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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046783 Vibrio parahaemolyticus strain 2013V-1181 chromosome 1, complete sequence 0 crisprs cas3,cas5f,cas7f,cas6f,csx1,DinG,DEDDh,csa3 0 0 5 0
NZ_CP046784 Vibrio parahaemolyticus strain 2013V-1181 chromosome 2, complete sequence 2 crisprs csa3,cas3,cas5f,cas7f,cas6f,DEDDh,WYL 0 0 148 0

Results visualization

1. NZ_CP046783
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 121318 : 128020 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_2 875319 : 889330 16 Vibrio_phage(30.0%) NA NA
DBSCAN-SWA_3 1492786 : 1515681 21 Vibrio_phage(82.35%) portal,capsid,terminase NA
DBSCAN-SWA_4 1523497 : 1536441 18 Vibrio_phage(50.0%) integrase attL 1525687:1525701|attR 1536055:1536069
DBSCAN-SWA_5 2234386 : 2251781 14 uncultured_Mediterranean_phage(20.0%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP046784
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046784_1 568099-568226 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046784_2 1090655-1090752 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2023 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_2 5801 : 6275 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_3 10281 : 14218 4 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_4 25459 : 26479 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_5 38043 : 38883 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_6 45447 : 46140 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_7 53084 : 56114 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_8 68080 : 68551 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_9 75222 : 78775 7 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_10 84421 : 85084 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_11 91004 : 96071 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_12 104943 : 113244 5 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_13 128599 : 129862 1 Archaeal_BJ1_virus(100.0%) NA NA
DBSCAN-SWA_14 134554 : 134989 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_15 169630 : 171262 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_16 179087 : 181534 2 Aphanizomenon_phage(50.0%) NA NA
DBSCAN-SWA_17 187969 : 189629 3 Morganella_phage(50.0%) NA NA
DBSCAN-SWA_18 193549 : 201072 6 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_19 219511 : 221656 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_20 230818 : 231655 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_21 243605 : 245519 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_22 252237 : 252906 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_23 266658 : 272901 6 Lactobacillus_phage(33.33%) NA NA
DBSCAN-SWA_24 281402 : 283138 2 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_25 290976 : 305224 11 Pike_perch_iridovirus(16.67%) NA NA
DBSCAN-SWA_26 314726 : 317984 2 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_27 324789 : 326082 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_28 331387 : 339463 9 Chrysochromulina_ericina_virus(33.33%) NA NA
DBSCAN-SWA_29 349939 : 354704 4 Clostridium_phage(33.33%) NA NA
DBSCAN-SWA_30 358061 : 362222 5 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_31 371039 : 375862 3 Flavobacterium_phage(50.0%) NA NA
DBSCAN-SWA_32 384072 : 384687 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_33 388035 : 391192 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_34 395611 : 397483 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_35 415120 : 418924 3 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_36 435588 : 437810 2 Escherichia_phage(50.0%) NA NA
DBSCAN-SWA_37 446975 : 450913 2 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_38 464291 : 464762 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_39 470032 : 471937 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_40 482981 : 483896 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_41 491162 : 491945 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_42 497926 : 498757 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_43 510457 : 511378 1 Vibrio_phage(100.0%) transposase NA
DBSCAN-SWA_44 519665 : 520586 1 Vibrio_phage(100.0%) transposase NA
DBSCAN-SWA_45 530778 : 536407 6 Organic_Lake_phycodnavirus(25.0%) transposase NA
DBSCAN-SWA_46 552389 : 553856 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_47 590039 : 590930 1 Vibrio_phage(100.0%) transposase NA
DBSCAN-SWA_48 600885 : 606162 6 Vibrio_phage(33.33%) transposase NA
DBSCAN-SWA_49 615642 : 616761 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_50 632449 : 634879 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_51 650101 : 656991 5 Bacillus_phage(75.0%) NA NA
DBSCAN-SWA_52 678820 : 685396 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_53 692618 : 700601 6 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_54 707185 : 714881 6 Organic_Lake_phycodnavirus(25.0%) NA NA
DBSCAN-SWA_55 720099 : 726071 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_56 729226 : 729997 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_57 733200 : 734829 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_58 738198 : 739830 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_59 754818 : 757209 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_60 762690 : 765393 3 Salmonella_phage(50.0%) NA NA
DBSCAN-SWA_61 775165 : 776203 1 Neodiprion_lecontei_nucleopolyhedrovirus(100.0%) protease NA
DBSCAN-SWA_62 801875 : 802307 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_63 806725 : 813583 6 Providencia_phage(25.0%) NA NA
DBSCAN-SWA_64 834558 : 835716 1 Stx2-converting_phage(100.0%) NA NA
DBSCAN-SWA_65 839723 : 841187 1 Apis_mellifera_filamentous_virus(100.0%) NA NA
DBSCAN-SWA_66 854322 : 854697 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_67 866648 : 869102 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_68 875995 : 876292 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_69 892276 : 893893 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_70 902304 : 913096 7 Salmonella_phage(20.0%) NA NA
DBSCAN-SWA_71 926715 : 939555 12 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_72 944691 : 946260 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_73 949617 : 953310 5 Salmonella_phage(33.33%) NA NA
DBSCAN-SWA_74 957555 : 958794 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_75 963183 : 968535 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_76 975939 : 978310 3 Bordetella_phage(50.0%) NA NA
DBSCAN-SWA_77 981324 : 982548 1 Ectocarpus_siliculosus_virus(100.0%) NA NA
DBSCAN-SWA_78 986844 : 988959 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_79 1013626 : 1021793 6 Burkholderia_virus(20.0%) tRNA NA
DBSCAN-SWA_80 1025771 : 1032249 7 Planktothrix_phage(25.0%) NA NA
DBSCAN-SWA_81 1035704 : 1036403 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_82 1039798 : 1044714 5 Enterobacteria_phage(25.0%) NA NA
DBSCAN-SWA_83 1049705 : 1050563 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_84 1060130 : 1060613 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_85 1067669 : 1073327 5 Orgyia_leucostigma_nucleopolyhedrovirus(50.0%) NA NA
DBSCAN-SWA_86 1077751 : 1091613 13 Diadromus_pulchellus_ascovirus(20.0%) NA NA
DBSCAN-SWA_87 1106477 : 1107656 1 Agrotis_ipsilon_multiple_nucleopolyhedrovirus(100.0%) NA NA
DBSCAN-SWA_88 1119110 : 1126003 9 Infectious_spleen_and_kidney_necrosis_virus(33.33%) NA NA
DBSCAN-SWA_89 1131677 : 1134367 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_90 1138119 : 1143211 4 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_91 1148124 : 1148883 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_92 1161312 : 1167168 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_93 1178512 : 1187479 7 Staphylococcus_phage(25.0%) NA NA
DBSCAN-SWA_94 1192364 : 1193255 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_95 1219276 : 1231220 9 Pacmanvirus(14.29%) NA NA
DBSCAN-SWA_96 1240620 : 1241307 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_97 1248191 : 1251333 2 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_98 1254577 : 1256611 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_99 1265796 : 1266915 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_100 1276012 : 1276990 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_101 1286139 : 1287905 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_102 1307119 : 1315103 9 Hokovirus(20.0%) NA NA
DBSCAN-SWA_103 1340068 : 1340656 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_104 1344436 : 1345747 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_105 1349193 : 1350078 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_106 1356920 : 1358945 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_107 1370454 : 1373613 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_108 1379161 : 1380181 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_109 1384808 : 1386428 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_110 1390691 : 1391708 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_111 1400908 : 1410519 8 Yersinia_phage(33.33%) tRNA NA
DBSCAN-SWA_112 1414474 : 1416852 3 Trichoplusia_ni_ascovirus(50.0%) NA NA
DBSCAN-SWA_113 1423889 : 1425443 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_114 1448016 : 1454374 10 Stx2-converting_phage(25.0%) protease NA
DBSCAN-SWA_115 1465471 : 1468368 3 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_116 1471703 : 1476851 6 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_117 1482390 : 1483713 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_118 1492311 : 1494960 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_119 1499209 : 1503555 3 Invertebrate_iridovirus(50.0%) NA NA
DBSCAN-SWA_120 1508713 : 1509337 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_121 1513718 : 1517066 4 uncultured_Mediterranean_phage(50.0%) NA NA
DBSCAN-SWA_122 1530919 : 1532916 2 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_123 1536188 : 1553318 14 uncultured_Caudovirales_phage(16.67%) tRNA NA
DBSCAN-SWA_124 1557407 : 1560344 3 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_125 1565759 : 1567171 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_126 1571035 : 1574168 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_127 1577947 : 1578766 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_128 1584048 : 1584870 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_129 1598882 : 1607028 5 Hokovirus(33.33%) NA NA
DBSCAN-SWA_130 1614907 : 1628977 13 Escherichia_phage(20.0%) holin NA
DBSCAN-SWA_131 1634868 : 1637226 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_132 1649360 : 1661622 13 Enterobacteria_phage(28.57%) NA NA
DBSCAN-SWA_133 1665779 : 1666031 1 Salicola_phage(100.0%) NA NA
DBSCAN-SWA_134 1688387 : 1695114 4 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_135 1698481 : 1701885 2 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_136 1705345 : 1709357 3 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_137 1715059 : 1717473 3 Indivirus(50.0%) NA NA
DBSCAN-SWA_138 1728464 : 1736021 6 Lactococcus_phage(33.33%) NA NA
DBSCAN-SWA_139 1746928 : 1747837 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_140 1764702 : 1771487 4 Hokovirus(50.0%) NA NA
DBSCAN-SWA_141 1775995 : 1776970 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_142 1799588 : 1801439 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_143 1807305 : 1810540 4 Ochrobactrum_phage(50.0%) NA NA
DBSCAN-SWA_144 1815475 : 1818054 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_145 1823453 : 1825962 2 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_146 1833416 : 1838137 3 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_147 1843609 : 1846669 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_148 1858201 : 1858936 1 Planktothrix_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage