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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP029566 Clostridioides difficile strain CBA7204 chromosome, complete genome 20 crisprs DEDDh,cas14j,DinG,WYL,csa3,cas14k,cas3,cas5,cas7,cas6,cas2,cas1,cas4,cas8b2 0 70 5 0

Results visualization

1. NZ_CP029566
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_1 472085-473762 Orphan I-A
25 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_2 685619-686569 Orphan I-A
14 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_3 796830-797391 TypeV I-A
8 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_4 858028-858115 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_5 886530-887567 Orphan I-A
15 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_6 889154-889509 Orphan I-A
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_7 1029624-1029913 TypeV I-A
4 spacers
cas14j

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_8 1394185-1394929 Orphan I-A
11 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_9 1689478-1690556 Orphan I-A
16 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_10 1855241-1855398 Unclear NA
2 spacers
cas3,cas5,cas7,cas6

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_11 1936692-1936918 Orphan NA:I-A
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_12 2162291-2162616 Orphan NA
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_15 2217956-2218046 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_14 2217464-2217753 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_13 2217050-2217357 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_16 2433096-2433189 Unclear I-A
1 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_17 2433224-2435479 Unclear I-A
34 spacers
cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_18 3392351-3392429 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_19 3814257-3814361 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP029566_20 3964865-3964973 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP029566_1 1.20|473364|37|NZ_CP029566|PILER-CR 473364-473400 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 44640-44676 0 1.0
NZ_CP029566_1 1.20|473364|37|NZ_CP029566|PILER-CR 473364-473400 37 NC_007917 Clostridium phage phi CD119, complete genome 44640-44676 0 1.0
NZ_CP029566_1 1.30|472379|37|NZ_CP029566|CRISPRCasFinder,CRT 472379-472415 37 GU949551 Clostridium phage phiCD6356, complete genome 15115-15151 0 1.0
NZ_CP029566_1 1.31|472445|36|NZ_CP029566|CRISPRCasFinder,CRT 472445-472480 36 GU949551 Clostridium phage phiCD6356, complete genome 16261-16296 0 1.0
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 40358-40394 0 1.0
NZ_CP029566_1 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT 473168-473204 37 NZ_MG019959 Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence 2030-2066 0 1.0
NZ_CP029566_1 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT 473168-473204 37 NZ_MG019961 Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence 2034-2070 0 1.0
NZ_CP029566_1 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT 473168-473204 37 NZ_MG019962 Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence 2030-2066 0 1.0
NZ_CP029566_1 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT 473168-473204 37 NZ_MG019960 Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence 2030-2066 0 1.0
NZ_CP029566_1 1.45|473365|36|NZ_CP029566|CRISPRCasFinder,CRT 473365-473400 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 44640-44675 0 1.0
NZ_CP029566_1 1.45|473365|36|NZ_CP029566|CRISPRCasFinder,CRT 473365-473400 36 NC_007917 Clostridium phage phi CD119, complete genome 44640-44675 0 1.0
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 20899-20935 0 1.0
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 NC_007917 Clostridium phage phi CD119, complete genome 20899-20935 0 1.0
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 NC_028996 Clostridium phage phiCDHM19, complete genome 21152-21188 0 1.0
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 NC_028838 Clostridium phage phiCD506, complete genome 14483-14519 0 1.0
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 LN681538 Clostridium phage phiCD481-1, complete genome 14510-14546 0 1.0
NZ_CP029566_2 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685714-685751 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 7235-7272 0 1.0
NZ_CP029566_2 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685714-685751 38 NC_007917 Clostridium phage phi CD119, complete genome 7235-7272 0 1.0
NZ_CP029566_2 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685714-685751 38 NC_028996 Clostridium phage phiCDHM19, complete genome 7483-7520 0 1.0
NZ_CP029566_5 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 887172-887207 36 LN681542 Clostridium phage phiMMP03, complete genome 16151-16186 0 1.0
NZ_CP029566_5 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 887172-887207 36 NC_009231 Clostridium phage phiC2, complete genome 16182-16217 0 1.0
NZ_CP029566_5 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 887172-887207 36 LN681541 Clostridium phage phiMMP01, complete genome 16151-16186 0 1.0
NZ_CP029566_5 5.11|887237|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 887237-887274 38 MF547662 Clostridioides phage LIBA6276, complete genome 73668-73705 0 1.0
NZ_CP029566_7 7.2|1029718|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029718-1029753 36 FN668942 Clostridium difficile BI1 plasmid pCDBI1, complete sequence 3429-3464 0 1.0
NZ_CP029566_7 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029848-1029884 37 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 33648-33684 0 1.0
NZ_CP029566_8 8.5|1394470|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394470-1394506 37 JX145342 Clostridium phage phiMMP04, complete genome 2779-2815 0 1.0
NZ_CP029566_8 8.8|1394667|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394667-1394703 37 NC_028838 Clostridium phage phiCD506, complete genome 16436-16472 0 1.0
NZ_CP029566_9 9.6|1689833|35|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1689833-1689867 35 NC_028958 Clostridium phage phiCD146, complete genome 8060-8094 0 1.0
NZ_CP029566_17 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433642-2433677 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 32371-32406 0 1.0
NZ_CP029566_17 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433642-2433677 36 NC_007917 Clostridium phage phi CD119, complete genome 32371-32406 0 1.0
NZ_CP029566_17 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433642-2433677 36 NC_028996 Clostridium phage phiCDHM19, complete genome 36059-36094 0 1.0
NZ_CP029566_17 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433642-2433677 36 HG531805 Clostridium phage CDMH1 complete genome 34512-34547 0 1.0
NZ_CP029566_17 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433707-2433742 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 31078-31113 0 1.0
NZ_CP029566_17 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433707-2433742 36 NC_007917 Clostridium phage phi CD119, complete genome 31078-31113 0 1.0
NZ_CP029566_17 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433707-2433742 36 NC_028996 Clostridium phage phiCDHM19, complete genome 34763-34798 0 1.0
NZ_CP029566_17 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433772-2433808 37 NC_028958 Clostridium phage phiCD146, complete genome 15478-15514 0 1.0
NZ_CP029566_17 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433838-2433873 36 KU057941 Clostridium phage CDSH1, complete genome 15248-15283 0 1.0
NZ_CP029566_17 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433838-2433873 36 LN881738 Escherichia phage slur17, complete genome 5154-5189 0 1.0
NZ_CP029566_17 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433838-2433873 36 HM568888 Clostridium phage phiCD38-2, complete genome 14744-14779 0 1.0
NZ_CP029566_17 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433838-2433873 36 NC_028958 Clostridium phage phiCD146, complete genome 14753-14788 0 1.0
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 JX145342 Clostridium phage phiMMP04, complete genome 21394-21429 0 1.0
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NC_028958 Clostridium phage phiCD146, complete genome 29386-29421 0 1.0
NZ_CP029566_17 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434033-2434069 37 HM568888 Clostridium phage phiCD38-2, complete genome 8390-8426 0 1.0
NZ_CP029566_17 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434033-2434069 37 NC_028958 Clostridium phage phiCD146, complete genome 8402-8438 0 1.0
NZ_CP029566_17 17.15|2434165|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434165-2434201 37 GU949551 Clostridium phage phiCD6356, complete genome 15396-15432 0 1.0
NZ_CP029566_17 17.19|2434428|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434428-2434463 36 NC_028996 Clostridium phage phiCDHM19, complete genome 38668-38703 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 LN881738 Escherichia phage slur17, complete genome 32094-32130 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 KU057941 Clostridium phage CDSH1, complete genome 29926-29962 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 GU949551 Clostridium phage phiCD6356, complete genome 25127-25163 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 NC_028905 Clostridium phage phiCD111, complete genome 29722-29758 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 NC_028838 Clostridium phage phiCD506, complete genome 23348-23384 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 HM568888 Clostridium phage phiCD38-2, complete genome 29420-29456 0 1.0
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 NC_028958 Clostridium phage phiCD146, complete genome 28984-29020 0 1.0
NZ_CP029566_17 17.32|2435285|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2435285-2435321 37 NC_005326 [Clostridium] difficile plasmid pCD6, complete sequence 861-897 0 1.0
NZ_CP029566_18 18.1|3392376|29|NZ_CP029566|CRISPRCasFinder 3392376-3392404 29 NZ_CP033215 Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence 5105-5133 0 1.0
NZ_CP029566_1 1.5|472378|38|NZ_CP029566|PILER-CR 472378-472415 38 GU949551 Clostridium phage phiCD6356, complete genome 15115-15152 1 0.974
NZ_CP029566_1 1.6|472444|37|NZ_CP029566|PILER-CR 472444-472480 37 GU949551 Clostridium phage phiCD6356, complete genome 16261-16297 1 0.973
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 40357-40394 1 0.974
NZ_CP029566_1 1.17|473167|38|NZ_CP029566|PILER-CR 473167-473204 38 NZ_MG019959 Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence 2029-2066 1 0.974
NZ_CP029566_1 1.17|473167|38|NZ_CP029566|PILER-CR 473167-473204 38 NZ_MG019961 Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence 2033-2070 1 0.974
NZ_CP029566_1 1.17|473167|38|NZ_CP029566|PILER-CR 473167-473204 38 NZ_MG019962 Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence 2029-2066 1 0.974
NZ_CP029566_1 1.17|473167|38|NZ_CP029566|PILER-CR 473167-473204 38 NZ_MG019960 Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence 2029-2066 1 0.974
NZ_CP029566_1 1.33|472576|37|NZ_CP029566|CRISPRCasFinder,CRT 472576-472612 37 NC_048642 Clostridium phage CDKM9, complete genome 41013-41049 1 0.973
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 NC_048665 Clostridium phage phiCDHM14, complete genome 14057-14093 1 0.973
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 HG796225 Clostridium phage phiCDHM13 complete genome 14025-14061 1 0.973
NZ_CP029566_2 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685648-685684 37 HG798901 Clostridium phage phiCDHM11 complete genome 14024-14060 1 0.973
NZ_CP029566_2 2.11|686306|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 686306-686341 36 JX145341 Clostridium phage phiMMP02, complete genome 19735-19770 1 0.972
NZ_CP029566_3 3.4|797059|37|NZ_CP029566|CRISPRCasFinder,CRT 797059-797095 37 NC_011398 Clostridium phage phiCD27, complete genome 22144-22180 1 0.973
NZ_CP029566_3 3.5|797125|38|NZ_CP029566|CRISPRCasFinder,CRT 797125-797162 38 GU949551 Clostridium phage phiCD6356, complete genome 14522-14559 1 0.974
NZ_CP029566_5 5.4|886758|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 886758-886793 36 GU949551 Clostridium phage phiCD6356, complete genome 8120-8155 1 0.972
NZ_CP029566_5 5.11|887237|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 887237-887274 38 MF547663 Clostridioides phage LIBA2945, complete genome 72391-72428 1 0.974
NZ_CP029566_7 7.2|1029718|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029718-1029753 36 KX905163 Clostridioides phage phiSemix9P1, complete genome 6526-6561 1 0.972
NZ_CP029566_8 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394536-1394571 36 KU057941 Clostridium phage CDSH1, complete genome 16074-16109 1 0.972
NZ_CP029566_8 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394536-1394571 36 HM568888 Clostridium phage phiCD38-2, complete genome 15570-15605 1 0.972
NZ_CP029566_8 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394536-1394571 36 LN881738 Escherichia phage slur17, complete genome 4328-4363 1 0.972
NZ_CP029566_8 8.7|1394601|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394601-1394637 37 GU949551 Clostridium phage phiCD6356, complete genome 13408-13444 1 0.973
NZ_CP029566_9 9.5|1689768|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1689768-1689803 36 GU949551 Clostridium phage phiCD6356, complete genome 9828-9863 1 0.972
NZ_CP029566_9 9.6|1689833|35|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1689833-1689867 35 HM568888 Clostridium phage phiCD38-2, complete genome 8048-8082 1 0.971
NZ_CP029566_11 11.2|1936788|36|NZ_CP029566|CRT 1936788-1936823 36 LN881738 Escherichia phage slur17, complete genome 25496-25531 1 0.972
NZ_CP029566_11 11.2|1936788|36|NZ_CP029566|CRT 1936788-1936823 36 KU057941 Clostridium phage CDSH1, complete genome 36525-36560 1 0.972
NZ_CP029566_11 11.2|1936788|36|NZ_CP029566|CRT 1936788-1936823 36 NC_028905 Clostridium phage phiCD111, complete genome 36089-36124 1 0.972
NZ_CP029566_11 11.2|1936788|36|NZ_CP029566|CRT 1936788-1936823 36 HM568888 Clostridium phage phiCD38-2, complete genome 36023-36058 1 0.972
NZ_CP029566_17 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433383-2433418 36 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 3026-3061 1 0.972
NZ_CP029566_17 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433383-2433418 36 NC_007917 Clostridium phage phi CD119, complete genome 3026-3061 1 0.972
NZ_CP029566_17 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433383-2433418 36 NC_028996 Clostridium phage phiCDHM19, complete genome 3273-3308 1 0.972
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 KU057941 Clostridium phage CDSH1, complete genome 30327-30362 1 0.972
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 LN881738 Escherichia phage slur17, complete genome 31694-31729 1 0.972
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 GU949551 Clostridium phage phiCD6356, complete genome 25528-25563 1 0.972
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 HM568888 Clostridium phage phiCD38-2, complete genome 29821-29856 1 0.972
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 MK473382 Clostridium phage JD032, complete genome 10901-10937 1 0.973
NZ_CP029566_1 1.8|472575|38|NZ_CP029566|PILER-CR 472575-472612 38 NC_048642 Clostridium phage CDKM9, complete genome 41012-41049 2 0.947
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 3864-3900 2 0.946
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 MF547662 Clostridioides phage LIBA6276, complete genome 120519-120555 2 0.946
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 118100-118136 2 0.946
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 LN681537 Clostridium phage phiCD211, complete genome 126962-126998 2 0.946
NZ_CP029566_1 1.50|473694|40|NZ_CP029566|CRISPRCasFinder,CRT 473694-473733 40 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 66090-66129 2 0.95
NZ_CP029566_3 3.2|796925|38|NZ_CP029566|CRISPRCasFinder,CRT 796925-796962 38 NC_028996 Clostridium phage phiCDHM19, complete genome 47604-47641 2 0.947
NZ_CP029566_3 3.2|796925|38|NZ_CP029566|CRISPRCasFinder,CRT 796925-796962 38 HG531805 Clostridium phage CDMH1 complete genome 47926-47963 2 0.947
NZ_CP029566_3 3.7|797259|37|NZ_CP029566|CRISPRCasFinder,CRT 797259-797295 37 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 102058-102094 2 0.946
NZ_CP029566_5 5.7|886978|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 886978-887013 36 NZ_CP029155 Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence 15085-15120 2 0.944
NZ_CP029566_5 5.7|886978|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 886978-887013 36 MF547662 Clostridioides phage LIBA6276, complete genome 72417-72452 2 0.944
NZ_CP029566_5 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT 887501-887538 38 MK473382 Clostridium phage JD032, complete genome 21324-21361 2 0.947
NZ_CP029566_5 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT 887501-887538 38 NC_048665 Clostridium phage phiCDHM14, complete genome 13351-13388 2 0.947
NZ_CP029566_5 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT 887501-887538 38 HG796225 Clostridium phage phiCDHM13 complete genome 13319-13356 2 0.947
NZ_CP029566_5 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT 887501-887538 38 HG798901 Clostridium phage phiCDHM11 complete genome 13318-13355 2 0.947
NZ_CP029566_8 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394536-1394571 36 NC_028958 Clostridium phage phiCD146, complete genome 15579-15614 2 0.944
NZ_CP029566_9 9.1|1689507|36|NZ_CP029566|CRISPRCasFinder,CRT 1689507-1689542 36 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 22132-22167 2 0.944
NZ_CP029566_11 11.2|1936788|36|NZ_CP029566|CRT 1936788-1936823 36 NC_028958 Clostridium phage phiCD146, complete genome 35538-35573 2 0.944
NZ_CP029566_17 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433772-2433808 37 LN881738 Escherichia phage slur17, complete genome 4428-4464 2 0.946
NZ_CP029566_17 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433772-2433808 37 KU057941 Clostridium phage CDSH1, complete genome 15973-16009 2 0.946
NZ_CP029566_17 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433772-2433808 37 HM568888 Clostridium phage phiCD38-2, complete genome 15469-15505 2 0.946
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK473382 Clostridium phage JD032, complete genome 10503-10538 2 0.944
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NC_028905 Clostridium phage phiCD111, complete genome 30122-30157 2 0.944
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NC_028838 Clostridium phage phiCD506, complete genome 23749-23784 2 0.944
NZ_CP029566_17 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434033-2434069 37 NC_028905 Clostridium phage phiCD111, complete genome 8732-8768 2 0.946
NZ_CP029566_17 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434757-2434793 37 JX145342 Clostridium phage phiMMP04, complete genome 20993-21029 2 0.946
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 NZ_CP020426 Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence 3864-3901 3 0.921
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 MF547662 Clostridioides phage LIBA6276, complete genome 120518-120555 3 0.921
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 CP011970 Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence 118099-118136 3 0.921
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 LN681537 Clostridium phage phiCD211, complete genome 126961-126998 3 0.921
NZ_CP029566_1 1.25|473693|41|NZ_CP029566|PILER-CR 473693-473733 41 NZ_MF547664 Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence 66090-66130 3 0.927
NZ_CP029566_3 3.8|797325|38|NZ_CP029566|CRISPRCasFinder,CRT 797325-797362 38 NZ_MG973074 Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence 94861-94898 3 0.921
NZ_CP029566_5 5.5|886823|38|NZ_CP029566|CRISPRCasFinder,CRT 886823-886860 38 JX145341 Clostridium phage phiMMP02, complete genome 20328-20365 3 0.921
NZ_CP029566_5 5.5|886823|38|NZ_CP029566|CRISPRCasFinder,CRT 886823-886860 38 NC_011398 Clostridium phage phiCD27, complete genome 20443-20480 3 0.921
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP014419 Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence 14288-14316 3 0.897
NZ_CP029566_11 11.5|1936786|39|NZ_CP029566|PILER-CR 1936786-1936824 39 KU057941 Clostridium phage CDSH1, complete genome 36523-36561 3 0.923
NZ_CP029566_11 11.5|1936786|39|NZ_CP029566|PILER-CR 1936786-1936824 39 LN881738 Escherichia phage slur17, complete genome 25495-25533 3 0.923
NZ_CP029566_11 11.5|1936786|39|NZ_CP029566|PILER-CR 1936786-1936824 39 NC_028905 Clostridium phage phiCD111, complete genome 36087-36125 3 0.923
NZ_CP029566_11 11.5|1936786|39|NZ_CP029566|PILER-CR 1936786-1936824 39 HM568888 Clostridium phage phiCD38-2, complete genome 36021-36059 3 0.923
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MN718463 Clostridium phage phiCDKH01, complete genome 5225-5260 3 0.917
NZ_CP029566_1 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT 472905-472941 37 MF547663 Clostridioides phage LIBA2945, complete genome 118782-118818 4 0.892
NZ_CP029566_1 1.41|473102|37|NZ_CP029566|CRISPRCasFinder,CRT 473102-473138 37 NZ_AP019719 Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence 4731-4767 4 0.892
NZ_CP029566_2 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685781-685817 37 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 7843-7879 4 0.892
NZ_CP029566_2 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685781-685817 37 NC_007917 Clostridium phage phi CD119, complete genome 7843-7879 4 0.892
NZ_CP029566_2 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 685781-685817 37 NC_028996 Clostridium phage phiCDHM19, complete genome 8091-8127 4 0.892
NZ_CP029566_11 11.5|1936786|39|NZ_CP029566|PILER-CR 1936786-1936824 39 NC_028958 Clostridium phage phiCD146, complete genome 35536-35574 4 0.897
NZ_CP029566_1 1.13|472904|38|NZ_CP029566|PILER-CR 472904-472941 38 MF547663 Clostridioides phage LIBA2945, complete genome 118781-118818 5 0.868
NZ_CP029566_1 1.16|473101|38|NZ_CP029566|PILER-CR 473101-473138 38 NZ_AP019719 Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence 4731-4768 5 0.868
NZ_CP029566_9 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1690229-1690266 38 AY855346 Clostridium difficile bacteriophage phi CD119, complete genome 9402-9439 6 0.842
NZ_CP029566_9 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1690229-1690266 38 NC_007917 Clostridium phage phi CD119, complete genome 9402-9439 6 0.842
NZ_CP029566_9 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1690229-1690266 38 NC_028996 Clostridium phage phiCDHM19, complete genome 9648-9685 6 0.842
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 LN681534 Clostridium phage phiCD24-1, complete genome 32147-32182 6 0.833
NZ_CP029566_18 18.1|3392376|29|NZ_CP029566|CRISPRCasFinder 3392376-3392404 29 KY971610 Pseudomonas phage PspYZU05, complete genome 134239-134267 6 0.793
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NC_011246 Borrelia recurrentis A1 plasmid pl124, complete sequence 62585-62613 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NC_011247 Borrelia duttonii Ly plasmid pl165, complete sequence 100909-100937 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP053971 Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence 12401-12429 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP028890 Borrelia turcica IST7 plasmid lp34, complete sequence 2065-2093 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP013278 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence 63046-63074 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NC_018509 Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence 56930-56958 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP039724 Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence 70260-70288 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP051859 Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence 169574-169602 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP009347 Bacillus thuringiensis HD1002 plasmid 3, complete sequence 208330-208358 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP045025 Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence 63046-63074 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP007182 Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence 32133-32161 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NC_014633 Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence 857478-857506 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP007752 Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence 38372-38400 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP017026 Campylobacter coli plasmid pCC14983A-1, complete sequence 111426-111454 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 NZ_CP017832 Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence 52593-52621 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 MN895437 Escherichia phage teqskov, complete genome 133993-134021 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 MN994497 Phage NBEco003, complete genome 117256-117284 7 0.759
NZ_CP029566_8 8.1|1394214|29|NZ_CP029566|CRT 1394214-1394242 29 KT184312 Enterobacteria phage Kha5h, complete genome 74684-74712 7 0.759
NZ_CP029566_17 17.25|2434823|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434823-2434859 37 JF974296 Pseudoalteromonas phage pYD6-A genomic sequence 33725-33761 7 0.811
NZ_CP029566_6 6.3|889313|39|NZ_CP029566|CRISPRCasFinder 889313-889351 39 LN681542 Clostridium phage phiMMP03, complete genome 13834-13872 8 0.795
NZ_CP029566_6 6.3|889313|39|NZ_CP029566|CRISPRCasFinder 889313-889351 39 HG531805 Clostridium phage CDMH1 complete genome 14974-15012 8 0.795
NZ_CP029566_6 6.3|889313|39|NZ_CP029566|CRISPRCasFinder 889313-889351 39 NC_009231 Clostridium phage phiC2, complete genome 13865-13903 8 0.795
NZ_CP029566_6 6.3|889313|39|NZ_CP029566|CRISPRCasFinder 889313-889351 39 LN681541 Clostridium phage phiMMP01, complete genome 13834-13872 8 0.795
NZ_CP029566_7 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029848-1029884 37 NZ_CP017256 Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence 5594-5630 8 0.784
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NZ_CP028257 Leuconostoc mesenteroides strain SRCM102735 plasmid unnamed2, complete sequence 28385-28420 8 0.778
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NZ_CP035749 Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed3, complete sequence 27856-27891 8 0.778
NZ_CP029566_17 17.21|2434559|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434559-2434595 37 NZ_CP034895 Buchnera aphidicola (Aphis helianthi) strain Ahe plasmid pLeu, complete sequence 7395-7431 8 0.784
NZ_CP029566_17 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2435351-2435385 35 NZ_CP012425 Spiroplasma kunkelii CR2-3x plasmid pSKU76, complete sequence 4363-4397 8 0.771
NZ_CP029566_17 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2435351-2435385 35 MH986725 Pseudoalteromonas phage DW, complete genome 33235-33269 8 0.771
NZ_CP029566_17 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2435351-2435385 35 NZ_CP026601 Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence 74258-74292 8 0.771
NZ_CP029566_1 1.32|472510|37|NZ_CP029566|CRISPRCasFinder,CRT 472510-472546 37 GU071097 Synechococcus phage S-SSM5, complete genome 21799-21835 9 0.757
NZ_CP029566_7 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029848-1029884 37 NZ_CP047434 Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6 24856-24892 9 0.757
NZ_CP029566_8 8.4|1394404|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR 1394404-1394440 37 CP009912 Borreliella chilensis strain VA1 plasmid lp54, complete sequence 30607-30643 9 0.757
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK721199 Enterococcus phage vB_EfaS_Ef5.1, complete genome 27364-27399 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK360024 Enterococcus phage vB_EfaS_Max, complete genome 29054-29089 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK721190 Enterococcus phage vB_EfaS_Ef6.4, complete genome 27136-27171 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 NC_042101 Enterococcus phage PMBT2, complete genome 28290-28325 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK721200 Enterococcus phage vB_EfaS_Ef5.3, complete genome 27656-27691 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK982307 Enterococcus phage MSF2, complete genome 33981-34016 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MH193369 Enterococcus phage LY0322, complete genome 11802-11837 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 MK721186 Enterococcus phage vB_EfaS_Ef5.2, complete genome 27848-27883 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 JX193904 Enterococcus phage EfaCPT1, complete genome 26091-26126 9 0.75
NZ_CP029566_17 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2433903-2433938 36 KJ127304 Enterococcus phage AUEF3, partial genome 18697-18732 9 0.75
NZ_CP029566_1 1.35|472708|37|NZ_CP029566|CRISPRCasFinder,CRT 472708-472744 37 NZ_CP045273 Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence 340439-340475 10 0.73
NZ_CP029566_5 5.14|887436|36|NZ_CP029566|CRISPRCasFinder,CRT 887436-887471 36 MN694265 Marine virus AFVG_250M803, complete genome 49772-49807 10 0.722
NZ_CP029566_5 5.17|887439|36|NZ_CP029566|PILER-CR 887439-887474 36 MN694265 Marine virus AFVG_250M803, complete genome 49772-49807 10 0.722
NZ_CP029566_7 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029848-1029884 37 NZ_CP035115 Lactobacillus plantarum strain SRCM103295 plasmid unnamed2 17114-17150 10 0.73
NZ_CP029566_7 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT 1029848-1029884 37 NZ_CP035567 Lactobacillus plantarum strain SRCM103300 plasmid unnamed1 50389-50425 10 0.73
NZ_CP029566_9 9.1|1689507|36|NZ_CP029566|CRISPRCasFinder,CRT 1689507-1689542 36 NZ_CP045274 Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence 47033-47068 10 0.722
NZ_CP029566_17 17.26|2434889|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434889-2434925 37 MN694667 Marine virus AFVG_250M114, complete genome 25858-25894 10 0.73
NZ_CP029566_17 17.26|2434889|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2434889-2434925 37 NC_019351 Lactococcus lactis subsp. cremoris plasmid pAF22, complete sequence 6007-6043 10 0.73
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024393 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence 14846-14881 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024208 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence 14884-14919 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024336 Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence 15031-15066 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024355 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence 14884-14919 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024320 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence 17319-17354 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024354 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence 28967-29002 11 0.694
NZ_CP029566_1 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT 472774-472809 36 NZ_CP024374 Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence 33150-33185 11 0.694
NZ_CP029566_5 5.12|887304|37|NZ_CP029566|CRISPRCasFinder,CRT 887304-887340 37 LC557520 Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome 15673-15709 11 0.703
NZ_CP029566_9 9.11|1690163|37|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR 1690163-1690199 37 NC_018878 Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence 269698-269734 11 0.703
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024393 Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence 14845-14881 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024208 Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence 14883-14919 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024336 Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence 15030-15066 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024355 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence 14883-14919 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024320 Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence 17319-17355 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024354 Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence 28967-29003 12 0.676
NZ_CP029566_1 1.11|472773|37|NZ_CP029566|PILER-CR 472773-472809 37 NZ_CP024374 Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence 33150-33186 12 0.676
NZ_CP029566_17 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder 2435351-2435385 35 CP041751 Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence 48662-48696 12 0.657

1. spacer 1.20|473364|37|NZ_CP029566|PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aatcgaattgaaatatttattagcaggagcaagtttt	CRISPR spacer
aatcgaattgaaatatttattagcaggagcaagtttt	Protospacer
*************************************

2. spacer 1.20|473364|37|NZ_CP029566|PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

aatcgaattgaaatatttattagcaggagcaagtttt	CRISPR spacer
aatcgaattgaaatatttattagcaggagcaagtttt	Protospacer
*************************************

3. spacer 1.30|472379|37|NZ_CP029566|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

catatcagcacttccaagatttttattttctgaaatg	CRISPR spacer
catatcagcacttccaagatttttattttctgaaatg	Protospacer
*************************************

4. spacer 1.31|472445|36|NZ_CP029566|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

agcgttcaattgcgcaagtaatgttgttgtgtctat	CRISPR spacer
agcgttcaattgcgcaagtaatgttgttgtgtctat	Protospacer
************************************

5. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tataatttattagcttgtttcaataattctaattgat	Protospacer
*************************************

6. spacer 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 0, identity: 1.0

tttagattttcacttatgtatttatctatattaatta	CRISPR spacer
tttagattttcacttatgtatttatctatattaatta	Protospacer
*************************************

7. spacer 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 0, identity: 1.0

tttagattttcacttatgtatttatctatattaatta	CRISPR spacer
tttagattttcacttatgtatttatctatattaatta	Protospacer
*************************************

8. spacer 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 0, identity: 1.0

tttagattttcacttatgtatttatctatattaatta	CRISPR spacer
tttagattttcacttatgtatttatctatattaatta	Protospacer
*************************************

9. spacer 1.42|473168|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 0, identity: 1.0

tttagattttcacttatgtatttatctatattaatta	CRISPR spacer
tttagattttcacttatgtatttatctatattaatta	Protospacer
*************************************

10. spacer 1.45|473365|36|NZ_CP029566|CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atcgaattgaaatatttattagcaggagcaagtttt	CRISPR spacer
atcgaattgaaatatttattagcaggagcaagtttt	Protospacer
************************************

11. spacer 1.45|473365|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

atcgaattgaaatatttattagcaggagcaagtttt	CRISPR spacer
atcgaattgaaatatttattagcaggagcaagtttt	Protospacer
************************************

12. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
gggacggtaaaggtattaatatttggagaaaataatc	Protospacer
*************************************

13. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
gggacggtaaaggtattaatatttggagaaaataatc	Protospacer
*************************************

14. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
gggacggtaaaggtattaatatttggagaaaataatc	Protospacer
*************************************

15. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
gggacggtaaaggtattaatatttggagaaaataatc	Protospacer
*************************************

16. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to LN681538 (Clostridium phage phiCD481-1, complete genome) position: , mismatch: 0, identity: 1.0

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
gggacggtaaaggtattaatatttggagaaaataatc	Protospacer
*************************************

17. spacer 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ttgaaattctcccatgacagtcgttgctgttactaaga	CRISPR spacer
ttgaaattctcccatgacagtcgttgctgttactaaga	Protospacer
**************************************

18. spacer 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

ttgaaattctcccatgacagtcgttgctgttactaaga	CRISPR spacer
ttgaaattctcccatgacagtcgttgctgttactaaga	Protospacer
**************************************

19. spacer 2.2|685714|38|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

ttgaaattctcccatgacagtcgttgctgttactaaga	CRISPR spacer
ttgaaattctcccatgacagtcgttgctgttactaaga	Protospacer
**************************************

20. spacer 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 0, identity: 1.0

ccagtcatgaaaccaaaagaatttagaccagattca	CRISPR spacer
ccagtcatgaaaccaaaagaatttagaccagattca	Protospacer
************************************

21. spacer 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 0, identity: 1.0

ccagtcatgaaaccaaaagaatttagaccagattca	CRISPR spacer
ccagtcatgaaaccaaaagaatttagaccagattca	Protospacer
************************************

22. spacer 5.10|887172|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 0, identity: 1.0

ccagtcatgaaaccaaaagaatttagaccagattca	CRISPR spacer
ccagtcatgaaaccaaaagaatttagaccagattca	Protospacer
************************************

23. spacer 5.11|887237|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 0, identity: 1.0

ttttcatcaagtatatttattgttaattggtctggaaa	CRISPR spacer
ttttcatcaagtatatttattgttaattggtctggaaa	Protospacer
**************************************

24. spacer 7.2|1029718|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to FN668942 (Clostridium difficile BI1 plasmid pCDBI1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttttaacttttcagttctcacaggcgtttcatct	CRISPR spacer
ttttttaacttttcagttctcacaggcgtttcatct	Protospacer
************************************

25. spacer 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 0, identity: 1.0

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
tcaatatctatattaagtttatttttaaaaacatctt	Protospacer
*************************************

26. spacer 8.5|1394470|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

tatctaatcgacgaacaggtttatcgccattttctat	CRISPR spacer
tatctaatcgacgaacaggtttatcgccattttctat	Protospacer
*************************************

27. spacer 8.8|1394667|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

gcaaagttaaatgaaaatagtagtttgaaagaaataa	CRISPR spacer
gcaaagttaaatgaaaatagtagtttgaaagaaataa	Protospacer
*************************************

28. spacer 9.6|1689833|35|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

cagtttatatttatatttgcaagtagagagtgtta	CRISPR spacer
cagtttatatttatatttgcaagtagagagtgtta	Protospacer
***********************************

29. spacer 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

caaaaaattataattaaaaagacgattaataataca	CRISPR spacer
caaaaaattataattaaaaagacgattaataataca	Protospacer
************************************

30. spacer 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

caaaaaattataattaaaaagacgattaataataca	CRISPR spacer
caaaaaattataattaaaaagacgattaataataca	Protospacer
************************************

31. spacer 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

caaaaaattataattaaaaagacgattaataataca	CRISPR spacer
caaaaaattataattaaaaagacgattaataataca	Protospacer
************************************

32. spacer 17.7|2433642|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 0, identity: 1.0

caaaaaattataattaaaaagacgattaataataca	CRISPR spacer
caaaaaattataattaaaaagacgattaataataca	Protospacer
************************************

33. spacer 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

tgatttagctatacctatttatttaatgttaacgct	CRISPR spacer
tgatttagctatacctatttatttaatgttaacgct	Protospacer
************************************

34. spacer 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 0, identity: 1.0

tgatttagctatacctatttatttaatgttaacgct	CRISPR spacer
tgatttagctatacctatttatttaatgttaacgct	Protospacer
************************************

35. spacer 17.8|2433707|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

tgatttagctatacctatttatttaatgttaacgct	CRISPR spacer
tgatttagctatacctatttatttaatgttaacgct	Protospacer
************************************

36. spacer 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

atgttataagttgggggactaacttagtcaaacaagc	CRISPR spacer
atgttataagttgggggactaacttagtcaaacaagc	Protospacer
*************************************

37. spacer 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

tattgtcgaatggtttaaacaaattccatataatat	CRISPR spacer
tattgtcgaatggtttaaacaaattccatataatat	Protospacer
************************************

38. spacer 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

tattgtcgaatggtttaaacaaattccatataatat	CRISPR spacer
tattgtcgaatggtttaaacaaattccatataatat	Protospacer
************************************

39. spacer 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tattgtcgaatggtttaaacaaattccatataatat	CRISPR spacer
tattgtcgaatggtttaaacaaattccatataatat	Protospacer
************************************

40. spacer 17.10|2433838|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tattgtcgaatggtttaaacaaattccatataatat	CRISPR spacer
tattgtcgaatggtttaaacaaattccatataatat	Protospacer
************************************

41. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 0, identity: 1.0

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattatatcatga	Protospacer
************************************

42. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattatatcatga	Protospacer
************************************

43. spacer 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

tcgtctaatgtattaaatcctgctcccattaataccc	CRISPR spacer
tcgtctaatgtattaaatcctgctcccattaataccc	Protospacer
*************************************

44. spacer 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

tcgtctaatgtattaaatcctgctcccattaataccc	CRISPR spacer
tcgtctaatgtattaaatcctgctcccattaataccc	Protospacer
*************************************

45. spacer 17.15|2434165|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

gagcaagagaggatgcaacaaagctagtaatttcagt	CRISPR spacer
gagcaagagaggatgcaacaaagctagtaatttcagt	Protospacer
*************************************

46. spacer 17.19|2434428|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 0, identity: 1.0

tttagaaactgtggaaggtactagagagacatcaac	CRISPR spacer
tttagaaactgtggaaggtactagagagacatcaac	Protospacer
************************************

47. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

48. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

49. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

50. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

51. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

52. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

53. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 0, identity: 1.0

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
*************************************

54. spacer 17.32|2435285|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_005326 ([Clostridium] difficile plasmid pCD6, complete sequence) position: , mismatch: 0, identity: 1.0

tagtgtatgtaaaatttagaatagtgtatgtaatttt	CRISPR spacer
tagtgtatgtaaaatttagaatagtgtatgtaatttt	Protospacer
*************************************

55. spacer 18.1|3392376|29|NZ_CP029566|CRISPRCasFinder matches to NZ_CP033215 (Clostridioides difficile strain 12038 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tgtaataagttaaagcaatatgaatcaac	Protospacer
*****************************

56. spacer 1.5|472378|38|NZ_CP029566|PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

gcatatcagcacttccaagatttttattttctgaaatg	CRISPR spacer
acatatcagcacttccaagatttttattttctgaaatg	Protospacer
.*************************************

57. spacer 1.6|472444|37|NZ_CP029566|PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

gagcgttcaattgcgcaagtaatgttgttgtgtctat	CRISPR spacer
aagcgttcaattgcgcaagtaatgttgttgtgtctat	Protospacer
.************************************

58. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.974

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ttataatttattagcttgtttcaataattctaattgat	Protospacer
 *************************************

59. spacer 1.17|473167|38|NZ_CP029566|PILER-CR matches to NZ_MG019959 (Clostridioides difficile isolate ERR017368_NODE12 plasmid pCD-WTSI1, complete sequence) position: , mismatch: 1, identity: 0.974

gtttagattttcacttatgtatttatctatattaatta	CRISPR spacer
ttttagattttcacttatgtatttatctatattaatta	Protospacer
 *************************************

60. spacer 1.17|473167|38|NZ_CP029566|PILER-CR matches to NZ_MG019961 (Clostridioides difficile isolate ERR125910_NODE5 plasmid pCD-WTSI3, complete sequence) position: , mismatch: 1, identity: 0.974

gtttagattttcacttatgtatttatctatattaatta	CRISPR spacer
ttttagattttcacttatgtatttatctatattaatta	Protospacer
 *************************************

61. spacer 1.17|473167|38|NZ_CP029566|PILER-CR matches to NZ_MG019962 (Clostridioides difficile isolate ERR125911_NODE11 plasmid pCD-WTSI4, complete sequence) position: , mismatch: 1, identity: 0.974

gtttagattttcacttatgtatttatctatattaatta	CRISPR spacer
ttttagattttcacttatgtatttatctatattaatta	Protospacer
 *************************************

62. spacer 1.17|473167|38|NZ_CP029566|PILER-CR matches to NZ_MG019960 (Clostridioides difficile isolate ERR022513_NODE32 plasmid pCD-WTSI2, complete sequence) position: , mismatch: 1, identity: 0.974

gtttagattttcacttatgtatttatctatattaatta	CRISPR spacer
ttttagattttcacttatgtatttatctatattaatta	Protospacer
 *************************************

63. spacer 1.33|472576|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 1, identity: 0.973

tcacaaaaacaaggaatacttaaattagcatcaatga	CRISPR spacer
tcacaaaaacaaggaatacttaagttagcatcaatga	Protospacer
***********************.*************

64. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 1, identity: 0.973

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
ggaacggtaaaggtattaatatttggagaaaataatc	Protospacer
**.**********************************

65. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 1, identity: 0.973

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
ggaacggtaaaggtattaatatttggagaaaataatc	Protospacer
**.**********************************

66. spacer 2.1|685648|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 1, identity: 0.973

gggacggtaaaggtattaatatttggagaaaataatc	CRISPR spacer
ggaacggtaaaggtattaatatttggagaaaataatc	Protospacer
**.**********************************

67. spacer 2.11|686306|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 1, identity: 0.972

attaaaactaaactctcctacttcttttgtgtaagg	CRISPR spacer
attaaagctaaactctcctacttcttttgtgtaagg	Protospacer
******.*****************************

68. spacer 3.4|797059|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 1, identity: 0.973

tcagaatctattaaacctatttcatttatattttttc	CRISPR spacer
tccgaatctattaaacctatttcatttatattttttc	Protospacer
** **********************************

69. spacer 3.5|797125|38|NZ_CP029566|CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.974

attaaaaacatttattctttcatagtttgattttacta	CRISPR spacer
attgaaaacatttattctttcatagtttgattttacta	Protospacer
***.**********************************

70. spacer 5.4|886758|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

cgtgattttataaaagatttatatagtatgttttta	CRISPR spacer
cgtgattttataaaagatttatatagcatgttttta	Protospacer
**************************.*********

71. spacer 5.11|887237|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 1, identity: 0.974

ttttcatcaagtatatttattgttaattggtctggaaa	CRISPR spacer
ttttcatcaagtatatttattgttagttggtctggaaa	Protospacer
*************************.************

72. spacer 7.2|1029718|36|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 1, identity: 0.972

ttttttaacttttcagttctcacaggcgtttcatct	CRISPR spacer
ttttttaacttttcagttctcacaggtgtttcatct	Protospacer
**************************.*********

73. spacer 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.972

attatgagtatcgggaaagatgttgtgagaggctta	CRISPR spacer
attatgagtatcgggaaagatgttgtaagaggctta	Protospacer
**************************.*********

74. spacer 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.972

attatgagtatcgggaaagatgttgtgagaggctta	CRISPR spacer
attatgagtatcgggaaagatgttgtaagaggctta	Protospacer
**************************.*********

75. spacer 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.972

attatgagtatcgggaaagatgttgtgagaggctta	CRISPR spacer
attatgagtatcgggaaagatgttgtaagaggctta	Protospacer
**************************.*********

76. spacer 8.7|1394601|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.973

gagtctaaattacaagcagaagcggaaaaaatgataa	CRISPR spacer
gagtctaaattacaagcagaagcagaaaaaatgataa	Protospacer
***********************.*************

77. spacer 9.5|1689768|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

tatgaaagaactaggattaagtgcttttgattctaa	CRISPR spacer
tatgaaagaactaggattaagtgcttttgattccaa	Protospacer
*********************************.**

78. spacer 9.6|1689833|35|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.971

cagtttatatttatatttgcaagtagagagtgtta	CRISPR spacer
cagtttatatttatatttgcaagtagggagtgtta	Protospacer
**************************.********

79. spacer 11.2|1936788|36|NZ_CP029566|CRT matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.972

aagttggagcaagaaaaatagaaacaagagaaatta	CRISPR spacer
aagttggagcaagaaaaatagaaacaagagaaatca	Protospacer
**********************************.*

80. spacer 11.2|1936788|36|NZ_CP029566|CRT matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.972

aagttggagcaagaaaaatagaaacaagagaaatta	CRISPR spacer
aagttggagcaagaaaaatagaaacaagagaaatca	Protospacer
**********************************.*

81. spacer 11.2|1936788|36|NZ_CP029566|CRT matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 1, identity: 0.972

aagttggagcaagaaaaatagaaacaagagaaatta	CRISPR spacer
aagttggagcaagaaaaatagaaacaagagaaataa	Protospacer
********************************** *

82. spacer 11.2|1936788|36|NZ_CP029566|CRT matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.972

aagttggagcaagaaaaatagaaacaagagaaatta	CRISPR spacer
aagttggagcaagaaaaatagaaacaagagaaatca	Protospacer
**********************************.*

83. spacer 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

agtgaatacagaagaaattattcctatatatcgaaa	CRISPR spacer
agtcaatacagaagaaattattcctatatatcgaaa	Protospacer
*** ********************************

84. spacer 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 1, identity: 0.972

agtgaatacagaagaaattattcctatatatcgaaa	CRISPR spacer
agtcaatacagaagaaattattcctatatatcgaaa	Protospacer
*** ********************************

85. spacer 17.3|2433383|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 1, identity: 0.972

agtgaatacagaagaaattattcctatatatcgaaa	CRISPR spacer
agtcaatacagaagaaattattcctatatatcgaaa	Protospacer
*** ********************************

86. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 1, identity: 0.972

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattataccatga	Protospacer
******************************.*****

87. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 1, identity: 0.972

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattataccatga	Protospacer
******************************.*****

88. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to GU949551 (Clostridium phage phiCD6356, complete genome) position: , mismatch: 1, identity: 0.972

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattataccatga	Protospacer
******************************.*****

89. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 1, identity: 0.972

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattataccatga	Protospacer
******************************.*****

90. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 1, identity: 0.973

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
tttttctttgtaatacagcaaaaaaggagctaatgaa	Protospacer
.************************************

91. spacer 1.8|472575|38|NZ_CP029566|PILER-CR matches to NC_048642 (Clostridium phage CDKM9, complete genome) position: , mismatch: 2, identity: 0.947

gtcacaaaaacaaggaatacttaaattagcatcaatga	CRISPR spacer
atcacaaaaacaaggaatacttaagttagcatcaatga	Protospacer
.***********************.*************

92. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.946

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tataatttattagattgtttcaataattttaattgat	Protospacer
************* **************.********

93. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.946

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tataatttattagcctgttccaataattctaattgat	Protospacer
**************.****.*****************

94. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 2, identity: 0.946

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tataatttattagattgtttcaataattttaattgat	Protospacer
************* **************.********

95. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 2, identity: 0.946

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tataatttattagattgtttcaataattttaattgat	Protospacer
************* **************.********

96. spacer 1.50|473694|40|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 2, identity: 0.95

ccatattgggatatagtaaaattttcaggaaatgtatatg	CRISPR spacer
ccatattgggatataataaaatattcaggaaatgtatatg	Protospacer
***************.****** *****************

97. spacer 3.2|796925|38|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 2, identity: 0.947

gtaactttaatcaatacttttttaacttgaacaatttc	CRISPR spacer
gtaactttaatcaatgcttttttaacttgagcaatttc	Protospacer
***************.**************.*******

98. spacer 3.2|796925|38|NZ_CP029566|CRISPRCasFinder,CRT matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 2, identity: 0.947

gtaactttaatcaatacttttttaacttgaacaatttc	CRISPR spacer
gtaactttaatcaatgcttttttaacttgagcaatttc	Protospacer
***************.**************.*******

99. spacer 3.7|797259|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.946

agcaattctgatatttttattctaatcatttgaaatc	CRISPR spacer
agcaattctgatatttttattctgatcatttaaaatc	Protospacer
***********************.*******.*****

100. spacer 5.7|886978|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.944

taactaaatgttcttgcagtgtcactacatgtttga	CRISPR spacer
taactaaatgttcttgcagtatcactacatgtttgg	Protospacer
********************.**************.

101. spacer 5.7|886978|36|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 2, identity: 0.944

taactaaatgttcttgcagtgtcactacatgtttga	CRISPR spacer
taactaaatgttcttgcagtatcactacatgtttgg	Protospacer
********************.**************.

102. spacer 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.947

taaattgttgaaatttctatatcgacgcttaataaatc	CRISPR spacer
taaattgttgaaatttctatatctacacttaataaatc	Protospacer
*********************** **.***********

103. spacer 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_048665 (Clostridium phage phiCDHM14, complete genome) position: , mismatch: 2, identity: 0.947

taaattgttgaaatttctatatcgacgcttaataaatc	CRISPR spacer
taaattgttgaaatttctatatctacacttaataaatc	Protospacer
*********************** **.***********

104. spacer 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT matches to HG796225 (Clostridium phage phiCDHM13 complete genome) position: , mismatch: 2, identity: 0.947

taaattgttgaaatttctatatcgacgcttaataaatc	CRISPR spacer
taaattgttgaaatttctatatctacacttaataaatc	Protospacer
*********************** **.***********

105. spacer 5.15|887501|38|NZ_CP029566|CRISPRCasFinder,CRT matches to HG798901 (Clostridium phage phiCDHM11 complete genome) position: , mismatch: 2, identity: 0.947

taaattgttgaaatttctatatcgacgcttaataaatc	CRISPR spacer
taaattgttgaaatttctatatctacacttaataaatc	Protospacer
*********************** **.***********

106. spacer 8.6|1394536|36|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

attatgagtatcgggaaagatgttgtgagaggctta	CRISPR spacer
attatgagtatcgggaaagatgttgtaagaggcttg	Protospacer
**************************.********.

107. spacer 9.1|1689507|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 2, identity: 0.944

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
acaattattaattgttttattaataaaatcacagca	Protospacer
**********************.*.***********

108. spacer 11.2|1936788|36|NZ_CP029566|CRT matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 2, identity: 0.944

aagttggagcaagaaaaatagaaacaagagaaatta	CRISPR spacer
aagttggagcaagaaaaatagaaacaaaagaagtta	Protospacer
***************************.****.***

109. spacer 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 2, identity: 0.946

atgttataagttgggggactaacttagtcaaacaagc	CRISPR spacer
atgtcataagctgggggactaacttagtcaaacaagc	Protospacer
****.*****.**************************

110. spacer 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 2, identity: 0.946

atgttataagttgggggactaacttagtcaaacaagc	CRISPR spacer
atgtcataagctgggggactaacttagtcaaacaagc	Protospacer
****.*****.**************************

111. spacer 17.9|2433772|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 2, identity: 0.946

atgttataagttgggggactaacttagtcaaacaagc	CRISPR spacer
atgtcataagctgggggactaacttagtcaaacaagc	Protospacer
****.*****.**************************

112. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK473382 (Clostridium phage JD032, complete genome) position: , mismatch: 2, identity: 0.944

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattacaccatga	Protospacer
****************************.*.*****

113. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.944

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattatactatga	Protospacer
******************************..****

114. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028838 (Clostridium phage phiCD506, complete genome) position: , mismatch: 2, identity: 0.944

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttctctataaatatattatactatga	Protospacer
******************************..****

115. spacer 17.13|2434033|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 2, identity: 0.946

tcgtctaatgtattaaatcctgctcccattaataccc	CRISPR spacer
tcgtctaatgtattaaatcctgctcccatcaattccc	Protospacer
*****************************.*** ***

116. spacer 17.24|2434757|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to JX145342 (Clostridium phage phiMMP04, complete genome) position: , mismatch: 2, identity: 0.946

cttttctttgtaatacagcaaaaaaggagctaatgaa	CRISPR spacer
cttttctttgtaatacagcaaaaaaggagttaacgaa	Protospacer
*****************************.***.***

117. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to NZ_CP020426 (Clostridioides difficile strain FDAARGOS_267 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.921

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ttataatttattagattgtttcaataattttaattgat	Protospacer
 ************* **************.********

118. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 3, identity: 0.921

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ttataatttattagcctgttccaataattctaattgat	Protospacer
 **************.****.*****************

119. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to CP011970 (Peptoclostridium phage phiCDIF1296T strain DSM 1296, complete sequence) position: , mismatch: 3, identity: 0.921

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ttataatttattagattgtttcaataattttaattgat	Protospacer
 ************* **************.********

120. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to LN681537 (Clostridium phage phiCD211, complete genome) position: , mismatch: 3, identity: 0.921

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ttataatttattagattgtttcaataattttaattgat	Protospacer
 ************* **************.********

121. spacer 1.25|473693|41|NZ_CP029566|PILER-CR matches to NZ_MF547664 (Clostridioides difficile strain LIBA-6289 plasmid LIBA6289, complete sequence) position: , mismatch: 3, identity: 0.927

gccatattgggatatagtaaaattttcaggaaatgtatatg	CRISPR spacer
tccatattgggatataataaaatattcaggaaatgtatatg	Protospacer
 ***************.****** *****************

122. spacer 3.8|797325|38|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_MG973074 (Clostridioides difficile strain HSJD-312 plasmid pHSJD-312, complete sequence) position: , mismatch: 3, identity: 0.921

ccatcttttgttgctttacataaatttatattacttat	CRISPR spacer
ccatcttttgttgctttgcatagatttatattacttac	Protospacer
*****************.****.**************.

123. spacer 5.5|886823|38|NZ_CP029566|CRISPRCasFinder,CRT matches to JX145341 (Clostridium phage phiMMP02, complete genome) position: , mismatch: 3, identity: 0.921

ttaatagaacctagtaaaacggctacactacctttaga	CRISPR spacer
ctaatagaacctagtaaaacggatatactacctttaga	Protospacer
.********************* **.************

124. spacer 5.5|886823|38|NZ_CP029566|CRISPRCasFinder,CRT matches to NC_011398 (Clostridium phage phiCD27, complete genome) position: , mismatch: 3, identity: 0.921

ttaatagaacctagtaaaacggctacactacctttaga	CRISPR spacer
ctaatagaacctagtaaaacggatatactacctttaga	Protospacer
.********************* **.************

125. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP014419 (Staphylococcus aureus strain USA300-SUR15 plasmid pUSA08-1-SUR15, complete sequence) position: , mismatch: 3, identity: 0.897

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aaatcaatctttatttaataacaaaaaac	Protospacer
.* ****************** *******

126. spacer 11.5|1936786|39|NZ_CP029566|PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 3, identity: 0.923

acaagttggagcaagaaaaatagaaacaagagaaattaa	CRISPR spacer
ggaagttggagcaagaaaaatagaaacaagagaaatcaa	Protospacer
. **********************************.**

127. spacer 11.5|1936786|39|NZ_CP029566|PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 3, identity: 0.923

acaagttggagcaagaaaaatagaaacaagagaaattaa	CRISPR spacer
ggaagttggagcaagaaaaatagaaacaagagaaatcaa	Protospacer
. **********************************.**

128. spacer 11.5|1936786|39|NZ_CP029566|PILER-CR matches to NC_028905 (Clostridium phage phiCD111, complete genome) position: , mismatch: 3, identity: 0.923

acaagttggagcaagaaaaatagaaacaagagaaattaa	CRISPR spacer
ggaagttggagcaagaaaaatagaaacaagagaaataaa	Protospacer
. ********************************** **

129. spacer 11.5|1936786|39|NZ_CP029566|PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 3, identity: 0.923

acaagttggagcaagaaaaatagaaacaagagaaattaa	CRISPR spacer
ggaagttggagcaagaaaaatagaaacaagagaaatcaa	Protospacer
. **********************************.**

130. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MN718463 (Clostridium phage phiCDKH01, complete genome) position: , mismatch: 3, identity: 0.917

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
tctcacctccttgtctataaatatattataacatta	Protospacer
************ ***************** *** *

131. spacer 1.38|472905|37|NZ_CP029566|CRISPRCasFinder,CRT matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 4, identity: 0.892

tataatttattagcttgtttcaataattctaattgat	CRISPR spacer
ccttatttattagcttgttccaataattctaattgat	Protospacer
. * ***************.*****************

132. spacer 1.41|473102|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_AP019719 (Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence) position: , mismatch: 4, identity: 0.892

cttatttctaatatatcaagatagaaagaaactatcg	CRISPR spacer
cttatttctaatatatcaagatagaaagaaaatttta	Protospacer
******************************* * *..

133. spacer 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 4, identity: 0.892

aagctgtaggtttagcatctttaaaattagcatatac	CRISPR spacer
aacccacaggtttagcatctttaaaattagcatatac	Protospacer
** *...******************************

134. spacer 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 4, identity: 0.892

aagctgtaggtttagcatctttaaaattagcatatac	CRISPR spacer
aacccacaggtttagcatctttaaaattagcatatac	Protospacer
** *...******************************

135. spacer 2.3|685781|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 4, identity: 0.892

aagctgtaggtttagcatctttaaaattagcatatac	CRISPR spacer
aacccacaggtttagcatctttaaaattagcatatac	Protospacer
** *...******************************

136. spacer 11.5|1936786|39|NZ_CP029566|PILER-CR matches to NC_028958 (Clostridium phage phiCD146, complete genome) position: , mismatch: 4, identity: 0.897

acaagttggagcaagaaaaatagaaacaagagaaattaa	CRISPR spacer
ggaagttggagcaagaaaaatagaaacaaaagaagttaa	Protospacer
. ***************************.****.****

137. spacer 1.13|472904|38|NZ_CP029566|PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 5, identity: 0.868

gtataatttattagcttgtttcaataattctaattgat	CRISPR spacer
tccttatttattagcttgttccaataattctaattgat	Protospacer
 . * ***************.*****************

138. spacer 1.16|473101|38|NZ_CP029566|PILER-CR matches to NZ_AP019719 (Clostridium butyricum strain NBRC 13949 plasmid pCBU3, complete sequence) position: , mismatch: 5, identity: 0.868

gcttatttctaatatatcaagatagaaagaaactatcg	CRISPR spacer
acttatttctaatatatcaagatagaaagaaaatttta	Protospacer
.******************************* * *..

139. spacer 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to AY855346 (Clostridium difficile bacteriophage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

140. spacer 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NC_007917 (Clostridium phage phi CD119, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

141. spacer 9.12|1690229|38|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NC_028996 (Clostridium phage phiCDHM19, complete genome) position: , mismatch: 6, identity: 0.842

tttatatcagtctttttagtcgctgtctgaatctcctc	CRISPR spacer
tttatgtcagtctttttagtcgctgtctgtgccacttc	Protospacer
*****.*********************** ..* *.**

142. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to LN681534 (Clostridium phage phiCD24-1, complete genome) position: , mismatch: 6, identity: 0.833

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
ttctacctccttgtctataaatatattataacatta	Protospacer
*...******** ***************** *** *

143. spacer 18.1|3392376|29|NZ_CP029566|CRISPRCasFinder matches to KY971610 (Pseudomonas phage PspYZU05, complete genome) position: , mismatch: 6, identity: 0.793

tgtaataagttaaagcaatatgaatcaac	CRISPR spacer
tacgataagttacagcaatacgaatcatc	Protospacer
*...******** *******.****** *

144. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NC_011246 (Borrelia recurrentis A1 plasmid pl124, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ttatcaatcttaatttcataagaaaaatt	Protospacer
   ******** **** ********** .

145. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NC_011247 (Borrelia duttonii Ly plasmid pl165, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ttatcaatcttaatttcataagaaaaatt	Protospacer
   ******** **** ********** .

146. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP053971 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

147. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP028890 (Borrelia turcica IST7 plasmid lp34, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ggtcttatctttatttaaaaagaaaaaaa	Protospacer
*.... ************ ********* 

148. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP013278 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-3-235K, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

149. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NC_018509 (Bacillus thuringiensis HD-789 plasmid pBTHD789-2, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

150. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP039724 (Bacillus thuringiensis strain BT-59 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

151. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP051859 (Bacillus thuringiensis serovar israelensis strain BGSC 4Q7rifR plasmid pBtic235, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

152. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP009347 (Bacillus thuringiensis HD1002 plasmid 3, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

153. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP045025 (Bacillus thuringiensis strain JW-1 plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
ccatcaatctttattaagtaagaaaaaga	Protospacer
   ************ *.*********. 

154. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP007182 (Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
tatttttactttatttaaaaagaaaaaac	Protospacer
 *.*.   ********** **********

155. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NC_014633 (Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aagataatctttattaaatcagaaaaaaa	Protospacer
.*  .********** *** ******** 

156. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP007752 (Campylobacter jejuni subsp. jejuni D42a plasmid pTet-D42a, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
tatttttactttatttaaaaagaaaaaac	Protospacer
 *.*.   ********** **********

157. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP017026 (Campylobacter coli plasmid pCC14983A-1, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
tatttttactttatttaaaaagaaaaaac	Protospacer
 *.*.   ********** **********

158. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to NZ_CP017832 (Butyrivibrio hungatei strain MB2003 plasmid pNP144, complete sequence) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aaagaaatctatatttaataagaagaaag	Protospacer
.*   ***** *************.*** 

159. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to MN895437 (Escherichia phage teqskov, complete genome) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aattaaatctttagttaataagaaaatga	Protospacer
.*.* ******** ************ . 

160. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to MN994497 (Phage NBEco003, complete genome) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aattaaatctttagttaataagaaaatga	Protospacer
.*.* ******** ************ . 

161. spacer 8.1|1394214|29|NZ_CP029566|CRT matches to KT184312 (Enterobacteria phage Kha5h, complete genome) position: , mismatch: 7, identity: 0.759

gactcaatctttatttaataagaaaaaac	CRISPR spacer
aattaaatctttagttaataagaaaatga	Protospacer
.*.* ******** ************ . 

162. spacer 17.25|2434823|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to JF974296 (Pseudoalteromonas phage pYD6-A genomic sequence) position: , mismatch: 7, identity: 0.811

aagccattaaggctataccttctaaagaggaactaaa--	CRISPR spacer
aagccatgaaggcaataccttctaaagcaaa--taaagc	Protospacer
******* ***** ************* ..*  ****  

163. spacer 6.3|889313|39|NZ_CP029566|CRISPRCasFinder matches to LN681542 (Clostridium phage phiMMP03, complete genome) position: , mismatch: 8, identity: 0.795

gattcgcgatactatttgtgcagtatctaagtaggatgg	CRISPR spacer
tatacgactcactatttgtgcagtatctaagtaagatgc	Protospacer
 ** **   .***********************.**** 

164. spacer 6.3|889313|39|NZ_CP029566|CRISPRCasFinder matches to HG531805 (Clostridium phage CDMH1 complete genome) position: , mismatch: 8, identity: 0.795

gattcgcgatactatttgtgcagtatctaagtaggatgg	CRISPR spacer
tatacgactcactatttgtgcagtatctaagtaagatgc	Protospacer
 ** **   .***********************.**** 

165. spacer 6.3|889313|39|NZ_CP029566|CRISPRCasFinder matches to NC_009231 (Clostridium phage phiC2, complete genome) position: , mismatch: 8, identity: 0.795

gattcgcgatactatttgtgcagtatctaagtaggatgg	CRISPR spacer
tatacgactcactatttgtgcagtatctaagtaagatgc	Protospacer
 ** **   .***********************.**** 

166. spacer 6.3|889313|39|NZ_CP029566|CRISPRCasFinder matches to LN681541 (Clostridium phage phiMMP01, complete genome) position: , mismatch: 8, identity: 0.795

gattcgcgatactatttgtgcagtatctaagtaggatgg	CRISPR spacer
tatacgactcactatttgtgcagtatctaagtaagatgc	Protospacer
 ** **   .***********************.**** 

167. spacer 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 8, identity: 0.784

tcaatatctatattaagtttatttttaaaaacatctt-----	CRISPR spacer
tcaatatttatattaactttattttta-----gtcttcattt	Protospacer
*******.******** **********     .****     

168. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP028257 (Leuconostoc mesenteroides strain SRCM102735 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.778

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
gtacgcctccttgtttataaatatattatatcatag	Protospacer
 . *.******* *.*******************..

169. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP035749 (Leuconostoc mesenteroides strain SRCM103460 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.778

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
gtacgcctccttgtttataaatatattatatcatag	Protospacer
 . *.******* *.*******************..

170. spacer 17.21|2434559|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034895 (Buchnera aphidicola (Aphis helianthi) strain Ahe plasmid pLeu, complete sequence) position: , mismatch: 8, identity: 0.784

agagtcaaaaatttaattactgttaaagatattcctc	CRISPR spacer
aaaattaaaaattttattactgctaaagatattattt	Protospacer
*.*.*.******** *******.********** .*.

171. spacer 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012425 (Spiroplasma kunkelii CR2-3x plasmid pSKU76, complete sequence) position: , mismatch: 8, identity: 0.771

gaagaaagtaaaaaaagtaaacctttaatatcaag	CRISPR spacer
cgaaaaagtaaaaaaagtaaactttttattaaaag	Protospacer
 .*.******************.*** **   ***

172. spacer 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MH986725 (Pseudoalteromonas phage DW, complete genome) position: , mismatch: 8, identity: 0.771

gaagaaagtaaaaaaagtaaacctttaatatcaag	CRISPR spacer
aaacaagcaaaaaaaaataatcctttaatatcaat	Protospacer
.** **.  *******.*** ************* 

173. spacer 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026601 (Clostridiaceae bacterium 14S0207 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.771

gaagaaagtaaaaaaagtaaacctttaatatcaag	CRISPR spacer
caagaaagtataaaaagtaaatctttgaaaagaat	Protospacer
 ********* **********.****.* *  ** 

174. spacer 1.32|472510|37|NZ_CP029566|CRISPRCasFinder,CRT matches to GU071097 (Synechococcus phage S-SSM5, complete genome) position: , mismatch: 9, identity: 0.757

taaaaaacaatgtcagtagtattagcaggtaaatcta	CRISPR spacer
gcaaaaacaatatcagtattattagcagtatcatcaa	Protospacer
  *********.****** *********    *** *

175. spacer 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047434 (Spiroplasma citri strain BLH-13 plasmid pSciBLH13-6) position: , mismatch: 9, identity: 0.757

tcaatatctatattaagtttatttttaa---aaacatctt	CRISPR spacer
tttatatctttattaattttatttttaaattaaataa---	Protospacer
*. ****** ****** ***********   ***.*    

176. spacer 8.4|1394404|37|NZ_CP029566|CRT,CRISPRCasFinder,PILER-CR matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 9, identity: 0.757

ctttgaaaaagagatagataaactaaatgtatcttat	CRISPR spacer
ttttcaaaaagagatagaaaaactaaaggcttcaaaa	Protospacer
.*** ************* ******** *. **  * 

177. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK721199 (Enterococcus phage vB_EfaS_Ef5.1, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

178. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK360024 (Enterococcus phage vB_EfaS_Max, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

179. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK721190 (Enterococcus phage vB_EfaS_Ef6.4, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

180. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_042101 (Enterococcus phage PMBT2, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

181. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK721200 (Enterococcus phage vB_EfaS_Ef5.3, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

182. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK982307 (Enterococcus phage MSF2, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

183. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MH193369 (Enterococcus phage LY0322, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

184. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MK721186 (Enterococcus phage vB_EfaS_Ef5.2, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

185. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to JX193904 (Enterococcus phage EfaCPT1, complete genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

186. spacer 17.11|2433903|36|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to KJ127304 (Enterococcus phage AUEF3, partial genome) position: , mismatch: 9, identity: 0.75

tctcacctccttctctataaatatattatatcatga	CRISPR spacer
aggaatcacctttgctataaatatattatatcataa	Protospacer
    *.* ****. ********************.*

187. spacer 1.35|472708|37|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 10, identity: 0.73

aaaaacatcaatctgattaaatttattatattgaata	CRISPR spacer
cattaaatcaatatgattatatttattatattatagt	Protospacer
 *  * ****** ****** ************. *  

188. spacer 5.14|887436|36|NZ_CP029566|CRISPRCasFinder,CRT matches to MN694265 (Marine virus AFVG_250M803, complete genome) position: , mismatch: 10, identity: 0.722

gtgcaaaacatttagaagcaaaagaagtaaaaataa	CRISPR spacer
tattaaaagatttagaagcagaagaagtaataggag	Protospacer
   .**** ***********.********* *. *.

189. spacer 5.17|887439|36|NZ_CP029566|PILER-CR matches to MN694265 (Marine virus AFVG_250M803, complete genome) position: , mismatch: 10, identity: 0.722

gtgcaaaacatttagaagcaaaagaagtaaaaataa	CRISPR spacer
tattaaaagatttagaagcagaagaagtaataggag	Protospacer
   .**** ***********.********* *. *.

190. spacer 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035115 (Lactobacillus plantarum strain SRCM103295 plasmid unnamed2) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

191. spacer 7.4|1029848|37|NZ_CP029566|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035567 (Lactobacillus plantarum strain SRCM103300 plasmid unnamed1) position: , mismatch: 10, identity: 0.73

tcaatatctatattaagtttatttttaaaaacatctt	CRISPR spacer
ttacaaaatagattaagtttattttaaaaaacattcc	Protospacer
*.*  *  ** ************** ********...

192. spacer 9.1|1689507|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 10, identity: 0.722

acaattattaattgttttattagtgaaatcacagca	CRISPR spacer
tgaattcttaattgttttattagagaaatacctttt	Protospacer
  **** **************** *****  *  . 

193. spacer 17.26|2434889|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to MN694667 (Marine virus AFVG_250M114, complete genome) position: , mismatch: 10, identity: 0.73

tgaacttgcgaaagataaagataagaaaattctttta	CRISPR spacer
agaacttgtgaaagataaagataaaaaagatataggc	Protospacer
 *******.***************.***. * *    

194. spacer 17.26|2434889|37|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to NC_019351 (Lactococcus lactis subsp. cremoris plasmid pAF22, complete sequence) position: , mismatch: 10, identity: 0.73

tgaacttgcgaaagataaagataagaaaattctttta	CRISPR spacer
tgttattgtcaaagataaagataagaaaattttaaac	Protospacer
**   ***. *********************.*    

195. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024393 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

196. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024208 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

197. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024336 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

198. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024355 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

199. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

200. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

201. spacer 1.36|472774|36|NZ_CP029566|CRISPRCasFinder,CRT matches to NZ_CP024374 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence) position: , mismatch: 11, identity: 0.694

gggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
ttttatccttaaaggaaatttttctttaatattatt	Protospacer
   .*     ** **************** ******

202. spacer 5.12|887304|37|NZ_CP029566|CRISPRCasFinder,CRT matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 11, identity: 0.703

ttcgcaacttatgatggtgaaatgattacattaacag	CRISPR spacer
attaagacttttgatggagaaatgattacatttgatg	Protospacer
 *.. .**** ****** ************** .  *

203. spacer 9.11|1690163|37|NZ_CP029566|CRISPRCasFinder,CRT,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 11, identity: 0.703

gttcatcagatggatatgcaaatggagatataaagtt	CRISPR spacer
caatagaagatggttatgcaaatggagatatgaaaaa	Protospacer
   .*  ****** *****************.**.  

204. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024393 (Borrelia miyamotoi strain Izh-4 plasmid pIzh4-lp41, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

205. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024208 (Borrelia miyamotoi strain Izh-5 plasmid pIzh5-lp41, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

206. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024336 (Borrelia miyamotoi strain Yekat-1 plasmid pYkt1-lp41, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

207. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024355 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-2, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

208. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024320 (Borrelia miyamotoi strain Yekat-6 plasmid pYkt6-lp41, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

209. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024354 (Borrelia miyamotoi strain Izh-16 plasmid pIzh16-lp41-1, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

210. spacer 1.11|472773|37|NZ_CP029566|PILER-CR matches to NZ_CP024374 (Borrelia miyamotoi strain Izh-14 plasmid pIzh14-lp41, complete sequence) position: , mismatch: 12, identity: 0.676

ggggcaaagaaaacggaaatttttctttaaaattatt	CRISPR spacer
attttatccttaaaggaaatttttctttaatattatt	Protospacer
.   .*     ** **************** ******

211. spacer 17.33|2435351|35|NZ_CP029566|CRT,PILER-CR,CRISPRCasFinder matches to CP041751 (Bacillus paranthracis strain NCCP 14796 plasmid unnamed1, complete sequence) position: , mismatch: 12, identity: 0.657

gaagaaagtaaaaaaagtaaacctttaatatcaag	CRISPR spacer
atgctgtctatagaaagtaaacctttaatatcatc	Protospacer
. .  .  ** *.********************  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 560298 : 634689 72 Clostridium_phage(41.38%) integrase,portal,tRNA,tail,protease,plate,transposase attL 554373:554391|attR 599521:599539
DBSCAN-SWA_2 716668 : 726395 11 Pandoravirus(37.5%) NA NA
DBSCAN-SWA_3 853072 : 909094 73 Clostridium_phage(83.87%) holin,integrase,portal,capsid,tail,terminase,plate,head attL 853653:853669|attR 887794:887810
DBSCAN-SWA_4 2241622 : 2250575 8 Catovirus(50.0%) NA NA
DBSCAN-SWA_5 3526336 : 3540074 11 Synechococcus_phage(30.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage