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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP046849 Vibrio cincinnatiensis strain F8054 chromosome 2, complete sequence 6 crisprs RT,DEDDh 0 27 2 0
NZ_CP046848 Vibrio cincinnatiensis strain F8054 chromosome 1, complete sequence 2 crisprs DEDDh,cas3,RT,DinG,csa3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,csx1 1 6 4 0

Results visualization

1. NZ_CP046849
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_1 76244-76932 Orphan I-F
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_2 953797-954785 Orphan I-F
16 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_3 958133-958641 Orphan I-F
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_4 974152-974659 Orphan I-F
8 spacers
RT

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_5 1008655-1009163 Orphan I-F
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046849_6 1030673-1031060 Orphan I-F
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046849_2 2.2|953885|32|NZ_CP046849|CRISPRCasFinder,CRT 953885-953916 32 MH649021 Inoviridae sp. isolate ctii000, complete genome 5843-5874 1 0.969
NZ_CP046849_3 3.4|958342|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958342-958373 32 NZ_CP020456 Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY2, complete sequence 67365-67396 1 0.969
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 MG592429 Vibrio phage 1.047.O._10N.286.55.F2, partial genome 13024-13055 2 0.938
NZ_CP046849_5 5.5|1008923|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008923-1008954 32 NZ_LR594691 Variovorax sp. WDL1 plasmid 3 199846-199877 5 0.844
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MN101226 Klebsiella phage KPN2 HKu-2019, complete genome 89037-89068 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 NC_031095 Klebsiella phage PKO111, complete genome 134531-134562 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MN101225 Klebsiella phage KPN1, complete genome 5650-5681 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MN101229 Klebsiella phage KPN5, complete genome 39270-39301 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 NZ_CP037749 Campylobacter helveticus strain 2013D-9613 plasmid unnamed1 30028-30059 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 NZ_CP020479 Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence 36832-36863 6 0.812
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MT701588 Klebsiella phage Metamorpho, complete genome 28788-28819 6 0.812
NZ_CP046849_3 3.8|958582|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958582-958613 32 MK714353 Klebsiella phage ST13-OXA48phi12.5, complete genome 25139-25170 6 0.812
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 MN694255 Marine virus AFVG_250M362, complete genome 10693-10724 6 0.812
NZ_CP046849_1 1.4|76452|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76452-76483 32 JQ680377 Unidentified phage clone 2210_scaffold709 genomic sequence 12949-12980 7 0.781
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 KX961629 Bacillus phage BJ4, complete genome 81255-81286 7 0.781
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MT584805 Bacillus phage Tomato, complete genome 85300-85331 7 0.781
NZ_CP046849_2 2.2|953885|32|NZ_CP046849|CRISPRCasFinder,CRT 953885-953916 32 NC_011738 Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence 323345-323376 7 0.781
NZ_CP046849_2 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954125-954156 32 NZ_CP020040 Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence 149194-149225 7 0.781
NZ_CP046849_2 2.15|954666|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954666-954697 32 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 2636101-2636132 7 0.781
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 NZ_CP007647 Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence 210143-210174 7 0.781
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 NZ_CP017108 Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence 118938-118969 7 0.781
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 MT741943 Acinetobacter phage Meroveus, complete genome 158986-159017 7 0.781
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 MN662249 Acinetobacter phage Stupor, complete genome 156166-156197 7 0.781
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 MT409116 Acinetobacter phage Octan, complete genome 158063-158094 7 0.781
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 NC_023581 Acinetobacter phage Presley, complete genome 44995-45026 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MN038176 Bacillus phage Phireball, complete genome 81944-81975 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 KT207918 Bacillus phage Eyuki, complete genome 82289-82320 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 KX349902 Bacillus phage Kida, complete genome 81714-81745 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 MF288917 Bacillus phage PPIsBest, complete genome 82214-82245 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 KU737351 Bacillus phage NotTheCreek, complete genome 82062-82093 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP031992 Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence 19658-19689 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 CP033533 Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-3, complete sequence 21088-21119 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP029396 Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence 352420-352451 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP014652 Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence 97011-97042 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP031980 Acinetobacter haemolyticus strain AN4 plasmid pAhaemAN4d, complete sequence 38239-38270 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP022285 Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence 144751-144782 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_MK323043 Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence 174994-175025 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_CP018872 Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence 18849-18880 8 0.75
NZ_CP046849_1 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76873-76904 32 NZ_LR214998 Mycoplasma conjunctivae strain NCTC10147 plasmid 2 2400-2431 8 0.75
NZ_CP046849_2 2.1|953825|32|NZ_CP046849|CRISPRCasFinder,CRT 953825-953856 32 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 153134-153165 8 0.75
NZ_CP046849_2 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT 954005-954036 32 NZ_CP040906 Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence 63291-63322 8 0.75
NZ_CP046849_2 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT 954005-954036 32 NZ_CP040873 Enterococcus faecium strain DB-1 plasmid punnamed1 28454-28485 8 0.75
NZ_CP046849_2 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT 954005-954036 32 NC_022111 Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence 93203-93234 8 0.75
NZ_CP046849_2 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954125-954156 32 NC_012696 Roseophage EE36P1, complete genome 16067-16098 8 0.75
NZ_CP046849_2 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954125-954156 32 MN693229 Marine virus AFVG_25M533, complete genome 8256-8287 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP029643 Arthrobacter dokdonellae isolate rhizosphere plasmid pDCT5, complete sequence 76301-76332 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 KT962247 Cellulophaga phage phi17:2_18, complete genome 41029-41060 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 KT962246 Cellulophaga phage phi4:1_18, complete genome 40630-40661 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 KT962245 Cellulophaga phage phi4:1_13, complete genome 40630-40661 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 KC821632 Cellulophaga phage phi4:1, complete genome 40630-40661 8 0.75
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_021798 Cellulophaga phage phi17:2, complete genome 41029-41060 8 0.75
NZ_CP046849_3 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958161-958192 32 MN694109 Marine virus AFVG_250M780, complete genome 22346-22377 8 0.75
NZ_CP046849_3 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958161-958192 32 MN693682 Marine virus AFVG_250M534, complete genome 22119-22150 8 0.75
NZ_CP046849_3 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958161-958192 32 MN694773 Marine virus AFVG_250M533, complete genome 22096-22127 8 0.75
NZ_CP046849_4 4.5|974420|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974420-974451 32 MT104465 Pseudomonas phage MR1, complete genome 11963-11994 8 0.75
NZ_CP046849_4 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974480-974511 32 AP013427 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28 14980-15011 8 0.75
NZ_CP046849_4 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974480-974511 32 AP013426 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24 13654-13685 8 0.75
NZ_CP046849_4 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974480-974511 32 AP013428 Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32 10950-10981 8 0.75
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 CP033533 Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-3, complete sequence 32702-32733 9 0.719
NZ_CP046849_2 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954185-954216 32 NZ_CP016452 Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence 171890-171921 9 0.719
NZ_CP046849_2 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954185-954216 32 NC_014310 Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence 1837977-1838008 9 0.719
NZ_CP046849_2 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954185-954216 32 NZ_CP022760 Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence 1754181-1754212 9 0.719
NZ_CP046849_2 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954185-954216 32 NZ_CP022789 Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence 1754182-1754213 9 0.719
NZ_CP046849_2 2.8|954245|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954245-954276 32 KF926093 Lactococcus phage phiL47, complete genome 13603-13634 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_KU664810 Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence 103947-103978 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_KY007017 Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence 97249-97280 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_KP398867 Escherichia coli strain DB04277 plasmid pDB4277, complete sequence 85779-85810 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_AP017611 Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence 138501-138532 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP010158 Escherichia coli strain D10 plasmid A, complete genome 43128-43159 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP053732 Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence 139064-139095 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP020546 Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence 53526-53557 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP010316 Escherichia coli strain 789 plasmid pAPEC-O78-ColV 70284-70315 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP012626 Escherichia coli strain SF-468 plasmid pSF-468-1, complete sequence 42197-42228 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP021728 Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence 120537-120568 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP026854 Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence 15831-15862 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP033091 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence 100881-100912 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP053236 Escherichia coli strain SCU-106 plasmid pSCU-106-2, complete sequence 88063-88094 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP049937 Escherichia coli strain JL05 plasmid pARG01, complete sequence 73564-73595 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP019007 Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence 126634-126665 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP018994 Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence 78050-78081 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP024852 Escherichia coli strain AR_0006 plasmid tig00000164, complete sequence 131203-131234 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP012636 Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence 587-618 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_025179 Escherichia coli plasmid pC59-153, complete sequence 96015-96046 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_025139 Escherichia coli plasmid pH2291-144, complete sequence 12022-12053 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP013027 Escherichia coli strain 2009C-3133 plasmid unnamed3, complete sequence 65570-65601 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 CP054455 Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence 117477-117508 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP047577 Escherichia coli strain 94EC plasmid p94EC-1, complete sequence 37073-37104 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 KU578032 Escherichia coli plasmid pCERC4, complete sequence 105400-105431 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP023363 Escherichia coli strain 144 plasmid 134q, complete sequence 46403-46434 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP053282 Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence 128257-128288 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_020271 Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence 47907-47938 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP031107 Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence 67221-67252 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP012113 Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence 66582-66613 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP024133 Escherichia coli strain 14EC007 plasmid p14EC007b, complete sequence 53248-53279 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP019055 Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence 135598-135629 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 LC484363 Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence 122780-122811 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_018954 Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence 65940-65971 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_018966 Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence 65938-65969 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP014489 Escherichia coli strain G749 plasmid pG749_1, complete sequence 50471-50502 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_014615 Escherichia coli plasmid pETN48, complete sequence 137914-137945 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 CP027485 Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence 9119-9150 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NC_011747 Escherichia coli S88 plasmid pECOS88, complete sequence 32479-32510 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP026940 Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence 131883-131914 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP025403 Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence 32972-33003 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_MK461929 Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence 120411-120442 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_MK461928 Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence 116144-116175 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_MH422552 Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence 27879-27910 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_MF474175 Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence 143781-143812 9 0.719
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_MH195200 Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence 14544-14575 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP040783 Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence 80600-80631 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NC_020394 Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence 137461-137492 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP014283 Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence 281311-281342 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP031069 Bacillus sp. JAS24-2 plasmid pl626, complete sequence 622947-622978 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP020005 Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence 75509-75540 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP022446 Bacillus cereus C1L plasmid pC1L1, complete sequence 415240-415271 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NC_014533 Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence 803751-803782 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP044979 Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence 496954-496985 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP032614 Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence 454900-454931 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP007513 Bacillus bombysepticus plasmid pBb, complete genome 88759-88790 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_AP014865 Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence 382472-382503 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP053952 Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence 247557-247588 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP023246 Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence 513602-513633 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP042875 Bacillus cereus strain 09 plasmid unnamed1, complete sequence 258214-258245 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP040345 Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence 500159-500190 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP045607 Bacillus cereus strain SB1 plasmid p1, complete sequence 543214-543245 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 CP020755 Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence 374872-374903 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP050184 Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence 314182-314213 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP021062 Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence 5784-5815 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP016589 Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence 124366-124397 9 0.719
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP053949 Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence 377707-377738 9 0.719
NZ_CP046849_4 4.7|974540|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974540-974571 32 MG592608 Vibrio phage 1.243.O._10N.261.54.B5, partial genome 6249-6280 9 0.719
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 NZ_CP041231 Bacteroides xylanisolvens strain H207 plasmid unnamed1, complete sequence 16198-16229 9 0.719
NZ_CP046849_5 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008743-1008774 32 NZ_CP054001 Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence 24755-24786 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 NC_019846 Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence 79523-79554 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 NZ_CP021826 Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence 155675-155706 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 KY385381 Mycobacterium phage EniyanLRS, complete genome 15370-15401 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 MN585992 Mycobacterium phage MaryV, complete genome 15642-15673 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 NC_008206 Mycobacteriophage Wildcat, complete genome 15652-15683 9 0.719
NZ_CP046849_5 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008803-1008834 32 KP027195 Mycobacterium phage Cosmo, complete genome 15676-15707 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 NZ_CP019718 Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence 27992-28023 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 KT361655 Paenibacillus phage Hayley, complete genome 28871-28902 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 MK533143 Paenibacillus phage vB_PlaP_API480, complete genome 26306-26337 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 KT361656 Paenibacillus phage Vadim, complete genome 30268-30299 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 NC_028767 Paenibacillus phage Vegas, complete genome 30268-30299 9 0.719
NZ_CP046849_5 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1008863-1008894 32 KT361657 Paenibacillus phage Diane, complete genome 30268-30299 9 0.719
NZ_CP046849_5 5.7|1009044|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1009044-1009075 32 NZ_CP014289 Bacillus thuringiensis strain Bt185 plasmid pBT1850046, complete sequence 37734-37765 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NZ_CP036488 Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence 343893-343924 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NZ_CP032297 Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence 221459-221490 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NC_017060 Rahnella aquatilis HX2 plasmid PRA1, complete sequence 431965-431996 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NC_015062 Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence 434371-434402 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NZ_CP034838 Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence 416986-417017 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NZ_CP034839 Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence 416986-417017 9 0.719
NZ_CP046849_6 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030821-1030852 32 NZ_CP034837 Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence 373493-373524 9 0.719
NZ_CP046849_6 6.4|1030881|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1030881-1030912 32 NC_019898 Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence 56599-56630 9 0.719
NZ_CP046849_1 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 76813-76844 32 NZ_CP045339 Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence 1147376-1147407 10 0.688
NZ_CP046849_2 2.9|954305|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954305-954336 32 KU892558 Lactococcus phage PLgT-1, complete genome 9298-9329 10 0.688
NZ_CP046849_2 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR 954425-954456 32 NZ_CP010243 Escherichia coli strain S56 plasmid A, complete sequence 85034-85065 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP020425 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence 28980-29011 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP029156 Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence 17766-17797 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP029153 Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence 11810-11841 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 27624-27655 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP011969 Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence 24302-24333 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 NZ_CP016482 Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence 155978-156009 10 0.688
NZ_CP046849_3 3.8|958582|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958582-958613 32 MN602881 Erwinia phage Midgardsormr38, complete genome 16638-16669 10 0.688
NZ_CP046849_4 4.7|974540|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 974540-974571 32 NC_014653 Photobacterium damselae subsp. damselae virulence plasmid pPHDD1, complete sequence, isolate RM71 39165-39196 10 0.688
NZ_CP046849_5 5.8|1009104|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 1009104-1009135 32 MG198570 Lake Baikal phage Baikal-20-5m-C28, complete genome 126524-126555 10 0.688
NZ_CP046849_3 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT 958402-958433 32 KF114877 Leptospira phage LnoZ_CZ214, complete genome 61540-61571 11 0.656

1. spacer 2.2|953885|32|NZ_CP046849|CRISPRCasFinder,CRT matches to MH649021 (Inoviridae sp. isolate ctii000, complete genome) position: , mismatch: 1, identity: 0.969 

tgcaaaataagaatcaggattaattaatacat	CRISPR spacer
tgcgaaataagaatcaggattaattaatacat	Protospacer
***.****************************

2. spacer 3.4|958342|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020456 (Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY2, complete sequence) position: , mismatch: 1, identity: 0.969 

tacagaggtaagaacgcagcctataaagattg	CRISPR spacer
tacaaaggtaagaacgcagcctataaagattg	Protospacer
****.***************************

3. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MG592429 (Vibrio phage 1.047.O._10N.286.55.F2, partial genome) position: , mismatch: 2, identity: 0.938 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
acctgttgatttagatgatgactagcctcggc	Protospacer
.*********** *******************

4. spacer 5.5|1008923|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 5, identity: 0.844 

cgattcaggtatcccagtgacacccgccgcgc-	CRISPR spacer
cgattcaggtagcccagtgtcacgc-cggcgcc	Protospacer
*********** ******* *** * * ****

5. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN101226 (Klebsiella phage KPN2 HKu-2019, complete genome) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa-	CRISPR spacer
cattgctcaatatggttcaggt-aaatatgagt	Protospacer
*********** ********** ***..*.*.

6. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_031095 (Klebsiella phage PKO111, complete genome) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa-	CRISPR spacer
cattgctcaatatggttcaggt-aaatatgagt	Protospacer
*********** ********** ***..*.*.

7. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN101225 (Klebsiella phage KPN1, complete genome) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa-	CRISPR spacer
cattgctcaatatggttcaggt-aaatatgagt	Protospacer
*********** ********** ***..*.*.

8. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN101229 (Klebsiella phage KPN5, complete genome) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa-	CRISPR spacer
cattgctcaatatggttcaggt-aaatatgagt	Protospacer
*********** ********** ***..*.*.

9. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037749 (Campylobacter helveticus strain 2013D-9613 plasmid unnamed1) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tattgctaaatctggttcaggtaagtcggtaa	Protospacer
.****** ****************. **  **

10. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020479 (Campylobacter helveticus strain ATCC 51209 plasmid pHELV-1, complete sequence) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tattgctaaatctggttcaggtaagtcggtaa	Protospacer
.****** ****************. **  **

11. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MT701588 (Klebsiella phage Metamorpho, complete genome) position: , mismatch: 6, identity: 0.812 

cattgctcaatctggttcaggtaaaacgtaaa-	CRISPR spacer
cattgctcaatatggttcatgt-aaatgtgagt	Protospacer
*********** ******* ** ***.**.*.

12. spacer 3.8|958582|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MK714353 (Klebsiella phage ST13-OXA48phi12.5, complete genome) position: , mismatch: 6, identity: 0.812 

ggaatgttaagaagtccggtaatcgcgtttac	CRISPR spacer
gcaatgttaagaagtccggtaaccgtatctat	Protospacer
* ********************.**..*.**.

13. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN694255 (Marine virus AFVG_250M362, complete genome) position: , mismatch: 6, identity: 0.812 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
ttatgctgatgtagctggtgttttaagtgtag	Protospacer
***.  ******************** ***

14. spacer 1.4|76452|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to JQ680377 (Unidentified phage clone 2210_scaffold709 genomic sequence) position: , mismatch: 7, identity: 0.781 

tgaggatttttcttttgagccaagcttaccgg---	CRISPR spacer
ggaggatttttattttgagcgaag---accagaca	Protospacer
 ********** ******** ***   ***.*

15. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KX961629 (Bacillus phage BJ4, complete genome) position: , mismatch: 7, identity: 0.781 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacgttat	Protospacer
...***** ********* ********** *

16. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MT584805 (Bacillus phage Tomato, complete genome) position: , mismatch: 7, identity: 0.781 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacgttat	Protospacer
...***** ********* ********** *

17. spacer 2.2|953885|32|NZ_CP046849|CRISPRCasFinder,CRT matches to NC_011738 (Gloeothece citriformis PCC 7424 plasmid pP742401, complete sequence) position: , mismatch: 7, identity: 0.781 

tgcaaaataagaatcaggattaattaatacat	CRISPR spacer
aaccaaataagaatcaagattaattattaaaa	Protospacer
 .* ************.********* ** *

18. spacer 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020040 (Streptomyces sp. 3211 isolate 3 plasmid p3211-1, complete sequence) position: , mismatch: 7, identity: 0.781 

cgacaccagagccagcggcaaaagtagtgata	CRISPR spacer
cgtcaccagagccagcggcaaaagctgcaagg	Protospacer
** *********************. *..* .

19. spacer 2.15|954666|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.781 

attctgca--gtatgactgtggtgtttagtgtgc	CRISPR spacer
--tcagaagcgtattattgtggtgtttagtgtgg	Protospacer
  ** * *  **** *.****************

20. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007647 (Lactobacillus salivarius strain JCM1046 plasmid pMP1046A, complete sequence) position: , mismatch: 7, identity: 0.781 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
tggctatgatgttgctggtgttttaacattag	Protospacer
* .********* **************  *

21. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017108 (Lactobacillus salivarius strain CICC23174 plasmid pLS_1 sequence) position: , mismatch: 7, identity: 0.781 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
tggctatgatgttgctggtgttttaacattag	Protospacer
* .********* **************  *

22. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MT741943 (Acinetobacter phage Meroveus, complete genome) position: , mismatch: 7, identity: 0.781 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
taactttgatgtagctggtgtttcaactaaac	Protospacer
* *** *****************.****.  .

23. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN662249 (Acinetobacter phage Stupor, complete genome) position: , mismatch: 7, identity: 0.781 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
taactttgatgtagctggtgtttcaactaaac	Protospacer
* *** *****************.****.  .

24. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MT409116 (Acinetobacter phage Octan, complete genome) position: , mismatch: 7, identity: 0.781 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
taactttgatgtagctggtgtttcaactaaac	Protospacer
* *** *****************.****.  .

25. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_023581 (Acinetobacter phage Presley, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgttggtgaatctggttcaggtaaaaccgcat	Protospacer
..*** * *******************   *

26. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN038176 (Bacillus phage Phireball, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacattat	Protospacer
...***** ********* ********.* *

27. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KT207918 (Bacillus phage Eyuki, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacattat	Protospacer
...***** ********* ********.* *

28. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KX349902 (Bacillus phage Kida, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacattat	Protospacer
...***** ********* ********.* *

29. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MF288917 (Bacillus phage PPIsBest, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacattat	Protospacer
...***** ********* ********.* *

30. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KU737351 (Bacillus phage NotTheCreek, complete genome) position: , mismatch: 8, identity: 0.75 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
tgctgctctatctggttctggtaaaacattat	Protospacer
...***** ********* ********.* *

31. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031992 (Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

32. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to CP033533 (Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-3, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

33. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029396 (Acinetobacter defluvii strain WCHA30 plasmid pOXA58_010030, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

34. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

35. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031980 (Acinetobacter haemolyticus strain AN4 plasmid pAhaemAN4d, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

36. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022285 (Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

37. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK323043 (Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

38. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018872 (Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
gcctttttgttgcattgctgcaaatggttcaa	Protospacer
.**    ** ************ ********

39. spacer 1.11|76873|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214998 (Mycoplasma conjunctivae strain NCTC10147 plasmid 2) position: , mismatch: 8, identity: 0.75 

accaaagtgatgcattgctgcatatggttcat	CRISPR spacer
actattttgaagcattgctggatatggttccc	Protospacer
**.*   *** ********* ********* .

40. spacer 2.1|953825|32|NZ_CP046849|CRISPRCasFinder,CRT matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 8, identity: 0.75 

-tgggtagcagaaccagttgcgtaaagctcata	CRISPR spacer
acgagca-cagaaacagttgcataaagctcagc	Protospacer
 .*.*.* ***** *******.*********

41. spacer 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 8, identity: 0.75 

tttaaaatctccaccttctgttataactgaaa	CRISPR spacer
attaaaatctccacttgctgttatgatttcca	Protospacer
 *************.* *******.*.*   *

42. spacer 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT matches to NZ_CP040873 (Enterococcus faecium strain DB-1 plasmid punnamed1) position: , mismatch: 8, identity: 0.75 

tttaaaatctccaccttctgttataactgaaa	CRISPR spacer
attaaaatctccacttgctgttatgatttcca	Protospacer
 *************.* *******.*.*   *

43. spacer 2.4|954005|32|NZ_CP046849|CRISPRCasFinder,CRT matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 8, identity: 0.75 

tttaaaatctccaccttctgttataactgaaa	CRISPR spacer
tttaaaatctccacgttcttttaaagtcttaa	Protospacer
************** **** *** *...  **

44. spacer 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_012696 (Roseophage EE36P1, complete genome) position: , mismatch: 8, identity: 0.75 

cgacaccagagccagcggcaaaagtagtgata	CRISPR spacer
tgactccagagcctgcggcaaaagtcactaca	Protospacer
.*** ******** *********** .. *.*

45. spacer 2.6|954125|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to MN693229 (Marine virus AFVG_25M533, complete genome) position: , mismatch: 8, identity: 0.75 

cgacaccagagccagcggcaaaagtagtgata	CRISPR spacer
tcattccaaagccagcagcaaaagtagtgctt	Protospacer
. *. ***.*******.************ *

46. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029643 (Arthrobacter dokdonellae isolate rhizosphere plasmid pDCT5, complete sequence) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gctacaatataaataattctgtcatgacgtat	Protospacer
 ***************.***.***    ** *

47. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KT962247 (Cellulophaga phage phi17:2_18, complete genome) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
aatctaaattaaataacactatcaaccactct	Protospacer
  * .**  ******** ********** ***

48. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KT962246 (Cellulophaga phage phi4:1_18, complete genome) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
aatctaaattaaataacactatcaaccactct	Protospacer
  * .**  ******** ********** ***

49. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KT962245 (Cellulophaga phage phi4:1_13, complete genome) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
aatctaaattaaataacactatcaaccactct	Protospacer
  * .**  ******** ********** ***

50. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KC821632 (Cellulophaga phage phi4:1, complete genome) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
aatctaaattaaataacactatcaaccactct	Protospacer
  * .**  ******** ********** ***

51. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_021798 (Cellulophaga phage phi17:2, complete genome) position: , mismatch: 8, identity: 0.75 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
aatctaaattaaataacactatcaaccactct	Protospacer
  * .**  ******** ********** ***

52. spacer 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN694109 (Marine virus AFVG_250M780, complete genome) position: , mismatch: 8, identity: 0.75 

gccacaaccagcacctatttcagataacaacc	CRISPR spacer
ccctgtaccagcaccgatgtcagataacacct	Protospacer
 **   ********* ** ********** *.

53. spacer 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN693682 (Marine virus AFVG_250M534, complete genome) position: , mismatch: 8, identity: 0.75 

gccacaaccagcacctatttcagataacaacc	CRISPR spacer
ccctgtaccagcaccgatgtcagataacacct	Protospacer
 **   ********* ** ********** *.

54. spacer 3.1|958161|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN694773 (Marine virus AFVG_250M533, complete genome) position: , mismatch: 8, identity: 0.75 

gccacaaccagcacctatttcagataacaacc	CRISPR spacer
ccctgtaccagcaccgatgtcagataacacct	Protospacer
 **   ********* ** ********** *.

55. spacer 4.5|974420|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MT104465 (Pseudomonas phage MR1, complete genome) position: , mismatch: 8, identity: 0.75 

tcctaacgggggcgttttactttaaggtgaac	CRISPR spacer
tcctaacgggggccttttagtttctgcaaatc	Protospacer
************* ***** ***  *  .* *

56. spacer 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to AP013427 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S25-C28) position: , mismatch: 8, identity: 0.75 

aagcttaactattccgcaagaccttactgatc	CRISPR spacer
aagctcaactattccccaagaccaacctgtca	Protospacer
*****.********* *******   *** .

57. spacer 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to AP013426 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57-MedDCM-OCT-S27-C24) position: , mismatch: 8, identity: 0.75 

aagcttaactattccgcaagaccttactgatc	CRISPR spacer
aagctcaactattccccaagaccaacctgtca	Protospacer
*****.********* *******   *** .

58. spacer 4.6|974480|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to AP013428 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G16, isolate: uvMED-CGR-C57A-MedDCM-OCT-S39-C32) position: , mismatch: 8, identity: 0.75 

aagcttaactattccgcaagaccttactgatc	CRISPR spacer
aagctcaactattccccaagaccaacctgtca	Protospacer
*****.********* *******   *** .

59. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to CP033533 (Acinetobacter pittii strain 2014S07-126 plasmid p2014S07-126-3, complete sequence) position: , mismatch: 9, identity: 0.719 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
ttctgctcaaactggtgcaggtaaaaccacac	Protospacer
. .******* ***** **********   *

60. spacer 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016452 (Sinorhizobium sp. RAC02 plasmid pBSY16_1, complete sequence) position: , mismatch: 9, identity: 0.719 

atcatgccgccaagcgctggggccagagccag	CRISPR spacer
tcgatgccgccaagcgctgtggccagcacgca	Protospacer
 . **************** ****** .*  .

61. spacer 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 9, identity: 0.719 

atcatgccgccaagcgctggggccagagccag	CRISPR spacer
tcgagttcgccaagcgctgaggccagcgccgg	Protospacer
 . *  .************.****** ***.*

62. spacer 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

atcatgccgccaagcgctggggccagagccag	CRISPR spacer
tcgagttcgccaagcgctgaggccagcgccgg	Protospacer
 . *  .************.****** ***.*

63. spacer 2.7|954185|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

atcatgccgccaagcgctggggccagagccag	CRISPR spacer
tcgagttcgccaagcgctgaggccagcgccgg	Protospacer
 . *  .************.****** ***.*

64. spacer 2.8|954245|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KF926093 (Lactococcus phage phiL47, complete genome) position: , mismatch: 9, identity: 0.719 

attgtcatttttcgacctcctctaatatatct	CRISPR spacer
tcagtcatttttccaactcctctaattctttt	Protospacer
 . ********** * ********** . *.*

65. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU664810 (Escherichia coli strain 11.3-R3 plasmid pCERC5, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

66. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY007017 (Escherichia coli strain 14.3-R4 plasmid pCERC9, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

67. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KP398867 (Escherichia coli strain DB04277 plasmid pDB4277, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

68. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP017611 (Escherichia coli strain 20Ec-P-124 plasmid pMRY16-002_1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

69. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010158 (Escherichia coli strain D10 plasmid A, complete genome) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

70. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053732 (Escherichia coli strain CP55_Sichuan plasmid pCP55-IncFIB, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

71. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020546 (Escherichia coli strain ZJ3920 plasmid pZJ3920-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

72. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010316 (Escherichia coli strain 789 plasmid pAPEC-O78-ColV) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

73. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012626 (Escherichia coli strain SF-468 plasmid pSF-468-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

74. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021728 (Escherichia coli strain Combat11I9 plasmid pCombat11I9-2, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

75. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026854 (Escherichia coli strain MS7163 plasmid pMS7163A, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

76. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033091 (Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

77. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053236 (Escherichia coli strain SCU-106 plasmid pSCU-106-2, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

78. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049937 (Escherichia coli strain JL05 plasmid pARG01, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

79. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019007 (Escherichia coli strain Ecol_AZ159 plasmid pECAZ159_1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

80. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018994 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

81. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024852 (Escherichia coli strain AR_0006 plasmid tig00000164, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

82. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012636 (Escherichia coli strain SF-088 plasmid pSF-088-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

83. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_025179 (Escherichia coli plasmid pC59-153, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

84. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_025139 (Escherichia coli plasmid pH2291-144, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

85. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013027 (Escherichia coli strain 2009C-3133 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

86. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to CP054455 (Escherichia coli strain SCU-487 plasmid pSCU-487-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

87. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047577 (Escherichia coli strain 94EC plasmid p94EC-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

88. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KU578032 (Escherichia coli plasmid pCERC4, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

89. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023363 (Escherichia coli strain 144 plasmid 134q, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

90. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053282 (Escherichia coli strain SCU-308 plasmid pSCU-308-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

91. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_020271 (Escherichia coli O25b:H4-ST131 str. EC958 strain ST131 plasmid pJIE186-2, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

92. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031107 (Escherichia coli strain AMSCJX02 plasmid pAMSC2, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

93. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012113 (Escherichia coli strain PSUO78 plasmid pPSUO78_1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

94. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024133 (Escherichia coli strain 14EC007 plasmid p14EC007b, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

95. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019055 (Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

96. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to LC484363 (Escherichia coli C1 plasmid pColV-C1 DNA, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

97. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_018954 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pCS0010A, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

98. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_018966 (Salmonella enterica subsp. enterica serovar Kentucky plasmid pSSAP03302A, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

99. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014489 (Escherichia coli strain G749 plasmid pG749_1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

100. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_014615 (Escherichia coli plasmid pETN48, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

101. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to CP027485 (Escherichia coli strain 2013C-4390 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

102. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NC_011747 (Escherichia coli S88 plasmid pECOS88, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

103. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026940 (Escherichia coli strain CFS3313 plasmid pCFS3313-1, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

104. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025403 (Escherichia coli strain MS8345 plasmid pMS8345B, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

105. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461929 (Escherichia coli strain 2009_36 plasmid p2009_36_F, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

106. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MK461928 (Escherichia coli strain F2_14D plasmid pF2_14D_F, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

107. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH422552 (Escherichia coli strain L-I1 plasmid pIncFIB, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

108. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MF474175 (Escherichia coli strain J53/pNIT-HK plasmid pNIT-HK, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

109. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_MH195200 (Escherichia coli strain 2009-52 plasmid pSDJ2009-52F, complete sequence) position: , mismatch: 9, identity: 0.719 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
gttacaatataaagaaatctatcaagccgcta	Protospacer
 .*********** ** ******** * *..

110. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

111. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_020394 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-233, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

112. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

113. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

114. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

115. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022446 (Bacillus cereus C1L plasmid pC1L1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

116. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
tttaaagataggcaacattagaaaagatacct	Protospacer
 . *******.****.**********..*.*.

117. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044979 (Bacillus thuringiensis strain BT62 plasmid pBT62A, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

118. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

119. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007513 (Bacillus bombysepticus plasmid pBb, complete genome) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

120. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

121. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

122. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023246 (Bacillus cereus strain HBL-AI plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

123. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

124. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040345 (Bacillus albus strain DLOU-Yingkou plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

125. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

126. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

127. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050184 (Bacillus thuringiensis strain HER1410 plasmid pLUSID1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

128. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

129. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016589 (Bacillus thuringiensis strain KNU-07 plasmid pBTKNU07-01, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

130. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
gtgaaagacaagaaatattagaaaagatgtaa	Protospacer
*..*****.*** *************...*

131. spacer 4.7|974540|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MG592608 (Vibrio phage 1.243.O._10N.261.54.B5, partial genome) position: , mismatch: 9, identity: 0.719 

acatagaacaagcggtaagccttgcaaacaac	CRISPR spacer
ataaggaacaagcgttaatccttgcaaatgcg	Protospacer
*.* .********* *** *********..

132. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041231 (Bacteroides xylanisolvens strain H207 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
tttatatgatgtagctgctgtgttaacaacaa	Protospacer
**  ************* *** ***** ..

133. spacer 5.2|1008743|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054001 (Bacteroides fragilis strain FDAARGOS_763 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

ttactatgatgtagctggtgttttaactgttt	CRISPR spacer
tttatatgatgtagctgctgtgttaacaacaa	Protospacer
**  ************* *** ***** ..

134. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_019846 (Sinorhizobium meliloti GR4 plasmid pRmeGR4a, complete sequence) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
aagtcgcgagggcgcttaacagcggccgtggt	Protospacer
 ** ***************** *** *.....

135. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021826 (Sinorhizobium meliloti strain KH35c plasmid accessoryA, complete sequence) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
aagtcgcgagggcgcttaacagcggccgtggt	Protospacer
 ** ***************** *** *.....

136. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KY385381 (Mycobacterium phage EniyanLRS, complete genome) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
cggtgatgagggcgctcaacaacgggcacaag	Protospacer
..*  ..*********.**** *********

137. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN585992 (Mycobacterium phage MaryV, complete genome) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
cggtgatgagggcgctcaacaacgggcacaag	Protospacer
..*  ..*********.**** *********

138. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_008206 (Mycobacteriophage Wildcat, complete genome) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
cggtgatgagggcgctcaacaacgggcacaag	Protospacer
..*  ..*********.**** *********

139. spacer 5.3|1008803|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KP027195 (Mycobacterium phage Cosmo, complete genome) position: , mismatch: 9, identity: 0.719 

taggcgcgagggcgcttaacaccgggcacaac	CRISPR spacer
cggtgatgagggcgctcaacaacgggcacaag	Protospacer
..*  ..*********.**** *********

140. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019718 (Paenibacillus larvae subsp. larvae strain Eric_V plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

141. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KT361655 (Paenibacillus phage Hayley, complete genome) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

142. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MK533143 (Paenibacillus phage vB_PlaP_API480, complete genome) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

143. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KT361656 (Paenibacillus phage Vadim, complete genome) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

144. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_028767 (Paenibacillus phage Vegas, complete genome) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

145. spacer 5.4|1008863|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KT361657 (Paenibacillus phage Diane, complete genome) position: , mismatch: 9, identity: 0.719 

gcctgttgattttgatgatgactagcctcggc	CRISPR spacer
tcctgatgatattgatgatgactatgcgagtg	Protospacer
 **** **** *************  *  *

146. spacer 5.7|1009044|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014289 (Bacillus thuringiensis strain Bt185 plasmid pBT1850046, complete sequence) position: , mismatch: 9, identity: 0.719 

gatcgaaaccattgtcgagaaaatcaagtggc	CRISPR spacer
aatacaaaccattgaagagaaaatcaagctta	Protospacer
.**  *********  ************.

147. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036488 (Rahnella aquatilis strain MEM40 plasmid pMEM40-1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

148. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032297 (Rahnella aquatilis strain ZF7 plasmid pRAZF7, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

149. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_017060 (Rahnella aquatilis HX2 plasmid PRA1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

150. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_015062 (Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

151. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034838 (Rahnella aquatilis strain KM12 plasmid pKM12v1, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

152. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034839 (Rahnella aquatilis strain KM25 plasmid pKM12v2, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

153. spacer 6.3|1030821|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034837 (Rahnella aquatilis strain KM05 plasmid pKM05, complete sequence) position: , mismatch: 9, identity: 0.719 

gaaagagctggccagtgccatgcagcaacaat	CRISPR spacer
tttcatgctggccagtgacacgcagcaacaac	Protospacer
    . *********** **.**********.

154. spacer 6.4|1030881|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_019898 (Thermobacillus composti KWC4 plasmid pTHECO01, complete sequence) position: , mismatch: 9, identity: 0.719 

tgcaacctctgagaagagtatgaacttgctgt	CRISPR spacer
aaggaagtcggagaagagtatgatcttgctct	Protospacer
 . .*  ** ************* ****** *

155. spacer 1.10|76813|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 10, identity: 0.688 

cattgctcaatctggttcaggtaaaacgtaaa	CRISPR spacer
cgccgctcaaactggtacaggtaaaactgctg	Protospacer
*...****** ***** **********    .

156. spacer 2.9|954305|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to KU892558 (Lactococcus phage PLgT-1, complete genome) position: , mismatch: 10, identity: 0.688 

aatcatgaagaatcgattggtttttcgtaggt	CRISPR spacer
atgtttgaataatccattggtttttcgttaaa	Protospacer
*  . **** **** ************* ..

157. spacer 2.11|954425|32|NZ_CP046849|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010243 (Escherichia coli strain S56 plasmid A, complete sequence) position: , mismatch: 10, identity: 0.688 

tctacaatataaataactctatcaaccagtct	CRISPR spacer
catataatataaataactatatcaaagtagcg	Protospacer
. **.************* ******   . *

158. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020425 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
ttaaaagataagcaatattatataaaagaata	Protospacer
 .****************** * **.. * .

159. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029156 (Clostridioides difficile strain CD161 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
ttaaaagataagcaatattatataaaagaata	Protospacer
 .****************** * **.. * .

160. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029153 (Clostridioides difficile strain CDT4 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
ttaaaagataagcaatattatataaaagaata	Protospacer
 .****************** * **.. * .

161. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
ttaaaagataagcaatattatataaaagaata	Protospacer
 .****************** * **.. * .

162. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011969 (Clostridioides difficile ATCC 9689 = DSM 1296 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
ttaaaagataagcaatattatataaaagaata	Protospacer
 .****************** * **.. * .

163. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016482 (Synechococcus sp. PCC 7117 plasmid unnamed5, complete sequence) position: , mismatch: 10, identity: 0.688 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
caaaaagataagccatattacaaaaatacttt	Protospacer
  *********** ****** ****.   *..

164. spacer 3.8|958582|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MN602881 (Erwinia phage Midgardsormr38, complete genome) position: , mismatch: 10, identity: 0.688 

ggaatgttaagaagtccggtaatcgcgtttac	CRISPR spacer
gtgccattaagaagaccggtaatcgcattggt	Protospacer
* . ..******** ***********.** ..

165. spacer 4.7|974540|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to NC_014653 (Photobacterium damselae subsp. damselae virulence plasmid pPHDD1, complete sequence, isolate RM71) position: , mismatch: 10, identity: 0.688 

acatagaacaagcggtaagccttgcaaacaac	CRISPR spacer
tgatagaacaagcggtaaactttgctctcggt	Protospacer
  ****************.*.****   *...

166. spacer 5.8|1009104|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to MG198570 (Lake Baikal phage Baikal-20-5m-C28, complete genome) position: , mismatch: 10, identity: 0.688 

atgtcccgatatggcagggtgtattaatcccg	CRISPR spacer
actcgatgatatggcaggttgtattgatccat	Protospacer
*. .  .*********** ******.****

167. spacer 3.5|958402|32|NZ_CP046849|PILER-CR,CRISPRCasFinder,CRT matches to KF114877 (Leptospira phage LnoZ_CZ214, complete genome) position: , mismatch: 11, identity: 0.656 

gcaaaagataagcaatattagaaaaggcatcc	CRISPR spacer
aaaaaagaaaagaaatattagaaaaaattgat	Protospacer
. ****** *** ************...   .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 158 : 46421 57 Shigella_phage(55.56%) protease,transposase NA
DBSCAN-SWA_2 54207 : 97493 44 Shigella_phage(20.0%) integrase,transposase attL 59201:59260|attR 100110:100678

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP046848
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046848_1 525481-525695 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP046848_2 1867542-1868589 TypeI-F I-F
17 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP046848.1 664782-664818 0 1.0

1. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to position: 664782-664818, mismatch: 0, identity: 1.0 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccattt	Protospacer
*************************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 296499-296535 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 KU052038 Escherichia phage SerU-LTIIb, partial genome 1164-1200 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 KU052038 Escherichia phage SerU-LTIIb, partial genome 3070-3106 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP022660 Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence 52078-52114 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP045061 Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence 52084-52120 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP045054 Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence 52089-52125 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP045058 Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence 52088-52124 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 LN997803 Escherichia coli phage phi467 15126-15162 1 0.973
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_LN868946 Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence 103821-103857 2 0.946
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP054057 Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence 85817-85853 2 0.946
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NZ_CP023526 Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence 1927-1963 3 0.919
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NC_021742 Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence 35428-35464 3 0.919
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 MH791411 UNVERIFIED: Escherichia phage Ecwhy_1, complete genome 13645-13681 3 0.919
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 MH494197 Escherichia phage CMSTMSU, complete genome 196772-196808 3 0.919
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 KY653118 Morganella phage IME1369_01, complete genome 698-734 3 0.919
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 LC494302 Escherichia phage SP27 DNA, complete genome 76611-76647 4 0.892
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 LT603033 Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I 17117-17153 4 0.892
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NC_027364 Escherichia phage PBECO 4, complete genome 207832-207868 4 0.892
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 NC_049942 Escherichia phage JLK-2012, complete sequence 23524-23560 4 0.892
NZ_CP046848_2 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT 1868530-1868561 32 MK672802 Vibrio phage Va_90-11-286_p16, complete genome 7173-7204 4 0.875
NZ_CP046848_2 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT 1868530-1868561 32 MK672805 Vibrio phage Va_PF430-3_p42, complete genome 29867-29898 4 0.875
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 MK817115 Escherichia phage vB_EcoM_phAPEC6, complete genome 52945-52981 5 0.865
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 MH383160 Escherichia phage UB, complete genome 272124-272160 5 0.865
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 MK327931 Escherichia phage vB_EcoM_G17, complete genome 77929-77965 5 0.865
NZ_CP046848_1 1.1|525526|37|NZ_CP046848|PILER-CR 525526-525562 37 KM507819 Escherichia phage 121Q, complete genome 77938-77974 6 0.838
NZ_CP046848_2 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868230-1868261 32 NZ_CP011248 Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence 348387-348418 8 0.75
NZ_CP046848_2 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868230-1868261 32 NZ_CP032919 Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence 619097-619128 8 0.75
NZ_CP046848_2 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868230-1868261 32 NZ_CP033029 Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence 619180-619211 8 0.75
NZ_CP046848_2 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT 1868530-1868561 32 MN855636 Bacteriophage sp. isolate 140, complete genome 5950-5981 8 0.75
NZ_CP046848_2 2.1|1867570|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1867570-1867601 32 NZ_LR134422 Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13 171278-171309 9 0.719
NZ_CP046848_2 2.11|1868170|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868170-1868201 32 MN689526 Lactococcus phage CHPC966, partial genome 3833-3864 9 0.719
NZ_CP046848_2 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868230-1868261 32 NZ_CP015203 Rhodococcus sp. 008 plasmid pR8L1, complete sequence 624111-624142 9 0.719
NZ_CP046848_2 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868290-1868321 32 NZ_CP013238 Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence 680337-680368 9 0.719
NZ_CP046848_2 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT 1868530-1868561 32 MN856092 Bacteriophage sp. isolate 438, complete genome 2076-2107 9 0.719
NZ_CP046848_2 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT 1868530-1868561 32 MN855701 Bacteriophage sp. isolate 21, complete genome 9033-9064 9 0.719
NZ_CP046848_2 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868290-1868321 32 MN855658 Bacteriophage sp. isolate 13, complete genome 2382-2413 10 0.688
NZ_CP046848_2 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT 1868290-1868321 32 MK448903 Streptococcus phage Javan310, complete genome 26293-26324 11 0.656

1. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccatat	Protospacer
*********************************** *

2. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccatat	Protospacer
*********************************** *

3. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to KU052038 (Escherichia phage SerU-LTIIb, partial genome) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccatat	Protospacer
*********************************** *

4. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP022660 (Salmonella enterica subsp. enterica strain RM11060 plasmid pRM11060-2, complete sequence) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccactt	Protospacer
**********************************.**

5. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP045061 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p2, complete sequence) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccactt	Protospacer
**********************************.**

6. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP045054 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p2, complete sequence) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccactt	Protospacer
**********************************.**

7. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP045058 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p2, complete sequence) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccactt	Protospacer
**********************************.**

8. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to LN997803 (Escherichia coli phage phi467) position: , mismatch: 1, identity: 0.973 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccatat	Protospacer
*********************************** *

9. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_LN868946 (Salmonella enterica subsp. enterica serovar Senftenberg strain NCTC10384 plasmid 4, complete sequence) position: , mismatch: 2, identity: 0.946 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccatca	Protospacer
***********************************.

10. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP054057 (Scandinavium goeteborgense strain CCUG 66741 plasmid pSg66741_1, complete sequence) position: , mismatch: 2, identity: 0.946 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccaaat	Protospacer
**********************************  *

11. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NZ_CP023526 (Cedecea neteri strain FDAARGOS_392 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.919 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcaccagaa	Protospacer
**********************************

12. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.919 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagccggcaccaatc	Protospacer
*************************.******** *.

13. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to MH791411 (UNVERIFIED: Escherichia phage Ecwhy_1, complete genome) position: , mismatch: 3, identity: 0.919 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
******************************** * *.

14. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to MH494197 (Escherichia phage CMSTMSU, complete genome) position: , mismatch: 3, identity: 0.919 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgattccggtagtcggcacaaatc	Protospacer
******************************** * *.

15. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to KY653118 (Morganella phage IME1369_01, complete genome) position: , mismatch: 3, identity: 0.919 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
taggtcaccagttcgactccggtagccggcaccatat	Protospacer
****************.********.********* *

16. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 4, identity: 0.892 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 ******************************* *  *

17. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 4, identity: 0.892 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 ******************************* *  *

18. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 4, identity: 0.892 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aaggtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 ******************************* *  *

19. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to NC_049942 (Escherichia phage JLK-2012, complete sequence) position: , mismatch: 4, identity: 0.892 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
caggtcgccagttcgattccggtagccggcaccatat	Protospacer
.*****.******************.********* *

20. spacer 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT matches to MK672802 (Vibrio phage Va_90-11-286_p16, complete genome) position: , mismatch: 4, identity: 0.875 

attaacaccagaagagctgcaaaacgcagtaa	CRISPR spacer
actaacacctgaagaactgcaaaacgcagtca	Protospacer
*.******* *****.************** *

21. spacer 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT matches to MK672805 (Vibrio phage Va_PF430-3_p42, complete genome) position: , mismatch: 4, identity: 0.875 

attaacaccagaagagctgcaaaacgcagtaa	CRISPR spacer
actaacacctgaagaactgcaaaacgcagtca	Protospacer
*.******* *****.************** *

22. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 5, identity: 0.865 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 * ***************************** *  *

23. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 5, identity: 0.865 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 * ***************************** *  *

24. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 5, identity: 0.865 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aatgtcaccagttcgattccggtagtcggcacaaaat	Protospacer
 * ***************************** *  *

25. spacer 1.1|525526|37|NZ_CP046848|PILER-CR matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 6, identity: 0.838 

taggtcaccagttcgattccggtagtcggcaccattt	CRISPR spacer
aatgtcaccagttcaattccggtagtcggcacaaaat	Protospacer
 * ***********.***************** *  *

26. spacer 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 8, identity: 0.75 

tccgaaggcgaagaaggcgaagtgatttcacc	CRISPR spacer
gccgatggcgaagaaggggaagtggatttccg	Protospacer
 **** *********** ******. **. *

27. spacer 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 8, identity: 0.75 

tccgaaggcgaagaaggcgaagtgatttcacc	CRISPR spacer
gccgatggcgaagaaggggaagtggatttccg	Protospacer
 **** *********** ******. **. *

28. spacer 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 8, identity: 0.75 

tccgaaggcgaagaaggcgaagtgatttcacc	CRISPR spacer
gccgatggcgaagaaggggaagtggatttccg	Protospacer
 **** *********** ******. **. *

29. spacer 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT matches to MN855636 (Bacteriophage sp. isolate 140, complete genome) position: , mismatch: 8, identity: 0.75 

attaacaccagaagagctgcaaaacgcagtaa	CRISPR spacer
attaacaccagaagaggtacaaaatgggttgc	Protospacer
**************** *.*****.* . *.

30. spacer 2.1|1867570|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134422 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 13) position: , mismatch: 9, identity: 0.719 

acaccggcaagtctttttagaagcggtgatta	CRISPR spacer
atgcgcatgagcctttttagaagcgttgatta	Protospacer
*..*  ...**.************* ******

31. spacer 2.11|1868170|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to MN689526 (Lactococcus phage CHPC966, partial genome) position: , mismatch: 9, identity: 0.719 

gtgtggtgcacttcccctctctttcttatttt	CRISPR spacer
acacgtttcacttcctctctctttctaatttc	Protospacer
....* * *******.********** ****.

32. spacer 2.12|1868230|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 9, identity: 0.719 

tccgaaggcgaagaaggcgaagtgatttcacc	CRISPR spacer
ccgaacggcgaagaaggtgaactgatttcgag	Protospacer
.* .* ***********.*** *******.

33. spacer 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 9, identity: 0.719 

agcaccggaaagtttggtggattaacaataag	CRISPR spacer
atatgtagaaagttaggtggattaacagtaac	Protospacer
*    ..******* ************.***

34. spacer 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT matches to MN856092 (Bacteriophage sp. isolate 438, complete genome) position: , mismatch: 9, identity: 0.719 

attaacaccagaagagctgcaaaacgcagtaa	CRISPR spacer
gttaacaccagaagaggtacaaaatgggttgc	Protospacer
.*************** *.*****.* . *.

35. spacer 2.17|1868530|32|NZ_CP046848|CRISPRCasFinder,CRT matches to MN855701 (Bacteriophage sp. isolate 21, complete genome) position: , mismatch: 9, identity: 0.719 

attaacaccagaagagctgcaaaacgcagtaa	CRISPR spacer
gttaacaccagaagaggtacaaaatgggttgc	Protospacer
.*************** *.*****.* . *.

36. spacer 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to MN855658 (Bacteriophage sp. isolate 13, complete genome) position: , mismatch: 10, identity: 0.688 

agcaccggaaagtttggtggattaacaataag	CRISPR spacer
gtgcctataaagtttggtgtattaaaaataat	Protospacer
.   *.. *********** ***** *****

37. spacer 2.13|1868290|32|NZ_CP046848|PILER-CR,CRISPRCasFinder,CRT matches to MK448903 (Streptococcus phage Javan310, complete genome) position: , mismatch: 11, identity: 0.656 

agcaccggaaagtttggtggattaacaataag	CRISPR spacer
gcgggcggaaagcttgctggattaacaacgcc	Protospacer
.  . *******.*** ***********..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 158259 : 165027 6 Escherichia_phage(66.67%) NA NA
DBSCAN-SWA_2 218963 : 226097 9 Anguillid_herpesvirus(16.67%) NA NA
DBSCAN-SWA_3 416040 : 423190 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_4 1585439 : 1592028 7 Staphylococcus_phage(66.67%) NA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage