CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019431	Pseudomonas sp. S35 chromosome, complete genome	2 crisprs	DEDDh,DinG,csa3,WYL,cas3,RT	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019431_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019431_1

3826601-3826681

Orphan

Consensus_repeat	Method
CAACCCCCTGGATAAAACAGCCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019431_1

>merge|NZ_CP019431|1|3826601-3826681|CRISPRCasFinder
CAACCCCCTGGATAAAACAGCCGGACACGATGCTGAAGTAATCAACAAACCAATGCGCAACCTCCTGGATAAAACAGCCGG

>NZ_CP019431|1|1|3826601-3826681|CRISPRCasFinder
CAACCCCCTGGATAAAACAGCCGG	ACACGATGCTGAAGTAATCAACAAACCAATGCG
CAACCTCCTGGATAAAACAGCCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019431.1\|WP_159935879.1\|3822573_3822957_-\|DUF2946-family-protein	unknown	unknown	gnl\|CDD\|371400
NZ_CP019431.1\|WP_159935876.1\|3820952_3821777_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159935896.1\|3830628_3831432_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP019431.1\|WP_159935894.1\|3829498_3830641_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP019431.1\|WP_159935874.1\|3819808_3820591_+\|DeoR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP019431.1\|WP_159935886.1\|3825700_3826192_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019431.1\|WP_174244823.1\|3832423_3833377_+\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP019431.1\|WP_159935897.1\|3831810_3832314_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|180803
NZ_CP019431.1\|WP_159935877.1\|3821965_3822511_-\|putative-natural-product-biosynthesis-protein	unknown	unknown	gnl\|CDD\|274952
NZ_CP019431.1\|WP_159935891.1\|3827344_3828565_-\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP019431.1\|WP_159935884.1\|3825120_3825522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159935892.1\|3828693_3829509_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP019431.1\|WP_159935880.1\|3823138_3823744_+\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP019431.1\|WP_159935900.1\|3836364_3839121_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP019431.1\|WP_159935902.1\|3839117_3840854_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226646
NZ_CP019431.1\|WP_159935882.1\|3823743_3824226_+\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|377298
NZ_CP019431.1\|WP_159935899.1\|3833514_3836334_+\|TonB-dependent-receptor-plug-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP019431.1\|WP_159935889.1\|3826859_3827285_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP019431.1\|WP_159935883.1\|3824342_3824810_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP019431.1\|WP_159935875.1\|3820598_3820805_-\|PLDc-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379161

Protein	Function_ID	Function_description	E-value
NZ_CP019431.1\|WP_159935879.1\|3822573_3822957_-\|DUF2946-family-protein	gnl\|CDD\|371400	pfam11162, DUF2946, Protein of unknown function (DUF2946). This family of proteins has no known function.	6.07994e-06
NZ_CP019431.1\|WP_159935891.1\|3827344_3828565_-\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	9.49864e-52
NZ_CP019431.1\|WP_159935896.1\|3830628_3831432_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.33659e-81
NZ_CP019431.1\|WP_159935894.1\|3829498_3830641_+\|PAS-domain-S-box-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.581e-40
NZ_CP019431.1\|WP_159935874.1\|3819808_3820591_+\|DeoR-family-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.89045e-72
NZ_CP019431.1\|WP_159935886.1\|3825700_3826192_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.571e-10
NZ_CP019431.1\|WP_159935897.1\|3831810_3832314_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|180803	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated.	9.5991e-53
NZ_CP019431.1\|WP_159935877.1\|3821965_3822511_-\|putative-natural-product-biosynthesis-protein	gnl\|CDD\|274952	TIGR04061, hypothetical_protein_MettrDRAFT_3896, AZL_007950 family protein. This set of proteins includes PP_3335 from Pseudomonas putida, a protein of unknown function, and AZL_007950, a member of a putative biosynthetic cluster from Azospirillum sp. B510.	1.60103e-81
NZ_CP019431.1\|WP_159935899.1\|3833514_3836334_+\|TonB-dependent-receptor-plug-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.8171e-11
NZ_CP019431.1\|WP_174244823.1\|3832423_3833377_+\|FecR-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	3.49084e-69
NZ_CP019431.1\|WP_159935892.1\|3828693_3829509_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.41694e-32
NZ_CP019431.1\|WP_159935880.1\|3823138_3823744_+\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	6.10829e-49
NZ_CP019431.1\|WP_159935900.1\|3836364_3839121_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.10308e-40
NZ_CP019431.1\|WP_159935902.1\|3839117_3840854_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226646	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only].	1.66201e-179
NZ_CP019431.1\|WP_159935882.1\|3823743_3824226_+\|copper-chaperone-PCu(A)C	gnl\|CDD\|377298	pfam04314, PCuAC, Copper chaperone PCu(A)C. PCu(A)C is a periplasmic copper chaperone. Its role may be to capture and transfer copper to two other copper chaperones, PrrC and Cox11, which in turn deliver Cu(I) to cytochrome c oxidase.	4.86468e-41
NZ_CP019431.1\|WP_159935889.1\|3826859_3827285_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.27294e-06
NZ_CP019431.1\|WP_159935883.1\|3824342_3824810_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.57389e-11
NZ_CP019431.1\|WP_159935875.1\|3820598_3820805_-\|PLDc-N-terminal-domain-containing-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	0.00809358

>NZ_CP019431.1|WP_159935886.1|3825700_3826192_+|GNAT-family-N-acetyltransferase
MPAFTLRNALPADATRCFEIEITAYEGDEAATLEKIATRIAQYPQGFLILEVDDEVVGFINCGCAHDVVMSDEAFKELVGHAPEAPNVVIMSVVVAPAHQGKGYSRMLMTEFVQRMRAMDKCTIHLMCKEQHVPLYARMGYTYVQPSPSDHGGMAWHEMVMIF
>NZ_CP019431.1|WP_159935884.1|3825120_3825522_+|hypothetical-protein
MQGIQPAPAPFSNTSPTLPKAPEAMRMPPAPSMPDRDVIRVIVADENLYRTMELFHELARQNGISKTSVGAGKPYVADYNTPEQKVWPVSIKFFPDRPDDTFTPVHLENVNNFGKQVNEALSRAGIVKVIPVD
>NZ_CP019431.1|WP_159935883.1|3824342_3824810_-|GNAT-family-N-acetyltransferase
MLKIKRATPNDANAAFDIRREAIRSQCIGAYTAEQMALWTRGKAEDGYSALMEKPFYLGWIDDKPVATGMLDLDNREVGALFVLPQFTGRGYGKAMLDHLEDVARAREIGEVVLDATLNAASFYRACGYVGEQQAIYHSPSGLALACIPMRKRIG
>NZ_CP019431.1|WP_159935882.1|3823743_3824226_+|copper-chaperone-PCu(A)C
MTAVQHLKCFTFGIALLGFAAHASAQVQVTDAWVRASVPGQPSSGAFMTVTADSDSKLLRVASPVAKDVQIHEMSMKDDVMRMGPVDSVALPAGKAVKLDPNGYHVMLMGLTGQIKEGDQVPLTLTVENAQGEKQTVEVTAAARGLDGMDHSHMDHSKMH
>NZ_CP019431.1|WP_159935880.1|3823138_3823744_+|SCO-family-protein
MSTLFTRRKVLSGMGLLGLGLLTGCDNSPRLNFKYGKDLSDKIMGRTFKLKNTEGDTVTLSSYRGLMPVVFFGFTQCPAVCPTTLARAAQAKKLMGRDGEIMQVIFITLDPERDTPQILDKYVKAFDPSFEALYGTPEEIAVAAKEFGIFYEKIPAGDTYTLSHTATSFVFDTRGNLRLGLQASLTAQECAEDLLTVMEVC
>NZ_CP019431.1|WP_159935879.1|3822573_3822957_-|DUF2946-family-protein
MKSSHPDRSLIVWTLYFCVLMNLFVCGLGHGQMMGQQLNGIGGAFCSVDGKQAPLSDKGLSSPSSGNISNYFACPVCAALTVALVFLIGLAWLLGLGQTPRPAHEQRNKAPPRHAWPSANPRASPAV
>NZ_CP019431.1|WP_159935877.1|3821965_3822511_-|putative-natural-product-biosynthesis-protein
MNHQLPAGASRLVSKASRRLRAEPARAEYPSNSRCFVHLDARLLPYWHTLFDICPALLKLDPPEGLNLFRSFMTWAYRNQPAQDWTYHLNVCRWLLGSPYRAQIDDEPIEAFMAAAAARWVITDDSQAQGVVLAWQGLRVFDWKQAAGEGLEQPALPPAPGDFVWCSLTAQGGFSGWLPVP
>NZ_CP019431.1|WP_159935876.1|3820952_3821777_-|hypothetical-protein
MSNTYTASYSHSQTVSCGPGHGPALGHNQYARHSDADLALAFDRNFDAFREWDSPNASMRRIHEVANRPMTGNPHRDNEKMLASEILRRPQVGNALDSVDDYGRRDGIIGRHTPRMAAEQLSSCNGGPKPYPQPCHDRPPVYPQPCHGRPPAYPQPCESRPPSSTQPYPQPQPVHPSPHNVYKSVPDQTLALAFHNNFNVFKDPMTGMATTSRIQDVAGRAMVGVQSVDNMTLLAREVLIRPGLVGYLDSVDYGGRQDGIIGPNNALKVAYQLS
>NZ_CP019431.1|WP_159935875.1|3820598_3820805_-|PLDc-N-terminal-domain-containing-protein
MQIEYVWIGLAVILLLLELWAINTVLRSTSGWESKGLWLVILIFVPLFGLIAWAAFGPKREMPAQRRQ
>NZ_CP019431.1|WP_159935874.1|3819808_3820591_+|DeoR-family-transcriptional-regulator
MHSTHHAIDLPSLRKQKILLLLERDGKVTASELVEHFAVSQDTIRRDLGELAAAGLLQRVHGGALPRPKDTGKDFFTRVGETNDTKRQLAQLAADRVEDGQIVLFDSGSTTLQIAQSLPRSISLTVVTTSPMIAIALADHPNVKMILAGGQLNPATLSTGGHEAVRLIQSIKADLLFTGVCALHPEVGISSLHFDEVAVKQALLDSASHVVAVTMADKLGAVEPFVVAPCNRIHTLITEWHVPSVEAYEQLGLDVLRVEG
>NZ_CP019431.1|WP_159935889.1|3826859_3827285_+|GNAT-family-N-acetyltransferase
MTETLIEISDQANPDAERILGSGLASFNEGITGFNDRLALTVLIKDPHTRQILGGITGKTTLGMAFLDLFHLPETLRGTGLGSRLLHAFEHEARRRGCANAVLYTLSFQAPGFYEKHGWVRFGEVPCEPAGSSRIFLSKRL
>NZ_CP019431.1|WP_159935891.1|3827344_3828565_-|TPM-domain-containing-protein
MMRWLRQSLTVLLVLVLTSPLITAQADTSPIGVALDQRVIDLTNTLDAETTTRLKEQLAGLEQRKGAQVAVLLVPSIGEASIEGYANQLFRAWKLGRMDVNDGILLVVAKDNRKVRIEVGYGLEGTVTDLLAHRIIEEHIIPAFRQGDYAGGVVQGVNDLVVLVDGGDLPQVTGPGGAPQAIAVLLAFVFGAIGGVLIAARKLGWRGALITTVAVIVLLVVFAGGREWPMYLLVLPLTLLIGGATFGALWLARTAFYCVIGLLAYIVGVVIANRFVEISYIQWLVWPFGGALVLGLYLGLFFVIKASWKKSPRFFLLRALAVMAIYVAAGTLLGRGYQGWIVAIPVASFVAFIVFVQSIASGGSGSGGGAGSSSSGSSSSSSSDSSSSSSSGGGGSSGGGGASGSW
>NZ_CP019431.1|WP_159935892.1|3828693_3829509_+|alpha/beta-fold-hydrolase
MDLCQRNNVNVMGEGTSTLVFSHGFGCNQAMWAYLAPQFAERFRVVMYDLVGAGLSDLTAFDKTKYNALEGYARDLNEIIDAYAQGPVILVGHSVSAMIGTLADRLAPGRVAAHVMIGPSPRYIDTEDYVGGFKRADIDDLLDTLDSNYLGWSSAMAPVIMGAPGQPALSDELTDSFCRTEPDIAKQFARVTFMSDNRQDVIGLTTPVLILQSSDDLIAPVAVGEYLHSVLPNSTYCLVANVGHCPHMSAPQACAAAMDTFLAPWAAARAH
>NZ_CP019431.1|WP_159935894.1|3829498_3830641_+|PAS-domain-S-box-protein
MPTELFDSAACALAVTTQDGTILQANARFSDWLGFSNAELCGRRFQDLLTMGGRIFHQTHLAPMLRMHGSVTEVKLDMLHHDGHKVTVLLNGNKREQAGVVVYDLALFGTTDRDKYERELLNARNLAEALLQEKTATELALQQAQADLNEAYAIAQRRALFAEQMVAIVSHDLKNPLTAIRMASDFLHRGERTAKELQLLGHIGQSSERAQRMIADLLDFTQARVGQGISIKAAPLDLHEVIHRAVDELRVAFPKATLEHHAQGTGDACLDADRVQQIIGNLVANSVAYGDLQRPITITSQLDNGACEVAVHNYGAVIPEALLAVLFEPMTRGTDQGSDVRSVGLGLYIVRELAKVHGGDVAVRSCATGGTTFTVTFQNT
>NZ_CP019431.1|WP_159935896.1|3830628_3831432_-|diaminopimelate-epimerase
MPLQFVKMHAHGDDFIIVDRRGLDDPITPQLARRLGNRHTGIGFNQLAVVLDCEDAVARIKFWNPNGTPLQTCGSATRGVADRLMHETGSDSVVLRTDRGLLTCVRESGRRVAVNMGEPLLDWASVPLAEATDTRTLPIDGSPAACSMGNPHCTFFVDDINAVDVAAVGPALEAHPLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGVLDATVQVQCDGGTVTVHWDGQGGVVLSGSVEPIMQGTAYVF
>NZ_CP019431.1|WP_159935897.1|3831810_3832314_+|sigma-70-family-RNA-polymerase-sigma-factor
MADEKLQLYLTHRAALLDYAAPIVGCRARAEDVVQEAWLRFSGQDEHTDIRHPASYLYRIVRNLALDLTRRTATERVQPGGDELLNELPSSSASPEREVSSQNELQAVSRALAQLPERTRRAFEMHRLGGLTLQQVAAELGVSTALVHQLVHDALRHCMDCLGADDD
>NZ_CP019431.1|WP_174244823.1|3832423_3833377_+|FecR-domain-containing-protein
MPTEDSANTRRDQALDWLMRVQQAPLDADLRGQVADWCAASEANAKAYRKAERVWQLTGQVAPVEHVPQPAAPTQRPAARTRRARRWVGAAVAACLVVALAPSLLLRWQADYRTGANETRDITLSDGSVVQLDSHSAIAVDIAGNHRDVRLLTGQAFFKVMPDTRKPFHVLTTTLRVTVTGTAFNVDASPDDPSVAVQQGAVNVDDAKARRTLASLVPGQRLSFRAGRAELGSFAPSQAASWRQGQLIADDLPISEVLEQLRRYTPAIIVLRDKQLGAQRVTGVYDLRKPQAALQAVVQPYGAKVRAYSPWLLVLSK
>NZ_CP019431.1|WP_159935899.1|3833514_3836334_+|TonB-dependent-receptor-plug-domain-containing-protein
MTHTLHPFGTPGTWPLRLKKGAAASLLGLCCAFGPLPLALAQPDTPASTHGFNIPPQALAGALIAFGQQSGKQVSVDPQLLKGVSSPGVNGDMSNDAALAYLLQGTGIGWGYQDGALVFHRLPSADAGGATMLDSTVVLGFTEENSFQGATVIDQKAIQAFPGANGDITTLLQMHPSVQFSGAQQNSNAPGEIDPADISINGAKFYQNNFMIDGISINNDLDPGAHGYGETRQFDASPSRSHGIALDADLLQEVKVYDSNVPAEYGGFNGGVVDAITRRPSQDLHGKLSYSMSRSAWTSYHTTEKDQANFDNASNEQYQPEFEKTTVRGMLEGHLTDDFGAIVSFSQKRSVIPLNKYADGYNSPNGDNREDQTRQLDNYMFKAYWNVNDRLSLDGSFIKAPQENTYFRENYKNSGFTNINGGWQGAVKAVWEGDSARWSHTLALTDLNSSRESESNDAIAWFYSSTKNWGLPTTATSRSGEGSYGNLTQTQRGINYKLKADWQGFRWAGAEHAVVTGMELTRNQATWERETEATSVNITRRDNIATCLNDDPLCSIGLLRNGNTRQWANARNVYGAGKLDLTENKYAFFIHDNLQIGKLGLRPGLRLEGDDYMQKQNLAPRFSGDYDFFGDRSTVLVFGANRYYGRNLFKYRLAEGRQGFNTRYTRTTQGGAWTATQVENLNKFSDLKVPYDDEWTLGLDQVWLDTDFRLKYVHRDGKDKIGRASSRVLGLGPAAGFDSIYYTYTNDASSESDNVTLSITPRHEFQWLGSRTSVQAAFDWSRTKDAYGTYESGITADQYANEDVLYDGKRIAYSELPASDFNRPWTARLTTITEIPQWNLTLSNFLRYRGAYEQIIDSSEIVTVNGEDLAVYEAAKVKAAPTWDMRVSWEIPTGKEQALFAAVDITNVTDHVNEIVGSGSSTVTYEVGRQYWLEVGYRF
>NZ_CP019431.1|WP_159935900.1|3836364_3839121_+|insulinase-family-protein
MNKLFAGLLGPLLLCACASPATQAPLPWAPQVVRGQLANGLEYRLVQDSTQTGRLDLRLTVRAGSVDEDDDQVGVAHMLEHLTFRSRAGQTSDLRAQMTALGWVQGRNYNAMTSYDRTQYLLSPMAGTTQTPVALSKLAQLVFAGDYSAADLERERPIVIEEWRGGLGVAQRMNDQRAATQRVGSRYPQHRTIGNETAIREASLSALQRFQQRWYVPNNMVLSVVGDFEPQLLAQQIQQAFGAPVAKALPEREHRELPLDNQLKIFRLQDPQTGSNQVSLLFRLHEPDSRGATAEASRERLIDRMALSALLTQLRRQPLQPGVRSLTAQKTLIGEYSSVLGVAAGVDGAQHDEALKQLLTELERLRQHGFTAQDLDREQSKIRQLAAGMLAKDESRTFEQWVSSLNDAAVQNRPVVAPHQIAQRTLQALGTIDLAALDARLQRWLSSPDQVLQFTAPGNRVVRLPTVDDVQQWRASIAHSSLVAPQSAAPVEPPAAIFTPPSVGAPGSVIGKHSFAAEQVEHWQLSNGDRLVWLRRNAEDGQWRLQAESAAGYERRDVPAWRLQMAAQLGNQSGAAGLEAWRKQHKATLSLEQSATRLQVSATSTASTSALTTLLQSYRQSQVGSAIDDELFSAARDDLLTRVSTRPDAIAAARRELRYGADTWQAPDQQALHVLQSSTLSDDWQQLTQAPVTYYLMADMDPVQLETTVVEHLANIPRGVAQPSRPTLQKPGQRRSDIAVALEPRVVLEASSFSAQPWTPEAAARVAALRELANQQLKQRLRGEASGVYRLRFDSELNPDTQRIESQLSFTCDPQRAEELWALAQQTLAQLGRSVDAKWVASERMELRRQEQKRLLDPTTQWRRLLLSERQWQDPRYLSRQARLPEGLRLELLKPLASQVFPLNNQVLLRVLPKADAP
>NZ_CP019431.1|WP_159935902.1|3839117_3840854_+|ATP-binding-cassette-domain-containing-protein
MKSLRTFYRLAAPFWRQGSQWLGWLMLASIIGMGLLIVQINVLINAWSKSFYDTLGAFDTPALYALMGRYVIYLGAYVLIVVALDWVRKALVLRWRQAMTEQFTHAWLADQAFYRLGLNGEPDNPDQRISEDVDIVADLSVELVASFIINMAQVGAFMSILWQLSGVQTFSVGEYSITLSGYLVWIVLLYTLTGSLITHWVGRPLHRLNVDRQHYEADFRASLLRKREHAEQIALYRGEAVERAHLAKRFQAIAHNWRQLMGRERNLSLFTVSYERVSLIIPVFAALPAFLAKTITLGGLMQIRSAFGAVRESLSWFIKLYPKLMRWSSAVERLGQFEQAIAASRCQAKAPVIGDCLCVSGLDVLRPDAGLLLGDVSVQVTQGEWLLIAGRSGIGKSTLLRTLQGIWPYCRGGWQLPPGRSLLLPQKPYLPSMPLRQLLAYPAVEVPSGVRLVAVLLQVGLPGLVQRLDEQCEWARELSGGEQQRIAVARALLYAPDTLYLDEATNQLDEASAHALLVLLREQLPACTVIGISHQVALAPLFDRIWSPETAQKSGVVAGFGSAAQPSAGQARSPQITQ

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Crispr_ID: NZ_CP019431_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019431_2

5467300-5467387

Orphan

Consensus_repeat	Method
GAGTACAATTTTTTGTACTCTAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019431_2

>merge|NZ_CP019431|2|5467300-5467387|CRISPRCasFinder
GAGTACAATTTTTTGTACTCTAAAAAGAGAAATTCCACAAATATGTTGGAAAACACCGCTTTAGAGTACAGTTTTTTGTACTCTAAAA

>NZ_CP019431|2|2|5467300-5467387|CRISPRCasFinder
GAGTACAATTTTTTGTACTCTAAAA	AGAGAAATTCCACAAATATGTTGGAAAACACCGCTTTA
GAGTACAGTTTTTTGTACTCTAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019431.1\|WP_159937147.1\|5460832_5461120_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937153.1\|5465384_5466278_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937161.1\|5485054_5485384_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937160.1\|5478267_5478492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937162.1\|5486031_5486586_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937158.1\|5471949_5475891_-\|response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_CP019431.1\|WP_159937151.1\|5462592_5464494_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937154.1\|5466324_5466816_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_017530054.1\|5470841_5471957_-\|two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|225971
NZ_CP019431.1\|WP_159937149.1\|5461536_5461935_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937152.1\|5464668_5465316_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937156.1\|5467744_5469283_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271184
NZ_CP019431.1\|WP_159937148.1\|5461288_5461540_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937163.1\|5486780_5488160_-\|sensor-histidine-kinase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|182388
NZ_CP019431.1\|WP_159937150.1\|5462220_5462484_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937146.1\|5460205_5460808_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_159937159.1\|5477878_5478271_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP019431.1\|WP_159937157.1\|5470158_5470587_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019431.1\|WP_024077309.1\|5485467_5485839_+\|PH-domain-containing-protein	unknown	unknown	gnl\|CDD\|377953
NZ_CP019431.1\|WP_159937155.1\|5466873_5467185_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019431.1\|WP_017530054.1\|5470841_5471957_-\|two-component-system-response-regulator	gnl\|CDD\|225971	COG3437, COG3437, Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].	2.9445e-137
NZ_CP019431.1\|WP_159937158.1\|5471949_5475891_-\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	1.82933e-143
NZ_CP019431.1\|WP_159937156.1\|5467744_5469283_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	3.43658e-37
NZ_CP019431.1\|WP_159937159.1\|5477878_5478271_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	8.06272e-33
NZ_CP019431.1\|WP_024077309.1\|5485467_5485839_+\|PH-domain-containing-protein	gnl\|CDD\|377953	pfam08000, bPH_1, Bacterial PH domain. This family contains many bacterial hypothetical proteins. The structures of Structure 3hsa and Structure 3dcx show similarities to the PH or pleckstrin homology domain. First evidence of PH-like domains in bacteria suggests role in cell envelope stress response.	1.29064e-39
NZ_CP019431.1\|WP_159937163.1\|5486780_5488160_-\|sensor-histidine-kinase-N-terminal-domain-containing-protein	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	6.54127e-62

>NZ_CP019431.1|WP_159937155.1|5466873_5467185_-|hypothetical-protein
MNIENRRYIKLPTSDKALEALCKVALTKHSAHTLLIKLCTAADKTETGLHVVYTDKAEIMKWMDCTSENVRRCMNVLIEQKLIAVEHNKAHGMMWIEVKFLNL
>NZ_CP019431.1|WP_159937154.1|5466324_5466816_-|hypothetical-protein
MKNPFNSITFNKLEKNFYAQILTSAMPYYIAVVGFDKVAGQILMAAVENMDRFNECKVNLHDLDKYLDVSENTRKKSLNVLRYMNFIETKNSNRTGGETSFKVNVQFACKGSIEEKMKMPGALNKSFRSAALVKGQICKEKFKKYKQFNNDMKQEGVDGLIPF
>NZ_CP019431.1|WP_159937153.1|5465384_5466278_-|hypothetical-protein
MTKTKIARIDHFSNQLASFEADKFQVIFNPATETLIEKGKAAFCLKAFNAQGVKDQFFTADDLLTDKLFKLMSAKNIEGYDVTIVPKSKTFHYLTISSVTPLKLKDLASLGFAPTMVTTIKGSLHSKLYDLVCRIDKDKADDQYAYNAQMFVWALNKSVSTLRVPRPKSLEAPIHAAGFKHHGTGSFVTCNRSLKRSCTECVDQIQKVRGMKLTAPAVGDGSPDDTAFYLNALRETLMYKSRLLGDAVIDDVIDRRVARQAFAEHYSGDDVMAFLMSLGHVKARENALEHAVKLMTF
>NZ_CP019431.1|WP_159937152.1|5464668_5465316_+|hypothetical-protein
MQIQNGITRLTNKPLLKMRTTLLQTLSRMEKRENGALKKSLLLAMLLIALMFMTYHLQVAYSGTELIPLPSDPNEAFQMLLLGPPLKFLLLCFLFGMGYSVCGISLSLAFYLPRFFILFYRTRKHENRTLAQYTKSGIDLNDPKLKFEISEKFKEDNNKDDDLFIENLKTEYERKQAIEDRRLKEQLEKDLRSQEHLHSLEVKRIYDEYHSSCKK
>NZ_CP019431.1|WP_159937151.1|5462592_5464494_+|hypothetical-protein
MQKSIIAISTLSALLIANTASASITWPAEQTYEESLGAETWSTSGGCKSGQQISMRRVFFMNKDGSKNYVNKGNGVFVKGSESYGDGFEILSKCYDSTNTGIEEAKISQVVSEVISQKCEKPLETGSINKRRAYTLWSPDRVNSNFKTGFNVMVTSTCQLRETKVFDNPVCATKNPDYPLGAIYGTWTRTIKDGVPSEWALNQFYPNSNNCFKPVTETNNLVCPTGYAGKKVESRTYDLWTTGSKKNDSGYVVTQDTCSKTENKQLVQENCTVVNPAYPLGTTNGLYSRTVTPAGIASDWKLTVLISNACYYMKDTVTSTNEVSCPTGQSGKIIRETHLKLKQYISWSQNDSSYIVETENSCKASGPVTVEVKPGSETVSCDSYYGTQAGTYTGNVTKTGDNITIFDPISGATNTTFQTKSEDTTSCIKEITTTTKEIIEEECPAGFLGKITKYLVKAESSTGTVYPYGTTPILENNSCIAVSVNEELTIENAPHLQDSVLSNLSFTTTSISKNDSIINELNKINTSELEDKTYIMNINADNLSEGAFDKNKITNLVKTFKTKLGQSANVKLSSVPVTLDKYINQDGLTQSRIRLERLSLSGTSVKDGTVTVKYVSLAKATPEHFSFTVKVFE
>NZ_CP019431.1|WP_159937150.1|5462220_5462484_+|hypothetical-protein
MKIRLLTFAALALLSSLSNANDSNQNKSGKQNIDEQNLIETTRQIFDSVGFVDMDAQSRSFLSTDFKGIPIEDYEDTNDYDAHIDAS
>NZ_CP019431.1|WP_159937149.1|5461536_5461935_-|hypothetical-protein
MSRPIRNRYNPRERIQLDFDVATCVLNLNQHLQVFRGLSVADDRETFLRTLGEAARNAMHVHQIIACWFGLYCLGEDGEWQEYCRAFVEKFVDVDTGFAEVALADAVSYSQSLLESLDAARIQLANGAEKGV
>NZ_CP019431.1|WP_159937148.1|5461288_5461540_+|hypothetical-protein
MDKEFSYNPLIPCIVLHNGQDVGAMVDGKLYRFDSSLTAKNQHAEAGFLVDNVLFQYGEPIGHLEGRKLIIDSRSEVLELVEA
>NZ_CP019431.1|WP_159937147.1|5460832_5461120_+|hypothetical-protein
MKLKPLHLVADVKKPCAYRPNVSTIVLFGLEVEGEHEPPIYMEIRFLDYDSQQIEGDHLMHSLEEALESAKQDYGIFRDDWREMNEVEIARIPWS
>NZ_CP019431.1|WP_159937146.1|5460205_5460808_+|hypothetical-protein
MSIRIPFCLLLLPMLAGCQYLPHTNYFVAPDNESNPAWIRIVNFTQHAAIYQSVNGVKTGGVVRTGLLPFTHTQDIGMPKAGQNLTWDYYESTIRPGLETSVYTSWEGSRTRTCFVTTKFTPEAGRYYQFLLTSGSSGTCTLYPTLIERDKESAGWHLVPNKNVTYEYDGPTAKTFYTNSKFENSNYQPPPELYPGTDVR
>NZ_CP019431.1|WP_159937156.1|5467744_5469283_-|tyrosine-type-recombinase/integrase
MAVDNLKNIDGTWYVRVAIPKDVRSAFGNRTEFIKSLKTGRKSEALVLRTKDLHEFKNRIAVERRKLVIEQEMQTLASLPVDVKFDEMFQNLGEIKRRLMERKEDRKKAFQDSEFEDIQAVKEIDSHHSFLNLLAEEKEALGEDLHPALASILTELNEFQSKPSKTFKQSEWLLEKLENTLELGSFHGYAETHAEKEQVKTFIAEPTKFVKRHPLTEKNFVEFHKYEVKRKVTLRSIDRHVKRLNMLKSFLEKQKFELDYESVRVFLESLECADKTKLQYLCSYNAFYKFMFNNVDFRQKYPVNPFANHAVAKIRRGARKEDARKGFTKEQVKALYSNAISQEKTRLADLIRLGCYTGARIEEICQIKVEDLVEVDGVYCIDIKQSKTNAGERLVPIHSELLTLVKRLKAESKDGYLLKTNRGGKYGTKSKEMSSEFSAFKIALGYPKDLVFHSFRHTMVTELERADTKNILVMSIVGHDVGGSLSMTFDRYSDGPTPMAKKEAIEKVRFDI
>NZ_CP019431.1|WP_159937157.1|5470158_5470587_-|hypothetical-protein
MLPSDIEEWLQSNSSSGYRAHLLAHQADVWFYVTTLEIEGTELADLYFRHGAMPVRGWYELIEIDQVEQVTTYAINELGVPVGYLALTGVVGQGIVLYNRSSQAVFDVEFGQFDLLLKGELAPIATTFSGFLRWCRDRDQDD
>NZ_CP019431.1|WP_017530054.1|5470841_5471957_-|two-component-system-response-regulator
MSETLNYSLSPIILIVDDTPENITLINGLLKDIYRTRVAISGERALKAAVQEPRPDLILLDIMMPDLSGYEVAEQLKRDPRTADIPIIFITAMATMEDEILGLQMGAVDYITKPINPPIVLARVETQLKVKAAADFLRDQKAYLEQEVQRRTAEVIAIQDVTIQAMTSLAETRDNETGNHIRRTQHYVRLLAEMLREHPRFQHFLNDESIRLLFKSAPLHDIGKIGIPDGILLKPGRLTPEEFETMKTHTVLGRDAIRNAEEQLGTSVAFLRLAKEIAYSHHEKWDGTGYPDGLSADDIPISARLMAVADVYDALISRRVYKKGMSHDQALEIIRQGCATHFDPEICEVFLANHEQFQAIAVRFADSGQDG
>NZ_CP019431.1|WP_159937158.1|5471949_5475891_-|response-regulator
MDREQLPTSRCILKTKPRWGALLALGGLLVLSMPCVEARTLSQIRESGVLRICVAGSSASFYRTNAEAFAQSLGLRPQVTELPSFDAQFHDDRGETVREASYDPKLLADGSCDLYPNDLQIVPWRETKMLLVPYYRVRNLVIAHRSNQSLGNEVSDLLGLTAAVQKGTGYEQWIDEANRGPLSSQPVRIVYAPTEQAVKLVADAKVDFTVLGSESALRWAREDPERLSIAFPVSEATSVGWGVARNAPDLARALERFFQSSNRIDSPLDASWRRYYRVSLMEYRLFEESLNEDGLDIKTVMSWAIPSLVAVLLLLGAMLAWNRRLNREVDERKRVAAELAEREAFTRALMDTSPASLVLADRNGVVREVSQRFSQATGYVNEDLLGRNATSLYVDPEERERFLELLTRNGKVENFETRLLHKNGSILWVLVGASFVTIHGETLVASWVRDVTDHHAAAVALSEERARLQAILDTSPINIAFSTQGVIRFANPRFCETFGVGVGDAASQIYANGHDREAIVERLTDDGIAKDQEVPMRDRQGRERTILVTYLPIQIQGEQGLLHWLQDITERKAVEQVQQRAKEIAEEATRAKSDFLANMSHEIRTPMNAIIGMSYLALKTSLDQRQRDYVSKIHNAGTSLLGIINDILDFSKIEAGKLSVEAVPFEIDAVLDNVSSLIAQKAYDRGIELLFDRASDVPGTLLGDPLRLGQVILNLVGNAVKFTEHGQVTVVVRNLGRTGDKVQLQVRVRDTGIGMTPEQAGRLFEAFAQADSSTTRQFGGTGLGLAISKRIVELMSGTIAVDSEPGNGSTFSFSVWLGLDQHMRTQRQIVPAELAGARVLVVDDNADARQILSDMLRVAGLSPVAVASGEAALESLRGAAADDPFRVLLVDWQMPEMDGIETTRRALGLQPTLYAVMVSAFGHDEMHAAAQAAGIRAFLVKPVNQSSLVEVLVNLFAPQTGVVAVTVPIAQAQVLAGVRLLVAEDNEINQQIARELLEAAGALVEVAGNGCEALSMLAAAQYDAVLMDVQMPQMDGLETTRRIRVGPHCAQIPVIAMTAHARVEDRERCIEAGMVDHVTKPVDPQALIATVLRWVVPRSAAVEPSSAASGEERLPDIPGLDSADGLRRVAGNRQLYIKLLGQFADRRALEGQALGNALRAGDRATAERMAHTVKGVAGNLGFSGLQVMAGKLETAIRAHAESDALVNELIEALSLAVHAIRQALGSGQAAPAVVSSVDWAQHAIALMHLLEANDGAAPDYMEQYADSLRGALGQDSFEQLMNEVNNFDFEAARLTLKRASTARDTPCWREHHE
>NZ_CP019431.1|WP_159937159.1|5477878_5478271_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MIRIDSIWLATEPMDMRAGTEKALARVVAVFGAAQPHCAYLFANRRGNRMKVLVHDSLGVWLAVRRLHQGKLSWPSSRCGDQMELNAEQLQALVVGLPWQRLASSCFNMSSVLIKKCCTKRAATSSSFMR
>NZ_CP019431.1|WP_159937160.1|5478267_5478492_-|hypothetical-protein
MAPLNANVIRKWLPLYRDQPPAPPPAFVPVKVAPKRSAEGSVIIELPFGEQAIMVKWPSSDPEGCARFVRELTQ
>NZ_CP019431.1|WP_159937161.1|5485054_5485384_+|hypothetical-protein
MELTLEAAALFALKLMHETDDGSPLLRDDLVMDGYEREVFGLLVRQGDLPTIQLKLRACVDQALAALGGADTVLGRELQRLAGEVQKASTLEELNPPLEALKDYLKAIQ
>NZ_CP019431.1|WP_024077309.1|5485467_5485839_+|PH-domain-containing-protein
MIDFNNKGFFKLKQNNEYAERVSALLLDGEEVIDAYKAMRDGVVFTTKRIIAVNVQGITGSKKDFTSLPYKNIVAYSVETSGTFDLDSELEIYFSSLGKVKFEFTGKTSIVEISRLISKHLLT
>NZ_CP019431.1|WP_159937162.1|5486031_5486586_-|hypothetical-protein
MKRIALLSLALALGACQSNQRDSSPSLFKDGIQLRQKTVAVDTEHAKVIMKASGGTNPVDFAIHREGDPDQRMEILGTVMDTGEGKIFNWIAKLNQTVASAGFKRFPQLEIQADPGKKLTVSSTARSQGNGIYYRCGPLHSTFSPQKAKVYLVEFQFKGERCGQVVYDVTETGQRVLVEGVTKG
>NZ_CP019431.1|WP_159937163.1|5486780_5488160_-|sensor-histidine-kinase-N-terminal-domain-containing-protein
MTSVRARILVPVLVLILLGDALISWLVLRDSHHEIEEVYDAQLAQSARLLQGVLRQRDPGEADWERLYQAFDHAMSRVGEEGVAHPYETRLTFQVWRSDGQLLVRSAEAPVLAAPPATLGSHDIMDNGNDWCAFLLADPQQGLLIWVGERDDIRQDVIQRIMRHTLWPTLIGVPLLTLLIWLLIGWGLKPLRAMALSIRGRNGDTLQPLHLKPLPTDLEPMQTALNRLLVQVDDLLERERRFIADAAHELRTPLAILRIHAQNAKSAQTVEQRREALEFLVSGVDRATRIASQLLTMARIEPQLNNPVRSRVQLTALVREELAELTPLAMEKGVELVLEGHEECWVETEPVALAIALQNLVTNALNFSPPGSEVKVVIGAYCLSVQDQGPGIDEAQAGRLFERFYSRGNANGAGLGLAIVEMIVGKIGSRLALHNLERGGLCARLVFNEEIQSRPPSTG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1561596 : 1570031

Synechococcus_phage(28.57%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159933303.1\|1561596_1562709_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.9e-34	30.7
WP_159933304.1\|1562717_1563563_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_012722614.1\|1563617_1564091_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_159933305.1\|1564087_1565146_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_159933306.1\|1565133_1565883_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.5e-62	49.8
WP_169899534.1\|1565924_1566560_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	3.5e-41	49.3
WP_159933307.1\|1566766_1567603_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.2e-06	33.3
WP_159933308.1\|1567708_1568713_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
WP_002554837.1\|1568865_1569075_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_003172320.1\|1569464_1570031_+	dCTP deaminase	S5VM63	Pseudomonas_phage	6.2e-74	73.3

DBSCAN-SWA_2

2736428 : 2814032

Tupanvirus(40.0%)

tail,plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159932780.1\|2736428_2737688_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.4e-41	41.2
WP_159934835.1\|2737806_2738499_-	NUDIX hydrolase	NA	NA	NA	NA
WP_159934837.1\|2738645_2739293_+	isochorismatase family protein	NA	NA	NA	NA
WP_159934839.1\|2739304_2740522_+	nicotinate phosphoribosyltransferase	NA	NA	NA	NA
WP_159934841.1\|2740523_2741333_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.7e-56	46.3
WP_159934843.1\|2741491_2742328_+	hypothetical protein	NA	NA	NA	NA
WP_159934845.1\|2742305_2746646_+	NACHT domain-containing protein	NA	NA	NA	NA
WP_159934847.1\|2746849_2748205_+	MATE family efflux transporter	NA	NA	NA	NA
WP_159934849.1\|2748211_2748787_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_159934851.1\|2748928_2750101_+	MFS transporter	NA	NA	NA	NA
WP_159934853.1\|2750103_2751102_-	Camphene synthase	NA	NA	NA	NA
WP_159934855.1\|2751413_2761700_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	2.9e-84	25.6
WP_159934857.1\|2761696_2764870_+	amino acid adenylation domain-containing protein	A0A2K9L3I8	Tupanvirus	5.4e-50	25.9
WP_159934858.1\|2765043_2767476_+	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_159934860.1\|2767608_2776314_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	5.3e-87	25.8
WP_159934862.1\|2776325_2779712_-	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	1.1e-85	25.6
WP_159934864.1\|2779763_2781419_-	cyclic peptide export ABC transporter	A0A1V0SD74	Indivirus	4.1e-09	21.1
WP_159934866.1\|2781616_2782495_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	1.3e-38	39.0
WP_159934868.1\|2782526_2783795_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_159934870.1\|2783813_2785157_-\|tail	pyoverdine-tailoring dipeptidase-like protein PvdM	NA	NA	NA	NA
WP_159934872.1\|2785300_2786929_+	PvdJ/PvdD/PvdP-like protein	NA	NA	NA	NA
WP_159934874.1\|2787476_2787980_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_159934876.1\|2788013_2789552_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_159934878.1\|2789575_2790931_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_159934880.1\|2790927_2791611_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_159934884.1\|2793363_2793855_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_159934886.1\|2793993_2796660_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-91	29.8
WP_159934888.1\|2796662_2799041_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.9e-19	34.3
WP_159934890.1\|2799049_2799805_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_159934892.1\|2799876_2800305_+	YceK/YidQ family lipoprotein	NA	NA	NA	NA
WP_159934894.1\|2800360_2800876_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_159938037.1\|2801051_2801558_+	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_159934896.1\|2801545_2803891_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_159934898.1\|2803890_2804154_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_159938038.1\|2804261_2805278_+	hypothetical protein	NA	NA	NA	NA
WP_159938039.1\|2805330_2808633_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_159934900.1\|2808629_2810216_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_159934902.1\|2810240_2812010_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_159934904.1\|2811973_2813071_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_159934906.1\|2813051_2813588_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_159934908.1\|2813591_2814032_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_3

3926065 : 3985444

uncultured_Caudovirales_phage(35.29%)

plate,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159936039.1\|3926065_3926890_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.8e-104	71.2
WP_159936041.1\|3927195_3927798_+	DUF1282 family protein	NA	NA	NA	NA
WP_159936043.1\|3927926_3928421_+\|protease	SprT family zinc-dependent metalloprotease	NA	NA	NA	NA
WP_159936044.1\|3928444_3929620_-	CoA transferase	NA	NA	NA	NA
WP_159936046.1\|3929777_3930170_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	3.7e-57	84.6
WP_159936048.1\|3930171_3930522_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	8.9e-39	67.5
WP_159936049.1\|3930521_3930800_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.2e-25	57.6
WP_159936051.1\|3930796_3931132_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	7.2e-46	78.4
WP_159936053.1\|3931128_3932130_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	3.3e-163	84.4
WP_159936055.1\|3932218_3933214_+	glutathione S-transferase C-terminal domain-containing protein	NA	NA	NA	NA
WP_159936056.1\|3933275_3934670_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_159936058.1\|3934670_3935951_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.3e-97	53.0
WP_159936060.1\|3935967_3936342_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	3.9e-08	37.3
WP_159936061.1\|3936338_3937664_-	AAA family ATPase	G3MBE0	Bacillus_virus	8.3e-77	39.0
WP_159936062.1\|3937687_3938311_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_159936064.1\|3938365_3940774_-	DNA translocase FtsK 4TM domain-containing protein	A0A218M9A2	Mycobacterium_phage	2.9e-88	51.7
WP_159936066.1\|3941270_3941951_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_159936067.1\|3942007_3942715_+	arginyltransferase	NA	NA	NA	NA
WP_002553999.1\|3942815_3943034_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_159936068.1\|3943278_3945549_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.6
WP_010567912.1\|3945578_3945947_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	8.3e-11	42.0
WP_159936069.1\|3946172_3946481_+	cold shock domain-containing protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	4.8e-12	58.3
WP_159936070.1\|3946559_3947816_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	2.0e-16	77.8
WP_159936071.1\|3948310_3950536_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_159936072.1\|3950593_3951466_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_159936073.1\|3951538_3952435_-	EamA family transporter	NA	NA	NA	NA
WP_159936074.1\|3952610_3953057_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_159936075.1\|3953116_3954241_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_159936076.1\|3954237_3954861_+	high frequency lysogenization protein HflD	NA	NA	NA	NA
WP_159936077.1\|3954986_3956357_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.2e-110	48.0
WP_159936078.1\|3956440_3957607_+	cupin domain-containing protein	NA	NA	NA	NA
WP_159936079.1\|3957599_3958022_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_159936080.1\|3958172_3958910_+	secretin	NA	NA	NA	NA
WP_010458877.1\|3959395_3960721_+	isocitrate lyase	NA	NA	NA	NA
WP_003219575.1\|3961378_3961792_+	NADH-quinone oxidoreductase subunit A	NA	NA	NA	NA
WP_012724951.1\|3961802_3962477_+	NADH-quinone oxidoreductase subunit B	NA	NA	NA	NA
WP_159936081.1\|3962548_3964333_+	NADH-quinone oxidoreductase subunit C/D	NA	NA	NA	NA
WP_159936082.1\|3964335_3964833_+	NADH-quinone oxidoreductase subunit NuoE	NA	NA	NA	NA
WP_159936083.1\|3964829_3966185_+	NADH-quinone oxidoreductase subunit NuoF	NA	NA	NA	NA
WP_159936084.1\|3966320_3969035_+	NADH-quinone oxidoreductase subunit NuoG	NA	NA	NA	NA
WP_003174724.1\|3969031_3970039_+	NADH-quinone oxidoreductase subunit NuoH	NA	NA	NA	NA
WP_003174725.1\|3970050_3970599_+	NADH-quinone oxidoreductase subunit NuoI	NA	NA	NA	NA
WP_003174726.1\|3970608_3971112_+	NADH-quinone oxidoreductase subunit J	NA	NA	NA	NA
WP_003174727.1\|3971114_3971423_+	NADH-quinone oxidoreductase subunit NuoK	NA	NA	NA	NA
WP_159936085.1\|3971419_3973273_+	NADH-quinone oxidoreductase subunit L	NA	NA	NA	NA
WP_003232072.1\|3973337_3974870_+	NADH-quinone oxidoreductase subunit M	NA	NA	NA	NA
WP_159936086.1\|3974877_3976341_+	NADH-quinone oxidoreductase subunit NuoN	NA	NA	NA	NA
WP_159936087.1\|3976415_3977762_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_159936088.1\|3977812_3979774_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	4.5e-47	30.6
WP_159936089.1\|3979918_3982555_-	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	5.7e-85	30.5
WP_159936090.1\|3982547_3983585_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_159936091.1\|3983569_3985444_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

4073884 : 4109245

Escherichia_phage(25.0%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159936161.1\|4073884_4074856_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_159938068.1\|4074852_4077198_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_159936162.1\|4077269_4078058_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_159936163.1\|4078084_4078576_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_159936164.1\|4078575_4079118_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_159936165.1\|4079136_4079679_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_174244876.1\|4079672_4080164_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_159936167.1\|4080387_4081482_+	cell division protein ZapE	NA	NA	NA	NA
WP_159936168.1\|4081522_4082824_+	protein kinase	NA	NA	NA	NA
WP_032889871.1\|4082901_4083609_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_159936169.1\|4083718_4085044_-	MFS transporter	NA	NA	NA	NA
WP_159936170.1\|4085042_4085180_+	hypothetical protein	NA	NA	NA	NA
WP_159936171.1\|4085300_4086197_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_159936172.1\|4086166_4087027_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_159936173.1\|4087140_4088268_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_159936174.1\|4088264_4089092_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_159936175.1\|4089206_4089764_+	cytochrome b/b6 domain-containing protein	A0A0U2QLA7	Escherichia_phage	4.3e-19	40.2
WP_159936176.1\|4089753_4090644_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_159936177.1\|4090701_4092741_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_159936178.1\|4092953_4094084_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_159936179.1\|4094088_4095123_+	AraC family transcriptional regulator ligand-binding domain-containing protein	NA	NA	NA	NA
WP_159936180.1\|4095450_4096446_+	pyruvate dehydrogenase	NA	NA	NA	NA
WP_159936181.1\|4096484_4096955_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_159936182.1\|4097100_4099761_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_159936183.1\|4099762_4100542_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_159936184.1\|4100631_4101531_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_159936185.1\|4101648_4102812_+	MFS transporter	NA	NA	NA	NA
WP_159936186.1\|4102875_4104750_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_003174819.1\|4104981_4105254_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	1.8e-18	59.6
WP_159936187.1\|4105403_4107800_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	3.0e-218	51.4
WP_159936188.1\|4107961_4109245_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.6e-138	59.7

DBSCAN-SWA_5

4318030 : 4359167

Pseudomonas_phage(50.0%)

lysis,integrase,terminase,holin,capsid

attL 4316486:4316536|attR 4358358:4358408

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4316486:4316536	attL	NA	NA	NA	NA
WP_159936337.1\|4318030_4319821_-	hypothetical protein	W6MW31	Pseudomonas_phage	2.9e-48	52.8
WP_159936338.1\|4319891_4322441_-	hypothetical protein	W6MWW8	Pseudomonas_phage	0.0e+00	74.0
WP_174244879.1\|4322437_4324150_-	hypothetical protein	W6MVE3	Pseudomonas_phage	5.7e-171	59.1
WP_159938081.1\|4324191_4326153_-	hypothetical protein	W6MYA2	Pseudomonas_phage	2.4e-205	56.9
WP_159936339.1\|4326284_4326746_-	hypothetical protein	K4NYZ0	Pseudomonas_phage	8.5e-21	46.4
WP_159936340.1\|4326757_4327225_-	DUF2833 domain-containing protein	A0A2R2ZGD5	Ralstonia_phage	4.6e-22	39.6
WP_159936341.1\|4327211_4329557_-	hypothetical protein	K4NWU8	Pseudomonas_phage	1.6e-208	47.5
WP_159936342.1\|4329553_4330153_-	hypothetical protein	A0A1B1IRI7	uncultured_Mediterranean_phage	1.6e-11	32.9
WP_159936343.1\|4330211_4330586_-	hypothetical protein	NA	NA	NA	NA
WP_095009777.1\|4330578_4330971_-	hypothetical protein	T1SA71	Salmonella_phage	2.7e-44	72.1
WP_095009776.1\|4331008_4332007_-\|capsid	phage capsid protein	T1S9H9	Salmonella_phage	1.5e-115	61.4
WP_159936344.1\|4332036_4332741_-	hypothetical protein	T1SAP9	Salmonella_phage	5.8e-21	37.9
WP_159936345.1\|4332737_4333031_-	hypothetical protein	NA	NA	NA	NA
WP_159936346.1\|4333030_4334725_-	hypothetical protein	K4NWH1	Pseudomonas_phage	2.6e-139	44.9
WP_159936347.1\|4334726_4335077_-	hypothetical protein	NA	NA	NA	NA
WP_159936348.1\|4335078_4336590_-\|terminase	terminase	K4NWT7	Pseudomonas_phage	8.3e-198	66.9
WP_044272767.1\|4336567_4337062_-\|terminase	terminase small subunit	K4NZ30	Pseudomonas_phage	2.3e-32	47.0
WP_159936349.1\|4337065_4337533_-\|lysis	lysis protein	B5TK84	Pseudomonas_phage	5.4e-07	34.6
WP_159938082.1\|4337544_4337976_-	hypothetical protein	A0A1B0VMG3	Pseudomonas_phage	8.5e-31	87.3
WP_159936350.1\|4338002_4338626_-	glycoside hydrolase family 19 protein	A0A2H4J3Y3	uncultured_Caudovirales_phage	1.1e-52	55.3
WP_159936351.1\|4338625_4338910_-\|holin	phage holin family protein	H2BD74	Pseudomonas_phage	4.4e-20	62.4
WP_159936352.1\|4338902_4339298_-	hypothetical protein	Q9MC43	Pseudomonas_phage	1.5e-34	57.3
WP_159936353.1\|4339446_4340328_-	hypothetical protein	J7HXH6	Pseudomonas_phage	4.5e-79	52.9
WP_159936354.1\|4340368_4341049_-	HNH endonuclease	A0A220GJG3	Streptococcus_phage	8.7e-22	44.9
WP_159936355.1\|4341058_4341502_-	RusA family crossover junction endodeoxyribonuclease	H2BD71	Pseudomonas_phage	1.4e-52	69.0
WP_159936356.1\|4341498_4341945_-	hypothetical protein	A0A0U4B0K0	Pseudomonas_phage	7.7e-11	40.4
WP_159936357.1\|4341937_4342657_-	Replication protein P	A0A2H4J1T4	uncultured_Caudovirales_phage	6.3e-55	49.8
WP_159936358.1\|4342653_4343412_-	hypothetical protein	A0A127KNX8	Pseudomonas_phage	3.0e-23	35.1
WP_159936359.1\|4343411_4343720_-	transcriptional regulator	A0A2H4J960	uncultured_Caudovirales_phage	1.2e-42	90.2
WP_159936360.1\|4343722_4343911_-	helix-turn-helix domain-containing protein	A0A0S2SYB8	Pseudomonas_phage	1.8e-09	50.9
WP_159936361.1\|4344000_4344717_+	Cro/Cl family transcriptional regulator	A0A0S2SYF7	Pseudomonas_phage	3.9e-49	43.1
WP_159936362.1\|4344718_4345033_+	hypothetical protein	NA	NA	NA	NA
WP_159936363.1\|4345724_4346012_+	hypothetical protein	A0A2H4J6R2	uncultured_Caudovirales_phage	6.6e-48	92.6
WP_159938083.1\|4346059_4346263_+	hypothetical protein	A0A2H4J7V1	uncultured_Caudovirales_phage	2.7e-19	72.7
WP_159936364.1\|4346521_4346713_-	hypothetical protein	NA	NA	NA	NA
WP_159936365.1\|4346725_4347010_+	hypothetical protein	NA	NA	NA	NA
WP_159936366.1\|4347064_4347826_+	hypothetical protein	A0A2H4IZU8	uncultured_Caudovirales_phage	4.4e-91	68.1
WP_159936367.1\|4347812_4349468_+	YqaJ viral recombinase family protein	A0A2H4J6P1	uncultured_Caudovirales_phage	6.1e-154	64.9
WP_017847647.1\|4349470_4349671_+	hypothetical protein	A0A2H4J6K7	uncultured_Caudovirales_phage	2.3e-23	83.3
WP_159936368.1\|4349680_4350748_+	DNA translocase FtsK	A0A2H4J7E6	uncultured_Caudovirales_phage	6.9e-90	53.5
WP_159936369.1\|4350809_4351421_+	3'-5' exonuclease	A0A2H4J7C9	uncultured_Caudovirales_phage	1.9e-105	90.1
WP_159936370.1\|4351449_4351764_-	hypothetical protein	NA	NA	NA	NA
WP_174244880.1\|4351892_4353683_+	DNA cytosine methyltransferase	A0A0U1T6D1	Pseudomonas_phage	1.4e-220	74.2
WP_159936372.1\|4353679_4354402_+	hypothetical protein	A0A2H5BFW5	Vibrio_phage	2.3e-57	48.1
WP_159938084.1\|4354544_4354724_+	hypothetical protein	A0A2H4J405	uncultured_Caudovirales_phage	1.5e-18	84.5
WP_159936373.1\|4354720_4355341_+	hypothetical protein	Q5QF30	Pseudomonas_virus	6.9e-42	47.4
WP_159936374.1\|4355337_4355805_+	methyltransferase domain-containing protein	A0A0N7IRF6	Acinetobacter_phage	3.6e-59	63.8
WP_159936375.1\|4355931_4356738_-	hypothetical protein	NA	NA	NA	NA
WP_159936376.1\|4357094_4358291_+\|integrase	tyrosine-type recombinase/integrase	A0A059VF45	Pseudomonas_phage	1.2e-156	69.1
WP_003219935.1\|4358527_4358884_-	MerR family transcriptional regulator	NA	NA	NA	NA
4358358:4358408	attR	NA	NA	NA	NA
WP_002553164.1\|4358864_4359167_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	1.8e-11	38.9

DBSCAN-SWA_6

4748619 : 4766169

uncultured_Caudovirales_phage(95.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159936661.1\|4748619_4749450_+	hypothetical protein	A0A2H4J5U3	uncultured_Caudovirales_phage	1.0e-77	57.1
WP_159936662.1\|4749450_4749681_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_159936663.1\|4750127_4750802_+	hypothetical protein	NA	NA	NA	NA
WP_159936664.1\|4751087_4751603_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_159936665.1\|4751932_4752397_-	GNAT family N-acetyltransferase	A0A2H4J155	uncultured_Caudovirales_phage	3.2e-76	96.7
WP_159936666.1\|4752525_4752948_+	arsenate reductase ArsC	A0A2H4J437	uncultured_Caudovirales_phage	2.3e-73	97.9
WP_174244831.1\|4752956_4753301_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	1.0e-58	98.2
WP_159936667.1\|4753325_4754609_+	arsenical efflux pump membrane protein ArsB	A0A2H4J144	uncultured_Caudovirales_phage	9.1e-230	99.1
WP_159936668.1\|4754625_4755096_+	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	8.2e-80	98.7
WP_159936669.1\|4755143_4755857_+	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	1.0e-129	97.9
WP_158832412.1\|4755877_4756300_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.0e-73	97.9
WP_159936670.1\|4756337_4757411_+	NAD(P)-binding domain-containing protein	A0A2H4J2Q2	uncultured_Caudovirales_phage	2.5e-156	95.1
WP_055135313.1\|4757444_4757990_-	N-acetyltransferase	A0A2H4J136	uncultured_Caudovirales_phage	2.7e-90	90.6
WP_159936671.1\|4758213_4759383_-	chromate efflux transporter	NA	NA	NA	NA
WP_055135311.1\|4759624_4760827_-	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	8.3e-193	97.3
WP_055135310.1\|4761137_4761668_-	inorganic diphosphatase	A0A2H4J8U1	uncultured_Caudovirales_phage	1.1e-96	97.2
WP_008438039.1\|4761670_4762024_-	DUF190 domain-containing protein	A0A2H4J2R0	uncultured_Caudovirales_phage	1.5e-57	94.9
WP_055135309.1\|4762034_4762418_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	5.4e-53	96.4
WP_055135308.1\|4762753_4763089_-	hypothetical protein	A0A2H4J9H6	uncultured_Caudovirales_phage	3.7e-34	75.7
WP_159936672.1\|4763555_4764017_+	3'-5' exoribonuclease	A0A172JI25	Bacillus_phage	3.3e-09	31.4
WP_058419434.1\|4764107_4764587_-	transcriptional regulator	A0A2H4J450	uncultured_Caudovirales_phage	3.8e-40	57.9
WP_159936673.1\|4764799_4765207_+	hypothetical protein	A0A2H4J161	uncultured_Caudovirales_phage	6.9e-67	93.8
WP_159936674.1\|4765248_4765695_+	hypothetical protein	A0A2H4J163	uncultured_Caudovirales_phage	9.6e-78	95.3
WP_159936675.1\|4765785_4766169_+	hypothetical protein	A0A2H4J8C3	uncultured_Caudovirales_phage	2.8e-62	90.6

DBSCAN-SWA_7

5501435 : 5510084

uncultured_Caudovirales_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159937174.1\|5501435_5502464_-	transporter substrate-binding domain-containing protein	A0A1B1IT51	uncultured_Mediterranean_phage	2.4e-71	38.9
WP_159937175.1\|5502686_5503937_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	A0A1V0SKB7	Klosneuvirus	1.4e-22	27.3
WP_159937176.1\|5504068_5504785_+	hypothetical protein	NA	NA	NA	NA
WP_159937177.1\|5504969_5506061_-	pyridoxal phosphate-dependent aminotransferase	A0A1X6WGT4	Pacmanvirus	1.8e-13	24.5
WP_159937178.1\|5506204_5507560_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-55	38.3
WP_159937179.1\|5507867_5508470_+	helix-turn-helix domain-containing protein	A0A2H4J122	uncultured_Caudovirales_phage	9.3e-60	60.6
WP_159937180.1\|5508456_5509335_+	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	4.3e-106	67.8
WP_159937181.1\|5509385_5510084_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	5.1e-94	71.7

DBSCAN-SWA_8

6049696 : 6112221

Tupanvirus(20.0%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159937544.1\|6049696_6050197_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_159937545.1\|6050369_6051257_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_159937546.1\|6051253_6051826_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_159937547.1\|6051958_6052585_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_159937548.1\|6052581_6053259_+	anti-sigma factor	NA	NA	NA	NA
WP_159937549.1\|6054220_6054580_+	hypothetical protein	NA	NA	NA	NA
WP_005792122.1\|6054622_6055822_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.4e-11	29.3
WP_016977808.1\|6056199_6057057_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_159937550.1\|6057067_6057700_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_159937551.1\|6057812_6060830_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
WP_159937552.1\|6060826_6061129_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA
WP_010207084.1\|6061144_6062395_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_159937553.1\|6062417_6063671_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	9.5e-99	52.8
WP_159937554.1\|6063907_6064636_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_159937555.1\|6064726_6065767_+	threonine aldolase	NA	NA	NA	NA
WP_159937556.1\|6065841_6066942_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_159937557.1\|6067224_6068520_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_159938122.1\|6069434_6069929_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_159937558.1\|6069903_6070284_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_174244845.1\|6070270_6070777_+	type II secretion system protein	NA	NA	NA	NA
WP_159937559.1\|6070852_6072361_+	lytic polysaccharide monooxygenase	NA	NA	NA	NA
WP_159937560.1\|6072579_6073011_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_159937561.1\|6073017_6073482_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_159937562.1\|6073478_6074663_+	type II secretion system F family protein	NA	NA	NA	NA
WP_159937563.1\|6074667_6076305_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_159937564.1\|6076285_6077011_+	hypothetical protein	NA	NA	NA	NA
WP_159937565.1\|6077007_6077565_+	hypothetical protein	NA	NA	NA	NA
WP_159938124.1\|6077567_6078104_+	hypothetical protein	NA	NA	NA	NA
WP_159937566.1\|6078100_6078592_+	hypothetical protein	NA	NA	NA	NA
WP_159937567.1\|6078610_6080536_+	general secretion pathway protein GspD	NA	NA	NA	NA
WP_159937568.1\|6080568_6081339_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_159937569.1\|6081349_6082570_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_159937570.1\|6082569_6084510_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_159937571.1\|6084667_6086728_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_159937572.1\|6086743_6087274_-	hydrocarbon binding protein	NA	NA	NA	NA
WP_003176573.1\|6087352_6088330_-	membrane dipeptidase	NA	NA	NA	NA
WP_032884009.1\|6088549_6088951_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_159937573.1\|6088992_6089409_+	DUF3010 family protein	NA	NA	NA	NA
WP_159937574.1\|6089533_6090712_-	hypothetical protein	NA	NA	NA	NA
WP_159937575.1\|6091415_6094148_+	hypothetical protein	NA	NA	NA	NA
WP_174244846.1\|6094190_6095156_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_159937577.1\|6095349_6096294_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_159937578.1\|6096381_6097269_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_159937579.1\|6097352_6098318_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_159937580.1\|6098331_6098808_+	thioesterase family protein	NA	NA	NA	NA
WP_010207120.1\|6099063_6099327_+	hypothetical protein	NA	NA	NA	NA
WP_099585767.1\|6099370_6100474_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_159937581.1\|6100925_6102302_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_159937582.1\|6102717_6103665_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010207125.1\|6103734_6104580_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_159937583.1\|6104576_6105755_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.2e-26	37.3
WP_159937584.1\|6105872_6107864_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	27.4
WP_032884029.1\|6108187_6108781_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_159937585.1\|6108891_6110364_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_159937586.1\|6110526_6112221_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	1.7e-50	30.3

DBSCAN-SWA_9

6163328 : 6173294

Mannheimia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159937631.1\|6163328_6163607_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A0M3LQB1	Mannheimia_phage	1.0e-13	38.0
WP_159937632.1\|6163621_6163909_+	HigA family addiction module antidote protein	A0A0M3LPV0	Mannheimia_phage	4.9e-19	52.9
WP_110620277.1\|6163981_6164437_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_159937633.1\|6164429_6170249_-	Hpt domain-containing protein	W8CYM9	Bacillus_phage	6.3e-12	35.9
WP_159937634.1\|6170355_6172395_-	type IV pili methyl-accepting chemotaxis transducer N-terminal domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.2e-18	40.5
WP_159937635.1\|6172391_6172916_-	chemotaxis protein CheW	Q56AR1	Bacillus_thuringiensis_phage	6.7e-06	33.3
WP_003234583.1\|6172928_6173294_-	twitching motility response regulator PilH	W8CYM9	Bacillus_phage	1.1e-12	33.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019431

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection