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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP047103 Bacillus anthracis strain FDAARGOS_700 plasmid unnamed4 0 crisprs NA 0 0 0 0
NZ_CP047102 Bacillus anthracis strain FDAARGOS_700 plasmid unnamed3 0 crisprs NA 0 0 0 0
NZ_CP047100 Bacillus anthracis strain FDAARGOS_700 plasmid unnamed1 0 crisprs NA 0 0 0 0
NZ_CP047099 Bacillus anthracis strain FDAARGOS_700 chromosome, complete genome 5 crisprs cas3,csa3,WYL,c2c9_V-U4,cas14k,DinG,DEDDh,cas14j 0 1 10 0
NZ_CP047101 Bacillus anthracis strain FDAARGOS_700 plasmid unnamed2 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP047099
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047099_1 1441717-1441810 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047099_2 1554222-1554330 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047099_3 3097538-3097735 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047099_4 3475830-3475964 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047099_5 3644187-3644289 Orphan NA
1 spacers
csa3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 KJ094023 Listeria phage LP-101, complete genome 3876-3902 4 0.852
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NC_022766 Bacillus phage Glittering, complete genome 9024-9050 5 0.815
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NC_003037 Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence 1229260-1229286 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NZ_CP021794 Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence 438058-438084 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NZ_CP021809 Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence 127169-127195 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NC_020527 Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence 1227597-1227623 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NZ_CP021798 Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence 850854-850880 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NC_017324 Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence 513839-513865 6 0.778
NZ_CP047099_4 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder 3475857-3475883 27 NC_018683 Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence 498252-498278 6 0.778

1. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 4, identity: 0.852

cgtctttggctcttctggtttctcttc	CRISPR spacer
catttctggctcttctggtttcttttc	Protospacer
*.*.*.*****************.***

2. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NC_022766 (Bacillus phage Glittering, complete genome) position: , mismatch: 5, identity: 0.815

cgtctttggctcttctggtttctcttc	CRISPR spacer
gttcaatggctcttctggtttctcatc	Protospacer
  **  ****************** **

3. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

4. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NZ_CP021794 (Sinorhizobium meliloti strain USDA1157 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

5. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctgt	Protospacer
*.   ******************** .

6. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

7. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

8. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctat	Protospacer
*.   ******************** .

9. spacer 4.1|3475857|27|NZ_CP047099|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 6, identity: 0.778

cgtctttggctcttctggtttctcttc	CRISPR spacer
cagggttggctcttctggtttctctgt	Protospacer
*.   ******************** .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 11 : 40644 41 Staphylococcus_phage(20.0%) terminase,protease,capsid,portal,holin,transposase,head,integrase attL 7112:7126|attR 12667:12681
DBSCAN-SWA_2 636046 : 643995 6 uncultured_virus(33.33%) NA NA
DBSCAN-SWA_3 674675 : 683052 8 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_4 823450 : 854120 46 Bacillus_phage(67.5%) terminase,protease,capsid,tail,head,integrase attL 827792:827807|attR 842456:842471
DBSCAN-SWA_5 858008 : 861876 6 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_6 2215835 : 2224568 8 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_7 2533745 : 2540869 9 Bacillus_phage(71.43%) NA NA
DBSCAN-SWA_8 3823743 : 3860608 39 Bacillus_phage(31.03%) terminase,protease,capsid,portal,holin,tail,transposase,head NA
DBSCAN-SWA_9 3872946 : 3884500 21 Bacillus_phage(66.67%) integrase attL 3867039:3867055|attR 3890835:3890851
DBSCAN-SWA_10 4090913 : 4167297 90 Bacillus_phage(92.45%) terminase,protease,capsid,portal,tRNA,holin,tail,head,integrase attL 4124506:4124522|attR 4169088:4169104
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage