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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043849 Micrococcus luteus strain NCCP 15687 chromosome, complete genome 1 crisprs WYL,csa3,DEDDh,DinG,cas3 0 0 186 0

Results visualization

1. NZ_CP043849
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043849_1 1759216-1759316 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 10546 5 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_2 36378 : 40824 3 Tupanvirus(33.33%) NA NA
DBSCAN-SWA_3 45727 : 46933 1 Yellowstone_lake_mimivirus(100.0%) NA NA
DBSCAN-SWA_4 53090 : 54266 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_5 58180 : 64925 6 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_6 69325 : 70870 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_7 89380 : 91677 3 Yellowstone_lake_phycodnavirus(50.0%) protease NA
DBSCAN-SWA_8 97898 : 99625 3 Turbot_reddish_body_iridovirus(50.0%) NA NA
DBSCAN-SWA_9 102714 : 106763 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_10 116161 : 121032 5 Paenibacillus_phage(33.33%) NA NA
DBSCAN-SWA_11 129450 : 131103 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_12 134552 : 139812 4 Mycobacterium_phage(50.0%) tRNA NA
DBSCAN-SWA_13 145748 : 146643 1 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_14 152607 : 153342 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_15 166680 : 168561 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_16 180295 : 182012 2 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_17 193818 : 195636 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_18 212190 : 212877 1 Saccharomonospora_phage(100.0%) NA NA
DBSCAN-SWA_19 216756 : 224575 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_20 242212 : 245051 2 Corynebacterium_phage(50.0%) transposase NA
DBSCAN-SWA_21 253009 : 255635 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_22 268370 : 271250 4 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_23 283967 : 287975 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_24 303235 : 304579 1 Serratia_phage(100.0%) tRNA NA
DBSCAN-SWA_25 317600 : 320321 2 uncultured_phage(50.0%) NA NA
DBSCAN-SWA_26 325135 : 328110 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_27 338389 : 339539 1 Leptospira_phage(100.0%) transposase NA
DBSCAN-SWA_28 343267 : 344803 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_29 351553 : 354914 2 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_30 358083 : 359994 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_31 386468 : 390065 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_32 410996 : 419158 6 Mycoplasma_phage(33.33%) NA NA
DBSCAN-SWA_33 432233 : 434837 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_34 442234 : 442717 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_35 448139 : 449612 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_36 471856 : 479116 4 uncultured_Mediterranean_phage(66.67%) tRNA NA
DBSCAN-SWA_37 485469 : 491065 3 Bacillus_virus(50.0%) tRNA NA
DBSCAN-SWA_38 498872 : 503036 4 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_39 507752 : 511482 4 Abalone_herpesvirus(33.33%) NA NA
DBSCAN-SWA_40 516411 : 518919 1 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_41 525885 : 527745 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_42 531676 : 534682 3 Yellowstone_lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_43 540374 : 541238 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_44 545762 : 546155 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_45 550394 : 551642 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_46 556796 : 557855 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_47 563191 : 569820 5 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_48 579281 : 581036 1 Lymphocystis_disease_virus(100.0%) NA NA
DBSCAN-SWA_49 585046 : 586315 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_50 597528 : 605035 4 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_51 609413 : 618593 10 Pithovirus(25.0%) NA NA
DBSCAN-SWA_52 622294 : 623230 1 Cedratvirus(100.0%) NA NA
DBSCAN-SWA_53 626392 : 632955 4 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_54 637619 : 655458 13 Bacillus_thuringiensis_phage(12.5%) NA NA
DBSCAN-SWA_55 662301 : 663003 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_56 667305 : 670119 1 Listeria_phage(100.0%) NA NA
DBSCAN-SWA_57 690636 : 692187 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_58 698635 : 708341 10 Orpheovirus(33.33%) transposase NA
DBSCAN-SWA_59 714562 : 715147 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_60 732642 : 736341 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_61 739584 : 743293 5 Pseudomonas_phage(25.0%) NA NA
DBSCAN-SWA_62 746631 : 752243 5 Mycobacterium_phage(40.0%) NA NA
DBSCAN-SWA_63 757324 : 758647 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_64 769903 : 772532 2 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_65 779497 : 785462 4 Anguillid_herpesvirus(50.0%) tRNA NA
DBSCAN-SWA_66 790066 : 792164 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_67 797413 : 804351 6 Agrobacterium_phage(50.0%) protease,tRNA NA
DBSCAN-SWA_68 816414 : 816963 1 Arthrobacter_phage(100.0%) NA NA
DBSCAN-SWA_69 823683 : 827003 3 Gordonia_phage(66.67%) NA NA
DBSCAN-SWA_70 831506 : 832148 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_71 835486 : 842147 7 Agrobacterium_phage(33.33%) NA NA
DBSCAN-SWA_72 855711 : 856752 1 Rhodococcus_phage(100.0%) NA NA
DBSCAN-SWA_73 860669 : 861422 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_74 868900 : 870082 1 uncultured_phage(100.0%) NA NA
DBSCAN-SWA_75 873507 : 876592 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_76 885876 : 887121 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_77 891362 : 894888 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_78 910165 : 911632 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_79 925334 : 929470 2 Klosneuvirus(50.0%) tRNA NA
DBSCAN-SWA_80 944747 : 951384 4 Pelagibacter_phage(50.0%) NA NA
DBSCAN-SWA_81 955794 : 963007 6 Bacillus_virus(33.33%) NA NA
DBSCAN-SWA_82 975980 : 976715 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_83 988069 : 989266 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_84 999232 : 1000939 2 Planktothrix_phage(50.0%) transposase NA
DBSCAN-SWA_85 1012594 : 1013413 1 Pithovirus(100.0%) NA NA
DBSCAN-SWA_86 1017937 : 1019419 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_87 1024539 : 1025256 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_88 1030450 : 1030966 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_89 1042001 : 1045001 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_90 1060219 : 1066322 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_91 1071534 : 1072599 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_92 1084722 : 1086042 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_93 1089102 : 1201736 105 Streptococcus_phage(15.79%) protease,tRNA,holin,transposase,integrase attL 1148530:1148589|attR 1189666:1190610
DBSCAN-SWA_94 1205659 : 1218575 10 Pandoravirus(33.33%) NA NA
DBSCAN-SWA_95 1234116 : 1235499 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_96 1249861 : 1252255 1 Sphingobium_phage(100.0%) NA NA
DBSCAN-SWA_97 1266175 : 1267906 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_98 1285118 : 1294949 9 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_99 1298705 : 1299575 1 Sphingomonas_phage(100.0%) NA NA
DBSCAN-SWA_100 1313813 : 1314794 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_101 1319876 : 1325544 4 Erysipelothrix_phage(50.0%) NA NA
DBSCAN-SWA_102 1329614 : 1343035 12 Streptococcus_phage(20.0%) NA NA
DBSCAN-SWA_103 1350761 : 1353831 3 Vibrio_phage(50.0%) protease NA
DBSCAN-SWA_104 1367246 : 1372738 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_105 1375962 : 1377561 1 Amsacta_moorei_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_106 1388598 : 1389360 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_107 1395636 : 1400661 4 Anomala_cuprea_entomopoxvirus(33.33%) NA NA
DBSCAN-SWA_108 1405073 : 1406366 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_109 1409659 : 1412356 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_110 1440389 : 1441583 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_111 1446068 : 1453503 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_112 1457075 : 1469253 10 Bacillus_phage(60.0%) NA NA
DBSCAN-SWA_113 1493890 : 1494682 1 Brazilian_cedratvirus(100.0%) NA NA
DBSCAN-SWA_114 1498100 : 1509092 12 Bacillus_phage(40.0%) tRNA NA
DBSCAN-SWA_115 1532794 : 1533583 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_116 1558729 : 1560073 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_117 1566713 : 1569369 2 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_118 1586316 : 1589748 1 Gordonia_phage(100.0%) NA NA
DBSCAN-SWA_119 1599673 : 1600114 1 Streptomyces_phage(100.0%) NA NA
DBSCAN-SWA_120 1603131 : 1604379 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_121 1612271 : 1614782 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_122 1617918 : 1618950 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_123 1631303 : 1641695 8 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_124 1666032 : 1672202 6 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_125 1677802 : 1678672 1 Anomala_cuprea_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_126 1697286 : 1700592 5 Brevibacillus_phage(50.0%) NA NA
DBSCAN-SWA_127 1714689 : 1715610 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_128 1718904 : 1720653 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_129 1729569 : 1731072 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_130 1734385 : 1740486 6 Brochothrix_phage(33.33%) NA NA
DBSCAN-SWA_131 1744764 : 1746012 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_132 1749330 : 1750659 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_133 1753894 : 1755130 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_134 1759127 : 1759727 1 Propionibacterium_phage(100.0%) NA NA
DBSCAN-SWA_135 1764062 : 1769342 4 Stenotrophomonas_phage(33.33%) tRNA NA
DBSCAN-SWA_136 1774247 : 1775670 2 Orpheovirus(50.0%) NA NA
DBSCAN-SWA_137 1779625 : 1780573 1 Natrialba_phage(100.0%) NA NA
DBSCAN-SWA_138 1786521 : 1794713 5 Bacillus_virus(66.67%) NA NA
DBSCAN-SWA_139 1797818 : 1804493 6 Micromonas_pusilla_virus(25.0%) NA NA
DBSCAN-SWA_140 1812021 : 1812552 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_141 1817143 : 1819198 1 Cannes_8_virus(100.0%) NA NA
DBSCAN-SWA_142 1836242 : 1837580 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_143 1847951 : 1848791 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_144 1858532 : 1862594 4 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_145 1868882 : 1874604 4 Hokovirus(33.33%) protease NA
DBSCAN-SWA_146 1888951 : 1899554 8 Klosneuvirus(20.0%) tRNA NA
DBSCAN-SWA_147 1905484 : 1909737 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_148 1920662 : 1922408 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_149 1929010 : 1930882 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_150 1936179 : 1938248 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_151 1950888 : 1951530 1 Yersinia_phage(100.0%) NA NA
DBSCAN-SWA_152 1955746 : 1957135 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_153 1961001 : 1964639 2 Cedratvirus(50.0%) NA NA
DBSCAN-SWA_154 1971719 : 1976455 5 Catovirus(33.33%) transposase NA
DBSCAN-SWA_155 1980982 : 1982353 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_156 1989269 : 1991474 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_157 1996883 : 1999190 1 Microbacterium_phage(100.0%) NA NA
DBSCAN-SWA_158 2011407 : 2012421 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_159 2018646 : 2087367 59 Corynebacterium_phage(30.0%) transposase,tRNA NA
DBSCAN-SWA_160 2091004 : 2095703 4 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_161 2104837 : 2112269 4 Bodo_saltans_virus(33.33%) NA NA
DBSCAN-SWA_162 2128996 : 2130166 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_163 2145710 : 2146337 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_164 2154707 : 2155388 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_165 2159567 : 2161064 1 Microcystis_phage(100.0%) NA NA
DBSCAN-SWA_166 2199010 : 2200264 1 Corynebacterium_phage(100.0%) transposase NA
DBSCAN-SWA_167 2204289 : 2219149 8 Erysipelothrix_phage(40.0%) NA NA
DBSCAN-SWA_168 2225130 : 2225832 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_169 2238955 : 2239159 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_170 2273322 : 2273904 1 Saccharomonospora_phage(100.0%) NA NA
DBSCAN-SWA_171 2291245 : 2294990 3 Acanthamoeba_polyphaga_mimivirus(50.0%) NA NA
DBSCAN-SWA_172 2300629 : 2301433 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_173 2305435 : 2308030 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_174 2312895 : 2322194 8 Bacillus_phage(20.0%) transposase NA
DBSCAN-SWA_175 2327281 : 2333203 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_176 2336634 : 2337135 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_177 2342765 : 2346971 2 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_178 2351650 : 2354248 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_179 2357856 : 2360691 1 Acanthamoeba_polyphaga_mimivirus(100.0%) NA NA
DBSCAN-SWA_180 2365733 : 2366987 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_181 2379319 : 2380720 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_182 2385127 : 2386618 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_183 2408917 : 2410702 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_184 2414204 : 2419918 4 Pandoravirus(50.0%) NA NA
DBSCAN-SWA_185 2424360 : 2425774 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_186 2433518 : 2434550 1 Ostreococcus_tauri_virus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage