Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP047236 Gordonia sp. JH63 plasmid pJH63-1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP047235 Gordonia sp. JH63 chromosome, complete genome 5 crisprs WYL,csa3,cas3,DinG,DEDDh,cas4,RT 3 0 2 0

Results visualization

1. NZ_CP047235
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047235_1 2750223-2750321 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047235_2 3360323-3360415 Orphan NA
1 spacers
WYL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047235_3 3844340-3844416 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047235_4 4719021-4719137 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047235_5 5171411-5171617 Orphan NA
4 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP047235_1 1.1|2750247|51|NZ_CP047235|CRISPRCasFinder 2750247-2750297 51 NZ_CP047235.1 2750284-2750334 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 2653026-2653044 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 2653975-2653993 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 2654019-2654037 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 3367733-3367751 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4110459-4110477 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4446982-4447000 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4447018-4447036 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4447054-4447072 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4865718-4865736 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4865754-4865772 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 5137920-5137938 0 1.0
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 649040-649058 1 0.947
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 1208739-1208757 1 0.947
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 1637170-1637188 1 0.947
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 3112244-3112262 1 0.947
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 3773316-3773334 1 0.947
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 5171301-5171319 1 0.947
NZ_CP047235_3 3.1|3844369|19|NZ_CP047235|CRISPRCasFinder 3844369-3844387 19 NZ_CP047235.1 4007825-4007843 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 2652981-2652999 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 3427812-3427830 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4476164-4476182 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4751386-4751404 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 4751429-4751447 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 5171229-5171247 2 0.895
NZ_CP047235_5 5.1|5171436|19|NZ_CP047235|CRT 5171436-5171454 19 NZ_CP047235.1 5171337-5171355 2 0.895

1. spacer 1.1|2750247|51|NZ_CP047235|CRISPRCasFinder matches to position: 2750284-2750334, mismatch: 0, identity: 1.0

cggcgccggcatcaattcggcccgctcgcttcgctcccggcgccggcatca	CRISPR spacer
cggcgccggcatcaattcggcccgctcgcttcgctcccggcgccggcatca	Protospacer
***************************************************

2. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 2653026-2653044, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

3. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 2653975-2653993, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

4. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 2654019-2654037, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

5. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 3367733-3367751, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

6. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4110459-4110477, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

7. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4446982-4447000, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

8. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4447018-4447036, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

9. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4447054-4447072, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

10. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4865718-4865736, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

11. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4865754-4865772, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

12. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 5137920-5137938, mismatch: 0, identity: 1.0

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagggggt	Protospacer
*******************

13. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 649040-649058, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcatggggt	Protospacer
************* *****

14. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 1208739-1208757, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcaaggggt	Protospacer
*************.*****

15. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 1637170-1637188, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tccccagggagcagggggt	Protospacer
***.***************

16. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 3112244-3112262, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcaggtggt	Protospacer
*************** ***

17. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 3773316-3773334, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcaaggggt	Protospacer
*************.*****

18. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 5171301-5171319, mismatch: 1, identity: 0.947

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcaggtggt	Protospacer
*************** ***

19. spacer 3.1|3844369|19|NZ_CP047235|CRISPRCasFinder matches to position: 4007825-4007843, mismatch: 2, identity: 0.895

cgaccagcagtacggggac	CRISPR spacer
cgacaagcagtacgcggac	Protospacer
**** ********* ****

20. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 2652981-2652999, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tccgcagggagcggggggt	Protospacer
*** ********.******

21. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 3427812-3427830, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcgggtggt	Protospacer
************.** ***

22. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4476164-4476182, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcagttggt	Protospacer
**************  ***

23. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4751386-4751404, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcgggaggt	Protospacer
************.**.***

24. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 4751429-4751447, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcgggaggt	Protospacer
************.**.***

25. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 5171229-5171247, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcgggtggt	Protospacer
************.** ***

26. spacer 5.1|5171436|19|NZ_CP047235|CRT matches to position: 5171337-5171355, mismatch: 2, identity: 0.895

tcctcagggagcagggggt	CRISPR spacer
tcctcagggagcgggtggt	Protospacer
************.** ***

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 86440 : 131807 38 Gordonia_phage(50.0%) transposase NA
DBSCAN-SWA_2 3546549 : 3556189 8 Gordonia_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage