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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP047097 Bacillus anthracis strain FDAARGOS_698 chromosome, complete genome 5 crisprs cas14k,DinG,csa3,cas3,WYL,DEDDh,cas14j 0 1 10 0

Results visualization

1. NZ_CP047097
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047097_1 214295-214388 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047097_2 326800-326908 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047097_3 1870116-1870313 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047097_4 2248408-2248542 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047097_5 2416765-2416867 Orphan NA
1 spacers
csa3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 KJ094023 Listeria phage LP-101, complete genome 3876-3902 4 0.852
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NC_022766 Bacillus phage Glittering, complete genome 9024-9050 5 0.815
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 1229260-1229286 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 438058-438084 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 127169-127195 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 1227597-1227623 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 850854-850880 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 513839-513865 6 0.778
NZ_CP047097_4 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder 2248435-2248461 27 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 498252-498278 6 0.778

1. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 4, identity: 0.852

cgtctttggctcttctggtttctcttc	CRISPR spacer
catttctggctcttctggtttcttttc	Protospacer
*.*.*.*****************.***

2. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NC_022766 (Bacillus phage Glittering, complete genome) position: , mismatch: 5, identity: 0.815

cgtctttggctcttctggtttctcttc	CRISPR spacer
gttcaatggctcttctggtttctcatc	Protospacer
  **  ****************** **

3. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

4. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

5. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctgt	Protospacer
*.   ******************** .

6. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

7. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

8. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

9. spacer 4.1|2248435|27|NZ_CP047097|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctgt	Protospacer
*.   ******************** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 988417 : 997150 8 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_2 1306327 : 1313451 9 Bacillus_phage(71.43%) NA NA
DBSCAN-SWA_3 2596321 : 2633186 39 Bacillus_phage(31.03%) holin,portal,tail,capsid,protease,head,terminase,transposase NA
DBSCAN-SWA_4 2645524 : 2657078 21 Bacillus_phage(66.67%) integrase attL 2639617:2639633|attR 2663413:2663429
DBSCAN-SWA_5 2894380 : 2939878 63 Bacillus_phage(96.0%) holin,integrase,portal,tail,capsid,protease,head,terminase attL 2897087:2897103|attR 2941669:2941685
DBSCAN-SWA_6 3967675 : 4009907 47 Staphylococcus_phage(26.67%) holin,portal,integrase,capsid,protease,head,terminase,tRNA attL 3958052:3958067|attR 4012358:4012373
DBSCAN-SWA_7 4636060 : 4644009 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_8 4674689 : 4683066 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_9 4823464 : 4854133 46 Bacillus_phage(67.5%) integrase,head,tail,capsid,protease,terminase attL 4827806:4827821|attR 4842469:4842484
DBSCAN-SWA_10 4858021 : 4861889 6 Bacillus_phage(66.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage