CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046840	Vibrio cholerae strain F9993 chromosome 1, complete sequence	1 crisprs	DEDDh,csa3,DinG,WYL,cas3,RT,csx1	0	1	6	0
NZ_CP046841	Vibrio cholerae strain F9993 chromosome 2, complete sequence	0 crisprs	csa3,cas3	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046840_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046840_1

1309934-1310177

Orphan

Consensus_repeat	Method
AAAATGTGCCTCCTTAGCTCAGTCGGTAGAGCAACGGACTGATAATCCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP046840_1

>merge|NZ_CP046840|1|1309934-1310177|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAATTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTGTCGGTGGTTCGATTCCGCCTCGAGGCACCACTATTAAAAGTTGTGCCATAGACACAATAAAAATTGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

>NZ_CP046840|1|1|1309934-1310177|PILER-CR
TGTGCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGG	TCGCCAGTTCGATTCCGGCAGCCGGCACCACTTAAAA
TTTGCCTCGATAGCTCAGTCGGTAGAGCAGAGGATTGAAAATCCTCGTG	TCGGTGGTTCGATTCCGCCTCGAGGCACCACTATTAAAAGTTGTGCCATAGACACAATAAAAAT
TGTTCCTCCTTAGCTCAGTCGGTAGAGCGACGGACTGTTAATCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046840.1\|WP_000973535.1\|1321082_1321580_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|365932
NZ_CP046840.1\|WP_001890075.1\|1307126_1308188_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|182805
NZ_CP046840.1\|WP_000095773.1\|1317840_1318833_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP046840.1\|WP_000546924.1\|1313138_1313993_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP046840.1\|WP_000769920.1\|1310466_1312092_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP046840.1\|WP_000780524.1\|1316555_1317851_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP046840.1\|WP_001243262.1\|1318846_1319662_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP046840.1\|WP_000725019.1\|1303144_1303747_+\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|234648
NZ_CP046840.1\|WP_001087263.1\|1301750_1302308_+\|YggT-family-protein	unknown	unknown	gnl\|CDD\|223833
NZ_CP046840.1\|WP_000035032.1\|1320124_1320934_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	unknown	unknown	gnl\|CDD\|234673
NZ_CP046840.1\|WP_001892423.1\|1321592_1322078_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182143
NZ_CP046840.1\|WP_000124738.1\|1308201_1308474_+\|oxidative-damage-protection-protein	unknown	unknown	gnl\|CDD\|180059
NZ_CP046840.1\|WP_000005584.1\|1306167_1306887_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	unknown	unknown	gnl\|CDD\|234649
NZ_CP046840.1\|WP_000383338.1\|1319733_1320114_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP046840.1\|WP_001883271.1\|1314139_1316503_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP046840.1\|WP_000805043.1\|1305136_1306057_-\|glutaminase-B	unknown	unknown	gnl\|CDD\|234880
NZ_CP046840.1\|WP_001233674.1\|1302643_1303075_+\|DUF4426-domain-containing-protein	unknown	unknown	gnl\|CDD\|379616
NZ_CP046840.1\|WP_000718491.1\|1302307_1302598_+\|YggU-family-protein	unknown	unknown	gnl\|CDD\|179931
NZ_CP046840.1\|WP_000957351.1\|1303740_1304916_+\|radical-SAM-family-heme-chaperone-HemW	unknown	unknown	gnl\|CDD\|235550
NZ_CP046840.1\|WP_001230176.1\|1308575_1309703_+\|membrane-bound-lytic-murein-transglycosylase-MltC	unknown	unknown	gnl\|CDD\|183271

Protein	Function_ID	Function_description	E-value
NZ_CP046840.1\|WP_000973535.1\|1321082_1321580_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|365932	pfam00186, DHFR_1, Dihydrofolate reductase.	1.40644e-92
NZ_CP046840.1\|WP_001890075.1\|1307126_1308188_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|182805	PRK10880, PRK10880, adenine DNA glycosylase.	0
NZ_CP046840.1\|WP_000095773.1\|1317840_1318833_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP046840.1\|WP_000546924.1\|1313138_1313993_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	1.60415e-153
NZ_CP046840.1\|WP_000769920.1\|1310466_1312092_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.35326e-58
NZ_CP046840.1\|WP_000780524.1\|1316555_1317851_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	9.94454e-157
NZ_CP046840.1\|WP_001243262.1\|1318846_1319662_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.27746e-146
NZ_CP046840.1\|WP_000725019.1\|1303144_1303747_+\|XTP/dITP-diphosphatase	gnl\|CDD\|234648	PRK00120, PRK00120, dITP/XTP pyrophosphatase; Reviewed.	4.099e-127
NZ_CP046840.1\|WP_001087263.1\|1301750_1302308_+\|YggT-family-protein	gnl\|CDD\|223833	COG0762, COG0762, Predicted integral membrane protein [Function unknown].	1.96316e-12
NZ_CP046840.1\|WP_000035032.1\|1320124_1320934_+\|symmetrical-bis(5'-nucleosyl)-tetraphosphatase	gnl\|CDD\|234673	PRK00166, apaH, symmetrical bis(5'-nucleosyl)-tetraphosphatase.	1.41419e-169
NZ_CP046840.1\|WP_001892423.1\|1321592_1322078_-\|hypothetical-protein	gnl\|CDD\|182143	PRK09917, PRK09917, threonine/serine exporter.	2.57871e-66
NZ_CP046840.1\|WP_000124738.1\|1308201_1308474_+\|oxidative-damage-protection-protein	gnl\|CDD\|180059	PRK05408, PRK05408, oxidative damage protection protein; Provisional.	5.47988e-59
NZ_CP046840.1\|WP_000005584.1\|1306167_1306887_-\|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB	gnl\|CDD\|234649	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed.	6.01203e-111
NZ_CP046840.1\|WP_000383338.1\|1319733_1320114_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	1.16069e-74
NZ_CP046840.1\|WP_001883271.1\|1314139_1316503_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP046840.1\|WP_000805043.1\|1305136_1306057_-\|glutaminase-B	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	0
NZ_CP046840.1\|WP_001233674.1\|1302643_1303075_+\|DUF4426-domain-containing-protein	gnl\|CDD\|379616	pfam14467, DUF4426, Domain of unknown function (DUF4426). Members of this entry are found mostly in g-proteobacteria, especially in Vibrio. Strangely enough, there seems to be one eukaryotic homolog in Nematostella vectensis (NEMVEDRAFT_v1g226006), where the PA0388-like domain is fused with a domain homogous to the Methionine biosynthesis protein MetW (see below). In several Pseudomonas species, but also in Vibrio vulnificus and Azotobacter vinelandii PA0388 homologs are genomic neighbors of Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) and Methionine biosynthesis protein MetW. On the other hand, in most Vibrio species it appears as a part of a conserved operon involved in possible response to stress.	6.80534e-67
NZ_CP046840.1\|WP_000718491.1\|1302307_1302598_+\|YggU-family-protein	gnl\|CDD\|179931	PRK05090, PRK05090, hypothetical protein; Validated.	2.12816e-59
NZ_CP046840.1\|WP_000957351.1\|1303740_1304916_+\|radical-SAM-family-heme-chaperone-HemW	gnl\|CDD\|235550	PRK05660, PRK05660, radical SAM family heme chaperone HemW.	0
NZ_CP046840.1\|WP_001230176.1\|1308575_1309703_+\|membrane-bound-lytic-murein-transglycosylase-MltC	gnl\|CDD\|183271	PRK11671, mltC, membrane-bound lytic murein transglycosylase MltC.	9.42926e-157

>NZ_CP046840.1|WP_001230176.1|1308575_1309703_+|membrane-bound-lytic-murein-transglycosylase-MltC
MRKLVLCITALLLSGCSREFIEKIYDVDYEPTNRFAKNLAELPGQFQKDTAALDALINSFSGNIEKRWGRRELKIAGKNNYVKYIDNYLSRSEVNFTEGRIIVETVSPIDPKAHLRNAIITTLLTPDDPAHVDLFSSKDIELKGQPFLYQQVLDQDGQPIQWSWRANRYADYLIANHLKVKQVDFKKAYYVEIPMVKDQIDIRGYKYASIVRKASRKYDIPEDLIYAIIKTESSFNPYAVSWANAYGLMQVVPKTAGRDVFKLVKNRSGEPSPEYLFNPENNIDTGTAYFYILKNRYLKEVRHPTSLEYSMISAYNGGTGGVLSTFSSDRQRAMRDLNALQPNQVYWALTKKHPNAEARRYLEKVTKFKKEFNAG
>NZ_CP046840.1|WP_000124738.1|1308201_1308474_+|oxidative-damage-protection-protein
MARTVFCTRLQKEADGLDFQLYPGELGKRIFDNICKEAWAQWQTKQTMLINEKKLNMMDPEHRKLLEQEMVNFLFEGKEVHIEGYTPPAK
>NZ_CP046840.1|WP_001890075.1|1307126_1308188_+|A/G-specific-adenine-glycosylase
MTPFAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYFERFLERFPTVHALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGGEFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVEGWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLCPVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQSGIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLDITPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTLPFDIDSHI
>NZ_CP046840.1|WP_000005584.1|1306167_1306887_-|tRNA-(guanosine(46)-N7)-methyltransferase-TrmB
MSEVITQEYTEDGKVLRRIRSFVRREGRLTKGQEAAMKECWPTMGIDYQPELLDWQQVFGNDNPVVLEIGFGMGASLVEMAKNAPEKNFLGIEVHSPGVGACLASAREAGVTNLRVMCHDAVEVFAHMIPDNSLHTLQLFFPDPWHKKRHHKRRIVQLEFAEMVRQKLMIGSGVFHMATDWENYAEHMVEVMNQAPGFANLATDGDYVPRPDERPLTKFEQRGHRLGHGVWDIKYQRTA
>NZ_CP046840.1|WP_000805043.1|1305136_1306057_-|glutaminase-B
MKPTADILASIIEEVRPLTSKGIVADYIPALAKVPSDKLGIAVFTNQGEVITAGDAQEGFSIQSISKVLSLTLAMGLYQPDELWSRVGKEPSGQAFNSLIQLEMEQGIPRNPFINAGAIVVCDMLQSRLSAPRQRLLEFVRQLSGEPQIAYDKVVAASEMMHSDRNAAIAYLMRSFGNFHNEVIPVLHNYFHACALKMSCVELAKTFSYLANKGVSVVTGETVITPTQSKQTNALLATCGLYDGAGEFAYRVGMPGKSGVGGGIIAVVPGEMTIAVWSPALDQSGNSLAGTRALELLAQRIGRSIF
>NZ_CP046840.1|WP_000957351.1|1303740_1304916_+|radical-SAM-family-heme-chaperone-HemW
MLTPPSLSLYIHIPWCVQKCPYCDFNSHAQKGEIPEQEYLDALLQDLDRDIERYQLKGDPRLLHSIFIGGGTPSLISAEGIARLLQGVAERIAFKPEIEITMEANPGTIEAQRFAGYRTAGVTRISIGVQSFEPEKLARLGRIHGQQEAVRAAQLAHQIGLNSFNLDLMHGLPDQTPEQALADLDQAIALNPPHLSWYQLTIEPNTLFYSKPPKLPDEDALWDIFELGHQKLSDAGYVQYEISGYSKPGYQCQHNLNYWRFGDYLGIGCGAHGKLSFADGRIVRTTKTKHPRGYLAALNNLAKAYLDSEQLVADQDKPFEFFMNRFRLIEPCPKADFTATTGLTIDVIRPTLDWALSEGYLSEDDQHWQITEKGKLFLNDLLEAFMADEEE
>NZ_CP046840.1|WP_000725019.1|1303144_1303747_+|XTP/dITP-diphosphatase
MKKIVLATGNQGKVREMADLLSDFGFDVVAQSEFNVPEAAETGTTFIENAIIKARHAAQITGLPTIADDSGLEVDYLNGAPGIYSARYAGEHASDGDNLNKLLMAMQDVPDDQRSARFHCVLVLMRHADDPTPIVCHGKWEGKILTAPHGSNGFGYDPIFWVPEENCASAELEPVRKKQLSHRGKALQKLFKAIEEQRTC
>NZ_CP046840.1|WP_001233674.1|1302643_1303075_+|DUF4426-domain-containing-protein
MRKWMMSLLLTLLALPASAEQQKTIKDIEVHYSAFNSTFLTPKVASSYQLTRNGYTAILNISVLDRASLGKPATEAKLTGHAKNLIGNLRELSFKQVKEGNAIYYLAEVPISNEEMLTFDIDVDAGLKGAGKLTFSQKFYTEQ
>NZ_CP046840.1|WP_000718491.1|1302307_1302598_+|YggU-family-protein
MAAAWREGDDLLLRLYIQPKASRDSIVGLHGEELKVAITAPPIDGKANAHLSKYLAKLCKVAKGSVVVEKGELGRHKQVRILQPSQIPAEIAALIE
>NZ_CP046840.1|WP_001087263.1|1301750_1302308_+|YggT-family-protein
MNSLSFLINTLFDLYIMVVILRIWLQAARADFYNPFSQFIVKATQPVVGPLRRVIPSIGSIDLATIVFAYVLCVLKFMALVLIASSGSVSFSADFLFLGLLSLIKAAGGLLFWVLLIRAILSWVSQGRSPIEYVFHQLTEPMLAPIRRIIPVMGGFDLSVLVLFIVLQFANFLMGDVIGPIWYQL
>NZ_CP046840.1|WP_000769920.1|1310466_1312092_+|methyl-accepting-chemotaxis-protein
MKLKTQAYLLSAIILAALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKLAQEGKMSEPEAKALATRLMRNNLYKDNEYVYVADENMTFVATPLDPQLHDTSFHDFKDGKGNSVGRLIQDVLRHQSGKLVEYTWTQKQADGSIEEKLSIARKTPHWGWVVGTGIGFNEVNARFWSTAQWQLSLCVVIAVAILSLLLVAIRKILLIIGGEPNEVRSAVQAVAQGRIRREFVIKAPKESIYGAVQQMSSSLADLVAKLEQSMVALRSELAGAGTRAKSIAELTDSQQQSTAMIATAMTEMASSANQVADSARDTAFNTDQADQQSQHTQKLIHNTVSNIQGLATQLQTASTAVADLDLDVKNIAKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAGRTQTSTKEIQQMIHNLQEGSRNAIQTIQICGQTSQSSVQESENAASALALIVSALESVSSMSHQIATAAAEQTQVSDDIARRINMIEESGSKLSRVVMESHNSTQTLTKLARELEQWAAHFEVTR
>NZ_CP046840.1|WP_000546924.1|1313138_1313993_-|co-chaperone-DjlA
MHIFGKILGAFFGFLFGGPFGAIFGIFLGHQFDKARRLNQAGFQSGTFGAGPSQAERQEEFFKSAFSVMGHVAKAKGQVTKEEIQLATIMMDRMNLTLEQKRAAQDAFRDGKESDFPLEQVLERVKIATGGRFDLLQFFLELQVSSAFADGDVHPSERQVLHRIARGLGFSSEQLERRLRMQEAAFRFQQGGGFGGSQQQSHSGQQWQQPSSRHQLADAYEVLGVSESASAQEVKRAYRKLMNEHHPDKLMAKGLPPEMMNVAKEKSQQIQHAYELIRKEKGIK
>NZ_CP046840.1|WP_001883271.1|1314139_1316503_+|LPS-assembly-protein-LptD
MYNPMSCFSRTFLAASISAALFAPQIQAEASVDDNRAQLPNGEQCLVNQPEPTNPGQQPINVEADKLEAINGQKATYSGNVVVVQGKKRIAADNVTLHQQENVVVAEGNVQFSDGEIKTHSTKATNHLNTDEMTLENTRYQFLCEPGRGEAVYVSKTGKAVYEIEDGSITSCPDGDNAWRMRASSIDVDQNEEIATFYNPRLEVQNVPVFYLPYLTVPIGDTRKTGFLYPTASYGSRNGYSFEVPIYWNLAPQYDLETTFNYMQKRGTQLNSVFRYLTDFGAGQIKSEYLADDQLHTELGDRWAFQYEHNGIFQQAWKFEIDYSKVSDINYFSDLDSGVGNREDGQLIQEGRATYRSDNWDSALLVRDFQLLTKDTTSTNLPYRLMPQLSYNYYAPETMKYLDLDLVSHVSRFETDARGKPSATRVHIEPGLKIPFSNTWGNWTTEARVLGTYYQQDLDKTTDAKLEESVTRVIPEIRSVAGIVLERDTVLLDDYTQTLEPKIQYLYVPEKYQDNIGLYDSTLLQTDYYGLFRSRKYSGVDRIESANQVSYGASTRFFDSNYKERLNIAFGQIFYLDSKLNPSNKNPDSTSDKTSYSAWAVEMDFNFADYLFYHGGIQYDIDSQAVQLGNSTLEYRVASGYIQANYRYVAKDYIRNTVGDSITNIDDITRDGISQAGILAGYQLSRKWSASGQYYYDLTTDEALEWLANLTYTSDCWYVGFTYSNQLKSWNGNFVTDPYATPIYENNFSFNIGIIGFGTSIGAGSSMTGVDSAGNSLGYGRPFFLNN
>NZ_CP046840.1|WP_000780524.1|1316555_1317851_+|peptidylprolyl-isomerase-SurA
MKLWKPTLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDSALKTIKANAKQNKQPLPQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQEGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQLRVDDGQDKSTAETLANKLVNDLRNGADFAQMAYAYSKGPKALQGGDWGWMRKEEMPTIFADQIKMQNKGSIIGPFRSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILSDEGAQKQLNEFVQRIKNGEVTFAELAQQYSQDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFKTVHGWHIVEVLDRREVDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVEVLKDEKDEQ
>NZ_CP046840.1|WP_000095773.1|1317840_1318833_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MSSKRIIVTAGEPAGIGPDLVLALSAQDWPHQLVVCADKALLAQRATQLGIQVKLLDYQRDNPVQAQQAGTLLVEHIPLAEPVVAGQLNPANGHYVLKTLERAAKGCMNGEFDAIVTGPVHKGVINRAGVAFSGHTEFFAEQSKTPLVVMMLATEGLRTALVTTHLPLAEVPQAITCERLEQIVHILHKDLVEKFAIAEPKIYVCGLNPHAGEDGVLGMDEIETITPTLQRLREQYGMQLVGPLPADTIFSEKYLQQADAVLGMYHDQVLPVLKYKGFGRSVNITLGLPFIRTSVDHGTALDLAGTGQADAGSFWTALAYAIELVDKKAQ
>NZ_CP046840.1|WP_001243262.1|1318846_1319662_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MRNDVHLGHKARKRFGQNFLNDPYIIDGIVSAINPKPGQNLVEIGPGLGAITEPVGREVDKFTVIELDRDLAERLRNHPELASKLTIHEGDAMRFDFKQLVKPNNKLRVFGNLPYNISTPLMFHLFEFHRDIQDMHFMLQKEVVNRLAAGPGTKAYGRLTVMAQYYCKVVPVLEVPPSAFVPPPKVDSAVVRLVPYEDLPHPATSLEWLDRVVREGFNQRRKTVRNCYKGLAEPETLETLGINPGMRPENLTLAQFVALANWLDATHKTHA
>NZ_CP046840.1|WP_000383338.1|1319733_1320114_+|Co2+/Mg2+-efflux-protein-ApaG
MDVSLPCIKIQVQTRYIEEQSNPEYQRFVFAYLITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYSSGTALDTPVGVMQGQYLMIDEQGESFTVEIEPFRLAVPHVLN
>NZ_CP046840.1|WP_000035032.1|1320124_1320934_+|symmetrical-bis(5'-nucleosyl)-tetraphosphatase
MANYIVGDIQGCFDELQQLLKQAEFNSQLDTLWFAGDLVARGPKSLETLRFVYQLGDAARVVLGNHDLHLLSVALGHHSAKRRDQTQAVLDAPDAAPLLDWLRQQPLLAEHQEFVLCHAGISPQWDLATARQAAQEVESVLRSPEWSTLIEQMYSDQPDAWHPTLQGIDRLRYIVNAFTRMRFCFPDGRLDMQCKLPPKEVTDGSLLPWFQLPQRIALEKTVIFGHWAALEGYVSETVIGLDTGCVWGGTLTMLRWEDKHYFSQAALPA
>NZ_CP046840.1|WP_000973535.1|1321082_1321580_-|type-3-dihydrofolate-reductase
MMISMIAAMADQRIIGKDNQMPWHLPADFAWFKRCTLGKPVVMGRKTYQSIGRPLPGRHNIVISRDASLQIEGVDVVTSIEAALAKAGEVDEVMIIGGGSLYAACLPMAHKLYITEIHAKLDGDTQFPEWGSDWLERSREHYPADEKNAYGMDFVIFERQYPLPT
>NZ_CP046840.1|WP_001892423.1|1321592_1322078_-|hypothetical-protein
MGVVMLSWDLFFGLLNDMFFAAIPAVGFALVFNVPVPALKYCALGGALGHGSRYLMMHFGVPIEWASFFAATLVGMVGVYWSRRFLAHPKVFTVAALIPMVPGVFAFKAMIALVEINHVGFSPELMEALLENFLKAMFIIAGLAVGLAVPGLLFYRRKPII

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046840_1	1.1\|1309983\|37\|NZ_CP046840\|PILER-CR	1309983-1310019	37	NC_049942	Escherichia phage JLK-2012, complete sequence	23524-23560	4	0.892
NZ_CP046840_1	1.1\|1309983\|37\|NZ_CP046840\|PILER-CR	1309983-1310019	37	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	35428-35464	4	0.892

1. spacer 1.1|1309983|37|NZ_CP046840|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*********************.***********. *

2. spacer 1.1|1309983|37|NZ_CP046840|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.892

taggtcgccagttcgattccggcagccggcaccactt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
******.***************.*********** *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

102916 : 145166

Vibrio_phage(41.94%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001161489.1\|102916_103084_+	hypothetical protein	E3U9J0	Vibrio_phage	2.3e-13	100.0
WP_000170632.1\|103076_103244_+	hypothetical protein	NA	NA	NA	NA
WP_001265358.1\|104282_104849_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001881266.1\|105010_106579_+	replication protein	A7BJY2	Enterobacteria_phage	2.7e-58	32.3
WP_001881265.1\|106583_106868_+	hypothetical protein	NA	NA	NA	NA
WP_001052672.1\|106997_107690_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001161489.1\|107767_107935_+	hypothetical protein	E3U9J0	Vibrio_phage	2.3e-13	100.0
WP_000170634.1\|107927_108512_+	DNA-binding protein	E3U9I9	Vibrio_phage	6.4e-114	100.0
WP_000693566.1\|109001_109340_-	helix-turn-helix transcriptional regulator	U5TNA1	Satellite_phage	7.3e-54	100.0
WP_000743997.1\|109465_110545_+	hypothetical protein	U5TQR3	Satellite_phage	2.2e-213	100.0
WP_001890610.1\|110522_110906_+	hypothetical protein	F1CC65	Vibrio_virus	4.8e-70	100.0
WP_000493022.1\|111041_111290_+	colonization factor	A0A0N7F140	Vibrio_phage	8.8e-33	100.0
WP_001881237.1\|111300_112584_+	hypothetical protein	A0A142I701	Vibrio_phage	9.1e-222	100.0
WP_000979342.1\|112580_112874_+	accessory cholera enterotoxin	A0A0F6YNQ7	Vibrio_phage	3.7e-46	100.0
WP_000021616.1\|112870_114070_+	zonula occludens toxin ZOT	A0A142I6Z1	Vibrio_phage	5.3e-240	100.0
WP_001881225.1\|114168_114945_+	cholera enterotoxin catalytic subunit CtxA	A0A142I6Y0	Vibrio_phage	1.3e-151	100.0
WP_000593522.1\|114941_115316_+	cholera enterotoxin binding subunit CtxB	Q77DH7	Vibrio_virus	7.8e-65	100.0
WP_000693566.1\|115917_116256_-	helix-turn-helix transcriptional regulator	U5TNA1	Satellite_phage	7.3e-54	100.0
WP_010895442.1\|117437_117812_+	hypothetical protein	B9V3G5	Vibrio_virus	1.2e-68	100.0
WP_000053920.1\|117905_118130_+	RstC protein	U5TMI6	Satellite_phage	1.1e-34	100.0
WP_000693566.1\|118641_118980_-	helix-turn-helix transcriptional regulator	U5TNA1	Satellite_phage	7.3e-54	100.0
WP_000743997.1\|119105_120185_+	hypothetical protein	U5TQR3	Satellite_phage	2.2e-213	100.0
WP_001890610.1\|120162_120546_+	hypothetical protein	F1CC65	Vibrio_virus	4.8e-70	100.0
WP_000493022.1\|120681_120930_+	colonization factor	A0A0N7F140	Vibrio_phage	8.8e-33	100.0
WP_001881237.1\|120940_122224_+	hypothetical protein	A0A142I701	Vibrio_phage	9.1e-222	100.0
WP_000979342.1\|122220_122514_+	accessory cholera enterotoxin	A0A0F6YNQ7	Vibrio_phage	3.7e-46	100.0
WP_000021616.1\|122510_123710_+	zonula occludens toxin ZOT	A0A142I6Z1	Vibrio_phage	5.3e-240	100.0
WP_001881225.1\|123808_124585_+	cholera enterotoxin catalytic subunit CtxA	A0A142I6Y0	Vibrio_phage	1.3e-151	100.0
WP_000593522.1\|124581_124956_+	cholera enterotoxin binding subunit CtxB	Q77DH7	Vibrio_virus	7.8e-65	100.0
WP_000693566.1\|125557_125896_-	helix-turn-helix transcriptional regulator	U5TNA1	Satellite_phage	7.3e-54	100.0
WP_000743997.1\|126021_127101_+	hypothetical protein	U5TQR3	Satellite_phage	2.2e-213	100.0
WP_010895442.1\|127078_127453_+	hypothetical protein	B9V3G5	Vibrio_virus	1.2e-68	100.0
WP_000053920.1\|127546_127771_+	RstC protein	U5TMI6	Satellite_phage	1.1e-34	100.0
WP_001881197.1\|128138_141815_-	MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin RtxA	B3Y8K3	Vibrio_virus	8.4e-07	100.0
WP_001881196.1\|141799_142261_-	RTX toxin-activating lysine-acyltransferase RtxC	NA	NA	NA	NA
WP_000514481.1\|142286_142646_-	hypothetical protein	NA	NA	NA	NA
WP_149591715.1\|143060_145166_+	RTX toxin T1SS ABC transporter subunit RtxB	W8CYL7	Bacillus_phage	4.9e-39	27.1

DBSCAN-SWA_2

883531 : 890724

Anguillid_herpesvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001162850.1\|883531_883960_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.0e-20	38.4
WP_000107237.1\|884163_885453_-	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.7e-34	34.3
WP_000872176.1\|885672_885867_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_001124187.1\|885915_886254_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_001196560.1\|886267_888118_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	5.3e-106	41.1
WP_001105747.1\|888141_888657_-	co-chaperone HscB	NA	NA	NA	NA
WP_000301571.1\|888705_889029_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	3.0e-25	50.5
WP_000331703.1\|889089_889473_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	5.4e-53	78.2
WP_000775253.1\|889509_890724_-	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	1.1e-32	30.5

DBSCAN-SWA_3

1045139 : 1113278

Bacillus_phage(25.0%)

protease,tRNA,integrase,transposase

attL 1035835:1035850|attR 1116488:1116503

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1035835:1035850	attL	NA	NA	NA	NA
WP_000627048.1\|1045139_1047215_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_001167232.1\|1047231_1049889_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_001090323.1\|1049888_1053461_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_000605305.1\|1053464_1054223_-	hypothetical protein	NA	NA	NA	NA
WP_000595812.1\|1054219_1055389_-	AAA family ATPase	NA	NA	NA	NA
WP_000687849.1\|1055399_1059077_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_000645939.1\|1059095_1059680_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_001080201.1\|1059676_1060276_-	DUF1819 family protein	NA	NA	NA	NA
WP_001153780.1\|1060285_1061173_-	WYL domain-containing protein	NA	NA	NA	NA
WP_000284109.1\|1061280_1061595_-	hypothetical protein	NA	NA	NA	NA
WP_000196207.1\|1061668_1062577_-	DNA polymerase III subunit epsilon	A0A2H4P6W5	Pseudomonas_phage	6.8e-06	26.5
WP_000182836.1\|1062959_1063217_-	hypothetical protein	NA	NA	NA	NA
WP_000116661.1\|1063215_1063665_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A218MND2	uncultured_virus	4.1e-36	57.1
WP_001883756.1\|1063672_1063942_+	hypothetical protein	A0A218MNF2	uncultured_virus	9.3e-28	76.3
WP_001043260.1\|1066368_1067184_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_001082319.1\|1067244_1068048_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	Q75ZG1	Hepacivirus	4.9e-24	34.3
WP_000480968.1\|1068047_1068884_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_001120891.1\|1068855_1069395_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|1069506_1069812_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000214116.1\|1069839_1071054_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.3
WP_001447541.1\|1071270_1072155_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_025989256.1\|1072879_1073506_+	dCTP deaminase	A0A1Y0T038	Pseudomonas_phage	1.2e-46	48.7
WP_000021290.1\|1073520_1074687_+	hypothetical protein	NA	NA	NA	NA
WP_000356960.1\|1074686_1075232_+	hypothetical protein	NA	NA	NA	NA
WP_001031075.1\|1075245_1075800_+	trimethoprim-resistant dihydrofolate reductase DfrA18	J9PU01	Bacillus_phage	1.7e-15	36.9
WP_079993690.1\|1075908_1076130_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|1076160_1077654_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000985631.1\|1078071_1081050_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_000348526.1\|1083223_1083667_-	hypothetical protein	NA	NA	NA	NA
WP_000497805.1\|1084131_1085106_+	ParM/StbA family protein	NA	NA	NA	NA
WP_001267005.1\|1085108_1085378_+	hypothetical protein	NA	NA	NA	NA
WP_001218617.1\|1085379_1086621_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A291AWU1	Escherichia_phage	3.3e-75	39.3
WP_000127614.1\|1086637_1086832_-	DNA-binding protein	NA	NA	NA	NA
WP_000160066.1\|1087715_1089773_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	6.9e-14	34.3
WP_001883468.1\|1089761_1090247_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_000953212.1\|1090207_1090615_-	DNA polymerase III subunit psi	NA	NA	NA	NA
WP_001883466.1\|1090725_1091277_-	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	1.5e-19	32.2
WP_000932672.1\|1091212_1091740_-	SCP2 domain-containing protein	NA	NA	NA	NA
WP_001111411.1\|1091972_1094027_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA
WP_000421327.1\|1094134_1095148_+	U32 family peptidase	NA	NA	NA	NA
WP_000872504.1\|1095159_1096038_+	U32 family peptidase	NA	NA	NA	NA
WP_000981941.1\|1096090_1097428_-	sodium-coupled multidrug efflux MATE transporter VcrM	NA	NA	NA	NA
WP_001883461.1\|1097474_1097894_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001883460.1\|1097980_1098892_-	lipoprotein NlpI	NA	NA	NA	NA
WP_000462070.1\|1099007_1101137_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_000055654.1\|1101499_1101769_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_000124044.1\|1101910_1102849_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_001123656.1\|1102848_1103247_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000192207.1\|1103348_1106045_-	translation initiation factor IF-2	NA	NA	NA	NA
WP_000031601.1\|1106069_1107557_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000147148.1\|1107575_1108031_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_000495557.1\|1108461_1108797_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_001281065.1\|1109053_1110394_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_000913082.1\|1110419_1111256_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.2e-18	32.6
WP_001883452.1\|1111322_1113278_-\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	2.4e-120	44.4
1116488:1116503	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1221809 : 1229072

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001279365.1\|1221809_1222697_+	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	4.1e-56	41.1
WP_001894770.1\|1222964_1225553_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	2.2e-33	23.0
WP_000116737.1\|1225645_1226653_-	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	6.0e-35	34.2
WP_000177568.1\|1226726_1227662_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	7.8e-05	34.7
WP_000002982.1\|1227661_1228288_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	2.0e-36	52.1
WP_001883363.1\|1228280_1229072_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	8.4e-69	51.6

DBSCAN-SWA_5

2339158 : 2345775

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000210573.1\|2339158_2340292_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.4e-64	40.4
WP_001890340.1\|2340300_2341554_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.0e-100	49.5
WP_000543544.1\|2341653_2342103_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_001131994.1\|2342128_2343232_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-43	33.1
WP_000493874.1\|2343236_2343890_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.2e-31	38.2
WP_001122865.1\|2343930_2345040_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	6.7e-64	39.8
WP_000864130.1\|2345304_2345775_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.8e-34	48.7

DBSCAN-SWA_6

2400574 : 2466539

Vibrio_phage(93.18%)

capsid,portal,tail,tRNA,head,terminase,integrase

attL 2434114:2434137|attR 2467224:2467247

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216841.1\|2400574_2401999_+\|tRNA	glutamate--tRNA ligase	NA	NA	NA	NA
WP_000731531.1\|2402294_2403260_+	OmpA family protein	NA	NA	NA	NA
WP_001017843.1\|2403348_2404047_-	Fe3+-citrate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000279435.1\|2404466_2406530_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_000064348.1\|2406833_2407649_+	siderophore-interacting protein	NA	NA	NA	NA
WP_000739493.1\|2415276_2416410_-	hypothetical protein	NA	NA	NA	NA
WP_000759070.1\|2416570_2417206_+	membrane protein	NA	NA	NA	NA
WP_001881911.1\|2417213_2417651_+	flagellar assembly lipoprotein FlgP	NA	NA	NA	NA
WP_001881909.1\|2417760_2418192_-	molecular chaperone	NA	NA	NA	NA
WP_000907265.1\|2418289_2418613_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA
WP_001881906.1\|2418743_2419511_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA
WP_000145786.1\|2419567_2420494_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	1.4e-35	31.6
WP_000125387.1\|2420504_2421332_+	chemotaxis protein methyltransferase 1	NA	NA	NA	NA
WP_001007981.1\|2421551_2421947_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA
WP_000051920.1\|2421951_2422368_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA
WP_000929365.1\|2422385_2423093_+	flagellar hook assembly protein FlgD	NA	NA	NA	NA
WP_000122825.1\|2423121_2424426_+	flagellar hook protein FlgE	NA	NA	NA	NA
WP_000373284.1\|2424608_2425358_+	flagellar basal-body rod protein FlgF	NA	NA	NA	NA
WP_001182097.1\|2425377_2426166_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA
WP_000729679.1\|2426180_2426966_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA
WP_001225051.1\|2427056_2428142_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA
WP_000609516.1\|2428152_2429091_+	flagellar assembly peptidoglycan hydrolase FlgJ	S5M9Y4	Brevibacillus_phage	9.5e-11	31.9
WP_000135483.1\|2429270_2431145_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA
WP_000934642.1\|2431157_2432351_+	flagellar hook-associated protein FlgL	NA	NA	NA	NA
WP_001938933.1\|2432448_2432610_+	hypothetical protein	NA	NA	NA	NA
WP_000154827.1\|2432758_2433898_+	flagellin	NA	NA	NA	NA
2434114:2434137	attL	NA	NA	NA	NA
WP_000116333.1\|2434346_2435384_-\|integrase	site-specific integrase	U3PIJ4	Vibrio_phage	1.5e-198	100.0
WP_000985033.1\|2435383_2435797_-	hypothetical protein	U3PDE6	Vibrio_phage	8.9e-70	100.0
WP_000132153.1\|2435796_2436702_-	NAD-dependent DNA ligase	U3PB51	Vibrio_phage	1.3e-161	100.0
WP_001881894.1\|2436727_2437375_-	phage repressor protein CI	A0A166YHA0	Vibrio_phage	1.1e-119	100.0
WP_000959026.1\|2437520_2437733_+	hypothetical protein	U3PFJ1	Vibrio_phage	6.4e-32	100.0
WP_000253093.1\|2437843_2438383_+	hypothetical protein	U3PIJ8	Vibrio_phage	5.5e-96	100.0
WP_001272765.1\|2438395_2438830_+	hypothetical protein	U3PDF0	Vibrio_phage	2.8e-74	100.0
WP_001031152.1\|2438911_2439445_+	hypothetical protein	U3PB56	Vibrio_phage	3.9e-86	100.0
WP_000997540.1\|2439441_2439852_+	hypothetical protein	U3PCE8	Vibrio_phage	1.8e-75	100.0
WP_001198814.1\|2440101_2440329_+	hypothetical protein	U3PIK2	Vibrio_phage	3.2e-37	100.0
WP_000099608.1\|2440325_2440943_+	DNA methyltransferase	U3PDF3	Vibrio_phage	1.2e-118	100.0
WP_000629095.1\|2440939_2441050_+	hypothetical protein	NA	NA	NA	NA
WP_000613058.1\|2441046_2441631_+	hypothetical protein	U3PB60	Vibrio_phage	3.2e-105	100.0
WP_001909657.1\|2441627_2444213_+	replication endonuclease	A0A166YHE2	Vibrio_phage	0.0e+00	99.9
WP_000756239.1\|2444222_2444759_+	DUF262 domain-containing protein	U3PFK3	Vibrio_phage	4.1e-99	100.0
WP_001140408.1\|2444832_2445171_-	helix-turn-helix transcriptional regulator	U3PIK7	Vibrio_phage	2.8e-53	100.0
WP_001292395.1\|2445408_2445654_+	hypothetical protein	U3PDF9	Vibrio_phage	1.5e-37	100.0
WP_001263191.1\|2445654_2445906_-	ogr/Delta-like zinc finger family protein	U3PB63	Vibrio_phage	1.9e-43	100.0
WP_000729650.1\|2445976_2446192_-	hypothetical protein	U3PCF7	Vibrio_phage	3.1e-34	100.0
WP_001999948.1\|2446175_2447222_-\|portal	phage portal protein	U3PFK6	Vibrio_phage	5.7e-206	100.0
WP_000331803.1\|2447218_2449036_-\|terminase	terminase ATPase subunit family protein	U3PIL1	Vibrio_phage	0.0e+00	100.0
WP_001127095.1\|2449209_2450109_+\|capsid	GPO family capsid scaffolding protein	A0A160DHM4	Vibrio_phage	4.0e-123	100.0
WP_000078361.1\|2450145_2451156_+\|capsid	phage major capsid protein, P2 family	U3PB67	Vibrio_phage	7.0e-193	100.0
WP_000059165.1\|2451171_2451888_+\|terminase	terminase endonuclease subunit	U3PCG2	Vibrio_phage	1.3e-132	100.0
WP_000493401.1\|2451994_2452456_+\|head	head completion/stabilization protein	U3PFL1	Vibrio_phage	1.5e-78	100.0
WP_000122189.1\|2452452_2452941_+	hypothetical protein	U3PIL4	Vibrio_phage	1.6e-89	100.0
WP_000461677.1\|2452927_2453587_+	phage virion morphogenesis protein	U3PDG7	Vibrio_phage	9.1e-117	100.0
WP_000312540.1\|2453588_2454698_+	DUF2586 family protein	U3PB71	Vibrio_phage	1.5e-209	100.0
WP_000063627.1\|2454697_2455156_+	DUF2597 family protein	U3PCG7	Vibrio_phage	1.3e-82	100.0
WP_000382491.1\|2455170_2455380_+	TraR/DksA family transcriptional regulator	U3PFL5	Vibrio_phage	2.0e-33	100.0
WP_001077689.1\|2455376_2455604_+	hypothetical protein	U3PIL8	Vibrio_phage	2.1e-36	100.0
WP_000705022.1\|2455590_2456178_+	lysozyme	U3PDH1	Vibrio_phage	2.5e-110	100.0
WP_000990572.1\|2456152_2456494_+	hypothetical protein	U3PB75	Vibrio_phage	1.1e-52	100.0
WP_000165786.1\|2456701_2456983_+	hypothetical protein	A9ZT39	Vibrio_virus	5.1e-45	100.0
WP_000343647.1\|2457179_2458997_+\|tail	phage tail tape measure protein	U3PFL8	Vibrio_phage	0.0e+00	100.0
WP_001113003.1\|2458986_2459319_+	DUF2590 family protein	U3PIM1	Vibrio_phage	1.7e-55	100.0
WP_000044509.1\|2459315_2460515_+	hypothetical protein	U3PDH5	Vibrio_phage	1.0e-222	100.0
WP_000005870.1\|2460511_2461171_+	hypothetical protein	U3PB79	Vibrio_phage	8.2e-126	100.0
WP_000083759.1\|2461167_2463030_+\|tail	phage tail protein	Q8HA58	Vibrio_phage	0.0e+00	100.0
WP_000369865.1\|2463029_2463554_+	hypothetical protein	U3PFM2	Vibrio_phage	1.1e-96	100.0
WP_000267787.1\|2463556_2464450_+	hypothetical protein	U3PIM3	Vibrio_phage	2.8e-161	100.0
WP_000457681.1\|2464437_2464911_+	hypothetical protein	U3PDI0	Vibrio_phage	6.6e-77	100.0
WP_000779002.1\|2464907_2466539_+	hypothetical protein	U3PB83	Vibrio_phage	0.0e+00	100.0
2467224:2467247	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage