CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046852	Vibrio furnissii strain 2012V-1225 chromosome 2, complete sequence	1 crisprs	DEDDh,cas3,cas6f,cas5f,cas8f,cas3f,cas1,csa3	0	4	2	0
NZ_CP046853	Vibrio furnissii strain 2012V-1225 chromosome 1, complete sequence	0 crisprs	csx1,DinG,DEDDh,PD-DExK,csa3,RT,WYL,cas3,cas4	0	0	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046852_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046852_1

670792-671420

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	PILER-CR

10 spacers

cas6f,cas5f,cas8f,cas3f,cas1

The CRISPR arrays of NZ_CP046852_1

>merge|NZ_CP046852|1|670792-671420|CRISPRCasFinder,CRT,PILER-CR
ATTCTACCTTGCCTGTGTAGCAGTGAGCTAGCGGGCAGTTGGGGTAAAGTACTTCGTCGATTTCTAAGCTGCCTGTACGGCAGTGAACCTTTACTGGGAATTCCGGCTGAAGTCATAGTTTTTCTAAGCTGCCTGTACGGCAGTGAACAATATCGTCATCTTCTGCGCATTTACGTCAAATTTCTAAGCTGCCTCTACGGCAGTGAACAAAAAACTCATCACTCACCGAGCACATGACCAATTTCTAAGCTGCCTGTACGGCAGTGAACGAAAACCATCCTTCTGATGGTAAAGAGTATCATTTCTAAGCTGCCTGTACGGCAGTGAACTAGATAATGCGTTTTCTAAAGAGTGGTCTATTTTTCTAAGCTGCCTGTACGGCAGTGAACAACATGCGGTGGTGGTGATTGAGCGGCAGCGCTTTCTAAGCTGCCTGTACGGCAGTGAACTTGAGCCGATGGACTTAGGGCAGTATCTGACATTTCTAAGCTGCCTGTACGGCAGTGAACTCCTCCTGCATGGGCAGAACGTATCAGCTTATTTTCTAAGCTGCCTGTACGGCAGTGAACACTTGAACAGATTCTTAAAACAGGCGCTATATTTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP046852|1|1|670792-671420|CRISPRCasFinder
ATTCTACCTTGCCTGTGTAGCAGTGAGC	TAGCGGGCAGTTGGGGTAAAGTACTTCGTCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTTTACTGGGAATTCCGGCTGAAGTCATAGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATATCGTCATCTTCTGCGCATTTACGTCAAA
TTTCTAAGCTGCCTCTACGGCAGTGAAC	AAAAAACTCATCACTCACCGAGCACATGACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAAACCATCCTTCTGATGGTAAAGAGTATCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGATAATGCGTTTTCTAAAGAGTGGTCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATGCGGTGGTGGTGATTGAGCGGCAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCCGATGGACTTAGGGCAGTATCTGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTCCTGCATGGGCAGAACGTATCAGCTTAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTTGAACAGATTCTTAAAACAGGCGCTATAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP046852|1|1|670792-671420|CRT
ATTCTACCTTGCCTGTGTAGCAGTGAGC	TAGCGGGCAGTTGGGGTAAAGTACTTCGTCGA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTTTACTGGGAATTCCGGCTGAAGTCATAGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATATCGTCATCTTCTGCGCATTTACGTCAAA
TTTCTAAGCTGCCTCTACGGCAGTGAAC	AAAAAACTCATCACTCACCGAGCACATGACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAAACCATCCTTCTGATGGTAAAGAGTATCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGATAATGCGTTTTCTAAAGAGTGGTCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATGCGGTGGTGGTGATTGAGCGGCAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCCGATGGACTTAGGGCAGTATCTGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTCCTGCATGGGCAGAACGTATCAGCTTAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTTGAACAGATTCTTAAAACAGGCGCTATAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP046852|1|1|670852-671420|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CTTTACTGGGAATTCCGGCTGAAGTCATAGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AATATCGTCATCTTCTGCGCATTTACGTCAAA
TTTCTAAGCTGCCTCTACGGCAGTGAAC	AAAAAACTCATCACTCACCGAGCACATGACCAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GAAAACCATCCTTCTGATGGTAAAGAGTATCA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TAGATAATGCGTTTTCTAAAGAGTGGTCTATT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	AACATGCGGTGGTGGTGATTGAGCGGCAGCGC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TTGAGCCGATGGACTTAGGGCAGTATCTGACA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	TCCTCCTGCATGGGCAGAACGTATCAGCTTAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC	ACTTGAACAGATTCTTAAAACAGGCGCTATAT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046852.1\|WP_158164438.1\|659900_661652_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182581
NZ_CP046852.1\|WP_020328502.1\|664470_665637_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP046852.1\|WP_158164446.1\|691283_692375_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_CP046852.1\|WP_044363199.1\|666099_667248_-\|NADH:flavorubredoxin-reductase-NorW	unknown	unknown	gnl\|CDD\|179902
NZ_CP046852.1\|WP_158164881.1\|675444_678813_-\|type-I-F-CRISPR-associated-helicase-Cas3	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_CP046852.1\|WP_104965425.1\|668944_670477_+\|nitric-oxide-reductase-transcriptional-regulator-NorR	unknown	unknown	gnl\|CDD\|235331
NZ_CP046852.1\|WP_158164441.1\|678809_679799_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|132676
NZ_CP046852.1\|WP_038158034.1\|661653_662334_+\|two-component-system-response-regulator-NarL	unknown	unknown	gnl\|CDD\|182619
NZ_CP046852.1\|WP_158164439.1\|663325_664396_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225979
NZ_CP046852.1\|WP_158164442.1\|683540_684557_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380513
NZ_CP046852.1\|WP_044364444.1\|671575_672214_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|187870
NZ_CP046852.1\|WP_158164444.1\|687803_688745_+\|aldose-1-epimerase	unknown	unknown	gnl\|CDD\|185695
NZ_CP046852.1\|WP_158164445.1\|688795_691207_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|225990
NZ_CP046852.1\|WP_061055676.1\|674149_675445_-\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	cd09735_cas8f_CAS-I-F	gnl\|CDD\|378220
NZ_CP046852.1\|WP_020433529.1\|667257_668748_-\|anaerobic-nitric-oxide-reductase-flavorubredoxin	unknown	unknown	gnl\|CDD\|235475
NZ_CP046852.1\|WP_158164880.1\|658210_659584_-\|NarK-family-nitrate/nitrite-MFS-transporter	unknown	unknown	gnl\|CDD\|184994
NZ_CP046852.1\|WP_020328501.1\|665720_666062_-\|DUF1971-domain-containing-protein	unknown	unknown	gnl\|CDD\|226142
NZ_CP046852.1\|WP_158164443.1\|684661_687739_-\|glucosylceramidase	unknown	unknown	gnl\|CDD\|368056
NZ_CP046852.1\|WP_158164440.1\|673265_674153_-\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	pfam09614_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP046852.1\|WP_102887504.1\|662389_663037_-\|iron-sulfur-cluster-repair-di-iron-protein	unknown	unknown	gnl\|CDD\|225402

Protein	Function_ID	Function_description	E-value
NZ_CP046852.1\|WP_158164438.1\|659900_661652_+\|sensor-histidine-kinase	gnl\|CDD\|182581	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX.	1.70058e-142
NZ_CP046852.1\|WP_020328502.1\|664470_665637_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.57838e-33
NZ_CP046852.1\|WP_158164446.1\|691283_692375_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	4.59308e-176
NZ_CP046852.1\|WP_044363199.1\|666099_667248_-\|NADH:flavorubredoxin-reductase-NorW	gnl\|CDD\|179902	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW.	0
NZ_CP046852.1\|WP_158164881.1\|675444_678813_-\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	0
NZ_CP046852.1\|WP_104965425.1\|668944_670477_+\|nitric-oxide-reductase-transcriptional-regulator-NorR	gnl\|CDD\|235331	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR.	0
NZ_CP046852.1\|WP_158164441.1\|678809_679799_-\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|132676	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the YPEST subtype of CRISPR/Cas system.	2.93723e-169
NZ_CP046852.1\|WP_038158034.1\|661653_662334_+\|two-component-system-response-regulator-NarL	gnl\|CDD\|182619	PRK10651, PRK10651, transcriptional regulator NarL; Provisional.	5.71982e-103
NZ_CP046852.1\|WP_158164439.1\|663325_664396_+\|CBS-domain-containing-protein	gnl\|CDD\|225979	COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms].	1.8541e-53
NZ_CP046852.1\|WP_158164442.1\|683540_684557_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380513	cd06290, PBP1_LacI-like, ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.84188e-115
NZ_CP046852.1\|WP_044364444.1\|671575_672214_-\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	3.14813e-59
NZ_CP046852.1\|WP_158164444.1\|687803_688745_+\|aldose-1-epimerase	gnl\|CDD\|185695	cd01081, Aldose_epim, aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.	5.88701e-53
NZ_CP046852.1\|WP_158164445.1\|688795_691207_-\|glycosyl-transferase	gnl\|CDD\|225990	COG3459, COG3459, Cellobiose phosphorylase [Carbohydrate transport and metabolism].	3.68104e-180
NZ_CP046852.1\|WP_061055676.1\|674149_675445_-\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	8.21979e-103
NZ_CP046852.1\|WP_020433529.1\|667257_668748_-\|anaerobic-nitric-oxide-reductase-flavorubredoxin	gnl\|CDD\|235475	PRK05452, PRK05452, anaerobic nitric oxide reductase flavorubredoxin; Provisional.	0
NZ_CP046852.1\|WP_158164880.1\|658210_659584_-\|NarK-family-nitrate/nitrite-MFS-transporter	gnl\|CDD\|184994	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional.	0
NZ_CP046852.1\|WP_020328501.1\|665720_666062_-\|DUF1971-domain-containing-protein	gnl\|CDD\|226142	COG3615, TehB, Uncharacterized protein/domain, possibly involved in tellurite resistance [Inorganic ion transport and metabolism].	2.44859e-38
NZ_CP046852.1\|WP_158164443.1\|684661_687739_-\|glucosylceramidase	gnl\|CDD\|368056	pfam04685, DUF608, Glycosyl-hydrolase family 116, catalytic region. This represents a family of archaeal, bacterial and eukaryotic glycosyl hydrolases, that belong to superfamily GH116. The primary catabolic pathway for glucosylceramide is catalysis by the lysosomal enzyme glucocerebrosidase. In higher eukaryotes, glucosylceramide is the precursor of glycosphingolipids, a complex group of ubiquitous membrane lipids. Mutations in the human protein cause motor-neurone defects in hereditary spastic paraplegia. The catalytic nucleophile, identified in UniProtKB:Q97YG8_SULSO, is a glutamine-335, with the likely acid/base at Asp-442 and the aspartates at Asp-406 and Asp-458 residues also playing a role in the catalysis of glucosides and xylosides that are beta-bound to hydrophobic groups. The family is defined as GH116, which presently includes enzymes with beta-glucosidase, EC:3.2.1.21, beta-xylosidase, EC:3.2.1.37, and glucocerebrosidase EC:3.2.1.45 activity.	2.48401e-54
NZ_CP046852.1\|WP_158164440.1\|673265_674153_-\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	8.81159e-150
NZ_CP046852.1\|WP_102887504.1\|662389_663037_-\|iron-sulfur-cluster-repair-di-iron-protein	gnl\|CDD\|225402	COG2846, COG2846, Regulator of cell morphogenesis and NO signaling [Cell division and chromosome partitioning].	2.1257e-54

>NZ_CP046852.1|WP_104965425.1|668944_670477_+|nitric-oxide-reductase-transcriptional-regulator-NorR
MTTLIAQWLHITQDLNSALTRQARFDTLLTTIREVLKCDSSALLLYEDQHFKPLAINGLAKEVLGRRFSINEHPRLEAIARAGDIVRFPSDSNLPDPYDGLIPNHDDKLHIHSCIGLPLLIDDHLIGAITIDAFDPFQFDSLLNHELRFISALAAGGLHTALLLEQLETQTSLPRESYTEKRTLNNDIIGESPEMKSLQQQINAVADTELSVLVMGETGVGKELVANAIHYRSNRANKTLVYLNCAALPESVAESELFGHIKGAFTGAISNRKGKFEQADGGTLFLDEVGELSLELQAKLLRALQYGDIQRVGDDRHIRVNTRIVAATNRILHEEVTAGRFRADLYHRLSVFPIRVPPLREREEDVILLAGFFAEQLRGKLGLNSIRFSSDLIQALKQYSWPGNVRELEHMIKRAGVLSKARTHSSDIELLVSDFDIETSSSSNSVVMNTTNISPISESGMGLKEATDRYQKKIIVQTLNHNQGNWAATARQLELDSGNLHRLARRLGIK
>NZ_CP046852.1|WP_020433529.1|667257_668748_-|anaerobic-nitric-oxide-reductase-flavorubredoxin
MTIHVKNNIHWVGQRDWEVQDFHGTEYKMTKGTSYNSYLIREEKTVLIDTVDHRFSHQFLQNLEMEIDLKSIDFIVVNHAEEDHSGALSALMEKIPNTPIYCTEAAIDSIVGHHHHPEWNFKTVKTGDSIDIGNGKQLVFVEAPMLHWPDSMMTYLTGDAVLFSNDAFGQHYCDERLFNDEVDQNELMDQCLRYYSNILTPFSSLVTAKIKEVLSFNLPVDMIATSHGIVWRDNPAQIIEQYLEWADNYQEDRITIFYDSMSNNTRMMADAIAQGIHDVDSGVAVKVFNVSKHDKNEILANVFRSKGILVGSSTMNNVMMPKVAGMLEEITGLRFKAKKAAAFGSYGWNGGAVDRIHARLTDAGFETAISLKTKWRPDGKAMRECREHGQAIAKLWANNSLSRSTKVHSTALEPASQAPQVNPRKVEEVQLGVQQEQLHPEGCQCMICTVCNWVYDPSLGEPNQGVEPGTVWSDIPDYFLCPECHLGKDVFVEHKA
>NZ_CP046852.1|WP_044363199.1|666099_667248_-|NADH:flavorubredoxin-reductase-NorW
MQTPIVIIGSGFAAYQLVKTVRRVDAHIPIQVFTAEDGTEYNKPDLSHVFSRKQTALDLVVKSGDVFAKEHNIELFANTKVEKVDVDAQQVTANGQVYPYGKLVFATGAKAFVPSMNGDGVRDVLTLNSLQEYQAAETQISRAKRVLIIGGGLIGVEIAMDLATSGKNVTVVEPNTRLLANLIPEFIALPIERQLKQQGVQLALETSVLAVDRSENGSTATLSSGRTVETDIVISAAGLCANTQLAKEAAIRVNKGIVVDSCLQTSIRNVFALGDCAEIQERMMPYLQPIVLSANVLGKQLLGQDAELVLPPMMVKVKTPSYPIQLAGTVNGVENWEVSISAPGIVAKAKDDNGHLVGFVVTSEQVTQAFPLLRELSKSSGR
>NZ_CP046852.1|WP_020328501.1|665720_666062_-|DUF1971-domain-containing-protein
MSHLRIPKEWTIQRSTPFFTNDNVPKALLSHHNTAEGVFGQLCVMEGQVTYYGFTDANATEPEVVVVINAGQFATSPPQYWHRIELSDDAQFNINFWSNSNKTNQPMYQSQLK
>NZ_CP046852.1|WP_020328502.1|664470_665637_-|methyl-accepting-chemotaxis-protein
MRSLFIRMRFVHWLGVIILVMNALFLTENITSQILQGIVVIFLIIHDIDEKIWGVDSLKNVTMYMKNFERKDLSTPCNVNSQYNSEITNVLNVINTFRRNVKLALEEIQQQAMASDEISTQLKYKSTNISDRILRQDASVSSLNEQLEKLDNTSIALKVKAEETQMQVKSTHAKLEHSVGMMDNLVQGLDQYLESNHQLQKSFNQLSAQTLSIENVVSVIAKLADQTNLLALNAAIEAARAGNQGRGFAVVADEVRRLAQSTQESLHEINSIVSEISTTVKMAGAQMSSQTSTITLLSENTIKSQTEIRIANESIGSVLSFIEHNESEQEVNIHTVSQLVGEANAKVDELKQLSSSNAIDCEALIKQGINLTKVTENVVEKLSMFKTA
>NZ_CP046852.1|WP_158164439.1|663325_664396_+|CBS-domain-containing-protein
MSHFDRLLNLSYIAIPVLLTSAIIAVLANYGHTTSATPLLIASIGASVTIIFVIPSSPMGKTWPLIGGHFTAALVGIGLSTAFDNVIVLITLSITSTIIIMIVLKCVHPPGVATALVPVLSNTSQPDLNFLLDPVLLNVLPLALSGITYRRWITMRSSNTTEKSSMNSKSAHEKSSLYFDELHEVLETRNEWLDIDEKTLDEIFKQTHLLALEHKSQKLTCKHVMTENILALTEHDSVYEGLNTLQKNKFSAIPIINSDKEIVGIFSLVDFLLYVEKRKINSFVGLYLLAKKKTSKTIGQYMKRNPISMHEDQHVARLIPYLTSGFHHIPITNDHNQLVGMVTQSDLIEFLYNLKQ
>NZ_CP046852.1|WP_102887504.1|662389_663037_-|iron-sulfur-cluster-repair-di-iron-protein
MNVNNITLCDIIKNIPGSIKILKSNNINAYINLRKTLNEILVIDDIAKYSDMIDKLNDLSRDNKELLKFCDIPHQELIKYIIANFHIKHRDQLNQAIELAKRVETAHYDHPQCPIGLSECLEGIANDLCSHMEKEEQILFPMISQGIYPDGPIFVMEQDHDDHIQALSELMTLVNYLEVHEDACQSWIKLYSLLEQFESDILTHIALENNILFKH
>NZ_CP046852.1|WP_038158034.1|661653_662334_+|two-component-system-response-regulator-NarL
MIKELTFTNADASTILLIDDHPMLRSGIKQLLNTRKHLTVVAEASNGLQGVEYAIDYEPDLILLDINMPELDGLKTLKLLRDKHITSKIIIFTVSNYDEDVSKAIKLGADGYLLKDMEPEELLASIENACLGKTVISPELTSILVGNLREKKQEKLTSVTIDVLSTREQDILKNIAIGLSNKMIANKLFISESTVKVHVKSILKKLQLRSRVEAAVWVHQEKIRFE
>NZ_CP046852.1|WP_158164438.1|659900_661652_+|sensor-histidine-kinase
MNFFNISITKKISFFILMLCSISLSGMFISLITVDNIQGRTHIVNQIGSIRMLIYKSILSTDKSITSKNIIKINTKLNNPNIIKYMIKSGLNDEHGNLLAFFQEKIENQSYESIRSNSDEFVKIIDNLIYNVELNTENNIKSLENIQKVFSIMIIIFGIYSIGNLYSRLFKPWMSILDISRSIKSGDFSKKFSVQRHKDEMNELGDSINLMSESLKETYINLENIVYHKTEDLNRKNRYLDFLYRACKKFNNEQYSCDMLAPLIKELIELTGIHKVTILINDYQESDNTQTFDFGSLSRPEFCKNISCDLCFDKKKVFIENLSEITIKLKDSSHDYGRIVISNNTKSPLNTENEQLIIAFSELLTQSLSVFYKVQQDQQLLILKERNTIARELHDSIAQSLSCLKIKLSILQMDLSHLDEEQISIIGEMREEVNVAYCQLRELLTTFRLKLDGLGFLPALENTVKEYNQKIGTKINLNYEIPANKISAHHSIHLIQIIRELLNNIYKHAHASDVTLDLSMKDNDVSLIILDDGCGFSTSQENSRYGLKIIGDRAQSLSGKWDIISSPGKGTEFYLTFPIYSRV
>NZ_CP046852.1|WP_158164880.1|658210_659584_-|NarK-family-nitrate/nitrite-MFS-transporter
MESSGRVSAHSIKQWFPEDRQFWLSQGQYIAKRNLWISIPCLLLSFCVWMIFSAVAVNLPKVGFSFSTEQLFLLTALPSVSGAIGRIPYSFTISIFGGRRWTAFSTLMLVVPMVWLGIAISNPHTSYSTFVMIALLCGLGGANFASSMANISFFYPKEMQGSALGLNGGLGNLGVSVMQLVVPIAISVQWFTSQSEGPHLQNAAWIWVPLILLFSLISWFGMNDIENAKASFKEQVKVLKQGHLWLMSLLYLSAFGSFIGFSAGFAMLSQTQFPEVEVLKFAFIGPLIGALMRPVGGAWSDKFGGIKVTFLNFVLMALLTVLIFFTIPSESTSGSFVIFLIIFMGLFACSGIGSGSTFQMIAVLFRRIVTQQARMAGLDEETIMRKTGTDTAAALGFISAIGAFGGFFIPQAFGLSLSLTGSASSALILFLFFYVVCSIITWFVYGRNIENGYATKK
>NZ_CP046852.1|WP_044364444.1|671575_672214_-|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MNYYQEITLLPDADIALGFLWQNVFQQVHIALVEHKVASNQSLVAVGFPDYRQAKFPLGAKLRLFAKEQATLEKLAIHRWLTRLEDYVHIKGIKPVPNDVTYVSFVRKQVKSPERIERDMQQKAELWAAKSGKPLVECLADLQQSKPTALCSLPFIYLHSQQTKQRSPEKNSKFPLFIQMQQQSTSQDGGFDCYGLSSKANGQSALATVPNF
>NZ_CP046852.1|WP_158164440.1|673265_674153_-|type-I-F-CRISPR-associated-protein-Csy2
MNVLILPHLKIHNANALSSPFTIGFPAMTAWLGFVHALERKLSQAGLSDLMLHSAAVVSHRCDVQTHKGEGDFVHSIIGTGNPLDKDGSRSAFIEEARCHLDVSLVIEWSGNEEQVQQPEFTEQLQAVIATMKVAGGDVLSIGKPSIKSVITEQDTAQVLRQLMPGYVLIERRDLMLEAMKQGADALDALLGYLTVHHHCEQLEDQSVVWHSQRKTSGWIVPIATGFQGISPLDTAKNQRDPSVPHRFAESVVTLGEFVMAHKIKHLDDILWQYNPDLENGLYLCQQVNAINEHQ
>NZ_CP046852.1|WP_061055676.1|674149_675445_-|type-I-F-CRISPR-associated-protein-Csy1
MEGSRVLDPAIAAFFAERKEAWLKKNISAAMSDTEVLEKQQECEQNFLLDNWLPDAARRIGSRALTTHPSKFSHPSTGVGKTNIKDGTFVSPVLFEGNQRNDGFVRSGNVRFDLTDSVGDAGALAAEDFLRVTLSDGMSVLKHIESETKVARALLTVKGVDYEQLRSSFLAIKSTSEGISTNSKIKQVYFPVADQQYHLLSLLTHSGHLFELRQRLDALRFSNEANEARERKKVNRFHPVGYQETFGLTTIGFGGTKPANISVLNNKFAGKAHLLASIPPELTPRDIRLPRTDFFKESFTAWQAKEVLEALHRLFQTDYNNVNLRDGRDYRIQQYVDLVIEKMWQVRLFLEAYSGELSSALPLEQKIWLYPEFADLRHQEDEWLDKITRHIARGLINHYSRSKVITSPITLADQELLAIEKVVASNKENLR
>NZ_CP046852.1|WP_158164881.1|675444_678813_-|type-I-F-CRISPR-associated-helicase-Cas3
MMVTFVSQCEKNALKKTRRVLDAFANRIGDNTWQTLITEEGLLTVKKMLRQTASRSTAVSCHWIRSRSRSQFLWVVGNKKKFNAEGYVPVNSTEKDLLNSGFENDWKYLPLIKAITGMAALLHDWGKASLLFQEKLNPEIKNKHKGDPLRHEWISCLLFQQWISNQNHERLDEVWLNSLIDKGIDETCFNTNVLQKEKALAELPTAAALIAWLIVSHHRLPLPKEKDLCDRQREVDNSSLSDLLARITPAWGYENRFDEYNALLPKCFEFPLGLLSNSSIWLAELKRRAKDLLHHLPLLDQAMNDGSWRGILHHARLCLMLGDHYYSSQPNDHQWKASIELYANTDPATKARKQKLDEHLVNVAKVAVNTVKLLPFFETEPLKATELSELVPKANTPKAFRWQDKAVRKINEWREHSEDKSQGYFVVNMASTGCGKTIANAKIMQALSEEGESLRFILALGLRTLTLQTGDEYKERLKLQESDLAVLIGSKAISELHKSGKAVEKDDIEPEQADAGSESLESLQDENDVLDWQGVLPEEELTTVLTKEKDRKLLYAPVLVCTIDHIMAATETKRGGRYILPCLRLMSSDLVIDEIDDFTGDDLIAIGRLVHLAGMLGRKVMISSATIPPDLALGLYNAYRQGWKVFAASCDRVSTVNCVYVDEFSADVQMVGCDDADLAAYEAFQQRFVSKRVDKLKQQVAKRKADIIPCIKQNDQPLEQQYFEIVKQAILAKHQHHNTLEPESQSRVSFGVVRVANIQPCVELTQYLLSCDWPADTEVRCMAYHSQQVLLLRHEQEKHLDEVLKRKEKTGELPEAFAHPVIRDHLTTCQAKNLIFILVATPVEEVGRDHDFDWAVIEPSSFRSIIQMAGRVRRHRDGEIQEPNIGLLQYNVKGFRGGAERVFNHPGYETDSTTQLATHDLSELVDEKSLLQAVNAIVRIQKRAVLEPRNNLADLEHFATAKTLGTDQIGKPQQANTSRQDRYSRNRRNSAPQSCWHEHLHGHIHGYWWLTALPQYFKRFRKSEPTVQIYLVKKARSIGFCLPDEEMPSIDEVLNIKHLLLPPMQQQKLWLQRDYSELVSLYSASAEQELATSVRYGEISFVYREGNQQYSYNDQLGLVKVK
>NZ_CP046852.1|WP_158164441.1|678809_679799_-|type-I-F-CRISPR-associated-endonuclease-Cas1
MDDLSPSDLKVILHSKRANMYYLEYCRVMQKNGRVLYLTEADKENLYFNIPIANTTVLMLGNGTSITQAAMRMLSQAGVLVGFCGGGGTPLHMACEVEWFTPQSEYRPTEYLQGWLSFWFDDEKRLAAAKQFQNARIDYLQRVWRSDRELTLEKFNLQDEVINQSLDTFHQRTEAASKPADLLLTEAHLTKALYKYAANNTGKQGFTRQHQPDKKCTDKANDFLNHGNYLAYGLAASCLWVLGIPHGFAVMHGKTRRGALVFDVADLIKDAIVLPWAFVCAKENASEQEFRQQILQAFIEHKALDFMFDTVKHVALQGKEEEEREAHQL
>NZ_CP046852.1|WP_158164442.1|683540_684557_-|substrate-binding-domain-containing-protein
MTNKKNKAPTVYDVAKLAGVSPSTVSRFLNRTTFVAEEKSHKIEQAITTLGYKPNFQMQQDKSRRSMTIGVLVQHPDSPYTSSILNDMERVLLAQGYSLVLATGHWQNKLEMNALEYLMKCSVDGLIIVTGSLSEHMILKTAESIPVVAVGYNIEGENIRSLNLDNVMGGYIATLHLLQLGHMNIAHIKGLESQPDSRARLKGYKKALLEANIKPNPKLIKQGDFRSETGYQMTVELIESKVHFSALFAANDQTAYGAIKALTDHGYKVPEDVSVIGFDDLPVSQYFTPALTTLRQPIEEIGALCARSMLNLLSGERHEVRLPPIDLIVRQSTKSIYR
>NZ_CP046852.1|WP_158164443.1|684661_687739_-|glucosylceramidase
MINKIPYTSYSGQAGALCSKGNAVEFLQPWYTPISTTPANTGMAVGGIGSTFTLTPQGNTPNFSFIPGIFVDCEYESIHFNDFYFSVMDEHSLDNLDIPNVSELSLFLKYYPADFSFDIFHANNKGPILYGIKDCLRSGLFYLNNKSNFERWQIEFSDKTQQAITNDPSSLETQLLVVIDFFNGLLVNNSARALSLTANNGSSVESIDPSNIEYRALYPIAEYEYQGLESVALTRQVISPIVKNDQMLCSLPMHWNHFEMSNRSDKTQLVTLVQPLHNLIGSTYKKAREGVQDSCCHLVQNAISQQHQPVTISGAGFEFHGVSMTSNSPYDSDISGEVLYGVHTQFDGVAAEQVTVTVKPQVYCSKADQQVERALKTGRTNAHFDRGIHSGREPLSALVCVQVTLKPSETIALRFAQVMDHSKILLDGWESEKAYARYFDAQPRAQSILNQTLPRLSEIEQNIISQQREFLDNASQNFVDNDSALRFATMAMNSLSFLAESTVWDKENVLLVKECVDYPFFNSLDVYFYGSFSLLYLLPELDGCVMKHFAKAILNSDEKLRRYWEYEDKPYAELVDEKYQGSRAERGAVIHDLGSPFDIEPDAYSWHNVKEWKDLAPKFILMVYRHWQKTGNREVVESCWSSVKESIDYLTNLIEDGDTLPLTRGTDDTFDNLASHGVSIYCGGLWVAGLRAASELALLVGEKELAQGYTQRSKEALETLERGLWDEQKGYYHFFITPVQAKHLTGNGFESLEKLGLTLTGNTVHDASLVNAYLDAYDVDSSISKRDQRLAKKQRLIELAPQAFSAEFAKLEADSDNSFGDALLADSYLKQVDLPGLFDSSRIERTLDFIYQTNFVSNSPKLGVANMTLADGRPHDAFQAQDVWIGVQFSVAAALRLAGKQEQAEFLMDTVYQALYSMAKIPFAAPEGFNCSVTVSGKDIAQRFDLKSEVASELLLQLQKVGHLFADGRVNPELTQNIEEFALSLSKLPSNADYRELHTWLLSTGLKYTAGRYFRPGMIYAYLYR
>NZ_CP046852.1|WP_158164444.1|687803_688745_+|aldose-1-epimerase
MFKLIKNNFGELNSTTILNSELGIQVDIIQDFGAIINQYRVNHSPFSFIVGYQDSHDLIQSHPFFSRSAKLFPFPNRLKAGQYRYRQRDYTLAANFPWSEHAVHGLLYNQPFKLVAHEANSEYAEATFRFETTKLADGYPFAFRLDVRYRIDYQGTLSCNTTITNLGTEHFPFGDAWHPYFSLGCDLKHCQLTMAAHTELEHQHDLPTGQYLSSNVFSTPTSLEGVNLNNCYQFSDSSEQTLALTRDDKSASLQVNQGKGYSFVQLYTPPSEPSIAIEPMTCPVDAFNNHIGLLELAPEETVQFEWQCQATFV
>NZ_CP046852.1|WP_158164445.1|688795_691207_-|glycosyl-transferase
MKFGYFDDNNKEYIATTPCTPIKWCNYVGTLEFGGLVDSNGGVVLCKGDPALNRITKYIAQLPNSDFKGSTVYLKVTNREGKVEVFSPFYTPTLKPLEKFENHTGLSYTKIISEGYGVRCEVTLFVPKDAPVLLEDIKVTNISDEELHVDVVPVFEFTHFDALKQLVNADWVPQTMTLKAHQQASGHTVLEQYAFMKRDYAVNLMTADRPATSFDGDRQKFLGNMGYGSWAAPEKLFTAELGNSECLRGDNIGALNLRLGWLAPQQNERTVVQLTQMPSLAQAEPMLAKYRDHQEVDKAFDALAAHWDNYLAAVQVETPDPAMNSMLNIHNPRQCHTTKNWSRYLSLYQLGYGARGIGFRDSSQDTLGVITHMPEEAREFIERLLSVQNVDGSAMHQFFPSTMEANAGDSREEEDRPDYYGDDHLWIVYAVTQYVKETGNAAFLDKLIPFYQKDKQGKPRESASVWEHLCRAIEFTRGNTGQHGLPLLGFADWNDTVNLPTGAESLMVASMYGKALLDMLDLCRLRGEDARAAQYQGQYEQMKAIVNQCGWDGEWFVRYFDEQGQPVGSHTNAQGQIYTNGQSWPVIAGFAEQERATQALNSVYTKLNTANGIKLSTPGYNGFNPNLGGVSTYPPGAKENGGIFLHSNPWVMIAEAKMGNGDRAYEYYRQINPASKNDVIDIFESEPYCYPQNILGDEHPQFGLGRNAWLSGTSSWTYVAGTQWILGVRPDIDGLIVDPCIPSDWKEFRVKRQFRGATYHIHVTNPDKVSKGVAELRVNGQVLAGNKVPVFTEGEHQVEVRLG
>NZ_CP046852.1|WP_158164446.1|691283_692375_-|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MAKVEFRKIKKSFGNVDVVKHFDFTVNDGEFVVFLGPSGCGKSTTLRMLAGLEDISSGEIYVDDKLMNKIDAKDRDLAMVFQSYALYPHMTVYENIAFALKLKGMKKPDIDVEVRKAAKMLELEALLDRKPKELSGGQRQRVAMGRAMVRTPKVFLFDEPLSNLDAKLRGVMREEIKQLHRELKTTTIYVTHDQIEAMTLADRIVILKDGYVAQVGTPTEVFKRPANKFVAQFIGNPSMNMLDAKLISEQNEYFILLGDVKIPLPERFKAHASKNLALHFGIRPTDIHLRPEQVDHDRVLPIPVTIKDKELLGASILLKTEVSGQPLTVETQAAEVDSKDQTLYVDLDAIHLFDALSEKSLAH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046852_1	1.7\|671181\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671181-671212	32	NZ_CP046854	Vibrio fluvialis strain F8658 plasmid unnamed1, complete sequence	20721-20752	2	0.938
NZ_CP046852_1	1.6\|671121\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671121-671152	32	NZ_CP026117	Lactobacillus curvatus JCM 1096 = DSM 20019 plasmid pLDW-27, complete sequence	7565-7596	8	0.75
NZ_CP046852_1	1.7\|671181\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671181-671212	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2177014-2177045	9	0.719
NZ_CP046852_1	1.7\|671181\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671181-671212	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	2423563-2423594	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NZ_CP031069	Bacillus sp. JAS24-2 plasmid pl626, complete sequence	159497-159528	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NZ_CP011154	Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence	465691-465722	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NZ_CP011152	Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence	81193-81224	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NZ_CP045607	Bacillus cereus strain SB1 plasmid p1, complete sequence	400960-400991	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	CP020755	Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence	551003-551034	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NC_020385	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence	256875-256906	9	0.719
NZ_CP046852_1	1.9\|671301\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671301-671332	32	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	182073-182104	9	0.719
NZ_CP046852_1	1.10\|671361\|32\|NZ_CP046852\|CRISPRCasFinder,CRT,PILER-CR	671361-671392	32	MT774396	CrAssphage cr53_1, complete genome	62327-62358	9	0.719

1. spacer 1.7|671181|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046854 (Vibrio fluvialis strain F8658 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.938

aacatgcggtggtggtgattgagcggcagcgc	CRISPR spacer
aacatccggtggtgatgattgagcggcagcgc	Protospacer
***** ********.*****************

2. spacer 1.6|671121|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026117 (Lactobacillus curvatus JCM 1096 = DSM 20019 plasmid pLDW-27, complete sequence) position: , mismatch: 8, identity: 0.75

tagataatgcgttttctaaagagtggtctatt	CRISPR spacer
gagataatgcgctttctaaatagtagattgta	Protospacer
 **********.******** ***.* .*.*

3. spacer 1.7|671181|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

aacatgcggtggtggtgattgagcggcagcgc	CRISPR spacer
tggatgcggtcgtggtgattgcgcggatgcca	Protospacer
 . ******* ********** ****  **

4. spacer 1.7|671181|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aacatgcggtggtggtgattgagcggcagcgc	CRISPR spacer
cccagccggtggtggtgatcgtgcggcaggat	Protospacer
  **  *************.* ******* ..

5. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP031069 (Bacillus sp. JAS24-2 plasmid pl626, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

6. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011154 (Bacillus cereus strain CMCC P0011 plasmid pRML05, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

7. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP011152 (Bacillus cereus strain CMCC P0021 plasmid pRML04, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

8. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045607 (Bacillus cereus strain SB1 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

9. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to CP020755 (Bacillus thuringiensis strain ATCC 10792 plasmid pLDW-16, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

10. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NC_020385 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-328, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

11. spacer 1.9|671301|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021062 (Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcctgcatgggcagaacgtatcagcttat	CRISPR spacer
actaaccagatgggcagaacgttttagcttat	Protospacer
 *.  *.. ************* *.*******

12. spacer 1.10|671361|32|NZ_CP046852|CRISPRCasFinder,CRT,PILER-CR matches to MT774396 (CrAssphage cr53_1, complete genome) position: , mismatch: 9, identity: 0.719

acttgaacagattcttaaaacaggcgctatat	CRISPR spacer
acttgaacagatttttaaagcagacctagcac	Protospacer
*************.*****.***.* . ..*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

311488 : 355384

Vibrio_phage(39.58%)

head,tail,lysis,terminase,integrase

attL 300694:300708|attR 330729:330743

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
300694:300708	attL	NA	NA	NA	NA
WP_158164249.1\|311488_312643_-\|integrase	tyrosine-type recombinase/integrase	O21940	Phage_21	7.7e-63	38.0
WP_148497474.1\|312632_312857_-	excisionase	NA	NA	NA	NA
WP_158164250.1\|312893_313565_-	hypothetical protein	A0A1V0E8E6	Vibrio_phage	8.5e-70	56.1
WP_158164251.1\|313612_313978_-	hypothetical protein	NA	NA	NA	NA
WP_158164252.1\|313964_314105_-	hypothetical protein	NA	NA	NA	NA
WP_158164253.1\|314150_315281_-	recombination-associated protein RdgC	W6AT81	Vibrio_phage	1.7e-91	46.3
WP_158164254.1\|315294_315654_-	hypothetical protein	NA	NA	NA	NA
WP_158164255.1\|315640_315883_-	hypothetical protein	NA	NA	NA	NA
WP_158164256.1\|315885_316311_-	hypothetical protein	A0A1V0E8D7	Vibrio_phage	8.3e-31	46.4
WP_158164257.1\|316307_316901_-	hypothetical protein	K7R9L4	Vibrio_phage	1.8e-71	59.7
WP_158164258.1\|316897_317326_-	hypothetical protein	A0A2I7RTP4	Vibrio_phage	2.2e-10	37.5
WP_158164259.1\|317322_318147_-	DNA adenine methylase	A0A0K1LM14	Caulobacter_phage	2.0e-68	47.4
WP_158164260.1\|318143_318794_-	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	7.2e-50	46.4
WP_158164261.1\|318833_319043_-	hypothetical protein	NA	NA	NA	NA
WP_158164262.1\|319035_319200_-	hypothetical protein	NA	NA	NA	NA
WP_158164263.1\|319189_319792_-	3'-5' exonuclease	I3PUZ1	Vibrio_phage	7.3e-73	65.3
WP_158164264.1\|319831_320824_-	hypothetical protein	A0A2I7RSX4	Vibrio_phage	3.9e-31	38.0
WP_158164265.1\|320950_321874_-	hypothetical protein	A0A191ZDG3	Pseudoalteromonas_virus	3.5e-50	39.7
WP_158164266.1\|321885_322272_-	hypothetical protein	NA	NA	NA	NA
WP_158164267.1\|322406_322709_-	hypothetical protein	A0A2I7QLM4	Vibrio_phage	7.5e-34	72.5
WP_158164268.1\|323605_323869_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_158164269.1\|323845_324025_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_158164270.1\|324101_324248_-	hypothetical protein	NA	NA	NA	NA
WP_158164271.1\|324729_325407_+	hypothetical protein	A0A1W6DWH5	Salmonella_phage	9.5e-61	56.5
WP_158164272.1\|325454_326012_-	hypothetical protein	NA	NA	NA	NA
WP_158164273.1\|326034_326700_-	helix-turn-helix domain-containing protein	Q37946	Enterobacteria_phage	5.3e-64	57.6
WP_158142205.1\|326814_327024_+	helix-turn-helix domain-containing protein	A0A0M4RTV8	Salmonella_phage	2.3e-10	47.7
WP_158164274.1\|327036_327810_+	hypothetical protein	A0A0M3LS90	Mannheimia_phage	8.1e-32	31.6
WP_158164848.1\|327980_328532_+	ATP-binding protein	A0A2I7QS85	Vibrio_phage	5.1e-73	68.9
WP_158164275.1\|328544_328766_+	hypothetical protein	NA	NA	NA	NA
WP_158164276.1\|328773_329097_+	hypothetical protein	A0A1I9KG94	Aeromonas_phage	3.1e-09	43.0
WP_158164277.1\|329093_329294_+	hypothetical protein	NA	NA	NA	NA
WP_158164278.1\|329290_329563_+	hypothetical protein	A0A2I7S8J3	Vibrio_phage	3.2e-20	55.3
WP_158164279.1\|329555_330023_+	hypothetical protein	A0A1V1FCN0	Vibrio_phage	1.8e-34	53.5
WP_158164280.1\|330000_330462_+	DUF1367 family protein	A0A0M3LR84	Mannheimia_phage	1.2e-27	40.4
WP_158164281.1\|330711_331002_+	DUF1364 family protein	A0A2I7QSH6	Vibrio_phage	2.7e-25	58.0
330729:330743	attR	NA	NA	NA	NA
WP_158164282.1\|330998_331385_+	hypothetical protein	NA	NA	NA	NA
WP_158164283.1\|331567_331768_+	hypothetical protein	A0A1V1FD92	Vibrio_phage	7.4e-06	44.6
WP_158164849.1\|331826_332345_+	glycoside hydrolase family protein	A0A1V0E844	Vibrio_phage	4.0e-67	71.3
WP_158164284.1\|332406_332757_+\|lysis	lysis protein	A0A1V0E843	Vibrio_phage	9.9e-22	52.3
WP_158164285.1\|333245_333815_+\|terminase	terminase small subunit	G0ZND3	Cronobacter_phage	4.5e-64	68.6
WP_158164286.1\|333801_335280_+	DNA-packaging protein	G0ZND4	Cronobacter_phage	2.0e-244	83.5
WP_158164287.1\|335509_336895_+	DUF1073 domain-containing protein	I6R9A1	Salmonella_phage	3.3e-153	60.9
WP_158164288.1\|336857_337799_+\|head	phage head morphogenesis protein	H6WRT1	Salmonella_phage	1.3e-87	55.0
WP_158164850.1\|337879_339145_+	hypothetical protein	G0ZND7	Cronobacter_phage	3.1e-166	70.5
WP_158164289.1\|339161_339590_+	hypothetical protein	A0A1V0E5Q8	Salmonella_phage	2.0e-40	61.3
WP_158164290.1\|339603_340674_+	hypothetical protein	A0A1V0E5P6	Salmonella_phage	3.1e-122	59.7
WP_158164291.1\|340685_340955_+	hypothetical protein	A0A1V0E5P8	Salmonella_phage	1.9e-12	50.0
WP_158164292.1\|340998_341394_+	hypothetical protein	J7HX89	Pseudomonas_phage	3.0e-43	64.6
WP_158164293.1\|341393_341714_+	hypothetical protein	J7I4I8	Pseudomonas_phage	5.9e-37	67.0
WP_158164294.1\|341713_341983_+	hypothetical protein	NA	NA	NA	NA
WP_158164851.1\|342264_342822_+	hypothetical protein	M4QC23	Vibrio_phage	8.0e-66	68.3
WP_158164295.1\|342825_343263_+	hypothetical protein	A0A125RNM8	Pseudomonas_phage	7.7e-40	55.2
WP_158164296.1\|343255_343618_+	hypothetical protein	J7I407	Pseudomonas_phage	3.1e-26	45.5
WP_158164297.1\|343628_344366_+	Ig domain-containing protein	A0A125RNN0	Pseudomonas_phage	2.1e-82	67.8
WP_158164298.1\|344425_345031_+	glycoprotein	H2BD90	Pseudomonas_phage	4.1e-55	54.3
WP_158164299.1\|345098_345632_+	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_158164300.1\|345692_347978_+	hypothetical protein	J7HXG0	Pseudomonas_phage	5.5e-36	51.2
WP_158164301.1\|347983_348340_+\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	2.0e-17	42.2
WP_158164302.1\|348336_349071_+\|tail	phage minor tail protein L	A0A2R3UA90	Siphoviridae_environmental_samples	5.4e-62	51.9
WP_158164303.1\|349835_350396_+\|tail	tail assembly protein	C7BGD3	Burkholderia_phage	3.1e-41	50.5
WP_158164304.1\|350392_352480_+	hypothetical protein	Q3HQU5	Burkholderia_phage	1.5e-189	50.0
WP_158164305.1\|352476_353847_+	DUF1983 domain-containing protein	A0A1V0E886	Vibrio_phage	2.5e-44	30.0
WP_148497416.1\|353849_354032_+	hypothetical protein	A0A1U9GM54	Vibrio_phage	5.2e-06	67.6
WP_158164306.1\|354013_355384_+	hypothetical protein	R9TRI6	Vibrio_phage	1.1e-42	34.8

DBSCAN-SWA_2

1406871 : 1414075

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158164728.1\|1406871_1408185_-	PAS domain S-box protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-17	44.4
WP_014257838.1\|1408423_1409224_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.0e-53	47.0
WP_158164729.1\|1409489_1410395_+	NAD-binding protein	A0A077SLF7	Escherichia_phage	3.9e-110	73.3
WP_158164730.1\|1410397_1411654_+	hypothetical protein	A0A077SLJ7	Escherichia_phage	1.9e-131	60.0
WP_014257841.1\|1411650_1412283_+	aldolase	A0A077SK32	Escherichia_phage	4.0e-69	62.1
WP_158164731.1\|1412282_1413059_+	TIM barrel protein	NA	NA	NA	NA
WP_158164732.1\|1413103_1414075_+	NAD-dependent epimerase/dehydratase family protein	A0A0G3FXV3	Raccoon_poxvirus	9.6e-06	28.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP046853

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

93150 : 104297

uncultured_Mediterranean_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004723832.1\|93150_93918_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.5e-67	52.4
WP_158108062.1\|93910_94537_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.7e-35	51.5
WP_158164945.1\|94536_95472_+	murein hydrolase activator NlpD	I3PV79	Clostridium_phage	3.0e-12	31.7
WP_004723838.1\|95544_96534_+	RNA polymerase sigma factor RpoS	F4YCU2	Synechococcus_phage	1.3e-34	34.5
WP_004723840.1\|96602_99164_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	1.5e-34	23.6
WP_158164946.1\|99248_99743_+	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	3.5e-28	48.7
WP_004723845.1\|99909_100962_+	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	6.3e-112	60.7
WP_004723847.1\|101056_101527_+	recombination regulator RecX	NA	NA	NA	NA
WP_158164947.1\|101714_104297_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.9e-77	38.4

DBSCAN-SWA_2

313591 : 320635

Faustovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004729418.1\|313591_314806_+	IscS subfamily cysteine desulfurase	A0A0H3TPH2	Faustovirus	6.3e-31	30.2
WP_004729416.1\|314842_315226_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	9.1e-53	76.6
WP_004729414.1\|315285_315609_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	5.5e-27	54.2
WP_055465966.1\|315675_316191_+	co-chaperone HscB	NA	NA	NA	NA
WP_158164995.1\|316212_318066_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.1e-111	40.5
WP_004729409.1\|318079_318418_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA
WP_004729407.1\|318473_318668_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA
WP_055465968.1\|318844_320137_+	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	1.7e-34	34.1
WP_004729403.1\|320203_320635_+	nucleoside-diphosphate kinase	K7YW26	Megavirus	4.4e-19	38.3

DBSCAN-SWA_3

1037318 : 1103034

Vibrio_phage(26.32%)

tail,capsid,terminase,plate,integrase,tRNA,portal,head

attL 1066905:1066933|attR 1103155:1103183

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158165207.1\|1037318_1038722_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_158165208.1\|1038718_1040530_+	selenocysteine-specific translation elongation factor	A0A2K9KZ60	Tupanvirus	3.7e-11	26.0
WP_014205182.1\|1040808_1041414_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_158165209.1\|1041416_1043348_+	hydrogenase 4 subunit B	NA	NA	NA	NA
WP_004726129.1\|1043348_1044302_+	respiratory chain complex I subunit 1 family protein	NA	NA	NA	NA
WP_086027842.1\|1044335_1046051_+	hydrogenase large subunit	NA	NA	NA	NA
WP_158165210.1\|1046058_1046637_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_158165211.1\|1046633_1047452_+	NADH-quinone oxidoreductase subunit NuoB	NA	NA	NA	NA
WP_004726125.1\|1047438_1047873_+	formate hydrogenlyase maturation protein HycH	NA	NA	NA	NA
WP_004726124.1\|1047869_1048325_+	hydrogenase maturation peptidase HycI	NA	NA	NA	NA
WP_004726123.1\|1048564_1049110_+	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_081454197.1\|1049137_1051282_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA
WP_158165212.1\|1051357_1053415_+	AAA domain-containing protein	NA	NA	NA	NA
WP_158165213.1\|1053469_1054315_+	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA
WP_081454196.1\|1054427_1055009_+	HupE/UreJ family protein	NA	NA	NA	NA
WP_158165214.1\|1055021_1057322_+	carbamoyltransferase HypF	NA	NA	NA	NA
WP_004726118.1\|1057391_1057649_+	HypC/HybG/HupF family hydrogenase formation chaperone	NA	NA	NA	NA
WP_158165215.1\|1057645_1058797_+	hydrogenase formation protein HypD	NA	NA	NA	NA
WP_158166191.1\|1058798_1059791_+	hydrogenase expression/formation protein HypE	NA	NA	NA	NA
WP_004726115.1\|1059799_1060141_+	hydrogenase maturation nickel metallochaperone HypA	NA	NA	NA	NA
WP_158165216.1\|1060142_1061282_+	hydrogenase nickel incorporation protein HypB	NA	NA	NA	NA
WP_158165217.1\|1061322_1061688_+	hypothetical protein	NA	NA	NA	NA
WP_158165218.1\|1061754_1063014_+	sulfurtransferase	NA	NA	NA	NA
WP_158165219.1\|1063142_1064186_-	selenide, water dikinase SelD	NA	NA	NA	NA
WP_158165220.1\|1064682_1065375_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_004726107.1\|1065366_1066377_-	GGDEF domain-containing protein	NA	NA	NA	NA
1066905:1066933	attL	NA	NA	NA	NA
WP_158165221.1\|1067000_1068887_-	hypothetical protein	NA	NA	NA	NA
WP_075990070.1\|1068915_1069023_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_075990071.1\|1069058_1069346_-\|tail	phage tail assembly protein	R4JJY8	Burkholderia_phage	1.6e-06	40.7
WP_158166192.1\|1069329_1070037_-	hypothetical protein	NA	NA	NA	NA
WP_061055511.1\|1070047_1070413_-	hypothetical protein	NA	NA	NA	NA
WP_158165222.1\|1070416_1071550_-\|tail	phage tail protein	C9DGP7	Escherichia_phage	2.6e-47	38.7
WP_020432118.1\|1071546_1071729_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_158165223.1\|1071729_1072266_-	virion morphogenesis protein	NA	NA	NA	NA
WP_158146632.1\|1072262_1072727_-\|tail	phage tail protein	NA	NA	NA	NA
WP_158125652.1\|1072726_1073176_-\|head	head completion/stabilization protein	NA	NA	NA	NA
WP_158165224.1\|1073284_1074322_-\|capsid	phage major capsid protein, P2 family	A0A0U4K5I9	Pseudomonas_phage	1.1e-63	41.4
WP_158165225.1\|1074364_1075177_-\|capsid	phage capsid protein	A0A2H4J928	uncultured_Caudovirales_phage	4.4e-20	44.3
WP_158165226.1\|1075347_1077072_+\|terminase	terminase	E5E3X0	Burkholderia_phage	2.5e-113	41.6
WP_158165227.1\|1077082_1078039_+\|portal	phage portal protein	A0A0M3LS06	Mannheimia_phage	2.5e-59	42.8
WP_158165228.1\|1078060_1078654_-	cell filamentation protein Fic	S4TP71	Salmonella_phage	1.6e-08	28.8
WP_158165229.1\|1078952_1079570_-	KilA-N domain-containing protein	A0A0P0ZCS0	Stx2-converting_phage	2.7e-22	58.7
WP_158165230.1\|1079992_1080904_+	hypothetical protein	NA	NA	NA	NA
WP_004726819.1\|1081614_1081866_-	hypothetical protein	A0A1D9C9R8	Salinivibrio_phage	1.2e-08	45.2
WP_004726817.1\|1081856_1082087_-	hypothetical protein	NA	NA	NA	NA
WP_158165231.1\|1082097_1082514_-	glycoside hydrolase family protein	A0A1Q1PW74	Pseudoalteromonas_phage	3.2e-27	50.0
WP_158165232.1\|1082629_1083055_-	hypothetical protein	NA	NA	NA	NA
WP_158165233.1\|1084491_1085022_-	hypothetical protein	NA	NA	NA	NA
WP_158165234.1\|1085003_1086050_-	hypothetical protein	A0A1E1GE19	Vibrio_phage	6.9e-10	24.5
WP_158165235.1\|1086046_1086433_-	hypothetical protein	NA	NA	NA	NA
WP_158165236.1\|1086429_1087005_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_158165237.1\|1086997_1087936_-\|tail	phage tail protein	NA	NA	NA	NA
WP_158165238.1\|1087932_1089123_-	hypothetical protein	NA	NA	NA	NA
WP_158165239.1\|1089908_1090265_-	hypothetical protein	A0A1S6KZW3	Salmonella_phage	2.9e-13	38.9
WP_004726797.1\|1090513_1090765_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_158165240.1\|1090774_1093405_-	replication endonuclease	A0A166YHE2	Vibrio_phage	7.4e-295	59.0
WP_041943172.1\|1093447_1093828_+	hypothetical protein	NA	NA	NA	NA
WP_075990099.1\|1093963_1094191_-	hypothetical protein	U3PIK2	Vibrio_phage	6.6e-27	73.3
WP_158165241.1\|1094172_1094640_-	DUF3850 domain-containing protein	A0A0A8WI22	Clostridium_phage	8.9e-10	38.6
WP_047462999.1\|1094636_1094933_-	hypothetical protein	NA	NA	NA	NA
WP_004726788.1\|1095005_1095338_-	hypothetical protein	NA	NA	NA	NA
WP_004726786.1\|1095347_1095887_-	phage regulatory CII family protein	A0A2I7RNI1	Vibrio_phage	2.0e-53	57.0
WP_158165242.1\|1095944_1096403_-	hypothetical protein	NA	NA	NA	NA
WP_158165243.1\|1096554_1097280_+	peptidase	M4MB93	Vibrio_phage	2.4e-22	28.4
WP_158165244.1\|1097281_1098259_+	HipA-like protein	NA	NA	NA	NA
WP_158165245.1\|1098255_1098999_+	hypothetical protein	NA	NA	NA	NA
WP_158165246.1\|1099165_1099666_-	hypothetical protein	NA	NA	NA	NA
WP_158165247.1\|1099699_1099846_-	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_158165248.1\|1099812_1100643_-	DUF3825 domain-containing protein	NA	NA	NA	NA
WP_158165249.1\|1100787_1101753_-	hypothetical protein	NA	NA	NA	NA
WP_061056067.1\|1102065_1103034_+\|integrase	tyrosine-type recombinase/integrase	A0A0F7LBR0	Escherichia_phage	6.0e-85	49.7
1103155:1103183	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2146960 : 2153528

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004724909.1\|2146960_2147431_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.9e-31	47.3
WP_004724911.1\|2147623_2148733_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	7.0e-61	39.8
WP_014204552.1\|2148774_2149431_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.1e-33	38.0
WP_158165650.1\|2149433_2150543_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.1e-42	34.0
WP_014204550.1\|2150556_2151006_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_004724920.1\|2151108_2152359_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-95	47.9
WP_004724922.1\|2152370_2153528_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	2.6e-66	42.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046852

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP046853

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection