CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047186	Rathayibacter tanaceti strain VKM Ac-2761 chromosome, complete genome	1 crisprs	WYL,csa3,cas3,DEDDh,Cas9_archaeal,RT	0	1	0	0

Cas Category Instructions

Results visualization

1. NZ_CP047186

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047186_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047186_1

1984331-1984417

Orphan

Consensus_repeat	Method
GCTGGCGAAGGGGTTGTTGCCGGGGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047186_1

>merge|NZ_CP047186|1|1984331-1984417|CRISPRCasFinder
GCTGGCGAAGGGGTTGTTGCCGGGGCGCGGGGCGGCCGGACGCTGACCCATGCCCTGGTTGCTGGCGAAGGGGTTGTTCCCGGGGCG

>NZ_CP047186|1|1|1984331-1984417|CRISPRCasFinder
GCTGGCGAAGGGGTTGTTGCCGGGGCG	CGGGGCGGCCGGACGCTGACCCATGCCCTGGTT
GCTGGCGAAGGGGTTGTTCCCGGGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047186.1\|WP_068208365.1\|1990534_1991704_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NZ_CP047186.1\|WP_132504128.1\|1978489_1979089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180660
NZ_CP047186.1\|WP_082844959.1\|1985108_1985411_-\|YlxR-family-protein	unknown	unknown	gnl\|CDD\|377288
NZ_CP047186.1\|WP_132504407.1\|1991971_1993339_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100084
NZ_CP047186.1\|WP_068212047.1\|1975983_1976352_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047186.1\|WP_068212051.1\|1974473_1975415_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP047186.1\|WP_068212045.1\|1977412_1978411_+\|ketopantoate-reductase-family-protein	unknown	unknown	gnl\|CDD\|235821
NZ_CP047186.1\|WP_068212053.1\|1972838_1974386_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187556
NZ_CP047186.1\|WP_068213513.1\|1981464_1981896_-\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP047186.1\|WP_068208356.1\|1985462_1986464_-\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|237061
NZ_CP047186.1\|WP_068212049.1\|1975414_1975933_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047186.1\|WP_068208362.1\|1990030_1990513_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047186.1\|WP_068208368.1\|1993418_1994501_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	unknown	unknown	gnl\|CDD\|235472
NZ_CP047186.1\|WP_082845206.1\|1976348_1977332_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235113
NZ_CP047186.1\|WP_132504125.1\|1980046_1981468_+\|RNB-domain-containing-ribonuclease	unknown	unknown	gnl\|CDD\|223631
NZ_CP047186.1\|WP_132504119.1\|1988196_1989963_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP047186.1\|WP_082844960.1\|1986723_1987233_-\|DUF2599-domain-containing-protein	unknown	unknown	gnl\|CDD\|378494
NZ_CP047186.1\|WP_158286059.1\|1987337_1987496_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047186.1\|WP_068212040.1\|1979125_1980007_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP047186.1\|WP_132504121.1\|1987532_1987778_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047186.1\|WP_068208365.1\|1990534_1991704_-\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NZ_CP047186.1\|WP_132504128.1\|1978489_1979089_-\|hypothetical-protein	gnl\|CDD\|180660	PRK06696, PRK06696, uridine kinase; Validated.	1.05076e-30
NZ_CP047186.1\|WP_082844959.1\|1985108_1985411_-\|YlxR-family-protein	gnl\|CDD\|377288	pfam04296, DUF448, Protein of unknown function (DUF448).	8.93542e-20
NZ_CP047186.1\|WP_132504407.1\|1991971_1993339_-\|site-2-protease-family-protein	gnl\|CDD\|100084	cd06163, S2P-M50_PDZ_RseP-like, RseP-like Site-2 proteases (S2P), zinc metalloproteases (MEROPS family M50A), cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. In Escherichia coli, the S2P homolog RseP is involved in the sigmaE pathway of extracytoplasmic stress responses. Also included in this group are such homologs as Bacillus subtilis YluC, Mycobacterium tuberculosis Rv2869c S2P, and Bordetella bronchiseptica HurP. Rv2869c S2P appears to have a role in the regulation of prokaryotic lipid biosynthesis and membrane composition and YluC of Bacillus has a role in transducing membrane stress. This group includes bacterial and eukaryotic S2P/M50s homologs with either one or two PDZ domains present. PDZ domains are believed to have a regulatory role. The RseP PDZ domain is required for the inhibitory reaction that prevents cleavage of its substrate, RseA.	7.44097e-42
NZ_CP047186.1\|WP_068208356.1\|1985462_1986464_-\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|237061	PRK12327, nusA, transcription elongation factor NusA; Provisional.	4.74889e-171
NZ_CP047186.1\|WP_068212045.1\|1977412_1978411_+\|ketopantoate-reductase-family-protein	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	7.33226e-47
NZ_CP047186.1\|WP_068212053.1\|1972838_1974386_-\|SDR-family-oxidoreductase	gnl\|CDD\|187556	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2. This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.1053e-123
NZ_CP047186.1\|WP_068213513.1\|1981464_1981896_-\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	1.45277e-47
NZ_CP047186.1\|WP_068212051.1\|1974473_1975415_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	4.18572e-122
NZ_CP047186.1\|WP_132504119.1\|1988196_1989963_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP047186.1\|WP_068208368.1\|1993418_1994501_-\|1-deoxy-D-xylulose-5-phosphate-reductoisomerase	gnl\|CDD\|235472	PRK05447, PRK05447, 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional.	0
NZ_CP047186.1\|WP_082845206.1\|1976348_1977332_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235113	PRK03287, truB, tRNA pseudouridine synthase B; Provisional.	2.35935e-133
NZ_CP047186.1\|WP_132504125.1\|1980046_1981468_+\|RNB-domain-containing-ribonuclease	gnl\|CDD\|223631	COG0557, VacB, Exoribonuclease R [Transcription].	3.91179e-68
NZ_CP047186.1\|WP_082844960.1\|1986723_1987233_-\|DUF2599-domain-containing-protein	gnl\|CDD\|378494	pfam10783, DUF2599, Protein of unknown function (DUF2599). This family is conserved in Actinobacteria. The function is not known.	4.97519e-23
NZ_CP047186.1\|WP_068212040.1\|1979125_1980007_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.58107e-92

>NZ_CP047186.1|WP_068213513.1|1981464_1981896_-|30S-ribosome-binding-factor-RbfA
MADPARARKLAERIQVIVAKRLERGLRDPRLGFVTITDVQVTGDLQHASVFYTVYGTDEERADSAAALKAATGMLRTEVGKNITARLTPSLEFILDALPENAQHIEELLAAARSQDSQVQSLAAQADYAGEADPYVKPREDED
>NZ_CP047186.1|WP_132504125.1|1980046_1981468_+|RNB-domain-containing-ribonuclease
MTGRRLRLPRPDDDVDRALAAVRVAIDLPGAFPAEALAEAEHADANAEDGGRSDRTDLPFVTIDPPGSLDLDQALHLERTTDGVVLRYAIADVPAVVHSGGALDAEARRRGQTVYLPDGRIPLHPAVLSEGTASLLPDVRRRALVWTLTLDERAEPRSVRLERSLVRSVARLDYGAVQRSVEAGEPHPSIALLAWFGRERLAREAERGGASLTLPEEEIVAVGGGYRVERRAPLAVEAWNAQVSLLTGMVAARMMLGAGVGILRTMPAADPETVAAFRARAAALGTPWPTEEPYGAYLRRLDTGDPAQLAVMHAAATLFRGAGYTAFDGTPPEHPAQSALAAPYAHVTAPLRRLVDRFGLAVCLAVSNGDAVPDGLRAALPGLPPLLAASDRRAGAASRAATAIVEAAILRGREGASFTGVVVSSGRNRSAVQLLEPEITVDVQAPLLPGARVVVVLESVDVATGSAVFGLSA
>NZ_CP047186.1|WP_068212040.1|1979125_1980007_+|A/G-specific-adenine-glycosylase
MPSAALADVIVDWFRTSARDLPWRRDGFPAWGTLVSEFMLQQTPVVRVVPRLADWLERWPTPSALAAVPPGEAVRAWQSLGYPRRALRLHACAVAIAQEHGDVVPDDVDTLLALPGIGDYTARAIAVFAYGRRHPVVDTNVRRVIARAVDGAAEPGPPRAKADLAAMAALLPEPLPEAAAFNAGMMELGAVVCTARAPRCDECPIRHLCRWRADGYPEHTGPVKAPQKRFEGSDRQVRGLILAELRAAHAPVTAAEVESLWPDAQQRRRALAGLLADGLATGDPVDGYLLPGA
>NZ_CP047186.1|WP_132504128.1|1978489_1979089_-|hypothetical-protein
MTRWAPQKADVLDALAAEVLHNYGRGRVAVGVDGDDPAVSGVFALELAEALRRAGHDAIVAHLADFHRPRLERDDPSVPEEQRAYSGRYDYELLRRVLLDPFRLGGSTGFVLAGFDSVRDEARQACWRTAGQDAVLLVDGEFALRPELRGAWSTSIRLDTQEPPVDAAYRASTDPRRLATILVDIRDPEQPRRLFADSC
>NZ_CP047186.1|WP_068212045.1|1977412_1978411_+|ketopantoate-reductase-family-protein
MRIAVLGAGAVGGTVAALLDRAGHDVEVTARGEHLAAIRRSGLRLDGAWGEHTAWVRCGETLDLAPELAVVCTKAQDAEDALRANRRTVDGTLVVVVQNGLDGLQAAARQVRDARLVGALALFAASHLEPGRVSVTAAALTTLGVPGRPADDDVRRAAVVLGEAIPTETTDDFVGAQWTKLLINEVNALPAITGLSVQETVADPGLRRVLARALREAARTGIAAGVRFGTLQGLSHGSIRALAAAPLPVVELLPRRMAAGMGEVPNPGSTLQSIRRGVPSEIDHLAGAVVRTAERGGREARVNQLLVELVHEVERTGVFLPPADVVRRAALV
>NZ_CP047186.1|WP_082845206.1|1976348_1977332_-|tRNA-pseudouridine(55)-synthase-TruB
MLETPSPAPTAPAAVAATAPAASSAPNGILLLDKPGGITSHDLVSRTRRRAGTRKVGHAGTLDPMATGLMILGLGPSTRLLTYLVGLDKQYEATIRLGASTTTDDREGELLGSAEPALVAALAPEAVVDAVAALTGEIAQIPSTVSAIKVDGRRAYARVRDGEEVVLEARPVTVSSFDVLARREVDGFLDLDVRVTCSSGTYIRALARDLGAALGVGGHLTVLRRTAVGPFTVVRAGALDELDVPAALLPPAAAAGELFPLLRLESREAVDLANGKRIPAPEEVARVKGLLAAVGPGERLIGLAERRGTQLKSVVNFPTEELRTAAS
>NZ_CP047186.1|WP_068212047.1|1975983_1976352_-|hypothetical-protein
MIEWFTILQVGIAVAAGLLCLVLGLVGRRPSDVSVGATAIVELLLIVQLAVAIVSPLVGNRPSGSLPEYYVYLISALLLPLAAGFWALIERSRWSTLILGVACLSIAVMVYRMHQIWFVQSA
>NZ_CP047186.1|WP_068212049.1|1975414_1975933_-|hypothetical-protein
MSKPASEASGRAAHDPRLPSAPASADPSRSARSRGIGSLLVVVYGILALAATGRSLFQIIDRFDEAPLAFSLSALSAVVYIVATVALIVPGRAWQRVAWVTITFELVGVLVVGAVSVLEPQLLGLTSADPFGRQSTVWAAFGAGYLLIPLVLPVLGLWWLRVQGRRGPRAAS
>NZ_CP047186.1|WP_068212051.1|1974473_1975415_-|bifunctional-riboflavin-kinase/FAD-synthetase
MRVETRPGDLAGIGPSAVSIGKFDGVHAGHRAVIGTLHDRARERGLAAVVVTFDRNPLSVIAPEKCPPALVGNEQKLELLAGTGVDATLLLTFDEEFRALSPEEFVQHVLVDALEARVVLVGSDFRFGARGAGDIGMLRRLSEQHGFEVELIDDVRPEDGRRVSSTWIRELLAEGDVEHATRLLGHEPVVRGVVVHGAKRGRELGFPTANLSPQSQGLIPADGVYAGRLTTDGVTHPAAISVGSNPTFAGVPPKQVEAYVLDQTLETLDLYDRVVEVAFVGRIRGQVAYEGVEPLIRQMNDDVLRVREVLGIA
>NZ_CP047186.1|WP_068212053.1|1972838_1974386_-|SDR-family-oxidoreductase
MSQSPSDSTRPLALVTGATGYIGGRLTPRLLEAGFRVRVLVRDPRKLSDVPWAEEVEVAQGDLGDPESLTAAVDGVDVLYYLVHSMGSGNDHAHFEEVESRAAQNVASAAMAGGVGRIVYLGGLHPDGQELSKHLRSRAEVGRILMESGVPTIALQAGVIIGSGSTSFEMVRHLTDVLPYMPAPQWVRNFIQPIAVRDVLHYLIGAASLEDRRLNRTFDIGGPDVLRYGQMMNGYAVEAGLRQRPIASLPVFTPWLASQWVNLVTPIPRSLAVPIIASLQYDCVVHEQDIRSLIPDPEGGLTSYRRAVRLALGRMQAGEIETSWQNAEVVGAPSDPLPSDPEWAGHTVYVDLKVRRTQADPAKLWRVIEGIGGTNGWYSFPLAWVIRGWMDRLVGGVGLQRGRRDSARLHAGDALDFWRVEAIERPTLLRLRAEMKVPGGAWLEMRAEPSDGGGSVYTQRAVFFPQGLAGRLYWFAILPFHGVIFNGMANRITATAADLPDSGDERSPGGRRAQR
>NZ_CP047186.1|WP_082844959.1|1985108_1985411_-|YlxR-family-protein
MSPVRTCVGCRLRAPRASLLRLVLHSNVLAVDPRAVRPGRGAWLHDSADCYGLAVKRRAFGRAFRTRESVDASELEQYVMRVRTGSVPHPEGPEQRTITP
>NZ_CP047186.1|WP_068208356.1|1985462_1986464_-|transcription-termination/antitermination-protein-NusA
MDIDLSVLRLMEREREIPFEELVQIIEQAILTAYLKHIGQADDADKSTAVSARVHLDRKTGHVSVFVPEYDDEGAVVGEAEDSPRDFGRIAAFAAKQVINQRLRDIADEHVLGEFKGREGDIVAGVIQQGPNPRMIHVDLGSIEAILSPEEQVPGEDYSHGRRIRVYVTSVGRGAKGPSVQVSRTHPSLVRKLFALEVPEIASGVVEIVSLAREAGHRTKIAVRATEPGVNAKGACIGELGQRVRAVTAELNNEKIDIVDYSSDLPTFVASALSPAKVTSAFVIDQGLKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSVMDGE
>NZ_CP047186.1|WP_082844960.1|1986723_1987233_-|DUF2599-domain-containing-protein
MAAAQAACSTSPASGADEGRWARDANGTSIPTHYDVTGTTLTQIVDLSQPDIAFPVVADPWFGRNLIDHVTWVPGDPQWGPTAQVYPTDYGRDQIAVGPEANEAAWGEALEKGDRSRLDHNNLHDHFSCHFLGRSSTVGKESWNLDNNRPDVGLAATIAASCNPQGGED
>NZ_CP047186.1|WP_158286059.1|1987337_1987496_-|hypothetical-protein
MPDSLSIALTAAFALSVAGFVTVVASAVVSLRRARRQDPTTRVRSTTALAGA
>NZ_CP047186.1|WP_132504121.1|1987532_1987778_-|hypothetical-protein
MNASHDQVKKTLQIGAAVSAVSLLAGAVFVPLLILAVVAVIASAIVAAAISCRATHRWAWTWVAGVASVVWVSSAIYAFDV
>NZ_CP047186.1|WP_132504119.1|1988196_1989963_-|proline--tRNA-ligase
MVTRLSHLFVRTLREDPADAEVAGHRLLVRAGYIRRQAPGVFAWLPLGLRVKRRIERILHEEMEAAGAQEVHFPALLPREPYELTGRWTEYGDGVFRLKDRKDADYMLAPTHEEFFTLLVKDLYSSYKDLPLSIYQIQDKYRDEARPRAGLLRGREFTMKDAYSFDYTDAGLDASYQRQRDAYERIFARLGLEYVIVQADAGAMGGSRSEEFLHPTPVGEDTFVRSAGGYAANVEAYRTPVPEASPVEGRPEARVFDSPDTPTIQTLVDLANATQPRTDGRAWTAGDTLKNVVLALTALDGTRELVIVGLPGDRDVDLKRAEVAFAPAEVEAATAEDFAKHPGLVKGYIGPWSSEGAVLGEESATGVRYLLDPRVVDGTAWITGANVSGQHVLDLLAGRDFHADGTVEVAEVRTGDEAPDGSGPIETARGMEIGHVFQLGRKYAEVLGLKVLDENGKLVTVTMGSYGIGVTRILAIIAESTHDERGLLWPANVAPFDVHVIATGKDAAALELAESVGASLEAAGRDVLIDDRPKVSPGVKFGDAELIGVPVIVIAGRGAADGIVELWDRRSGEREQLPVAEALARLGA
>NZ_CP047186.1|WP_068208362.1|1990030_1990513_-|hypothetical-protein
MVRPALLLAFGVVAVTLVASGVAALRSTPAPLSDDCVDLRTAQDPFGCDGWVLTAAEGETPYSAWVEDARVRLRSERVAGEPTLVVGTDCLVLRASYRIEGTVLVPSDEVTGSDTCSDTPSPAGIRLRALLSAPITLGGTPDDVVLDGTRGAVVFSRIPG
>NZ_CP047186.1|WP_068208365.1|1990534_1991704_-|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MGRVPAVNLGLPKVPMTLAPRRKSRQIKVGKVLVGGDAQVSVQSMCTTPTTNINATLQQIAELTASGCDIVRVAVPSRDDAEALPIIAKKSQIPVIADIHFQPNYVYAAIDAGCAAVRVNPGNIRKFDDQVGKIAAAAKAAGVSIRIGVNAGSLEPSILQKYGKPTPEALVESAVWEASLFEEHDFHDFKISVKHNDPVVMVKAYRQLAERGDWPLHLGVTEAGPEFQGTIKSATAFGILLGEGIGDTIRVSLSAPPAQEVKVGLQILQSLNLRERKLEIVSCPSCGRAQVDVYTLANDVTAGLEGMSVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPEAEIVQTLIEEANRLAAEMPADDTSTGAPVVTVGAN
>NZ_CP047186.1|WP_132504407.1|1991971_1993339_-|site-2-protease-family-protein
MLLFVLGVVIIAIGVALSIALHEVGHLVPAKLFGVKVTQYMIGFGPTIFSRRRGETEYGVKALPLGGYIAMIGMYPPKHAGDPITESPVGLFQGVGYQSSEKRTAGRPTLIDEARAASAETIGEGEEHRAFYLLPVWKRVIVMAGGPFMNLLIATVLFTVLLCGIGVAQSTSTLASVSQCVVPESQRATATCTADDPLAPGAAAGLLPGDTITAIDGTPVGTWNDLTPIIQRSAGVPLSVAVERDGASLTLSITPAENEVAVTDSAGNPVTDASGAVETQTVGFIGISPTSELARQPITAVPGTVWQNITSVAHVILNLPQRLIDVAQAAFGTEARDANGPISVVGVGRIAGEIAASDQLPIVSKVQTMVGVLASLNVALLVFNLVPLLPMDGGHIAGALWEGLRRRIAKLFGRRDPGPVDIARLLPLTYIVVLVLGGMSALLIYADIVKPITLF
>NZ_CP047186.1|WP_068208368.1|1993418_1994501_-|1-deoxy-D-xylulose-5-phosphate-reductoisomerase
MRRVIILGSTGSIGTQALDVIGANLDRFEVVGLAAGSNRPVVAEQAAAFGVEHTAFGADEAEQLIRSVEADVVLNGITGSVGLGPTLAALEEGRTLALANKESLIVGGELVTSLAAPGQIVPVDSEHSAIAQALLAGAHREVRRLVLTASGGPFRGRDRGSLRDVTPAEALAHPTWDMGLVVTTNSSTLVNKGLEVIEAHLLFDVPYHRIDVTVHPQSVIHSMVEYVDGSTIAQASPPDMRLPISLGLDWPHRVAGVGAPLDWTRSHSWTFEPLDEEAFPAVRLAKRVGEAGASYPAVFNAANEQAVQAFHAGRIGYLDILATVEAVVDAHAVDGALTRQSLAAAEEWARRAADARIAGT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047186_1	1.1\|1984358\|33\|NZ_CP047186\|CRISPRCasFinder	1984358-1984390	33	NZ_CP022191	Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence	451361-451393	9	0.727
NZ_CP047186_1	1.1\|1984358\|33\|NZ_CP047186\|CRISPRCasFinder	1984358-1984390	33	NC_009128	Corynebacterium sp. L2-79-05 plasmid pLEW279a, complete sequence	25600-25632	9	0.727
NZ_CP047186_1	1.1\|1984358\|33\|NZ_CP047186\|CRISPRCasFinder	1984358-1984390	33	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	27741-27773	10	0.697

1. spacer 1.1|1984358|33|NZ_CP047186|CRISPRCasFinder matches to NZ_CP022191 (Yangia pacifica strain YSBP01 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.727

cggggcggccggacgctgacccatgccctggtt	CRISPR spacer
gaggctggcgcgacgctgacccatgccctgaag	Protospacer
 .** .***  *******************.

2. spacer 1.1|1984358|33|NZ_CP047186|CRISPRCasFinder matches to NC_009128 (Corynebacterium sp. L2-79-05 plasmid pLEW279a, complete sequence) position: , mismatch: 9, identity: 0.727

cggggcggccggacgctgacccatgccctggtt	CRISPR spacer
cgggtcggccggacggtgacccatcaggtgcgc	Protospacer
**** ********** ********    **  .

3. spacer 1.1|1984358|33|NZ_CP047186|CRISPRCasFinder matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.697

cggggcggccggacgctgacccatgccctggtt	CRISPR spacer
gatggcggctggacgcagacccatgccgacggg	Protospacer
 . ******.****** **********   *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage