CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP046772	Vibrio alginolyticus strain 2014V-1011 chromosome 1, complete sequence	1 crisprs	cas3,RT,DEDDh,DinG,csa3,csx1,WYL	2	1	4
NZ_CP046774	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence	2 crisprs	NA	0	2	2
NZ_CP046773	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed2, complete sequence	0 crisprs	DEDDh	0	0	1
NZ_CP046771	Vibrio alginolyticus strain 2014V-1011 chromosome 2, complete sequence	0 crisprs	csa3,cas3,WYL,DEDDh	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046772_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046772_1

2969617-2969864

Orphan

Consensus_repeat	Method
TAATGCCTCCTTAGCTCAGTAGGTAGAGCAACGGACTGATAATCCGC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP046772_1

>merge|NZ_CP046772|1|2969617-2969864|PILER-CR
TGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATTCCGGTAGTCGGCACCATTCTTTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCATATTTGGTGCACTTGCTTCATAAGCAAGACACAAAAAAGAATAATTCCTCCTTAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGC

>NZ_CP046772|1|1|2969617-2969864|PILER-CR
TGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGG	TCACCAGTTCGATTCCGGTAGTCGGCACCATTCTTTTGC
CTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCG	GTGGTTCGATTCCGCCTCGAGGCACCATATTTGGTGCACTTGCTTCATAAGCAAGACACAAAAAAGAATAATTC
CTCCTTAGCTCAGTTGGTAGAGCGACGGACTGTTAATCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046772.1\|WP_025767645.1\|2987304_2987610_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
NZ_CP046772.1\|WP_158174170.1\|2984184_2985507_-\|6-phospho-beta-glucosidase	unknown	unknown	gnl\|CDD\|133432
NZ_CP046772.1\|WP_054577162.1\|2960589_2960880_+\|YggU-family-protein	unknown	unknown	gnl\|CDD\|179931
NZ_CP046772.1\|WP_005384506.1\|2965515_2966235_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP046772.1\|WP_158174171.1\|2985882_2987226_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP046772.1\|WP_005381002.1\|2967534_2967807_+\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
NZ_CP046772.1\|WP_158174167.1\|2962179_2963358_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
NZ_CP046772.1\|WP_154205015.1\|2987857_2989141_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200570
NZ_CP046772.1\|WP_054702882.1\|2970172_2971798_+\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP046772.1\|WP_031777269.1\|2985519_2985831_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|224364
NZ_CP046772.1\|WP_017635575.1\|2966438_2967515_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_CP046772.1\|WP_005381029.1\|2980923_2982177_-\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP046772.1\|WP_064354314.1\|2972786_2974220_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143421
NZ_CP046772.1\|WP_158174168.1\|2982307_2983306_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380494
NZ_CP046772.1\|WP_005381001.1\|2967884_2969024_+\|membrane-bound-lytic-murein-transglycosylase-MltC	unknown	unknown	gnl\|CDD\|183271
NZ_CP046772.1\|WP_158174166.1\|2961558_2962161_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP046772.1\|WP_005381007.1\|2963450_2964371_-\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880
NZ_CP046772.1\|WP_005381010.1\|2961008_2961440_+\|DUF4426-domain-containing-protein	unknown	unknown	gnl\|CDD\|379616
NZ_CP046772.1\|WP_065274864.1\|2964469_2965498_-\|DNA-methylase	unknown	unknown	gnl\|CDD\|223971
NZ_CP046772.1\|WP_158174169.1\|2983410_2984166_-\|chitin-disaccharide-deacetylase	unknown	unknown	gnl\|CDD\|235007

Protein	Function_ID	Function_description	E-value
NZ_CP046772.1\|WP_025767645.1\|2987304_2987610_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.05599e-45
NZ_CP046772.1\|WP_158174170.1\|2984184_2985507_-\|6-phospho-beta-glucosidase	gnl\|CDD\|133432	cd05296, GH4_P_beta_glucosidase, Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP046772.1\|WP_054577162.1\|2960589_2960880_+\|YggU-family-protein	gnl\|CDD\|179931	PRK05090, PRK05090, hypothetical protein; Validated.	1.17156e-57
NZ_CP046772.1\|WP_005384506.1\|2965515_2966235_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	1.04237e-109
NZ_CP046772.1\|WP_158174171.1\|2985882_2987226_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	2.79391e-153
NZ_CP046772.1\|WP_005381002.1\|2967534_2967807_+\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	2.80095e-59
NZ_CP046772.1\|WP_158174167.1\|2962179_2963358_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
NZ_CP046772.1\|WP_154205015.1\|2987857_2989141_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200570	cd10946, CE4_Mll8295_like, Putative catalytic NodB homology domain of uncharacterized Mll8295 protein encoded from Rhizobium loti and its bacterial homologs. This family is represented by a putative polysaccharide deacetylase Mll8295 encoded from Rhizobium loti. Although its biological function still remains unknown, Mll8295 shows high sequence homology to the catalytic domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Both Mll8295 and SpPgdA belong to the carbohydrate esterase 4 (CE4) superfamily. This family also includes many uncharacterized bacterial polysaccharide deacetylases.	3.65259e-70
NZ_CP046772.1\|WP_054702882.1\|2970172_2971798_+\|chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.37635e-61
NZ_CP046772.1\|WP_031777269.1\|2985519_2985831_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|224364	COG1447, CelC, Phosphotransferase system cellobiose-specific component IIA [Carbohydrate transport and metabolism].	6.82212e-37
NZ_CP046772.1\|WP_017635575.1\|2966438_2967515_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
NZ_CP046772.1\|WP_005381029.1\|2980923_2982177_-\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	2.25733e-72
NZ_CP046772.1\|WP_064354314.1\|2972786_2974220_-\|NAD-dependent-succinate-semialdehyde-dehydrogenase	gnl\|CDD\|143421	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.	0
NZ_CP046772.1\|WP_158174168.1\|2982307_2983306_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380494	cd06270, PBP1_GalS-like, ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Ligand binding domain of DNA transcription iso-repressor GalS, which is one of two regulatory proteins involved in galactose transport and metabolism. Transcription of the galactose regulon genes is regulated by Gal iso-repressor (GalS) and Gal repressor (GalR) in different ways, but both repressors recognize the same DNA binding site in the absence of D-galactose. GalS is a dimeric protein like GalR,and its major role is in regulating expression of the high-affinity galactose transporter encoded by the mgl operon, whereas GalR is the exclusive regulator of galactose permease, the low-affinity galactose transporter. GalS and GalR are members of the LacI-GalR family of transcription regulators and both contain the type 1 periplasmic binding protein-like fold. Hence, they are homologous to the periplasmic sugar binding of ABC-type transport systems.	5.17015e-112
NZ_CP046772.1\|WP_005381001.1\|2967884_2969024_+\|membrane-bound-lytic-murein-transglycosylase-MltC	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	8.90498e-147
NZ_CP046772.1\|WP_158174166.1\|2961558_2962161_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	1.54896e-123
NZ_CP046772.1\|WP_005381007.1\|2963450_2964371_-\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0
NZ_CP046772.1\|WP_005381010.1\|2961008_2961440_+\|DUF4426-domain-containing-protein	gnl\|CDD\|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	4.01664e-66
NZ_CP046772.1\|WP_065274864.1\|2964469_2965498_-\|DNA-methylase	gnl\|CDD\|223971	COG1041, COG1041, Predicted DNA modification methylase [DNA replication, recombination, and repair].	2.25681e-08
NZ_CP046772.1\|WP_158174169.1\|2983410_2984166_-\|chitin-disaccharide-deacetylase	gnl\|CDD\|235007	PRK02134, PRK02134, chitin disaccharide deacetylase.	9.91634e-124

>NZ_CP046772.1|WP_005381001.1|2967884_2969024_+|membrane-bound-lytic-murein-transglycosylase-MltC
MKKIVFIAAALLMAGCSREFVEKIYDVNYEPTNRFANNLAELPGQFEKDTAALDALINSFSGNIQKRWGKKEIKYAGKSNYVKYIDNYLSRAEVDFRKGVITIETVSPTEPQKHLKDAIVTTLLTPDDPAHVDLFSSKGITLEGQPFLYKQVVDQDNKPIQWSWRANRFAEYLIANKIKTKNVDFKKAYYVEIPMVEDHFSTRSYQYADIVRRASKKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKKRSGQPSPEYLFNPENNIDTGTAYFYILKNRYLREVRHPTSLEYSMISAYNGGTGGVLNTFHRSDRKRAMQDLNSLQPNQVYWALTKKHPNAEARRYLEKVTNFKKEFNSKQTL
>NZ_CP046772.1|WP_005381002.1|2967534_2967807_+|oxidative-damage-protection-protein
MSRTVFCARLKKEGEGLDFQLYPGELGKRIFDNISKEAWAQWQHKQTMLINEKKLNMMDPEHRKLIETEMVNFLFEGKDVHIEGYTPPSE
>NZ_CP046772.1|WP_017635575.1|2966438_2967515_+|A/G-specific-adenine-glycosylase
MTPFASAILEWYDAYGRKDLPWQQNKTAYSVWLSEIMLQQTQVTTVIPYYQRFLERFPTVIDLANAEQDEVLHLWTGLGYYARARNLHKAAQEVASTYNGEFPLDIEKMNALPGIGRSTAAAILSSVYKQPHAILDGNVKRTLSRCFAVAGWPGQKKVENQLWEIAETHTPQTDVDKYNQAMMDMGAMVCTRSKPKCSLCPVADLCVAKQQGNVLDYPGKKPKKDKPIKQTRFVMLHHNTENGHEVWLEQRPQTGIWGGLFCFPQTEHVDAESDIELLLDQRGIQASNIKQKQTLITFRHTFSHYHLDITPILIDLSKQPDVIMEGNKGLWYNLSKPEEVGLAAPVKLLLETLPHELR
>NZ_CP046772.1|WP_005384506.1|2965515_2966235_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSEVTTNEYNEDGKLIRKIRSFVRREGRLTKGQESAMNECWPTMGIDFKAELLDWKEVFGNDNPVVLEIGFGMGASLVEMAKNAPEKNFIGIEVHSPGVGACLADAREAGITNLRVMCHDAVEVFEHMIPNGSLSTLQLFFPDPWHKKRHHKRRIVQLGFAEMVREKLIPNEGIFHMATDWENYAEHMIEVMNQAPGFENIAKDGDFVPRPDDRPLTKFEARGHRLGHGVWDIKYKRIA
>NZ_CP046772.1|WP_065274864.1|2964469_2965498_-|DNA-methylase
MYHYAILANPGHNRIYFDSAMTIACSELKAILASQGVDVTEIGSKDVGLPAALVFSCQEALTDEQARRIAASSIYYALFEVREDGLLRPVQAPVFNTFPESMSQILRYTGKTNEQFTRLMVNIGISASNTGSEQLTLMDPMCGKGTTLFEGLIHGLNVVGVEINAKWVQEIQTFIVKFMKNGRFKHKVSKEKRTAGGKKVADGFVVEAAANKEDYNQGHLQFMKLYSADTRIADQVVKKNSVDVMVSDLPYGVQHGSKNAKDSKLNRSPLELLKEALPAWKVVLKKQGSVVLSFNEFTLKWKDVAALFEEQGWKVLSEEPYIGYLHRVDQSINRNIIVAVKP
>NZ_CP046772.1|WP_005381007.1|2963450_2964371_-|glutaminase-B
MKPTVEILTDILAEVRPLIGQGKVADYIPALAKVPSNKLGIAVYTNEGEVIKAGDADEPFSIQSISKALSLTLAMCLYKQEEIWSRVGKEPSGQAFNSLIQLEMEQGIPRNPFINAGAIVVADLLQTRLSAPRQRLLEFVRQLSGDTHIVYDKVVAASEMMHGDRNAAIAYLMRSFGNFENEVIPVLQNYFHACALKMSCVDLAKTFSYLANKGTSVQTGKPVVSPVQTKQLNALLATCGLYDGAGEFAYRVGMPGKSGVGGGIIAVVPGEMTISVWSPELDPSGNSLAGTKALELLSERIGRSIF
>NZ_CP046772.1|WP_158174167.1|2962179_2963358_+|radical-SAM-family-heme-chaperone-HemW
MLTPPALSLYVHIPWCVQKCPYCDFNSHALKAEIPEEEYINALLEDLDTDIEKYRLNEAPRSLHSIFIGGGTPSLISAEGIERLLKGIEARIPFKPEIEITMEANPGTIEAERFVGYRKAGVTRISIGVQSFEQQKLERLGRIHGQDEAVNAAKLAHQIGLNSFNLDLMHGLPDQSIEQALADLDKAIELAPPHLSWYQLTIEPNTMFYYKPPTLPDDDDLWDIFELGHQKLAAAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGSHGKLSFTDGRIIRTTKVKHPRGYLAAYQNMVKPYLHTEHVVVDEDRPFEFFMNRFRLIEACPKQDYVDTTGLPLSTIQETINWAIEMGYLSETPTHWQITEKGKLFLNDLLEAFMAEESEE
>NZ_CP046772.1|WP_158174166.1|2961558_2962161_+|XTP/dITP-diphosphatase
MKKIVLATGNQGKVREMADLLSDFGFEVLAQSEFNVSEVAETGTTFIENAIIKARHAAQETGLPAIADDSGLEVDFLKGAPGIYSARYAGEKASDQENLEKLLKAMEGVPEADRTARFHCVLVLMRHENDPTPIVCHGKWEGRILTEAHGENGFGYDPVFFVPEDNCASAELEPARKKQLSHRGKALKSLFAQLSEQVSQ
>NZ_CP046772.1|WP_005381010.1|2961008_2961440_+|DUF4426-domain-containing-protein
MSKWITALLISLLSLPSFADQFKNMKDIEVHYVAFNSTFLTPKVARSYDIKRNGYLAVVNISVLDRASLGKPALEAKIAGRAKNLIGQTQTLTFREVKEGNAIYYLAELPITHEETFTFDIDVKAGNKGSGKLKFTQKFYVEE
>NZ_CP046772.1|WP_054577162.1|2960589_2960880_+|YggU-family-protein
MSAAVWQDGEDIILKLYIQPKASRDKIVGLHGEELKIAITAPPVDGKANAHLTKFLAKQFKIAKGLVHIEKGELGRHKQIRIESPTQIPIEIKAII
>NZ_CP046772.1|WP_054702882.1|2970172_2971798_+|chemotaxis-protein
MKLKTQAYLLSAIILLALLALTATGLWTLRVASNLDNKARVTELFKSAYSILTEVEKMAIEGKMPEDEAKALATRLLRNNIYKDNEYVYVADENMMFIAAPLDPQLHGTSFHDFRDGSGNSVGQLILDVLGHKTGQIVEYTWSQKQADGSIEEKHSIAEKTPHWGWVVGTGIGFNEVNARFWSTAQWQLALCLIIAGSILSGLIISIRKMLHLLGGEPNDVRKAVQAVAQGDIQTSFDTVAPRGSIYRAVQDMSQSLATMVTNLEKSMHALRAELFAVESRSNTIADLTVSQQQSTAMIATAMTEMASSANHVANSASDTANNTDEADKQSQHTQKLIHNTVENIQGLASQLNTASKAVADLDQDVNNIVKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQDSTKEIQYMISNLQEGSRNAIHTMEICAETSESTVTESKNASEALQQIVTALESITTMSQQIATAAAEQTQVSDDIALRINLIEESGGQLNSVVTESQSSTQSLASLANELEGWVNKFSVKH
>NZ_CP046772.1|WP_064354314.1|2972786_2974220_-|NAD-dependent-succinate-semialdehyde-dehydrogenase
MQQIKNETLKSVFKQWSSEEGIVVINPATEQELIRLKPSTLDELDDLIGQCKTEQVRWAKLSAKERSRRLRGWYQLLLDNAEDIATIITLEQGKPLAESKGEVMYGASFVEWFSEEAKRAYGEVIPAPTTDRRLSAIRQPVGVCAAITPWNFPIAMITRKAAPALAAGCGMLIKPSELTPLTAIAVVELAYQAGIPKELLSVMVSEQAAEFGQVLSTDPRIQKISFTGSTRVGKILMKQASDSVKAVSMELGGNAPFIVFEDADLDAAAEGLVASKFRNAGQTCVCTNRLYVHKNVKQAFIDKVLSKLSKLKLGNGLEKGVTLGPVITMASKHRLEAVIDQAVQEGASIANSPQRRPGRFMEPVLLDSVTQNMSIVQQELFGPVLPIVTFENDDQVLEMANDTEYGLACYFYTNSLKRIVTFSEGLEYGMVGVNEGIISTEVAPFGGVKESGVGREGAKQGLDEYLETKYICLGGLS
>NZ_CP046772.1|WP_005381029.1|2980923_2982177_-|HD-GYP-domain-containing-protein
MAAIKLTVDRIQPGLHIRLPLKWNDHPFLLNSFKIKDQEQVEMIRHLGVKFVYFNPEQSDAVPLPVDQRQADRVTNEASLDHETQKMWQEKQNRIEKLSAYRRRVIQCEKEFERSLARMRSVMTKIRNRPTAAVDEAKLLIEDIVEKLMCDDNVTLHLMNGKNEFEDIYFHSLNVAVISMMIGRAKGYSAAQLKELSFSALFHDIGKIKIPTAILRKQLPLTEPETNYLKLHTKYGVDLASQIEAFPEVARIVIAQHHELRDGSGYPKGLKGDEINEFAQIIAVANAFDNLCHTPIVSDQKIPYTALSHLYKNCKHLYKEENLNILIKFMGVFPPGTVVQLSNNMVGLVISVNASHLLFPNVLVYDPSVPRTQAPIIDLASKDIKIVNAIHPSKLPDKVKEYLNPRSRISYFFDSDE
>NZ_CP046772.1|WP_158174168.1|2982307_2983306_-|substrate-binding-domain-containing-protein
MARIKDVAELAGVNRSTVSRIINGEGKFREETRKKVEQAMAQLNYRPSAIARSLATSSSNMVGLLVTYYTGGFFGEMMEQVQTELDIHKKFLITAQGHHSAQGEKEAIQRFNDLRCDGYVLHSRYLSDDDLRELAKQPTPFVLLDRYVEGIEERCVTFNHHHASRIAVEHLLAGGHRKIACIAGPSQRHNSVLRKLGYIDAMKDAGIDIDESWCEEGNYGRQSGYDAMAAILQRHPDVTAVFSCSEEMTVGAMQYLHEHSIFVPEQISLTSFDSVDLCESLYPTVSAVHFPISDMARVAVQTLMGLVKDQEVIDKPVFEAKLKIRKADRSLK
>NZ_CP046772.1|WP_158174169.1|2983410_2984166_-|chitin-disaccharide-deacetylase
MKVIFNADDFGLTRGVNSGIVKAHQQGVVHSTTMMVGMDAEQHALELASHNPGLKVGVHLRFTAGVPITKHPNLTNGRAHFINYDELWSKQDFETQVVYDEAKAQVEHFLSLGLELSHLDSHHHAHTHPQILPVIKEVANEYRVPLRGTGLCQESMTIRYIFTDEFYDQKVSLDGLMAHLLSLKADYDLVEVMCHPAEADQALILKSGYALQRELELQVLTSPILKEQLAHHGITVTDYSELVSTNQMVSV
>NZ_CP046772.1|WP_158174170.1|2984184_2985507_-|6-phospho-beta-glucosidase
MSREAIKLAIIGGGSSYTPELVEGVIKRLEYLPVKKIHFVDIESGAEKLEIIKGLAQRMVDKAGAKIEIKAGFDRRAAIKDADFVMTQFRVGGLAARANDERIPIKYDVIGQETTGPGGFAKALRTIPVILDICKDIEELAPNAWMLNFTNPAGLVSEAVSKYTKVKSIGLCNVPVSMEMMIAEMMECEPKELQLEFAGLNHLVWVHKAWLNGEDITQTVLEKVGDGANFSMKNIWEEPWDHAFLKALGAIPCPYHRYFYQTDAMLAEEKQSADEKGTRAEQVMETENALFKLYQDPTLDHKPKELEERGGAYYSDASLNLVDSIYNNRNSIHVVNVLNNGAINGLPDDAVIECSAVIGSWGAKPLAVGELSNNIKGLLYQVKAYEQLTIEAAVEGNYDKALMALTNNPLVPDIGRAKSILDDILAVNAPYLPQFKLTTL
>NZ_CP046772.1|WP_031777269.1|2985519_2985831_-|PTS-lactose/cellobiose-transporter-subunit-IIA
MEQELVVMEIICNAGEARSLSYEALRLSREQDFEAADEKLSQARECINKAHLIQTQLIEEDQGEGKVPMTLVMVHAQDHLMTTILAQEMAVEIVALNKKISNK
>NZ_CP046772.1|WP_158174171.1|2985882_2987226_-|PTS-transporter-subunit-EIIC
MDSMKLYDAIICAVEKHIAPIAAKVGNQPHVRAMRDGFIVAMPFIIVGSFILIFAFPPFAEDTTFTFGRIWLDFATTHFDTIMVPYNMSMGIMTIFVSLGVAYSLAKAYKMDGITSAVLSLMSFLLIAAPAKDGALSMSHMGGTGIFTAVMCAFFSVELYRFMKKHNITIRMPEQVPPAIARSFEVLLPVLAIFITLYPLSLFVQTQYDMLIPDAVMAIFKPLISASNSLPAIIGALLLCQLLWFAGIHGAAIVVGLLSPIFLTNIGANIEAFVAGEPIPNVFTQPFWDFYIFIGGSGATLALVMLMSFSRSVHLKSIGRMSAVPGFFQINEPVIFGSPVVMNPTLFIPFVFAPVINATIAYFAVHVGFVGMGVATTPWTTPALIGASWGSGWTFAPVLLVIGLLILDLIIYFPFFKMFEKQMLEQELPTTKETKGDTQPSGEGVTA
>NZ_CP046772.1|WP_025767645.1|2987304_2987610_-|PTS-sugar-transporter-subunit-IIB
MKKILLCCSAGMSTSMLVKKMEQAAENKGIECKIDAMSVNAFEDAIKEYDVCLLGPQVRFQLEELRKTAQEHGKNIDAISPQHYGMMKGEEVLEQALELIN
>NZ_CP046772.1|WP_154205015.1|2987857_2989141_+|polysaccharide-deacetylase-family-protein
MKFNKLAIATLVSAALSQHSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFTENLSVLAKYLPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDNLKPWEPGYVCDTSNPSNSVKAAIEVQNILANNGYQTHGWDVDWAPENWGIEMPANSLTEAEAFLGYVDSALNTCAPTTINPINSKAQEFPCGTPLHADKVIVLTHEFLFEDGKRGMGATQNLPKLAKFIQLAKQAGYDFDTMDNYTPNWQVGHNYDAGDYVLHLGTVYQAVTNHTAQQDWAPSPTSSLWTNADPATNWTQNVSYKQGDVVTYQGLRYLVDVPHVSQADWTPNTQNTLFTAL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP046772.1	2969307-2969345	0	1.0
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP046772.1	3324838-3324876	0	1.0
NZ_CP046772_1	1.2\|2969750\|74\|NZ_CP046772\|PILER-CR	2969750-2969823	74	NZ_CP046772.1	2969393-2969466	14	0.811

1. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to position: 2969307-2969345, mismatch: 0, identity: 1.0

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccattc	Protospacer
***************************************

2. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to position: 3324838-3324876, mismatch: 0, identity: 1.0

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccattc	Protospacer
***************************************

3. spacer 1.2|2969750|74|NZ_CP046772|PILER-CR matches to position: 2969393-2969466, mismatch: 14, identity: 0.811

gtgtcggtggttcgattccgcctcgaggcaccatatttggtgcacttgcttcataagcaa	CRISPR spacer
gtgtcggtggttcgattccgcctcgaggcaccatatttggtgcacttgcttcataagcaa	Protospacer
************************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	296497-296535	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_LN868946	Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence	103819-103857	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	KU052038	Escherichia phage SerU-LTIIb, partial genome	1162-1200	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	KU052038	Escherichia phage SerU-LTIIb, partial genome	3068-3106	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	LN997803	Escherichia coli phage phi467	15126-15164	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP022660	Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence	52078-52116	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP045061	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence	52084-52122	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP045054	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence	52089-52127	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP045058	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence	52088-52126	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	35428-35466	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	MH791411	UNVERIFIED: Escherichia phage Ecwhy_1, complete genome	13645-13683	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	MH494197	Escherichia phage CMSTMSU, complete genome	196772-196810	2	0.949
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP054057	Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence	85817-85855	3	0.923
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NZ_CP023526	Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence	1925-1963	3	0.923
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	KY653118	Morganella phage IME1369_01, complete genome	698-736	4	0.897
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NC_049942	Escherichia phage JLK-2012, complete sequence	23522-23560	6	0.846
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	LC494302	Escherichia phage SP27 DNA, complete genome	76609-76647	7	0.821
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	NC_027364	Escherichia phage PBECO 4, complete genome	207832-207870	7	0.821
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	17115-17153	7	0.821
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	52945-52983	8	0.795
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	MH383160	Escherichia phage UB, complete genome	272124-272162	8	0.795
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	MK327931	Escherichia phage vB_EcoM_G17, complete genome	77929-77967	8	0.795
NZ_CP046772_1	1.1\|2969664\|39\|NZ_CP046772\|PILER-CR	2969664-2969702	39	KM507819	Escherichia phage 121Q, complete genome	77936-77974	9	0.769

1. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

2. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatca	Protospacer
*************************************.

3. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

4. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

5. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to LN997803 (Escherichia coli phage phi467) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccatat	Protospacer
************************************* .

6. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

7. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

8. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

9. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccactt	Protospacer
************************************.*.

10. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagccggcaccaatc	Protospacer
***************************.******** **

11. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to MH791411 (UNVERIFIED: Escherichia phage Ecwhy_1, complete genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
********************************** * **

12. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 2, identity: 0.949

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
********************************** * **

13. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 3, identity: 0.923

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccaaat	Protospacer
************************************  .

14. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.923

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgattccggtagtcggcaccagaa	Protospacer
************************************

15. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to KY653118 (Morganella phage IME1369_01, complete genome) position: , mismatch: 4, identity: 0.897

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
agtaggtcaccagttcgactccggtagccggcaccatat	Protospacer
******************.********.********* .

16. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 6, identity: 0.846

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
atcaggtcgccagttcgattccggtagccggcaccatat	Protospacer
* .*****.******************.********* .

17. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

18. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

19. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.821

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. ******************************* *  .

20. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

21. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

22. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 8, identity: 0.795

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
.. * ***************************** *  .

23. spacer 1.1|2969664|39|NZ_CP046772|PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 9, identity: 0.769

agtaggtcaccagttcgattccggtagtcggcaccattc	CRISPR spacer
gaaatgtcaccagttcaattccggtagtcggcacaaaat	Protospacer
.. * ***********.***************** *  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

871392 : 878176

Staphylococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005383771.1\|871392_872532_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.5e-63	42.0
WP_158173707.1\|872549_873800_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.1e-99	48.7
WP_005381578.1\|874006_874456_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_025768890.1\|874463_875591_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.9e-45	34.8
WP_158173708.1\|875599_876253_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.0e-32	36.6
WP_005381573.1\|876426_877536_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-65	39.8
WP_005381572.1\|877705_878176_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	48.7

DBSCAN-SWA_2

1311152 : 1320921

Mycobacterium_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158173774.1\|1311152_1314200_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.3e-88	48.0
WP_104978964.1\|1314261_1314888_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_045368976.1\|1314894_1316244_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	4.9e-85	43.2
WP_005437179.1\|1316335_1317643_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.6e-91	42.8
WP_017634398.1\|1317846_1318749_+	DUF3380 domain-containing protein	A0A291LBS7	Pseudomonas_phage	2.2e-36	43.5
WP_158174226.1\|1318738_1319167_+	hypothetical protein	NA	NA	NA	NA
WP_017634396.1\|1319304_1319571_+	DksA/TraR family C4-type zinc finger protein	A0A1S6UBD1	Serratia_phage	6.2e-16	46.6
WP_158173775.1\|1319640_1320921_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	3.6e-21	25.9

DBSCAN-SWA_3

2420173 : 2449662

Vibrio_phage(84.85%)

tail,terminase,capsid,integrase,head,portal

attL 2413560:2413604|attR 2449809:2449853

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2413560:2413604	attL	NA	NA	NA	NA
WP_158174075.1\|2420173_2420776_-	hemolysin	A0A2I7RNJ4	Vibrio_phage	4.4e-102	85.0
WP_158174076.1\|2420762_2421950_-	hypothetical protein	A0A2I7RNJ7	Vibrio_phage	6.3e-193	82.5
WP_025589745.1\|2421949_2422291_-	DUF2590 family protein	A0A2I7RNH9	Vibrio_phage	4.0e-44	80.9
WP_158174077.1\|2422290_2424177_-\|tail	phage tail tape measure protein	A0A1D9C9V3	Salinivibrio_phage	6.6e-221	59.0
WP_047508669.1\|2424370_2424634_-	hypothetical protein	A0A1D9C9R9	Salinivibrio_phage	1.7e-18	55.3
WP_045607483.1\|2424630_2424915_-	hypothetical protein	NA	NA	NA	NA
WP_158174078.1\|2424917_2425148_-	hypothetical protein	W6B371	Vibrio_phage	3.5e-07	42.9
WP_158174079.1\|2425144_2425642_-	hypothetical protein	A0A2I7S7C4	Vibrio_phage	9.8e-23	48.8
WP_031856783.1\|2425638_2425857_-	molecular chaperone DnaK	A0A2I7RNJ6	Vibrio_phage	1.2e-22	73.5
WP_158174080.1\|2425869_2426319_-	DUF2597 family protein	A0A2I7RNI0	Vibrio_phage	2.1e-77	96.0
WP_158174081.1\|2426322_2427453_-	DUF2586 family protein	A0A2I7RNI8	Vibrio_phage	7.3e-183	84.6
WP_158174082.1\|2427456_2428113_-	virion morphogenesis protein	A0A2I7RNI6	Vibrio_phage	1.3e-99	82.1
WP_158174083.1\|2428096_2428588_-\|tail	phage tail protein	A0A2I7RNH2	Vibrio_phage	6.8e-77	85.6
WP_158174084.1\|2428584_2429004_-\|head	head completion/stabilization protein	A0A2I7RNH7	Vibrio_phage	2.9e-52	76.3
WP_158174085.1\|2429118_2429835_-\|terminase	terminase	A0A2I7RNJ0	Vibrio_phage	1.4e-102	83.9
WP_158174086.1\|2429845_2430850_-\|capsid	phage major capsid protein, P2 family	R9TPZ5	Vibrio_phage	3.9e-111	63.7
WP_158174087.1\|2430849_2431707_-\|capsid	phage capsid protein	A0A2I7RNH1	Vibrio_phage	6.5e-99	66.9
WP_158174088.1\|2431873_2433625_+\|terminase	terminase	A0A2I7RNI3	Vibrio_phage	8.7e-308	88.1
WP_158174089.1\|2433621_2434650_+\|portal	phage portal protein	A0A2I7RNI9	Vibrio_phage	4.8e-149	73.5
WP_079765352.1\|2434728_2434980_+	ogr/Delta-like zinc finger family protein	R9TNQ2	Vibrio_phage	1.9e-35	85.5
WP_158174260.1\|2434981_2435254_-	hypothetical protein	U3PDF9	Vibrio_phage	2.2e-16	65.7
WP_158174090.1\|2436462_2436657_+	hypothetical protein	Q8HA45	Vibrio_phage	1.1e-17	73.4
WP_158174091.1\|2436660_2437140_+	hypothetical protein	Q8HA46	Vibrio_phage	1.5e-60	69.6
WP_158174092.1\|2437242_2439786_-	replication endonuclease	A0A166YHE2	Vibrio_phage	0.0e+00	64.4
WP_158174093.1\|2439827_2440103_+	hypothetical protein	NA	NA	NA	NA
WP_158174094.1\|2440326_2440554_-	hypothetical protein	U3PIK2	Vibrio_phage	4.3e-26	70.7
WP_158174095.1\|2440928_2441330_-	hypothetical protein	R9TRR4	Vibrio_phage	2.3e-54	75.2
WP_158174261.1\|2441326_2441893_-	3'-5' exoribonuclease	K7PM77	Enterobacteria_phage	7.2e-38	49.7
WP_158174096.1\|2441904_2442333_-	hypothetical protein	R9TNP8	Vibrio_phage	2.2e-10	43.2
WP_158174097.1\|2442407_2442743_-	hypothetical protein	NA	NA	NA	NA
WP_158174098.1\|2442752_2443292_-	transcriptional regulator	U3PIJ8	Vibrio_phage	3.4e-53	58.1
WP_045588167.1\|2443403_2443616_-	hypothetical protein	R9TMQ7	Vibrio_phage	1.2e-22	75.7
WP_158174099.1\|2443769_2444417_+	chromosome partitioning protein ParA	A0A166YHA0	Vibrio_phage	1.3e-86	72.9
WP_158174100.1\|2444447_2444951_+	hypothetical protein	A0A1D9C9Q4	Salinivibrio_phage	5.8e-47	58.3
WP_158174101.1\|2444996_2446583_+	DUF4041 domain-containing protein	A0A142LP25	Marinitoga_camini_virus	1.3e-79	63.8
WP_158174102.1\|2446725_2448624_+	hypothetical protein	NA	NA	NA	NA
WP_158174103.1\|2448639_2449662_+\|integrase	tyrosine-type recombinase/integrase	R9TMQ4	Vibrio_phage	1.7e-98	53.2
2449809:2449853	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2889194 : 2902663

uncultured_Mediterranean_phage(22.22%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_033907431.1\|2889194_2891777_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	5.9e-79	38.1
WP_005383799.1\|2891919_2892387_-	recombination regulator RecX	NA	NA	NA	NA
WP_158156857.1\|2892278_2892458_-	hypothetical protein	NA	NA	NA	NA
WP_005380874.1\|2892514_2893558_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	8.1e-112	61.0
WP_005383794.1\|2893758_2894241_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	1.8e-26	48.1
WP_033907432.1\|2894325_2896887_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.3e-30	23.2
WP_158174158.1\|2896969_2897956_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.9e-36	35.2
WP_017633546.1\|2898036_2898960_-	peptidoglycan DD-metalloendopeptidase family protein	D7RWE0	Brochothrix_phage	4.1e-06	35.2
WP_005380892.1\|2898973_2899600_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.3e-37	54.5
WP_005380894.1\|2899599_2900376_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.3e-66	49.4
WP_017821624.1\|2900375_2901419_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_005380896.1\|2901464_2901941_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_017821625.1\|2901955_2902663_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	A0A2H4UTB4	Bodo_saltans_virus	9.1e-06	23.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP046774

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046774_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046774_1

14913-15014

Orphan

Consensus_repeat	Method
AAGTTTTCGCATGCGAAAACTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046774_1

>merge|NZ_CP046774|1|14913-15014|CRISPRCasFinder
AAGTTTTCGCATGCGAAAACTTTTTCTCATATGCCCGTCATTTTTGGCGGGTATTTTTTTGCATGGAATTTGGTAAGAAGTTCTCGCATGCGAAAACTTTTG

>NZ_CP046774|1|1|14913-15014|CRISPRCasFinder
AAGTTTTCGCATGCGAAAACTTTT	TCTCATATGCCCGTCATTTTTGGCGGGTATTTTTTTGCATGGAATTTGGTAAG
AAGTTCTCGCATGCGAAAACTTTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046774.1\|WP_140203117.1\|1622_2699_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP046774.1\|WP_017634052.1\|26122_26446_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174272.1\|16459_17377_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP046774.1\|WP_158174275.1\|20303_25097_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376207
NZ_CP046774.1\|WP_017634054.1\|25093_25720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376207
NZ_CP046774.1\|WP_158174273.1\|17823_19269_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376185
NZ_CP046774.1\|WP_017634062.1\|15446_15686_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_017634061.1\|15689_16463_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP046774.1\|WP_158174267.1\|3189_3705_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174270.1\|5658_7332_-\|phage-portal-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_079878982.1\|17398_17731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174266.1\|2788_3262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174269.1\|4691_5645_-\|head-processing-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174274.1\|19551_20235_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_136976912.1\|25712_26126_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|292702
NZ_CP046774.1\|WP_158174271.1\|7713_14433_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|350180
NZ_CP046774.1\|WP_158174268.1\|4246_4600_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046774.1\|WP_017634054.1\|25093_25720_-\|hypothetical-protein	gnl\|CDD\|376207	pfam18788, DarA_N, Defence against restriction A N-terminal. This is an alpha and beta fold domain. It has a conserved aspartate, and an asparagine residue followed by a basic residue in a Nx+ motif. This predicted structural domain is mainly found in polyvalent proteins of phages/prophages. The P1 hdf protein, a solo version of the domain, and the Phage P1 DarA protein that contains this domain are components of the phage P1 head. The domain might be involved in a counter-restriction activity.	3.43975e-13
NZ_CP046774.1\|WP_140203117.1\|1622_2699_-\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	8.35945e-30
NZ_CP046774.1\|WP_158174271.1\|7713_14433_+\|N-6-DNA-methylase	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	6.36529e-07
NZ_CP046774.1\|WP_158174272.1\|16459_17377_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	8.24012e-30
NZ_CP046774.1\|WP_158174273.1\|17823_19269_-\|hypothetical-protein	gnl\|CDD\|376185	pfam18763, ddrB-ParB, ddrB-like ParB superfamily domain. A member of the ParB/sulfiredoxin superfamily of proteins found in polyvalent proteins prototyped by the version in the phage P1 ddRB protein. These proteins are predicted to function as nucleases.	2.08183e-49
NZ_CP046774.1\|WP_158174275.1\|20303_25097_-\|hypothetical-protein	gnl\|CDD\|376207	pfam18788, DarA_N, Defence against restriction A N-terminal. This is an alpha and beta fold domain. It has a conserved aspartate, and an asparagine residue followed by a basic residue in a Nx+ motif. This predicted structural domain is mainly found in polyvalent proteins of phages/prophages. The P1 hdf protein, a solo version of the domain, and the Phage P1 DarA protein that contains this domain are components of the phage P1 head. The domain might be involved in a counter-restriction activity.	8.25424e-17
NZ_CP046774.1\|WP_136976912.1\|25712_26126_-\|hypothetical-protein	gnl\|CDD\|292702	pfam16084, LydB, LydA-holin antagonist. LydB is a family of proteins that are antagonistic to the lysing action of holin LydA.	9.26865e-14
NZ_CP046774.1\|WP_017634061.1\|15689_16463_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.69354e-40

>NZ_CP046774.1|WP_158174271.1|7713_14433_+|N-6-DNA-methylase
MNTDLTRSIEQATTIDELVRQFEALLAVDISDTPKGHQRLKANQLAKDILAKYNGDYSNVSPEDKAALRDYTGFGGIGGSTNEYYTPKWLASATWDAVRSYGFTGGSVLEPSSGVGVFSETKPKGTLTTSVEMDQTSAAINQILHPEDHVIQSAFEAVATNPGIGDFDLVIGNPPYGVRDASAMKDKAYKDIKYADQYFVSRSIDKAKAGGLIALVLPTRICDAKNLEKWRTQLALKAEFLGAHRLPTGTFADTGVVTDLVIWRKHSDQAKALIDSADRDTLIESNVLWDTWLKGKWFEREGKKFINGEQTVEGVGKFARKVVKRGNRSNDDIKESLMRRFDSRIDWMLLDEAVSEPVSAKYSDGDTIFRNDQQYEMIDGEWELSESNAKTGVIIKATYGVDNTDEIGSITYSTESMLKLSASQALKLFEDYGYLCHDDFKALMREIAKLPKASQEHAYKGILLGMKVQTLATLVAGSRTTSNSDLANMAMGAEDFQTEQYRVKLSGEVLELNALMGGSKVSKKALSNLSEKYVSAWNYYHSSIDSKGKLSDLLKGDLKRELTVQYSSSRIGDVFHLCDRELGITTLTLHDVRTYYTASGIDAMSDEQLLDYLANMDEVAVNPDGTVTAFHKATTGLVGKRMDQLTAQLVSTTSDTVKANIMRQIQAIESKRNKISIADVKMKLTDKWIPKNIMLEFLHDRGYTEFILGDFTEDKDGFEDFVQSESGQYLTGYRWRDGEWIDGLTRNGVKGKAANSDERFERQIESYINYGAVRGGSKNEDKSLIREQMRRLDDEFSTWIASSDHSEYLEQVYNNTFNGWIKPEFDDSPLTLNGVSGAIEFLPYQNSTIRRHSADGNGIIAFGTGLGKTLTGLGLVQHNLETKRANRVAIVVPKSVLENWFYESDLFFGQSNLSDKVFIGLEVHKDDDGKIIREPVLDETGEPKLDKKGDPILRAKLTVDTNGKRVAEQLHQLTQSTARIVVMTKDVYNRIPLKPGTISANVLEMRDAGLIAGSSKLVKEAESHTEQAKNARFEAKYADDGTAKNEELPYFEDLLFDSVMVDEAHDFRNSYKGGSYRNNLAFLPSQAQADRAIDMQLKNNVIKARNDGRGVYFLTATPTVNSPVDMFNMLSHIIPADTFAKMGIFDSDDFIRMFGKTGEALVTKISGEVEQREALLGFQNLDALRNIVNRYMTIEDAKSVGANVHIPDLISQQSVVQMNGEQEALYEELRQRADAISNPDKDENQEIVEQYPNDTVFGLIRKMDKVSTDLDLYYERVTYRFAKDNKKEVEAAVAKLPNTVTVAFEDVAPDGTVKLSKIQVKVDKSVKVEGDHCVVQLHQQLDDRFTNICDKAKLKFTHPVSPKYAKFLENAREIYLAGGKQLVFTEEKTQHKKVARIIADFVGCKMSEIGILNSDTVAGKKGSKATEDDEEAGLEAMANAYNTSKYKFMILNKKGEVGINLHHGTTDIHHLTLPWTPMSITQRNGRGARVGSKQNSVNVHYYTSKGSFDDFRLATIQRKATWIETMFKGDEKYIANADADAADETAIMLAANPEEAKARIEAAKRQAERKRKLEERRLASINVSKYIKATQMLALDVSAVEGELAELREKLEPLRKEVEEDRLRAEGEKRGSWQHKNYQRTKGRLFALESQIKTYEAAIKNRDKASDTIKKLKPAMELAINDGVLKDYPDFLTHPELYIVRNGVIVRNGYTYKAEVKSRSWSAEYDSKATIMITNFDRKSGTVDGFITEMDGEPASRNYVDLPVERIIEIAPVNQDRAALEAKALQGVPLSEVAHTFDRETFFELVAEKKMKAYGNSRRCLVRNADGSFSTPWGLDVEPDQTLIYPDASDKAIVKALLDQVTKQLEDKGRVMLEHDILSFFIGSDWDKQAMENGNQVSEQEVVELVTLEIKAFEEKYPELYQEALLKAETTYKTSITFLKELDNHLSNLKWTGYTNAHEARRLSAREFTRYTDILTERSSEYRTELEDKLFADFTKLVANDPDRAKRLSQIAYWMTQYKPTTDTHLLKKVDAIYGENSQETMLKVCADLHAIGEREFLSGDGLIFSDDWSLNRMKGAYGSLFTYRSAQREEFIEKYLNADKPEKAEVKVTETQKVKIDNISAINVESIEKFSELMSGIGIDVKMVTSPISWKPKRGRNRKEIVVEPYERIGLMDNNGLKGSLKVMFAGDKEAKAEYGADFASNASSEFNGGWWFISAKADLELLAKSLLTIHNTMAEAA
>NZ_CP046774.1|WP_158174270.1|5658_7332_-|phage-portal-protein
MSQKKASIGLAAALKQAFPFFNENDDKESGISFESGAGYTGSPFHDREHQLDESNGALTNDGRKSSDRFFLHKLPKDRFMLYPILKEMAEDSTIDAALNLHLGHALSVSNDNGMAVYLHPTDEKYAEYVGRLNRELLTPINENLMNWTYSTLVYGVNYVRPYTKEGVGITHFEANYYTLPNQIREYERSGELAGFTAEYLQTRANGEQVRLAEPWALIPLKMPIWRPDMDIPPVNYTGQRYSLYDDAYSRMPIETQNYGTSILLTCFEAWSMLRQSIAALGASRVNASLIDRMVAVNTDGLDAAGAAEYINMVADQMKQDRQEVVDRSRKLGFIPTVINTLLPFMGGAKGGLQIDTFTTDPNISHIEDIMFHLKRLAGTLGVDPSMLGFGDLLSGGLGEGGFFRTSIQSALRANQIRAAVVTFVKRAIDIHTIYRDGKVWNDNDMPFEIRFNSLNTAIEQEKADAMESQANYATMLATVLDLIEQSPIGKSEKLKNHLYTSVIGLDSELAKEVISELAAQVSKNDKMMESIGMTDQSEAERFVRDVVLDLLTEIQSH
>NZ_CP046774.1|WP_158174269.1|4691_5645_-|head-processing-protein
MTAKALKQVSDRFSLFNDGRKLSANKRNYIIKAVQAMINSPRTQELLRLGEAYGYYGHQSRQRANKLSIGETEVIMINGRPVVVENVPSNRTVSITCSDDGIVEHTQEFLDTDTGRIALGLHNSRAGGWSWATGGQDTREASITTSYHGMDYVLQPNYISLDHPAMMMESANSKQMILESLQEQGFDEESARNIYANMTQQTNIELLGDLTNQLMYLESVNAELREQVEQNAKATSMLLDVVDSLPIYVTDAQRKAIANLATQEDHQVVRAMFESLGSRKMATLPTNSYVPVEQKVSVAPQIKQQFVNFGSSSRKFQ
>NZ_CP046774.1|WP_158174268.1|4246_4600_+|hypothetical-protein
MKFTPPPSAEQQLETQVNQLKQQFKRRQFPKKNAPALPLDLLVTISGCTFGLHSQKDGRLVLKADKAINFDKGVNVLRSVSYIAGARDSVSIAGWDWRPMHFKKDKLYLRPVAPSDL
>NZ_CP046774.1|WP_158174267.1|3189_3705_-|hypothetical-protein
MQITPLLLNPRYWKSGFRTQASNIKANKPLAQRKLACLLETISSFILKHGHTCFASSDTLMRTYNENCHRYGCQPITKRTVDTYISDAVDLHLIDRKSFQNRETGQNQRHITLCVDGIKNMFAGVYKYALQAAEKFCNRQKLHLGGLLWKNLLRSVLTRLASNQTKTKIAL
>NZ_CP046774.1|WP_158174266.1|2788_3262_-|hypothetical-protein
MEKPLEVSADKACEQSDKNENCTINTKDLSTESKNKINNGIPSDSWFLKIFKRDADEVKQLQLAAKQGRLSASGARRVIKLYNKHQQPLAPKFVSYLKFVIANWHNKAASAVKASVNKVRDTATMLAEYMNTISEKESQGLVEYYRDAVGRVQVRYL
>NZ_CP046774.1|WP_140203117.1|1622_2699_-|RepB-family-plasmid-replication-initiator-protein
MSDEEYFYPAVSDNLPKHIKKGHQLVFSRQDLSAREADMFALMIAHMKPSDWEQKTPHYEFTSHQLSEWLGVESKHIGSNLSPVANRLASRKIGIKVETPKGDIEFDYRPLFKHIAYKHGILTMVPNDMLKPEYIEYNQGFALINTRNFFEVKKEYSKRLYELLSRFKDKGFEMHAQKLSELKGIFGLLDESGKLKKDKSSFKNNSVFMKRCIRESIKELSEHPQISKELLFLESSQGDKGFEVVKKGRTITGIKFLFRWVKLGSIDELNQHDALKTIRQLELKRLQNQVRLTESELESLAIAYRYVGKEDHALKVEASLSKRHLEKEQQKHDDGMHELESLMEKIDTLSELTDTHDY
>NZ_CP046774.1|WP_017634062.1|15446_15686_+|hypothetical-protein
MASKERCERLNQLVQKAGSTRKAKQLIDGVKGVSPCHTAIYKAMHGGGTTDYVVQCYIEDLEVALSKPKQQTNSTSKGN
>NZ_CP046774.1|WP_017634061.1|15689_16463_+|ParA-family-protein
MSIIMAIANQKGGVGKTTCTYNFGISIASQGNKCLFLDFDPQNNLGGSIAPEMVENPEYTSASCLHNAYNLFENPVKAKPFEVSENVHVIGGDKRMGNITQSQILNVAESIDLIKDDYDYIFIDCPPAANALQHAALLVASKLLIISQAQKMSIKGVNELVKTSRQIRRMNPDLEVLGIVLNLIEANITNDQREQEAELRKEYGNLVFENKLIKTTRVSEALNQGKALIETNPKAAEKFGFTAVCEELCKRMVEVTA
>NZ_CP046774.1|WP_158174272.1|16459_17377_+|ParB/RepB/Spo0J-family-partition-protein
MTKSLRDRIKLSDLDNLLDESAVEIRDAAKVLAIPKDSLYSVEQVREEFNDESLLELCESLEENGQIQPVVVYPFDGKGYKIQEGERRWRAAMLSDKLTHVECIVREKGDIFGQLIENIQREDLTPIELGKAFDQAKKKHNLDNRGLAKRLGKSDGYISKYLNVLKAPDFVLEAFQKGIIGDVESINELRKATVDNSERVREALESGEKLTRQDCVKLRTGELDSKVEVAPQPSKPEKAEKTDKTPVSKKPTANQKPTSICVMVNDRHGLVFASGKHSDKLTVLFDDGELEQVPVGEAQLVGYRV
>NZ_CP046774.1|WP_079878982.1|17398_17731_-|hypothetical-protein
MFTIRHRYHYGLIDINEDGVADGHSVAGNEIPALRKDGEYIYRPFKGALDNIYLLHVQKVKLVNIVAYCDDELGLFGWQDVPLDHYVVGVYRDGGYYVLTKNGQLISHPL
>NZ_CP046774.1|WP_158174273.1|17823_19269_-|hypothetical-protein
MRKLANPTGAVKLNQLTSISAEIKEAKNINDLAEIVQLYATDNPKPKLGRTSYVVTAKGDEVETGFKVVEASDLIPSNDLDGRINPNFPQELQPRDRTRVSSKLQISKMANDLRPQQLTDSGLSSHGAPIVGSDNVVESGNGRTIAIIKAYREGKADKYRQFLIDNAERFDLSPEKVESMREPVLVRERVTKVNRAKFARDSNLSDLQQMSAAETAWVDAERIDDRMIALFQPSETGNLLAKSNQGFINSFLTEIGDNSTAGLLTEDGRPTKQLIERMQNAVFAKAYKNEKLVKLVAEEADPEIRNILSALNGAASAFVEMQYLSGEVHKNTSGTLAEAVEINASQPDLAKSALDSLVQATELVRQAKDSGQHIDELLAQSGLFGDNDPEAGALARFIAANNRSAKRMTLAFKAMAEAINSELLHQGQALGDMFGGGGASLIDILGRVNQELENEGVQTGFMFESSVQLDELANASRHAIK
>NZ_CP046774.1|WP_158174274.1|19551_20235_-|hypothetical-protein
MTLNRDAAGLLKELKSGQLSIGERIKKNRELVEILNKLTGANQKVEQEPVSSSDEPISVEEFSKLGRSDKIEKLNEVLLLPNWYEYEMAFFPNYQMVEKGDNYVVYKDGENFQFGFKGHIARGLDYWKNDAGSAKKNGGFGSWSRADRSKAIKIITKHIEQNERDNGERPVEQSELVARFLAGEFNTAKPSLFVDVMRDVHSEGLELDSIKQKAIEWFEHNPDKLAA
>NZ_CP046774.1|WP_158174275.1|20303_25097_-|hypothetical-protein
MMFTSQNQIKIVDRIDHLAKKLTPEQIEAVLQGKNADQILEALSLEDLENTYLYQCKPVPQMMLEAFKSKASRLEFRAQQFGKHLERKTPTLSVEAVEVGKPRKSGAVAVQMVKIPFSDGQSISIAFHAPDNDPLKINPDDTLIAFRFLMNSRDITHVVAPKGNMDLSLKEVTNKLAQLLENNSEKFVAAKAKKDADKKALEEAQQKAQELDEQAAQLGEEATDLEQKLDELAKKEKRLETQIATQNEIQEELRKQLAAIKPAANTATKNVNAGGSSSQVIEQWDASWTKQEKRDFIINRAFNGDLDAFVKQLSQEFKDSLEFAGAANQNVPSTYSESYINDVIYDLDKGAMTVSELAEAKEYIRDSIENDFPQLSDEERERKANIERKEWLLALIGRKTIAKGWKMDKGEDSEPFVYFESPDANDDDSFGQYMIHARDNQTLAVTYGEGSPLVGGDDLQGWEAVKSLILADYDRESKLLQDTDDSNEEPQPIENDEPNTNDQDKDETTDNLFWYGLRLRPYGLGTTPPQHQVAKYLDPESAKEQFADAGNGIRHGAIAYDQKLPLELVSNFDLEPLFGMVEGDLEEAERIATEALDQWVEDKGVDEIPQSTLDTLKQVGFKAAFAKQLRQQPEMKNRKENPNAYKLWSASIDLVTPDMIQEIAEDLMLVQSDAELQRQAEHTQGRMRFQEAALSQLKDMQSVNPSDRKRLVMLADLTLGTGKTLKRGEKVDDQAKRISEQAHLVESLQGETLASLEAQFKNRKEITDFLTAHRIPFNRRAKRADLLQAILNYRDGFFSATAKMFDLRALRGDLYEKFENGEALALDDVEKAFSATTVYHEGDVAYTKTKGETVIPAMADQGEDYQKVERFIKAIDDGIYPDLSELSSDELFAQHYAMASVTNQDILAIHGFRYLDNDEQIDNEQMARAIHNSVMPLWYTKAIEAEYESRGFPSLAALPDLNHKGQFKATREKRYAPVGTIGQSDFSVIDTYTGKVLETGLEGAAAQQKATQLNDQAVKESTIAIFNMLKDGKTLEQIAETEYSAPLEPVSPAMFTTINGFESLYSTLAINGSGSLHSRPTLRENADKLLAKVDADGKINDIALTEEQENQMENTFGYSFFSAKSNKGKELRFIANTNSRSYLTVDGANKLLELLGAKSAVESDTADEVSKGASEEEKQLLALDPTQYSFGSIYESEGIRDTGEIAKRIRAFIAQLKKAGKISNDVKISVRKPRYGTLDLTLTDLPRNVMLYNPAYLQFEIDNPNSPAPHGMSRYTEAVDQLIEFVNAYVGQYDYNNSDTMTDYHDRNFFGGRLTVDFDFGKERKVVELASLTEMHQQGEQAEDDVLDVTSFRESLDEEEAKALEQLEAFTNLELKLGKQEVTFPTGRVKSINAKDEDGLTYSLDVLFDILATDLSEKAKAQLETIKDWQSADDYYNEKGALVQPSVAAGIHSVNGSVPTNVYAPLIARSWLNESHADIYPIAKDGEYKFALYQGNDLIGEFDDTAEMEALLVKAFNLSSEAPQSETEGNNEEMEHVEKLKEIRDFTGEPTPELVDEFQTALEQAYAHFEANDQIAENEALMDAALSNITSMIQAQI
>NZ_CP046774.1|WP_017634054.1|25093_25720_-|hypothetical-protein
MRNNSKFALDQSHNYVVVDFDNVTERGLKSLITALKQAGATVTDVEASNKRTRRDGETVKRAKLFFDNGQSMTLFIGDEGDIFQMTLNSTKQPIPSVKNERELAREMVRLMKRNQSKFDKQVARKAAKAVKDTSDIQPATRSVAKRLEEAKAAEQVAQSNYTNALAARDSVRTKLEEEQRRIADLETALEQEKQETKELEAQLEAAKS
>NZ_CP046774.1|WP_136976912.1|25712_26126_-|hypothetical-protein
MMEFAVIGLAIADRFLLKRNAVKILHANQMDDPDVIRFVLGYQSQRAITSGTLTYSLRSKKRPKAVITRTRKLDFSHAGHNSEYLTFDRKLLELEAGEKLHGEWILDVKIERSCSLINPLYKIFPTCTTYSEEFEIA
>NZ_CP046774.1|WP_017634052.1|26122_26446_-|hypothetical-protein
MPVSVVGESFAISVLALSVLSGVGSYLQGIREQRLAGGFLDFLTELTLALVVGLIVAYLCESEGVEAGYTSALVLIASNNGADSINFIRKLASQMLARFFNTGGQGK

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Crispr_ID: NZ_CP046774_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046774_2

15276-15347

Orphan

Consensus_repeat	Method
AAGTTTTCGCATGCGAAAACTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046774_2

>merge|NZ_CP046774|2|15276-15347|CRISPRCasFinder
AAGTTTTCGCATGCGAAAACACATGGAATCAACCTCACAATTTATCTAATGTTCTTGCATGCGAAAACTTGT

>NZ_CP046774|2|2|15276-15347|CRISPRCasFinder
AAGTTTTCGCATGCGAAAACACAT	GGAATCAACCTCACAATTTATCTA
ATGTTCTTGCATGCGAAAACTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046774.1\|WP_140203117.1\|1622_2699_-\|RepB-family-plasmid-replication-initiator-protein	unknown	unknown	gnl\|CDD\|376444
NZ_CP046774.1\|WP_054579116.1\|14488_14914_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174272.1\|16459_17377_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP046774.1\|WP_158174275.1\|20303_25097_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376207
NZ_CP046774.1\|WP_017634054.1\|25093_25720_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376207
NZ_CP046774.1\|WP_158174273.1\|17823_19269_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376185
NZ_CP046774.1\|WP_017634062.1\|15446_15686_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_017634061.1\|15689_16463_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP046774.1\|WP_158174267.1\|3189_3705_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174270.1\|5658_7332_-\|phage-portal-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_079878982.1\|17398_17731_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174266.1\|2788_3262_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174269.1\|4691_5645_-\|head-processing-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_017634052.1\|26122_26446_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_158174274.1\|19551_20235_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046774.1\|WP_136976912.1\|25712_26126_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|292702
NZ_CP046774.1\|WP_158174271.1\|7713_14433_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|350180
NZ_CP046774.1\|WP_158174268.1\|4246_4600_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP046774.1\|WP_017634054.1\|25093_25720_-\|hypothetical-protein	gnl\|CDD\|376207	pfam18788, DarA_N, Defence against restriction A N-terminal. This is an alpha and beta fold domain. It has a conserved aspartate, and an asparagine residue followed by a basic residue in a Nx+ motif. This predicted structural domain is mainly found in polyvalent proteins of phages/prophages. The P1 hdf protein, a solo version of the domain, and the Phage P1 DarA protein that contains this domain are components of the phage P1 head. The domain might be involved in a counter-restriction activity.	3.43975e-13
NZ_CP046774.1\|WP_140203117.1\|1622_2699_-\|RepB-family-plasmid-replication-initiator-protein	gnl\|CDD\|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	8.35945e-30
NZ_CP046774.1\|WP_158174271.1\|7713_14433_+\|N-6-DNA-methylase	gnl\|CDD\|350180	cd18793, SF2_C_SNF, C-terminal helicase domain of the SNF family helicases. The Sucrose Non-Fermenting (SNF) family includes chromatin-remodeling factors, such as CHD proteins and SMARCA proteins, recombination proteins Rad54, and many others. They are DEAD-like helicases belonging to superfamily (SF)2, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. Similar to SF1 helicases, SF2 helicases do not form toroidal structures like SF3-6 helicases. Their helicase core consists of two similar protein domains that resemble the fold of the recombination protein RecA. This model describes the C-terminal domain, also called HelicC.	6.36529e-07
NZ_CP046774.1\|WP_158174272.1\|16459_17377_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	8.24012e-30
NZ_CP046774.1\|WP_158174273.1\|17823_19269_-\|hypothetical-protein	gnl\|CDD\|376185	pfam18763, ddrB-ParB, ddrB-like ParB superfamily domain. A member of the ParB/sulfiredoxin superfamily of proteins found in polyvalent proteins prototyped by the version in the phage P1 ddRB protein. These proteins are predicted to function as nucleases.	2.08183e-49
NZ_CP046774.1\|WP_158174275.1\|20303_25097_-\|hypothetical-protein	gnl\|CDD\|376207	pfam18788, DarA_N, Defence against restriction A N-terminal. This is an alpha and beta fold domain. It has a conserved aspartate, and an asparagine residue followed by a basic residue in a Nx+ motif. This predicted structural domain is mainly found in polyvalent proteins of phages/prophages. The P1 hdf protein, a solo version of the domain, and the Phage P1 DarA protein that contains this domain are components of the phage P1 head. The domain might be involved in a counter-restriction activity.	8.25424e-17
NZ_CP046774.1\|WP_136976912.1\|25712_26126_-\|hypothetical-protein	gnl\|CDD\|292702	pfam16084, LydB, LydA-holin antagonist. LydB is a family of proteins that are antagonistic to the lysing action of holin LydA.	9.26865e-14
NZ_CP046774.1\|WP_017634061.1\|15689_16463_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	3.69354e-40

>NZ_CP046774.1|WP_054579116.1|14488_14914_+|hypothetical-protein
MITQVKLPTVEDLQPLLDEALETAQSKEAFIQAQVDGIYKTLKANPLMYRHYGAYWWAVKSLMAKHGYDLGSDSEVITEQHFNFEDPAILLCAAWAYQQEQVDKGYWQANLHTYYVDDEEFEYSIEDVNLEAWSVNSKSMR
>NZ_CP046774.1|WP_158174271.1|7713_14433_+|N-6-DNA-methylase
MNTDLTRSIEQATTIDELVRQFEALLAVDISDTPKGHQRLKANQLAKDILAKYNGDYSNVSPEDKAALRDYTGFGGIGGSTNEYYTPKWLASATWDAVRSYGFTGGSVLEPSSGVGVFSETKPKGTLTTSVEMDQTSAAINQILHPEDHVIQSAFEAVATNPGIGDFDLVIGNPPYGVRDASAMKDKAYKDIKYADQYFVSRSIDKAKAGGLIALVLPTRICDAKNLEKWRTQLALKAEFLGAHRLPTGTFADTGVVTDLVIWRKHSDQAKALIDSADRDTLIESNVLWDTWLKGKWFEREGKKFINGEQTVEGVGKFARKVVKRGNRSNDDIKESLMRRFDSRIDWMLLDEAVSEPVSAKYSDGDTIFRNDQQYEMIDGEWELSESNAKTGVIIKATYGVDNTDEIGSITYSTESMLKLSASQALKLFEDYGYLCHDDFKALMREIAKLPKASQEHAYKGILLGMKVQTLATLVAGSRTTSNSDLANMAMGAEDFQTEQYRVKLSGEVLELNALMGGSKVSKKALSNLSEKYVSAWNYYHSSIDSKGKLSDLLKGDLKRELTVQYSSSRIGDVFHLCDRELGITTLTLHDVRTYYTASGIDAMSDEQLLDYLANMDEVAVNPDGTVTAFHKATTGLVGKRMDQLTAQLVSTTSDTVKANIMRQIQAIESKRNKISIADVKMKLTDKWIPKNIMLEFLHDRGYTEFILGDFTEDKDGFEDFVQSESGQYLTGYRWRDGEWIDGLTRNGVKGKAANSDERFERQIESYINYGAVRGGSKNEDKSLIREQMRRLDDEFSTWIASSDHSEYLEQVYNNTFNGWIKPEFDDSPLTLNGVSGAIEFLPYQNSTIRRHSADGNGIIAFGTGLGKTLTGLGLVQHNLETKRANRVAIVVPKSVLENWFYESDLFFGQSNLSDKVFIGLEVHKDDDGKIIREPVLDETGEPKLDKKGDPILRAKLTVDTNGKRVAEQLHQLTQSTARIVVMTKDVYNRIPLKPGTISANVLEMRDAGLIAGSSKLVKEAESHTEQAKNARFEAKYADDGTAKNEELPYFEDLLFDSVMVDEAHDFRNSYKGGSYRNNLAFLPSQAQADRAIDMQLKNNVIKARNDGRGVYFLTATPTVNSPVDMFNMLSHIIPADTFAKMGIFDSDDFIRMFGKTGEALVTKISGEVEQREALLGFQNLDALRNIVNRYMTIEDAKSVGANVHIPDLISQQSVVQMNGEQEALYEELRQRADAISNPDKDENQEIVEQYPNDTVFGLIRKMDKVSTDLDLYYERVTYRFAKDNKKEVEAAVAKLPNTVTVAFEDVAPDGTVKLSKIQVKVDKSVKVEGDHCVVQLHQQLDDRFTNICDKAKLKFTHPVSPKYAKFLENAREIYLAGGKQLVFTEEKTQHKKVARIIADFVGCKMSEIGILNSDTVAGKKGSKATEDDEEAGLEAMANAYNTSKYKFMILNKKGEVGINLHHGTTDIHHLTLPWTPMSITQRNGRGARVGSKQNSVNVHYYTSKGSFDDFRLATIQRKATWIETMFKGDEKYIANADADAADETAIMLAANPEEAKARIEAAKRQAERKRKLEERRLASINVSKYIKATQMLALDVSAVEGELAELREKLEPLRKEVEEDRLRAEGEKRGSWQHKNYQRTKGRLFALESQIKTYEAAIKNRDKASDTIKKLKPAMELAINDGVLKDYPDFLTHPELYIVRNGVIVRNGYTYKAEVKSRSWSAEYDSKATIMITNFDRKSGTVDGFITEMDGEPASRNYVDLPVERIIEIAPVNQDRAALEAKALQGVPLSEVAHTFDRETFFELVAEKKMKAYGNSRRCLVRNADGSFSTPWGLDVEPDQTLIYPDASDKAIVKALLDQVTKQLEDKGRVMLEHDILSFFIGSDWDKQAMENGNQVSEQEVVELVTLEIKAFEEKYPELYQEALLKAETTYKTSITFLKELDNHLSNLKWTGYTNAHEARRLSAREFTRYTDILTERSSEYRTELEDKLFADFTKLVANDPDRAKRLSQIAYWMTQYKPTTDTHLLKKVDAIYGENSQETMLKVCADLHAIGEREFLSGDGLIFSDDWSLNRMKGAYGSLFTYRSAQREEFIEKYLNADKPEKAEVKVTETQKVKIDNISAINVESIEKFSELMSGIGIDVKMVTSPISWKPKRGRNRKEIVVEPYERIGLMDNNGLKGSLKVMFAGDKEAKAEYGADFASNASSEFNGGWWFISAKADLELLAKSLLTIHNTMAEAA
>NZ_CP046774.1|WP_158174270.1|5658_7332_-|phage-portal-protein
MSQKKASIGLAAALKQAFPFFNENDDKESGISFESGAGYTGSPFHDREHQLDESNGALTNDGRKSSDRFFLHKLPKDRFMLYPILKEMAEDSTIDAALNLHLGHALSVSNDNGMAVYLHPTDEKYAEYVGRLNRELLTPINENLMNWTYSTLVYGVNYVRPYTKEGVGITHFEANYYTLPNQIREYERSGELAGFTAEYLQTRANGEQVRLAEPWALIPLKMPIWRPDMDIPPVNYTGQRYSLYDDAYSRMPIETQNYGTSILLTCFEAWSMLRQSIAALGASRVNASLIDRMVAVNTDGLDAAGAAEYINMVADQMKQDRQEVVDRSRKLGFIPTVINTLLPFMGGAKGGLQIDTFTTDPNISHIEDIMFHLKRLAGTLGVDPSMLGFGDLLSGGLGEGGFFRTSIQSALRANQIRAAVVTFVKRAIDIHTIYRDGKVWNDNDMPFEIRFNSLNTAIEQEKADAMESQANYATMLATVLDLIEQSPIGKSEKLKNHLYTSVIGLDSELAKEVISELAAQVSKNDKMMESIGMTDQSEAERFVRDVVLDLLTEIQSH
>NZ_CP046774.1|WP_158174269.1|4691_5645_-|head-processing-protein
MTAKALKQVSDRFSLFNDGRKLSANKRNYIIKAVQAMINSPRTQELLRLGEAYGYYGHQSRQRANKLSIGETEVIMINGRPVVVENVPSNRTVSITCSDDGIVEHTQEFLDTDTGRIALGLHNSRAGGWSWATGGQDTREASITTSYHGMDYVLQPNYISLDHPAMMMESANSKQMILESLQEQGFDEESARNIYANMTQQTNIELLGDLTNQLMYLESVNAELREQVEQNAKATSMLLDVVDSLPIYVTDAQRKAIANLATQEDHQVVRAMFESLGSRKMATLPTNSYVPVEQKVSVAPQIKQQFVNFGSSSRKFQ
>NZ_CP046774.1|WP_158174268.1|4246_4600_+|hypothetical-protein
MKFTPPPSAEQQLETQVNQLKQQFKRRQFPKKNAPALPLDLLVTISGCTFGLHSQKDGRLVLKADKAINFDKGVNVLRSVSYIAGARDSVSIAGWDWRPMHFKKDKLYLRPVAPSDL
>NZ_CP046774.1|WP_158174267.1|3189_3705_-|hypothetical-protein
MQITPLLLNPRYWKSGFRTQASNIKANKPLAQRKLACLLETISSFILKHGHTCFASSDTLMRTYNENCHRYGCQPITKRTVDTYISDAVDLHLIDRKSFQNRETGQNQRHITLCVDGIKNMFAGVYKYALQAAEKFCNRQKLHLGGLLWKNLLRSVLTRLASNQTKTKIAL
>NZ_CP046774.1|WP_158174266.1|2788_3262_-|hypothetical-protein
MEKPLEVSADKACEQSDKNENCTINTKDLSTESKNKINNGIPSDSWFLKIFKRDADEVKQLQLAAKQGRLSASGARRVIKLYNKHQQPLAPKFVSYLKFVIANWHNKAASAVKASVNKVRDTATMLAEYMNTISEKESQGLVEYYRDAVGRVQVRYL
>NZ_CP046774.1|WP_140203117.1|1622_2699_-|RepB-family-plasmid-replication-initiator-protein
MSDEEYFYPAVSDNLPKHIKKGHQLVFSRQDLSAREADMFALMIAHMKPSDWEQKTPHYEFTSHQLSEWLGVESKHIGSNLSPVANRLASRKIGIKVETPKGDIEFDYRPLFKHIAYKHGILTMVPNDMLKPEYIEYNQGFALINTRNFFEVKKEYSKRLYELLSRFKDKGFEMHAQKLSELKGIFGLLDESGKLKKDKSSFKNNSVFMKRCIRESIKELSEHPQISKELLFLESSQGDKGFEVVKKGRTITGIKFLFRWVKLGSIDELNQHDALKTIRQLELKRLQNQVRLTESELESLAIAYRYVGKEDHALKVEASLSKRHLEKEQQKHDDGMHELESLMEKIDTLSELTDTHDY
>NZ_CP046774.1|WP_017634062.1|15446_15686_+|hypothetical-protein
MASKERCERLNQLVQKAGSTRKAKQLIDGVKGVSPCHTAIYKAMHGGGTTDYVVQCYIEDLEVALSKPKQQTNSTSKGN
>NZ_CP046774.1|WP_017634061.1|15689_16463_+|ParA-family-protein
MSIIMAIANQKGGVGKTTCTYNFGISIASQGNKCLFLDFDPQNNLGGSIAPEMVENPEYTSASCLHNAYNLFENPVKAKPFEVSENVHVIGGDKRMGNITQSQILNVAESIDLIKDDYDYIFIDCPPAANALQHAALLVASKLLIISQAQKMSIKGVNELVKTSRQIRRMNPDLEVLGIVLNLIEANITNDQREQEAELRKEYGNLVFENKLIKTTRVSEALNQGKALIETNPKAAEKFGFTAVCEELCKRMVEVTA
>NZ_CP046774.1|WP_158174272.1|16459_17377_+|ParB/RepB/Spo0J-family-partition-protein
MTKSLRDRIKLSDLDNLLDESAVEIRDAAKVLAIPKDSLYSVEQVREEFNDESLLELCESLEENGQIQPVVVYPFDGKGYKIQEGERRWRAAMLSDKLTHVECIVREKGDIFGQLIENIQREDLTPIELGKAFDQAKKKHNLDNRGLAKRLGKSDGYISKYLNVLKAPDFVLEAFQKGIIGDVESINELRKATVDNSERVREALESGEKLTRQDCVKLRTGELDSKVEVAPQPSKPEKAEKTDKTPVSKKPTANQKPTSICVMVNDRHGLVFASGKHSDKLTVLFDDGELEQVPVGEAQLVGYRV
>NZ_CP046774.1|WP_079878982.1|17398_17731_-|hypothetical-protein
MFTIRHRYHYGLIDINEDGVADGHSVAGNEIPALRKDGEYIYRPFKGALDNIYLLHVQKVKLVNIVAYCDDELGLFGWQDVPLDHYVVGVYRDGGYYVLTKNGQLISHPL
>NZ_CP046774.1|WP_158174273.1|17823_19269_-|hypothetical-protein
MRKLANPTGAVKLNQLTSISAEIKEAKNINDLAEIVQLYATDNPKPKLGRTSYVVTAKGDEVETGFKVVEASDLIPSNDLDGRINPNFPQELQPRDRTRVSSKLQISKMANDLRPQQLTDSGLSSHGAPIVGSDNVVESGNGRTIAIIKAYREGKADKYRQFLIDNAERFDLSPEKVESMREPVLVRERVTKVNRAKFARDSNLSDLQQMSAAETAWVDAERIDDRMIALFQPSETGNLLAKSNQGFINSFLTEIGDNSTAGLLTEDGRPTKQLIERMQNAVFAKAYKNEKLVKLVAEEADPEIRNILSALNGAASAFVEMQYLSGEVHKNTSGTLAEAVEINASQPDLAKSALDSLVQATELVRQAKDSGQHIDELLAQSGLFGDNDPEAGALARFIAANNRSAKRMTLAFKAMAEAINSELLHQGQALGDMFGGGGASLIDILGRVNQELENEGVQTGFMFESSVQLDELANASRHAIK
>NZ_CP046774.1|WP_158174274.1|19551_20235_-|hypothetical-protein
MTLNRDAAGLLKELKSGQLSIGERIKKNRELVEILNKLTGANQKVEQEPVSSSDEPISVEEFSKLGRSDKIEKLNEVLLLPNWYEYEMAFFPNYQMVEKGDNYVVYKDGENFQFGFKGHIARGLDYWKNDAGSAKKNGGFGSWSRADRSKAIKIITKHIEQNERDNGERPVEQSELVARFLAGEFNTAKPSLFVDVMRDVHSEGLELDSIKQKAIEWFEHNPDKLAA
>NZ_CP046774.1|WP_158174275.1|20303_25097_-|hypothetical-protein
MMFTSQNQIKIVDRIDHLAKKLTPEQIEAVLQGKNADQILEALSLEDLENTYLYQCKPVPQMMLEAFKSKASRLEFRAQQFGKHLERKTPTLSVEAVEVGKPRKSGAVAVQMVKIPFSDGQSISIAFHAPDNDPLKINPDDTLIAFRFLMNSRDITHVVAPKGNMDLSLKEVTNKLAQLLENNSEKFVAAKAKKDADKKALEEAQQKAQELDEQAAQLGEEATDLEQKLDELAKKEKRLETQIATQNEIQEELRKQLAAIKPAANTATKNVNAGGSSSQVIEQWDASWTKQEKRDFIINRAFNGDLDAFVKQLSQEFKDSLEFAGAANQNVPSTYSESYINDVIYDLDKGAMTVSELAEAKEYIRDSIENDFPQLSDEERERKANIERKEWLLALIGRKTIAKGWKMDKGEDSEPFVYFESPDANDDDSFGQYMIHARDNQTLAVTYGEGSPLVGGDDLQGWEAVKSLILADYDRESKLLQDTDDSNEEPQPIENDEPNTNDQDKDETTDNLFWYGLRLRPYGLGTTPPQHQVAKYLDPESAKEQFADAGNGIRHGAIAYDQKLPLELVSNFDLEPLFGMVEGDLEEAERIATEALDQWVEDKGVDEIPQSTLDTLKQVGFKAAFAKQLRQQPEMKNRKENPNAYKLWSASIDLVTPDMIQEIAEDLMLVQSDAELQRQAEHTQGRMRFQEAALSQLKDMQSVNPSDRKRLVMLADLTLGTGKTLKRGEKVDDQAKRISEQAHLVESLQGETLASLEAQFKNRKEITDFLTAHRIPFNRRAKRADLLQAILNYRDGFFSATAKMFDLRALRGDLYEKFENGEALALDDVEKAFSATTVYHEGDVAYTKTKGETVIPAMADQGEDYQKVERFIKAIDDGIYPDLSELSSDELFAQHYAMASVTNQDILAIHGFRYLDNDEQIDNEQMARAIHNSVMPLWYTKAIEAEYESRGFPSLAALPDLNHKGQFKATREKRYAPVGTIGQSDFSVIDTYTGKVLETGLEGAAAQQKATQLNDQAVKESTIAIFNMLKDGKTLEQIAETEYSAPLEPVSPAMFTTINGFESLYSTLAINGSGSLHSRPTLRENADKLLAKVDADGKINDIALTEEQENQMENTFGYSFFSAKSNKGKELRFIANTNSRSYLTVDGANKLLELLGAKSAVESDTADEVSKGASEEEKQLLALDPTQYSFGSIYESEGIRDTGEIAKRIRAFIAQLKKAGKISNDVKISVRKPRYGTLDLTLTDLPRNVMLYNPAYLQFEIDNPNSPAPHGMSRYTEAVDQLIEFVNAYVGQYDYNNSDTMTDYHDRNFFGGRLTVDFDFGKERKVVELASLTEMHQQGEQAEDDVLDVTSFRESLDEEEAKALEQLEAFTNLELKLGKQEVTFPTGRVKSINAKDEDGLTYSLDVLFDILATDLSEKAKAQLETIKDWQSADDYYNEKGALVQPSVAAGIHSVNGSVPTNVYAPLIARSWLNESHADIYPIAKDGEYKFALYQGNDLIGEFDDTAEMEALLVKAFNLSSEAPQSETEGNNEEMEHVEKLKEIRDFTGEPTPELVDEFQTALEQAYAHFEANDQIAENEALMDAALSNITSMIQAQI
>NZ_CP046774.1|WP_017634054.1|25093_25720_-|hypothetical-protein
MRNNSKFALDQSHNYVVVDFDNVTERGLKSLITALKQAGATVTDVEASNKRTRRDGETVKRAKLFFDNGQSMTLFIGDEGDIFQMTLNSTKQPIPSVKNERELAREMVRLMKRNQSKFDKQVARKAAKAVKDTSDIQPATRSVAKRLEEAKAAEQVAQSNYTNALAARDSVRTKLEEEQRRIADLETALEQEKQETKELEAQLEAAKS
>NZ_CP046774.1|WP_136976912.1|25712_26126_-|hypothetical-protein
MMEFAVIGLAIADRFLLKRNAVKILHANQMDDPDVIRFVLGYQSQRAITSGTLTYSLRSKKRPKAVITRTRKLDFSHAGHNSEYLTFDRKLLELEAGEKLHGEWILDVKIERSCSLINPLYKIFPTCTTYSEEFEIA
>NZ_CP046774.1|WP_017634052.1|26122_26446_-|hypothetical-protein
MPVSVVGESFAISVLALSVLSGVGSYLQGIREQRLAGGFLDFLTELTLALVVGLIVAYLCESEGVEAGYTSALVLIASNNGADSINFIRKLASQMLARFFNTGGQGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046774_1	1.1\|14937\|53\|NZ_CP046774\|CRISPRCasFinder	14937-14989	53	NZ_CP013486	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence	54146-54198	0	1.0
NZ_CP046774_1	1.1\|14937\|53\|NZ_CP046774\|CRISPRCasFinder	14937-14989	53	NZ_CP046774	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence	14937-14989	0	1.0
NZ_CP046774_2	2.1\|15300\|24\|NZ_CP046774\|CRISPRCasFinder	15300-15323	24	NZ_CP046774	Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence	15300-15323	0	1.0
NZ_CP046774_2	2.1\|15300\|24\|NZ_CP046774\|CRISPRCasFinder	15300-15323	24	NZ_CP014093	Vibrio diabolicus strain FDAARGOS_96 plasmid unnamed, complete sequence	18522-18545	1	0.958
NZ_CP046774_2	2.1\|15300\|24\|NZ_CP046774\|CRISPRCasFinder	15300-15323	24	NZ_CP013486	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence	54550-54573	2	0.917
NZ_CP046774_2	2.1\|15300\|24\|NZ_CP046774\|CRISPRCasFinder	15300-15323	24	NZ_CP046807	Vibrio alginolyticus strain 2439-01 plasmid unnamed1, complete sequence	135335-135358	2	0.917

1. spacer 1.1|14937|53|NZ_CP046774|CRISPRCasFinder matches to NZ_CP013486 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence) position: , mismatch: 0, identity: 1.0

tctcatatgcccgtcatttttggcgggtatttttttgcatggaatttggtaag	CRISPR spacer
tctcatatgcccgtcatttttggcgggtatttttttgcatggaatttggtaag	Protospacer
*****************************************************

2. spacer 1.1|14937|53|NZ_CP046774|CRISPRCasFinder matches to NZ_CP046774 (Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tctcatatgcccgtcatttttggcgggtatttttttgcatggaatttggtaag	CRISPR spacer
tctcatatgcccgtcatttttggcgggtatttttttgcatggaatttggtaag	Protospacer
*****************************************************

3. spacer 2.1|15300|24|NZ_CP046774|CRISPRCasFinder matches to NZ_CP046774 (Vibrio alginolyticus strain 2014V-1011 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggaatcaacctcacaatttatcta	CRISPR spacer
ggaatcaacctcacaatttatcta	Protospacer
************************

4. spacer 2.1|15300|24|NZ_CP046774|CRISPRCasFinder matches to NZ_CP014093 (Vibrio diabolicus strain FDAARGOS_96 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

ggaatcaacctcacaatttatcta	CRISPR spacer
ggaatcaatctcacaatttatcta	Protospacer
********.***************

5. spacer 2.1|15300|24|NZ_CP046774|CRISPRCasFinder matches to NZ_CP013486 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL128, complete sequence) position: , mismatch: 2, identity: 0.917

ggaatcaacctcacaatttatcta	CRISPR spacer
ggaatcaatctcacaatttatctg	Protospacer
********.**************.

6. spacer 2.1|15300|24|NZ_CP046774|CRISPRCasFinder matches to NZ_CP046807 (Vibrio alginolyticus strain 2439-01 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.917

ggaatcaacctcacaatttatcta	CRISPR spacer
ggaatcaatctcacaatttatctg	Protospacer
********.**************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

16459 : 55207

Escherichia_phage(53.85%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158174272.1\|16459_17377_+	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	3.3e-08	30.4
WP_079878982.1\|17398_17731_-	hypothetical protein	NA	NA	NA	NA
WP_158174273.1\|17823_19269_-	hypothetical protein	Q71TE6	Escherichia_phage	1.6e-145	59.8
WP_158174274.1\|19551_20235_-	hypothetical protein	NA	NA	NA	NA
WP_158174275.1\|20303_25097_-	hypothetical protein	Q1MVM7	Enterobacteria_phage	4.0e-20	33.3
WP_017634054.1\|25093_25720_-	hypothetical protein	O21969	Escherichia_phage	6.3e-19	37.3
WP_136976912.1\|25712_26126_-	hypothetical protein	A0A077SK09	Escherichia_phage	9.6e-08	35.8
WP_017634052.1\|26122_26446_-	hypothetical protein	Q37876	Escherichia_phage	4.1e-06	36.4
WP_158174276.1\|26836_29485_-	hypothetical protein	A0A140B3F5	Vibrio_phage	8.5e-57	53.7
WP_136976915.1\|29575_30694_-	hypothetical protein	A0A1B0XUH9	Freshwater_phage	5.6e-18	32.4
WP_158174277.1\|30765_32025_-	hypothetical protein	X2L0B8	Vibrio_phage	3.3e-06	46.3
WP_033905433.1\|32024_32486_-	hypothetical protein	NA	NA	NA	NA
WP_054579128.1\|32542_33382_-	hypothetical protein	A0A1B0V7F2	Salmonella_phage	1.5e-36	40.3
WP_158174278.1\|33497_34895_-	hypothetical protein	A0A1B0VAD6	Salmonella_phage	5.9e-73	35.0
WP_033905435.1\|34891_35239_-	hypothetical protein	NA	NA	NA	NA
WP_158174279.1\|35242_37900_-	hypothetical protein	A0A222YXR4	Escherichia_phage	2.3e-09	35.7
WP_158174280.1\|38028_38841_-	hypothetical protein	A0A222YZ63	Escherichia_phage	5.5e-47	38.6
WP_158174281.1\|38840_39356_-	hypothetical protein	A0A222YY05	Escherichia_phage	4.5e-31	41.1
WP_158174358.1\|39367_39616_-	hypothetical protein	Q71TN7	Escherichia_phage	1.3e-12	46.9
WP_158174282.1\|40191_40572_-	hypothetical protein	NA	NA	NA	NA
WP_017634038.1\|40588_40984_-	hypothetical protein	NA	NA	NA	NA
WP_158174283.1\|41040_41709_-	hypothetical protein	NA	NA	NA	NA
WP_017634036.1\|41705_42521_-	hypothetical protein	K4K6E1	Caulobacter_phage	4.2e-23	36.4
WP_017635630.1\|43194_43443_+	hypothetical protein	NA	NA	NA	NA
WP_158174284.1\|43685_45017_+	Fic family protein	A0A1V0E025	Clostridioides_phage	1.6e-24	30.6
WP_017635634.1\|45082_45580_-	hypothetical protein	A0A222YWE4	Escherichia_phage	2.7e-33	45.1
WP_158174285.1\|45593_46202_-	hypothetical protein	Q1MVJ8	Enterobacteria_phage	6.4e-24	34.7
WP_017635636.1\|46211_46880_-	hypothetical protein	A0A222YXT7	Escherichia_phage	4.4e-10	35.3
WP_158174286.1\|46902_48477_-	hypothetical protein	Q71TB2	Escherichia_phage	1.3e-105	41.6
WP_054577210.1\|48469_48901_-	hypothetical protein	NA	NA	NA	NA
WP_158174287.1\|48947_50597_-	hypothetical protein	A0A222YWC7	Escherichia_phage	2.0e-64	32.0
WP_017635640.1\|50879_51230_-	hypothetical protein	NA	NA	NA	NA
WP_158174288.1\|51229_51781_-	hypothetical protein	A0A2I7RXW8	Vibrio_phage	4.6e-29	44.5
WP_158174289.1\|52014_52194_-	hypothetical protein	NA	NA	NA	NA
WP_158174290.1\|52406_53162_-	hypothetical protein	NA	NA	NA	NA
WP_042522745.1\|53171_53456_-	hypothetical protein	Q1MVI7	Enterobacteria_phage	1.2e-06	34.4
WP_140203490.1\|53462_54233_-	hypothetical protein	A0A222YWF1	Escherichia_phage	2.1e-19	37.7
WP_158174291.1\|54229_55207_-	hypothetical protein	A0A222YXZ0	Escherichia_phage	1.2e-32	28.2

DBSCAN-SWA_2

82524 : 90209

Escherichia_phage(66.67%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158174306.1\|82524_84087_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.9e-20	38.9
WP_158174307.1\|84474_85974_+	EAL domain-containing protein	NA	NA	NA	NA
WP_158174308.1\|86210_86723_-	hypothetical protein	A0A222YXU3	Escherichia_phage	4.8e-33	44.5
WP_158174309.1\|86719_87871_-\|tail	phage tail protein	Q71T88	Escherichia_phage	8.2e-73	49.2
WP_158174310.1\|87874_88198_-\|plate	baseplate protein	NA	NA	NA	NA
WP_158174311.1\|88190_88823_-	hypothetical protein	A0A222YZ79	Escherichia_phage	4.9e-19	30.1
WP_158174312.1\|88912_89197_-	recombination enhancement function domain protein	A0A222YXV2	Escherichia_phage	9.9e-12	47.8
WP_158174313.1\|89675_90209_-	hypothetical protein	K7R9C0	Vibrio_phage	1.2e-10	34.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP046773

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

85313 : 131506

Escherichia_phage(30.0%)

transposase,integrase

attL 124961:125020|attR 131609:131705

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000543934.1\|85313_86324_+\|integrase	tyrosine-type recombinase/integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
WP_000997323.1\|86328_87198_+	3'-5' exonuclease	A0A1S6L012	Salmonella_phage	3.5e-23	35.1
WP_000139717.1\|87194_87686_+	hypothetical protein	NA	NA	NA	NA
WP_001097010.1\|88012_88888_+	DNA replication terminus site-binding protein	NA	NA	NA	NA
WP_000101568.1\|89040_90081_+	DNA-binding protein	NA	NA	NA	NA
WP_000101263.1\|90080_90359_+	hypothetical protein	NA	NA	NA	NA
WP_000811656.1\|90367_91879_+	ATP-dependent helicase	A0A2D1GN12	Pseudoalteromonas_phage	3.6e-44	30.7
WP_001326396.1\|91989_93030_+	conjugal transfer protein TraF	NA	NA	NA	NA
WP_024126941.1\|93031_94465_+	conjugal transfer pilus assembly protein TraH	NA	NA	NA	NA
WP_000534551.1\|94477_98092_+	conjugal transfer protein TraG	NA	NA	NA	NA
WP_000683483.1\|98129_98492_-	hypothetical protein	NA	NA	NA	NA
WP_000356489.1\|99207_99480_+	nucleotide excision repair protein	A0A2H4J3B6	uncultured_Caudovirales_phage	1.3e-08	41.0
WP_000790610.1\|99479_100013_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_000891157.1\|100023_100632_+	hypothetical protein	NA	NA	NA	NA
WP_001020646.1\|100628_101180_+	hypothetical protein	NA	NA	NA	NA
WP_000651490.1\|101239_101659_-	H-NS histone family protein	NA	NA	NA	NA
WP_000919078.1\|101660_101954_-	hypothetical protein	NA	NA	NA	NA
WP_000077458.1\|101970_102954_-	ParM/StbA family protein	A7KUY1	Bacillus_phage	2.1e-08	24.4
WP_000375812.1\|103425_103992_+	hypothetical protein	NA	NA	NA	NA
WP_000127321.1\|103996_104284_+	hypothetical protein	NA	NA	NA	NA
WP_000350011.1\|104268_105369_+	plasmid replication protein	NA	NA	NA	NA
WP_000883925.1\|106405_106840_-	hypothetical protein	NA	NA	NA	NA
WP_000946102.1\|106857_107973_-	phosphoadenosine phosphosulfate reductase family protein	H7BVI4	unidentified_phage	6.4e-46	29.1
WP_000849071.1\|108241_108850_+	hypothetical protein	NA	NA	NA	NA
WP_000393785.1\|108854_109376_+	hypothetical protein	NA	NA	NA	NA
WP_000805800.1\|109378_109900_+	hypothetical protein	NA	NA	NA	NA
WP_001326180.1\|110026_110470_+	hypothetical protein	NA	NA	NA	NA
WP_000902149.1\|110459_110774_+	hypothetical protein	NA	NA	NA	NA
WP_000539392.1\|110778_111633_+	hypothetical protein	NA	NA	NA	NA
WP_001326179.1\|111614_112592_+	S49 family peptidase	Q9JMP1	Wolbachia_phage	7.1e-17	31.5
WP_000139698.1\|112607_113468_+	DsbA family protein	NA	NA	NA	NA
WP_000591074.1\|113501_113930_+	hypothetical protein	NA	NA	NA	NA
WP_000422768.1\|113986_114346_+	hypothetical protein	A0A076G835	Escherichia_phage	5.6e-20	49.4
WP_000919345.1\|114345_114792_+	Fe3+-siderophore ABC transporter permease	NA	NA	NA	NA
WP_000210756.1\|114788_115307_+	nitrite reductase	NA	NA	NA	NA
WP_000972663.1\|115306_115537_+	hypothetical protein	NA	NA	NA	NA
WP_001167032.1\|115523_116381_+	hypothetical protein	NA	NA	NA	NA
WP_001236377.1\|116611_117139_+	thermonuclease family protein	O64020	Bacillus_phage	1.3e-09	37.0
WP_001043047.1\|117196_117469_+	HU family DNA-binding protein	A3E2K9	Sodalis_phage	4.2e-20	59.6
WP_001239997.1\|117556_117850_+	chromosome segregation protein ParM	NA	NA	NA	NA
WP_000124640.1\|117876_118179_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000270043.1\|118183_118534_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_001061574.1\|118696_119245_+	transcriptional regulator	NA	NA	NA	NA
WP_000343597.1\|119585_119780_+	hypothetical protein	NA	NA	NA	NA
WP_000516916.1\|119790_120162_+	hypothetical protein	NA	NA	NA	NA
WP_001281821.1\|120154_120625_+	hypothetical protein	NA	NA	NA	NA
WP_001326176.1\|120639_120981_-	hypothetical protein	NA	NA	NA	NA
WP_000286591.1\|121098_121560_+	DUF1643 domain-containing protein	B5WZV8	Pseudomonas_phage	1.5e-46	60.5
WP_000062185.1\|121562_122060_+	hypothetical protein	NA	NA	NA	NA
WP_001067834.1\|122325_123030_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	3.1e-139	99.6
WP_000018329.1\|123219_124035_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|124185_124890_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
124961:125020	attL	NA	NA	NA	NA
WP_004152787.1\|125263_125404_+	hypothetical protein	NA	NA	NA	NA
WP_000376623.1\|125386_125887_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|126014_126854_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|126847_127195_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001355915.1\|127395_127869_-	trimethoprim-resistant dihydrofolate reductase DfrA15	G3MBI7	Bacillus_virus	6.9e-18	30.8
WP_000845048.1\|128025_129039_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001067855.1\|129575_130280_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001389365.1\|130420_131185_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001375131.1\|131248_131506_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A077SL39	Escherichia_phage	8.9e-12	61.9
131609:131705	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046772

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP046774

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP046773

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection