDGLGNTVTRLRISNPGQSNVGLFSHNAGRIANLNLSDIVTTASGVPYWVTSVGTLAGGNTGTISNVTANNVTVSATGQTVVGGLVGSNYGGTIERAKVSGRIEGDRYAYVIGGLVGENLTRLNQPPISASIRDSHADVRIDAAHDGLTGGLVGHNTGMIERSSSAASINASAANAKVGGLVGLNDDNGLIKQSSSSATVTARNNAIAGGLVGVNLGGIESSTADGNVFADASSTIGGLVGTNSGRIRASRANGNVTAGTQALAGGFAGYNDGDIDASTATGNVVAGADSIVGGFVGRNGTAGRIHASDAQGHVRALGKSTLGGFAGTNDGFIETSLASGKVAGDYSATVGGFVGVNAGRIEASDASGDVVAGYNAIAGGFAGTNAGTLDSSNASGNVIALENSSAGGLVGYNVGRILTSSAKGNVSTRYSSRAGGLVGRNFGTIADSRATGLVKAGDFSSVGGLVGSNERGSIVRSTASGDVEGGAQSNVGGLVGSQTGTVDQSRATGSARGGFASYVGGLVGNNGGTITASSSSNGTVSGGQYARLGGLVGGNFGSIYGSSSTSRVDVKAGYDQFYGPLVGLNYGLVKP
>NZ_CP046608.1|WP_082139546.1|308805_310515_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRRARPLLRSDSIADRRSGRLRIACLTSLALSLHGIAHAQAQVPNAGQSLRDVETLRPTLPVPAAPDLAMPPSDEAPSSATAEGPRIPVSAFAIEGNAAIPAARLDALLVDLVGRELSFGDLQQAAARITAYYREHGYVLARAYLPHQDIEHGVVRIAVVEGRYGQLELHNRTRVLDRALRQPLASLQPGEIVSGNRLERSLMLLNEMPGVDAKGTLRPGAEPGTTDLVIDAERSRFATGSVEFDNFGDPLTGRYRATGSIDVNAPLRLGDRFSLRGLTSNTNQRYYRASYQVPVGPASTRVGIAYSDMNYRIGGSLKELRYHGGADVRSAFVTQPLLRSRRTSVDAQVTYENKHLRDVYGIFDVVGDKTVDLWSFGVSGNRQDGFGGGGRTGFSATVGIGHLSSNDPLDMNYYAHTLGQFAKLNINALRLQALGSRFQLYTQFSAQLSSRNLDSSEKFNLGGPYGVRAFALGAGSGDQGWQATAELRYLVAPGWQLSTFADTGRIQLSKQRWSRERNTVQLSSLGIGASWYGSRHQVSVTAALPVGYTDQVASPTRSPSVWLQAAQYF
>NZ_CP046608.1|WP_039371479.1|311128_312145_-|1-aminocyclopropane-1-carboxylate-deaminase
MNLQRFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVSDGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQLGFRFDYIVVCSVTGSTQAGMVVGFAADGRADRVIGIDASATPERTHEQITRIARHTAELVDLGRPITAADVVLDTRYAGPEYGLPNDGTLEAIRLCARLEGMLTDPVYEGKSMHGMIDKVRLGEFEPGSKVLYAHLGGVPALSAYSGIFREG
>NZ_CP046608.1|WP_039371476.1|312342_312843_+|Lrp/AsnC-family-transcriptional-regulator
MKLDRGRASPTDAAPALDRIDRAILRQLQQDASISNVSLAAKVKLSAPACLRRVERLKEMGLIRGIVALLDPKPLGAGMLVVIGFVLDRSTPEAFAAFEKAAQKVSGCVECHVVTGEFDYFMLVRTRDNDSFNRLHAEQLLYLPGVRQVRSFMVLKEILSTHALPL
>NZ_CP046608.1|WP_039371474.1|313087_314809_+|ubiquinone-dependent-pyruvate-dehydrogenase
MAKQTMAEYLAKTLAAAGVERIWGVTGDSLNGLSFSLGQIGSIRWMHTRHEESAAFAAGADAASTGRLAVCAGSCGPGNLHLINGLYDCHRNHQPVLAIAAHIPSTEIGLGYFQETHPQELFRECSHFAELVTNASQFPRVLARAMRTAIEERGVAVIVLPGDIALGDGPDELPAWSESAPPSILPADADLDRLAALLNASDAVTLLCGSGTQSAHDEVVALADTLGAPVVHALRGKQFVEWDNPFDVGMTGLIGFSSGYHAMESCDTLLMLGTDFPYRPFYPSNAKVAQIDWKGSQLGHRAPLALGLVGTVKETIAALLPRLTRKTQRRFLENALKHYAAARKGLDDLAVAEPPGRAIHPQYLTKIVDEVAAEDAIFTADVGTPTLWAARYLTMNGKRQLHGSFNHGSMANAMPQALGAQGAHPGRQVVSLSGDGGLSMLLGDLLTARQLKLPIKIVVYNNSLLGFVSMELKAAGYLDTNVDLSPTDFAAIAKGAGIFSVRVEHSENVEEALRMAFAHDGPAVVDVVTSKYELAMPPKIELAHAKGFSLFMLRAILSGRGDEIVELARTNLR
>NZ_CP046608.1|WP_039371471.1|314914_315355_+|GNAT-family-N-acetyltransferase
MAIEIRAYEASDLHTLSAIWFDASLLAHAFLGEARLREQRALIEAVYLPKAETWVACRAGEPVGFIGLLDDSIGGLFVAPAMHGHGIGRALVEHALALKGALDLEVYADNLDARAFYARLGFDEISRRDGDDEGLPFVNILMRSTR
>NZ_CP046608.1|WP_039371468.1|315696_316287_+|methyltransferase-domain-containing-protein
MMWPNAWRVSALFVREWVGRPAAVGALCPSSRQLAREMADAVPDGDGLVVELGGGTGAITAALLERGVAPRRLVVVERSPAFVQHLRRRFPGITIVSGDARQLERLLPPDAHVDAIVSCLPLRTLPRQDVAAIVDQCHRVLSADGVMIQFTYDLRPPGRHPLGDSAFVACGSRIVWANIPPARIVTVRSVTAEHAE
>NZ_CP046608.1|WP_039371485.1|316441_317875_+|sulfatase-like-hydrolase/transferase
MNRIKLAALLCAGAFALAGCGSDDGPTSTAPGPVQAAARNVIFFLGDGMGITTMTAARIYAVGEDGALTIDTLPETAFVKTYSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPTASLTGNCGANNGKSATTLLEIAKAKGLATGVVTTTRVTHATPAATYAHVCHRDAENDIAAQLVPGGAGYNGALGDGVDVVLGGGTQFFVPKDGGGKRTDGRNLVNELKAKGYAVAQNRDDLLAADATKGGKLVGLFSSSHMSYDLDRGATKEPSLTDMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVAFDNAIKATIDKVRQTDPDLKNTLIVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRSYQTGSVAKDADGAPYTIIGFGNGENRVQGSRAGTALTDAVTGADDYRQEAVVRMDKGSETHGGTDVFLGAIGRGADAFHGVIENNKVFELVRNAVQL
>NZ_CP046608.1|WP_039371465.1|317907_319299_+|sulfatase-like-hydrolase/transferase
MSTIKCIAAALAVAGFACGAAQAAGQAKNVIFFLGDGMGPTTVTASRIYKVGESGQLTMEKLARTARVKTFSNDAQTTDSAPSMAAYMTGVKMNNEVLSMSSDTRAVAPGNDANGNKTVNNCAPGNGQPVATLLELAKARGKAVGAITTTELTHATPAATYSHICHRDAQYDIAAQAAPGGAGYNAALGDGVDVLMGGGRNHWTPFDPVANKRGRADGRNLLNEMKAKGYTVVATRDQLAQAGNGKLVGLFSSTSHLEYELDRVAGKGEGPTQPSLAEMTSKAIDVLSKNSNGYFLMVEGGRIDHALHGTNAKRALEDTAAFDEAIRVALSKVDLSNTLIVVTADHDHTMTINGYSKRGNPILDISRNYRDGQPSKDADGNTYTTLVFGNGANRPNVRASVDSATATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGADAKAFKGTIDNTKVFGLVRSAFGF
>NZ_CP046608.1|WP_039371462.1|319332_320073_+|hypothetical-protein
MKRQLLYALACGWVALPALAAADLDAVLVHESRTVSADGVTRTTMYRERMVRRDAHVWVERVLPVAAAGGHGNDHDHDHDHDAGARTGVQPAAAHAGHKHFNFQAAARHVTYDGKTARIEYVDTANRTVVSVPPAEYETTGFDGSWDNAYYVTPPSQLKRLAVAKRGDTPGTRWYEQAVDTPGARGVNRILWSEKLQAPLSVEFRSADGRVVRKLTLTPATAARHETLPWQTLAGYSRKEYADYLD

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Crispr_ID: NZ_CP046608_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046608_2

302622-302877

Orphan

Consensus_repeat	Method
GCCGACGAGGCCGCCGACCAGGCTG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP046608_2

>merge|NZ_CP046608|2|302622-302877|CRISPRCasFinder
TCCTGCGAACCCGCCCGCCAGGCTGGCATGACCGGCCTCGACGTTGCCCGTCGCGCTCGACGTATCGATGACGCCAAGGTTGTTGCCGACGAACCCGCCCACCATGCCGGCGATCGAGGCCGTGACCATGCCGCTCGCGCGTGATGCGCTGACGTCGCCGTGGTTCGTGCCGACCGCGCCGCCCGCGACGCTGTTCTCCCCGACCCGGATCGAGCCGCCGGCCTTCGAGTGGGCGAGCAGGCCGGCGTTCAGACCG

>NZ_CP046608|2|2|302622-302877|CRISPRCasFinder
TCCTGCGAACCCGCCCGCCAGGCTG	GCATGACCGGCCTCGACGTTGCCCGTCGCGCTCGACGTATCGATGACGCCAAGGTTGTT
GCCGACGAACCCGCCCACCATGCCG	GCGATCGAGGCCGTGACCATGCCGCTCGCGCGTGATGCGCTGACGTCGCCGTGGTTCGT
GCCGACCGCGCCGCCCGCGACGCTG	TTCTCCCCGACCCGGATCGAGCCGCCGGCCTTCGAGTG
GGCGAGCAGGCCGGCGTTCAGACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_046197024.1\|297278_297785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_135370735.1\|296211_297231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|374909
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP046608.1\|WP_039369771.1\|287714_288389_+\|response-regulator	unknown	unknown	gnl\|CDD\|182771
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226472
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371462.1\|319332_320073_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_CP046608.1\|WP_039369777.1\|292007_292556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_046544081.1\|305272_308632_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|214908
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	unknown	unknown	gnl\|CDD\|183494

Protein	Function_ID	Function_description	E-value
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	7.82215e-45
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	2.56861e-123
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	gnl\|CDD\|374909	pfam16967, TcfC, E-set like domain. TcfC is a family of bacterial fimbrial proteins. These sit in the outer bacterial membrane surrounding the RcpA proteins of the fimbrial shaft. This family is from Gamma-proteobacteria. This domain represents an immunoglobulin like E-set domain.	1.55611e-11
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP046608.1\|WP_039369771.1\|287714_288389_+\|response-regulator	gnl\|CDD\|182771	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional.	2.04329e-46
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.01216e-88
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	1.59005e-37
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.0081e-15
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	6.30767e-08
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	4.59687e-35
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	8.34452e-130
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	2.13638e-20
NZ_CP046608.1\|WP_046544081.1\|305272_308632_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	5.9701e-20
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	4.77376e-114
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.65508e-13
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	gnl\|CDD\|183494	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0

>NZ_CP046608.1|WP_046197026.1|298982_302033_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALVWNPLHGRWIAVGETARRRAKPGSAKRVAAALSLLGIVSLPAFALPSGENITAGKADILRDADGKTMSINQHTDKLITNWKEFDIAGGERVTFYQPGKQSIALNRVVGNNGSQIQGQLDANGKVFLVNPNGVLFGSGAQINVGGLVASTQNIADADFLAGNYRFSGNSTASIVNDGRITAADGGGVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTARAAGDLLNAVVNNTGTIEAKGLASRAGKITLDGGTVLVGGKLDASAAEAGAPAGSIVTRGEQVRVARGTTVDTRAGNTAGTWAIEAANAGVANNNADTLYPAGASIDGDTLSNNLGTTNVALTNTQGDLTVGGPVAWNSDRSLTLTSQKGNVDLQQAVSSASANASLNVNAADKIRINDTIKLTGRNAHLELNSKNGHTLNKDVVVTLSGDNASFRSNGEDYKVLHNMADLRNVDANLGGRYVIGNAIDGANTSFRSIGGSGTFTGVFDGLGNTISRLSITGTGPNIGLFGQSTGYLANLTLDSLTVDGTSAARATFVGGLVGDNLGRIENVNAKNTSVSYNGRNMVMMGGLVGRNLGTIDRANFAGRVSGSANTLSVGGLASVNGGTIADSTASADVTLSGSSGSPFQGSYSREVQSIGGFVGTNNGEIVRSSSRGRVSGRDDTSTGGFVGINFGTIRNASANATVTAGKGSYVGGFAGKIRDDGTIANASASGPVWANGALAIGGFVGDNAGGTLDGVQSDGDVTDLASGHVGGLAGRNGGTIRHAQARSTVTTGRNSHAGGLVGTNDGAVSNSSATGRVSAGEASDAGGLVGLNTGELDTVTATGNVTAGNGSRVGGLVGTNQGNRAIVRHAATTGNVGANNSTVGGLVGLNDQGAVIDDASSTGTIAGTFSTLGGLVGENAGTIRASTSSSRIDPASTIYGGRSWGTLVGYNNRSGNIEASSVEGAAQPYYMVGLSIGKINGQWYYGPVDR
>NZ_CP046608.1|WP_039369787.1|297909_298551_+|hypothetical-protein
MATLAFPISAAAAIDMVPKDVTLKETVTSVEVINNGDRAEYVSVSLSRLLNPGVPFENERLEPVGEIDQPSIYASPFRMSLAPGQTKTIAIKVLRPVDTETVYRLDVKPVIKVLGTGHAKSSASVVANLAFSGIVRQMPSKTRAALAVACEASGARLTATGNVHYRVEGAKADGQRLDDFNVYPGVPLPVPGRIVDIPGHSVCGAAAAKSPLP
>NZ_CP046608.1|WP_046197024.1|297278_297785_+|hypothetical-protein
MLPAVLLAEPVKLTGKTTSRVTAHVSRPNNLFVTDDKGGWFDQGLQMQQLGGWDTPYEVQARLKIVSTSGVFQVRLDSPLTITHQSKPTLVFRTPTVKLAPEGGVPKPLLVGQGTEFQNPAASGARDDSVGYYNLDIAAYPPTGNFKDNTGTYKGVLSMTFEPVIKAP
>NZ_CP046608.1|WP_135370735.1|296211_297231_+|hypothetical-protein
MNRISRERGSFGRWCKVVLLFFLAMSVGRAYGYILVLDNLSNGYSGCSWVDNGNGTSTVSVSIDYKSVVGHLGGRLFTSRGILIYTYNRNGELNPSANVARAMNINGKPYESAFVGTGYVMYKNSNYPGPSTGDWTNGSPFIANVVATVSNSVIADWPAIGIRAGNYTDGDDVGEVTGVAYIRFGENRGVCNIVVNPEVPPPPVEITMNMTAPDWNLGDLGQGDSKKTFSDTANQLCFTYPGSVVTGVRFIVNAKNVNGEVANRYRLKNVDDASQFVPYSIKLDGGGSTLSLPNSSNMAMRFASSGKTCFVPTFETTVDSNVKEGDYVDVLIFTVVTPS
>NZ_CP046608.1|WP_052760189.1|295655_296132_+|hypothetical-protein
MNRALCRALGALLLLWSSGSFAAGILKLSRTELTLAPDKPANELWVENVGDTPLYLDITQQRVLNPGHLPEQLVPVEEVSQPTLLVLPTRLALSPGQKYRMALKELSMPDESQVWRVTFRPREHIVVDADRDGDTTAPLFVSVGYGVVIYQSLAGAVR
>NZ_CP046608.1|WP_148668959.1|294969_295656_+|pilus-assembly-protein
MNFNAKHWALALVALACATVRPALAEGELMVMPAATRVYATHDQKVTVRNMGDAPLFLSITLQKIMNPGVTPEKKVDLGQLDNPGMLASPDKLTLGPGQSRQIELKSLTDPAQEEVYRLYVVPIRSLKVEDAPADKITAPMSVAIGYGVLVRHLPPPGKLNVAWTHRCEDGGITLESTGNVRTLFSNASYDGVKQPQTIAVFPGTPQHFATKRMTLSVQDEPKTLQCP
>NZ_CP046608.1|WP_039369805.1|292805_294965_+|fimbrial-protein
MDDSARYVATFNGKTLPGFVRYSATESVLEFDAAKYAANGVSPDDVDTIRNVVSKIDYKRCSKGCDIEVDGYYVTIDKLRRSISIRNSREDYFAPETTFGLVNNQSVDFRASSNGYRAANLNGATWVGLPSRSFGYVSWYANRTQTRGTSYGSQGVSSYYLQKNFAGTYLRAGKQNSIDYASGSVSTLLSPSFDQFVTFGSQSNLQVNRDAGSLVLYATAEGNYEFYRNGRLIMKRPAALGRNEISFADLPGGYYPVQVRLVDRNGNLVSQEIREINNVNFGAGGGNAWHFTVGKEMSDRGGFLMEGAMSRNFRQFYMNASTLVGRGGDWAAEVNVTRPTKIGDVDVTPTLGVLAGERKAGGYVSLAASSEALGSLSASRYLNNDVSRFYAGTSSTSVTYSRMVRKATVGYNYQQSGFGATHQAEVRWNYRPNGLWATFALGVQKGSFSRTSGGYGVYFNMTMQLDKVQASFSAARSGGQTQLSGDYRKDFQDGFGTTTLGVTGNRINSDYGINVYGSRSGTRGDASLNLGYNGDASNVDFNYRGMVAASKDGVAFGRYSNGGSAMLLRTPKLDGMRYGFNVEGSPVGGGSTYAVPLNTYTDVAFARVYSNSDKLDMNIEVPANIVRAHPGQVYAAQAKVDINMVYSGFLKDTEGKPISGKVVETGDVVHRNGLFSIVSKTMLSQVTVDGDGHRYTCSLKDASGNDFRCELPGLKESKE
>NZ_CP046608.1|WP_039369777.1|292007_292556_+|hypothetical-protein
MKLSKLVLAMGVTTALFGMAHTAQADTVSKKVTLTAQINDGIFVSKPDGSTWYGTEELEANDYTQTKFSKTLPVRVYTKNPDFNISLASPLKLTNGNYEMKNAKVTLGSAAGDSEVKFGAVQKVTQTVSGNGGFDEVHNLKINVDAPTMVGTNSTNGSYSGDLVMVFEPLAAAGGGDTPASK
>NZ_CP046608.1|WP_039369774.1|288529_291532_+|hybrid-sensor-histidine-kinase/response-regulator
MPAKLKRLLAHAAAVGRKPFDPGRVRRQQQMLLYGGGCAITAFIVVCAALVVRLDVQDSLERARSTFLQREAEFYANLQTLDRMLAMLGNRTEELWRKGAPPPQDALRAFAADHGRLAASNAGGGTPFFAMAEVTPARPAESYARYLGAALGQVDRGARYPPVPMRAEPIGGYLIALDGPFLGVLGPGVVARARALPPDTDLRALIDRLMPNGAAKQKPDMQGATFMLDRRYDPVVGRTVIRFARRLDDDDGRPFGWLVLNGRFRLDDIMSPQSDDEDVAVLAADGRVVFGRPRDPALIARAMADAGAQSGKHVVVRRIGTRFAIVDSLSDTGLTMAATFSWRSVARATAVGVSVTLGAALFTVAMLWITIVTFDRRALRPAHRRAIRLIESEAFNRTLIHTAPAGLLLLAAADGETMVRNDAALAYEDGASGLPLGKRIWQACRERQRAGTGERRFVMQQELAVERAGHDTTYLAAHIVRTKFRGVAVLLCTLTDVTARRLTENKLREARVAADDANKAKSTFLATMSHEIRTPLNAIVGNLELMERAELPSVERQRLKTIVSSSDALLRVINDVLDLSKAESNQMALEQIPFDLRRVLQDVAAIFRPLAEAKGLTLECDVAAELADGHVGDPTRLRQLVSNLVGNAIKFTEYGGIAIDARRVRGGDGAGEVEIAVRDTGVGIPEDALPTLFDVYMQADASIYRRFGGTGLGLPLCRRIARLMHGELTVESQVGSGSTFVATLPLPAAPAGWRSAEPEPDTALAPQQRTDVQPLRVLVAEDHPASRALLRDQLDALGHDATIVENGVEAMRAYFEHPFDVVLTDLSMPQLDGFALANFLREQGASVPVIAMTAHATDDDRRRCAQVGVAEVVLKPLSIDVLDEALQRHGGQRGVRAEQAQSGAHEQAPAVTGEIRHALREATLRSLGAIEAALSAGNTNALVIELHSMRGGFALAGDSVARDACAQMEATVKSGGAAAFESHWDAFRSAIEHAMERIGQ
>NZ_CP046608.1|WP_039369771.1|287714_288389_+|response-regulator
MDEFFVRVMVADDHPSAAIGMSQALAESSTIRLVGSVSNSTDLVTALDEKPSDVLVVDYVMPGGKFGDGLVLLAFLQRRYPALRLVTITMIDNPSVLHAIRKQGVGCILSKSDAISHLVGAVHAAYVGANYLSPHIKQLLESTGTSDTARPLTTREIEVVRLFGSGYTVGEIATQLHRSKQTISSQKASAMKKLGIARDADLIRYASDGNLADPAAPDAPAASE
>NZ_CP046608.1|WP_046544081.1|305272_308632_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALVWNQAQGCWSAVGETARRRAKPGSAKRVAAALSLLGIVSLPAFALPSGENITAGKADILRDADGKSMRIDQHTDKLITNWNDFNIAGGERVSFYQPGKQSIALNRVIGNNGSQIQGQLDANGKVFLVNPNGVLFGSGAQINVGGLVASTQNITDENFLAGNYRFSGDSTASIVNDGRITAADGGSVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTARAAGDLLNAVVNNTGTIEAKGLASRAGKITLDGGTVLVGGKLDASAAEAGAPAGSILTRGEQVRVVRGTTVDTRAGNTAGTWTIEAANAGVAKNNAYSLYPAGVSIDADTLSNNLGTTNVALTNTQGDLTVAGPVAWNSDRALTLTSQKGNVDLQQTLSATGANASLNVNAADKIRINDAVKLTGRNAHLELNSKNGHSVNNGAAVTLSGDNASFRSNGEDYKVLHTIADLRNVDANRGGRYVIGNTIDGANTNLRSIGGTQSFYGVFDGLGNTVTRLRISNPGQSNVGLFSHNAGRIANLNLSDIVTTASGVPYWVTSVGTLAGGNTGTISNVTANNVTVSATGQTVVGGLVGSNYGGTIERAKVSGRIEGDRYAYVIGGLVGENLTRLNQPPISASIRDSHADVRIDAAHDGLTGGLVGHNTGMIERSSSAASINASAANAKVGGLVGLNDDNGLIKQSSSSATVTARNNAIAGGLVGVNLGGIESSTADGNVFADASSTIGGLVGTNSGRIRASRANGNVTAGTQALAGGFAGYNDGDIDASTATGNVVAGADSIVGGFVGRNGTAGRIHASDAQGHVRALGKSTLGGFAGTNDGFIETSLASGKVAGDYSATVGGFVGVNAGRIEASDASGDVVAGYNAIAGGFAGTNAGTLDSSNASGNVIALENSSAGGLVGYNVGRILTSSAKGNVSTRYSSRAGGLVGRNFGTIADSRATGLVKAGDFSSVGGLVGSNERGSIVRSTASGDVEGGAQSNVGGLVGSQTGTVDQSRATGSARGGFASYVGGLVGNNGGTITASSSSNGTVSGGQYARLGGLVGGNFGSIYGSSSTSRVDVKAGYDQFYGPLVGLNYGLVKP
>NZ_CP046608.1|WP_082139546.1|308805_310515_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRRARPLLRSDSIADRRSGRLRIACLTSLALSLHGIAHAQAQVPNAGQSLRDVETLRPTLPVPAAPDLAMPPSDEAPSSATAEGPRIPVSAFAIEGNAAIPAARLDALLVDLVGRELSFGDLQQAAARITAYYREHGYVLARAYLPHQDIEHGVVRIAVVEGRYGQLELHNRTRVLDRALRQPLASLQPGEIVSGNRLERSLMLLNEMPGVDAKGTLRPGAEPGTTDLVIDAERSRFATGSVEFDNFGDPLTGRYRATGSIDVNAPLRLGDRFSLRGLTSNTNQRYYRASYQVPVGPASTRVGIAYSDMNYRIGGSLKELRYHGGADVRSAFVTQPLLRSRRTSVDAQVTYENKHLRDVYGIFDVVGDKTVDLWSFGVSGNRQDGFGGGGRTGFSATVGIGHLSSNDPLDMNYYAHTLGQFAKLNINALRLQALGSRFQLYTQFSAQLSSRNLDSSEKFNLGGPYGVRAFALGAGSGDQGWQATAELRYLVAPGWQLSTFADTGRIQLSKQRWSRERNTVQLSSLGIGASWYGSRHQVSVTAALPVGYTDQVASPTRSPSVWLQAAQYF
>NZ_CP046608.1|WP_039371479.1|311128_312145_-|1-aminocyclopropane-1-carboxylate-deaminase
MNLQRFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVSDGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQLGFRFDYIVVCSVTGSTQAGMVVGFAADGRADRVIGIDASATPERTHEQITRIARHTAELVDLGRPITAADVVLDTRYAGPEYGLPNDGTLEAIRLCARLEGMLTDPVYEGKSMHGMIDKVRLGEFEPGSKVLYAHLGGVPALSAYSGIFREG
>NZ_CP046608.1|WP_039371476.1|312342_312843_+|Lrp/AsnC-family-transcriptional-regulator
MKLDRGRASPTDAAPALDRIDRAILRQLQQDASISNVSLAAKVKLSAPACLRRVERLKEMGLIRGIVALLDPKPLGAGMLVVIGFVLDRSTPEAFAAFEKAAQKVSGCVECHVVTGEFDYFMLVRTRDNDSFNRLHAEQLLYLPGVRQVRSFMVLKEILSTHALPL
>NZ_CP046608.1|WP_039371474.1|313087_314809_+|ubiquinone-dependent-pyruvate-dehydrogenase
MAKQTMAEYLAKTLAAAGVERIWGVTGDSLNGLSFSLGQIGSIRWMHTRHEESAAFAAGADAASTGRLAVCAGSCGPGNLHLINGLYDCHRNHQPVLAIAAHIPSTEIGLGYFQETHPQELFRECSHFAELVTNASQFPRVLARAMRTAIEERGVAVIVLPGDIALGDGPDELPAWSESAPPSILPADADLDRLAALLNASDAVTLLCGSGTQSAHDEVVALADTLGAPVVHALRGKQFVEWDNPFDVGMTGLIGFSSGYHAMESCDTLLMLGTDFPYRPFYPSNAKVAQIDWKGSQLGHRAPLALGLVGTVKETIAALLPRLTRKTQRRFLENALKHYAAARKGLDDLAVAEPPGRAIHPQYLTKIVDEVAAEDAIFTADVGTPTLWAARYLTMNGKRQLHGSFNHGSMANAMPQALGAQGAHPGRQVVSLSGDGGLSMLLGDLLTARQLKLPIKIVVYNNSLLGFVSMELKAAGYLDTNVDLSPTDFAAIAKGAGIFSVRVEHSENVEEALRMAFAHDGPAVVDVVTSKYELAMPPKIELAHAKGFSLFMLRAILSGRGDEIVELARTNLR
>NZ_CP046608.1|WP_039371471.1|314914_315355_+|GNAT-family-N-acetyltransferase
MAIEIRAYEASDLHTLSAIWFDASLLAHAFLGEARLREQRALIEAVYLPKAETWVACRAGEPVGFIGLLDDSIGGLFVAPAMHGHGIGRALVEHALALKGALDLEVYADNLDARAFYARLGFDEISRRDGDDEGLPFVNILMRSTR
>NZ_CP046608.1|WP_039371468.1|315696_316287_+|methyltransferase-domain-containing-protein
MMWPNAWRVSALFVREWVGRPAAVGALCPSSRQLAREMADAVPDGDGLVVELGGGTGAITAALLERGVAPRRLVVVERSPAFVQHLRRRFPGITIVSGDARQLERLLPPDAHVDAIVSCLPLRTLPRQDVAAIVDQCHRVLSADGVMIQFTYDLRPPGRHPLGDSAFVACGSRIVWANIPPARIVTVRSVTAEHAE
>NZ_CP046608.1|WP_039371485.1|316441_317875_+|sulfatase-like-hydrolase/transferase
MNRIKLAALLCAGAFALAGCGSDDGPTSTAPGPVQAAARNVIFFLGDGMGITTMTAARIYAVGEDGALTIDTLPETAFVKTYSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPTASLTGNCGANNGKSATTLLEIAKAKGLATGVVTTTRVTHATPAATYAHVCHRDAENDIAAQLVPGGAGYNGALGDGVDVVLGGGTQFFVPKDGGGKRTDGRNLVNELKAKGYAVAQNRDDLLAADATKGGKLVGLFSSSHMSYDLDRGATKEPSLTDMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVAFDNAIKATIDKVRQTDPDLKNTLIVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRSYQTGSVAKDADGAPYTIIGFGNGENRVQGSRAGTALTDAVTGADDYRQEAVVRMDKGSETHGGTDVFLGAIGRGADAFHGVIENNKVFELVRNAVQL
>NZ_CP046608.1|WP_039371465.1|317907_319299_+|sulfatase-like-hydrolase/transferase
MSTIKCIAAALAVAGFACGAAQAAGQAKNVIFFLGDGMGPTTVTASRIYKVGESGQLTMEKLARTARVKTFSNDAQTTDSAPSMAAYMTGVKMNNEVLSMSSDTRAVAPGNDANGNKTVNNCAPGNGQPVATLLELAKARGKAVGAITTTELTHATPAATYSHICHRDAQYDIAAQAAPGGAGYNAALGDGVDVLMGGGRNHWTPFDPVANKRGRADGRNLLNEMKAKGYTVVATRDQLAQAGNGKLVGLFSSTSHLEYELDRVAGKGEGPTQPSLAEMTSKAIDVLSKNSNGYFLMVEGGRIDHALHGTNAKRALEDTAAFDEAIRVALSKVDLSNTLIVVTADHDHTMTINGYSKRGNPILDISRNYRDGQPSKDADGNTYTTLVFGNGANRPNVRASVDSATATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGADAKAFKGTIDNTKVFGLVRSAFGF
>NZ_CP046608.1|WP_039371462.1|319332_320073_+|hypothetical-protein
MKRQLLYALACGWVALPALAAADLDAVLVHESRTVSADGVTRTTMYRERMVRRDAHVWVERVLPVAAAGGHGNDHDHDHDHDAGARTGVQPAAAHAGHKHFNFQAAARHVTYDGKTARIEYVDTANRTVVSVPPAEYETTGFDGSWDNAYYVTPPSQLKRLAVAKRGDTPGTRWYEQAVDTPGARGVNRILWSEKLQAPLSVEFRSADGRVVRKLTLTPATAARHETLPWQTLAGYSRKEYADYLD

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Crispr_ID: NZ_CP046608_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046608_3

305385-305839

Orphan

Consensus_repeat	Method
TTGCTGCCGACGAGGCCGCCGACATAGCT	PILER-CR
TGCCGACGAGGCCGCCGACATAGCT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP046608_3

>merge|NZ_CP046608|3|305385-305839|PILER-CR,CRISPRCasFinder
TTGCCGCCGACGAGGCCGCCGAGCCGCGCGTACTGGCCGCCGGATACGGTGCCGTTCGACGACGACGACGCGGTGATGGTGCCGCCGTTGTTGCCGACGAGGCCGCCGACATAGCTGGCGAAGCCGCCCCGGGCGGAGCCCGTCGCACGCGACTGGTCGACAGTCCCGGTCTGGCTGCCGACGAGGCCGCCGACATTGCTCTGCGCGCCGCCTTCGACGTCGCCCGACGCCGTCGACCGGACGATGCTGCCCCGCTCGTTGCTGCCGACGAGGCCACCGACCGACGAGAAGTCGCCCGCCTTCACCAGGCCCGTCGCACGGGAATCGGCGATCGTGCCGAAGTTGCGTCCGACGAGGCCGCCTGCGCGGCTCGAGTACCGGGTCGATACGTTGCCCTTGGCGCTCGACGTGAGGATGCGGCCCACGTTGTACCCGACGAGACCGCCTGCCGAGCT

>NZ_CP046608|3|1|305385-305584|PILER-CR
TTGCCGCCGACGAGGCCGCCGAGCCGCGC	GTACTGGCCGCCGGATACGGTGCCGTTCGACGACGACGACGCGGTGATGGTGCCGCCGTTGTTGC
CGACGAGGCCGCCGACATAGCTGGCGAAG	CCGCCCCGGGCGGAGCCCGTCGCACGCGACTGGTCGACAGTCCCGGTCTGGCTGC
CGACGAGGCCGCCGACATTGCT

>NZ_CP046608|3|3|305476-305839|CRISPRCasFinder
TGCCGACGAGGCCGCCGACATAGCT	GGCGAAGCCGCCCCGGGCGGAGCCCGTCGCACGCGACTGGTCGACAGTCCCGGTCTGGC
TGCCGACGAGGCCGCCGACATTGCT	CTGCGCGCCGCCTTCGACGTCGCCCGACGCCGTCGACCGGACGATGCTGCCCCGCTCGTTGC
TGCCGACGAGGCCACCGACCGACGA	GAAGTCGCCCGCCTTCACCAGGCCCGTCGCACGGGAATCGGCGATCGTGCCGAAGTTGC
GTCCGACGAGGCCGCCTGCGCGGCT	CGAGTACCGGGTCGATACGTTGCCCTTGGCGCTCGACGTGAGGATGCGGCCCACGTTGT
ACCCGACGAGACCGCCTGCCGAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_046197024.1\|297278_297785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_135370735.1\|296211_297231_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|224699
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	unknown	unknown	gnl\|CDD\|374909
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226472
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_046544080.1\|302186_305093_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|214908
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371462.1\|319332_320073_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|236715
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183009
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_CP046608.1\|WP_039369777.1\|292007_292556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237939
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	unknown	unknown	gnl\|CDD\|183494
NZ_CP046608.1\|WP_039371458.1\|320202_321342_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748

Protein	Function_ID	Function_description	E-value
NZ_CP046608.1\|WP_039371476.1\|312342_312843_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	7.82215e-45
NZ_CP046608.1\|WP_039371465.1\|317907_319299_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	2.56861e-123
NZ_CP046608.1\|WP_039369805.1\|292805_294965_+\|fimbrial-protein	gnl\|CDD\|374909	pfam16967, TcfC, E-set like domain. TcfC is a family of bacterial fimbrial proteins. These sit in the outer bacterial membrane surrounding the RcpA proteins of the fimbrial shaft. This family is from Gamma-proteobacteria. This domain represents an immunoglobulin like E-set domain.	1.55611e-11
NZ_CP046608.1\|WP_039371474.1\|313087_314809_+\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP046608.1\|WP_039369774.1\|288529_291532_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.01216e-88
NZ_CP046608.1\|WP_039371468.1\|315696_316287_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|226472	COG3963, COG3963, Phospholipid N-methyltransferase [Lipid metabolism].	1.59005e-37
NZ_CP046608.1\|WP_148668959.1\|294969_295656_+\|pilus-assembly-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.0081e-15
NZ_CP046608.1\|WP_046544080.1\|302186_305093_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	7.14072e-21
NZ_CP046608.1\|WP_052760189.1\|295655_296132_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	6.30767e-08
NZ_CP046608.1\|WP_039371458.1\|320202_321342_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	1.11002e-23
NZ_CP046608.1\|WP_039371471.1\|314914_315355_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|236715	PRK10562, PRK10562, putative acetyltransferase; Provisional.	4.59687e-35
NZ_CP046608.1\|WP_039371485.1\|316441_317875_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	8.34452e-130
NZ_CP046608.1\|WP_046197026.1\|298982_302033_-\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	2.13638e-20
NZ_CP046608.1\|WP_082139546.1\|308805_310515_-\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	4.77376e-114
NZ_CP046608.1\|WP_039369787.1\|297909_298551_+\|hypothetical-protein	gnl\|CDD\|237939	PRK15308, PRK15308, fimbrial protein TcfA.	2.65508e-13
NZ_CP046608.1\|WP_039371479.1\|311128_312145_-\|1-aminocyclopropane-1-carboxylate-deaminase	gnl\|CDD\|183494	PRK12390, PRK12390, 1-aminocyclopropane-1-carboxylate deaminase; Provisional.	0

>NZ_CP046608.1|WP_046544080.1|302186_305093_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALIWNQAQGCWSAVGETARRRAKPGSTKRVAAALSLLGVVSLPAFALPSGENITAGKADILRDADGKSMRIDQHTDKLITNWNDFNIAGGERVSFYQPGKHSIALNRVVGNNGSQIQGQLEANGKVFLVNPNGVLFGSGAQINVGGLVASTQNIADADFLAGNYRFSGNSTASIVNDGRITAADGGSVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTAQAAGNLLNAVVNNTGAIEAKGLASHAGKITLDGGTVLVGGKLDASAAEAGAPAGSILTRGEQVRVVRGTTVDTRAGNTAGTWTIEAANAGVAKNNAYSLYPAGVSIDADTLSNNLGTTNVALTNTQGDLTVAGPVAWNSDRALTLTSQKGNVDLQQTLSASANASLNVNAADKIRINDAVKLTGRNAHLELNSKNGHTLTNDAAVTLSGDNASFRSNGEDYKVLHTIADLRNVDANLGGRYVIGNTIDGANANFVSIGGATGNAFTGIFDGLGNTISRLAITNPGHHVVGLFGINRGRIANLELKGLSATGSAPRRTLLIGALAGDNFGTISNVTATDVTVSAAGRAYVGGLVGANRGGTIERARVSGRVDGDRETVAIGSLAGANLTLAQKNAPVARIADSHADVHVTTARGTAGGLVGINSGIVETSSSAGSVTMTGDTALIGGLVGHNEANGVVRNTSSTTTITAGNDVVAGGLVGLNAGLLAHSKAGGSIRVGENSVAGGAVGTNHGDVSASRASGMVTASIAGMVGGFVGNNLGVIDTSSATGNVEAGHASLAGGFAGSSRYVIRRASATGDVSAGDGSQVGGLVGQLSGLLDASTAAGAVSGGNVSLVGGLVGNNGGRIRTSSSSGTVSGGYTAKLGGLAGSNFGTVERSSTTSRIAYRSELAQRYGALAGINYGQLIGNTASGNGPDVPLVGFNAGRLQD
>NZ_CP046608.1|WP_046197026.1|298982_302033_-|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKTYALVWNPLHGRWIAVGETARRRAKPGSAKRVAAALSLLGIVSLPAFALPSGENITAGKADILRDADGKTMSINQHTDKLITNWKEFDIAGGERVTFYQPGKQSIALNRVVGNNGSQIQGQLDANGKVFLVNPNGVLFGSGAQINVGGLVASTQNIADADFLAGNYRFSGNSTASIVNDGRITAADGGGVALLGARVSNNGVIQAKMGRVALGAGNTFKVNFDGSDLLSLQVEGGAVDAQANNGGLLKADGGEVLMTARAAGDLLNAVVNNTGTIEAKGLASRAGKITLDGGTVLVGGKLDASAAEAGAPAGSIVTRGEQVRVARGTTVDTRAGNTAGTWAIEAANAGVANNNADTLYPAGASIDGDTLSNNLGTTNVALTNTQGDLTVGGPVAWNSDRSLTLTSQKGNVDLQQAVSSASANASLNVNAADKIRINDTIKLTGRNAHLELNSKNGHTLNKDVVVTLSGDNASFRSNGEDYKVLHNMADLRNVDANLGGRYVIGNAIDGANTSFRSIGGSGTFTGVFDGLGNTISRLSITGTGPNIGLFGQSTGYLANLTLDSLTVDGTSAARATFVGGLVGDNLGRIENVNAKNTSVSYNGRNMVMMGGLVGRNLGTIDRANFAGRVSGSANTLSVGGLASVNGGTIADSTASADVTLSGSSGSPFQGSYSREVQSIGGFVGTNNGEIVRSSSRGRVSGRDDTSTGGFVGINFGTIRNASANATVTAGKGSYVGGFAGKIRDDGTIANASASGPVWANGALAIGGFVGDNAGGTLDGVQSDGDVTDLASGHVGGLAGRNGGTIRHAQARSTVTTGRNSHAGGLVGTNDGAVSNSSATGRVSAGEASDAGGLVGLNTGELDTVTATGNVTAGNGSRVGGLVGTNQGNRAIVRHAATTGNVGANNSTVGGLVGLNDQGAVIDDASSTGTIAGTFSTLGGLVGENAGTIRASTSSSRIDPASTIYGGRSWGTLVGYNNRSGNIEASSVEGAAQPYYMVGLSIGKINGQWYYGPVDR
>NZ_CP046608.1|WP_039369787.1|297909_298551_+|hypothetical-protein
MATLAFPISAAAAIDMVPKDVTLKETVTSVEVINNGDRAEYVSVSLSRLLNPGVPFENERLEPVGEIDQPSIYASPFRMSLAPGQTKTIAIKVLRPVDTETVYRLDVKPVIKVLGTGHAKSSASVVANLAFSGIVRQMPSKTRAALAVACEASGARLTATGNVHYRVEGAKADGQRLDDFNVYPGVPLPVPGRIVDIPGHSVCGAAAAKSPLP
>NZ_CP046608.1|WP_046197024.1|297278_297785_+|hypothetical-protein
MLPAVLLAEPVKLTGKTTSRVTAHVSRPNNLFVTDDKGGWFDQGLQMQQLGGWDTPYEVQARLKIVSTSGVFQVRLDSPLTITHQSKPTLVFRTPTVKLAPEGGVPKPLLVGQGTEFQNPAASGARDDSVGYYNLDIAAYPPTGNFKDNTGTYKGVLSMTFEPVIKAP
>NZ_CP046608.1|WP_135370735.1|296211_297231_+|hypothetical-protein
MNRISRERGSFGRWCKVVLLFFLAMSVGRAYGYILVLDNLSNGYSGCSWVDNGNGTSTVSVSIDYKSVVGHLGGRLFTSRGILIYTYNRNGELNPSANVARAMNINGKPYESAFVGTGYVMYKNSNYPGPSTGDWTNGSPFIANVVATVSNSVIADWPAIGIRAGNYTDGDDVGEVTGVAYIRFGENRGVCNIVVNPEVPPPPVEITMNMTAPDWNLGDLGQGDSKKTFSDTANQLCFTYPGSVVTGVRFIVNAKNVNGEVANRYRLKNVDDASQFVPYSIKLDGGGSTLSLPNSSNMAMRFASSGKTCFVPTFETTVDSNVKEGDYVDVLIFTVVTPS
>NZ_CP046608.1|WP_052760189.1|295655_296132_+|hypothetical-protein
MNRALCRALGALLLLWSSGSFAAGILKLSRTELTLAPDKPANELWVENVGDTPLYLDITQQRVLNPGHLPEQLVPVEEVSQPTLLVLPTRLALSPGQKYRMALKELSMPDESQVWRVTFRPREHIVVDADRDGDTTAPLFVSVGYGVVIYQSLAGAVR
>NZ_CP046608.1|WP_148668959.1|294969_295656_+|pilus-assembly-protein
MNFNAKHWALALVALACATVRPALAEGELMVMPAATRVYATHDQKVTVRNMGDAPLFLSITLQKIMNPGVTPEKKVDLGQLDNPGMLASPDKLTLGPGQSRQIELKSLTDPAQEEVYRLYVVPIRSLKVEDAPADKITAPMSVAIGYGVLVRHLPPPGKLNVAWTHRCEDGGITLESTGNVRTLFSNASYDGVKQPQTIAVFPGTPQHFATKRMTLSVQDEPKTLQCP
>NZ_CP046608.1|WP_039369805.1|292805_294965_+|fimbrial-protein
MDDSARYVATFNGKTLPGFVRYSATESVLEFDAAKYAANGVSPDDVDTIRNVVSKIDYKRCSKGCDIEVDGYYVTIDKLRRSISIRNSREDYFAPETTFGLVNNQSVDFRASSNGYRAANLNGATWVGLPSRSFGYVSWYANRTQTRGTSYGSQGVSSYYLQKNFAGTYLRAGKQNSIDYASGSVSTLLSPSFDQFVTFGSQSNLQVNRDAGSLVLYATAEGNYEFYRNGRLIMKRPAALGRNEISFADLPGGYYPVQVRLVDRNGNLVSQEIREINNVNFGAGGGNAWHFTVGKEMSDRGGFLMEGAMSRNFRQFYMNASTLVGRGGDWAAEVNVTRPTKIGDVDVTPTLGVLAGERKAGGYVSLAASSEALGSLSASRYLNNDVSRFYAGTSSTSVTYSRMVRKATVGYNYQQSGFGATHQAEVRWNYRPNGLWATFALGVQKGSFSRTSGGYGVYFNMTMQLDKVQASFSAARSGGQTQLSGDYRKDFQDGFGTTTLGVTGNRINSDYGINVYGSRSGTRGDASLNLGYNGDASNVDFNYRGMVAASKDGVAFGRYSNGGSAMLLRTPKLDGMRYGFNVEGSPVGGGSTYAVPLNTYTDVAFARVYSNSDKLDMNIEVPANIVRAHPGQVYAAQAKVDINMVYSGFLKDTEGKPISGKVVETGDVVHRNGLFSIVSKTMLSQVTVDGDGHRYTCSLKDASGNDFRCELPGLKESKE
>NZ_CP046608.1|WP_039369777.1|292007_292556_+|hypothetical-protein
MKLSKLVLAMGVTTALFGMAHTAQADTVSKKVTLTAQINDGIFVSKPDGSTWYGTEELEANDYTQTKFSKTLPVRVYTKNPDFNISLASPLKLTNGNYEMKNAKVTLGSAAGDSEVKFGAVQKVTQTVSGNGGFDEVHNLKINVDAPTMVGTNSTNGSYSGDLVMVFEPLAAAGGGDTPASK
>NZ_CP046608.1|WP_039369774.1|288529_291532_+|hybrid-sensor-histidine-kinase/response-regulator
MPAKLKRLLAHAAAVGRKPFDPGRVRRQQQMLLYGGGCAITAFIVVCAALVVRLDVQDSLERARSTFLQREAEFYANLQTLDRMLAMLGNRTEELWRKGAPPPQDALRAFAADHGRLAASNAGGGTPFFAMAEVTPARPAESYARYLGAALGQVDRGARYPPVPMRAEPIGGYLIALDGPFLGVLGPGVVARARALPPDTDLRALIDRLMPNGAAKQKPDMQGATFMLDRRYDPVVGRTVIRFARRLDDDDGRPFGWLVLNGRFRLDDIMSPQSDDEDVAVLAADGRVVFGRPRDPALIARAMADAGAQSGKHVVVRRIGTRFAIVDSLSDTGLTMAATFSWRSVARATAVGVSVTLGAALFTVAMLWITIVTFDRRALRPAHRRAIRLIESEAFNRTLIHTAPAGLLLLAAADGETMVRNDAALAYEDGASGLPLGKRIWQACRERQRAGTGERRFVMQQELAVERAGHDTTYLAAHIVRTKFRGVAVLLCTLTDVTARRLTENKLREARVAADDANKAKSTFLATMSHEIRTPLNAIVGNLELMERAELPSVERQRLKTIVSSSDALLRVINDVLDLSKAESNQMALEQIPFDLRRVLQDVAAIFRPLAEAKGLTLECDVAAELADGHVGDPTRLRQLVSNLVGNAIKFTEYGGIAIDARRVRGGDGAGEVEIAVRDTGVGIPEDALPTLFDVYMQADASIYRRFGGTGLGLPLCRRIARLMHGELTVESQVGSGSTFVATLPLPAAPAGWRSAEPEPDTALAPQQRTDVQPLRVLVAEDHPASRALLRDQLDALGHDATIVENGVEAMRAYFEHPFDVVLTDLSMPQLDGFALANFLREQGASVPVIAMTAHATDDDRRRCAQVGVAEVVLKPLSIDVLDEALQRHGGQRGVRAEQAQSGAHEQAPAVTGEIRHALREATLRSLGAIEAALSAGNTNALVIELHSMRGGFALAGDSVARDACAQMEATVKSGGAAAFESHWDAFRSAIEHAMERIGQ
>NZ_CP046608.1|WP_082139546.1|308805_310515_-|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MRRARPLLRSDSIADRRSGRLRIACLTSLALSLHGIAHAQAQVPNAGQSLRDVETLRPTLPVPAAPDLAMPPSDEAPSSATAEGPRIPVSAFAIEGNAAIPAARLDALLVDLVGRELSFGDLQQAAARITAYYREHGYVLARAYLPHQDIEHGVVRIAVVEGRYGQLELHNRTRVLDRALRQPLASLQPGEIVSGNRLERSLMLLNEMPGVDAKGTLRPGAEPGTTDLVIDAERSRFATGSVEFDNFGDPLTGRYRATGSIDVNAPLRLGDRFSLRGLTSNTNQRYYRASYQVPVGPASTRVGIAYSDMNYRIGGSLKELRYHGGADVRSAFVTQPLLRSRRTSVDAQVTYENKHLRDVYGIFDVVGDKTVDLWSFGVSGNRQDGFGGGGRTGFSATVGIGHLSSNDPLDMNYYAHTLGQFAKLNINALRLQALGSRFQLYTQFSAQLSSRNLDSSEKFNLGGPYGVRAFALGAGSGDQGWQATAELRYLVAPGWQLSTFADTGRIQLSKQRWSRERNTVQLSSLGIGASWYGSRHQVSVTAALPVGYTDQVASPTRSPSVWLQAAQYF
>NZ_CP046608.1|WP_039371479.1|311128_312145_-|1-aminocyclopropane-1-carboxylate-deaminase
MNLQRFSRYPLTFGPTPIQPLKRLSAHLGGKVELYAKREDCNSGLAFGGNKTRKLEYLVPDALAQGADTLVSIGGVQSNQTRQVAAVAAHLGMKCVLVQEHWVNYEDPVYDRVGNIQLSRMMGADVRLVSDGFDIGIRRSWEEAMESVRQAGGKPYPIPAGCSEHPLGGLGFVGFAEEVRAQEAQLGFRFDYIVVCSVTGSTQAGMVVGFAADGRADRVIGIDASATPERTHEQITRIARHTAELVDLGRPITAADVVLDTRYAGPEYGLPNDGTLEAIRLCARLEGMLTDPVYEGKSMHGMIDKVRLGEFEPGSKVLYAHLGGVPALSAYSGIFREG
>NZ_CP046608.1|WP_039371476.1|312342_312843_+|Lrp/AsnC-family-transcriptional-regulator
MKLDRGRASPTDAAPALDRIDRAILRQLQQDASISNVSLAAKVKLSAPACLRRVERLKEMGLIRGIVALLDPKPLGAGMLVVIGFVLDRSTPEAFAAFEKAAQKVSGCVECHVVTGEFDYFMLVRTRDNDSFNRLHAEQLLYLPGVRQVRSFMVLKEILSTHALPL
>NZ_CP046608.1|WP_039371474.1|313087_314809_+|ubiquinone-dependent-pyruvate-dehydrogenase
MAKQTMAEYLAKTLAAAGVERIWGVTGDSLNGLSFSLGQIGSIRWMHTRHEESAAFAAGADAASTGRLAVCAGSCGPGNLHLINGLYDCHRNHQPVLAIAAHIPSTEIGLGYFQETHPQELFRECSHFAELVTNASQFPRVLARAMRTAIEERGVAVIVLPGDIALGDGPDELPAWSESAPPSILPADADLDRLAALLNASDAVTLLCGSGTQSAHDEVVALADTLGAPVVHALRGKQFVEWDNPFDVGMTGLIGFSSGYHAMESCDTLLMLGTDFPYRPFYPSNAKVAQIDWKGSQLGHRAPLALGLVGTVKETIAALLPRLTRKTQRRFLENALKHYAAARKGLDDLAVAEPPGRAIHPQYLTKIVDEVAAEDAIFTADVGTPTLWAARYLTMNGKRQLHGSFNHGSMANAMPQALGAQGAHPGRQVVSLSGDGGLSMLLGDLLTARQLKLPIKIVVYNNSLLGFVSMELKAAGYLDTNVDLSPTDFAAIAKGAGIFSVRVEHSENVEEALRMAFAHDGPAVVDVVTSKYELAMPPKIELAHAKGFSLFMLRAILSGRGDEIVELARTNLR
>NZ_CP046608.1|WP_039371471.1|314914_315355_+|GNAT-family-N-acetyltransferase
MAIEIRAYEASDLHTLSAIWFDASLLAHAFLGEARLREQRALIEAVYLPKAETWVACRAGEPVGFIGLLDDSIGGLFVAPAMHGHGIGRALVEHALALKGALDLEVYADNLDARAFYARLGFDEISRRDGDDEGLPFVNILMRSTR
>NZ_CP046608.1|WP_039371468.1|315696_316287_+|methyltransferase-domain-containing-protein
MMWPNAWRVSALFVREWVGRPAAVGALCPSSRQLAREMADAVPDGDGLVVELGGGTGAITAALLERGVAPRRLVVVERSPAFVQHLRRRFPGITIVSGDARQLERLLPPDAHVDAIVSCLPLRTLPRQDVAAIVDQCHRVLSADGVMIQFTYDLRPPGRHPLGDSAFVACGSRIVWANIPPARIVTVRSVTAEHAE
>NZ_CP046608.1|WP_039371485.1|316441_317875_+|sulfatase-like-hydrolase/transferase
MNRIKLAALLCAGAFALAGCGSDDGPTSTAPGPVQAAARNVIFFLGDGMGITTMTAARIYAVGEDGALTIDTLPETAFVKTYSNDAQVTDSAPSMSAYMTGVKTNNEVISMTPDTKAIEPTASLTGNCGANNGKSATTLLEIAKAKGLATGVVTTTRVTHATPAATYAHVCHRDAENDIAAQLVPGGAGYNGALGDGVDVVLGGGTQFFVPKDGGGKRTDGRNLVNELKAKGYAVAQNRDDLLAADATKGGKLVGLFSSSHMSYDLDRGATKEPSLTDMATRALDVLQKNPNGYFLMVEGGRIDHALHDTNAKRALQDTVAFDNAIKATIDKVRQTDPDLKNTLIVVTADHDHTLVLNGYAARTGKTEAGKPGVLGVLRSYQTGSVAKDADGAPYTIIGFGNGENRVQGSRAGTALTDAVTGADDYRQEAVVRMDKGSETHGGTDVFLGAIGRGADAFHGVIENNKVFELVRNAVQL
>NZ_CP046608.1|WP_039371465.1|317907_319299_+|sulfatase-like-hydrolase/transferase
MSTIKCIAAALAVAGFACGAAQAAGQAKNVIFFLGDGMGPTTVTASRIYKVGESGQLTMEKLARTARVKTFSNDAQTTDSAPSMAAYMTGVKMNNEVLSMSSDTRAVAPGNDANGNKTVNNCAPGNGQPVATLLELAKARGKAVGAITTTELTHATPAATYSHICHRDAQYDIAAQAAPGGAGYNAALGDGVDVLMGGGRNHWTPFDPVANKRGRADGRNLLNEMKAKGYTVVATRDQLAQAGNGKLVGLFSSTSHLEYELDRVAGKGEGPTQPSLAEMTSKAIDVLSKNSNGYFLMVEGGRIDHALHGTNAKRALEDTAAFDEAIRVALSKVDLSNTLIVVTADHDHTMTINGYSKRGNPILDISRNYRDGQPSKDADGNTYTTLVFGNGANRPNVRASVDSATATNDAYLQEVGVRMGSAGSETHGGGDVMLFADGADAKAFKGTIDNTKVFGLVRSAFGF
>NZ_CP046608.1|WP_039371462.1|319332_320073_+|hypothetical-protein
MKRQLLYALACGWVALPALAAADLDAVLVHESRTVSADGVTRTTMYRERMVRRDAHVWVERVLPVAAAGGHGNDHDHDHDHDAGARTGVQPAAAHAGHKHFNFQAAARHVTYDGKTARIEYVDTANRTVVSVPPAEYETTGFDGSWDNAYYVTPPSQLKRLAVAKRGDTPGTRWYEQAVDTPGARGVNRILWSEKLQAPLSVEFRSADGRVVRKLTLTPATAARHETLPWQTLAGYSRKEYADYLD
>NZ_CP046608.1|WP_039371458.1|320202_321342_-|acyltransferase
MSTGPRNARIDMLRGVSIVLVLLHHFNIPYSLRDTSLARVFGWDAVHAVARNGNYGVTMFFVISGYLITSNARRRWGSLGALDVRAFYVSRIARIVPCLLLLLALVNGLAAAGVPIFQNHAPEGIAVSFWLVNLASLTFWMNVLIGAYGWVNYALGVLWSLSVEEVFYLSFPLLCIALRRDARLVAFWVVIAAIGPVYRFTHAGDEGGFLYAYFASFDGIAIGCCTALLAERVTGQRLAAPLVQWLVAGAMATLYLAWPIAQSHVAGVTAMALGTAVLLIGAHVNGERVPGRLLAPLGRAGKLSYELYLFHLIVLGGLRTFWPPSATHGDTKLLLLIAYLALSAALSAAIARGYATPLDRFVKRIASRPSARVPDGARF

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Crispr_ID: NZ_CP046608_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046608_4

3029591-3029796

Orphan

Consensus_repeat	Method
GCGCCGCCGCCGAGGGCGCCGCCGAT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP046608_4

>merge|NZ_CP046608|4|3029591-3029796|CRISPRCasFinder
GCGCCGCCGCCGACAGCCGCACCCAGCAGGCCGCCCGTGCGGCCGCCCATCGCGTTGCCTGCCGCGGTACCTGCGCCGCCGCCGAGGGCGCCGCCGATGATCGCGCCGGTGCGCTCGTGACGGTTCGACGTCACCGCGCCACCCGCGCCGCCGCCGATGGCGCCGCCGATCACCGAGCCCGTGCTGCCGCCGAGCGCACCGCCGAC

>NZ_CP046608|4|4|3029591-3029796|CRISPRCasFinder
GCGCCGCCGCCGACAGCCGCACCCAG	CAGGCCGCCCGTGCGGCCGCCCATCGCGTTGCCTGCCGCGGTACCT
GCGCCGCCGCCGAGGGCGCCGCCGAT	GATCGCGCCGGTGCGCTCGTGACGGTTCGACGTC
ACCGCGCCACCCGCGCCGCCGCCGAT	GGCGCCGCCGATCACCGAGCCC
GTGCTGCCGCCGAGCGCACCGCCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046608.1\|WP_039349838.1\|3034421_3035921_-\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|273800
NZ_CP046608.1\|WP_039349877.1\|3027759_3028596_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|183011
NZ_CP046608.1\|WP_039349895.1\|3019439_3020354_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226928
NZ_CP046608.1\|WP_039349797.1\|3037357_3038665_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187579
NZ_CP046608.1\|WP_039349841.1\|3033725_3034349_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198289
NZ_CP046608.1\|WP_039349889.1\|3021477_3022299_+\|heme-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|184132
NZ_CP046608.1\|WP_039349886.1\|3022428_3023040_-\|trimeric-intracellular-cation-channel-family-protein	unknown	unknown	gnl\|CDD\|225415
NZ_CP046608.1\|WP_039349792.1\|3039447_3040650_+\|trans-2-enoyl-CoA-reductase-family-protein	unknown	unknown	gnl\|CDD\|237460
NZ_CP046608.1\|WP_039349861.1\|3031557_3031977_-\|HIT-family-protein	unknown	unknown	gnl\|CDD\|238608
NZ_CP046608.1\|WP_039349802.1\|3035917_3036790_-\|DUF393-domain-containing-protein	unknown	unknown	gnl\|CDD\|367833
NZ_CP046608.1\|WP_039349878.1\|3027207_3027582_+\|heavy-metal-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP046608.1\|WP_039349897.1\|3018351_3019443_+\|hemin-degrading-factor	unknown	unknown	gnl\|CDD\|226243
NZ_CP046608.1\|WP_039349799.1\|3036890_3037361_-\|DUF2269-domain-containing-protein	unknown	unknown	gnl\|CDD\|370783
NZ_CP046608.1\|WP_039349883.1\|3023048_3025169_-\|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl\|CDD\|273955
NZ_CP046608.1\|WP_039349879.1\|3026280_3027108_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP046608.1\|WP_039349880.1\|3025408_3026203_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|226100
NZ_CP046608.1\|WP_039349844.1\|3032232_3033633_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP046608.1\|WP_011353812.1\|3038753_3039287_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224427
NZ_CP046608.1\|WP_039349892.1\|3020369_3021458_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223682
NZ_CP046608.1\|WP_039349864.1\|3030300_3030960_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931

Protein	Function_ID	Function_description	E-value
NZ_CP046608.1\|WP_039349838.1\|3034421_3035921_-\|TIGR01777-family-protein	gnl\|CDD\|273800	TIGR01777, Hypothetical_UPF0105_protein_Rv2216/MT2273/Mb2239., TIGR01777 family protein. This model represents a clade of proteins of unknown function including the E. coli yfcH protein. [Hypothetical proteins, Conserved].	9.45197e-109
NZ_CP046608.1\|WP_039349877.1\|3027759_3028596_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|183011	PRK11171, PRK11171, (S)-ureidoglycine aminohydrolase.	0
NZ_CP046608.1\|WP_039349895.1\|3019439_3020354_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226928	COG4558, ChuT, ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism].	4.03864e-78
NZ_CP046608.1\|WP_039349797.1\|3037357_3038665_-\|SDR-family-oxidoreductase	gnl\|CDD\|187579	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.52177e-54
NZ_CP046608.1\|WP_039349841.1\|3033725_3034349_-\|glutathione-S-transferase	gnl\|CDD\|198289	cd03180, GST_C_2, C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.	8.51979e-48
NZ_CP046608.1\|WP_039349889.1\|3021477_3022299_+\|heme-ABC-transporter-ATP-binding-protein	gnl\|CDD\|184132	PRK13547, hmuV, heme ABC transporter ATP-binding protein.	2.60391e-168
NZ_CP046608.1\|WP_039349886.1\|3022428_3023040_-\|trimeric-intracellular-cation-channel-family-protein	gnl\|CDD\|225415	COG2860, COG2860, Predicted membrane protein [Function unknown].	1.65647e-63
NZ_CP046608.1\|WP_039349792.1\|3039447_3040650_+\|trans-2-enoyl-CoA-reductase-family-protein	gnl\|CDD\|237460	PRK13656, PRK13656, enoyl-[acyl-carrier-protein] reductase FabV.	0
NZ_CP046608.1\|WP_039349861.1\|3031557_3031977_-\|HIT-family-protein	gnl\|CDD\|238608	cd01277, HINT_subgroup, HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides. This subgroup includes members from all three forms of cellular life. Although the biochemical function has not been characterised for many of the members of this subgroup, the proteins from Yeast have been shown to be involved in secretion, peroxisome formation and gene expression.	2.11415e-47
NZ_CP046608.1\|WP_039349802.1\|3035917_3036790_-\|DUF393-domain-containing-protein	gnl\|CDD\|367833	pfam04134, DUF393, Protein of unknown function, DUF393. Members of this family have two highly conserved cysteine residues near their N-terminus. The function of these proteins is unknown.	5.13158e-19
NZ_CP046608.1\|WP_039349878.1\|3027207_3027582_+\|heavy-metal-responsive-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	6.478e-42
NZ_CP046608.1\|WP_039349897.1\|3018351_3019443_+\|hemin-degrading-factor	gnl\|CDD\|226243	COG3720, HemS, Putative heme degradation protein [Inorganic ion transport and metabolism].	4.23664e-140
NZ_CP046608.1\|WP_039349799.1\|3036890_3037361_-\|DUF2269-domain-containing-protein	gnl\|CDD\|370783	pfam10027, DUF2269, Predicted integral membrane protein (DUF2269). Members of this family of bacterial hypothetical integral membrane proteins have no known function.	1.82774e-57
NZ_CP046608.1\|WP_039349883.1\|3023048_3025169_-\|PBP1A-family-penicillin-binding-protein	gnl\|CDD\|273955	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP046608.1\|WP_039349879.1\|3026280_3027108_-\|SDR-family-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	4.46736e-104
NZ_CP046608.1\|WP_039349880.1\|3025408_3026203_+\|phosphotransferase	gnl\|CDD\|226100	COG3570, StrB, Streptomycin 6-kinase [Defense mechanisms].	1.12675e-81
NZ_CP046608.1\|WP_039349844.1\|3032232_3033633_+\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	7.64372e-40
NZ_CP046608.1\|WP_011353812.1\|3038753_3039287_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|224427	COG1510, COG1510, Predicted transcriptional regulators [Transcription].	6.42957e-41
NZ_CP046608.1\|WP_039349892.1\|3020369_3021458_+\|iron-ABC-transporter-permease	gnl\|CDD\|223682	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism].	7.01012e-78
NZ_CP046608.1\|WP_039349864.1\|3030300_3030960_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	6.19655e-26

>NZ_CP046608.1|WP_039349877.1|3027759_3028596_-|(S)-ureidoglycine-aminohydrolase
MSKTTYYAPHGGHPPQTDLLTDRAMFTEAYAVIPKGVMRDIVTSWLPFWTNTRLWVIARPLSGFAETFSQYIVEVNPGGGSDKPEQDKNAEAVLFVVEGEAELTLQGTKHVLKPGGYAFIPPGADWTLHNVSDAAVRFHWVRKHYQAVDGIPLPEAFVTNEQDVEPIPMPGTNGAWVTTRFVDMSDMRHDMHVNIVTFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDVNRHMNLLLNPAR
>NZ_CP046608.1|WP_039349878.1|3027207_3027582_+|heavy-metal-responsive-transcriptional-regulator
MRIGELCKRAGVSHDTVRYYERMGLLDKATRPHATNTYKHYSERSLQRIRLIIHAKALGFTLTEIGDVIHVWDSPTFGVAQKVACLQAKLTEIDEKSRALVMLRAGLLNALAKVGSDCVEGHIA
>NZ_CP046608.1|WP_039349879.1|3026280_3027108_-|SDR-family-oxidoreductase
MRDRFDFHGKTALVTGASSGIGRAFAYALAKRGARLLLVARSRDKLHDLAAELRRDYACDADFLTVDLSTADAVHTIDCHLKVTGKVVDVLVNNAGFAAYGRFETIPWTRQRDEVLVNCMAAIELTHLLLPGMQARSAGAVINVASTAAFQPDPYMAVYGATKAFLLSFSEAVWAENRHRGIRVVALCPGATQTAFFDVVGAQEAAVGTPMPVASVVEDALWALDRNRSHRIVGTRNRLLANLQRLLSRETSARLVEKILRPRGGQDPVTRETNA
>NZ_CP046608.1|WP_039349880.1|3025408_3026203_+|phosphotransferase
MFDRYLGLWGLVPDGGPLLTASGGLLPVVWQSRPAMLKVATCDEERRGNALMTWWNGQGAAQVWLHDGDAILLERAQPEPTLAGFSASGHDDDAMRIACDVVARLHAHRASEPPSVVALHAWFQALLSDASASVVLHRSATVARQLLAGPPVDEVVLHGDIHHGNILHFGDRGWRAIDPKGLRGDRAFDYANLFCNPSHDVAVDPVRFAQRVTLVASTAQLDRRRLLQWILAWSGLSAVWLIEDELLPDTRLQVATLAAAALGL
>NZ_CP046608.1|WP_039349883.1|3023048_3025169_-|PBP1A-family-penicillin-binding-protein
MTDHTAAPPPPPASPPRRRRVWRTLAGALLGLTVACAGIGAWTIQRIWTQLPSVEHLAVYRPALPLRIFSRDGDLLAEYGVERREFVPLERIPPLMRQALLAAEDAKFYQHGAVDFGGLARATFANVVTGQPGQGGSTITMQVARNFYLTRDKVLSRKLAEILMAAKLEREYSKDKLLELYMNEIYLGERTYGFAAAANVYFGKPLDALSAGEAAVLAGLPKAPSAFNPVVNPARATARRNYVLGRMHALGQLDDATYHAAVDAPIALATTPPPGIIAAPYVAERARRMMVERFHDDAYTLGLDVTTTISMRDQRAAESSLARTLSRQTRAKRDARNGLEGALVSLDAATGDMLALVGGADFNRNVFDHALQAYRQPGSSFKPFVYSAALEKGYFPGVLVDDTQRTLTHEETGARPWRPRNFANNYEGFIPVRRGLMRSKNLVAVSLMQATDARYVQQHAVHFGFDAQRNPASLPLALGAGAVTPLELASAYSVFANGGTRMEPRLILSVKQRHGGAMYEATAPAGERVVSARNAFVMDSMLRDVVKSGTARGALALRRDDAAGKTGTSNGSKDVWFAGYSSGIVAVAWLGYDTPRPMGRATGATLALPVWLDYMKTAVDGRTPVEATPPQDVALVDGDFVYAEYTRGTCTADVPSYIRSRFACGGAAAAGASDAPGNDGKPAESTPAAVDAAERERVLDLFRTDD
>NZ_CP046608.1|WP_039349886.1|3022428_3023040_-|trimeric-intracellular-cation-channel-family-protein
MHTLYLIAIVAEAMSGALMGMRRGMDRFGLALVGAVTALGGGTVRDVLLGHYPLGWIAHPEYLVITLVAATVASWVARHVARMKTLFVTVDAIGLAAFTIIGCDIGASTGSAPIIVVLAGAITGVCGGMLRDLLCNEMPLILREELYACVAFVTGGLYVGMQHLGVDAGIATVAALAAGFSMRMLAVRLGWKMRTFGAADLEH
>NZ_CP046608.1|WP_039349889.1|3021477_3022299_+|heme-ABC-transporter-ATP-binding-protein
MLTAHHLDVARRHHAILRDLSLSIVPGRVTALLGRNGAGKSTLLKTFAGELTGNVAPNGVRVTGDITLNGEPLARIDAPRLACLRAVLPQAAQPAFPFSVDEIVLLGRYPHARRSGATSHRDRDIAWCALERAGADGLVGRDVTTLSGGELARVQFARVLAQLWPDDEATESGPRYLLLDEPTAALDLSHQHRLLETVRAVAREWQLGVLAIVHDPNLAARHADTIALLADGTIVAHGTPRDVMTPSHIAQCYGFAVKMVETGDGAPPVMVPA
>NZ_CP046608.1|WP_039349892.1|3020369_3021458_+|iron-ABC-transporter-permease
MPAHASPFPASSSASRSGAARIGTSRRFAPFALAALACLVCAMSVVALCVGAYRIPLAEAWAALTGDAAAQQARAVLFDIRAPRVALALLVGGGFGATGAAMQALFRNPLADPGLVGVSSGAALGATTMIVLGPALFAAQVSAAALPAAAFAGALAVAALVYRLAASRGRLALPLLLLAGIAINALVGAAIGLLTFIADDAQLRSLTFWSLGSLGGAQWSALAAVAPCVAIGGALLARERDALNALQLGETEALHLGVPVQRLKRRVLVAVALAVGALVSCSGIIGFIGLVAPHCVRLVCGPDQRVVLPGAALFGALLTLAADLAARTVAAPAEVPLGVLTALLGAPFFLALLWKSRGALGG
>NZ_CP046608.1|WP_039349895.1|3019439_3020354_+|ABC-transporter-substrate-binding-protein
MSARPFDPRRRALLASAAAGALAGALPGSVLAQGAQATPKRVVVIGGALAETAFALGGAETPRYRLVGADTTCTYPDAAKRLPKVGYQRALSAEGLLSLRPDLVLASAEAGPPTAIAQVKNAGVAVTTFDERHDVESVRAKITGVAQALDVRDAGAALLQRFDRDWQAARDAVAARARGDAPPRVLFVLNHTGNQALVAGQRTAADAMIRYAGARNAMQGFDHYKPLTTEALAAAAPDVVLISDEGLAAVGGRAALLATPGFGATPAGRAQRVVSLDALFLLGFGPRLPLAVTTLHRRLSDALA
>NZ_CP046608.1|WP_039349897.1|3018351_3019443_+|hemin-degrading-factor
MMQSALPGQPATPARAAAALRDAFIKLKTERQLRNRDVAQALGVSEGEALAAFVGEHVVRLDARFPAMFEEMPRLGRVMALTRNDTAVHEKDGEYAQMSHDGPVGLALGDIDLRIFYRHWVSAFAVRDETAHGPLKSLQFFDAQGHAIHKVYLRAHSDHAAYDAFVERWRAPSQEPGLEVAPAAPKTPERADTEIDVAGFRAAWDAMTDTHQFFGITQRFGVSRMQALRLADPQYAYPVETAHALRHVLQHAAESGQPIMVFVGNAGMIQIHTGPVANVREVGAWINVLDPGFNLHVREDLIAAAWVVKKPTSDGIVTSLELFDRQGDHVALLFGERKPGQVERDDWRALVATLPAAARGGAR
>NZ_CP046608.1|WP_039349864.1|3030300_3030960_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MKVTSRAAVASCIATLVYLGLAVLGSGGFEAFFSHPQLTVVVVATLAMAVAALFTEGNLSSGERENRDNRWVLAAFGVSGFLLAYLPALTDRLDFWTFGGDAVRWIGVVLYIVGGVLRIWPVFVLGKRFSGLVAIQPGHTLVTDGIYSRIRNPSYLGLVVNSVGWAFTFRSGVGLLLVVLTMVPLVARIRSEEALLRAQFGAEYDAYCARTWRLLPGVY
>NZ_CP046608.1|WP_039349861.1|3031557_3031977_-|HIT-family-protein
MSYDNNNPFAKILRGELSCVKVAEDDATLAIMDLMPQADGHVLVIPKEPAAQIFELSGDAAAAGIRMTQRVAAAVRAALEPDGVFIGQFNGAAAGQTVPHVHFHVIPRWEGAELRMHAREIADAATLEALAQRIRARFV
>NZ_CP046608.1|WP_039349844.1|3032232_3033633_+|serine-hydrolase
MTIPFKKLILRGVALAVVVAVGYTGYMLSRLAPIATGYAAKALCSGVYVSGRPAASVIDVDIMAGVHPLLKLVHPSIDPDHHRATATFAGFAEREADFRPGLGCTLALGPSPGALPAALPPLPDPPSTQPAPVTPPAGIDAQKLQTALDRAFDEPDPARPRRTRAVVVMWRGQVIAERYAPGFTADTPLPGWSMTKTVTAALVGTLVAQHKLSPDASALLPEWRGSGDPRAAITLDALLRMTSGLQFNEDYDDPLSDVALMLYAQPDTARFASEKPLAATPGTRWSYSSGTSAILARVMREALGSSDGDYLALPRRALFAPLGMRSAVFEPDASGTLVSPSYMYASARDWARFGQLLLQDGVWDGQRLLPEGWVRYLTRTTPQSERQEYGAQLWVKVPEPFNDRDPHAVAMPADAFHAVGHEGQFVSVVPSRQLVVVRLGLSRPESAWNHEAFLARVLDAVPAPGA
>NZ_CP046608.1|WP_039349841.1|3033725_3034349_-|glutathione-S-transferase
MLHILGKIPSINVRKVLWLCTELNLPFEQEDWGAGFRTTNDPAYLALNPNGLVPVIKDDDFVLWESNTIIRYLANRYGGDALYPAEPQARARVDQWIDWQGADLNRSWVGAFLGLVRKSPDHQDPAGIAQSIAGWTKHMQVLNTQLEATGAYVAGNGFTLADIPIGLSVNRWFGTPFEHPDFPAVSRYVERLATREGFQKYAGSANP
>NZ_CP046608.1|WP_039349838.1|3034421_3035921_-|TIGR01777-family-protein
MNTLPAYDWALNLLIVQGAMGAFDTLYHHELTQDLPHSPRAQLELGIHAVRSVLYGLVFASIANVAFHGAWVAAIAAVVVVEVVLTLWDFVVEDQSRKLPATERVLHTLLAVNGGALFGMIAMQLAAWAHEPTALQALDLGWRGWVLSLFAVGVTVSGIRDGIAACRIARRAPVANPFAGQPPGNVLVTGGTGFIGETLVNHLLDAGHTVTLLARDPLRAAYTFHGRVRSVTSVGQLQPHERFDTVINLAGAPVLGARWSKRRRAVLLASRVGVTESLMRWVETAEVKPRTWIQASAIGYYGVRPADERLDESSSAGAGFMSELCRQWEQSARPLERHGVRSVVLRLGVVFGPGGALRPMLLPHYVGMGGRFGDGTQVMSWIHRDDVLRIIARAMANPGMHGVYNAVAPAPLTQREFVQVVSKVLRRPAWLHVPAAPLRIAMGEMAELLLDGQRVMPARLHQDGFMFRFPTAEHALRDLTNRPHADFPCMACRLPRGRV
>NZ_CP046608.1|WP_039349802.1|3035917_3036790_-|DUF393-domain-containing-protein
MRSSELVLYFDGRCPLCVAEIKRLGARDARHRLAFVDIAKPGFDPAPLGVDLPALNRELHARLPDGRMLTGVDSILAAQALTGRRTLVRLLRVPAVRGVLALLYRRFARNRHAVSRWLGYRTEAPCDAAACGSGSERAAEPTPDRPAGGAARRLVVTWMYVAATAHVLVGMAVPWVAGAPWLDAYHRVIELHFWAGAAPDAARAQQVWWMSLMGATVQCASVWMLALVHLGNRLRKREVWGWLLAGLLIWAPQDMLFSLQAHVSGHVAIDAAALVAMVPPLVWLWRRDAV
>NZ_CP046608.1|WP_039349799.1|3036890_3037361_-|DUF2269-domain-containing-protein
MNTYLVIKALHILSSVLLVGTGFGTAFYLFFANRTRSVPAIAAVSRLVVRADWWFTTPAVIFQPASGLWLAHTAGWPWDTPWLVASIVLYAIAGVCWLPVVWLQLELASMAKLAHANGNAALPERYWRYAKRWELLGYPAFFAMLTVYFLMVLKPM
>NZ_CP046608.1|WP_039349797.1|3037357_3038665_-|SDR-family-oxidoreductase
MDTVLPSTRPHGRTRAHSMTVLVCGANGFIGRALCAQLEAGGHRVLRGVRHATGLCDVEIDFAQDIDPDAWLARLEGVDVVINAVGILADQRGATLDAVHRAAPCALFTACCRAGVRRVIQISALGVERGNTRYFASKCAADRFLKTLPIDFRIVRPALVYGTDGASARFFRMLASLPVQVLPAGGHQRLRPVHVDDLAEVVARCVDAPAVGRAVIDVVGADEVEYREMLARYRAALGFPPAARIGLPGPLAGMAAALLGTLPGAIFTRDTWTMLRGGNTGDPAAATAMLGRPPRGIDGFIGAEAAALRRDALAMWRRPLLRGALAIVWIWTAIASAFIHPLHASLALLAPAHLTGLPALIALYAASALDFSFGIATVVAPSRRLWGAQAALIVAYSAVIAVTMPGLLAEPFGPVLKNVPILAILLILFSEEEQA
>NZ_CP046608.1|WP_011353812.1|3038753_3039287_-|MarR-family-transcriptional-regulator
MELTPIAERFILHWGEMGSRWGVNRTVSQIHALLYLAGRPIAADEIAETLNVARSNVSTSLKELQAWRLAKVVHVLGDRRDHFETSTDIWELFKLIVEGRRQREIEPTLTVLRDCLTNPEIANESRETEQRIRDTLQFVETLTTWSDEMLRLKPDTLMKALGIGAKISQTVRRKPSK
>NZ_CP046608.1|WP_039349792.1|3039447_3040650_+|trans-2-enoyl-CoA-reductase-family-protein
MIIKPRVRGFICVTTHPVGCEANVKEQIDYVTSHGPIANGPKKVLVIGASTGYGLAARISAAFGSGADTLGVFFERAGSETKPGTAGWYNSAAFEKFAAEKGRYARSINGDAFSDKVKQVTIDTIKQDLGKVDLVVYSLAAPRRTHPKTGETISSTLKPIGKTVTFRGLDTDKEVIRDVTLEPATQEEIDGTVAVMGGEDWQMWIDALDEAGVLADGAKTTAFTYLGEQITHDIYWNGSIGEAKKDLDKKVLSIRDKLAAHGGDARVSVLKAVVTQASSAIPMMPLYLSLLFKTMKENGTHEGCIEQVYGLFKDSLYGATPHVDAEGRLRADYKELDPQVQAKVVAQWNHVTNENLYELTDFTGYKTEFLRLFGFEIAGVDYDADVNPDVKIPGIIDTTV

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP046609.1	3383553-3383574	2	0.909

1. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to position: 3383553-3383574, mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
ggcgccgccgaacaccgcgccc	Protospacer
*********** ***** ****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	CP047036	Rhodobacter sphaeroides strain DSM 158 plasmid pDx, complete sequence	28933-28954	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP047042	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pDx, complete sequence	28906-28927	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP047900	Pseudarthrobacter sp. YJ56 plasmid unnamed2, complete sequence	72688-72709	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP051473	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence	36889-36910	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP051473	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence	146015-146036	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP030276	Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence	36896-36917	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP030276	Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence	146039-146060	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP015289	Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence	80206-80227	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP015289	Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence	124016-124037	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP022195	Yangia pacifica strain YSBP01 plasmid unnamed5, complete sequence	21990-22011	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	498979-499000	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP015212	Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence	36199-36220	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP015212	Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence	145343-145364	2	0.909
NZ_CP046608_4	4.3\|3029749\|22\|NZ_CP046608\|CRISPRCasFinder	3029749-3029770	22	NZ_CP025513	Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence	515843-515864	3	0.864
NZ_CP046608_4	4.2\|3029689\|34\|NZ_CP046608\|CRISPRCasFinder	3029689-3029722	34	NC_015383	Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence	252421-252454	9	0.735
NZ_CP046608_4	4.2\|3029689\|34\|NZ_CP046608\|CRISPRCasFinder	3029689-3029722	34	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	40845-40878	10	0.706

1. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to CP047036 (Rhodobacter sphaeroides strain DSM 158 plasmid pDx, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

2. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP047042 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pDx, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

3. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP047900 (Pseudarthrobacter sp. YJ56 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
ggcgccgccgatcgccgagccg	Protospacer
*************.*******

4. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP051473 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

5. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP051473 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

6. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP030276 (Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

7. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP030276 (Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

8. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP015289 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

9. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP015289 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

10. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP022195 (Yangia pacifica strain YSBP01 plasmid unnamed5, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
ggcgccgccgctcaccgagccg	Protospacer
********** **********

11. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
ggcgccgccgatcaccgtgccg	Protospacer
***************** ***

12. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP015212 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

13. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP015212 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence) position: , mismatch: 2, identity: 0.909

ggcgccgccgatcaccgagccc	CRISPR spacer
cgcgccgccgagcaccgagccc	Protospacer
 ********** **********

14. spacer 4.3|3029749|22|NZ_CP046608|CRISPRCasFinder matches to NZ_CP025513 (Neorhizobium sp. SOG26 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.864

ggcgccgccgatcaccgagccc	CRISPR spacer
ggcgccgccgatcaccgagttg	Protospacer
*******************..

15. spacer 4.2|3029689|34|NZ_CP046608|CRISPRCasFinder matches to NC_015383 (Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequence) position: , mismatch: 9, identity: 0.735

gatcgcgccggtgcgctcgtgacggttcgacgtc--	CRISPR spacer
agccgcgccagtgcgctcgtgacgatt--gcctcca	Protospacer
...******.**************.**  .* **

16. spacer 4.2|3029689|34|NZ_CP046608|CRISPRCasFinder matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 10, identity: 0.706

gatcgcgccggtgcgctcgtgacggttcgacgtc	CRISPR spacer
cgacggtacggtgcgctcgtggcggatcgacgcg	Protospacer
 . **   *************.*** ******.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046607

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP046609

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP046610

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

4. NZ_CP046608

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection