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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046760 Vibrio parahaemolyticus strain AM51552 chromosome 1, complete sequence 0 crisprs DEDDh,DinG,cas3,csx1,RT,csa3 0 0 5 0
NZ_CP046759 Vibrio parahaemolyticus strain AM51552 chromosome 2, complete sequence 1 crisprs WYL,cas3,csa3,DEDDh 0 0 147 0

Results visualization

1. NZ_CP046760
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 383304 : 400476 14 uncultured_Mediterranean_phage(20.0%) tRNA NA
DBSCAN-SWA_2 1120378 : 1162542 51 Bluetongue_virus(36.36%) transposase,tRNA,integrase attL 1124416:1124430|attR 1148123:1148137
DBSCAN-SWA_3 1395965 : 1404556 12 Vibrio_phage(90.91%) NA NA
DBSCAN-SWA_4 1650227 : 1664095 17 Vibrio_phage(45.45%) NA NA
DBSCAN-SWA_5 2365738 : 2372440 7 Staphylococcus_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP046759
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046759_1 783990-784087 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 11601 10 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_2 28460 : 29369 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_3 37978 : 43294 3 Escherichia_phage(50.0%) integrase attL 25107:25122|attR 49827:49842
DBSCAN-SWA_4 48196 : 51141 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_5 99243 : 99423 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_6 107464 : 109849 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_7 114103 : 121660 6 Ectocarpus_siliculosus_virus(33.33%) NA NA
DBSCAN-SWA_8 132665 : 135079 3 Catovirus(50.0%) NA NA
DBSCAN-SWA_9 140781 : 144793 3 Sulfolobus_monocaudavirus(50.0%) NA NA
DBSCAN-SWA_10 148253 : 151658 2 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_11 155015 : 161742 4 Hokovirus(50.0%) NA NA
DBSCAN-SWA_12 181849 : 182101 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_13 186258 : 188895 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_14 202835 : 207344 6 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_15 211847 : 213233 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_16 221733 : 223470 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_17 231307 : 245548 11 Pike_perch_iridovirus(16.67%) NA NA
DBSCAN-SWA_18 255049 : 258307 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_19 265112 : 266405 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_20 271708 : 279769 9 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_21 290242 : 295007 4 Clostridium_phage(33.33%) NA NA
DBSCAN-SWA_22 298364 : 302525 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_23 311355 : 316178 3 Flavobacterium_phage(50.0%) NA NA
DBSCAN-SWA_24 324382 : 324997 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_25 328345 : 331502 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_26 335921 : 337793 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_27 355424 : 359228 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_28 375904 : 378126 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_29 387294 : 391230 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_30 404593 : 405064 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_31 410348 : 412253 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_32 424161 : 431588 10 Proteus_phage(25.0%) NA NA
DBSCAN-SWA_33 438861 : 439644 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_34 445627 : 446458 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_35 465450 : 467034 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_36 474085 : 475144 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_37 480432 : 490043 8 Brazilian_cedratvirus(33.33%) tRNA NA
DBSCAN-SWA_38 499244 : 500261 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_39 504523 : 506143 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_40 510772 : 511792 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_41 517339 : 520498 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_42 532007 : 534032 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 540877 : 541762 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_44 545207 : 550458 5 Agrobacterium_phage(50.0%) NA NA
DBSCAN-SWA_45 561317 : 569304 9 Burkholderia_virus(20.0%) NA NA
DBSCAN-SWA_46 588520 : 590285 2 Halocynthia_phage(50.0%) NA NA
DBSCAN-SWA_47 599436 : 600414 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_48 608850 : 609969 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_49 619456 : 621490 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_50 624734 : 626699 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_51 634760 : 635447 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_52 644847 : 649771 4 Bacillus_thuringiensis_phage(25.0%) NA NA
DBSCAN-SWA_53 654690 : 656789 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_54 681528 : 682419 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_55 687304 : 696269 7 Chrysochromulina_ericina_virus(25.0%) NA NA
DBSCAN-SWA_56 707612 : 713469 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_57 725855 : 726614 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_58 731528 : 736620 4 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_59 740373 : 743064 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 748738 : 755631 9 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_61 767086 : 768265 1 Agrotis_ipsilon_multiple_nucleopolyhedrovirus(100.0%) NA NA
DBSCAN-SWA_62 783128 : 796995 14 Chrysochromulina_ericina_virus(20.0%) NA NA
DBSCAN-SWA_63 801419 : 807077 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_64 814127 : 814610 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_65 824178 : 825036 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_66 830027 : 834942 5 uncultured_Caudovirales_phage(25.0%) NA NA
DBSCAN-SWA_67 838337 : 839036 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_68 842491 : 848972 7 Hokovirus(25.0%) NA NA
DBSCAN-SWA_69 852950 : 861118 6 Enterobacteria_phage(20.0%) NA NA
DBSCAN-SWA_70 871000 : 873115 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_71 881649 : 884020 3 Vibrio_virus(50.0%) NA NA
DBSCAN-SWA_72 891424 : 896775 6 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_73 900263 : 901502 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_74 905742 : 909434 5 Burkholderia_virus(33.33%) NA NA
DBSCAN-SWA_75 912792 : 914361 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_76 924936 : 936656 10 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_77 950275 : 961066 7 Planktothrix_phage(20.0%) NA NA
DBSCAN-SWA_78 969464 : 971081 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_79 987052 : 987349 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_80 994241 : 996695 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_81 1008652 : 1009027 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_82 1021063 : 1022527 1 Apis_mellifera_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_83 1026536 : 1027694 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_84 1049919 : 1054164 3 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_85 1058582 : 1059014 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_86 1083098 : 1084136 1 Neodiprion_lecontei_nucleopolyhedrovirus(100.0%) protease NA
DBSCAN-SWA_87 1093907 : 1096610 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_88 1102091 : 1104482 2 Emiliania_huxleyi_virus(50.0%) NA NA
DBSCAN-SWA_89 1117206 : 1121108 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_90 1124477 : 1126106 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_91 1129309 : 1130080 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_92 1133238 : 1139210 5 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_93 1144428 : 1152102 6 Enterobacteria_phage(25.0%) NA NA
DBSCAN-SWA_94 1158681 : 1166665 6 uncultured_Caudovirales_phage(25.0%) NA NA
DBSCAN-SWA_95 1174055 : 1180628 6 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_96 1202525 : 1209415 5 Bacillus_phage(75.0%) NA NA
DBSCAN-SWA_97 1224637 : 1227081 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_98 1242770 : 1243889 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_99 1259572 : 1261477 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_100 1265354 : 1271711 8 Stx2-converting_phage(25.0%) protease NA
DBSCAN-SWA_101 1282794 : 1285691 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_102 1289027 : 1294175 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_103 1299715 : 1301038 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_104 1309630 : 1312279 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_105 1316529 : 1320874 3 Invertebrate_iridovirus(50.0%) NA NA
DBSCAN-SWA_106 1326032 : 1326656 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_107 1331037 : 1334385 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_108 1348235 : 1350232 2 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_109 1353504 : 1370698 14 uncultured_Caudovirales_phage(16.67%) tRNA NA
DBSCAN-SWA_110 1374787 : 1377724 3 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_111 1383140 : 1384552 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_112 1388416 : 1391549 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_113 1395330 : 1396149 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_114 1401431 : 1402253 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_115 1416272 : 1424421 5 Hokovirus(33.33%) NA NA
DBSCAN-SWA_116 1432319 : 1446407 13 Escherichia_phage(20.0%) holin NA
DBSCAN-SWA_117 1452299 : 1454657 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_118 1458482 : 1459700 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_119 1465824 : 1467171 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_120 1475746 : 1476625 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_121 1494199 : 1505050 11 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_122 1511768 : 1513682 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_123 1525629 : 1526466 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_124 1535629 : 1537774 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_125 1556213 : 1563736 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_126 1567656 : 1569316 3 Leuconostoc_phage(50.0%) NA NA
DBSCAN-SWA_127 1575753 : 1578200 2 Lactobacillus_virus(50.0%) NA NA
DBSCAN-SWA_128 1586042 : 1587674 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_129 1622329 : 1622764 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_130 1627457 : 1628720 1 Archaeal_BJ1_virus(100.0%) NA NA
DBSCAN-SWA_131 1644092 : 1652393 5 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_132 1661261 : 1666316 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_133 1672236 : 1672899 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_134 1688053 : 1691083 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_135 1698027 : 1698720 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_136 1705308 : 1706148 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_137 1717713 : 1718733 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_138 1729960 : 1733897 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_139 1737903 : 1738377 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_140 1742156 : 1746644 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_141 1758592 : 1759327 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_142 1770886 : 1773946 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_143 1779417 : 1784138 3 Aeromonas_phage(50.0%) NA NA
DBSCAN-SWA_144 1798687 : 1801987 3 Clostridium_phage(50.0%) NA NA
DBSCAN-SWA_145 1806932 : 1807439 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_146 1810705 : 1811242 1 Ochrobactrum_phage(100.0%) NA NA
DBSCAN-SWA_147 1817212 : 1819063 1 Pseudomonas_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage