CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046400	Pseudodesulfovibrio sp. SRB007 chromosome, complete genome	3 crisprs	cas3,cas2,cas1,cas4,cas7,cas8c,cas5,DEDDh,csa3	0	16	2	0

1. NZ_CP046400

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046400_1

• CRISPR_ID: NZ_CP046400_1
• CRISPR_location: 541591-545801
• CRISPR_type: TypeI
• Repeat_type: I-C
• Spacer_info: 63 spacers
• Cas_protein_info: cas2,cas1,cas4,cas7,cas8c,cas5,cas3

Consensus repeat of NZ_CP046400_1

Consensus_repeat	Method
NGTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CRT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	PILER-CR
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CRISPRCasFinder

spacers of NZ_CP046400_1

>1.1|541623|33|NZ_CP046400|CRT
CTAGGTCCGACCTCTCTTGGCAGATGTGTCTGC
>1.2|541688|34|NZ_CP046400|CRT
TCGACAAACGGATTACGCGGGTTGAGGACAATAT
>1.3|541754|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGGTGGTGTTAGTGGCTGATCAGATTGTCAAACA
>1.4|541820|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACGGGTACACCTACGAGGTCCGCGCCCGTTCCGT
>1.5|541886|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ATTTTAAGGGGTACGTAGATCACTTTTACAACTT
>1.6|541952|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCGGAGATATACGGACGTTCCGCGCCTTTTTACCG
>1.7|542019|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TCGGTCACTACCGGCACCGCCGGGGGACGAGAAA
>1.8|542085|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AAGACGCGGAGCGGACATCGCGCCAACACGTTCAG
>1.9|542152|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACCTTTTCAAGAGCGACGTTTCGGAGGTCGAGCTT
>1.10|542219|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGGCGGGGTAAGCCAAAGGCGCGACGACGAGCTT
>1.11|542285|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGGGACGCGGGCAACCGGGGTCGCCTTTTTGCCCA
>1.12|542352|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACGCCGAAGCAGGCCGGGCCAGCGCACCGGATATC
>1.13|542419|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGGTCAGGGTGCGGATGATGTGCAGACGTTGAGC
>1.14|542485|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACCCCTGGCGCTGGCCGGTGACGATGTACTTCGA
>1.15|542551|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGGCGGTGGTTACTGGAGGTCTTGCCTATGCGGCT
>1.16|542618|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
>1.17|542685|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
>1.18|542752|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGGACACGGCAGGGGTAGCATAGGAAGGTCGAAT
>1.19|542818|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGGTGGTATGGTAAATGTGGACAGATCGCCTATG
>1.20|542884|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACGGGCCGAACGCGGGATGTTGTCGATTTCGACG
>1.21|542950|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGGTCGCCGTAATCGGCAGATCGGGCAGCGCAGAG
>1.22|543017|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CCTTGGACATGCGGAGCCCGTTCAGATCGATGAT
>1.23|543083|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CACACATGGCGGGTACTTCCGTCGCATCCATGAT
>1.24|543149|33|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCAAGTGCCGAGGCGGGCACATGAGGTTGAACC
>1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CCAGCTGCTTCTTGGTCTGCTGATCGGACGCAAG
>1.26|543280|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TCCGTGACTTCAAAGTCGGTCCCGTCGTTGAGCG
>1.27|543346|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ATTGACGTTCGGGAACTAGGCACAGGCAAGTCCAG
>1.28|543413|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TTAAGTAGTGTCACAACATGCAGATTCTGCGCAG
>1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
>1.30|543546|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TATTCAACCCAAAATCAACCCGACGTTGTAAATA
>1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
>1.32|543679|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TATTCAACCCAAAATCAACCCGACGTTGTAAATA
>1.33|543745|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCTCAAGGCTGTTGACGGGATAAAAAAGGGGAAGA
>1.34|543812|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TCCAGTAACTACAGCCGCCGCGTCAAATATGCCA
>1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGAAGCGACGACCATGTCCTGGTCGATCCACAGG
>1.36|543944|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCCCAGGAAGGCCGCGCCAGCCGCCAAACCGACGA
>1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCCGGATACCCCGGCGCTTCCCGCCGCCGCAGGA
>1.38|544077|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACAACCCCTTGCCGCCCTTGCTAGCCTCTTTCGGT
>1.39|544144|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AACGAAGCCAACAGCGTTAAATATAGAGTTCATC
>1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AATCCTGGGCCGGGGCGAGGGGCGGCACGCTCTCA
>1.41|544277|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AGCGGCGACAGAGGCCGAAACCGGCGCGTGGTAT
>1.42|544343|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CTGATAACTTTCCTCATCCGGCGAAAGGGTAGATG
>1.43|544410|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
>1.44|544476|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
>1.45|544542|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CGATGGTTAGGGCGTTCCCGCCTGGGTAGATATG
>1.46|544608|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGGAGAGATAGCGCGAGTGAGCGCAAAGGGCAGGT
>1.47|544675|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGGAGTCCGGGGCGGATAGAGACTCTGTCATAGTC
>1.48|544742|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CCAAAAAATACGGTAACTTGGACAAGGAAAAATG
>1.49|544808|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TTCGCGTGGCCTATTACGTCGCCTGCCTCGTCGAT
>1.50|544875|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AAGTTCGACTTCGGAAACGTCAGACTTAAAAAGGT
>1.51|544942|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CCAGCATATCCGGCTATGTCCGCGCCTTCTTGTG
>1.52|545008|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TTGCAGCGGCCATAACGCCCAGAATGATGTACTT
>1.53|545074|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ACGATGATTTTATCTCAACTATAATGGCAATGACC
>1.54|545141|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GCTTTACTCCCTTCCGGCGTCAGACATCCTGGAT
>1.55|545207|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TTCACCATTTCAGGCGCGCGCAGCACCTTCAACCT
>1.56|545274|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AAAAGTTGAAACAGCCGGACCTTTTGCGTCATAC
>1.57|545340|33|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
CCAGTAACTTTTGCTGCCTTTTTAAGTTCATAA
>1.58|545405|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TTGATCACATTTTAACCGCCCTAAAGGGCAAAGG
>1.59|545471|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
TGTGACGGCCACGGATGCCGGTGCCCTGATAGAT
>1.60|545537|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ATTGTTTTCGGCTCAAGTTCTGTGGTGGCAGAGG
>1.61|545603|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
ATGGTTTGGCAGCGACTGTTTGTCAACTTCTCAA
>1.62|545669|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
AAGGTGGTTCCCCGCGGCGGAGGGGATGGAGGAAA
>1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder
GGTGACCGTCAAGGACTCGTTGGAGACCAGCGGG

CRISPR arrays and Neighbor proteins around NZ_CP046400_1

CRISPR arrays

The CRISPR arrays of NZ_CP046400_1

>merge|NZ_CP046400|1|541591-545801|CRT,PILER-CR,CRISPRCasFinder
GCTAAATTATATGCCCTTGAGAAGGGGGCGACCTAGGTCCGACCTCTCTTGGCAGATGTGTCTGCCATTTCAATTCACGCCCCGTGCAGGGGGCGACTCGACAAACGGATTACGCGGGTTGAGGACAATATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGGTGGTGTTAGTGGCTGATCAGATTGTCAAACAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACGGGTACACCTACGAGGTCCGCGCCCGTTCCGTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACATTTTAAGGGGTACGTAGATCACTTTTACAACTTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCGGAGATATACGGACGTTCCGCGCCTTTTTACCGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTCGGTCACTACCGGCACCGCCGGGGGACGAGAAAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAAGACGCGGAGCGGACATCGCGCCAACACGTTCAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACCTTTTCAAGAGCGACGTTTCGGAGGTCGAGCTTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGGCGGGGTAAGCCAAAGGCGCGACGACGAGCTTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGGGACGCGGGCAACCGGGGTCGCCTTTTTGCCCAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACGCCGAAGCAGGCCGGGCCAGCGCACCGGATATCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGGTCAGGGTGCGGATGATGTGCAGACGTTGAGCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACCCCTGGCGCTGGCCGGTGACGATGTACTTCGAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGGCGGTGGTTACTGGAGGTCTTGCCTATGCGGCTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAGGGCAATTCGTGGCATAACTACGTGTTACACGGCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAGGGCAATTCGTGGCATAACTACGTGTTACACGGCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGGACACGGCAGGGGTAGCATAGGAAGGTCGAATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGGTGGTATGGTAAATGTGGACAGATCGCCTATGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACGGGCCGAACGCGGGATGTTGTCGATTTCGACGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGGTCGCCGTAATCGGCAGATCGGGCAGCGCAGAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCCTTGGACATGCGGAGCCCGTTCAGATCGATGATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCACACATGGCGGGTACTTCCGTCGCATCCATGATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCAAGTGCCGAGGCGGGCACATGAGGTTGAACCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCCAGCTGCTTCTTGGTCTGCTGATCGGACGCAAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTCCGTGACTTCAAAGTCGGTCCCGTCGTTGAGCGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACATTGACGTTCGGGAACTAGGCACAGGCAAGTCCAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTTAAGTAGTGTCACAACATGCAGATTCTGCGCAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTATTCAACCCAAAATCAACCCGACGTTGTAAATAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTATTCAACCCAAAATCAACCCGACGTTGTAAATAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCTCAAGGCTGTTGACGGGATAAAAAAGGGGAAGAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTCCAGTAACTACAGCCGCCGCGTCAAATATGCCAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGAAGCGACGACCATGTCCTGGTCGATCCACAGGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCCCAGGAAGGCCGCGCCAGCCGCCAAACCGACGAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCCGGATACCCCGGCGCTTCCCGCCGCCGCAGGAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACAACCCCTTGCCGCCCTTGCTAGCCTCTTTCGGTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAACGAAGCCAACAGCGTTAAATATAGAGTTCATCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAATCCTGGGCCGGGGCGAGGGGCGGCACGCTCTCAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAGCGGCGACAGAGGCCGAAACCGGCGCGTGGTATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCTGATAACTTTCCTCATCCGGCGAAAGGGTAGATGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGCCGGGGGCAACGCCTTCGCCGGACGTATAAAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGCCGGGGGCAACGCCTTCGCCGGACGTATAAAGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCGATGGTTAGGGCGTTCCCGCCTGGGTAGATATGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGGAGAGATAGCGCGAGTGAGCGCAAAGGGCAGGTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGGAGTCCGGGGCGGATAGAGACTCTGTCATAGTCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCCAAAAAATACGGTAACTTGGACAAGGAAAAATGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTTCGCGTGGCCTATTACGTCGCCTGCCTCGTCGATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAAGTTCGACTTCGGAAACGTCAGACTTAAAAAGGTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCCAGCATATCCGGCTATGTCCGCGCCTTCTTGTGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTTGCAGCGGCCATAACGCCCAGAATGATGTACTTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACACGATGATTTTATCTCAACTATAATGGCAATGACCGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGCTTTACTCCCTTCCGGCGTCAGACATCCTGGATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTTCACCATTTCAGGCGCGCGCAGCACCTTCAACCTGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAAAAGTTGAAACAGCCGGACCTTTTGCGTCATACGTTTCAATCCACGCCCCCGTGCAGGGGGCGACCCAGTAACTTTTGCTGCCTTTTTAAGTTCATAAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTTGATCACATTTTAACCGCCCTAAAGGGCAAAGGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACTGTGACGGCCACGGATGCCGGTGCCCTGATAGATGTTTCAATCCACGCCCCCGTGCAGGGGGCGACATTGTTTTCGGCTCAAGTTCTGTGGTGGCAGAGGGTTTCAATCCACGCCCCCGTGCAGGGGGCGACATGGTTTGGCAGCGACTGTTTGTCAACTTCTCAAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACAAGGTGGTTCCCCGCGGCGGAGGGGATGGAGGAAAGTTTCAATCCACGCCCCCGTGCAGGGGGCGACGGTGACCGTCAAGGACTCGTTGGAGACCAGCGGGGTTTCAATCCACGCCCCCGTGCAGGGGGCGAC

>NZ_CP046400|1|1|541591-545801|CRT
GCTAAATTATATGCCCTTGAGAAGGGGGCGAC	CTAGGTCCGACCTCTCTTGGCAGATGTGTCTGC
CATTTCAATTCACGCCCCGTGCAGGGGGCGAC	TCGACAAACGGATTACGCGGGTTGAGGACAATAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTGTTAGTGGCTGATCAGATTGTCAAACA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGTACACCTACGAGGTCCGCGCCCGTTCCGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTTTAAGGGGTACGTAGATCACTTTTACAACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCGGAGATATACGGACGTTCCGCGCCTTTTTACCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCGGTCACTACCGGCACCGCCGGGGGACGAGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGACGCGGAGCGGACATCGCGCCAACACGTTCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCTTTTCAAGAGCGACGTTTCGGAGGTCGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGCGGGGTAAGCCAAAGGCGCGACGACGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGGACGCGGGCAACCGGGGTCGCCTTTTTGCCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGCCGAAGCAGGCCGGGCCAGCGCACCGGATATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCAGGGTGCGGATGATGTGCAGACGTTGAGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCCCTGGCGCTGGCCGGTGACGATGTACTTCGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGCGGTGGTTACTGGAGGTCTTGCCTATGCGGCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGACACGGCAGGGGTAGCATAGGAAGGTCGAAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTATGGTAAATGTGGACAGATCGCCTATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGCCGAACGCGGGATGTTGTCGATTTCGACG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCGCCGTAATCGGCAGATCGGGCAGCGCAGAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCTTGGACATGCGGAGCCCGTTCAGATCGATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CACACATGGCGGGTACTTCCGTCGCATCCATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCAAGTGCCGAGGCGGGCACATGAGGTTGAACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCTGCTTCTTGGTCTGCTGATCGGACGCAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCGTGACTTCAAAGTCGGTCCCGTCGTTGAGCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGACGTTCGGGAACTAGGCACAGGCAAGTCCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTAAGTAGTGTCACAACATGCAGATTCTGCGCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTCAAGGCTGTTGACGGGATAAAAAAGGGGAAGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCAGTAACTACAGCCGCCGCGTCAAATATGCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGAAGCGACGACCATGTCCTGGTCGATCCACAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCCAGGAAGGCCGCGCCAGCCGCCAAACCGACGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCGGATACCCCGGCGCTTCCCGCCGCCGCAGGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACAACCCCTTGCCGCCCTTGCTAGCCTCTTTCGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AACGAAGCCAACAGCGTTAAATATAGAGTTCATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AATCCTGGGCCGGGGCGAGGGGCGGCACGCTCTCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGCGGCGACAGAGGCCGAAACCGGCGCGTGGTAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CTGATAACTTTCCTCATCCGGCGAAAGGGTAGATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGATGGTTAGGGCGTTCCCGCCTGGGTAGATATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGAGAGATAGCGCGAGTGAGCGCAAAGGGCAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGAGTCCGGGGCGGATAGAGACTCTGTCATAGTC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAAAAAATACGGTAACTTGGACAAGGAAAAATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCGCGTGGCCTATTACGTCGCCTGCCTCGTCGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGTTCGACTTCGGAAACGTCAGACTTAAAAAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCATATCCGGCTATGTCCGCGCCTTCTTGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGCAGCGGCCATAACGCCCAGAATGATGTACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGATGATTTTATCTCAACTATAATGGCAATGACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTTTACTCCCTTCCGGCGTCAGACATCCTGGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCACCATTTCAGGCGCGCGCAGCACCTTCAACCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAAAGTTGAAACAGCCGGACCTTTTGCGTCATAC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGTAACTTTTGCTGCCTTTTTAAGTTCATAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGATCACATTTTAACCGCCCTAAAGGGCAAAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGTGACGGCCACGGATGCCGGTGCCCTGATAGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGTTTTCGGCTCAAGTTCTGTGGTGGCAGAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATGGTTTGGCAGCGACTGTTTGTCAACTTCTCAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGGTGGTTCCCCGCGGCGGAGGGGATGGAGGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGTGACCGTCAAGGACTCGTTGGAGACCAGCGGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC

>NZ_CP046400|1|1|541722-545801|PILER-CR
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTGTTAGTGGCTGATCAGATTGTCAAACA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGTACACCTACGAGGTCCGCGCCCGTTCCGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTTTAAGGGGTACGTAGATCACTTTTACAACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCGGAGATATACGGACGTTCCGCGCCTTTTTACCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCGGTCACTACCGGCACCGCCGGGGGACGAGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGACGCGGAGCGGACATCGCGCCAACACGTTCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCTTTTCAAGAGCGACGTTTCGGAGGTCGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGCGGGGTAAGCCAAAGGCGCGACGACGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGGACGCGGGCAACCGGGGTCGCCTTTTTGCCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGCCGAAGCAGGCCGGGCCAGCGCACCGGATATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCAGGGTGCGGATGATGTGCAGACGTTGAGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCCCTGGCGCTGGCCGGTGACGATGTACTTCGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGCGGTGGTTACTGGAGGTCTTGCCTATGCGGCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGACACGGCAGGGGTAGCATAGGAAGGTCGAAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTATGGTAAATGTGGACAGATCGCCTATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGCCGAACGCGGGATGTTGTCGATTTCGACG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCGCCGTAATCGGCAGATCGGGCAGCGCAGAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCTTGGACATGCGGAGCCCGTTCAGATCGATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CACACATGGCGGGTACTTCCGTCGCATCCATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCAAGTGCCGAGGCGGGCACATGAGGTTGAACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCTGCTTCTTGGTCTGCTGATCGGACGCAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCGTGACTTCAAAGTCGGTCCCGTCGTTGAGCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGACGTTCGGGAACTAGGCACAGGCAAGTCCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTAAGTAGTGTCACAACATGCAGATTCTGCGCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTCAAGGCTGTTGACGGGATAAAAAAGGGGAAGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCAGTAACTACAGCCGCCGCGTCAAATATGCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGAAGCGACGACCATGTCCTGGTCGATCCACAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCCAGGAAGGCCGCGCCAGCCGCCAAACCGACGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCGGATACCCCGGCGCTTCCCGCCGCCGCAGGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACAACCCCTTGCCGCCCTTGCTAGCCTCTTTCGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AACGAAGCCAACAGCGTTAAATATAGAGTTCATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AATCCTGGGCCGGGGCGAGGGGCGGCACGCTCTCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGCGGCGACAGAGGCCGAAACCGGCGCGTGGTAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CTGATAACTTTCCTCATCCGGCGAAAGGGTAGATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGATGGTTAGGGCGTTCCCGCCTGGGTAGATATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGAGAGATAGCGCGAGTGAGCGCAAAGGGCAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGAGTCCGGGGCGGATAGAGACTCTGTCATAGTC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAAAAAATACGGTAACTTGGACAAGGAAAAATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCGCGTGGCCTATTACGTCGCCTGCCTCGTCGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGTTCGACTTCGGAAACGTCAGACTTAAAAAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCATATCCGGCTATGTCCGCGCCTTCTTGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGCAGCGGCCATAACGCCCAGAATGATGTACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGATGATTTTATCTCAACTATAATGGCAATGACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTTTACTCCCTTCCGGCGTCAGACATCCTGGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCACCATTTCAGGCGCGCGCAGCACCTTCAACCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAAAGTTGAAACAGCCGGACCTTTTGCGTCATAC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGTAACTTTTGCTGCCTTTTTAAGTTCATAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGATCACATTTTAACCGCCCTAAAGGGCAAAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGTGACGGCCACGGATGCCGGTGCCCTGATAGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGTTTTCGGCTCAAGTTCTGTGGTGGCAGAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATGGTTTGGCAGCGACTGTTTGTCAACTTCTCAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGGTGGTTCCCCGCGGCGGAGGGGATGGAGGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGTGACCGTCAAGGACTCGTTGGAGACCAGCGGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC

>NZ_CP046400|1|1|541722-545801|CRISPRCasFinder
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTGTTAGTGGCTGATCAGATTGTCAAACA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGTACACCTACGAGGTCCGCGCCCGTTCCGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTTTAAGGGGTACGTAGATCACTTTTACAACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCGGAGATATACGGACGTTCCGCGCCTTTTTACCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCGGTCACTACCGGCACCGCCGGGGGACGAGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGACGCGGAGCGGACATCGCGCCAACACGTTCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCTTTTCAAGAGCGACGTTTCGGAGGTCGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGCGGGGTAAGCCAAAGGCGCGACGACGAGCTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGGACGCGGGCAACCGGGGTCGCCTTTTTGCCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGCCGAAGCAGGCCGGGCCAGCGCACCGGATATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCAGGGTGCGGATGATGTGCAGACGTTGAGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACCCCTGGCGCTGGCCGGTGACGATGTACTTCGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGGCGGTGGTTACTGGAGGTCTTGCCTATGCGGCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGGGCAATTCGTGGCATAACTACGTGTTACACGGC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGACACGGCAGGGGTAGCATAGGAAGGTCGAAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGTGGTATGGTAAATGTGGACAGATCGCCTATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGGGCCGAACGCGGGATGTTGTCGATTTCGACG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGTCGCCGTAATCGGCAGATCGGGCAGCGCAGAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCTTGGACATGCGGAGCCCGTTCAGATCGATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CACACATGGCGGGTACTTCCGTCGCATCCATGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCAAGTGCCGAGGCGGGCACATGAGGTTGAACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCTGCTTCTTGGTCTGCTGATCGGACGCAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCGTGACTTCAAAGTCGGTCCCGTCGTTGAGCG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGACGTTCGGGAACTAGGCACAGGCAAGTCCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTAAGTAGTGTCACAACATGCAGATTCTGCGCAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGCGCACCGTGCCGTCGGTGTCGGCGATGAGGGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TATTCAACCCAAAATCAACCCGACGTTGTAAATA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTCAAGGCTGTTGACGGGATAAAAAAGGGGAAGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TCCAGTAACTACAGCCGCCGCGTCAAATATGCCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGAAGCGACGACCATGTCCTGGTCGATCCACAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCCAGGAAGGCCGCGCCAGCCGCCAAACCGACGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCCGGATACCCCGGCGCTTCCCGCCGCCGCAGGA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACAACCCCTTGCCGCCCTTGCTAGCCTCTTTCGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AACGAAGCCAACAGCGTTAAATATAGAGTTCATC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AATCCTGGGCCGGGGCGAGGGGCGGCACGCTCTCA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AGCGGCGACAGAGGCCGAAACCGGCGCGTGGTAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CTGATAACTTTCCTCATCCGGCGAAAGGGTAGATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGCCGGGGGCAACGCCTTCGCCGGACGTATAAAG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CGATGGTTAGGGCGTTCCCGCCTGGGTAGATATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGGAGAGATAGCGCGAGTGAGCGCAAAGGGCAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGGAGTCCGGGGCGGATAGAGACTCTGTCATAGTC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAAAAAATACGGTAACTTGGACAAGGAAAAATG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCGCGTGGCCTATTACGTCGCCTGCCTCGTCGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGTTCGACTTCGGAAACGTCAGACTTAAAAAGGT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGCATATCCGGCTATGTCCGCGCCTTCTTGTG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGCAGCGGCCATAACGCCCAGAATGATGTACTT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ACGATGATTTTATCTCAACTATAATGGCAATGACC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GCTTTACTCCCTTCCGGCGTCAGACATCCTGGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTCACCATTTCAGGCGCGCGCAGCACCTTCAACCT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAAAGTTGAAACAGCCGGACCTTTTGCGTCATAC
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	CCAGTAACTTTTGCTGCCTTTTTAAGTTCATAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TTGATCACATTTTAACCGCCCTAAAGGGCAAAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	TGTGACGGCCACGGATGCCGGTGCCCTGATAGAT
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATTGTTTTCGGCTCAAGTTCTGTGGTGGCAGAGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	ATGGTTTGGCAGCGACTGTTTGTCAACTTCTCAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	AAGGTGGTTCCCCGCGGCGGAGGGGATGGAGGAAA
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC	GGTGACCGTCAAGGACTCGTTGGAGACCAGCGGG
GTTTCAATCCACGCCCCCGTGCAGGGGGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046400.1|WP_158946237.1|528995_532940_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158946244.1|547303_547915_-|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl|CDD|273040
NZ_CP046400.1|WP_158946247.1|550505_551162_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl|CDD|187534
NZ_CP046400.1|WP_158946250.1|557855_558083_-|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl|CDD|283558
NZ_CP046400.1|WP_158946245.1|547917_548793_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl|CDD|377458
NZ_CP046400.1|WP_158946240.1|538606_539659_+|ion-transporter	unknown	unknown	gnl|CDD|369572
NZ_CP046400.1|WP_158946233.1|525695_526619_+|glycosyltransferase	unknown	unknown	gnl|CDD|133016
NZ_CP046400.1|WP_158946249.1|555097_557863_-|DUF927-domain-containing-protein	unknown	unknown	gnl|CDD|336282
NZ_CP046400.1|WP_158946242.1|545979_546273_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP046400.1|WP_158946238.1|532953_537219_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158946236.1|528095_528971_-|AIM24-family-protein	unknown	unknown	gnl|CDD|376704
NZ_CP046400.1|WP_158946232.1|524693_525614_+|glycosyltransferase	unknown	unknown	gnl|CDD|132997
NZ_CP046400.1|WP_158946235.1|527819_528044_-|hypothetical-protein	unknown	unknown	gnl|CDD|215079
NZ_CP046400.1|WP_158946239.1|537233_538319_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158946248.1|551472_553647_-|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|224124
NZ_CP046400.1|WP_158946251.1|558219_558885_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158946246.1|548796_550509_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl|CDD|378245
NZ_CP046400.1|WP_158946243.1|546275_547307_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl|CDD|188360
NZ_CP046400.1|WP_158946241.1|539868_541236_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158946234.1|526627_527755_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP046400.1|WP_158946244.1|547303_547915_-|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	6.3e-40	131.9	0.0
NZ_CP046400.1|WP_158946247.1|550505_551162_-|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	2.6e-84	276.8	0.0
NZ_CP046400.1|WP_158946245.1|547917_548793_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	1.3e-114	376.9	0.0
NZ_CP046400.1|WP_158946246.1|548796_550509_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	3.1e-168	555.4	0.0
NZ_CP046400.1|WP_158946243.1|546275_547307_-|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	3.1e-156	514.4	0.0
NZ_CP046400.1|WP_158946242.1|545979_546273_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.6e-28	93.5	0.1
NZ_CP046400.1|WP_158946248.1|551472_553647_-|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	1.9e-65	216.2	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046400.1|WP_158946244.1|547303_547915_-|CRISPR-associated-protein-Cas4	gnl|CDD|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	3.22354e-41
NZ_CP046400.1|WP_158946247.1|550505_551162_-|type-I-C-CRISPR-associated-protein-Cas5	gnl|CDD|187534	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	1.133e-107
NZ_CP046400.1|WP_158946245.1|547917_548793_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl|CDD|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	1.06525e-152
NZ_CP046400.1|WP_158946233.1|525695_526619_+|glycosyltransferase	gnl|CDD|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.77785e-21
NZ_CP046400.1|WP_158946240.1|538606_539659_+|ion-transporter	gnl|CDD|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	1.35429e-11
NZ_CP046400.1|WP_158946249.1|555097_557863_-|DUF927-domain-containing-protein	gnl|CDD|336282	pfam06048, DUF927, Domain of unknown function (DUF927). Family of bacterial proteins of unknown function. The C-terminal half of this family contains a P-loop motif. The N-terminal domain appears to have a unique fold, which contains three Helices and two strands. Structural analyses show that helicases containing this domain form a hexameric ring with a positively charged central pore threading a single DNA strand through suggestive of a replicative function for this helicase.	3.17369e-91
NZ_CP046400.1|WP_158946248.1|551472_553647_-|CRISPR-associated-helicase-Cas3'	gnl|CDD|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	7.45053e-61
NZ_CP046400.1|WP_158946250.1|557855_558083_-|AlpA-family-phage-regulatory-protein	gnl|CDD|283558	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA). This family consists of several short bacterial and phage proteins which are related to the E. coli protein AlpA. AlpA suppress two phenotypes of a delta lon protease mutant, overproduction of capsular polysaccharide and sensitivity to UV light. Several of the sequences in this family are thought to be DNA-binding proteins.	4.71837e-06
NZ_CP046400.1|WP_158946236.1|528095_528971_-|AIM24-family-protein	gnl|CDD|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	3.86079e-41
NZ_CP046400.1|WP_158946232.1|524693_525614_+|glycosyltransferase	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.34556e-26
NZ_CP046400.1|WP_158946246.1|548796_550509_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl|CDD|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP046400.1|WP_158946243.1|546275_547307_-|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl|CDD|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP046400.1|WP_158946242.1|545979_546273_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.16782e-31
NZ_CP046400.1|WP_158946235.1|527819_528044_-|hypothetical-protein	gnl|CDD|215079	PLN00151, PLN00151, potassium transporter; Provisional.	0.0070042

Protein sequences

>NZ_CP046400.1|WP_158946241.1|539868_541236_+|hypothetical-protein
MRYKQAVVVIHGIGEQRPLETLRGFVDAILPEPEDSSDRKYRSKPDQMAESFELRCLQAPGSRTRPITDFYEYYWAHHMRNSKLSGVVTWLCSLLIRPIGKVPKGLRPIYFVTYAGLLLAFAILLWGLIDQTGQSLPNRLISLYKTEQLYVSAGILIVQVLISRFMLGYVADAARYLTPSPDNIEERNKIRAEGIKLLRSLHDSGRYCRIIVVGHSLGSVIGYDILRHLWVEKRKPSPPKAIKQPVAKHFDDTVHPIQTATTPITRDEIETFQQEQHKLWREHRDAGIPWLVTDFITLGSPLAHSALLLAKTPAEFLERKQELEYPSCPPMPTEQTHYLEHYTDPHLSLRIPHHGALFASTRWTNLFFPYHSLILGDVIGGALADSLGQGIKDIPVQPSRAGFLRKTLYSHVCYWEPADSEPTEHTDMTSDSLEALRSTLRLESLRSKAPWPDPD
>NZ_CP046400.1|WP_158946240.1|538606_539659_+|ion-transporter
MRLRQSFIALVLAGYMATIFLIYFFESSAGNANIKTLFDAFWYSLVTLTTVGYGDYYPTTVMGKVVSSTMVFASLGVLGYFVGKLTEHFQALAERHKMGLDGTDFTKHVIIVGWNDFSEGVVTQLVNAGKKACVIVDEKSHIDIIRDHFKRDSVFATFSDFNCRDCLSRANAAQAASLMPCLGDDTRNLVFILNAKKVYPDLSFVVTLDNAELKETFESAGVHFTISRNEVASKIVASYIFEPSVARFNEDLLASATGDNDYDIQQYYITESCRYAHHTYGETFNDLREKHNVLCIALSHPIDDGRELVKLPPSTEVVQPGDYLVMMTSGKAVGRLKDIFGVNEGLYFDE
>NZ_CP046400.1|WP_158946239.1|537233_538319_-|hypothetical-protein
MTEFLRRFLALCLLLCGGALFLWPGDKVLVVRVADFQRSYADYQKWEGDKAFGLEVFKFSSTEGRRQEVSGQAWEKLAKRLENPDGDPDLAARRFGYFRNQFAFAGDEAPFNSLDGYPLSGYICIDEGRHWLFLQNDYPQEFTDLPYPYWRPYRWYGLALAMAGLLVYFLIPKRKWGPEDIRYPQGNSVIAPDLMGLMLTPVMGLLPLLVVWSNSPGTSVFSIDKGWIWLTGAMWLMAACGIALLIVGLRYSQLAYRIGEDGLHEFSWTGSRVFPWGSIDYFQSYESKTSSRLGTLLLFFGGSLSSAGLGMTMRHNNEVGIKLYRENGEVMKIMENSLARFGDIEAALKANGVKRKRKQKQ
>NZ_CP046400.1|WP_158946238.1|532953_537219_-|hypothetical-protein
MRGIGSIRSIIFFFFFLCAAVPGNALADDLDWGDFVIDLSDKWTAQPVDADSPDSRLFTTSQDGLSAFMQVDKERMPEMSEDEYYEWLARYEQRWKSAGFKNPKFFSSGPNTVLGVPNCPYAVGENRGLLVYNFLPYRDGRVRLVMGGVDASYGKETPPGFIVEALSGVRMKSDPVATAKKEPEGDGGLGGFVSGLFNDAEKTVDAVMSSDEVQSARSGAGELWDTTKRKTTEVMNSEEVQSAKQGAQDLWEKGKRKTAEMVGGSAAMPSEEEAEDGADLAENGAASQADAGAVSEPVQSPASETPVPMPSLQEVMAKVPPVKAAPFIDLNEITAAQWDGAVTAAMEGMRLIYGDMNAKDEAKFQETWGVLRQYPHQDVVDYLNKFNPLLAELLSLRTTVNTTAALLEQAMVHAYWAAEIDDPFQVAQYTSLGEQYRNLLVAQQKRMDAVIKKLVDLGDVPDGAALMLKNQQEYMNQLNYLRRLRAKRSDPEGEWIGYMHYPKGVPFLEGAKYEPIYFYVYATGEPKKYYGFMLDAGDYEEKEFDSIDILPMEEMGLAEHFKGDSFNFSYSDEGERFTITAKRYTDGDMPVYPQASPDVYLKALKISEAERERILNDDRKDGFESIAAVAVDSMTKSAVQDQLRHFRLRSAFHRACVEFEKDPDYKKGDVVQAANLFDNLVAGHEVERVPLPSKKKQPEAAVAVTTHTADGKVKLNMVDDKTPEERRKVDWEAIEERQANIAIWTKIMECTEKEMQETEDPARKADLMRTVLGQRADIQAEQDRIATLKTGTIVHTRSEWDNYAQAQFIQKIAEDQQRYDKITLSLRRAQKMADNLPPEKADEVRRILKIGYENPEVLGNGNTKQASKVLGMVYQVANEHWNKELAQANSDAYWANVGLKTAEYTKTAADYSLMVASLYGGPHVNTVYQGITGYIEGGPKESFLRLAGSYNKLTGVLVDGYRGMDQAVKQGGGYLEIMHYASWEIAKGMFMDMAMSGIAGRIHAGKTGDVPGGSTRTGEVGSAPKTAKAGDAPDVGMVKAKAKAKGVPDDGFNRAINDADMKQYRQEVADARVKVKSYKKKFQELERARQEGAAPEKIKKLETELEDRASAIHESAPAKMMMKTHERNPKNRKMTESFVDSMDRVHSKTQQRFEELMAGQGYTKEQMEAIRNADSGKTVNTDYDNARKVQYGPDGKPLPPMKNGKPVAEVVWMQDAQRAWNQAYRDTTGRSPEMSWETVTTSKHAEAYVDKNVIMKRSDAEIAQARAKALKEGKPLRETDKITGIVHNVEARGGILEANKAWAGQTADVNKFKADHLRGSPEFGKVQKYVEISRSTSKECNKRLMPLLDSKMPPKSDVKNYNAWLKHKYYWTKVNKILGDVGSGRMDPSEGDRKLRLLTGGKSSLEVTHDLRTFMEALIKM
>NZ_CP046400.1|WP_158946237.1|528995_532940_-|hypothetical-protein
MTRISALLLALCVVLSGAFPALADDLSIIGTWERDDGHSVSFREGDSGEIEGVVADPGPAAEFGFSAGEVSFRMHPTADPDVYQGEAKWRSMGGEPEWKPQTMTVSGDAMTGLGAWTRQGVGASLFSSASSLWGAAKAKAKDAMDSEEMQSMKQGAGELWDATKEKSAEVMASEEMQSAKKEAGEMWDAAREKSAEVMASDEVAAAKRTVADLYNRVMASLFGVDSVQPAGPEDGIPIPEIPCEPFNEVSEEGYGFNNVQEQYFARESVWIGFDGPGTPYAWYGLYPAGKAIKDEFVDFSGKLQGNRLGSHSHGMFSLSVPARPGCYELIMTDSTAKDANVLARISIKVVPDEDTPVPALFIPRAVFGPGEFIAAEVPEETVDASKAFVALVPAEAEHGLFGVVSRLHKGYVMVKDAKDGVLGFGAPREPGKYSLRLYSHWGNDGQELTSSDFEVREVQWGGKPLIALDSEAYESGRAFSVVYNAMPDWPAKAWIALVPADVPHGNSGVNDKHDIAYLNLRQTKTGTWKVVAPKQPGRYELRMLDGNGSSSKEVFVAGFEVVLPSGYADREPSMKIMSAEARAFGSMEVEYVSRKDWSSKSWIGFVRKGTPADGNAAYKAALARKSLMYADEGVFDFGLPADPGPYELRMYGGADANQVMITLPVEVLPALAEGQGDAEAEAEAQALLDSLPEYDEFEITDEQFEQFFHVPEIPVVDIEPGDGGEALGNCSQCGKTAQLREEFLDLLRQYYPDQAVYLHADVTDATPPMLRTVAHQVDSECIDREIEIMTKLDLTLGRDNQFAQALTNMAMTFATKWKLPIKSGEKINQAINMANDTYTHGGAAIAAMQKGDYTDVVLQSMTMVIKNLMTACGDAACFNSVRKTADEMLLKYVKKLPAGKKAEFLNRMRAAIGSDPFIRRLEEAPDAMNVGLNVDTGTAVVEGGSDYKRAIWTLTSSAMQMHPATATALAVGTAGYEGMVAMRDFIVDDTTRNLYAGYKEAFDGGKEGDAVWAGLSRGYAFPYHKVRELMIANPTNPMVRKALTEGHQIRSLATGGAALKAEQISDEEIESYLKMQFETWREKERKGSDFSRFAKEIKKDFETLDCPLALFNKLEEARKQKSTYQQGKEAFTNWMEGTCKDGKAFAAYARMRHDIETDMAKWSGGKGCSKVSPRYESKKLACVLLEKGPSAYRRGMSELAKKCDWKPKVESWAALHYSGKIAKLNAGEKKFVKFMEKIGRTDLLNCMCRNSKGIVSARFHPQLTKGESPSCDRGSGACIGGNFGCVRFNIKSSAMKACGVAQAIADYKKKNRKR
>NZ_CP046400.1|WP_158946236.1|528095_528971_-|AIM24-family-protein
MSLKGKFEITASKTAQDGTVFEILELQELKGYWNTFAAERLYFANKAGMKAKVVRIRLNNSKIRLEPGALYFMQGNLEMKTSSGGGMMKGLLRKTLTGETFFVNEISGTGDVYLEPTFGHYFLHEIGGLEGGVIVDKGYFFAGSGDLDISIAKQKKISAGFFGGKGFFQTKISGIGIAVVLSPVPLDEVEIMDLSGGKLSVDGTFAFMRSESVEFAVQKSSKSWFSTSVSGEGLLHTYSGSGRVWVAPTQSIYEMLTYVPAGMGGAGGRGGGGGGGDDDDGDYDYDDGDDD
>NZ_CP046400.1|WP_158946235.1|527819_528044_-|hypothetical-protein
MDNILGIVIIVAVLILFFKFGGKKKTIRIGGKKRRVKKGRRGGGGGGSRGAHQDYDDDLEDDGYDDDGGSDDDD
>NZ_CP046400.1|WP_158946234.1|526627_527755_-|hypothetical-protein
MKRVVLTLLMLVLFAAPASASSLEGIWDDVHPLLSKAVADLEARGNVPDSSWNPFKEDKESVDDDINDLLNECIEILGISDMAETKAAIAELQQDSLNCRKKVAELRTERLAAPQKVEKWELWKKDVTSIDEEIKELEGREKDNAKRVEALVGQLLEEMRKLGMQVDREQVETLVYSVTGDDDVQMVSVFNNVKTITTELQRLTSQAGEEIEMAKRYYGMHTLLLRILLNLYQQYEHKIDEVYLVRIDGIVEKQEALMDKTEDRISNEPEKFRKIYQSNLKAQRLTRDTALLYADYLKKNRARIVSAREKVADEYDVALNTYETVQGAHSLISLMKNANAMLERMSGLQTPELMVFQNLEMKNEFKKLSERLAEG
>NZ_CP046400.1|WP_158946233.1|525695_526619_+|glycosyltransferase
MKIDVLMATYNGEQTLAAVLDGYRKVMPPEQGWQLVIVDNASTDGTRSLIKSYENDLPITYLYEAKPGKNSALNTGIKSLQGDLVILTDDDAIPCPDLLVQYREVAESEVDVSIFSGKVMPDWRKEPPLWMVDSIPLTTAYSLNAGKHSEGSIPPTSVLGPNMAVRREIFERGFRFDESIGPCGSSYAMGSETEFCTRLHGHGYNCHFSERPCVSHIIRDYQVNGKWLLKRSFQNGRGAANRDLRNAPGEFRLLAGIPKHYIKHAAIRTGTVILSLFSFDKTKIFTSLWECSSALGRIYEALKLRGT
>NZ_CP046400.1|WP_158946232.1|524693_525614_+|glycosyltransferase
MDISVLVCTWNNCRLLRRTLDSILANDTTAGFEIVVVNNNSTDETASILQSYEGHKNVVTVLEPRQGVSYAKNAGLQHCNGRLIVLTDDDVVVPPHWLEEYWKAFSQDESAQRFWGGPIESEFETHDFDRELLNYAPGSVKGLDLGTQQKSIDRKNLFLGANWALSKEACLAMGGFNNNLGQNPSLTYPRIGEESELIERLMRAGYEGIYLPTIKILHFVPETKLTLKHICDRRRALGHYKAIHSGAAYPGRKVFGIPTWLYKKYVFHVAAKYLARPFSRKEYIRHAARLSHIVGEMHGLASKGQS
>NZ_CP046400.1|WP_158946242.1|545979_546273_-|CRISPR-associated-endonuclease-Cas2
MLVLVSYDVSFENPDGKRRLQKIAKICENYGQRVQYSVFECVVDPAQWAQLRHRLLDAYDEEVDSLRFYFLGKNWQRRVEQHGAGEAYDPETDVLIL
>NZ_CP046400.1|WP_158946243.1|546275_547307_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLYVTSQGTYLSKDGECVVIRAENGQKKRFPVHVLDGIVCFGNVLCSPFLLGHCGEKGLALSFMTERGRYLAGVRGPQSGNVLLRREQYRQADDPVASADIARSVIAGKVVNSRAVLRRCLRDHGDRVDAGMLERAVCTLDECARRLQTPVSLDEARGMEGQAAGAYFAVFGQMVLQDEEAFSFDGRNRRPPLDAVNCLLSFVYTLLAHDVRSALEAVGLDPQVGFLHRDRPGRPGLALDVMEEFRSFMADRLVLSLINRGEVRARGFVTKESGAVFMDDDTRKTVLTAWQKRKQDEAMHPFLRERIPLGLAFHVQAQLIARSIRGDLDGYPPYYWK
>NZ_CP046400.1|WP_158946244.1|547303_547915_-|CRISPR-associated-protein-Cas4
MDRTLPLSALQHYLYCPRQCALIHVEKVWAENRFTAEGRLLHLRADSGSAGRRGGVAEDRAVPIRSDRLGLYGVADVVEMRPGPDGREIPYPVEYKRGSPKVEDWDRAQLCAQAMCLEEMLGAVIRDGAIFYGKPRRRERVVFDTPLRSLVEQSCRDMHTMVETAQTPPATHGKRCRGCSLKGACMPKTGQDVERYLLKGLEP
>NZ_CP046400.1|WP_158946245.1|547917_548793_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MTAITNRYEFVYLFDVENGNPNGDPDAGNTPRIDPETGHGLVTDVCLKRKVRNFVEIAKGGEEGCNIYVAEKGVLSLTREPAYKTEEVKKLKKKEEQVAAARQWMCENFFDVRTFGAVMSTKENNCGQVRGPVQLTFAKSIDPIIPAEVSITRMAVETEKEAKAQDGDNRTMGRKHIVPYALYRAEGFVSAHLADGDKGTGFSDDDLELLWQALANMFDHDHSAARGKMSARGLIVFKHQDKLGNAPAHKLFDAVTVTRNGGDGPARAFGDYVVAVDEGAVPGGVDVDVKF
>NZ_CP046400.1|WP_158946246.1|548796_550509_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILHALNQYYKRLSDDPKANVPEFGFGKQGVHFCLQLDREGKMVGRPLDLRDEKGKPRRIEVPGPVGRSVGIKSNFAWDNTGYVLGADDKGKPERTAQTHQAFKAEAAAVLDGVDDAGARAFLAFLNGWEPELAETLPDWEEIIGQNIVFQLDGEPGFLHDRPAFREAWIRHQAVGESETGMCLVTGENAPIPPIHAKIKGVPGAQTSGASLVSFNFDAAVSYGKKQNHNAPVSERAAFAYTTALNHLLAPGSLRKVQVGDTTVVFWSDAPGEAEALFGSGMGGKKAEDDGLVKRLEGYLADIAKGRFPDALGSADTPFYVLGLSPNAARISVRFWHVGTVGGMAENLGRHYRALAMKRRFDSEPEYPSPWQLLRELAPQRDSKNISPLLGGQLIRAILQGQPYPQTLLASALGRIRADKDVTYLRTALIKAFLVRNSNQEIHMTLDTENRDIGYRLGRLFAVVERIQEEAVPGANATVRDRFFSSATATPGRSFPIILKNAQHGLAKIRKEKPGWAVTLEKKIQDIVTGIDAATGFPSSLTTEKQGMFILGYYQQRQDFFTKKDDKSED
>NZ_CP046400.1|WP_158946247.1|550505_551162_-|type-I-C-CRISPR-associated-protein-Cas5
MAGIQLRVWGDYACFTRPEMKVERVSYDVMTPSAARGILEAIYWKPAIRWGIDRIHVMKPIRFDNVRRNEVAGKVPVGGSGGVNAAMKGGNAPLRLYVEESRQQRAAMVLRDVEYVIEAHFDYTSAEDRNDGKHLDMFNRRAKKGQCFHRPYLGCREFAAHFEPVKGDIPVSELAGDAPRDLGWMLYDINYAADMTPFFFRPTLEKGIVDCRKGVVAA
>NZ_CP046400.1|WP_158946248.1|551472_553647_-|CRISPR-associated-helicase-Cas3'
MDDIYAHTKDGSGPESWQKLDEHLDKVAQMAATFASSFDAAEWGYLLGLLHDVGKYSINFQKRLTGEKQQHVDHKGMGARLLQDRASAFGRIGAYCVAGHHVGLPDYNGTDNGHSLEKTVRGAASFPEDRTNPLLGRDDPELPFPIHSPFQASFFTRMLFSTLVDADFLDTEAFMDGVRHSWRTPGPSLEVLTAALDAKLATFAASGRINELRAEILAACRAKASLAPGLFSLTVPTGGGKTLTSMAFALDHARLHGKRRVIYVIPYTSVIEQNARVFREIFPANSVVEHHSTFDASKVFDREDHARESAEARRHRLACENWDAPVVVTTSVQFFESLFSFKPSRCRKLHNLADSVIILDEAQMLPVDFMVPCLRALEELTENYGASVVLCTATQPALRKEDFACGLDGLGDDRELAPDPQRMHEAFKRTELVDLGELALAEVAEMVREREQVLCIVNTRKRAAELFELVRDEPGARHLSALMCPAHRSKRLEEIREMLAGGEPCRVISTQLIEAGVDVSFPEVVREMAGLDSITQAAGRCNREGELDGAAPVGVFTPVEGVARAFSGPAGHTGSVLRTPDVDPFSPEAIRHYFTLHYWLEKDRLDSKRILEHLNNDRGEWYFRKAGKAFRLIENTMVPVVIPYDERAEKLVRDLHYAEHPGGILRQLQQYTVQVYDGQFAALDQAGGIEWVADTYAVLCGMEFHDEMFGLTFPGEMRPEDFIG
>NZ_CP046400.1|WP_158946249.1|555097_557863_-|DUF927-domain-containing-protein
MSSPRQQKYFKVDFQAVNHAALNRFNELVELWCPGGRYEGNEYVPRNPTRDDKKPGSFKINKDTGQWFENATGEYGGDLISLYAYLNGVTQLEAAKALAEYLHIEFNTPRCNRKKMSSKKADWEPFLPIPEDAPGSDHRHPKFGLPSRVWLYLDCEGNPLSYVCRFDLPDGGKAILPHTFGHDGKGNRHWDWKGVPAPRSLYGLDILAQAEATVPVLIMEGEKAADAARDLVGDSMVAMTWPSGSNSVHLADWSPVKDRAVKIWPDADKPGFEAALKVAELAVIEQAASVSIVVPPANAPKGWDLADATDWDSKRTLELIENNQVDREGFKCLALERYGIDDKPQTSPSASPGFKLKEDGVYRTKIVSSGELVEEMVCSPLEVLALTRDKDNQSWGKLLQVTDPDGNDHKWAMSMEMTAMAGEPFRQHLASLGLRLAPGRYSKARLLEYIVQTDPEARALCVPRTGWHGDTFVLPDQTYGVHGEEQVILQRLCNDNPYKLSGSLKEWQDSVGTWCQGNSRLAFGVSVAFAAVMQHHAGAESGGFHFIGSSSIGKTTVLMAAASVCGGGGDAGYIRQWRATDNGIEAIAASCCDTLLCLDEMGQADSKVVAEGAYLLANGVGKLRATKVGSTASINAWRSCFLSTGETSLNDKLLEDQRLRAKAGHAVRIVDIPADAGCDLGAFEKIHGFGNGEEFARAISQAATSYYGTPLRAFLEKLMDNLDAHCKRHSQLRHTFYNTHCPIEADGQVKRACRRFAHVAASGELAAEIGILPWESAEASKAAMDCFHAWLNHRGGKGAAEKLEGLRQVRAFFEKYASSRFELIGSKNSESSEPQVIVESYNRAGFRNEDDEGNAEFWMFPEAFREVCQGFDHKMVCRMLAEQGILKTQTSGSFQMAKRLPGMGVKSLKKVYVITSKIFKE
>NZ_CP046400.1|WP_158946250.1|557855_558083_-|AlpA-family-phage-regulatory-protein
MSEKQKESLLRISDVLERIPVSKSTWWAGVKHGIYPAGLKLGARCTVWRESDIDDLIDGLKRIAMGEYSEGDANE
>NZ_CP046400.1|WP_158946251.1|558219_558885_-|hypothetical-protein
MEDNREKKGMAGCGKVSYYNVLVSEFEEQLTEILQKGGKPELVLNRRDADGQTLEQKVIRELQRWRRASTDDAKSLQNRDEKILEFEYLLLRIRGAVYTVNGLPIPGMDKFADMAEGADLPTIGVVNSIVEPASFEGVVFNTPEEMAPWLHEKYKHCSGRNLRAEVARELDDSFPCPEDRKNNPVISNYQMGRLVSHPDEVLSVEGFRSRGKSARKRAQKE

Crispr_ID: NZ_CP046400_3

• CRISPR_ID: NZ_CP046400_3
• CRISPR_location: 1555461-1555549
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP046400_3

Consensus_repeat	Method
GACGATCTCTTCGCCGATGACGA	CRISPRCasFinder

spacers of NZ_CP046400_3

>3.1|1555484|43|NZ_CP046400|CRISPRCasFinder
AGAGGAGGAAGAGGAACCGGGTGATGCCGGCGCTCCGGTTGAG

CRISPR arrays and Neighbor proteins around NZ_CP046400_3

CRISPR arrays

The CRISPR arrays of NZ_CP046400_3

>merge|NZ_CP046400|3|1555461-1555549|CRISPRCasFinder
GACGATCTCTTCGGCGATGACGAAGAGGAGGAAGAGGAACCGGGTGATGCCGGCGCTCCGGTTGAGGATGATCTTTTCGCGGAAGACGA

>NZ_CP046400|3|3|1555461-1555549|CRISPRCasFinder
GACGATCTCTTCGGCGATGACGA	AGAGGAGGAAGAGGAACCGGGTGATGCCGGCGCTCCGGTTGAG
GATGATCTTTTCGCGGAAGACGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase	unknown	unknown	gnl|CDD|236088
NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl|CDD|235617
NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl|CDD|235486
NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|172730
NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	unknown	unknown	gnl|CDD|99740
NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA	unknown	unknown	gnl|CDD|132934
NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase	unknown	unknown	gnl|CDD|181635
NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease	unknown	unknown	gnl|CDD|227122
NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein	unknown	unknown	gnl|CDD|378198
NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein	unknown	unknown	gnl|CDD|236090
NZ_CP046400.1|WP_158947093.1|1556779_1557196_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158947097.1|1560421_1560637_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|273497
NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C	unknown	unknown	gnl|CDD|349414
NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|225217
NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl|CDD|239264
NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1	unknown	unknown	gnl|CDD|235775

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase	gnl|CDD|236088	PRK07757, PRK07757, N-acetyltransferase.	4.41498e-73
NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A	gnl|CDD|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	1.77638e-50
NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.88685e-90
NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.16309e-56
NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.27535e-59
NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex	gnl|CDD|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	4.66426e-105
NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|172730	PRK14242, PRK14242, phosphate ABC transporter ATP-binding protein.	0
NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.19304e-163
NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA	gnl|CDD|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	2.60325e-81
NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase	gnl|CDD|181635	PRK09065, PRK09065, glutamine amidotransferase; Provisional.	3.593e-109
NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease	gnl|CDD|227122	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].	7.84963e-58
NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein	gnl|CDD|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	1.6773e-12
NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	6.89407e-07
NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase	gnl|CDD|273497	TIGR01203, Hypoxanthine-guanine_phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase. Alternate name: hypoxanthine-guanine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine. [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides].	3.40546e-64
NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C	gnl|CDD|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	6.8894e-16
NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease	gnl|CDD|225217	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones].	3.6305e-31
NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.10259e-25
NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1	gnl|CDD|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0

Protein sequences

>NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase
MAHKLTPFITAEQISQRVAELGSEITTSYGKGGSLVCICVLKGAFLFYSDLIRKIDLGIEVDFVRLASYGTATSRGDDIVFSKDLEISIEGKDVLVVEDIVDTGHSMDFLLHVLRGRKPKSLKICSLIDKHERREKKVAVDFAGFKLDDGFIVGYGLDYAERYRELDGIYELSTE
>NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase
MIRKARIEDVKAIHGLLMHREEHEGLVLPRSFSQLYSHLRDFFVVVDDDGKVIGCCALNIIWDNLAEIRSLVVDPVHRGKRLGRKLVEACLSEAVTLGIYKVYTLTEQTAFFAHLGFEPEDMDQLNQKVFTDCLNCPRFPDHCNEVAMIMNL
>NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein
MNYFKRLAALSALLLLLIACSGGAPEETEASSAPPESPAERFPAMDVAQLDNYLTANKGKPTMLIFWATWCPSCKQAIPEMEKLAQSHGDKVNVITVSVDERRELLTRYFQDKEQPLPVYWGGEDLVRKFGVEAIPTLVLFNKSGEPVFSRPGAFPYSMLTAMADKLNAE
>NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease
MVPNILSPKLTRRQFLKAGSMAALGVAMGGCAKNPVTGKSQFMLVSEEQEIAMDKQASPHQLSADYGPVQDGALNSYVAGVGKSLSDRSHRPNMPYSFQVVNANYINAYAFPGGTVACTRGILVDLDNEAELSALLGHEVGHVNARHTASRMSTQMVAGTLAGIGGAFVGARYGGEWGALAGGLGGIGVGALLASYSRDDERQADALGMEYMTRAGYNPDGMVGLMDMLNDQHQQEPSALEVMFSTHPMSSERLATARKRAYTEYMGSREYSFYRERYMDNTAELRAIEPAIKDLQEAEKLLRGKKYADAEGKCAEALKIAPDDYAGLLLMSKCQVVQGKYDEAQPYVARAKDVYPSEAQAMQLSGLLMVKSKHYEAAFENFDAYEKTLPGNPYTPFYKGYSQEGMGHTGQAAQEYIRFLKQVNSGDQAKYAYYRLVQWGYIKGAAEPVADPFAGLA
>NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase
MKPFLIIRTGGTFPDVASKLGDFENWVARAMGLEHGQWITVNVQGGEALPSPGEFAGCAVTGSHDMVTDEALPWIETTAAWLRDAVRDGLPVFGICFGHQLLARALGGEAGFHPSGPEIGTMDIRCSPEATDDPLFTDLPGTFPGHTTHYQCALRLPPGSTLLAASDHEPHQAFRTGKHAWGVQFHPEFGAEAMRTYITRQADAIEERGGQTTTLLSEVKETPESTSLMRRFVQYCLGELAQA
>NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA
MRTEATRNRFSQRHPLVFGVIMIILAVALFMGVTAFARYMGWTNGGLALGKDRIGVVHIEGMIMDSTEVVDWIRTLRRDDAIKGVLLRVNSPGGAIAPSQEIYSAVTALAAEKPVVASYGSVAASGGYYASVPSRIIVANPGSVTASIGVMAEFFTAGEALSRLGIKPEVLTTGKYKAAGTPMRDLTDAQREQLLGMMRDLHEQFVDDVAKARSMDRTDVAAIADGRAVTGRQALALGLVDMLGSRDQAIDKLKDLCGIDGTAVLVEGPVKEKTFMEEIMGAIHIDFTSATSLGGWTFSYK
>NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1
MEKTTESVEMPEMEMNFADALDEYLNSDFGDLDEGTIVSGEVVKVDKDYVLVDVNFKSEGQIPVSEFTEADGSIAVSVGEKVDVYVARKNEAEGTIYLSRDKAKRMQLFDKLEEVQEKDGEVIGRIIRRIKGGYTVDLGGVEAFLPGSHVDLRPVPDMDALVNQEFDFKILKINRRRSNVIVSRRVLLEEMRSEQRDKLLSTLEDGQVVTGKVKNITEYGVFIDLGGLDGLLHITDMSWKRIKHPKEMVNLGDDLELKILSFDRDAQKVSLGLKQLVPDPWENIAEKYPQGSRFTGTITNLADYGAFVELENGVEGLVHISEMSWTRKLRHPSQMVKVGEEVEVIVLGVDPDKKRISLGMKQISPNPWDVVAEKYPEGTVLEGAIKNITEFGVFIGIEEGIDGLIHVSDISWTKKIRHPSEVYKVGDPVQAKVLTVDKENEKFTLGVKQLTEDPWTQVPAKYPVGQMITGTVTNITDFGLFVEVEEGIEGLVHVSEISRKKIKSPSEMFKEGDSIEAKVIHVSADERRLGLSIKQTKEEPAGGRKSKSFGSTTSGDIAGSTLGDLLREKLEEAAGEIPVDEPEAPAEEE
>NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU
MEQRAHFSKKLEDLKVKVLRMAALSESAVHKAIKAYLENDADLAEEVVIGDDVINEMEDEIDNFSLELLALDQPMAVDLRTIVGAQRITVNLERLGDEAVNLAHRAIFLSTRPPLPHNPKMESLATISKTMLSDAFKAYVDDDVALAGQICRMDDKADDLNIAILRQLVSEMVSESRIVERGVHAIMGARHMERIADLATNVAESVVFIVEGTSMKHSCKG
>NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein
MTTTIKAASTNLDFYYGDFKALEDISIEFELNRVTALIGPSGCGKSTYIRCINRMNDLINGTRVEGRLTLDGEDIYAPGIDVVSLRRRIGMVFQKPNPFPKTIFENVAYGLRVNGISDKQFLEARVEESLRGAALWDEVKDRMHTSALGLSGGQQQRLCIARALAIEPEVLLMDEPASALDPIATQKIEDLIHELKKEFTIIIVTHSMQQAARVSDRTAFFYMGKLIEVGDTKTMFTNPANKQTEDYITGRFG
>NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein
MSDTRWQYIAPTVLAVLVFAAGLILPCAAQAGTGADETSGWVRMTVDPTVLPPVQPPLMPEENASGTASEADAPQAAVPNLPKEGGEGDLPPEPVPGEMPEPTAQPAPAPAPEPAPAASAEQPEPAVPVVSPEPATPETMGSGVVSSVKAAYAGNSLVLTVSCDRPTADTGYVNLDGPRRLVLDLVGKWTVKTRNVVRLPGGKVKYVVLGEHPDKLRLVVHFRTPPAGRLTPRFTPGTNRLVITIPLP
>NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein
MFFSKDGRWKNVVQVGGTASTMGLHIVSAIIVGLTFGYFLDDYFGTKPYLIMIFFVLGVLAGFKAVFEDFRKLQRRQEEQQHGSLKQEGKKSAGDDQSEA
>NZ_CP046400.1|WP_158947093.1|1556779_1557196_+|hypothetical-protein
MINQKLEPLLVKWGFQRTDTRIVVRNQIYVSLGTSLVIVLVTLFSRWSLAYAAGAVLALINFWTLARVVQTLVYEPKGGPFKLFVIFMVKMTLSGLALYWLIGVERVPHWGLISGIGTVPLNITVTGLMQLGNKKPRL
>NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A
MGFSGGLQHPLLYADMIKSVGHWGASMEHALGVESINHVIYMWIAMAILFSLGLIVRGRLQLVPGGLQNVMETIFGGLEDFVVSNLGEEGRQFMPLLGTIFIFILTMNLMGLIPGCDAATANINTPAAMAIIVFVFYQFVGIRKWGAGYIKHFMGPVGFLAPLMLILEPISHLARPLSLTLRLFGNIRGEEIVLVLMFMLAPIFGSLPMYFLFILAKTIQAFIFFMLTMLYLQGAIEHAH
>NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C
MKIAKILFTTLAMVLVASVAFASEGADPVMSAKAYATAIGMGIAAGLCGIGQGMGVKGACEGIARNPEAGGQLSTTLILGLAFIESLAIYALVVNLILLFVV
>NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex
MKSEHIPKATIGRLAVYIQVLENLLRDGTDVISSEKLARACSVNSSQIRKDLAYFGEFGVRGVGYYVQELITSIKQSLGIDRVWKCALIGVGNMGAALLRHHDFERRGFKIEAAFDCDPDKIGREFENLEIVCPTHLKEQAPEMGLEIGIITTPPDRAQRAANHLVDANIRGIINFAPARINVPPHVPVEYVDFFDHLYSIAFQITLGND
>NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator
MSAQKVLVVEDHRDTRELLKYNLASAGFDVAVAEDGQGGLNLAAAFKPDIVLLDLMMPGMDGLETCRQLKSDPSLSRIPVIMLTAKGEEVDKIVGLELGADDYVVKPFSPRELILRIKAVLRRSGAPEPDAPKQWERNGLRVDFEAHQLSVDDEEISLTATEFKLLTVLISGAGKVQTRDNLLDTVWDTHFEGYSRTVDTHVRRLRQKLGPYASFIETVRGVGYRFKA
>NZ_CP046400.1|WP_158947097.1|1560421_1560637_+|hypothetical-protein
MYYYGFDKKFPSGSKYWSIYDDQLIGMLFSKIVNKTMSLEQHDANTEELVDEMVHNLFDLCFYINKDFHDC
>NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase
MAFYLVERDFQHAAQRQAFQGFVLDFKDYWTTYGGWKAARRAETFDSFVRRNHRKHLPRVPREGQPLGDRWLNPPFRYVVMDGKGMVIMGAGIYEEGAIAPDEVRQRAVPIEIGGQAVAWADRVGMASLSPQDVRYLGAVGESLVKGAGIAIGLSIILGLVFGRGLSRSVSKLTSAIRKMQESREEEHHVDIPSDDELGELADAFNAMSSELAVAHRELRQLSVRDPLTALYNRRHFDEQAAQLCRQADRYGSPLSLMIGDLDHFKQINDEFSHKMGDKVLRIVASIMTETTRESDVVARFGGEEFVVLFPNTSCPQAAVSCEHIRKSIEAYPWHELDPRLAVTMSMGVSGESCDGVNGLLSAADSLLYQAKRDGRNRVACPSDHA
>NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase
MPVRTKDNFLVFGAPLIEQDEIDEVAASMRSGWLGTGPKVARFESDFAAYLGGGYAAACNSCTAALHLSLVALGLKPGDEVITTPLTFCASVNAIIHAGCTPVLADVDPVTMNIDPDRIREKITDRTRAILPVHFAGRACDMDPIMAIAREHGLKVVEDCAHAIETTYKGQHAGTFGDFGCFSFYVTKNVCTGEGGMVIAREEEDIRNVKVLGLHGMSADAWKRFSDDGYKHYQVIHAGFKYNMMDIQAAIGIHQLKRVEQCFVRRCEIWDRYQEAFRTLPVGQPAPEEPGTRHARHLYTLLIDPVPCGIDRDEFLMRMNRENIGCGVHYLAVPEHPYYQERFGWKLEDTPHAVAIGRQTISLPLSPKLTDEDVEDVITAVKTCLAD
>NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease
MNFLLLASALAPSAILLWLFLSSDEYPEPPHVVLTTFLLGFLLGPGLLVFFAYLEPFIGGLTSTNPYIYGAGAAFLMAAVPEEIGKFLILRCYAIPHREFDEPMDGIVYGVTASLGFATMENLIYVYQGGLQTALWRAVTSLPCHAMLGAIMGYHAGRAVFSTHTRRSSYFKALLIPIALHGLFDLAPLTFRAAGKLGTPISPWAGYALSLLFLAVVRQEVVLAAKATGTLRAWQRRGRGPRFVFEGAWRPFKKAGRAAVAPAQSLERNMERLGREVLGAGNRAASARVMAVIFTSACLVCLVALVWVAATGSPGLMELFILGGLSTLFGMHAVNYLVRTEEPGSAESPNTGGRPDGE

Crispr_ID: NZ_CP046400_2

• CRISPR_ID: NZ_CP046400_2
• CRISPR_location: 1555254-1555400
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP046400_2

Consensus_repeat	Method
GACGATCTCTTCGCCGATGACGA	CRISPRCasFinder

spacers of NZ_CP046400_2

>2.1|1555277|49|NZ_CP046400|CRISPRCasFinder
GGATGCCTCCGAGCCTGACGAATCTCCCGAAGCTCCCGAGTCCGAAGAC
>2.2|1555349|28|NZ_CP046400|CRISPRCasFinder
GGATGCCGGGAGCATGGCCGACGATGTG

CRISPR arrays and Neighbor proteins around NZ_CP046400_2

CRISPR arrays

The CRISPR arrays of NZ_CP046400_2

>merge|NZ_CP046400|2|1555254-1555400|CRISPRCasFinder
GACGATCTTTTCGACGAGGTGGAGGATGCCTCCGAGCCTGACGAATCTCCCGAAGCTCCCGAGTCCGAAGACGATTCTCTCTTCGAGGAGGAAGAGGATGCCGGGAGCATGGCCGACGATGTGGAGGCCCTGTTCGGCGACGACGAA

>NZ_CP046400|2|2|1555254-1555400|CRISPRCasFinder
GACGATCTTTTCGACGAGGTGGA	GGATGCCTCCGAGCCTGACGAATCTCCCGAAGCTCCCGAGTCCGAAGAC
GATTCTCTCTTCGAGGAGGAAGA	GGATGCCGGGAGCATGGCCGACGATGTG
GAGGCCCTGTTCGGCGACGACGAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase	unknown	unknown	gnl|CDD|236088
NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl|CDD|235617
NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl|CDD|235486
NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|172730
NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	unknown	unknown	gnl|CDD|99740
NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA	unknown	unknown	gnl|CDD|132934
NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase	unknown	unknown	gnl|CDD|181635
NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease	unknown	unknown	gnl|CDD|227122
NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein	unknown	unknown	gnl|CDD|378198
NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein	unknown	unknown	gnl|CDD|236090
NZ_CP046400.1|WP_158947093.1|1556779_1557196_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158947097.1|1560421_1560637_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|273497
NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C	unknown	unknown	gnl|CDD|349414
NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease	unknown	unknown	gnl|CDD|225217
NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl|CDD|239264
NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1	unknown	unknown	gnl|CDD|235775

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase	gnl|CDD|236088	PRK07757, PRK07757, N-acetyltransferase.	4.41498e-73
NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A	gnl|CDD|235617	PRK05815, PRK05815, F0F1 ATP synthase subunit A; Validated.	1.77638e-50
NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.88685e-90
NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	1.16309e-56
NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.27535e-59
NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex	gnl|CDD|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	4.66426e-105
NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|172730	PRK14242, PRK14242, phosphate ABC transporter ATP-binding protein.	0
NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase	gnl|CDD|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.19304e-163
NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA	gnl|CDD|132934	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. Interestingly, the single membrane spanning E. coli SppA carries out catalysis using a Ser-Lys dyad with the serine located in the conserved carboxy-terminal protease domain and the lysine in the non-conserved amino-terminal domain.	2.60325e-81
NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase	gnl|CDD|181635	PRK09065, PRK09065, glutamine amidotransferase; Provisional.	3.593e-109
NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease	gnl|CDD|227122	COG4783, COG4783, Putative Zn-dependent protease, contains TPR repeats [General function prediction only].	7.84963e-58
NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein	gnl|CDD|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	1.6773e-12
NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein	gnl|CDD|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	6.89407e-07
NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase	gnl|CDD|273497	TIGR01203, Hypoxanthine-guanine_phosphoribosyltransferase, hypoxanthine phosphoribosyltransferase. Alternate name: hypoxanthine-guanine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine. [Purines, pyrimidines, nucleosides, and nucleotides, Salvage of nucleosides and nucleotides].	3.40546e-64
NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C	gnl|CDD|349414	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c. Subunit c (also called subunit 9, or proteolipid) of the Fo complex of F-ATP synthase. The F-ATP synthase (also called FoF1-ATPase) consists of two structural domains: the F1 (factor one) complex containing the soluble catalytic core, and the Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F1 is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1, while Fo consists of the three subunits a, b, and c (1:2:10-14). An oligomeric ring of 10-14 c subunits (c-ring) make up the Fo rotor. The flux of protons though the ATPase channel (Fo) drives the rotation of the c-ring, which in turn is coupled to the rotation of the F1 complex gamma subunit rotor due to the permanent binding between the gamma and epsilon subunits of F1 and the c-ring of Fo. The F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts, or in the plasma membranes of bacteria. The F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis. This group also includes F-ATP synthase that has also been found in the archaea Methanosarcina acetivorans.	6.8894e-16
NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease	gnl|CDD|225217	COG2339, prsW, Membrane proteinase, regulator of anti-sigma factor [Posttranslational modification, protein turnover, chaperones].	3.6305e-31
NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein	gnl|CDD|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	5.10259e-25
NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1	gnl|CDD|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0

Protein sequences

>NZ_CP046400.1|WP_158947090.1|1554356_1554884_+|hypoxanthine-phosphoribosyltransferase
MAHKLTPFITAEQISQRVAELGSEITTSYGKGGSLVCICVLKGAFLFYSDLIRKIDLGIEVDFVRLASYGTATSRGDDIVFSKDLEISIEGKDVLVVEDIVDTGHSMDFLLHVLRGRKPKSLKICSLIDKHERREKKVAVDFAGFKLDDGFIVGYGLDYAERYRELDGIYELSTE
>NZ_CP046400.1|WP_158947089.1|1553878_1554337_+|N-acetyltransferase
MIRKARIEDVKAIHGLLMHREEHEGLVLPRSFSQLYSHLRDFFVVVDDDGKVIGCCALNIIWDNLAEIRSLVVDPVHRGKRLGRKLVEACLSEAVTLGIYKVYTLTEQTAFFAHLGFEPEDMDQLNQKVFTDCLNCPRFPDHCNEVAMIMNL
>NZ_CP046400.1|WP_158947088.1|1553362_1553875_+|thioredoxin-fold-domain-containing-protein
MNYFKRLAALSALLLLLIACSGGAPEETEASSAPPESPAERFPAMDVAQLDNYLTANKGKPTMLIFWATWCPSCKQAIPEMEKLAQSHGDKVNVITVSVDERRELLTRYFQDKEQPLPVYWGGEDLVRKFGVEAIPTLVLFNKSGEPVFSRPGAFPYSMLTAMADKLNAE
>NZ_CP046400.1|WP_158947087.1|1551876_1553250_+|M48-family-metalloprotease
MVPNILSPKLTRRQFLKAGSMAALGVAMGGCAKNPVTGKSQFMLVSEEQEIAMDKQASPHQLSADYGPVQDGALNSYVAGVGKSLSDRSHRPNMPYSFQVVNANYINAYAFPGGTVACTRGILVDLDNEAELSALLGHEVGHVNARHTASRMSTQMVAGTLAGIGGAFVGARYGGEWGALAGGLGGIGVGALLASYSRDDERQADALGMEYMTRAGYNPDGMVGLMDMLNDQHQQEPSALEVMFSTHPMSSERLATARKRAYTEYMGSREYSFYRERYMDNTAELRAIEPAIKDLQEAEKLLRGKKYADAEGKCAEALKIAPDDYAGLLLMSKCQVVQGKYDEAQPYVARAKDVYPSEAQAMQLSGLLMVKSKHYEAAFENFDAYEKTLPGNPYTPFYKGYSQEGMGHTGQAAQEYIRFLKQVNSGDQAKYAYYRLVQWGYIKGAAEPVADPFAGLA
>NZ_CP046400.1|WP_158947086.1|1551003_1551735_-|glutamine-amidotransferase
MKPFLIIRTGGTFPDVASKLGDFENWVARAMGLEHGQWITVNVQGGEALPSPGEFAGCAVTGSHDMVTDEALPWIETTAAWLRDAVRDGLPVFGICFGHQLLARALGGEAGFHPSGPEIGTMDIRCSPEATDDPLFTDLPGTFPGHTTHYQCALRLPPGSTLLAASDHEPHQAFRTGKHAWGVQFHPEFGAEAMRTYITRQADAIEERGGQTTTLLSEVKETPESTSLMRRFVQYCLGELAQA
>NZ_CP046400.1|WP_158947085.1|1549971_1550877_+|signal-peptide-peptidase-SppA
MRTEATRNRFSQRHPLVFGVIMIILAVALFMGVTAFARYMGWTNGGLALGKDRIGVVHIEGMIMDSTEVVDWIRTLRRDDAIKGVLLRVNSPGGAIAPSQEIYSAVTALAAEKPVVASYGSVAASGGYYASVPSRIIVANPGSVTASIGVMAEFFTAGEALSRLGIKPEVLTTGKYKAAGTPMRDLTDAQREQLLGMMRDLHEQFVDDVAKARSMDRTDVAAIADGRAVTGRQALALGLVDMLGSRDQAIDKLKDLCGIDGTAVLVEGPVKEKTFMEEIMGAIHIDFTSATSLGGWTFSYK
>NZ_CP046400.1|WP_158947084.1|1548192_1549962_+|30S-ribosomal-protein-S1
MEKTTESVEMPEMEMNFADALDEYLNSDFGDLDEGTIVSGEVVKVDKDYVLVDVNFKSEGQIPVSEFTEADGSIAVSVGEKVDVYVARKNEAEGTIYLSRDKAKRMQLFDKLEEVQEKDGEVIGRIIRRIKGGYTVDLGGVEAFLPGSHVDLRPVPDMDALVNQEFDFKILKINRRRSNVIVSRRVLLEEMRSEQRDKLLSTLEDGQVVTGKVKNITEYGVFIDLGGLDGLLHITDMSWKRIKHPKEMVNLGDDLELKILSFDRDAQKVSLGLKQLVPDPWENIAEKYPQGSRFTGTITNLADYGAFVELENGVEGLVHISEMSWTRKLRHPSQMVKVGEEVEVIVLGVDPDKKRISLGMKQISPNPWDVVAEKYPEGTVLEGAIKNITEFGVFIGIEEGIDGLIHVSDISWTKKIRHPSEVYKVGDPVQAKVLTVDKENEKFTLGVKQLTEDPWTQVPAKYPVGQMITGTVTNITDFGLFVEVEEGIEGLVHVSEISRKKIKSPSEMFKEGDSIEAKVIHVSADERRLGLSIKQTKEEPAGGRKSKSFGSTTSGDIAGSTLGDLLREKLEEAAGEIPVDEPEAPAEEE
>NZ_CP046400.1|WP_158947083.1|1547165_1547831_+|phosphate-signaling-complex-protein-PhoU
MEQRAHFSKKLEDLKVKVLRMAALSESAVHKAIKAYLENDADLAEEVVIGDDVINEMEDEIDNFSLELLALDQPMAVDLRTIVGAQRITVNLERLGDEAVNLAHRAIFLSTRPPLPHNPKMESLATISKTMLSDAFKAYVDDDVALAGQICRMDDKADDLNIAILRQLVSEMVSESRIVERGVHAIMGARHMERIADLATNVAESVVFIVEGTSMKHSCKG
>NZ_CP046400.1|WP_158947082.1|1546306_1547068_+|phosphate-ABC-transporter-ATP-binding-protein
MTTTIKAASTNLDFYYGDFKALEDISIEFELNRVTALIGPSGCGKSTYIRCINRMNDLINGTRVEGRLTLDGEDIYAPGIDVVSLRRRIGMVFQKPNPFPKTIFENVAYGLRVNGISDKQFLEARVEESLRGAALWDEVKDRMHTSALGLSGGQQQRLCIARALAIEPEVLLMDEPASALDPIATQKIEDLIHELKKEFTIIIVTHSMQQAARVSDRTAFFYMGKLIEVGDTKTMFTNPANKQTEDYITGRFG
>NZ_CP046400.1|WP_158947081.1|1545424_1546171_+|AMIN-domain-containing-protein
MSDTRWQYIAPTVLAVLVFAAGLILPCAAQAGTGADETSGWVRMTVDPTVLPPVQPPLMPEENASGTASEADAPQAAVPNLPKEGGEGDLPPEPVPGEMPEPTAQPAPAPAPEPAPAASAEQPEPAVPVVSPEPATPETMGSGVVSSVKAAYAGNSLVLTVSCDRPTADTGYVNLDGPRRLVLDLVGKWTVKTRNVVRLPGGKVKYVVLGEHPDKLRLVVHFRTPPAGRLTPRFTPGTNRLVITIPLP
>NZ_CP046400.1|WP_158947092.1|1556496_1556799_+|hypothetical-protein
MFFSKDGRWKNVVQVGGTASTMGLHIVSAIIVGLTFGYFLDDYFGTKPYLIMIFFVLGVLAGFKAVFEDFRKLQRRQEEQQHGSLKQEGKKSAGDDQSEA
>NZ_CP046400.1|WP_158947093.1|1556779_1557196_+|hypothetical-protein
MINQKLEPLLVKWGFQRTDTRIVVRNQIYVSLGTSLVIVLVTLFSRWSLAYAAGAVLALINFWTLARVVQTLVYEPKGGPFKLFVIFMVKMTLSGLALYWLIGVERVPHWGLISGIGTVPLNITVTGLMQLGNKKPRL
>NZ_CP046400.1|WP_158947094.1|1557208_1557931_+|F0F1-ATP-synthase-subunit-A
MGFSGGLQHPLLYADMIKSVGHWGASMEHALGVESINHVIYMWIAMAILFSLGLIVRGRLQLVPGGLQNVMETIFGGLEDFVVSNLGEEGRQFMPLLGTIFIFILTMNLMGLIPGCDAATANINTPAAMAIIVFVFYQFVGIRKWGAGYIKHFMGPVGFLAPLMLILEPISHLARPLSLTLRLFGNIRGEEIVLVLMFMLAPIFGSLPMYFLFILAKTIQAFIFFMLTMLYLQGAIEHAH
>NZ_CP046400.1|WP_014323136.1|1558010_1558319_+|ATP-synthase-F0-subunit-C
MKIAKILFTTLAMVLVASVAFASEGADPVMSAKAYATAIGMGIAAGLCGIGQGMGVKGACEGIARNPEAGGQLSTTLILGLAFIESLAIYALVVNLILLFVV
>NZ_CP046400.1|WP_158947095.1|1558436_1559069_+|redox-sensing-transcriptional-repressor-Rex
MKSEHIPKATIGRLAVYIQVLENLLRDGTDVISSEKLARACSVNSSQIRKDLAYFGEFGVRGVGYYVQELITSIKQSLGIDRVWKCALIGVGNMGAALLRHHDFERRGFKIEAAFDCDPDKIGREFENLEIVCPTHLKEQAPEMGLEIGIITTPPDRAQRAANHLVDANIRGIINFAPARINVPPHVPVEYVDFFDHLYSIAFQITLGND
>NZ_CP046400.1|WP_158947096.1|1559451_1560138_-|response-regulator
MSAQKVLVVEDHRDTRELLKYNLASAGFDVAVAEDGQGGLNLAAAFKPDIVLLDLMMPGMDGLETCRQLKSDPSLSRIPVIMLTAKGEEVDKIVGLELGADDYVVKPFSPRELILRIKAVLRRSGAPEPDAPKQWERNGLRVDFEAHQLSVDDEEISLTATEFKLLTVLISGAGKVQTRDNLLDTVWDTHFEGYSRTVDTHVRRLRQKLGPYASFIETVRGVGYRFKA
>NZ_CP046400.1|WP_158947097.1|1560421_1560637_+|hypothetical-protein
MYYYGFDKKFPSGSKYWSIYDDQLIGMLFSKIVNKTMSLEQHDANTEELVDEMVHNLFDLCFYINKDFHDC
>NZ_CP046400.1|WP_158947098.1|1560875_1562036_+|diguanylate-cyclase
MAFYLVERDFQHAAQRQAFQGFVLDFKDYWTTYGGWKAARRAETFDSFVRRNHRKHLPRVPREGQPLGDRWLNPPFRYVVMDGKGMVIMGAGIYEEGAIAPDEVRQRAVPIEIGGQAVAWADRVGMASLSPQDVRYLGAVGESLVKGAGIAIGLSIILGLVFGRGLSRSVSKLTSAIRKMQESREEEHHVDIPSDDELGELADAFNAMSSELAVAHRELRQLSVRDPLTALYNRRHFDEQAAQLCRQADRYGSPLSLMIGDLDHFKQINDEFSHKMGDKVLRIVASIMTETTRESDVVARFGGEEFVVLFPNTSCPQAAVSCEHIRKSIEAYPWHELDPRLAVTMSMGVSGESCDGVNGLLSAADSLLYQAKRDGRNRVACPSDHA
>NZ_CP046400.1|WP_158947099.1|1562041_1563205_-|UDP-4-amino-4,-6-dideoxy-N-acetyl-beta-L-altrosamine-transaminase
MPVRTKDNFLVFGAPLIEQDEIDEVAASMRSGWLGTGPKVARFESDFAAYLGGGYAAACNSCTAALHLSLVALGLKPGDEVITTPLTFCASVNAIIHAGCTPVLADVDPVTMNIDPDRIREKITDRTRAILPVHFAGRACDMDPIMAIAREHGLKVVEDCAHAIETTYKGQHAGTFGDFGCFSFYVTKNVCTGEGGMVIAREEEDIRNVKVLGLHGMSADAWKRFSDDGYKHYQVIHAGFKYNMMDIQAAIGIHQLKRVEQCFVRRCEIWDRYQEAFRTLPVGQPAPEEPGTRHARHLYTLLIDPVPCGIDRDEFLMRMNRENIGCGVHYLAVPEHPYYQERFGWKLEDTPHAVAIGRQTISLPLSPKLTDEDVEDVITAVKTCLAD
>NZ_CP046400.1|WP_158947100.1|1563335_1564412_+|PrsW-family-intramembrane-metalloprotease
MNFLLLASALAPSAILLWLFLSSDEYPEPPHVVLTTFLLGFLLGPGLLVFFAYLEPFIGGLTSTNPYIYGAGAAFLMAAVPEEIGKFLILRCYAIPHREFDEPMDGIVYGVTASLGFATMENLIYVYQGGLQTALWRAVTSLPCHAMLGAIMGYHAGRAVFSTHTRRSSYFKALLIPIALHGLFDLAPLTFRAAGKLGTPISPWAGYALSLLFLAVVRQEVVLAAKATGTLRAWQRRGRGPRFVFEGAWRPFKKAGRAAVAPAQSLERNMERLGREVLGAGNRAASARVMAVIFTSACLVCLVALVWVAATGSPGLMELFILGGLSTLFGMHAVNYLVRTEEPGSAESPNTGGRPDGE

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046400_2	2.2|1555349|28|NZ_CP046400|CRISPRCasFinder	1555349-1555376	28	NZ_CP044425	Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence	510273-510300	5	0.821
NZ_CP046400_1	1.3|541754|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	541754-541787	34	NZ_CP054047	Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence	72205-72238	7	0.794
NZ_CP046400_1	1.43|544410|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544410-544443	34	NZ_CP033024	Agrobacterium fabrum strain 1D132 plasmid pAt1D132a, complete sequence	12705-12738	7	0.794
NZ_CP046400_1	1.44|544476|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544476-544509	34	NZ_CP033024	Agrobacterium fabrum strain 1D132 plasmid pAt1D132a, complete sequence	12705-12738	7	0.794
NZ_CP046400_2	2.2|1555349|28|NZ_CP046400|CRISPRCasFinder	1555349-1555376	28	NC_012807	Methylorubrum extorquens AM1 plasmid p1META1, complete sequence	29480-29507	7	0.75
NZ_CP046400_2	2.2|1555349|28|NZ_CP046400|CRISPRCasFinder	1555349-1555376	28	NC_047861	Bordetella phage vB_BbrM_PHB04, complete genome	82825-82852	7	0.75
NZ_CP046400_1	1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543214-543247	34	NZ_CP011054	Halomonas sp. KO116 plasmid unnamed2, complete sequence	142710-142743	8	0.765
NZ_CP046400_1	1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543479-543513	35	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	251591-251625	8	0.771
NZ_CP046400_1	1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543479-543513	35	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	163702-163736	8	0.771
NZ_CP046400_1	1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543612-543646	35	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	251591-251625	8	0.771
NZ_CP046400_1	1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543612-543646	35	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	163702-163736	8	0.771
NZ_CP046400_1	1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544011-544044	34	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	521554-521587	8	0.765
NZ_CP046400_1	1.7|542019|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	542019-542052	34	MN369758	Gordonia phage NHagos, complete genome	28278-28311	9	0.735
NZ_CP046400_1	1.9|542152|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	542152-542186	35	MN010758	Gordonia phage Dardanus, complete genome	16112-16146	9	0.743
NZ_CP046400_1	1.12|542352|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	542352-542386	35	NZ_CP018064	Rhodococcus sp. 2G plasmid p1, complete sequence	299471-299505	9	0.743
NZ_CP046400_1	1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543214-543247	34	NZ_CP034329	Tabrizicola piscis strain K13M18 plasmid unnamed1, complete sequence	69369-69402	9	0.735
NZ_CP046400_1	1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543214-543247	34	NZ_CP045379	Sulfitobacter sp. THAF37 plasmid pTHAF37_g, complete sequence	10118-10151	9	0.735
NZ_CP046400_1	1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543479-543513	35	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	41996-42030	9	0.743
NZ_CP046400_1	1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543612-543646	35	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	41996-42030	9	0.743
NZ_CP046400_1	1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543878-543911	34	NC_023143	Phaeobacter gallaeciensis DSM 26640 plasmid pGal_G40, complete sequence	16372-16405	9	0.735
NZ_CP046400_1	1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543878-543911	34	NZ_CP010594	Phaeobacter gallaeciensis strain P11 plasmid pP11_f, complete sequence	16243-16276	9	0.735
NZ_CP046400_1	1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544011-544044	34	NC_016972	Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence	18823-18856	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP019585	Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence	1409165-1409198	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	305288-305321	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	613303-613336	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	349344-349377	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	1271138-1271171	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP019483	Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence	23123-23156	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP019486	Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence	1102267-1102300	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NC_019848	Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence	12082-12115	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	14170-14203	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	14204-14237	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	197702-197735	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	1396077-1396110	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	1095136-1095169	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	14204-14237	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP021794	Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence	637427-637460	9	0.735
NZ_CP046400_1	1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	545736-545769	34	NZ_CP026526	Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence	12837-12870	9	0.735
NZ_CP046400_1	1.12|542352|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	542352-542386	35	NZ_CP040721	Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence	253445-253479	10	0.714
NZ_CP046400_1	1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	543878-543911	34	NZ_CP048426	Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence	142704-142737	10	0.706
NZ_CP046400_1	1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544210-544244	35	NZ_CP014675	Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence	71698-71732	10	0.714
NZ_CP046400_1	1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544210-544244	35	NZ_CP014676	Kozakia baliensis strain DSM 14400 plasmid pKB14400_2, complete sequence	49462-49496	10	0.714
NZ_CP046400_1	1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544210-544244	35	NZ_CP044989	Deinococcus sp. AJ005 plasmid p380k, complete sequence	175421-175455	10	0.714
NZ_CP046400_1	1.4|541820|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	541820-541853	34	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	371484-371517	11	0.676
NZ_CP046400_1	1.11|542285|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	542285-542319	35	MN694777	Marine virus AFVG_250M80, complete genome	19188-19222	11	0.686
NZ_CP046400_1	1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544011-544044	34	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	262899-262932	11	0.676
NZ_CP046400_1	1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder	544011-544044	34	NZ_CP054615	Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence	67462-67495	11	0.676

1. spacer 2.2|1555349|28|NZ_CP046400|CRISPRCasFinder matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 5, identity: 0.821

ggatgccgggagcatggccgacgatgtg	CRISPR spacer
cgacgccgcgagcatggccgacgatatt	Protospacer
 **.**** ****************.* 

2. spacer 1.3|541754|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP054047 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.794

-gggtggtgttagtggctgatcagattgtcaaaca	CRISPR spacer
tggatgat-ttagtggatgagcagattgtcaaaat	Protospacer
 **.**.* ******* *** ************  

3. spacer 1.43|544410|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033024 (Agrobacterium fabrum strain 1D132 plasmid pAt1D132a, complete sequence) position: , mismatch: 7, identity: 0.794

cgccgggggcaacgccttcgccggacgtataaag	CRISPR spacer
catcaggggcaacaccttcgccggacggatccag	Protospacer
*..*.********.************* **  **

4. spacer 1.44|544476|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033024 (Agrobacterium fabrum strain 1D132 plasmid pAt1D132a, complete sequence) position: , mismatch: 7, identity: 0.794

cgccgggggcaacgccttcgccggacgtataaag	CRISPR spacer
catcaggggcaacaccttcgccggacggatccag	Protospacer
*..*.********.************* **  **

5. spacer 2.2|1555349|28|NZ_CP046400|CRISPRCasFinder matches to NC_012807 (Methylorubrum extorquens AM1 plasmid p1META1, complete sequence) position: , mismatch: 7, identity: 0.75

ggatgccgggagcatggccgacgatgtg	CRISPR spacer
ggatgccgagcgcatggccgacggccgt	Protospacer
********.* ************..   

6. spacer 2.2|1555349|28|NZ_CP046400|CRISPRCasFinder matches to NC_047861 (Bordetella phage vB_BbrM_PHB04, complete genome) position: , mismatch: 7, identity: 0.75

ggatgccgggagcatggccgacgatgtg	CRISPR spacer
tcatgccgggcgcatggccgacggccag	Protospacer
  ******** ************..  *

7. spacer 1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

ccagctgcttcttggtctgctgatcggacgcaag	CRISPR spacer
ccagcaggttcttggtctgctgataatgctcgag	Protospacer
***** * **************** . .* *.**

8. spacer 1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

tgcgcaccgtgccgtcggtgtcggcgatgagggtg	CRISPR spacer
cgatcaccgtgccggcggtttcggcgatgacgtcg	Protospacer
.*  ********** **** ********** * .*

9. spacer 1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 8, identity: 0.771

tgcgcaccgtgccgtcggtgtcggcgatgagggtg	CRISPR spacer
cgatcaccgtgccggcggtctcggcgatgacgtcg	Protospacer
.*  ********** **** ********** * .*

10. spacer 1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.771

tgcgcaccgtgccgtcggtgtcggcgatgagggtg	CRISPR spacer
cgatcaccgtgccggcggtttcggcgatgacgtcg	Protospacer
.*  ********** **** ********** * .*

11. spacer 1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 8, identity: 0.771

tgcgcaccgtgccgtcggtgtcggcgatgagggtg	CRISPR spacer
cgatcaccgtgccggcggtctcggcgatgacgtcg	Protospacer
.*  ********** **** ********** * .*

12. spacer 1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

gccggatac--cccggcgcttcccgccgccgcagga	CRISPR spacer
--cgaacgccgccctgcgcttcgcgccgccgcaggc	Protospacer
  **.*..*  *** ******* ************ 

13. spacer 1.7|542019|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to MN369758 (Gordonia phage NHagos, complete genome) position: , mismatch: 9, identity: 0.735

tcggtcactaccggcaccgccgggggacgagaaa	CRISPR spacer
ccggtgactaccggcaccgccggggtctcatcga	Protospacer
.**** *******************  . *  .*

14. spacer 1.9|542152|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to MN010758 (Gordonia phage Dardanus, complete genome) position: , mismatch: 9, identity: 0.743

accttttcaagagcgacgtttcggaggtcgagctt	CRISPR spacer
acgagtggaacagcgacctttcggaggtcgagccg	Protospacer
**   *  ** ****** ***************. 

15. spacer 1.12|542352|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018064 (Rhodococcus sp. 2G plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.743

acgccgaagcaggccgggccagcgcaccggatatc	CRISPR spacer
ccgccgaagcagcccgggccagcgcacccccagca	Protospacer
 *********** ***************    .. 

16. spacer 1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034329 (Tabrizicola piscis strain K13M18 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

ccagctgcttcttggtctgctgatcggacgcaag	CRISPR spacer
ggcgctgcttcttggtctgctgaccggtctttat	Protospacer
   ********************.*** * . * 

17. spacer 1.25|543214|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP045379 (Sulfitobacter sp. THAF37 plasmid pTHAF37_g, complete sequence) position: , mismatch: 9, identity: 0.735

ccagctgcttcttggtctgctgatcggacgcaag	CRISPR spacer
gcaggaagatcgtggtctcctgatcggacgcaat	Protospacer
 ***  .  ** ****** ************** 

18. spacer 1.29|543479|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 9, identity: 0.743

tgcgcaccgtgccgtcggtgtcggcgat-----gagggtg	CRISPR spacer
gccgcatcgtgccgtcggtgtcggcgatctttcgt-----	Protospacer
  ****.*********************     *      

19. spacer 1.31|543612|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 9, identity: 0.743

tgcgcaccgtgccgtcggtgtcggcgat-----gagggtg	CRISPR spacer
gccgcatcgtgccgtcggtgtcggcgatctttcgt-----	Protospacer
  ****.*********************     *      

20. spacer 1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_023143 (Phaeobacter gallaeciensis DSM 26640 plasmid pGal_G40, complete sequence) position: , mismatch: 9, identity: 0.735

cgaagcgacgaccatgtcctggtcgatccacagg	CRISPR spacer
gggaaccccgatcatgtcctggtcgatcgacaac	Protospacer
 *.*.*  ***.**************** ***. 

21. spacer 1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP010594 (Phaeobacter gallaeciensis strain P11 plasmid pP11_f, complete sequence) position: , mismatch: 9, identity: 0.735

cgaagcgacgaccatgtcctggtcgatccacagg	CRISPR spacer
gggaaccccgatcatgtcctggtcgatcgacaac	Protospacer
 *.*.*  ***.**************** ***. 

22. spacer 1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_016972 (Streptomyces hygroscopicus subsp. jinggangensis 5008 plasmid pSHJG2, complete sequence) position: , mismatch: 9, identity: 0.735

--gccggataccccggcgcttcccgccgccgcagga	CRISPR spacer
cgaccg--cgtccctgcggttcccgccgccgcaggc	Protospacer
  .***  ...*** *** **************** 

23. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019585 (Sinorhizobium meliloti strain CCMM B554 (FSM-MA) plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

24. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

25. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

26. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

27. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

28. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019483 (Sinorhizobium meliloti strain B401 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

29. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019486 (Sinorhizobium meliloti strain B399 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

30. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_019848 (Sinorhizobium meliloti GR4 plasmid pRmeGR4c, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

31. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

32. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

33. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

34. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

35. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

36. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

37. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

38. spacer 1.63|545736|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026526 (Sinorhizobium meliloti strain AK21 plasmid pSymA, complete sequence) position: , mismatch: 9, identity: 0.735

ggtgaccgtcaaggactcgttggagaccagcggg	CRISPR spacer
agccggcgtcaaggactcgatggagcccagcctg	Protospacer
.*. . ************* ***** *****  *

39. spacer 1.12|542352|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP040721 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

acgccgaagcaggccgggccagcgcaccggatatc	CRISPR spacer
ccgccgaagcagccctggccagcgcacccccagca	Protospacer
 *********** ** ************    .. 

40. spacer 1.35|543878|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048426 (Rhizobium daejeonense strain KACC 13094 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

cgaagcgacgaccatgtcctggtcgatccacagg	CRISPR spacer
aagggcgacgaccatgttctgttcgatcacctcg	Protospacer
 ...*************.*** ******  *  *

41. spacer 1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014675 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_1, complete sequence) position: , mismatch: 10, identity: 0.714

aatcctgggccggggcgaggggcggcacgctctca	CRISPR spacer
gcgcttggggcggggcgatgggcggcacgcaatgc	Protospacer
.  *.**** ******** ***********  *  

42. spacer 1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014676 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_2, complete sequence) position: , mismatch: 10, identity: 0.714

aatcctgggccggggcgaggggcggcacgctctca	CRISPR spacer
gcgcttggggcggggcgatgggcggcacgcagtgc	Protospacer
.  *.**** ******** ***********  *  

43. spacer 1.40|544210|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP044989 (Deinococcus sp. AJ005 plasmid p380k, complete sequence) position: , mismatch: 10, identity: 0.714

aatcctgggccggggcgaggggcggcacgctctca	CRISPR spacer
aggaccgggccggggcgcggggcgtcacgctgcac	Protospacer
*.  *.*********** ****** ****** .  

44. spacer 1.4|541820|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.676

acgggtacacctacgaggtccgcgcccgttccgt	CRISPR spacer
ggacgtacacctacgacgtccgcggccgccagat	Protospacer
. . ************ ******* ***..  .*

45. spacer 1.11|542285|35|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to MN694777 (Marine virus AFVG_250M80, complete genome) position: , mismatch: 11, identity: 0.686

cgggacgcgggcaaccggggtcgcctttttgccca	CRISPR spacer
ggggtcgcgggcaaacggggtcgcctcctcatagg	Protospacer
 *** ********* ***********..*...  .

46. spacer 1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 11, identity: 0.676

gccggataccccggcgcttcccgccgccgcagga	CRISPR spacer
cgctcccaccgcgccgcttcccgccgccgcaccc	Protospacer
  *   .*** ** *****************   

47. spacer 1.37|544011|34|NZ_CP046400|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP054615 (Azospirillum oryzae strain KACC 14407 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

gccggataccccggcgcttcccgccgccgcagga	CRISPR spacer
cgacgacaccccggcgcttgccgccgccatcgcc	Protospacer
    **.************ ********.. *  

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1147367 : 1155732	8	Methanothermobacter_phage(16.67%)	NA	NA
DBSCAN-SWA_2	3033535 : 3041469	7	Abalone_shriveling_syndrome-associated_virus(16.67%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP046400|1147367:1155732|DBSCAN-SWA
TATGCAGGCGCACTACGGCTTTGCCGGATTCATGGGGAAGCGCGTCCACCTGGGCGTGTGTGGTTCCATAGCCGCTTACCGTGCGTTGGACCTTGTCCGTGCCTTTTTGGACGCGGATTGCATGGTCTCCGCCACCGTGACAGATGCGGCCGCGAGGTTCGTCACGCCCTTGTCCTTCGAGGGACTGGGCGCTTCGCCGGTCTATACGGGCATGTTTGACGCCGCAACCGAACGGGAGAGCGCCTTCGGGCATCTGGAGCCCGGCCAGACCTGCGAGGTCATGGTCATTGCTCCGGCTTCGGCCAACACCATAGCTAAACTTGCTAACGGGCTGGCGGACGACATGCTCTCCTGTCAGGCTTTGGCCTTTGCCGGACCCAAGGTTGTGGCACCGGCCATGAACCCGCGCATGTGGGCAAACCCCGTCACCAGGCGCAATTGGGACATGCTCGAAAAACTCGGGTTTATCGGGGTGGTTCCCGAGACGGGAAAGGTTGCCTGCGGCGACACCGGAACTGGCCGACTTGCTCCTGTTGAAGAGATTTTTCTTGCCGGTCTCAAAGCGCTTTCGCCTCAAGATTTGAACGGCAAGCGGGTAATGGTCACCCTTGGACCTACCAGGGAGCCATGGGATGCGGTCCGCTTCTGGTCCAATCCTTCATCAGGAACCATGGGCGCGTGCATGGCCATGGCCGCCTATCTTCGCGGAGCCGAGGTCACCGTGGTGGCCGGACCCACAGCCTTGAGTTTTCCTTCCGGGATGTCCGTGGTGCAGGTCCAGACCGCCCAGCAGATGAATGCGGCATGCCAGGATCTCTGGCCCTCCATGGATGTGGCTTGCGCCACCGCTGCTGTGGCCGACTTCCGTCCGGTTCTCTATGGCCCGGACAAGTTCAAGAAGGAGCAGGGCGACGGCCTGCACGTCGATTTTGTCCCCAACCCGGACATCCTCAAGGGATTGGGCGTTTCCAAGCAGGGATACCAGCGTCTCATCGGTTTTGCCGCTGAAACGCGGAACATCAAATCCGAGGCGTCCCGCAAGCTCAAGAGCAAGAATCTCGACCTCATTGCTGCAAACGATGTTTCGAGAGAAGGCAGCGGCTTTGGCACTGCCACGAATCAGATGTATATACTGGACAAGGCAGGCCGCCAGGAGTCGTGGCCTAAACTGCCAAAGACCGAAGTAGCATGGCGTTTATGGGATCACCTTCTTCTCGATTAAATACGGCAACTCGGTATCGTCCCTGGGTGGACGCCGGGCTTAAATATGTCTTTTCGCCTGACAGGGCGGGGCATCCGGTGGAGGTAGCCGCTCCAGCTGCGGTCCAGTCCCAAGGGCCAGCTTCCCTTGCAGCCTCACCGCGGCCTCAAAGAGAGGCAGCACCAGCCCGCGAGATTGATACAAGCCGTGCAGCACCACCAAACGCACCAGCGTCAACTCAACCTTTTCCCCGTACCGCAACTTTTCCCGAACCATGGTCTACGTTCCTGTCCAAGGTCAAAGCCAGTTCACCCAAGGTCATCTGCACGTACATGGAACTGGGACTCGATCTTGGCGGTCAACCTGACCCGCGCAGAAGCGCCGTGCTCAAGTCGACGCTCAACACACATCTGAAGTGGCCTCCGGGCACTGCAGCGTTTTGGCCCATGTCAGCATTACGGCAGGGCAGTCTGCAACCCGACCGTGCCATGTTCTGGAAAGGGTGGGAGATTTGGCGGACACCGTACATTGTTTGTTTCGGTGATGAAGCACTCAGGGTTATTCATCCCGAAGGGGTGGCAGGGAACAATACGCATCTGCTGGAGCATGTCACCATACTTGTCGTGCCTCCCCTCGCCCGACTCATTTCCATGCTTCCGCATGAACAGCATCTTGCCACCGAAGGACTCAAGGCTGTCCGTCTGTGATAATTTTTGATCGGCGGAGTACCGTGTTACTCTCCAGCCTCTTCCACTTTAGCTCTTTGTTGTCTGCATTTCCCTTGTATGCCTGCAATTCGTTCATAATTGCGCGTTGACGCATTTTACGCCTTTGCGGGATAACCCGGGCTGGATTTTTAATAAAATGTCTCAGCGGCCCGATTTTCAGGAGCCATAGAACGCCAACGCTTTACCGGTGTTGTGTCTCCAAATGGTCAAATTCTGACCTTCCTGTCCCATGTCACTTGCCTAACGGCACCTGGATAGCGTATGAGATGCCCTTAAACCTGTGTCACCTGTGCCGCCCCTATTTTTCATAGAAGGTACAGGGAGAGCAAAACACCTTTTTTACAACAGGGATGCCCATAGCATGAAACTTCTTGTTACCGGAGCTGCCGGATTCATCGGCTTTCATCTTTCCTTACGCCTCACCAACGAGGGCCATGAAGTGGTGGGTCTGGACAATCTTGATCCATACTATGACGTCAACCTCAAGAAAGCTCGACTCGACATACTTTCTCAAAGCGAGCTATTTCGTCACGTAAACATCAGCCTTCAGGATGAACGCTCCATGAGTGATCTTTTCAAGACCGAAAAGTTCACCCATGTGATCAACCTGGCAGCGCAGGCCGGCGTCAGGTACTCCATCGAAAATCCCATGGCCTACGTGAACACCAACCTGGTGGGCTTCGCCAATGTTCTTGAGGGGTGCCGTCACAATGAAGTAGAGCACCTTGTTTACGCTTCCAGCAGTTCTGTCTATGGCATGAACACCAAGATGCCGTTGTCGCCTCATGAAGGGGTTGATCACCCCATGAGCCTGTACGCTGCCACCAAGAAGTCCAACGAGATGATGGCGCACTCTTATTCCAACCTCTATGATCTGCCCACAACTGGTCTTCGTTTCTTTACCGTATATGGTCCTTGGGGCAGGCCAGACATGGCGCTTTTCTTGTTCACCAAAAACATTCTTGAGGAAAAACCCATCAATGTTTTCAACTACGGCAAAATGCGCCGCGACTTCACCTATATTGATGACATCGTCGAAGGCGTAGTCCGTGTGACCAAAAACATTGCAACTGCCAATCCCGATTGGGATGGTGATAATCCCGATCCTTGCACCAGCTCCAACCCCTACCGTGTCTATAACATTGGTAATAACCAGGTTGTGGAGTTGTCGCGTTACATAGAGGTCATCGAAGAGGTTGTCGGCAAAAAGGCCATCTACAACTATATGCCCATGCAGCCGGGCGATGTTCCTGCCACCGAGGCAGATGTCAGCGATTTGATGCAGGATGTTGGATTCAAGCCCGACACCAGCATTGAATTCGGGATTCGGAAATTCATCGAGTGGTACCGAGAGTATTACAACGCTTAGTTCTACTTTCCAGTCTTCGCCGAAGCTATCTAATCGATATCAAAGAGCGCGATCCAATCAGGGTCGCGCTCTTTTTTGTGTGATTTTATCCTGATCAACTTGCCTTCATTTTCATTTCGTCCTACGAACACGTTGAGCACTGACTGATCTGTTTCACGTGAAACAATCATGACAGAAGTGACATGTTTCACGTGAAACATTGCACTGAATCCACAACACCGTGGTCAAGCGAGGATCGTGTGGCGAGAAGAATCGTTGTAGCTAATCAGAAGGGCGGTGTCGGCAAGACGACCACGTCCGTGAATCTGGCGGCGTCTTTGGCGGTGATGGAAAAAAAGGTTTTATTGGTGGACTGCGATCCACAGGGGAACGCCTCGAGCGGGCTCGGGTTCTACCCGGGAGACAGACGCGAAAACATCTACACCGTGCTGTTCGACCCCAAGAAGGTGCACAAAGCCATTTACGAAACCGACGTGCCGTTCCTCCATATCCTGCCGGGAACGCAGGATCTGGTAGGTGCTGAAATCGAATTGGTAGGGGAGATCGGACGCGAACATTACCTGCGGGAATTGGTGATGGGGATTGATGAGGAGTATGATTTCATCATCATCGATTGTCCTCCGTCCCTTGGGTTGCTTACGGTCAATGCCCTTTGCGCAGCAACGGAGATGCTGGTCCCGCTTCAGTGTGAGTATTACGCTTTGGAAGGTATAGCGCAGTTGCTCATGACATACGAAAAGGTGCGCAAGAGACTTAACACCGAGTTGAAGATTCTCGGCGTGGTTCTGACCATGTATGATGGGAGGAACCGGCTGTCCTGGCAGGTCAAGCATGAGGTGCGCAAGGCCTTTCCTCAGCATCTTTTCGATACGATCATACCGCGGAACGTCCGTCTTTCCGAGGCGCCAAGCTTCGGCAAGCCCGTGATCAATTACGATATCAAGTCAAAAGGGGCTGAGGCCTACCTGGCACTGGCGCAGGAAGTGGAGAGGAGCTCCACGGCGCCGGCCTGATCAAGTTCTTTCACAAACGAAAACACCCCGGAGAACCGGGGTGTTTGCTAGGCCCAAAGGGGAGATGATCAGTACCGCGCTTCCTTGGTGTCGTCCTTTTCATCCTGGTAAGGAGAGCACTCGGTCAGGATTTCGTCCTTGAAATGCCGTTTGATTATCCTTGATTGACATTTGACGCATTTGAATGCGACCAAGCCGGCCAAGTTGGCGGACGTCAGGAAAAAACGGCGTGGATTGTCGGCTTCCCAGTCCTCAGTAGCGTTACCGCAATGCTCGCAGGCAACGTCCTTATCGACAGGGTAGTCAAAGTCCCAGTACTCTTGGAGCGTCTGCCAGTCAGAGATCGGCTCGGCCATGGGTTCGGGCTCCGGTTTTTCGGCCAGGCCAAGTGCCTTGAGCACGTCCTCGCGGACATGAGCCCAGGCCTCGGCAGTCAGCAGGGCGCCGATAAGGTTCCCGTTTTTATCATAGAGTTCATTGATGTGGTCAGACATGTCGGCTCCGTTGGTTCATGATGTGCTTTCGGGGCGTTATAGGCGCTTCCGTGCCAATGGGCAAGCGCGCAGAGATCAAGCAAGAGGAGAGCATATGAGTTCGGGTAACAGAGGGCTTGGCCGTGGGCTCGACGCCCTGTTGGGTGGGGTTAGGGAAGATGCCGAGATTACGGTTGAATCGTCGGAAGTCCGGATGATTCCCATCGCGTCCATCACGCCCAACCCCCACCAGCCGCGACGGGAGTTTTCCAGGGAAGCCCTTGAGGACCTCAGTTCTTCCATCAAGGCGCGTGGCGTACTCCAACCGGTGCTTGTCCGGCCCTTGGAAGAAGGGCGCTACGAGCTGGTCGCAGGTGAGCGTCGTATGCGCGCTTCCAAGATGGCCGGTCTTGAGGAGATTCCCACGCTGGTCCGGGACATGACCGACCAGGAGAGTCTGGCCATCGCGCTCATCGAGAATCTCCAGCGCGAGGATCTCAATGCGGTGGAGGAAGCTCTGGGGTATCAGCAGTTACAGCGCCAGTTCGGCCTCAGTCAGGAGGAACTGGCCAGGCAGGTGGGCAAAAGCCGGTCCGCAGTGGCCAACTCGTTGCGACTTTTGAATCTCCCCGAGTCCATCCAAACGGATATCCAGCAGGGTGCGTTGACGGCGGGGCACGGTCGCGCCATCATGTCGGTTGCCGACAACGCCATTCAGGACGAGTTGCACCGCCGGATTGCTGATAACGGTTTGACCGTCCGGCAGGCTGAAGCGCAAGCCGTGTTCTGGAAGCAGAACGGCAGACTCCCTGGTGCGGAAGAGGTTGGTGAACCTGTGAGCAACTCCAGGAGCGGAACATCCGTGACCAAGCCCATTGATCCAAAACTCAAAGAGCTACAGACACGGCTGGGTGACTTGCTGAATATTAAGGTTAAAATTTCAGGCAGCCAGGAAAAAGGCAAGATTACGATGAGTTATTCAGATGAAGATTCATTGCGGTCTATTGTGGAAAAATTGGGTTCCGAGATGATTTGAACCCCTGACTTAATCAGTGGGGGCAGACTTCATCCGTGATCGGATTGCGATGATCATCTTGTCGTGGCAAAATAGATGCACTTGGCAACCCGGAATCTTTCAACCAACACAAAAATAGGAATCATCGGCAGCTTCTTTATGACTCTAGAACAAATCCATTCCGCCATAGCCGCGCTCAAAGGCAACAAGGTCATGATCATTGGCGATCTGATGCTGGATCATTACATGATCGGCGGTGTTGAGCGCATTTCACCGGAGGCGCCTGTTCCCGTGGTCCGCGTGGAGCGGGAGTCTTCCCTGCTCGGTGGCGCAGGTAACGTCGCCCGCAATATTGTCTCCCTGGGCGGTCATGCGATGCTTGTTTCCACCGTGGGTACGGATGAGGACGGCAATACCCTGGATCGGCTTTGCCGGGAGGCAGAAATCGCTACGAAGCTCATTCGCGACCCTGCCCGCCCAACCACCAAAAAAACCCGTATCATCGCCAGCAACCAGCAGGTGGTCAGGGTAGACCAGGAGTTGGCAGTACCCCTGCAACAGGCCGAGTTCGACGAATTGTTCAACTATCTGAGCAGCGTGATCAATGACTATCCGGTGATCATTCTGTCCGACTACGGCAAGGGGTTCATTTCCCGGGAGTTCATGGATCGGTTCATGTGCCTGATAGAGACCTGCGAACGCCGTCCGCTGGTCCTGGTCGACCCCAAGACCGTGAATTACGACCTCTACACCGGGGTGGACTTGCTCACTCCCAACACCAAGGAAGCCGGGGAGGGTGCCGGGTTCCCGGTGACGGGGCAGGATACCGTCATCCGGGCAGGACGAGCCCTGTTCGAGCGTCTGTGCTGCAACAACCTGCTGATCACCATGGGCGGAGACGGCATGGCCCTGTTCGAGGGAGTGGACTCCATTCGGCACATCCCCACCTTTGCCCGCAAGGTCTATGACGTGACAGGTGCAGGCGATACGGTCATTGCCACCGTGGCCTTGGCGCTGTCAGCCGGGATTGGCCTCCTGACAGCCTGCACCCTGGCAAATTACGCAGCCGGCATAGTGGTGGGCCAGGTGGGCGCGGCCACAACCTCGCTTGAAGAAATGGCGGAGACCGTAGACGAACTCCCGGAACCTCAGGTTACCAACTGGTGAAGAAGCCCGGTCATGCTCGACACGCGCGCCGTTCTGGCCGATGATGCTGCATAGGGAGTACGCCGATCAACCGGATCGCCCTGGAGGAAACCATGTCGAAAGAAGCTGTATTGAAATACAATACCGAGATTCCGACCCTTGGCCCGGCCAAGACGACCACCCCCCTTGGCCACACCAAGTATGTGGATGAAAGCCAGCCGCAGAGTCTGATCATGACGCCCGAAGAGCTGGCCGAGCTGGAAAACGATACTGTGACCATGCACTTCGAAAAGGCAGGGCCGCGAAAGAAAATCTACTTCGACCCCTCAAAGACCAAGTGTGCCATCGTCACCTGCGGCGGTATCTGTCCGGGCATCAACGATGTCATCAGGGCTCTGGTCCTGGAGGCGCATTTCAACTACAACATCCGCACTGTTCTTGGAATTCGTAATGGATTTCGAGGTTTTATCCCGAAGTATGGCTACGACGTCATGGAGTTGACTCCCGAACGGGTGACCAATATCCACCATTTCGGCGGCACCATTCTCGGAACCTCCCGGGAATTGCAGGACCCGGCCGAGATCGTCGATTCCCTGGAGCGGCTCAATATTAACGTCCTGTTCGTTATCGGCGGCGACGGCTCCATGCGGGCCGCCAAGGCAATCATGGATGAAACTTTCCGCCGCAAGCGCAAGATATCCGTCATCGGGATCCCCAAGACCATCGATAACGACATCAACTTTATCACCCGATCCTTTGGTTTTGACACGGCGGTAGGGAAGGCCACCGAGGCTATTCAGTGTGCCCACGTCGAGGCTACGGGCGTGGACATGGGCGTCGGCCTGGTCAAGCTAATGGGCAGGGAGGCCGGCTTTATCGCGGCTCAGGCGACCCTTGCCTTGCAGGAGGTCAATTTCCTCCTCGTGCCCGAAGTGAAGTTCTCCCTTGAAGGGGAGAACGGTTTCCTGGCCGCCCTTGAGCGAAGGTTGGACTCTCGGAAGCACGCCGTTATCGTCTGCGCTGAAGGAGCCGGTCAGGACCTGATGTGCGAAAAAATCAAACGGGATGAATCCGGAAATCCTGAATTGGGCGACATCTGCGGCCTGCTCATGCAGCGCATCAGAGAATATTTCGAAAAACGGGGCAAAGAATGCACTCTCAAGTTCATTGATCCCAGCTACATAATTCGTTCCGTGGCGGCCAATGCCGCTGACAGGGTCTATTGCACTTTCCTTGGCCAGCAGGCCGTACACGCCGCCATGGCAGGTAAGACAGGTATGGTCGTGACCCATCTCAAGTCCAGCATGGTTCATCTTCCCTTGGATCTGGTGGCCCTCAAGCGTCGTTCTCTCAATCCGCACTCCGACTACTGGTGCACGGTAATGGAATCTACTGGCCAGGAGAGCTATTTCCTGACGTAG

Protein sequences of DBSCAN-SWA_1

>NZ_CP046400|1147367:1155732|1147367_1148588_+|WP_158946738.1|DBSCAN-SWA
MQAHYGFAGFMGKRVHLGVCGSIAAYRALDLVRAFLDADCMVSATVTDAAARFVTPLSFEGLGASPVYTGMFDAATERESAFGHLEPGQTCEVMVIAPASANTIAKLANGLADDMLSCQALAFAGPKVVAPAMNPRMWANPVTRRNWDMLEKLGFIGVVPETGKVACGDTGTGRLAPVEEIFLAGLKALSPQDLNGKRVMVTLGPTREPWDAVRFWSNPSSGTMGACMAMAAYLRGAEVTVVAGPTALSFPSGMSVVQVQTAQQMNAACQDLWPSMDVACATAAVADFRPVLYGPDKFKKEQGDGLHVDFVPNPDILKGLGVSKQGYQRLIGFAAETRNIKSEASRKLKSKNLDLIAANDVSREGSGFGTATNQMYILDKAGRQESWPKLPKTEVAWRLWDHLLLD
>NZ_CP046400|1147367:1155732|1151745_1152171_-|WP_158946742.1|DBSCAN-SWA
MSDHINELYDKNGNLIGALLTAEAWAHVREDVLKALGLAEKPEPEPMAEPISDWQTLQEYWDFDYPVDKDVACEHCGNATEDWEADNPRRFFLTSANLAGLVAFKCVKCQSRIIKRHFKDEILTECSPYQDEKDDTKEARY
>NZ_CP046400|1147367:1155732|1149656_1150664_+|WP_158946740.1|DBSCAN-SWA
MKLLVTGAAGFIGFHLSLRLTNEGHEVVGLDNLDPYYDVNLKKARLDILSQSELFRHVNISLQDERSMSDLFKTEKFTHVINLAAQAGVRYSIENPMAYVNTNLVGFANVLEGCRHNEVEHLVYASSSSVYGMNTKMPLSPHEGVDHPMSLYAATKKSNEMMAHSYSNLYDLPTTGLRFFTVYGPWGRPDMALFLFTKNILEEKPINVFNYGKMRRDFTYIDDIVEGVVRVTKNIATANPDWDGDNPDPCTSSNPYRVYNIGNNQVVELSRYIEVIEEVVGKKAIYNYMPMQPGDVPATEADVSDLMQDVGFKPDTSIEFGIRKFIEWYREYYNA
>NZ_CP046400|1147367:1155732|1150903_1151677_+|WP_158946741.1|DBSCAN-SWA
MARRIVVANQKGGVGKTTTSVNLAASLAVMEKKVLLVDCDPQGNASSGLGFYPGDRRENIYTVLFDPKKVHKAIYETDVPFLHILPGTQDLVGAEIELVGEIGREHYLRELVMGIDEEYDFIIIDCPPSLGLLTVNALCAATEMLVPLQCEYYALEGIAQLLMTYEKVRKRLNTELKILGVVLTMYDGRNRLSWQVKHEVRKAFPQHLFDTIIPRNVRLSEAPSFGKPVINYDIKSKGAEAYLALAQEVERSSTAPA
>NZ_CP046400|1147367:1155732|1152265_1153186_+|WP_158946743.1|DBSCAN-SWA
MSSGNRGLGRGLDALLGGVREDAEITVESSEVRMIPIASITPNPHQPRREFSREALEDLSSSIKARGVLQPVLVRPLEEGRYELVAGERRMRASKMAGLEEIPTLVRDMTDQESLAIALIENLQREDLNAVEEALGYQQLQRQFGLSQEELARQVGKSRSAVANSLRLLNLPESIQTDIQQGALTAGHGRAIMSVADNAIQDELHRRIADNGLTVRQAEAQAVFWKQNGRLPGAEEVGEPVSNSRSGTSVTKPIDPKLKELQTRLGDLLNIKVKISGSQEKGKITMSYSDEDSLRSIVEKLGSEMI
>NZ_CP046400|1147367:1155732|1148899_1149274_+|WP_158946739.1|DBSCAN-SWA
MELGLDLGGQPDPRRSAVLKSTLNTHLKWPPGTAAFWPMSALRQGSLQPDRAMFWKGWEIWRTPYIVCFGDEALRVIHPEGVAGNNTHLLEHVTILVVPPLARLISMLPHEQHLATEGLKAVRL
>NZ_CP046400|1147367:1155732|1154424_1155732_+|WP_158946745.1|DBSCAN-SWA
MSKEAVLKYNTEIPTLGPAKTTTPLGHTKYVDESQPQSLIMTPEELAELENDTVTMHFEKAGPRKKIYFDPSKTKCAIVTCGGICPGINDVIRALVLEAHFNYNIRTVLGIRNGFRGFIPKYGYDVMELTPERVTNIHHFGGTILGTSRELQDPAEIVDSLERLNINVLFVIGGDGSMRAAKAIMDETFRRKRKISVIGIPKTIDNDINFITRSFGFDTAVGKATEAIQCAHVEATGVDMGVGLVKLMGREAGFIAAQATLALQEVNFLLVPEVKFSLEGENGFLAALERRLDSRKHAVIVCAEGAGQDLMCEKIKRDESGNPELGDICGLLMQRIREYFEKRGKECTLKFIDPSYIIRSVAANAADRVYCTFLGQQAVHAAMAGKTGMVVTHLKSSMVHLPLDLVALKRRSLNPHSDYWCTVMESTGQESYFLT
>NZ_CP046400|1147367:1155732|1153324_1154332_+|WP_158946744.1|DBSCAN-SWA
MTLEQIHSAIAALKGNKVMIIGDLMLDHYMIGGVERISPEAPVPVVRVERESSLLGGAGNVARNIVSLGGHAMLVSTVGTDEDGNTLDRLCREAEIATKLIRDPARPTTKKTRIIASNQQVVRVDQELAVPLQQAEFDELFNYLSSVINDYPVIILSDYGKGFISREFMDRFMCLIETCERRPLVLVDPKTVNYDLYTGVDLLTPNTKEAGEGAGFPVTGQDTVIRAGRALFERLCCNNLLITMGGDGMALFEGVDSIRHIPTFARKVYDVTGAGDTVIATVALALSAGIGLLTACTLANYAAGIVVGQVGAATTSLEEMAETVDELPEPQVTNW

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158946738.1|1147367_1148588_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	8.5e-36	31.5
WP_158946739.1|1148899_1149274_+	hypothetical protein	NA	NA	NA	NA
WP_158946740.1|1149656_1150664_+	NAD-dependent epimerase/dehydratase family protein	A0A2K9KZK0	Tupanvirus	1.7e-21	24.3
WP_158946741.1|1150903_1151677_+	AAA family ATPase	Q8JL10	Natrialba_phage	7.6e-22	36.2
WP_158946742.1|1151745_1152171_-	hypothetical protein	NA	NA	NA	NA
WP_158946743.1|1152265_1153186_+	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	9.0e-14	33.7
WP_158946744.1|1153324_1154332_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	3.4e-06	27.9
WP_158946745.1|1154424_1155732_+	ATP-dependent 6-phosphofructokinase	M4QN38	Ostreococcus_lucimarinus_virus	1.3e-13	28.1

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP046400|3033535:3041469|DBSCAN-SWA
TTTGGATAGAAGTGCTGTGGAGGCCGTGAAGGCCCGCATCAGCATCGCGGACGTGGTTCGCCGGTATGTGGACCTGAAACCGGTTTCCGGCCGGTTCATGGCCGCGTGTCCGTTCCATCAGGAGACCAAGCCCTCCATGTCGGTGAACGACGATGAGGGGTTTTTCTACTGCTTCGGTTGTCAGGCGTCCGGGGACGTCATTGATTTCTATTCGCGCATCAACGGCCTGGATTTTCGCGAGGCGCTGGAGCAACTCGCGGCGGAAGCGGGTATTGAACTGGGCAACGTGCCGCACGATCCACATGCTGCCGAGCGCAAGGCGCTGAAGCAGAAGCTTCTGGATATGCACGGCGAGGCCAATGATTTTTTCCAGCGCAACCTCCGCATGCAGGCGGGAGAGGGGGCCCGGCGCTACCTTGAAGGACGCGGCATGTCCCCGGAGATGATCAGCCGGTTCGGGTTGGGTTACAGTCCGGACGATTGGCATGGCTTGGACAATTTTCTGCGGACAAAAGGGCGGACACCGGAGGACGGTGTGATTGCCGGACTTTTGTCAAAGAATGAAAAAGGTAATATTTATGACCGGTTCAGAAGTAGACTGATCTTCCCGATCCAAAATTTATCGGGAAAGGTCATTGCTTTTGGCGGCAGAATAATTACAGATGGAGAACCCAAGTATTTAAACAGCTCGGATACACCTATTTACAAGAAGGGCGACCACTTGTACGGGTTGAATCTGGCACGGTCCACCATGACTCGTACAAAGCGGGCCATCCTGACCGAAGGATACATGGATGTCATATCGCTCCATCAGTTCGGCTACACCGATTCCTGCGGCGTTTTGGGCACTGCCCTGACTCCGGAGCAGGTAAAACGGTTGGCTGGCTTTTGCTCGCGCATCGATCTGATTTTCGATGGCGACGGAGCGGGACGCAAAGCGGCACTCAAATCGAGCAGGATGATTCTCCTGCAGGGGGTCGCTTGCAAGGTTGTTCTCATGCCCGATGGCGAGGACGTCGATAGCCTGTTGCAGCAACAGGGCACGGAGGGGGTGGAAGCCTGCATGGCCAATGCCCCTGACGGATTGCAGTTTTGTATGAACACCCTGCGCGCGGAGTTTGCGCCCAGGGATATTATGGCGTGGGCCAAGAGTTTTCTATCGGATCTGTCCGATGCCTCCCTGCGGGCATACTATTTGCCACGCATTGCAGGCGGGTTGGGCTTGTCCGAGGCTGATTTCAGGCGCGATGCAGGTGTTTCTGGACCGCCGCGCAATACCATTTCCCAGCCTCGACAACAGGCGAGACCCGCCGGAATTCCCGGGCAGTGCGCGGTAGGCAAGGAAGATAAGGACGACCGGTATTTTTTGAAGTTTCCCATCCAGTATCCGGACTATATTCCGGCTCTGGTGGAGAGGGGATTCGGACGCATACTCGGTACCGAGTGGGCAGTGGCGCTATGGAATAAACTTGTGAATGCGCAACAGGGCCAGATAATGAGCCTGTTGAATGACCAGGAAAAAAGTTTTTACATCCGGTGCCGCGAGGAAGTGCGTCAATCCGTCCTTTCGGGACACGAATTACTGTGCGAGTGGGAGCATATTTGCAAGAAAATTGCGGATGGACAGGAAAAATCAAGCAGAAGACAGCTCAAAGAGGCTTTGCGGCAGGCGCAATTGAGCGGCGACAGACAGCGCATGAACGAATGCTTCCGGGCCTTGGAAGAATCTCTCAGGAGGGACGATGAGCAATATTAAGGAAATCCAGCAGATAAAAACTCTTATCGCGGAAGGTAAGAAAAAAGGATTCCTGACTTACGACGAGTTGAGCAAGGCGCTGCCTTCTGACTGCAACACGCCGGAACAGCTGGAAGAAATTCATGCCATCTTCGACCAGATGGGTATTGCCCTGGTGGACGACGAAGGCAATGAGAAGAAGTTCGATACGGACGATAAGGACCTGAAGTTCGAAGAAAAAGACGATGAGGATAGCGCGGATTACGCATCCCGGTCTACGGACCCGGTGCGCATGTATCTGCGTGAGATGGGAGCCGTGCCCCTGCTGGACAGGGAAGGCGAAGTCGTCATCGCAAAGAAGATTGAAAACGGCGAGCTGGACGTTCTCTACTCTCTGGTGGAAGTTCCGGTTGCCGTGGAAGAGCTCATCGTTGTGGGTGAAGATCTCGAAGAGGGCCGCGTCAAGCTGAAGGATGTGGTCAAGACAATCGAAGAGGACGACCCGAGCGAGGATGAGATGAACCAGCGTCAGCGGGTCATCCACCTGCTGGCCGAGGTCAAGAAGCTCTACAAGAAGAAAAAGAAGATTTACGAGAAGCTGGACTACTGCGCCCAACCGGACAAACGCGTCTATGGAGTGCAGAAGGATATCCTCAGCTACAAGGACGAGGTCGTCACCCGGTTGCGCGACATCAAGCTGGAGAAGACGCTCATCGACCGGATCATCGAAACCGTCAATGACTACGTCCGCCAGATGCACAACTGTCAGCGCGATCTCTCCGCTTACGTCCTGTCCGTCGGCTTGACCAAGAGCGAGATCGAGGAACTGTTCAAGAAGGTTGACGACCGCGAGATCAACCCCGTGGTCGCTGCGGACCAGCTCGGCATGACCGTTGAGGAGTTCTTCTCCTTCAAGGAAATGCTCGCCGGCAAATTGGAGATCATGCACCGCCTGCAGGACAAGTGTTGCCATTCGGTGCACGATCTGGAGGAAGTTCTCTGGCGCATCAAGCGCGGCAACCAGTCGGCCATGCGAGCCAAGCAGGAGCTTATTCGCGCCAACCTCCGCCTGGTGGTCTCCATCGCCAAGAAGTACACCAACCGTGGCCTGCAGTTCTTGGATCTCATCCAGGAGGGCAACATCGGCCTGATGAAGGCCGTGGACAAATTCGAGTATCAGCGTGGATACAAGTTCTCGACCTATGCAACCTGGTGGATTCGCCAGGCCATCACCCGCGCCATCGCGGACCAGGCCAGGACCATCCGTATTCCCGTGCACATGATCGAGACCATCAACAAGCTTATCCGGACCTCTCGTTATCTCGTCCAGGAGCTTGGGCGTGATCCGTCTCCCGAGGAAATCGCCGAGCGTATGGACTACCCCCTGGAGAAGGTCAAGAAGGTGCTTAAGATCGCCAAGGAACCCATTTCCCTCGAGACGCCCATCGGTGACGAGGAAGATTCCAGCCTGGGCGATTTCATTGAAGACAAGAAGGCCGCCGCGCCTGCCGAGGAAGTGGTCTCTACCAAGCTCAGCGAGCAGATCGCGTCCGTGCTTTCCGATCTCACCCCGCGCGAGGAGCAAGTGCTCCGCAAGCGGTTCGGCATCGGAGAGAAATCCGATCACACCTTGGAGGAGGTCGGCAAACTCTTCAACGTTACCCGCGAGCGCATCAGGCAGATCGAGGCCAAGGCGCTCAGGAAGCTGCGTCATCCGGTTCGCAGCGCGTTGCTCCGGTCCTACTTCGAAAACTAGATCATCCAAAAGGCCGGGAGAACATTCTCCCGGCCTTTTTTCTTGCCCTGTTCGCACCGGGAGAAATCATGGAATCCGCCTTTTACGTTTTGCTCCTTCCGGCGCTTGCCGTATTCCTCGACGCTCGATTGGGCGATCCGCACCACTTTCCACACCCTGTTCGTTTCATCGGCAAAGGGCTGGATTCGTTTGAATACCTTGCTCGTAAAATTGGCCGAAATCTTCATTTAGCCGGATTCCTGGCCCTGGTTCTTTTTCCTTTGGCAGCATGGGGACTGGTGGCCTGGCTGATGGTCATTCCCTATGTCGGTTTTCTGATTGGCCTTTATTTCGCCTATGCGGGGCTTGCTCTTGGGTGCCTTCTGCGGGAATGCCGGGAAGTGGCCAGTAAAATCGATCGTGGGGACCTTTCTGGTGCTCGCATGGCCCTTTCCATGCTGGTCAGTCGCGATACCGATGCCCTGGATGAGCAGGGCATTCGCCGGACCCTGGCTGAGACCCTGAGCGAGAACCTGAATGACGGGTTCGTGGCCCCCTTGTTCTATCTCGTTCTGCTGGGACCGGGAGGTATGTGGGCTTACAAGACGGTCTCAACCATGGATTCCATGTGGGGATACAAAACCGAGGCCTATCGCAAACTCGGCTTTGCCGCAGCCAAGACCGACGACATCCTTGCCTATGTTCCGGCCCGGATTACAGCCTGGTTGCTCCTGTCGGTGGGGAAGGGCAGAGGCCTGGATGCCGATACGGCCAGGCGTTGTTTCAGGAAGGATGCAGCGAAGATGGAGAGCCCCAATGCTGGCTGGCCCATGGCAGCGGCAGCCTGGCTGCTCCAGGGGCAGATGGGAGGGGCAACAGTGTATTTCGGGAAGGTAAAGGAAAAACCAGTGCTTGGCCCCGAAGGAAAGCTCTGGGATGCGAGCATGATCCGCAAACTCATTGCCGTTTGTCAGGCGACTGGATATCGGGCCGCCTGGATTTTCATCCTTCTTTTCGGGGGGATTCAAACGGCATTCTAGAGTGTGCTGCAATAATATTGTTGCTGACAGTACACGCCTCTAGCGTGAAACAGCAATGGAGCCGGGAAGATGGATGTGGAAGGTCGTGCCTTCGTCCACCTCTGACTCGACTCTGATTCGGCCACCATAGTGCTCGACGATTTCCTTGCAGATGGCCAGTCCCAGGCCGGTCCCCAAAAACTTGCCGCCCATGGTGTCGCCGTTGCGGACAACATAGAATTTGTCAAAGATATTCACTAGGCTCTCTTCGGGAATCCCATGGCCCGTGTCCGAAACTGACAGATGGAATCCATTCGTTTCCGAGGCGATGCTCAATCGGATCATTCCCTGCTCGGTGAATTTGAAGGCATTACTGATCAGGTTGACAAGCATTTGTGTGACCTGGTCTGCGTCGACGCGAATGGCAGGCAGACCTTCCTCAAGGCTGGAAACGAACATTACGTCATCGGTTTCCAGGAATAGGCCTTCGACTGCAGCGGTCGATGCTTCAAGAATTTGTTCAAAGGAAACATCCTGGTCCTTCCATTCGAGTTGGCCGGATTCAATTTTCGCCAAATCCAGAACATTGTTGATCAGGCGGGTTAGTCTTCCACATTCCTTGCTGACGATGGTCAGATTGGTTGCGAGTTTCTCCTTTGTTTTTCGAAAGACTTCCGCGTCAGATTTGTATTCCAATGACGCGATTTGTTTCCGCTGTAATTGAGTGAATCCAAAAATGGACGTCAGTGGTGTGCGGAGTTCATGCGAGACCAGGGAAAGAAAGTCCGATTTGAGTTGATCCGCCTTCTGAGCCTCTACCCGAATGGTTATTTCACGCTGCAATCGATCATTCGCTTCCAGCAGACGGCTTTGTTCCTCTTCAAGCTGCCGGTTCTTCTGCAGCAACCTTTCATTGGTTTCATCCAGTGCCGTGAACATCCATTTCTGTATGGTGATGCCCATCAGAACGAAGATCGCGCCAAAAAAGAAGATGACAGCAACGAAGAGAGAGCTGGCAAATTCAATTCTCTCGAGAAAAAGAAAAAAGACGGCAAGATAACCAAGGAAAAAGAACACCATGAAGAATTGGTGGGACAGGATCAGAACCTTGGTCCGACGGGAAGTCGCTTTACTTTTCTTGCGAATGGCCTCGACTGTATGACGGTGGCTGCCGATGTTCACCAACATCAGCGCAGCTCCGAAGAGAATCAAGGCGCTCGAGAGAAGTGATACCCAACTCATCCATTCTCCATGAGAATATTTATTTATGCAGATGGGGCTATTATCCGTTGCCCGTATAAAAGGCAAGGATGGCGTTTTAAACGCAAAGGGCTCCCGGAGGAGCCCTTTGTTTTATTCGCCTAATTCAATACTTCGCAAATAGGATTCGAAGACTCCGTCAATGATGTTCCCGCGTATGGCGGTTCGATCGAAGTGTTGCAGGGCTCGAATGGTAGTGCCTCCCGGCGAGGTGACCATTTCTCGCAACTGCGTCACCGGGAACTCGCTCTGGTCCGCCAGCTTGGCCGAGCCGAGGAAGAGTCCCTTGACCATCTGTGTCGCCTGGGGGCGAGTGAGCCCTAGGGCAACACCGGATTCGATGAGGGCCTCCATGAAGTAGAAGACGTAGGCCGGGCCGGAGCCGATGACGCCGGTGAAGGCATCAAAGAGTTTTTCCGGCAGCACATGAGTCTGGCCGATGCCCTCCAGAAGGGAGGGAACCGTCGTCTTCATGTCGTCGGTCAAGTCCTTGTCGTCAAGACAGATGGCGGACACGGATTCGCCGACCAGGGCAGGGGTATTGGGCATGACGCGAACAATCGGGCAAAGGCCGTCGGTCCAATCTTTGAAAACGGCCACATTCAGGCCGGCGCAGATGGAGATCAGGCATTTTTTGGCGTTCAACTCGGAGGTGATTTCTTTCACCACCGGCTCGGCATGCTGCGGTTTGATGGCCAGGACGATGTAGTCACAGGCTTTGACCAGATCTACAGCGGTTTCCTGGGCCACGACACCACACTCTTTGCCGAGCTTGGTGACCATGCCCATGTTGAGATCGAAGCCGTGCAGCTCGACCGAATCACGGGAAGCAAGGCCGCGAATGATGGCCCCGCCCATGTTACCTACGCCGATGAACCCGATTTTCTTAGTCATTATCCCACCAATTCGTTCTCGTTGAAGAAGTAAGCCACCTCGGTCTTGGCGGTGTCGGGACCGTCGGAACCGTGGCAGGAGTTGTTCTGGATATCCTGGCCGTATGCTGCGCGGATGGTGCCTTCTTCGGCATCGGCCGGATTGGTGGCGCCCATCAGCTTGCGGTAGGCTTCAATGGCGTTTTCGCCTTCCAGGCAGGAGACGACCACCGGGCCGGAAATCATGTAGTCCACCAGTTCGCCGAAGAAGGGGCGTTCCTTGTGAACGGCGTAGAAACCTTCGGCCTTGGCGCGGTCCATGTGGATCATCTTCATGCCTTTGATTTTCAGGCCGGAGTCGGTGATCATTTTCAGGATTTCGGCGATCAGGCCGCGTTCGACAGCATCGGGTTTGATGATGGAAAAGGTTTGTTCAATAGCCATGTGTACCTCCAATTCTTGTCTCGTATACCTATCGGCAGTTTTTTGCCAGTTAAACAGAAGCTGCCCGGAAAACAGCTAACACAACAGCATGCGGTCAGAGATCTCCGCCTCACCACGCAGTTCCGAGAACCGCAGCAGAAGGTCTTCGACCTTGAGATTTTTCTTCTCCTCCCCGGAGATGTCCATGACGATCTCACCGCGGTGGAACATGACCAGCCGATTGCCCATGGTAATGGCCTGGTTCATATTATGGGTGACCATCAGCGCGGTCAGATTCTGCGAAGAGACGATTTCCTCGGTCAGGTCGAGGATCATGCCACCGGTCTTGGGGTCCAGGGCGGCTGTATGCTCGTCCAGGAGCAGCAGATTGGGGCGGACCAGGGTGGCCATGAGCATAGTCAGGGCTTGGCGCTGGCCACCGGAAAGCAGTCCGGTGAGCGTCTTGAGGCGGTCCTCCAGCCCGAGCTTGAGCACAGAGAGCTTTTCCTTGAAGAAAAGTCGGTCTTTCTTTTTGACCCCGAGTCCCAAGCCGCGGCGCTGACCGCGTTTAATGGCCATGGCCAGATTCTGCTCAATGGTCGCTCCGGCGCAGGTGCCGAGAAGGGGGTCCTGGAACACCCGCCCTATGAGCTTGGCACGACGGAATTCGGTCCATCGCGTGATGTCCTCATTCTCCAGCACGATGCGTCCCTCATCCAGCGGAAAGGTGCCTGCCAGGGCGTTGAGGAAGGTGGACTTGCCTGCGCCGTTGGAACCGATAATGGTGATGAAATCGCCATCCTTGACCTCGAGGTTGACGCCGTTCAACGCCTTCACCTCGTTGACGTCCCCTCTGTTGAACGCCTTGGTGATGTTGGAGATGCTGATCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP046400|3033535:3041469|3037093_3038044_+|WP_158949150.1|DBSCAN-SWA
MESAFYVLLLPALAVFLDARLGDPHHFPHPVRFIGKGLDSFEYLARKIGRNLHLAGFLALVLFPLAAWGLVAWLMVIPYVGFLIGLYFAYAGLALGCLLRECREVASKIDRGDLSGARMALSMLVSRDTDALDEQGIRRTLAETLSENLNDGFVAPLFYLVLLGPGGMWAYKTVSTMDSMWGYKTEAYRKLGFAAAKTDDILAYVPARITAWLLLSVGKGRGLDADTARRCFRKDAAKMESPNAGWPMAAAAWLLQGQMGGATVYFGKVKEKPVLGPEGKLWDASMIRKLIAVCQATGYRAAWIFILLFGGIQTAF
>NZ_CP046400|3033535:3041469|3035276_3037025_+|WP_158949148.1|DBSCAN-SWA
MSNIKEIQQIKTLIAEGKKKGFLTYDELSKALPSDCNTPEQLEEIHAIFDQMGIALVDDEGNEKKFDTDDKDLKFEEKDDEDSADYASRSTDPVRMYLREMGAVPLLDREGEVVIAKKIENGELDVLYSLVEVPVAVEELIVVGEDLEEGRVKLKDVVKTIEEDDPSEDEMNQRQRVIHLLAEVKKLYKKKKKIYEKLDYCAQPDKRVYGVQKDILSYKDEVVTRLRDIKLEKTLIDRIIETVNDYVRQMHNCQRDLSAYVLSVGLTKSEIEELFKKVDDREINPVVAADQLGMTVEEFFSFKEMLAGKLEIMHRLQDKCCHSVHDLEEVLWRIKRGNQSAMRAKQELIRANLRLVVSIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYQRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRYLVQELGRDPSPEEIAERMDYPLEKVKKVLKIAKEPISLETPIGDEEDSSLGDFIEDKKAAAPAEEVVSTKLSEQIASVLSDLTPREEQVLRKRFGIGEKSDHTLEEVGKLFNVTRERIRQIEAKALRKLRHPVRSALLRSYFEN
>NZ_CP046400|3033535:3041469|3040176_3040599_-|WP_158949156.1|DBSCAN-SWA
MAIEQTFSIIKPDAVERGLIAEILKMITDSGLKIKGMKMIHMDRAKAEGFYAVHKERPFFGELVDYMISGPVVVSCLEGENAIEAYRKLMGATNPADAEEGTIRAAYGQDIQNNSCHGSDGPDTAKTEVAYFFNENELVG
>NZ_CP046400|3033535:3041469|3040674_3041469_-|WP_158949158.1|DBSCAN-SWA
MISISNITKAFNRGDVNEVKALNGVNLEVKDGDFITIIGSNGAGKSTFLNALAGTFPLDEGRIVLENEDITRWTEFRRAKLIGRVFQDPLLGTCAGATIEQNLAMAIKRGQRRGLGLGVKKKDRLFFKEKLSVLKLGLEDRLKTLTGLLSGGQRQALTMLMATLVRPNLLLLDEHTAALDPKTGGMILDLTEEIVSSQNLTALMVTHNMNQAITMGNRLVMFHRGEIVMDISGEEKKNLKVEDLLLRFSELRGEAEISDRMLLC
>NZ_CP046400|3033535:3041469|3038083_3039265_-|WP_158949152.1|DBSCAN-SWA
MSWVSLLSSALILFGAALMLVNIGSHRHTVEAIRKKSKATSRRTKVLILSHQFFMVFFFLGYLAVFFLFLERIEFASSLFVAVIFFFGAIFVLMGITIQKWMFTALDETNERLLQKNRQLEEEQSRLLEANDRLQREITIRVEAQKADQLKSDFLSLVSHELRTPLTSIFGFTQLQRKQIASLEYKSDAEVFRKTKEKLATNLTIVSKECGRLTRLINNVLDLAKIESGQLEWKDQDVSFEQILEASTAAVEGLFLETDDVMFVSSLEEGLPAIRVDADQVTQMLVNLISNAFKFTEQGMIRLSIASETNGFHLSVSDTGHGIPEESLVNIFDKFYVVRNGDTMGGKFLGTGLGLAICKEIVEHYGGRIRVESEVDEGTTFHIHLPGSIAVSR
>NZ_CP046400|3033535:3041469|3039376_3040177_-|WP_158949154.1|DBSCAN-SWA
MTKKIGFIGVGNMGGAIIRGLASRDSVELHGFDLNMGMVTKLGKECGVVAQETAVDLVKACDYIVLAIKPQHAEPVVKEITSELNAKKCLISICAGLNVAVFKDWTDGLCPIVRVMPNTPALVGESVSAICLDDKDLTDDMKTTVPSLLEGIGQTHVLPEKLFDAFTGVIGSGPAYVFYFMEALIESGVALGLTRPQATQMVKGLFLGSAKLADQSEFPVTQLREMVTSPGGTTIRALQHFDRTAIRGNIIDGVFESYLRSIELGE
>NZ_CP046400|3033535:3041469|3033535_3035290_+|WP_158949146.1|DBSCAN-SWA
MDRSAVEAVKARISIADVVRRYVDLKPVSGRFMAACPFHQETKPSMSVNDDEGFFYCFGCQASGDVIDFYSRINGLDFREALEQLAAEAGIELGNVPHDPHAAERKALKQKLLDMHGEANDFFQRNLRMQAGEGARRYLEGRGMSPEMISRFGLGYSPDDWHGLDNFLRTKGRTPEDGVIAGLLSKNEKGNIYDRFRSRLIFPIQNLSGKVIAFGGRIITDGEPKYLNSSDTPIYKKGDHLYGLNLARSTMTRTKRAILTEGYMDVISLHQFGYTDSCGVLGTALTPEQVKRLAGFCSRIDLIFDGDGAGRKAALKSSRMILLQGVACKVVLMPDGEDVDSLLQQQGTEGVEACMANAPDGLQFCMNTLRAEFAPRDIMAWAKSFLSDLSDASLRAYYLPRIAGGLGLSEADFRRDAGVSGPPRNTISQPRQQARPAGIPGQCAVGKEDKDDRYFLKFPIQYPDYIPALVERGFGRILGTEWAVALWNKLVNAQQGQIMSLLNDQEKSFYIRCREEVRQSVLSGHELLCEWEHICKKIADGQEKSSRRQLKEALRQAQLSGDRQRMNECFRALEESLRRDDEQY

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158949146.1|3033535_3035290_+	DNA primase	B8Q5B5	Abalone_shriveling_syndrome-associated_virus	2.2e-37	31.5
WP_158949148.1|3035276_3037025_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	3.2e-36	33.9
WP_158949150.1|3037093_3038044_+	cobalamin biosynthesis protein CobD	NA	NA	NA	NA
WP_158949152.1|3038083_3039265_-	hypothetical protein	A0A1V0SGX0	Hokovirus	2.1e-23	31.8
WP_158949154.1|3039376_3040177_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.2e-25	29.1
WP_158949156.1|3040176_3040599_-	nucleoside-diphosphate kinase	A0A0G2Y5H2	Acanthamoeba_polyphaga_mimivirus	3.4e-16	36.5
WP_158949158.1|3040674_3041469_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.2e-10	23.9