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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP047073 Pseudomonas syringae pv. tomato strain delta X chromosome, complete genome 1 crisprs csa3,DEDDh,PD-DExK,WYL,cas3,RT,DinG 0 0 18 0

Results visualization

1. NZ_CP047073
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047073_1 3026857-3027004 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 14511 : 76971 51 Leptospira_phage(30.77%) transposase,integrase attL 23242:23301|attR 77766:79727
DBSCAN-SWA_2 215806 : 221852 6 Leptospira_phage(50.0%) transposase NA
DBSCAN-SWA_3 453913 : 508938 57 Bacillus_phage(12.5%) transposase,holin,tRNA,protease NA
DBSCAN-SWA_4 583080 : 642092 55 Pseudomonas_phage(39.13%) tRNA,transposase,tail,bacteriocin,integrase attL 575113:575144|attR 586022:586053
DBSCAN-SWA_5 2252629 : 2271123 23 Pseudomonas_phage(85.0%) tail NA
DBSCAN-SWA_6 2635219 : 2641356 9 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_7 2677987 : 2747771 59 uncultured_Caudovirales_phage(29.41%) transposase NA
DBSCAN-SWA_8 3186069 : 3250807 49 Leptospira_phage(25.0%) transposase,integrase attL 3183446:3183462|attR 3239254:3239270
DBSCAN-SWA_9 3584526 : 3623496 31 Leptospira_phage(62.5%) transposase,protease NA
DBSCAN-SWA_10 3770834 : 3868706 104 uncultured_Caudovirales_phage(62.75%) capsid,tRNA,protease,transposase,plate,head,tail,terminase,integrase,holin,portal attL 3771349:3771367|attR 3845392:3845410
DBSCAN-SWA_11 4066975 : 4114143 48 Leptospira_phage(37.5%) transposase,integrase attL 4073022:4073037|attR 4117635:4117650
DBSCAN-SWA_12 4443112 : 4527283 86 Pseudomonas_phage(43.24%) tail,integrase,tRNA,transposase attL 4445029:4445088|attR 4458610:4458673
DBSCAN-SWA_13 4540707 : 4566105 27 Pseudomonas_phage(80.0%) tail,integrase attL 4554107:4554121|attR 4572145:4572159
DBSCAN-SWA_14 4754298 : 4814894 57 Leptospira_phage(12.5%) transposase,integrase,protease attL 4787456:4787473|attR 4816665:4816682
DBSCAN-SWA_15 5159949 : 5221642 60 uncultured_Caudovirales_phage(33.33%) transposase,integrase attL 5174137:5174153|attR 5219969:5219985
DBSCAN-SWA_16 5308341 : 5432996 94 Leptospira_phage(31.82%) transposase,integrase,tRNA attL 5363255:5363273|attR 5407445:5408554
DBSCAN-SWA_17 6145408 : 6176692 25 Leptospira_phage(33.33%) transposase,plate NA
DBSCAN-SWA_18 6273883 : 6331250 49 uncultured_Caudovirales_phage(27.27%) transposase,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage