CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047024	Paraglaciecola sp. L1A13 chromosome, complete genome	2 crisprs	DinG,cas3,DEDDh,csa3,WYL,Cas9_archaeal	0	0	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047024_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047024_1

256049-256308

Orphan

Consensus_repeat	Method
TTATCATGACACCCATGATAATT	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP047024_1

>merge|NZ_CP047024|1|256049-256308|CRISPRCasFinder
TTATTATGACACCCATGTTAACTGGCCTTATCAAAAGCACATCCTTATCATGACACCCATGATAATTCTCGCCTAGAGTTGGCCTGTATTTGACTCTCTGGCGATAGCGTTTTGTCAGAATTTTTATCATGACACCCATGTTAATTAGTCAGAGTCAGGTATTGCTATTGAGGGGCATCGTTATCATGACACCCATGTTAATGTCGCCCATGTAAATGCCAATGGAAGACAAGCTAATTATCATGACACCCATAATAAAT

>NZ_CP047024|1|1|256049-256308|CRISPRCasFinder
TTATTATGACACCCATGTTAACT	GGCCTTATCAAAAGCACATCC
TTATCATGACACCCATGATAATT	CTCGCCTAGAGTTGGCCTGTATTTGACTCTCTGGCGATAGCGTTTTGTCAGAATTT
TTATCATGACACCCATGTTAATT	AGTCAGAGTCAGGTATTGCTATTGAGGGGCATCG
TTATCATGACACCCATGTTAATG	TCGCCCATGTAAATGCCAATGGAAGACAAGCTAA
TTATCATGACACCCATAATAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047024.1\|WP_158768352.1\|272474_273488_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224525
NZ_CP047024.1\|WP_158768350.1\|268881_270135_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|234571
NZ_CP047024.1\|WP_158768347.1\|263700_265299_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349922
NZ_CP047024.1\|WP_158768353.1\|273680_274898_+\|D-galactonate-dehydratase-family-protein	unknown	unknown	gnl\|CDD\|237901
NZ_CP047024.1\|WP_158768348.1\|265305_267780_+\|DUF5117-domain-containing-protein	unknown	unknown	gnl\|CDD\|239803
NZ_CP047024.1\|WP_158768349.1\|267902_268757_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP047024.1\|WP_158768338.1\|246886_249583_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158768337.1\|246551_246890_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158768336.1\|239790_245178_+\|DUF87-domain-containing-protein	unknown	unknown	gnl\|CDD\|223510
NZ_CP047024.1\|WP_158768351.1\|270548_271532_-\|transposase	unknown	unknown	unknown
NZ_CP047024.1\|WP_158768343.1\|255450_255753_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372836
NZ_CP047024.1\|WP_158768345.1\|259166_261992_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP047024.1\|WP_158768344.1\|256585_258559_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|236635
NZ_CP047024.1\|WP_158768340.1\|250400_250817_+\|MAPEG-family-protein	unknown	unknown	gnl\|CDD\|376462
NZ_CP047024.1\|WP_158768339.1\|249566_250034_+\|CMP-deaminase	unknown	unknown	gnl\|CDD\|238613
NZ_CP047024.1\|WP_158772087.1\|251601_252696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158768346.1\|262026_263625_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|349922
NZ_CP047024.1\|WP_158768342.1\|255262_255454_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158768341.1\|252695_255266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158772086.1\|245297_246533_+\|DNA-(cytosine-5-)-methyltransferase	unknown	unknown	gnl\|CDD\|223348

Protein	Function_ID	Function_description	E-value
NZ_CP047024.1\|WP_158768352.1\|272474_273488_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.87052e-93
NZ_CP047024.1\|WP_158768350.1\|268881_270135_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP047024.1\|WP_158768347.1\|263700_265299_+\|amidohydrolase	gnl\|CDD\|349922	cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily. Peptidase M20 family, ACY1L2 aminobenzoyl-glutamate utilization protein B (AbgB) subfamily. This group contains mostly bacterial amidohydrolases, including gene products of abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate is a natural end product of folate catabolism, and its utilization is initiated by the abg region gene product, AbgT, by enabling uptake of its into the cell in a concentration-dependent, saturable manner. It is subsequently cleaved by AbgA and AbgB (sometimes referred to as AbgAB).	1.1094e-177
NZ_CP047024.1\|WP_158768353.1\|273680_274898_+\|D-galactonate-dehydratase-family-protein	gnl\|CDD\|237901	PRK15072, PRK15072, D-galactonate dehydratase family protein.	0
NZ_CP047024.1\|WP_158768348.1\|265305_267780_+\|DUF5117-domain-containing-protein	gnl\|CDD\|239803	cd04276, ZnMc_MMP_like_2, Zinc-dependent metalloprotease; MMP_like sub-family 2. A group of bacterial metalloproteinase domains similar to matrix metalloproteinases and astacin.	1.26944e-53
NZ_CP047024.1\|WP_158768349.1\|267902_268757_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.11613e-35
NZ_CP047024.1\|WP_158768345.1\|259166_261992_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.10908e-18
NZ_CP047024.1\|WP_158768336.1\|239790_245178_+\|DUF87-domain-containing-protein	gnl\|CDD\|223510	COG0433, COG0433, HerA helicase [Replication, recombination, and repair].	2.38098e-06
NZ_CP047024.1\|WP_158768343.1\|255450_255753_+\|hypothetical-protein	gnl\|CDD\|372836	pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain binding to HIV. The binding of the LYPxL motif of late HIV p6Gag and EIAV p9Gag to this domain is necessary for viral budding.This domain is generally central between an N-terminal Bro1 domain, pfam03097 and a C-terminal proline-rich domain. The retroviruses thus used this domain to hijack the ESCRT system of the cell.	0.00568434
NZ_CP047024.1\|WP_158768346.1\|262026_263625_+\|amidohydrolase	gnl\|CDD\|349922	cd05673, M20_Acy1L2_AbgB, M20 Peptidase Aminoacylase 1-like protein 2 aminobenzoyl-glutamate utilization protein B subfamily. Peptidase M20 family, ACY1L2 aminobenzoyl-glutamate utilization protein B (AbgB) subfamily. This group contains mostly bacterial amidohydrolases, including gene products of abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate is a natural end product of folate catabolism, and its utilization is initiated by the abg region gene product, AbgT, by enabling uptake of its into the cell in a concentration-dependent, saturable manner. It is subsequently cleaved by AbgA and AbgB (sometimes referred to as AbgAB).	1.47628e-164
NZ_CP047024.1\|WP_158768344.1\|256585_258559_+\|BCCT-family-transporter	gnl\|CDD\|236635	PRK09928, PRK09928, choline transport protein BetT; Provisional.	0
NZ_CP047024.1\|WP_158768340.1\|250400_250817_+\|MAPEG-family-protein	gnl\|CDD\|376462	pfam01124, MAPEG, MAPEG family. This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.	1.64226e-14
NZ_CP047024.1\|WP_158768339.1\|249566_250034_+\|CMP-deaminase	gnl\|CDD\|238613	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the enzyme is allosterically regulated by the ratio of dCTP to dTTP not only in eukaryotic cells but also in T-even phage-infected Escherichia coli, with dCTP acting as an activator and dTTP as an inhibitor.	2.37873e-37
NZ_CP047024.1\|WP_158772086.1\|245297_246533_+\|DNA-(cytosine-5-)-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	3.4306e-64

>NZ_CP047024.1|WP_158768343.1|255450_255753_+|hypothetical-protein
MTEQTKAPFISFKFDVMTFLALCGAMYLAYTAHTANMENTAKLNALLTKYEHTLDAAIAGDEVTLKRYRNNIKKTLDSLSPKERELMLALLKVEREGKAD
>NZ_CP047024.1|WP_158768342.1|255262_255454_+|hypothetical-protein
MMNKVIDFAKEWIADNLILVLLMVAMFVGMQYLFYQQSQALGEAAQQVEVLKLKISLTMEQQK
>NZ_CP047024.1|WP_158768341.1|252695_255266_+|hypothetical-protein
MLAKGAGQVKILVLLGLFVVYVCLELSLNLLLIDMYAKPLEAVFGEYQLTAERLELFGRTLSGFGLALGIISFMPGHIFNILGEAKDTVDTQTEQGINKLGKWVFRPIAFVLLWALIIPSLRIVIDGVVDSTSNEKKLSAVRAIVYKEAYLAESVTIEGFPEFDEIVSDPQRKDLVVALIPSLAYFSGGFNHLIESNLQNMADVFLQNRQEETFSKDALPRIRKFDGIYKAEWASYKKARQDYTEASRRENNFALLEQERNELLNQANERINQHWKVYSDELIKADDFRKDYAENENIVKVYRDIRNKYQSSKCDRECHDFYRAEFAKYLNNLTFEDGERFGVYLQADEVNLTKILKSKYQLMGMFTRGRRAYLHRAYGISEEMEYEQYVQSPVATNVAIAVFTENDVHVAKEWTMNDMRPLRQAITNKYKGRAEALWVKYQDGSSFGGVPEKNLDRVDFARLYEIKVLAKIALGPYYMESFTPSIAESRYKKMWLASQDNISFIKMVTSTAATAAFSPGGSMFQLGKDAVKLAVIPPVSIAASLLAIFLLFIKLGMYLWARSKVYLLVAMGLGVFAFGIPVGKSVMGENSYHGMMVAFAEEFSDVDTFDKTFTVGFGYVLDLENGIFKTYRDFAVVDAVASVVHKKLPRDENGLPVAHSETARFSLRSYDDLAYSMLDFAPEMLGIGEVTAPFDTNITLLKQDMNVGAYLGVRLADNKVAEVSMPNFMQGTDIGLIAEQRLFYQPDWQSLALEYVSNVDDPSYWLQLAQGDIAKETLMQRLEHNMASYLNDMPATLALLNNLNEKGQNNLILLELERSKRYRCFVLGTVTAKMISESIETNTIAYEELPDCKARL
>NZ_CP047024.1|WP_158772087.1|251601_252696_+|hypothetical-protein
MEFFVLSRQYPLLFLLSLFSVVFVSGCAVDKRPDAYSNAITVSSAFPAHGSAKAQYAALQQALLQRNLLIADNGDVLPVMRGMCEADMLYRVTSSNLPPYIGQHQDVFTGFYLDVALVNGSWKVVSTDNDFTQFSSEFDLALLASVLTPRMMPSDEIYIRPQPGVTENSLADLLASVQSLLPVKHTRLVVNSALLEQVEKAGYSAVLENAAARYLYLGDTLSTSAAQDRTFFKLNYTANAELKAFAVSTSPVIACMQAHNFVQPPSKKFISNTKANDLPSVVNVLPSNADFSQLAKQQSLFTSGQYLTINGDVLKYSTYQKLQSGSRCSRLAPSDPLYKYCEDRKQDVSTDYIRRKATMRKQGN
>NZ_CP047024.1|WP_158768340.1|250400_250817_+|MAPEG-family-protein
MFDLAYSAYTAFYLYLVMLLVQWMVATFSKAKQPNAIPGKIDENLSHDSFVFRSHRTFQNTLENSALFVGTVLFAFVLNYQSPVFAICVWTYVIARVVHMVLYYAISTEKNPSPRTYFFLIGLLANVVMLVVVGLRLI
>NZ_CP047024.1|WP_158768339.1|249566_250034_+|CMP-deaminase
MSLIHSKLTSWDQRYFELAQVVGSWSKDRSTKIGCVIVGPHNEIRSTGFNGFPRDADDDLDERHSRPAKYKWTEHAERNAIYNAARAGISLDGCRMYLPWFPCMDCARAIVQSGISELIAFSPNLEDQKWGEDFRFALDLFEECSVNVRFVEIEV
>NZ_CP047024.1|WP_158768338.1|246886_249583_+|hypothetical-protein
MSSLASITVKITKSNGEISGQGWLISNKKIVTCAHVINHSLNRKEYCDVKPTEKDLVTVHYRSSPNSIEMEKVICKVAKWLEPKKNEQGFYSGDVAVLVPCSQGIELELEHDILQVWSEPIAKEHFSTLAFLPTHGRGLSCDGVVGELIGDRFELKPNSLEQAPRQGYSGSPVISNKKVIGIVGSTNKDGKVAYAIPVSAFYGLNIDLIQETKAEQHFDHMKLLLRKLKSKDQRNEASDFELRLNERTNTSLGFINMMVPQLDNYGPNDLTAKQFYSRLQYPNLIRIAASGGSGKSHFLLDLVRNLAHSDCAVFWLNLAKTPNVFEGYENLFDETALNSKFEELKIIKKCKPSAQIYVIADGLNEKQTNKRKVLGCLEKLYNQRSVTVIVGDRLSENLESSEFKQYTMAPLSKSIIASSLNSSSADEKLDTNWEKLLSSPFFLSIYINLSLEKKTHAQYRHELMREYFLNHVFTENKSDETKNKSILAAAKVAYNMYKEHKSPIALEDKWNEAGLDNELMDLLKESGTLIKDDKDYLGFQHQLFHDWLAALHVAENNKLWEKKHFDYISIKKLSIESIIFASEITQKSGKITDFLVALYDWDYRYVLRILADFDSKFDAIPNHIELEFRDAIFALNALRASDIFEHTRQGIKEYLDCYQLMGNSLEINFDSSPDEIICAYKKRYACKPLTNGRMGKFRSVFLSDKIETLKENEQITLMNALLEDPVIGWTASNILRLQTLTSENVLYIIAIFNSMHVYDIKNKQSIIGIRWRIVHLLGSASRHNLARDKLLEVLFDKEEYEWVRFGAARSLMEQASSTKSTEICSEIINQITRNFSSIDSRLIRAEILNTTKLASGVISSSKWKDLVFELVKNGYECLESDSSSEKKNWGKRLNELNS
>NZ_CP047024.1|WP_158768337.1|246551_246890_+|hypothetical-protein
MTQFVKLELDNNKTIFIEATEDVLIEKQEEGEVFASTEDRINNVTANLKEALSPVSGLVSAAVESIKDVAVAPDSIEVEFGLKFSADANVIVSKVSGEVTLKIKAVWKNNDK
>NZ_CP047024.1|WP_158772086.1|245297_246533_+|DNA-(cytosine-5-)-methyltransferase
MSTGTYIDLFSGCGGFSLGLGNAGWKGIFAVEKDPMAFDTFRYNLIDGDKYSHFDWPDWLPKKATTIQTLLEDYIDSLKALKGKVDLIAGGPPCQGFSLAGRRNSSDPRNQLSEQYIKMVKIVSPKYLVLENVRGFNATFKDSKGIAEKQPYSMVVKAKLEKLGYKVFTDYVHSEKYGVPQKRTRFIMIGIRKDICKLDVDPFVVLESLRHDFLKSKKLPKTPISVKAAISDLEHIGANKVYHSGNENTGFKKLDYVLPDKLTTFQKAMRKGINGSKPNGLRIARHRGTTVEKFEYIQQVCRPGLGLTAEQKKVIGMKKQVISVLDPSQPSRTLTTLPDDLLHYSEPRILTVRENARIQSFPDDFKFQGKYTTGGHRRTQECPRYTQVGNAVPPLLGEVLGLTLKKVDLNS
>NZ_CP047024.1|WP_158768336.1|239790_245178_+|DUF87-domain-containing-protein
MNSFYKFLIKEVKDEISALLTNEKDPIRVLFSGLPKNMLEKIFTYLCNGEKQLKISRDNLTKHIPVLLVDSSINNDPQNLNSGRCTNNHLVTVRNTEEGSYFALHAIDDITNLSSETAAERKGISTQHHNNVHEWLEESLILNILNSILSKFHENEQETVSEVIKGALTEAWDGDQRHRDRRAVWTILEDTYNTVSTNPNSLHLYEQLGLPCIEGDEILATLKLPEKISNYFVEYGFHSGLEMMTNELPDEDFELKEALESFIKSISVNCLLASEFHDNPMGNYAKAKEHDESNWWNTLTNKTWGKLLGGFSEPQEYSEIIVTCLDTLYNPISKSHPDVVQNRTSFLISPADEQGEVILEISKSSGNKALQSIATITITDTDVNWEDEVGFLEHDLFLRYHFSSDSLVKPLVYKVINLESFKPQITINCRSATKITPFKFKAKKGKIAKKNNEGHYECQIELNGIGSHTLDLFHTAGLKLDSKMTGFFSSDSNDEVTFKNITPSSKEHAVCLIEADEDCVYEFELDDYDSNVTRKYLISFTVSEFIPKGVSSEFRKLVIESSGGKSALKVDVRQTMLSNFEHWILSDHESFYPVILGPGLKNKWTKPVWNSNPVISDMKIFLDPRPTYDSLASAVPQTYIKSRDILRILLKKYCDNNGDSIESLNFGLLYLDDEFKVAFNSYITEYFKWLNSDYETAIWSDILTVHSEESSNNCLNSIPDAVILSPFHPVRIAWHCNAQRLLEDARKDGVCAPASGVIDPTVFPDCFALPCLNANSSPEYKGFASVRASSDYWSVLWSTDSISNINDEDYESIFGDEFGITIDGIAQGFSTQQVKRTLDDVRQLACAKSTLTISLTSDTTGQSSCNVGVEEWCEENLGIEKDEWSSAGANSLRVYDTRSQKAQPEPAILASLTARSGTNVRWYTKKNNEKIEKRDLAIIDHLKTMNNTFEKHNFNSAVDTTGLFRKSIKHSFSKQNKFLAESRVGHFITSPIDEDGSIKNVLLNTLDVMESSCKEFDLFDSLVFAPNLKTLEDSLFNTNFCAVSSSTIDASCFQMPDQTSLLWDYELPKYSSDQGQSSGFYLLARESDNMHEALKNALIEFQGETPLDKEQSKSLLQEISLRGMPTLKKLTSGGTSSFGEIGMLVALRLLQTEFQNNINCNGLIPVIKDSHINLIIPADIFQPRFDSLRAHLKTGNMERPDLIVISIGLSEGKAKSIRLTPVEVKARSEKMMPEERVNAIKQAKTFADFLEYMQKESQKSELWGLAWREMLSSWIDYGFRIYGEINSVKKKSFEWSKFHESTIISLMSKNIDVEIDKVGRLISLENCLHGEIISSVDKEFKDTIVLSHHSAAALLSDKQETVIKDVFSKVGHWGLLSDVKKVSATTELEVSQDKENQGEQKSPLTPDHEEIPKDVGKESTTNSLGINFKVGESLDRFENKDTTFYPGNTALNNINIGVVGDLGTGKTQLLKSLVYQLVSKPENNRGVAPKVLILDYKRDFSDLDNENCKFISKTDIKVFKPKDLPLNMFNTSDSSAATPWLDRYSFFRDVLSKIFSAQKPLQDNFLKKAVKKCFKEIEGRDPTVYEVFEAYEELVDGKVDTTYTIMSDIIDYEIFESNPDKIKTFESFFDSTIAIDLSGFSDDKIKNMIIVIFLNFYYDYMKKVKKRPFLGESPQTRFIDSYLLVDEAHNIMPYEFPVLSKLLLQGREFGVGVILASQFFSHFKTNKENYMEPIQSWFVHKVPGIKVSDLDRIGLPNSGQSTINRIASLEVFESLCKTLGHNGDFIKGIPFYKLD
>NZ_CP047024.1|WP_158768344.1|256585_258559_+|BCCT-family-transporter
MNPISSSKHLNKIVFLGSSSAIIALLLFALLSPQLADQTFSQLQTIIVDNGSWFYVLTVATILIFVMYLAISRHSQIKLGPDHAEPDYSFVSWLSMLFAAGMGIGLMFFGVAEPLMHFLAPPTATPSTIEAAREAMKMTFFHWGLHAWAIYAVVALILAYFSYRHNLPLTLRSALYPIIGDKIYGWRGNVVDIFAVISTIFGVATSLGLGVLQISSGLNYLFGFPISEPYQLLLIVAITGLAIVSVVSGLDKGIRILSEFNMLLAIGLLVFILLAGPTVFLLQAMLQNTGAYLSDLVRNTFNLFAYDKKDWLGGWTIFYWGWWLAWAPFVGVFIARISKGRTIREFLIGVLLIPSMFTLAWMTIFGNSAIELVLNQGSTQLAKLATDNTPVALFLFLEHFPWSNVISGVAVLMIVVFFVTSCDSGAMVVDMLCSNGQNDTPVWQRIYWAGGVGLVAGILLMAGGLSALQTMTIASALPFAVILLISMYGLIKALRVEEYKRESMTLHAPSGQVNAGSDSWKERLHTIVDFPNKPTVERFVEQTVKQAFDSVAKELTLKQIEANISQSAEAITLTVQHGEDAEFVYAVYPTIHHLPEYGQSTETPVPDSDGEYTYYRADVHLSEGGQNYDIMGWSKLAVINDVIDQYHRHLHFLHLAG
>NZ_CP047024.1|WP_158768345.1|259166_261992_+|TonB-dependent-receptor
MKSPNSTKSMKVTYLAAMISSSLMGSHAFAQESNIEAENLDEIKMESIQVTGSRVARDGYDTPAPITLMTQEDINAYAPGSVAEFVNTMPSVTGSTTASTSSGSLSSGASGIAALNLRALGVGRTLVLFDGQRNVVSASTGEVDTNTFPQSLIKNVEIVTGGASSVYGSDAVSGVVNFILDKEYVGFKSQVEYGETTYGDHENGKVVLTYGSELAGGDGHLLLSGEYYSANGIHDTTRDWAEQGFVGMINPDTSEGSPFYLVDTGIGISNYTPGGLIASGPLEGTYFGVDGAVNQLAYGAVSGQWMQGGDWEYTTSGMLGTNSLAADEERKNLFARFSYMVGGAELYMQGSYAEYEGLSYYINPTSKGVTIYADNAYLPSSVSSQMADLGLASFSLNTSNVDMPASGANNVRDTTRIVLGGNGEFRLSDKFFTWDAYYQYGKTKSDEHMTGTYNTSRLDLATDAIVDPDSGEVVCRSTLTDPSNGCIPLNRLGVGVGSDEALSYVLGQPRRIQEFVQDVAAVNFSTGDIEGWAGPISIAFGAEYRHEQMDGDVDPQYSSGWKYGNYKVTEGSYNVKEAYVETLIPLMDDLDFNGAVRYTDYSTSGGVTTWKTGLTYRPIEDATFRLTRSRDIRAPNLSELYATGTARSNSVTINGASVPMIQNLQGNPTVAPEEADSWGAGVILRPSFIENFSATIDYYEVEIDGIISFVTADDTAEYCVEYGVQKYCDNMIYDASGTLQTINLLYDNLDSMTARGVDYDVTYDFDMGDIFDGGLGGVKLRFLATNYLENIIDNGVTAIDSAGSNAGSTPDWKYRASVSYNLDDMTFNITARGVSDGVLNNSYIECTTNCPVSSAPNYTINDNSVDGKTFFDFYAAKTFTFAEDTDAEFYVSIRNVFDTDPAMVAYPASQGSENRPGYLETNRGLYDVLGREFKLGVRVNM
>NZ_CP047024.1|WP_158768346.1|262026_263625_+|amidohydrolase
MFKQKFVTGILGLSLVVGPLSALASADMTLNERMDAKAELIDAVASKAKDVQVMNDMIFSFGELGFQEFETSAYLTKILNDNGFSIETGISGIPTSWMATWGEGEPVIALGSDIDGIPKASQKPGVAYHDPVIEGAPGHGEGHNSGQVVNIVAAIAVKEYMEKNGLKGTIKIWPGVAEEQLGTKAYYVRDGYFKDVDAVLFSHVSNAFSTSWGAGRGNGLVSVQYDFFGESAHSAGSPWRGRSALDAAELMSVGMNYRREHLRLSQRTHSIIVDGGDQPNVVPPKASIWYFFRETDYPHIKSLWEIGDKMAEGAALMTNTTWESTVLGSAWPQHMNKAIAENAYSNIKLIGMPKWSDDDMTLAKALQKEIGVEPTGLKTEIEVLSDPIDPKKNMGGGSDDIGDVSWQVPTITLRYPANIPNLPGHNWSNSVAMATPIAHKGVLAGAKVQALNLFDLITSDALMESAWDYYKDVQTKDEKYIPLLSAEDTPAIHLNEQIMATYKERMKKFYYDPAKYDTYLEQLGITYPTVKE
>NZ_CP047024.1|WP_158768347.1|263700_265299_+|amidohydrolase
MKLNKLLQFSAMFLSMSMVFEAAATTFTAQQRADAKAQVVAAVDKQKKLAQVMNDTIFSFGELGFQEFETSAYLTKMLKEEGFEIEQGIAGIPTAWVAKWGSGKPVIALGTDLDGIPKASQKPGVAYHEPIIEGAPGHGEGHNSGQVVNIIAAIALKDYMAENDISGTIVLWPGVAEEQLATKAYYVRAGYFNDVDAVLYSHVGSSFGTFYGNPGLSGLVSVKYNFYGESAHSASSPWRGRSALDAVELMSVGLNYRREHLRLSQRIHSVIVDGGDQPNVVPPKASSWYFFREVDYPHIKALWEVGDKVAEGAALMTNTTWDSVVMGSAWPLHSNKPLAYRAYENIKAVGLPEWSDDDLTLAKALQKEIGAEEIGLPQEIMPMVAPPPLDKLTGGGSDDVGDISWVVPTIFMLYPSNIPNLPGHNWSNAVSMATPIAHKGIIAGAKAHAMTMIDLFTDPSLLEEMDDYFTNTQTKDLKYESLLREKDTPQIHLNEDIMGQYRDRMREFYYDAEKYDTYLEQLGIDYPTIKSE
>NZ_CP047024.1|WP_158768348.1|265305_267780_+|DUF5117-domain-containing-protein
MTVIFSKYVDSAGVGIPSFRYRLLLRVIYAAFIMLVLGAFSGVSQAQSRDFTQATKSLTKQPGFIPFYWDADAGKVLMELTEFDSDVLYYVSAATGAGSVELPLDRGILKSMVVHFHKSGPNVLVVQQNLDFRAQGGTPERVNNVDLSFATSVLASLPVIAQSESKHLVDATSLFIRDAADVENGRASKHAQFKFDNNKSGFYPARMKNFTDNTEIETIASFNISKPNIVVKNVLPDSRVLSMRIHHSFLRAPTGYQTRLADSRIGVSKLKFSNLANPINKDTEVSWVTRWRLEKKQPQAMLSEAIKPIVFYLDPAIPDDIREAMKEGTLWWNEAFETAGFKDAVQVKEPEPGMDPMDIRYAWVQWIERDGRGFSMGGTYRDPRTGEILGSKSRLDSHRMRTVASYYKSYVKAATADGKKLAEAEIEFALARQRVLVAHELGHVLGFGHNWASSINDRASVMEYPSPRVKVKDGKLDLSTAFAIGIGEYDKYMVRYAYTPLAKNVEAKGLNSIIEEMHNNGILFVPSTDPRWAWYDDLSSPVKYMDESFEARQIMLAQYGPDMLDEGEPLGHLRDMKLWMVYLHHRWAIEAAQRFIGGMYHEWAVKGDGIMPTQIVPTALQKQLLSKLMLSLSPDELALPESLLVQLTVHPGLNREDMSDDYAFDQLKAARILADLIVTPLLEPNKLSRMVAFEARDPATLTLPQLIETLMQQTWGKKIGKSSGRSALLRVTQSVVLNSLMTAGADVKSSPEVTAMIMMTLSDLAEELEGKKHQDPLTKAHYQQAYRSIRLYLTDPVKYVPSREFLRWGEQPMSRYPAPPGPPL
>NZ_CP047024.1|WP_158768349.1|267902_268757_-|LysR-family-transcriptional-regulator
MKNLSVDFLRSFVTITQTGSYTLCAERLKRTQPAISLQIKKLEDVIGEKLFIRESNRLTLTLAGSKLLEFSMKIISLNDQAMREFGRPQVSGNIRLGIPSEFSTTLMPKIIRRFINTYPEISLEVHCALSKDLLCEPLKNKFDLILSLQEEADSTQEGHIITDQLVWVGSQRFVNNIPEKLPIIAAPSPCLYRKRVTSVLNTHKKNWQIIYTIADLNGIQTAINEDLGITALARSTVPPGLFILPPSPQLPELGQVGVYLMNPQKVRSEAIELLAKTIETQLAI
>NZ_CP047024.1|WP_158768350.1|268881_270135_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSDLNMSLKETDPDLFALLSDEGRRQENHIELIASENYTSKAVMEAQGSKLTNKYAEGYPKKRYYGGCEFADGVETLAIERAKALFSSDYVNVQPHSGSQANAAVYMALLSPGDTILGLSLDHGGHLTHGAKPNFSGKLYNAIQYGLDTSTGLIDYEQVAALAKEHQPKMIVAGFSAYSRVVDWQKFKDIAQSVGAYLFVDMAHVAGLVAAGLYPNPIPIADVVTTTTHKTLRGPRGGMILCKSNPSLEKKFNSLIFPGIQGGPLMHVIAAKAVAFKEASLPSFVTYQQQVIDNAQAMAKVFMQRGFGVVSGGTDNHMFLVDLTAKGLTGKQADEVLGAVNITVNKNTVPNDPQSPFVTSGIRIGTPALTSRGIGSEDAAKLAQWMCDLLDNIEEEHLYNIVRQDVAALTAKYPVYK
>NZ_CP047024.1|WP_158768351.1|270548_271532_-|transposase
MPQSRKSQISLIDTPYYHCVSRCVRRSFLCGIDKYSGQSYEHRRGWVESRLLFLASVFSIDICAYAVMSNHTHIVLHVDKTLAEAWETEAVLTRYHKLHKGTLLTQKYLKGYPLTQGELISFDETVELYRKRLYDISWFMRNLNEYIAREANKEDDCTGRFWEGRFKSQALLDESAVLACMAYVDLNPIRANVASTPEASKNTSIKKRTKALKNKRPQPKALMPFIGSHKEDMPKGITFDLKDYCELVDTTGRYIKDSKSGVIDDKQNPILVRLGLNSVQWLTLTTEFEKHFYYAAGAEQMMHAFKRHTQHQRLRGLDKARLLLKRA
>NZ_CP047024.1|WP_158768352.1|272474_273488_-|substrate-binding-domain-containing-protein
MAKVKLIDVAQLASVSKSTVSQYLNGRFDYMSKETQVRVRAAIKELDYVPNPIARNLKADKTKTIGVIVRDITGFDTSRTIRGVDDYCKAVDYNALIYNTDFDPDTEAKSLEALYQLRVDGIIIASSGKNNQLISDYIKKGMPIVHFQLEHDGSEKNLILSDYRQAAFDATEYLIQLGHKRICFVTQDFKNVKSRNERYIGYASALEKHHIPLDKNLIQYWQRETGFEHSPKSIISSSASPTAFFTQHLAITTELLTHLNQEKISIPDDVSLIGFDEIPMAEFFKVPITVVKQEPYIIGKEAAKLLLENINDKNRHSQKIMISCSITQRQSCSSPKE
>NZ_CP047024.1|WP_158768353.1|273680_274898_+|D-galactonate-dehydratase-family-protein
MKITEVKVFVCSPGRNFVTVKVMTDAGIYGLGDATLNGREMAVVAYLQEHVAPCLIGRNAHDIEDIWQYLYKGVYWRKGAVNMAAVAAIDMALWDIKGKAAGMPVYQLLGGKSRRGVTLYAHASGETIEDTLDKAEEHINQGFKAVRLQCAVPGLNVTYGVLGDKADYFELQGSRPLPPEEEWSTQKYFNMIVELFRHARERFGNNVHLLHDVHSRLTPIESARLGKLLEPYNLLFLEDASIAENQDSYKVIRQHTTTPLAIGETYNTIWDCKDLIQNQLIDYIRVAATHAGGITALRRIADFASIYNVKTAPHGAPDLSPVCFAAHMHLNIWAPNFGIQEFVGFGNAASGRIFKHGIEVKDGVAYVSDAPGLGIEFDEEAAKEYPYKRSYLPVSRLEDGTVWNW

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Crispr_ID: NZ_CP047024_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047024_2

4004211-4004354

Orphan

Consensus_repeat	Method
CGGCAACCGCGTTGTCGCGACTGGTTGCTTACCCAAAAATGTATA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP047024_2

>merge|NZ_CP047024|2|4004211-4004354|CRISPRCasFinder
CGGCAACCGCGTTGTCGCGACTGGTTGCTTACCCAAAAATGTATAGTATTGAAACTTGACTGAATAGTCGAAATTGGAGCGGGAAACGAGATTCGTAACCGGCAACCGCGTTGTCGCGACTGGTCGCTTACCCAAAAATGTATA

>NZ_CP047024|2|2|4004211-4004354|CRISPRCasFinder
CGGCAACCGCGTTGTCGCGACTGGTTGCTTACCCAAAAATGTATA	GTATTGAAACTTGACTGAATAGTCGAAATTGGAGCGGGAAACGAGATTCGTAAC
CGGCAACCGCGTTGTCGCGACTGGTCGCTTACCCAAAAATGTATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047024.1\|WP_158771141.1\|4009392_4009806_-\|MerC-family-mercury-resistance-protein	unknown	unknown	gnl\|CDD\|377004
NZ_CP047024.1\|WP_158771131.1\|3997669_3998635_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293806
NZ_CP047024.1\|WP_158771145.1\|4015038_4016373_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP047024.1\|WP_158772307.1\|3994170_3995358_-\|NnrS-family-protein	unknown	unknown	gnl\|CDD\|377571
NZ_CP047024.1\|WP_158771139.1\|4007679_4008546_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP047024.1\|WP_158771133.1\|4000306_4000753_-\|cyanase	unknown	unknown	gnl\|CDD\|235079
NZ_CP047024.1\|WP_158771138.1\|4006816_4007677_+\|phosphatidylserine-decarboxylase	unknown	unknown	gnl\|CDD\|234591
NZ_CP047024.1\|WP_158771132.1\|3998953_4000255_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|206779
NZ_CP047024.1\|WP_158771136.1\|4004970_4005516_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429
NZ_CP047024.1\|WP_158771140.1\|4008554_4009247_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506
NZ_CP047024.1\|WP_158771142.1\|4010097_4011453_+\|M24-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223085
NZ_CP047024.1\|WP_158772308.1\|3995952_3997536_+\|nitric-oxide-reductase-transcriptional-regulator-NorR	unknown	unknown	gnl\|CDD\|235331
NZ_CP047024.1\|WP_158771135.1\|4002519_4003386_-\|formate/nitrite-transporter-family-protein	unknown	unknown	gnl\|CDD\|376497
NZ_CP047024.1\|WP_158771128.1\|3989894_3992345_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP047024.1\|WP_158771143.1\|4011452_4013219_+\|DUF885-family-protein	unknown	unknown	gnl\|CDD\|377577
NZ_CP047024.1\|WP_158771130.1\|3995448_3995700_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047024.1\|WP_158771144.1\|4013383_4015012_+\|TldD/PmbA-family-protein	unknown	unknown	gnl\|CDD\|223389
NZ_CP047024.1\|WP_158771137.1\|4005628_4006657_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_CP047024.1\|WP_158771129.1\|3992925_3994116_-\|NO-inducible-flavohemoprotein	unknown	unknown	gnl\|CDD\|237337
NZ_CP047024.1\|WP_158771134.1\|4000790_4002533_-\|protein-kinase	unknown	unknown	gnl\|CDD\|270916

Protein	Function_ID	Function_description	E-value
NZ_CP047024.1\|WP_158771141.1\|4009392_4009806_-\|MerC-family-mercury-resistance-protein	gnl\|CDD\|377004	pfam03203, MerC, MerC mercury resistance protein.	7.55049e-26
NZ_CP047024.1\|WP_158771131.1\|3997669_3998635_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293806	cd07720, OPHC2-like_MBL-fold, Pseudomonas pseudoalcaligenes organophosphorus hydrolase C2, and related proteins; MBL-fold metallo hydrolase domain. Pseudomonas pseudoalcaligenes OPHC2 is a thermostable organophosphorus hydrolase which a broad substrate activity spectrum: it hydrolyzes various phosphotriesters, esters, and a lactone. This subgroup also includes Pseudomonas oleovorans PoOPH which exhibits high lactonase and esterase activities, and latent PTE activity. However, double mutations His250Ile/Ile263Trp switch PoOPH into an efficient and thermostable PTE. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	9.43663e-117
NZ_CP047024.1\|WP_158771145.1\|4015038_4016373_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	2.68379e-51
NZ_CP047024.1\|WP_158771137.1\|4005628_4006657_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_CP047024.1\|WP_158771133.1\|4000306_4000753_-\|cyanase	gnl\|CDD\|235079	PRK02866, PRK02866, cyanate hydratase; Validated.	3.79607e-90
NZ_CP047024.1\|WP_158771138.1\|4006816_4007677_+\|phosphatidylserine-decarboxylase	gnl\|CDD\|234591	PRK00044, psd, phosphatidylserine decarboxylase; Reviewed.	0
NZ_CP047024.1\|WP_158771132.1\|3998953_4000255_+\|PAS-domain-S-box-protein	gnl\|CDD\|206779	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain. Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.	3.43074e-41
NZ_CP047024.1\|WP_158771136.1\|4004970_4005516_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	1.09097e-128
NZ_CP047024.1\|WP_158771140.1\|4008554_4009247_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	9.34296e-71
NZ_CP047024.1\|WP_158771142.1\|4010097_4011453_+\|M24-family-metallopeptidase	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	1.23867e-88
NZ_CP047024.1\|WP_158772308.1\|3995952_3997536_+\|nitric-oxide-reductase-transcriptional-regulator-NorR	gnl\|CDD\|235331	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR.	0
NZ_CP047024.1\|WP_158771135.1\|4002519_4003386_-\|formate/nitrite-transporter-family-protein	gnl\|CDD\|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	1.2478e-66
NZ_CP047024.1\|WP_158771128.1\|3989894_3992345_-\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	2.51811e-51
NZ_CP047024.1\|WP_158771129.1\|3992925_3994116_-\|NO-inducible-flavohemoprotein	gnl\|CDD\|237337	PRK13289, PRK13289, NO-inducible flavohemoprotein.	0
NZ_CP047024.1\|WP_158771134.1\|4000790_4002533_-\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.33906e-62
NZ_CP047024.1\|WP_158771144.1\|4013383_4015012_+\|TldD/PmbA-family-protein	gnl\|CDD\|223389	COG0312, TldD, Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only].	7.52569e-94
NZ_CP047024.1\|WP_158771139.1\|4007679_4008546_+\|EamA-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	9.75258e-16
NZ_CP047024.1\|WP_158771143.1\|4011452_4013219_+\|DUF885-family-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	1.00244e-174
NZ_CP047024.1\|WP_158772307.1\|3994170_3995358_-\|NnrS-family-protein	gnl\|CDD\|377571	pfam05940, NnrS, NnrS protein. This family consists of several bacterial NnrS like proteins. NnrS is a putative heme-Cu protein (NnrS) and a member of the short-chain dehydrogenase family. Expression of nnrS is dependent on the transcriptional regulator NnrR, which also regulates expression of genes required for the reduction of nitrite to nitrous oxide, including nirK and nor. NnrS is a haem- and copper-containing membrane protein. Genes encoding putative orthologues of NnrS are sometimes but not always found in bacteria encoding nitrite and/or nitric oxide reductase.	6.90679e-78

>NZ_CP047024.1|WP_158771135.1|4002519_4003386_-|formate/nitrite-transporter-family-protein
MAYLLPAEFVTKMVDAGESKVFMSTRDTLIRGYMAGAILALAAVFAITIAVQTGMFLLGAILFPVGFCMLYLMGFDLLTGVFVLTPLALIDKRPGVTIQGVLRNWGLVFIGNFGGALTVAIMMAFIFTYGFNTDPGAIGKKVASIGEARTLGYAEYGTAGWFTIFIRGMLCNWMVSLGVVGAMISTNVSGKVIAMWMPIFLFFFMGFEHSVVNMFLFPFSLILGGEFSVMDYLVWNEIPTALGNLVGGLAFTGLTLYTTHVRTGPKRNLPYTKTADLASSSVAEHATR
>NZ_CP047024.1|WP_158771134.1|4000790_4002533_-|protein-kinase
MQLAKLTVGQHSIAGLKSINQDYCGWHSTNDAQSRLKGQVLAIADGIGSSSVSQVASKAAVNSFLQDYYATSDAWSVETSARRVMQSINAWLHGYTKQSEFRYDIEKGYVCTFSALVIKGDTAHVFHVGDARVYLLRHGVLEQLSNDHRQYAAQGKSYLSRALGMHPQLDIDYSHLAVCQGDTFILCTDGVHEYLTPGDMLQTVTSTLAIDDEHSANTLAEALVQQALNNGGDDNLTLQVAIVEALIESQHKPITSELTALPLPPMLQAGENFDGYCIIRSLHVSPRSHVYLAEDLSTSQQCVLKTPSVDLSDNDEYLERFCLEEWIGRRIHNPHVLNIPPSLRAKQFIYSVAEYVQGQSLRQWMTDNPKPELEAVRQIIEQIAKGLQAFHRLDMLHQDIRPENIMLDKQGTVKIIDFGSTTVAGLQEVGQGCRNNELLGTALYMAPEYFLGEVGTPRSDIFSLAVLAYHMLSGRFPYHTHVAKTRTRAQQNRLIYQSVRDDNSVLPAWLDATLYKALRVDPFKRYSELSEFVHDLRNPNVDFVRKAKPPIMERNPVAFWQGVASVLLISNLYFIYLFLA
>NZ_CP047024.1|WP_158771133.1|4000306_4000753_-|cyanase
MQSREQVTQAILVAKVQKGITWQQVALDVGQSKEWTTAGCLGQMTFNAQQASIVAKLFDLDENAEAWLQVVPYKGSFTESVPSDPLLYRLYEMINVYGSTIKSLIHEEFGDGIMSAIDFSMDIKREENSAGDRVSIELSGKFLPYKSY
>NZ_CP047024.1|WP_158771132.1|3998953_4000255_+|PAS-domain-S-box-protein
MFFSRAKSKLETPISDSFESSFIRSLERHCATISFSPEGIILDANPLFLSTVGYSLSEIKDQHHRIFCTKEESESRPYQSFWTQLAQGESTNGTFLRKSKDGGDLWLEATYFPVEQNGKIVRIIKIANDITAEKQRLDSQTAIFESLDRSNALIEFTPTGEVISANSNFLQTMGYSSVNDIAGKHHRMFCSEDFYRENPNFWTELANGEFKGGQFNRLTKTGNTVWLEATYNPVLDEQGHVIKVVKIASNVTPRIEQQLATQEAAEIAYSTSMQTAKISQDGAVILQRTVDTSSAIVSSTLTSTDLIEQLNKRSQEISKIVTTISAIADQTNLLALNAAIEAARAGEYGRGFAVVADEVRTLAARTVSSTAGIEQLVTSNSALTQKAKDSIADIHEQSLQSAKQVEEAATIIEEVLTGAIYVSETVNQLRNEN
>NZ_CP047024.1|WP_158771131.1|3997669_3998635_-|MBL-fold-metallo-hydrolase
MKTTNITRRLLLIQGFVVGLTLSFQVLSNEEPERASSAGFYRTLLGQFEITALSDGTVDLPMDKLLHQESNKTQAQLTQVFLSSPTETSVNGYLVNTGDELVLVDTGAGKLYGPTLGKLITSLQAAGYESSDVDHILITHLHADHVGGLARDGKRVFPNATIHADKRDLDFWLSEIEMNKAPDAQKGFFQGAMASLNPYVLDNKVDGFDGSQQIVPGISTDATYGHTPGHTSYHVQSNGQEMWIIGDLIHAPAVQFPHPDITIDFDSNPEEAQKQRSRIFQQVANSKALMAGAHLQFPGLGHVRKVETGFEWIPTNYQRLR
>NZ_CP047024.1|WP_158772308.1|3995952_3997536_+|nitric-oxide-reductase-transcriptional-regulator-NorR
MIELNSTLLLEVALDLANSITSEDRFDRLLSSIRKAINCDAVVLLAYQTDQLKPLAIQGLAPDTLGRRFKLSDHPRLSLICTAEQPVRFPSDSTLADPYDGLLLAQDGDLPVHSCMGLPLYSDEQLMGVLTLDSLQPNAFSNIPERTLQLISALSAATLKTAIQLKVLEQRAQQAQDLVQELTHEALTRDGGELIGKSPSMLALKSDIQLVAGSDYTVLVMGKTGVGKELVARTVHQLSNRREQPLVYLNCASIPETLAESELFGHTKGAFSGAEKERPGKFKLADCGTIFLDEVGELPLSVQSKLLRVLQSGEIQPVGKDRVNIVNVRIVAATNRDLAEEVKLGRFRADLYHRLSVYPIRVPELKDREDDVLLLAGYFLEVTARKLGIRQLKMRPEVQEALLEYSWPGNVRELEHVISRASLKASRNTEQQDIISITPEDLDFERTVSTDAEHDNSLNTDNNNIVSLVQQGLKSMTEAFQKKHITDALNNNNGNWTQAAKQLDMDRANLARLAKRLGIIVEKNIKQ
>NZ_CP047024.1|WP_158771130.1|3995448_3995700_-|hypothetical-protein
MASFEVSNPVTRYSRLFNIANSILAISLGLLLLSIAISYPLSDLFSLGQQIVSHILIIISASVLKVAYVCRCIAQYEQHKAVY
>NZ_CP047024.1|WP_158772307.1|3994170_3995358_-|NnrS-family-protein
MVNNVTGGFGTILFSLAFRAFFLFGTVWAVLAIGVWALWFSGKWTLNFTMPPTLWHAHEMIFGFAACIAAGFLLTAVQTWTGLRSINGLALMGLTLLWFIARVSLLLGDTPESIFLFSVAQFSWWFGVVGFFSYLIIKSKNTANRVLILLLVGMFSLNALFVTMVLKQEYALASHFSQSAIVLLCALITLVGGRVIPFFTARALTQKQYKNPWLDNALFWLSLITTGVFAAQFFADFTLETSGLLIMLGCGHLWRLWRWYHPGIWQVPLLWSLHLAYFAMAIGLLLVSISLLTSMLALKDALHLISISAVSGMILSMMSRVSLGHTGRALKVSVSLSGAFALLLLAGIVRAFSAFTPHVVISWQLSAGLWLTAFVLFLWHYLPVLIRARVDGKPD
>NZ_CP047024.1|WP_158771129.1|3992925_3994116_-|NO-inducible-flavohemoprotein
MLSAHTIATVKSTIPLLESAGVAITDHFYQRMFRLNPELKNIFNMANQANGRQQFALFSAITAYAKNIDNLGVLSEVVERVAQKHTSFFIQPEHYDIVGHHLIETLRELAPDAFTPEVEQAWTEAYGALANIFINREGDLYKQTEQAPGGWLGQRKFTVLSKTPESSLVTSFVLSPVDGKPVIGYKPGQYLGIKVQPKHCEYAEMRQYSLSDKPNSSTYRISVKREQGEVNGLVSNHLHDSVEEGDVLDILPPAGDFFLQHQHLPTVLISAGVGLTPMMSMLEATVDSHPQTPIHFLHACENPEQHSFTQRVAELEKITPELNAYTWYANHAPEQDNVFSGLMSLAPMAQQLPLGSGNFYICGPTGFMSFIKNQLLDLGVKDAQIHYEVFGPHSDL
>NZ_CP047024.1|WP_158771128.1|3989894_3992345_-|TonB-dependent-receptor
MAIAKRFLTKHTSIALAVSATFAPIPSVWAQSADIGIETIEVTATRRAGSLQEAPLNITALTSDTLAEQNIADLDDVARWVPGLTITDQGGRSDSPIIVRGLNTNSSGPSSDGGTVSTYVGEIPLFINMRLNDIQRVEVLIGPQGTLYGAGTLGGAIRYLPKQVELDTTSAEVYGNVSSMNESDSVGAEAGFVFNTPLIDDVLGLRMSLNKLHDPGFIDYNYLVREGGVSIADPDWQDPNDVADNLRSKKDANGEDTLSGRVALRWTPTEDIDATLTYFYQKQEVEGRSIVHYDALSPDNGLGDVIGKYESAYRYVEPREKEDDLLSLELSVDLGFAELVSATGKSSFEAVGQRDQTDLLIRLAYSYEEFPAFSSYTRELDNRDVFTQELRLVSKGDSDLSWIVGAFYNNIDSDGASLEFTPNFDEYAINVWETGGNLREDALEYISVDETEITEKALYGEVSYAVTDQLDITLGARFYQYDLETASDVDLPLLYTAITVEEGADDFRQGDEIILAPLENKADDSGSLFKFNASYQFTADVMGYVTLSEGFRIGGANGVGACNPDSSGDTQEVCALPNEQIYAPDTTTNYELGLKSTWLKNKFHFNMALFNVDWDDAQVTGNTENGQQTILVNAGKANSKGVEMMSRAIFTDELSAYATYAFTKAELTEDVPELFDDSDALDGDRLPGSPEHQFSLGLKYSTEVMGDKLLDVTYGITAQSDVYSKIGLHESGEVISGYALSNVSASLSDEDWTVTLYVDNLFDKYAFSSSRNDLGDIGLAVAPDTNSNRGDLLRYYGHYLERPRTIGLKFNYQFGM
>NZ_CP047024.1|WP_158771136.1|4004970_4005516_-|oligoribonuclease
MTVDAQNLVWIDMEMTGLHPEVDVVLEIATIVTDANLNILAEGPVLAIHQSDDVLNNMNQWCIDTHGKSGLTQRCQKSSINEQTAVAETIRFLEKYVPKGASPLCGNTIGQDRRFMVKYMPELEEYFHYRNIDVSTLKELVKRWKPEVLDGFTKKGVHLALDDIRESIAELVYYRQHIFNI
>NZ_CP047024.1|WP_158771137.1|4005628_4006657_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MSKKPKLTHKQRRQVSNNRTKRLAVPATTPTDDQLEDQRAGRVIGRFGKHADVEDSEGNIHRCHIRRTVISVVCGDEVLFRPGKDGTENISGVIEIVQDRKSVLTRPDFYDGVKPVAANIDQIIIVSSVIPALSLNIIDRYLVASEDVGIEPVILLNKVELLTDAERENVEKQLQIYHNIGYRVVYTSCKTHTGISDLALCLKDKISVFVGQSGVGKSSLINELLPDASEITKEVSDNSGLGQHTTTTAKLLHFPQGGDLIDSPGVREFALWHMPMERLTWGFKEFRDYIGGCKFRDCTHGDDPGCIIRAAAEKGDISMQRYESYHKILSNLDEQRPAHSKV
>NZ_CP047024.1|WP_158771138.1|4006816_4007677_+|phosphatidylserine-decarboxylase
MFDSLKIALQYITPKHLISRLVGKLAAAEAGGLTTALIKLFVKQYNVNMSEAERENPADYSSFNEFFTRALKSDARIICPNAQDVAMPVDGAVSQLGDIRHDNIFQAKGHDYSLTTLLGGKPELATAFKNGKFATVYLSPKDYHRIHMPIDGQLTDMVYVPGDLFSVSPLTAERVPGLFARNERVVAIFSTPKGKMAMVLVGATIVASIETVWAGTVSPPVGKNVVHWQYPSEGEESVFLKKGDELGRFKLGSTIVACFEPNMVEFADYNAGDETRLGDVFATLTK
>NZ_CP047024.1|WP_158771139.1|4007679_4008546_+|EamA-family-transporter
MDPVKKSLWSLHFTVILLGATALFSKIIPLSATDITFGRSIIACLMLFSLVKMSGGKLNLARRKDYLIGIGLGLLMAAHWVSYFAAMQYSSVSVGMIALFTFPVITVLIEPFFEGIRLVWQDVLSAVVVLFGICLIVPEVSFDNDVTLGIIVGVGSAILYALRNLCHRKYFSHYSGSLAMAYQTLVIFFCLSFFITPELFKASSQTYVYLVLLGTFFTAVPHALIATSLQHLRAKTFSLVACMQPLYGVILAILVLDEEPNWQTFVGGLLVISAALYETINTQKLHKK
>NZ_CP047024.1|WP_158771140.1|4008554_4009247_+|glycerophosphodiester-phosphodiesterase
MLVFAHRGASADAPENTLLAVNKALGQDCDGIEIDVHQHGDQLLVIHDHWLHRTTNGQGQLSEYTFEQLQKLDAGLGESIPTLWQVMECVAGRCLLNIEIKGVHDVQLVLDNIEKALHELNFTLDHFIVSSFDHHLLRSIKEHKPDLKIGALTASKPIDYAGFAQSLNAYSVNADVTFVDEAFVLDAKRRGLKIFVYTVDQQADLTKLANWHVDGVFSNGPGRAKAFLAR
>NZ_CP047024.1|WP_158771141.1|4009392_4009806_-|MerC-family-mercury-resistance-protein
MQVIQDKSLLDRLGIWASSLCAVHCLALPILIPLLPLVGASFFAQAWFERIILSLSMIVGFWALLSGFYRYHRQIYPVYSLMLGGIIYWNKNMFGDSYEPFTIAIGAMLIVGAHIVNLKLCRSCHSCDTETTSCSAD
>NZ_CP047024.1|WP_158771142.1|4010097_4011453_+|M24-family-metallopeptidase
MKLTKRAFIKASAAAIATLPLSHTVSAVNTASANPSLGAKTSELPNISSKSIPISKAERVARIKKAQILMTQFNIAAMVLEPGASMDYFTGIQWWRSERLTAVVIPREGEIAVLCPFFEEPSIRESLQVGDDVRVWQEHESPFALIQQILKDRGVQKGRLAFEQSVRYFVLQGTLALMSNMQHTSADPITQGCRMFKSVHEITLMHKANEITLRAYAHVHANLAIGMSQQDVKQLMSSAQTQLGGSGIWTMALFNEASAYPHGSNQAQTIRAGSTILMDCGCAVQGYQSDISRTFVFGEASKKQQQIWQTVRRGQQIAFEKAQLGTPAGAVDDAVRAYYHTQGLGPDYQLPGLSHRTGHGIGMEGHEPVNFVHNEQTPLQVGMCFSDEPGIYIPEEFGVRLEDCLYMTKDGPRWFTTPPDNLEAPIGNVSPLDSVLSAQIPFRLSTKEEAI
>NZ_CP047024.1|WP_158771143.1|4011452_4013219_+|DUF885-family-protein
MKQTTLLNHASSALTKAISTLTLLVISSTAWAGANEDFSTLLDIHWQEANKEKIFFRTDPDGWKPQGKLADFSAQGFARRDAFNQRMLDALDNIDMAQLSAKQQVSYRLFKYERETEANSYQFQDRYFPINFLSGWHTYFAEAPANMAFQSTQDYDQYLVSLADYPRFNQENIDLLAQGVKKGFVQHCETFKDYQQSISTHIVDTPKDSALYEPFTRFPSQFSEAQKNQYAHKGAELIKQAVVPAYAHFYDYFVNDYMTHCRKEPGIASVKGGAEYYAYTANYFTTTDLTPKQIHQLGLDEVERIGKEMNAIIKQVGFEGSNSEFLQFLATDPQFYAQDRQDVLEKTAFITQKMYGKLPSFFATLPRNTFTIKGSASRGAFYMPPPDTRTPGTYFLTSEPAQQPLYNLEALSLHEAVPGHHLQNAIAMELDVPEFRRTLSHSAFTEGWGLYSERLGKEAGFYQDPYSDFGRLGYEMWRAVRLVVDTGIHAFGWSRQQAIDYLGSRTALTQKSTADQIDRYISWPGQALSYKIGELKIRELRSQAESSLKENFDIRQFHDVIIGQGSLPMAVLEDSVNQWIETQQKHDE
>NZ_CP047024.1|WP_158771144.1|4013383_4015012_+|TldD/PmbA-family-protein
MERRDFIKLGSAGMGTLMLPISGTAISADQLLDKPMDVAYKKKLADIALNAAKAKGATYADARIGRYLNQFVTTRETRVENIVNTESAGIGVRVIANGTWGFASTSNMTPDSVAKTAEQAVAVAMANSKFQTTPVQLAPVKGVGDVSWQTPIVKNAMEVPIQDKVNLLLSVNDAAMQNGANFISSRLFLVNEQKYFASTDGSYIDQDIHRLWAPFTATAVGEDGFKQRSALGNPVGMGYEYLDGLEKDKVRIQGANIGYNNSYDMVEDAAAAGKQLQAKLKAKSVEPGKYDLVLDPAHLMLTIHESVGHPLELDRVLGYEANYAGTSFATLDKWKSGKFQYGSDIVNLYADKNQPYTLGNVAYDDEGVKTKEWDLIKDGILVNYQATRDQVHMLGQKESHGCSYSQSWRDVQFQRMSNVSLRPNEKDLSADDVIKNVEKGIYIAGRGSYSIDQQRYNFQFGGQLFYEIKDGKIVDQIEDVAYQSNTQEFWNSCSQLAGKSDYRVGGSFFDGKGQPSQVSAVSHGCPTTRFDSINVINTARNV
>NZ_CP047024.1|WP_158771145.1|4015038_4016373_+|TldD/PmbA-family-protein
MTIITQQHAKELLSKVLKFSKADECECNLESKVGGNIRYARNTVSTSGQESDLILIVQSTFGKRTGTATINEFDNASLEKVVRRSEELAKLAPENEEFMPLFGQQKYAEANTYFDSTANVTPEDRAQAAFDSIDPSKKSKLIAAGFLEDEVLMSAIMNSKGLFAYNTSTNVDFSVTIRTEDGKGSGWSSGNYSDVKLLDTAKLSSIAIQKSKGSADAKEMEPGKYTVILEPAASVDLLQNMMRAFDQRSADEGRSFLSNKVAKGEEGPKNKLGQKMFDERVHIYSDPQHSIAPSAPFAGNGYPLNKIDWIKDGTIQNMPNSPYWAKHTKSEYIPTNRNIIMSGGDQSLEDMIKNTRRGVLVTRLWYIRSLDPQTLLYTGLTRDGTFYIENGKIKYPIKNFRFNESPIIMLNNIEALGEPQRIDGSMIPPMKIRDFTFSSLSDAV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2510934 : 2560877

Shigella_phage(28.57%)

protease,transposase,integrase

attL 2559796:2559811|attR 2564779:2564794

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158769978.1\|2510934_2512176_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_158769979.1\|2512662_2514132_+	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	E3SPS4	Prochlorococcus_phage	3.3e-34	31.7
WP_158769980.1\|2514684_2515491_+	redoxin family protein	NA	NA	NA	NA
WP_158769981.1\|2515525_2515786_-	TIGR03643 family protein	NA	NA	NA	NA
WP_158769982.1\|2517184_2517409_-	hypothetical protein	NA	NA	NA	NA
WP_158769983.1\|2517838_2518144_+	hypothetical protein	NA	NA	NA	NA
WP_158769984.1\|2518794_2519067_-	hypothetical protein	NA	NA	NA	NA
WP_158769985.1\|2519236_2519740_-	hypothetical protein	NA	NA	NA	NA
WP_158772230.1\|2519826_2520222_-	hypothetical protein	NA	NA	NA	NA
WP_158769986.1\|2520831_2521263_-	hypothetical protein	NA	NA	NA	NA
WP_158769987.1\|2521378_2521798_-	hypothetical protein	NA	NA	NA	NA
WP_158769988.1\|2522536_2523316_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-47	43.5
WP_158769989.1\|2523312_2523498_-	hypothetical protein	NA	NA	NA	NA
WP_158769990.1\|2523735_2524602_-	hypothetical protein	NA	NA	NA	NA
WP_158769991.1\|2524771_2525894_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	6.1e-81	57.0
WP_158769992.1\|2525899_2526154_-	hypothetical protein	NA	NA	NA	NA
WP_158769993.1\|2526241_2528011_-	AAA family ATPase	NA	NA	NA	NA
WP_158769994.1\|2528143_2529109_-	hypothetical protein	NA	NA	NA	NA
WP_158769995.1\|2531260_2533111_+	hypothetical protein	NA	NA	NA	NA
WP_158769996.1\|2534242_2535166_+	hypothetical protein	NA	NA	NA	NA
WP_158769997.1\|2536153_2536786_+	hypothetical protein	NA	NA	NA	NA
WP_158769998.1\|2536782_2538084_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_158769999.1\|2538083_2538752_+	hypothetical protein	NA	NA	NA	NA
WP_158770000.1\|2538751_2539633_+	AAA family ATPase	NA	NA	NA	NA
WP_158770001.1\|2539640_2540966_+	hypothetical protein	NA	NA	NA	NA
WP_158770002.1\|2541750_2542176_+	hypothetical protein	NA	NA	NA	NA
WP_158770003.1\|2542323_2542782_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_158770004.1\|2542781_2543270_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_158770005.1\|2543278_2543581_+	metalloregulator ArsR/SmtB family transcription factor	NA	NA	NA	NA
WP_158770006.1\|2544206_2545088_+	universal stress protein	NA	NA	NA	NA
WP_158770007.1\|2545155_2545371_-	hypothetical protein	NA	NA	NA	NA
WP_158770008.1\|2545712_2547308_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	7.7e-37	28.7
WP_158770009.1\|2547606_2548071_+	cytochrome C	NA	NA	NA	NA
WP_158770010.1\|2548195_2549158_+	DnaJ domain-containing protein	A0A1V0SIM1	Klosneuvirus	4.7e-13	49.3
WP_158770011.1\|2549163_2549475_+	chaperone modulatory protein CbpM	NA	NA	NA	NA
WP_158770012.1\|2549526_2550369_-	cation diffusion facilitator family transporter	NA	NA	NA	NA
WP_158770013.1\|2550551_2551769_+	PAS domain S-box protein	A0A1V0SL97	Klosneuvirus	2.6e-16	35.5
WP_158770014.1\|2551779_2552418_+	response regulator	NA	NA	NA	NA
WP_158770015.1\|2552543_2552960_+	response regulator	NA	NA	NA	NA
WP_158770016.1\|2553211_2553634_-	universal stress protein	NA	NA	NA	NA
WP_158770017.1\|2554024_2555113_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_158770018.1\|2555115_2555733_-	hypothetical protein	NA	NA	NA	NA
WP_158770019.1\|2557690_2558155_-	hypothetical protein	NA	NA	NA	NA
WP_158770020.1\|2558259_2559165_-	hypothetical protein	NA	NA	NA	NA
WP_158770021.1\|2559236_2559551_-	hypothetical protein	NA	NA	NA	NA
2559796:2559811	attL	NA	NA	NA	NA
WP_158770022.1\|2559917_2560877_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	7.4e-59	40.5
WP_158770022.1\|2559917_2560877_+\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	7.4e-59	40.5
2564779:2564794	attR	NA	NA	NA	NA

DBSCAN-SWA_2

2837931 : 2846488

uncultured_Caudovirales_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158770239.1\|2837931_2838600_+	BAX inhibitor (BI)-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	8.8e-43	47.9
WP_158770240.1\|2838673_2839063_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	6.5e-14	39.2
WP_158770241.1\|2839059_2839422_+	sulfurtransferase complex subunit TusC	NA	NA	NA	NA
WP_158770242.1\|2839421_2839742_+	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_158770243.1\|2839783_2840122_+	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA
WP_158770244.1\|2840257_2841556_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.9e-92	42.7
WP_158770245.1\|2841566_2841950_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	2.1e-09	34.2
WP_158770246.1\|2841950_2843288_-	AAA family ATPase	G3MBE0	Bacillus_virus	8.9e-87	41.7
WP_158770247.1\|2843287_2843950_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_158770248.1\|2843953_2846488_-	DUF87 domain-containing protein	G1FGP1	Mycobacterium_phage	6.4e-86	49.1

DBSCAN-SWA_3

3253372 : 3309023

uncultured_virus(33.33%)

transposase,tRNA,integrase,protease

attL 3273940:3273955|attR 3306175:3306190

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158770542.1\|3253372_3253786_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_158770543.1\|3253957_3254929_+	choice-of-anchor A family protein	NA	NA	NA	NA
WP_158770544.1\|3255095_3257870_+	PEP-CTERM system TPR-repeat protein PrsT	NA	NA	NA	NA
WP_158770545.1\|3258016_3258292_+	peptidase	NA	NA	NA	NA
WP_158770546.1\|3258291_3258972_+	response regulator	NA	NA	NA	NA
WP_158770547.1\|3258975_3260310_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_158772270.1\|3260335_3262024_-	Mur ligase	NA	NA	NA	NA
WP_158770548.1\|3262045_3264862_-	cyanophycin synthetase	NA	NA	NA	NA
WP_158770549.1\|3265031_3265850_-	cyanophycinase	NA	NA	NA	NA
WP_158770550.1\|3265852_3267025_-	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_158770551.1\|3267290_3268409_-	mechanosensitive ion channel	NA	NA	NA	NA
WP_158770552.1\|3268667_3270584_+	glutathionylspermidine synthase family protein	NA	NA	NA	NA
WP_158770553.1\|3270820_3271900_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_158770554.1\|3272381_3272732_-	hypothetical protein	NA	NA	NA	NA
WP_158770555.1\|3272904_3273252_-	hypothetical protein	NA	NA	NA	NA
WP_158770556.1\|3273393_3273744_-	hypothetical protein	NA	NA	NA	NA
WP_158770557.1\|3273803_3274433_-	hypothetical protein	NA	NA	NA	NA
3273940:3273955	attL	NA	NA	NA	NA
WP_158770558.1\|3274518_3274806_-	hypothetical protein	NA	NA	NA	NA
WP_158772271.1\|3275662_3276601_+\|transposase	transposase	NA	NA	NA	NA
WP_158770559.1\|3277026_3277425_-	hypothetical protein	NA	NA	NA	NA
WP_158770560.1\|3277521_3277854_-	hypothetical protein	NA	NA	NA	NA
WP_158772272.1\|3277946_3278060_-	DUF3265 domain-containing protein	NA	NA	NA	NA
WP_158770561.1\|3278060_3278720_-	hypothetical protein	NA	NA	NA	NA
WP_158770134.1\|3278821_3279172_-	hypothetical protein	NA	NA	NA	NA
WP_158770562.1\|3279262_3279667_-	hypothetical protein	NA	NA	NA	NA
WP_158770563.1\|3279726_3280134_-	hypothetical protein	NA	NA	NA	NA
WP_158770564.1\|3280235_3280460_-	hypothetical protein	NA	NA	NA	NA
WP_158770565.1\|3280582_3281041_-	hypothetical protein	NA	NA	NA	NA
WP_158770566.1\|3281836_3282934_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_158770567.1\|3282930_3283773_-\|integrase	tyrosine-type recombinase/integrase	B3GAN2	uncultured_virus	2.0e-07	26.5
WP_158770568.1\|3284682_3284997_+	DUF1840 family protein	NA	NA	NA	NA
WP_158770569.1\|3286589_3287669_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_158770570.1\|3287868_3288303_+	hypothetical protein	NA	NA	NA	NA
WP_158770571.1\|3288705_3290172_-	hypothetical protein	NA	NA	NA	NA
WP_158770572.1\|3290168_3291404_-	hypothetical protein	NA	NA	NA	NA
WP_158770573.1\|3291434_3292211_-	hypothetical protein	NA	NA	NA	NA
WP_158770574.1\|3292690_3295345_-	TonB-dependent receptor	A0A0P0I887	Acinetobacter_phage	2.2e-36	25.5
WP_158770575.1\|3296551_3297058_-	DUF2059 domain-containing protein	NA	NA	NA	NA
WP_158770576.1\|3297161_3298148_-	DNA topoisomerase IB	A0A0U2TSJ7	Niemeyer_virus	2.5e-33	31.9
WP_158770577.1\|3298380_3299469_-	AI-2E family transporter	NA	NA	NA	NA
WP_158770578.1\|3299662_3300028_+	dihydroneopterin triphosphate 2'-epimerase	NA	NA	NA	NA
WP_158770579.1\|3300045_3300939_+	TIGR01777 family protein	NA	NA	NA	NA
WP_158770580.1\|3301070_3303599_-	FtsX-like permease family protein	NA	NA	NA	NA
WP_158770581.1\|3304359_3305001_+	arylesterase	NA	NA	NA	NA
WP_158770582.1\|3305093_3305258_+	hypothetical protein	NA	NA	NA	NA
WP_158770583.1\|3305386_3306319_-\|tRNA	tRNA dihydrouridine(16) synthase DusC	NA	NA	NA	NA
3306175:3306190	attR	NA	NA	NA	NA
WP_158770584.1\|3306404_3306614_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_158770585.1\|3306793_3307993_+	DUF898 family protein	NA	NA	NA	NA
WP_158770586.1\|3307997_3309023_+\|protease	M48 family metalloprotease	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047024

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection