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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP043060 Pseudomonas sp. J380 chromosome, complete genome 7 crisprs DEDDh,csa3,WYL,DinG,cas3,PD-DExK,RT 0 0 11 0

Results visualization

1. NZ_CP043060
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_1 166422-166520 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_2 399919-400013 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_3 1277606-1277709 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_4 1629833-1629927 Orphan NA
1 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_5 1775576-1775671 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_6 2235145-2235241 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP043060_7 6077626-6077724 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 15745 : 150064 176 uncultured_Caudovirales_phage(49.11%) tail,lysis,head,portal,protease,capsid,integrase,terminase,tRNA attL 100801:100848|attR 150267:150314
DBSCAN-SWA_2 324259 : 357257 28 Bacillus_virus(16.67%) protease,coat NA
DBSCAN-SWA_3 455544 : 461767 8 uncultured_Caudovirales_phage(83.33%) tRNA NA
DBSCAN-SWA_4 801398 : 866211 82 Pseudomonas_phage(37.21%) tail,lysis,transposase,head,capsid,integrase,plate attL 796727:796746|attR 840396:840415
DBSCAN-SWA_5 2492333 : 2497406 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_6 2563096 : 2627508 67 uncultured_Caudovirales_phage(27.59%) tail,bacteriocin,holin,plate,tRNA NA
DBSCAN-SWA_7 3075529 : 3085077 8 uncultured_Caudovirales_phage(71.43%) NA NA
DBSCAN-SWA_8 4512409 : 4523257 13 uncultured_Caudovirales_phage(90.91%) NA NA
DBSCAN-SWA_9 4568980 : 4589169 16 Klosneuvirus(33.33%) protease,holin NA
DBSCAN-SWA_10 4626148 : 4669473 55 Pseudomonas_phage(33.33%) tail,transposase,head,protease,integrase,plate attL 4619717:4619734|attR 4669914:4669931
DBSCAN-SWA_11 4712579 : 4735860 28 uncultured_Caudovirales_phage(92.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage