CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP034304	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-5, complete sequence	0 crisprs	NA	0	0
NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	1 crisprs	WYL	3	1
NZ_CP034298	Vibrio parahaemolyticus strain 20160303005-1 chromosome I, complete sequence	1 crisprs	cas3,DinG,csa3,cas5f,cas7f,cas6f,csx1,DEDDh,PD-DExK	1	5
NZ_CP034302	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-3, complete sequence	0 crisprs	PD-DExK	0	0
NZ_CP034303	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-4, complete sequence	0 crisprs	NA	0	0
NZ_CP034300	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-1, complete sequence	0 crisprs	PD-DExK	0	0
NZ_CP034299	Vibrio parahaemolyticus strain 20160303005-1 chromosome II, complete sequence	1 crisprs	cas3,csa3,WYL,DEDDh	0	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034301_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034301_1

32989-33178

Orphan

Consensus_repeat	Method
ATAGCTTAATATTAGGAAA	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP034301_1

>merge|NZ_CP034301|1|32989-33178|PILER-CR
TAGCTTAATATCAGGAAATTTCCTAACTTTAAGCTTTGTTTCTGTAAGCTAAAGCTTAATATTAGGAAATTGAAGCTTAATATTAGGAAGTTCATCTCTATCACATAGCTTAATATTAGGAAACACACCTATATCTAAGCTTAAAATGAGGAAACGCCTTAATCCGTATATATAGCTTAATTTTAGGAAA

>NZ_CP034301|1|1|32989-33178|PILER-CR
TAGCTTAATATCAGGAAAT	TTCCTAACTTTAAGCTTTGTTTCTGTAAGCTA
AAGCTTAATATTAGGAAAT	TGAAGCTTAATATTAGGAAGTTCATCTCTATCACA
TAGCTTAATATTAGGAAAC	ACACCTATATCTAAGCTTAAAATGAGGAAACGCCTTAATCCGTATATA
TAGCTTAATTTTAGGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034301.1\|WP_032073044.1\|42181_43057_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|224565
NZ_CP034301.1\|WP_046224241.1\|26149_26404_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_052715035.1\|35755_36130_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_014386655.1\|23659_23935_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_159408521.1\|38949_39465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_041154785.1\|39461_39971_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|214615
NZ_CP034301.1\|WP_082082773.1\|27293_28256_-\|RHS-repeat-associated-core-domain-containing-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP034301.1\|WP_046224237.1\|22528_23623_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_159408519.1\|27016_27301_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_014386860.1\|36768_37011_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_159408522.1\|40588_42163_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_046224239.1\|25489_25789_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_032073047.1\|38669_38945_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_014386648.1\|28245_28545_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_046224263.1\|26619_26919_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_159408520.1\|28566_32718_-\|type-IV-secretion-protein-Rhs	unknown	unknown	gnl\|CDD\|225750
NZ_CP034301.1\|WP_128740502.1\|24553_25186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_017086025.1\|39981_40404_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_046224245.1\|34296_35406_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034301.1\|WP_046224244.1\|33214_34300_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|316042

Protein	Function_ID	Function_description	E-value
NZ_CP034301.1\|WP_082082773.1\|27293_28256_-\|RHS-repeat-associated-core-domain-containing-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	1.69571e-32
NZ_CP034301.1\|WP_159408520.1\|28566_32718_-\|type-IV-secretion-protein-Rhs	gnl\|CDD\|225750	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane].	7.23971e-42
NZ_CP034301.1\|WP_046224244.1\|33214_34300_-\|AAA-family-ATPase	gnl\|CDD\|316042	pfam13481, AAA_25, AAA domain. This AAA domain is found in a wide variety of presumed DNA repair proteins.	9.84565e-18
NZ_CP034301.1\|WP_041154785.1\|39461_39971_-\|thermonuclease-family-protein	gnl\|CDD\|214615	smart00318, SNc, Staphylococcal nuclease homologues.	1.92597e-33
NZ_CP034301.1\|WP_032073044.1\|42181_43057_-\|DsbA-family-protein	gnl\|CDD\|224565	COG1651, DsbG, Protein-disulfide isomerase [Posttranslational modification, protein turnover, chaperones].	5.96918e-21

>NZ_CP034301.1|WP_159408520.1|28566_32718_-|type-IV-secretion-protein-Rhs
MDHFHTNLIARACLLALIVPSAVSAQWRINASGSSEIDAMRFDLPEQAHEFLRDYRINELASTHSYVSEKLYPSETYSDGRLISWLCMHRSDAPGSYDPDTCYFGALSGTTLTKFIIPGEMTDSPLLNRDLGKPETELCVGNPINLATGNKYQQETDYVSAGMEPLVFTRHYNSQLALSGKQSDVGIGWSHNYSNKVIFDKESHGENMVVLHRPDGKELAFYRTNAVWMTTWKSDDRLYKDSGWRYQRADGVVELYDSNGQLIRIVHPSGNELDLNYTNGKLDSVSDSFGRTLRFSYDQGKIIKMIDPAGQIFSYDYSNELLVAVHKPDANQRRYHYEDSLNPSLLTGLTDEKGSRFATWSYDPSGRAVLSEHSSGVDRTSVTYNPDGSVTVTNALGHEQHYLFSRYNGKLKPDSIQGAACTGFAGGTKSFGYDANGELKSIINEEGQSFSYQYDQRGLEISRTSSTGDTITTQWHSEFPKPTKITSSYLVQEFTYDDHQRLLTLKLIDRTNSDVRQWTFEYYPDSLGVPGQLKSVDGPRVDVDDVTRFEYDAQANLSRVINSLGHVVSFDNYDAHGRAQSVTDANGVSYSLNYNTLGQLISSTGPDGTTLYSYDESGLLVSITLPTNSTFTYEYDAAQQLMAVIDANGNRQSINRDLLGNIEQVELKDNSGIAHWKQLHSYTLNGWLSSTTNGTGNVYTYSYDKTANLTGKVDPSGNAYAYRYDGFSNLLQSIDPVNRATAMQYNDNALVTRVTDPRGRRTYYSYNGYGDVLSVQSPDTGTAHYTYDKAGNLIGKTDAKGQVFTYHYDALNRLSSITVDGQPNASVTFRYDEPEALYGVGQLTSITDASGVSKYSYTASGEIASQELIVDGRTLLTNYTYDGAGQLVSIEYPSGRKAVYQRNVAGEVIGVTLKNGVNSRTLVSDLVRKPFGPVTDLTHGNGLWEERHYDMNYQLESVQVAGAMHRSYLYTANSNVDSITDLMDSSYSQTFNYDKLSRLIEATGGYGTREYTYNYNGNRTAIYRDGVKDSYSIVFNSNRLTKTSIGSITYSYDANGNTIGRGTDVFVYDAFNRLTEATVNGETSIYHYNSAHQRVRKSAGGVDVLYVYGLDGELLAEVDAGTGQTQREYVWLDGQLVAYLVDGTVYHVHNDHLGTPQALTDETGATVWKASYSPFGKATVTTEQIKFNLRFPGQYYDAETGLHYNWHRYYDPNTGMYITSDPIGLAGGINTYAYALNNPAIYTDPTGLWVPQIIGAMVNIGFEGYRQYQTGSFDAGRLLVAGATGTLGGFGSTLRRAVFFGASSGAIGNMYIQLTEKSSGCDQRYQKSLDLYQVGRSAILGSFGGAVGFGGGILGKNILRPRDIIGVDLKKGLVLTTNRMVRL
>NZ_CP034301.1|WP_014386648.1|28245_28545_-|hypothetical-protein
MEINNWLDFVLYTFMTLGGLLIAIPLGIRCLYVGLVALFKYKIVKFKKDSNVSVYANTSIELVLLGIFCIGASIWFLFFDKGGHLLHYLPEVMRFFAGT
>NZ_CP034301.1|WP_082082773.1|27293_28256_-|RHS-repeat-associated-core-domain-containing-protein
MEHKAGYAGGVDVLYVYGLDGELLAEVDAGTGQTQREYVWLDGQLVAYLVDGTVYHVHNDHLGTPQALTDETGATVWKASYSPFGKATVTTEQIKFNLRFPGQYYDAETGLHYNWHRYYDPSLGRYLQSDRLGLFDGMDTYGYVRGNPLVWSDPTGQFVPQLAGFIAGGGVSAFSYWEKYKCGSISGAEYLASIAIGAGAGAISSGASVIDGALIALAGNVAEQYFVGDEFSYSSMGMAGGIAALSGKAGQVLGKSLFPSKYITVTERRWYTLFLYKHKKTQEVFNADGRAITGSVVAGGVTGGIAASFGSKDKCGCSGE
>NZ_CP034301.1|WP_159408519.1|27016_27301_-|hypothetical-protein
MNSKKFFQKIVIFGAYSLIALIVVFAIGALLYVNEVNNGVGDIMSLIAKAGVFILVVTPIPLLVNNYLRNKITLFQFVFSLLLLGSVGVGFFFG
>NZ_CP034301.1|WP_046224263.1|26619_26919_-|hypothetical-protein
MEINSWFDFIIYTIYFFGVVVIILPVGAIFLWLTLKNLIKMRLPKYERKHYKYFFARNVLEVCIAGGGSAIFSVWYLFFAKGGNLFLYPMEVMTFFLGS
>NZ_CP034301.1|WP_046224241.1|26149_26404_-|hypothetical-protein
MKNRSITTFILIFVVPIFLIGVGIGSIGGFIAQWLAQIFELYENESKYEMVFWAFFIIGAVMGGVGGIQALFQFIRQKKNGARK
>NZ_CP034301.1|WP_046224239.1|25489_25789_-|hypothetical-protein
MEINNWVDFYLYTAYFIGVIVVLIPLGINFTYVGIAGVIKHKKIKYDKGTDIYRLGKNVFEIVGVGVFAIAFSIWFLFFDKGGHLFHYPAEVMRFFAGT
>NZ_CP034301.1|WP_128740502.1|24553_25186_-|hypothetical-protein
MVLVLRQGWAPIPLPSGSDEVLRWNIRRVKPAGGVDVLYVYGLDGELLAEVDAGTGQTQREYEYQGDKMASQYQYNPFLIGKDTFTTSKVELCEDEVRQSKPQYQLICFGSSSRYPLWIELGTNQLVGGNYHCFYNDDELKALYTLFQQDAQRQGYSDQKQNYWAKTPNPFPIEFLEGMPQSLWAYFYESGRRQAACEKSVQELLPMFEK
>NZ_CP034301.1|WP_014386655.1|23659_23935_-|hypothetical-protein
MSGVVFHQVKEGEFRRLAETRTMTKLIAQESKLHPNKFHLVGIDSGKGIAYAIRHGRTSDLRVWRLDILVNQVRDMGFENIEVQLINKTHA
>NZ_CP034301.1|WP_046224237.1|22528_23623_+|hypothetical-protein
MDIWHYPRTQLATFILNGMDKGLLQRVSIFAPRKRGKTQFIQKDIIPMARELGVLPIYVDFWMQKDDPEGIFIKSVIDACERNEGFLHKLGKALNFKKLGFSAAGGKVEVERSQGELRADLFAVFQRLNELDMPVLLLLDEVQHLATRKEFDSFTAALRSFVVNREDNNVKCIFTGSSREGLSRLFKDNKAPFYNSSQTQIFEELDMDFVEFELAAFKNVTGGVELDKHKALEILIKQNRAPARFVEMLKNMALNMVHDLDIGVHRYDVDRIESEDHFSKTYEQLKPIEVAILKLVAANESKGLYTKAGLDKVKAFTGDPETDVTKWSVKNAVTRLKSLELIYSPERGKLEIENHDFRDYILEK
>NZ_CP034301.1|WP_046224244.1|33214_34300_-|AAA-family-ATPase
MTTTLHNEDVIALSEEDINESLANSNKEQILKGLFRGSVGFLIAPPDSGKSYLSLSIAYEMALPEYPLIGVRDEENKVLRTLIWPIEDSLPGTLPRIKAHLTEFSTSIKDRLKSSIGIYKHSDPICSSGSSKHTKEWEEASSALEKLIATAKGYDLVVIDTLRDAIGSADVVDDDYYIRIALERLANEANVAVLVVHHPTKDVSRGKEIINSVSGSGLSSTLSKSKLHLYLDQLIDKKDGTVQETRLRHIKANYVPFDQQWRKPIRLHWSNNSLLHVDQEVVIQLRNDQLDGDSDNEKKPGADKPVKRRLSRLSEEPGLIHRDDSLLSEESKRLAQQTSHGPFGGGMASELSELRTGKSSK
>NZ_CP034301.1|WP_046224245.1|34296_35406_-|hypothetical-protein
MSSNTDNLEGYFPAEIVNEAFGSRPSTTTLMDCIFLPGRIPRDLITRISGNKAELEQQLLAQKPLLSTSLSKPYWKKGTNKREFDAVRIDVYSAVCLADDRHLLEGIVSVGGMYVDLSGLTLRQAIELAQINVELDKLSHQYHNLLDTKMFSGVYDYFLCDFTTLFEFLNLKNQKANKNTVMTRLQRLSQMLLVLDYEKDGETLPHYHTRMKLVDSNYIPLLVLDGIKNKGSIRADTITHFIVGVHKTFTASLRQEGAISRKRFLKVYPQLTGKHAVTDFCKYIDAHKREYVHGKYLSHLIKDYYANKVRVSKQHLSRHINNTMAEVILKKDVLLRDFRLLLQEKVRDDGKQDIMLLYLGDEEKEEVTT
>NZ_CP034301.1|WP_052715035.1|35755_36130_+|hypothetical-protein
MRHILNLVALAVILLGVAMIETNDNQWGLAVISVAVVFWLMPLLRLVHKNAVVMVVFWSGVAYFSWQVAVVALLAFVVFSATASIKRVPNTPAIKKQRFIVNPSSGLVMKNKHFDIAGNGFAIL
>NZ_CP034301.1|WP_014386860.1|36768_37011_-|hypothetical-protein
MNKPSNTPSTLVVSMLCILVLALEFAAVTHFTGSTSPLDWDRITLISVAYLAASTILGATFCLVKSKLRFNTLQHQKNLG
>NZ_CP034301.1|WP_032073047.1|38669_38945_+|hypothetical-protein
MFKLNTLHEAVPGVDLDSLPDIKAVIGQAEPLEASMMTVIAYREMHNANILNLSERERFFLSMSLMKCFVEKGLLSSGDMMKYRLSHVKVG
>NZ_CP034301.1|WP_159408521.1|38949_39465_-|hypothetical-protein
MKLSINNQLGRDVSTLALNVFGIFVYISLIRIYLHQLTLPEPLLFALMFSLVFNIYYEFKAGISRLTHVRILCTIIIFCVAAFLAQEIRGVYLTTMTELTNYENAEELIGQEYLKAAQNRVVGYGGCFAVGLVTARMLLYKILVNVASRVLVLPNYRSNVCPMCQQPTQIH
>NZ_CP034301.1|WP_041154785.1|39461_39971_-|thermonuclease-family-protein
MLKKILTTTLLYFVFNAPIMAETFYGKVVRVSDGDTIKVLTDASCTGTYQCTDGKKEHRIRLAEIDTPESKQPWGKKAKQALLSIVGGKVVRVEQTDVDRYGRIVGHIYVDDLWVNGQLVKTGNAWVYRRYAKSTELFSYEQEAKQNGVGLWALPEAERMPPWEWRRKK
>NZ_CP034301.1|WP_017086025.1|39981_40404_-|hypothetical-protein
MKPQMMIKMAAAYMMASAVIWSAGVWLLELPSPLGTQTWTTWLGGPILVLVCASFISYLLVTYHSTGLLFTKIWMLCNVCLSGYSLFMTFNDLMLAGGCLAILLGSLWFLKELERPEMKGAYTAISALHKQMWNALSGQQ
>NZ_CP034301.1|WP_159408522.1|40588_42163_-|hypothetical-protein
MLRRTALAAALLSVLAGCGGSSGGTGTTSNGNGSESNNQDNSTETTTVAKREWQKEVLLSSPTRDATLPVIQLQNENGSAVLYSAWVEEANNDKPDELYASVAPIEDYANGNVPNKVKISADIGEILRSDWQPFIVDENHYKSSVQMSLSNHGNAYITWVQRDNSNNQKLNVSYYDATTQEWSPPLEVDHVLMTDAAATNEESRVKITDNTLFTDPSGQSIVIWQTPIFGSDTNALAIAWLSNDGTKANIIATTELSRNIKTNSDGEVKSAISIHSVETSPGVLEILSIEKGADDENDVLAKHTVKLGPFNTPVVERSVIDDDGVNSGLASINTNLTSYALWSESRGSGSSDLIGVTWRSDNNGYSPISGIPNISADAGQASLTSTNGDVHAVWRQRDNVVGNTIRTEKLMFATLEQSIASNVTELNSNGAIYPRLFSGNDDKLYTTWNGEYFHIKEAYIESGDIHWQETYRPSCDPTTAIDDLLCGLGVRERYSAMVDGDYGAMSWLKDVNGTKSVFISISTN
>NZ_CP034301.1|WP_032073044.1|42181_43057_-|DsbA-family-protein
MSEQTTPQQQKSFSPMQKKLLAVGAAMTLILGASVATVGYQIYQTKELLIQERDSLQSKITQLESDYRFKSEERFNNAVQKALEHFVQQKREQDIQAKYAKYESAPEQVPDDKRIYGNLNARFTLVEFSDLECPFCKKFHDTPKEVVDASNGNINWQWKHLPLSFHNPAAEKEALAAECVAEQKGNRGFWVFLDEVFAKSQGNGGGVPNLAEVIESVGADASLVRECLASGRYDLKIAADVKQATENGISGTPATFIVDNQTGKTQLIRGAQPSQAIAAIIRKMMIESENN

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	77733-77764	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	1263-1294	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NZ_KP791968	Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence	148759-148790	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NZ_CP025539	Vibrio harveyi strain 345 plasmid p345-185, complete sequence	62561-62592	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MN865127	Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence	15377-15408	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NC_025127	Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence	1264-1295	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	1264-1295	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	33007-33038	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	KX957970	Vibrio parahaemolyticus plasmid pVPS43, complete sequence	153295-153326	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	KX957971	Vibrio parahaemolyticus plasmid pVPS62, complete sequence	142367-142398	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	152360-152391	0	1.0
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	KX957969	Vibrio alginolyticus plasmid pVAS114, complete sequence	157170-157201	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	77784-77818	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	33058-33092	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	1209-1243	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NZ_CP025539	Vibrio harveyi strain 345 plasmid p345-185, complete sequence	62507-62541	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	MN865127	Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence	15323-15357	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	KX957970	Vibrio parahaemolyticus plasmid pVPS43, complete sequence	153241-153275	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	KX957971	Vibrio parahaemolyticus plasmid pVPS62, complete sequence	142313-142347	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	152306-152340	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	KX957969	Vibrio alginolyticus plasmid pVAS114, complete sequence	157116-157150	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NZ_CP014052	Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence	77838-77885	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NZ_CP034301	Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence	33112-33159	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NZ_KP688397	Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence	1142-1189	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NZ_CP025539	Vibrio harveyi strain 345 plasmid p345-185, complete sequence	62440-62487	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	MN865127	Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence	15256-15303	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NC_025127	Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence	1143-1190	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	1143-1190	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	KX957970	Vibrio parahaemolyticus plasmid pVPS43, complete sequence	153174-153221	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	KX957971	Vibrio parahaemolyticus plasmid pVPS62, complete sequence	142246-142293	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	KX957968	Vibrio alginolyticus plasmid pVAS19, complete sequence	152239-152286	0	1.0
NZ_CP034301_1	1.3\|33113\|48\|NZ_CP034301\|PILER-CR	33113-33160	48	KX957969	Vibrio alginolyticus plasmid pVAS114, complete sequence	157049-157096	0	1.0
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NC_025127	Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence	1210-1244	1	0.971
NZ_CP034301_1	1.2\|33059\|35\|NZ_CP034301\|PILER-CR	33059-33093	35	NC_016983	Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence	1210-1244	1	0.971
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	KX957972	Vibrio parahaemolyticus plasmid pVPS91, complete sequence	113124-113155	3	0.906
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497078	Flavobacterium phage vB_Fsp_elemo10-3D, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497108	Flavobacterium phage vB_Fsp_elemo4-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497121	Flavobacterium phage vB_Fsp_elemo8-1D, partial genome	34983-35014	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497101	Flavobacterium phage vB_Fsp_elemo2-5B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497069	Flavobacterium phage vB_Fsp_elemo15-9B, partial genome	54856-54887	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497123	Flavobacterium phage vB_Fsp_elemo8-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497079	Flavobacterium phage vB_Fsp_elemo10-9A, partial genome	6477-6508	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497094	Flavobacterium phage vB_Fsp_elemo14-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497076	Flavobacterium phage vB_Fsp_elemo1-9B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497115	Flavobacterium phage vB_Fsp_elemo7-3B, partial genome	5742-5773	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497082	Flavobacterium phage vB_Fsp_elemo11-9B, partial genome	8494-8525	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497088	Flavobacterium phage vB_Fsp_elemo13-1E, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497085	Flavobacterium phage vB_Fsp_elemo12-3A, partial genome	5742-5773	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497095	Flavobacterium phage vB_Fsp_elemo14-9B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497110	Flavobacterium phage vB_Fsp_elemo5-9A, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497096	Flavobacterium phage vB_Fsp_elemo15-3B, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497114	Flavobacterium phage vB_Fsp_elemo7-3A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497120	Flavobacterium phage vB_Fsp_elemo8-1B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497087	Flavobacterium phage vB_Fsp_elemo13-1B, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497117	Flavobacterium phage vB_Fsp_elemo7-9B, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497119	Flavobacterium phage vB_Fsp_elemo8-1A, partial genome	15555-15586	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497112	Flavobacterium phage vB_Fsp_elemo6-5A, partial genome	45691-45722	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497099	Flavobacterium phage vB_Fsp_elemo15-9C, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497097	Flavobacterium phage vB_Fsp_elemo15-3D, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497089	Flavobacterium phage vB_Fsp_elemo13-3B, partial genome	14663-14694	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497070	Flavobacterium phage vB_Fsp_elemo2-5C, partial genome	55384-55415	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497017	Flavobacterium phage vB_Fsp_elemo7-9A, complete genome	56474-56505	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497109	Flavobacterium phage vB_Fsp_elemo5-3D, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497104	Flavobacterium phage vB_Fsp_elemo2-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497125	Flavobacterium phage vB_Fsp_elemo9-1A, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497118	Flavobacterium phage vB_Fsp_elemo7-9C, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497072	Flavobacterium phage vB_Fsp_elemo6-9C, partial genome	54762-54793	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497077	Flavobacterium phage vB_Fsp_elemo1-9C, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497068	Flavobacterium phage vB_Fsp_elemo14-3B, partial genome	55708-55739	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497105	Flavobacterium phage vB_Fsp_elemo3-5A, partial genome	24693-24724	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497107	Flavobacterium phage vB_Fsp_elemo3-9B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497091	Flavobacterium phage vB_Fsp_elemo13-5B, partial genome	35781-35812	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497113	Flavobacterium phage vB_Fsp_elemo6-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497116	Flavobacterium phage vB_Fsp_elemo7-5A, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497065	Flavobacterium phage vB_Fsp_elemo13-1A, partial genome	55893-55924	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497122	Flavobacterium phage vB_Fsp_elemo8-3A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497106	Flavobacterium phage vB_Fsp_elemo3-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497102	Flavobacterium phage vB_Fsp_elemo2-5F, partial genome	32804-32835	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497074	Flavobacterium phage vB_Fsp_elemo1-5B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497092	Flavobacterium phage vB_Fsp_elemo13-9B, partial genome	47155-47186	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497098	Flavobacterium phage vB_Fsp_elemo15-9A, partial genome	23501-23532	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497081	Flavobacterium phage vB_Fsp_elemo11-5C, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497103	Flavobacterium phage vB_Fsp_elemo2-5G, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497124	Flavobacterium phage vB_Fsp_elemo8-9B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497093	Flavobacterium phage vB_Fsp_elemo14-3D, partial genome	54988-55019	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497083	Flavobacterium phage vB_Fsp_elemo11-9C, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497084	Flavobacterium phage vB_Fsp_elemo12-1B, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497086	Flavobacterium phage vB_Fsp_elemo12-9A, partial genome	17193-17224	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497067	Flavobacterium phage vB_Fsp_elemo14-1A, partial genome	55831-55862	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497066	Flavobacterium phage vB_Fsp_elemo13-1C, partial genome	55241-55272	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497100	Flavobacterium phage vB_Fsp_elemo2-5A, partial genome	5833-5864	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497071	Flavobacterium phage vB_Fsp_elemo6-3D, partial genome	54629-54660	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497080	Flavobacterium phage vB_Fsp_elemo10-9C, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497111	Flavobacterium phage vB_Fsp_elemo5-9B, partial genome	5743-5774	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497075	Flavobacterium phage vB_Fsp_elemo1-9A, partial genome	5832-5863	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497073	Flavobacterium phage vB_Fsp_elemo8-9C, partial genome	55733-55764	9	0.719
NZ_CP034301_1	1.1\|33008\|32\|NZ_CP034301\|PILER-CR	33008-33039	32	MT497090	Flavobacterium phage vB_Fsp_elemo13-3D, partial genome	35865-35896	9	0.719

1. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

2. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

3. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NZ_KP791968 (Vibrio parahaemolyticus strain 2011VPH2 plasmid pVPH2, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

4. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NZ_CP025539 (Vibrio harveyi strain 345 plasmid p345-185, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

5. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MN865127 (Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

6. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NC_025127 (Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

7. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

8. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

9. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to KX957970 (Vibrio parahaemolyticus plasmid pVPS43, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

10. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to KX957971 (Vibrio parahaemolyticus plasmid pVPS62, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

11. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

12. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to KX957969 (Vibrio alginolyticus plasmid pVAS114, complete sequence) position: , mismatch: 0, identity: 1.0

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcctaactttaagctttgtttctgtaagct	Protospacer
********************************

13. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

14. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

15. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

16. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NZ_CP025539 (Vibrio harveyi strain 345 plasmid p345-185, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

17. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to MN865127 (Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

18. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to KX957970 (Vibrio parahaemolyticus plasmid pVPS43, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

19. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to KX957971 (Vibrio parahaemolyticus plasmid pVPS62, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

20. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

21. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to KX957969 (Vibrio alginolyticus plasmid pVAS114, complete sequence) position: , mismatch: 0, identity: 1.0

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctatcac	Protospacer
***********************************

22. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NZ_CP014052 (Vibrio alginolyticus strain FDAARGOS_108 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

23. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NZ_CP034301 (Vibrio parahaemolyticus strain 20160303005-1 plasmid pVPSD2016-2, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

24. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NZ_KP688397 (Vibrio parahaemolyticus strain V36 plasmid pVPH1, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

25. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NZ_CP025539 (Vibrio harveyi strain 345 plasmid p345-185, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

26. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to MN865127 (Vibrio alginolyticus strain C1579 plasmid pC1579, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

27. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NC_025127 (Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

28. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

29. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to KX957970 (Vibrio parahaemolyticus plasmid pVPS43, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

30. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to KX957971 (Vibrio parahaemolyticus plasmid pVPS62, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

31. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to KX957968 (Vibrio alginolyticus plasmid pVAS19, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

32. spacer 1.3|33113|48|NZ_CP034301|PILER-CR matches to KX957969 (Vibrio alginolyticus plasmid pVAS114, complete sequence) position: , mismatch: 0, identity: 1.0

cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	CRISPR spacer
cacacctatatctaagcttaaaatgaggaaacgccttaatccgtatat	Protospacer
************************************************

33. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NC_025127 (Vibrio sp. 04Ya090 plasmid pAQU2 DNA, complete sequence) position: , mismatch: 1, identity: 0.971

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctataac	Protospacer
******************************** **

34. spacer 1.2|33059|35|NZ_CP034301|PILER-CR matches to NC_016983 (Photobacterium damselae subsp. damselae plasmid pAQU1, complete sequence) position: , mismatch: 1, identity: 0.971

ttgaagcttaatattaggaagttcatctctatcac	CRISPR spacer
ttgaagcttaatattaggaagttcatctctataac	Protospacer
******************************** **

35. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to KX957972 (Vibrio parahaemolyticus plasmid pVPS91, complete sequence) position: , mismatch: 3, identity: 0.906

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tttcccaagtttaagctttgtttctgtaaggt	Protospacer
*****.** ********************* *

36. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497078 (Flavobacterium phage vB_Fsp_elemo10-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

37. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497108 (Flavobacterium phage vB_Fsp_elemo4-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

38. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497121 (Flavobacterium phage vB_Fsp_elemo8-1D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

39. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497101 (Flavobacterium phage vB_Fsp_elemo2-5B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

40. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497069 (Flavobacterium phage vB_Fsp_elemo15-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

41. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497123 (Flavobacterium phage vB_Fsp_elemo8-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

42. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497079 (Flavobacterium phage vB_Fsp_elemo10-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

43. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497094 (Flavobacterium phage vB_Fsp_elemo14-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

44. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497076 (Flavobacterium phage vB_Fsp_elemo1-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

45. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497115 (Flavobacterium phage vB_Fsp_elemo7-3B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

46. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497082 (Flavobacterium phage vB_Fsp_elemo11-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

47. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497088 (Flavobacterium phage vB_Fsp_elemo13-1E, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

48. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497085 (Flavobacterium phage vB_Fsp_elemo12-3A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

49. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497095 (Flavobacterium phage vB_Fsp_elemo14-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

50. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497110 (Flavobacterium phage vB_Fsp_elemo5-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

51. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497096 (Flavobacterium phage vB_Fsp_elemo15-3B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

52. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497114 (Flavobacterium phage vB_Fsp_elemo7-3A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

53. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497120 (Flavobacterium phage vB_Fsp_elemo8-1B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

54. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497087 (Flavobacterium phage vB_Fsp_elemo13-1B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

55. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497117 (Flavobacterium phage vB_Fsp_elemo7-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

56. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497119 (Flavobacterium phage vB_Fsp_elemo8-1A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

57. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497112 (Flavobacterium phage vB_Fsp_elemo6-5A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

58. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497099 (Flavobacterium phage vB_Fsp_elemo15-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

59. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497097 (Flavobacterium phage vB_Fsp_elemo15-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

60. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497089 (Flavobacterium phage vB_Fsp_elemo13-3B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

61. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497070 (Flavobacterium phage vB_Fsp_elemo2-5C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

62. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497017 (Flavobacterium phage vB_Fsp_elemo7-9A, complete genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

63. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497109 (Flavobacterium phage vB_Fsp_elemo5-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

64. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497104 (Flavobacterium phage vB_Fsp_elemo2-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

65. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497125 (Flavobacterium phage vB_Fsp_elemo9-1A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

66. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497118 (Flavobacterium phage vB_Fsp_elemo7-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

67. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497072 (Flavobacterium phage vB_Fsp_elemo6-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

68. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497077 (Flavobacterium phage vB_Fsp_elemo1-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

69. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497068 (Flavobacterium phage vB_Fsp_elemo14-3B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

70. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497105 (Flavobacterium phage vB_Fsp_elemo3-5A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

71. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497107 (Flavobacterium phage vB_Fsp_elemo3-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

72. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497091 (Flavobacterium phage vB_Fsp_elemo13-5B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

73. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497113 (Flavobacterium phage vB_Fsp_elemo6-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

74. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497116 (Flavobacterium phage vB_Fsp_elemo7-5A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

75. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497065 (Flavobacterium phage vB_Fsp_elemo13-1A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

76. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497122 (Flavobacterium phage vB_Fsp_elemo8-3A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

77. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497106 (Flavobacterium phage vB_Fsp_elemo3-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

78. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497102 (Flavobacterium phage vB_Fsp_elemo2-5F, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

79. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497074 (Flavobacterium phage vB_Fsp_elemo1-5B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

80. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497092 (Flavobacterium phage vB_Fsp_elemo13-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

81. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497098 (Flavobacterium phage vB_Fsp_elemo15-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

82. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497081 (Flavobacterium phage vB_Fsp_elemo11-5C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

83. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497103 (Flavobacterium phage vB_Fsp_elemo2-5G, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

84. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497124 (Flavobacterium phage vB_Fsp_elemo8-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

85. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497093 (Flavobacterium phage vB_Fsp_elemo14-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

86. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497083 (Flavobacterium phage vB_Fsp_elemo11-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

87. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497084 (Flavobacterium phage vB_Fsp_elemo12-1B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

88. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497086 (Flavobacterium phage vB_Fsp_elemo12-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

89. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497067 (Flavobacterium phage vB_Fsp_elemo14-1A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

90. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497066 (Flavobacterium phage vB_Fsp_elemo13-1C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

91. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497100 (Flavobacterium phage vB_Fsp_elemo2-5A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

92. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497071 (Flavobacterium phage vB_Fsp_elemo6-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

93. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497080 (Flavobacterium phage vB_Fsp_elemo10-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

94. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497111 (Flavobacterium phage vB_Fsp_elemo5-9B, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

95. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497075 (Flavobacterium phage vB_Fsp_elemo1-9A, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

96. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497073 (Flavobacterium phage vB_Fsp_elemo8-9C, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

97. spacer 1.1|33008|32|NZ_CP034301|PILER-CR matches to MT497090 (Flavobacterium phage vB_Fsp_elemo13-3D, partial genome) position: , mismatch: 9, identity: 0.719

tttcctaactttaagctttgtttctgtaagct	CRISPR spacer
tactccttctttaagcattggttctgtaagca	Protospacer
* ..*.  ******** *** **********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

70582 : 96532

Escherichia_phage(27.27%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001352368.1\|70582_71791_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_000428546.1\|72304_72898_+	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_014386815.1\|73010_74216_-	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_001322387.1\|74294_74921_+	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_159408523.1\|75174_78153_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	1.7e-37	22.3
WP_001749986.1\|78916_79369_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_001749985.1\|79501_79975_+	trimethoprim-resistant dihydrofolate reductase DfrA27	G3MBI7	Bacillus_virus	1.4e-15	29.1
WP_001749984.1\|80155_81001_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16	NA	NA	NA	NA
WP_000679427.1\|81117_81465_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|81458_82298_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|82425_82926_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004152787.1\|82908_83049_-	hypothetical protein	NA	NA	NA	NA
WP_001389365.1\|83432_84197_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_011191339.1\|84488_85058_+	recombinase family protein	E5FFF9	Burkholderia_phage	1.4e-41	51.6
WP_017411290.1\|85349_86567_-	tetracycline efflux MFS transporter Tet(E)	NA	NA	NA	NA
WP_017411289.1\|86647_87280_+	tetracycline resistance transcriptional repressor TetR(E)	NA	NA	NA	NA
WP_005323884.1\|87372_87510_+	hypothetical protein	NA	NA	NA	NA
WP_159408524.1\|87911_88322_+	hypothetical protein	NA	NA	NA	NA
WP_159408525.1\|88406_91385_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	6.7e-34	21.6
WP_000027057.1\|91701_92562_-	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001235713.1\|92744_93302_-	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_001067858.1\|93496_94201_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_159408526.1\|94535_94928_+	NimC/NimA family protein	NA	NA	NA	NA
WP_063102497.1\|95247_95634_-	bleomycin binding protein	NA	NA	NA	NA
WP_001067858.1\|95827_96532_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP034298

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034298_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034298_1

1032600-1032808

Unclear

Consensus_repeat	Method
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CRISPRCasFinder
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CRT

3 spacers

cas6f,cas7f,cas5f

The CRISPR arrays of NZ_CP034298_1

>merge|NZ_CP034298|1|1032600-1032808|CRISPRCasFinder,CRT
GTGTCCTGCCGAATAGGCAGCTAAGAATGCGTCCCGAGTTTTTGGGCATGATGCACGACGGTGTCCTGCCGAATAGGCAGCTAAGAATGCTCGATGCAAGTCGAGAGTTTTTGCAGGATCGTGTCCTGCCGAATAGGCAGCTAAGAATGTCGTGAAATAGAACATTTTGAACAAAAGTCTGTGTCCTGCCGCGTAGGCAGCTAGGAATA

>NZ_CP034298|1|1|1032600-1032808|CRISPRCasFinder
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CGTCCCGAGTTTTTGGGCATGATGCACGACG
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CTCGATGCAAGTCGAGAGTTTTTGCAGGATC
GTGTCCTGCCGAATAGGCAGCTAAGAATG	TCGTGAAATAGAACATTTTGAACAAAAGTCT
GTGTCCTGCCGCGTAGGCAGCTAGGAATA

>NZ_CP034298|1|1|1032600-1032808|CRT
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CGTCCCGAGTTTTTGGGCATGATGCACGACG
GTGTCCTGCCGAATAGGCAGCTAAGAATG	CTCGATGCAAGTCGAGAGTTTTTGCAGGATC
GTGTCCTGCCGAATAGGCAGCTAAGAATG	TCGTGAAATAGAACATTTTGAACAAAAGTCT
GTGTCCTGCCGCGTAGGCAGCTAGGAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034298.1\|WP_114867346.1\|1027517_1028729_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377670
NZ_CP034298.1\|WP_114867957.1\|1031865_1032471_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	cd09739_cas6f_CAS-I-F:CAS-IV	gnl\|CDD\|187870
NZ_CP034298.1\|WP_114867344.1\|1024892_1026485_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379114
NZ_CP034298.1\|WP_114867353.1\|1041836_1042079_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|179020
NZ_CP034298.1\|WP_114867354.1\|1042319_1042562_+\|DUF2384-domain-containing-protein	unknown	unknown	gnl\|CDD\|378249
NZ_CP034298.1\|WP_114867956.1\|1023383_1024250_-\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198394
NZ_CP034298.1\|WP_114867350.1\|1036867_1037461_-\|DUF4123-domain-containing-protein	unknown	unknown	gnl\|CDD\|379225
NZ_CP034298.1\|WP_159408349.1\|1037442_1039701_-\|type-VI-secretion-system-tip-protein-VgrG	unknown	unknown	gnl\|CDD\|274542
NZ_CP034298.1\|WP_159408348.1\|1026477_1027374_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372995
NZ_CP034298.1\|WP_114867352.1\|1041225_1041711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034298.1\|WP_159408350.1\|1042672_1042810_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034298.1\|WP_114867355.1\|1042958_1043999_+\|SMEK-domain-containing-protein	unknown	unknown	unknown
NZ_CP034298.1\|WP_114867348.1\|1033193_1034270_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	unknown	unknown	gnl\|CDD\|335469
NZ_CP034298.1\|WP_114867351.1\|1040115_1040943_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP034298.1\|WP_114867347.1\|1028731_1030819_+\|hypothetical-protein	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|187867
NZ_CP034298.1\|WP_114867349.1\|1034293_1036855_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP034298.1\|WP_039483175.1\|1021049_1021364_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP034298.1\|WP_140271711.1\|1030825_1031857_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	cd09737_cas7f_CAS-I-F	gnl\|CDD\|187868
NZ_CP034298.1\|WP_114867343.1\|1022004_1023387_+\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|223989
NZ_CP034298.1\|WP_114867342.1\|1021465_1022011_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP034298.1\|WP_114867346.1\|1027517_1028729_+\|hypothetical-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	5.54378e-11
NZ_CP034298.1\|WP_114867957.1\|1031865_1032471_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|187870	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6f is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-F subtype; Possesses RRM fold; also known as Csy4 family.	1.94068e-53
NZ_CP034298.1\|WP_114867344.1\|1024892_1026485_+\|ATP-binding-protein	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	5.08015e-08
NZ_CP034298.1\|WP_114867353.1\|1041836_1042079_+\|hypothetical-protein	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	9.85609e-09
NZ_CP034298.1\|WP_114867354.1\|1042319_1042562_+\|DUF2384-domain-containing-protein	gnl\|CDD\|378249	pfam09722, DUF2384, Protein of unknown function (DUF2384). Proteins in this family are found almost exclusively in the Proteobacteria, but also in Gloeobacter violaceus PCC 7421, a cyanobacterium. The function is unknown.	9.26529e-11
NZ_CP034298.1\|WP_114867956.1\|1023383_1024250_-\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198394	cd10447, GIY-YIG_unchar_2, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria and archaea. The family includes a group of uncharacterized hypothetical proteins, mainly found in bacteria and a few found in archaea, with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	8.64546e-38
NZ_CP034298.1\|WP_114867350.1\|1036867_1037461_-\|DUF4123-domain-containing-protein	gnl\|CDD\|379225	pfam13503, DUF4123, Domain of unknown function (DUF4123). This presumed domain is functionally uncharacterized. It is about 120 amino acids in length and contains several conserved motifs that may be functionally important. This domain is sometimes associated with the FHA domain.	1.64785e-14
NZ_CP034298.1\|WP_159408349.1\|1037442_1039701_-\|type-VI-secretion-system-tip-protein-VgrG	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	0
NZ_CP034298.1\|WP_159408348.1\|1026477_1027374_+\|hypothetical-protein	gnl\|CDD\|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	0.0020025
NZ_CP034298.1\|WP_114867348.1\|1033193_1034270_+\|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme	gnl\|CDD\|335469	pfam03781, FGE-sulfatase, Sulfatase-modifying factor enzyme 1. This domain is found in eukaryotic proteins required for post-translational sulfatase modification (SUMF1). These proteins are associated with the rare disorder multiple sulfatase deficiency (MSD). The protein product of the SUMF1 gene is FGE, formylglycine (FGly),-generating enzyme, which is a sulfatase. Sulfatases are enzymes essential for degradation and remodelling of sulfate esters, and formylglycine (FGly), the key catalytic in the active site, is unique to sulfatases. FGE is localized to the endoplasmic reticulum (ER) and interacts with and modifies the unfolded form of newly synthesized sulfatases. FGE is a single-domain monomer with a surprising paucity of secondary structure that adopts a unique fold which is stabilized by two Ca2+ ions. The effect of all mutations found in MSD patients is explained by the FGE structure, providing a molecular basis for MSD. A redox-active disulfide bond is present in the active site of FGE. An oxidized cysteine residue, possibly cysteine sulfenic acid, has been detected that may allow formulation of a structure-based mechanism for FGly formation from cysteine residues in all sulfatases. In Mycobacteria and Treponema denticola this enzyme functions as an iron(II)-dependent oxidoreductase.	1.34941e-23
NZ_CP034298.1\|WP_114867351.1\|1040115_1040943_+\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	6.35937e-35
NZ_CP034298.1\|WP_114867347.1\|1028731_1030819_+\|hypothetical-protein	gnl\|CDD\|187867	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas5 ortholog.	3.38096e-18
NZ_CP034298.1\|WP_114867349.1\|1034293_1036855_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	5.78853e-06
NZ_CP034298.1\|WP_039483175.1\|1021049_1021364_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.5899e-13
NZ_CP034298.1\|WP_140271711.1\|1030825_1031857_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|187868	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; predicted Cas7 ortholog.	2.30254e-151
NZ_CP034298.1\|WP_114867343.1\|1022004_1023387_+\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|223989	COG1061, SSL2, DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair].	1.48991e-29

>NZ_CP034298.1|WP_114867957.1|1031865_1032471_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MTKRYYFCIRYTPVQADYELLAGRCISQMHLFMVNNRQSINKIGVSFPDWSDVTVGQTIAFVAEDKEMMIGLSFQPYFSMMVNEGLFEISNVFEVPDNAIEVRFTRNQTIGKSFLGSKKRRIKRSMARAELLDVGTSLPVTNEERIVDSFHRIPISSGSSGEDYILFVQKEFVSERGAVNFNSYGLATNQERKGTVPELRF
>NZ_CP034298.1|WP_140271711.1|1030825_1031857_+|type-I-F-CRISPR-associated-protein-Csy3
MELCTQLNYVRSLSAGKAYFYYLSKSGEMCPLEIDRTRLRAPKGGYAEAYKGGKFVEKNVAPQDLAYSNPQFIEECYVKPGVDDIYCAFPLRIRANSLTPDTCSDDEVRSKLSLLAKTYQEINGYQELALRYAKNILLGTWLWRNRECRRLSIEVTTSDSQTLIVENATRLSWYGHWDEASAECLEKLTAYLMRALSDPTEYFYMDVKAKIGVGWGDEVYPSQEFLDDREDGAPTKQLATVELLNGKETAAFHGQKIGAALQSIDDWWHEEADKPLRVNEYGADREYVIARRHVSYGNDFYQLVRNTENWIETMTASQTIPNDVHFIMSVLSKGGLFNCSKAK
>NZ_CP034298.1|WP_114867347.1|1028731_1030819_+|hypothetical-protein
MTKLSDLLAIEDEAVKQITLKKVFMPYTEDVCVEGFEKEALTILLNLSSSHQSDRCSDWLDVARAKRHLKAAENLEASLDEIKWFHTHNLKFPDCRVKDQRIVARPLTTTEVFISSGVLEQRLGWAHNSAVYRHTLWLLNPFNWQSQSVCILSLIQQESPVWVELLKEFGLGAKSLARLKHTIEEQLLDNHFPDSVSPYSKQLRFPWGDDYVSVTPVVSHAIQSELEVRSRSRESKLRFMSSSLPNSASIGNLCGSLGGNMKALNYPLEVKPSKGGTLTESRKKSGHYFDDYQVTNAKICQVLNHLIGSEPSKTQKQRESARKVRSKILRKQIALWMLPLIELRDIVDADLNQQRLKHDDTLAQAFLVLPESDLGSLASEFNRRLHLTLQNNKYTAKFAYHPMLMQLVKAQIVWILQQLSKPSGHEDKVTGEQYIYLSSMKVQDAVAMSSPYLCGALSLTAIWGFMHRYQREFNKLVNSISLFEFSSFSFYVRSENIQSTAKLTEPNSVAKARTVSNAKRPTIRSERLADLEIDLVIRVHSESRISDFKAALKTALPVAFAGGALYQPQLSTQIEWLRTFTSRSELFHVIKGLPAYGRWLYPSENQPSDFDDLEHLITKDADNLPVSIGYHLLERPTKRCNSITDRHAYAENAIGLAKKVNPIEVRFSGRDHFFNHAFWSIECSSETILIKNYRD
>NZ_CP034298.1|WP_114867346.1|1027517_1028729_+|hypothetical-protein
METDIQLYPDESLESFLLRLSQEQGYERFFHFAEDIWFDTMEQHEAIAGAFPLELNRVNIYHAQTTSQMRVRVLIHLENQLKLINFGVLRLALSHSKAQFSPQYKAVHRFGVDYPYAFLRKRFTPICPLCIDEAPYIRQQWQFISHQVCEHHGCKLVHHCPECKSRLEYQSTDSINQCECGFELRNSPVEDAPEAEVLVARWLSGNDSKPLGLLTGEMTLSERYGFLLWYVNRYGDIDDLSFESFVEYCCAWPTELWQDLDTLKEKAELVRVKDWKKMFFNEAFGALLKDCRQLPSRQLSHNTVLTQVLAYFTQLMATVPSSAKGNIGDVLLSPFEASTLLSCTTDEVYRLYEFGEIKAAIRPRMHTKIASHESAFTLRSVIETKLTRMSSESDGLSVYLPEW
>NZ_CP034298.1|WP_159408348.1|1026477_1027374_+|hypothetical-protein
MIKLPLPSETHSVSLDSCLSDLPASKLAYKFRLSRAKTDLVKQSQAYSSKATSLDLHQFKASKRARPQDKVPFCGGEVSKGDLVDLYKGVFSKEGTASRAIYNRIKLSSHERCSICLVGEAETLDHYLPKARYPAFSVDPQNLIPACSKCNKGKGASLLSKKEEHVLHPYFSSSKYYEELWLKAEIVEETPVKVRFFVDPPVGWNADEVTLLENHFKEFGLAEKFALFVAHAVVTEIDTVDISLNRRDLRVEVIQEDFELKANNRPSINSPIAAMYRAMSESRWFCSEPRKHEENGYI
>NZ_CP034298.1|WP_114867344.1|1024892_1026485_+|ATP-binding-protein
MKFKMIPRNAFAPQKGVSTCYLEIDNWNDYSFITTFSLSLHDEKGDFHKIGNVRIGFVGQTVKTATYEKLDDVFEGGLPSDFFSLGMHKEYYEELYKLNDRLREKLLHALRDVVFSQKYLSIAEEQDVFGTALLRDTSMAAVKGKYSRLLAGLKELTPYDFAFVPLGDMFGGKQLEFNVIDDSMPSTNIHAIIGKNGTGKTTFLNNMVEAIINPTPDGSKVIDLDSYLEPKPQIGSDYFSSITSVSFSAFDTFTPPKEQPNPAKGTCYFYVGLKNPDKEGTLKTLDELREDLCESMLDCFYDPKQQKLARFKYVIELLEFDQNIKSLNLTKYHEEYVELIKEYPGFDEYKFRTICRERFLEILPPMSSGHAIVLLSTLNLIATVDDKSLVLIDEPESHLHPPLLAAYIRALSWLLNQVNGVSIIATHSPVVLQEIPKNCVWKVIRSETETTVSRPVRETFGENVGILTREAFGLDVEKSGFITVLDNAVKSGGTFEHIYHNTFGGCIGAEGVTLLRILVDIRDRENAKND
>NZ_CP034298.1|WP_114867956.1|1023383_1024250_-|GIY-YIG-nuclease-family-protein
MTRGTQLKIYLANGSVTGIRHAEIVNWTGQAIAVPRVHIKELSVWEETQRPGVYFLFGYDADSGNNLVYVGEAEHIQKRLSQHLAGKEFWNEAICFTNKDENLTKAHVKYLEARLIEIILESKRYDLDNDKQPPTSSLPRGERDAMETFIDNIRTVIGSLGHKLLEPRVSQPASPQTNEQENTVLQLKVKKVDAKAMLTDEGIVVLKGSQALTIAQPSLSKGYTKLRSSLEDKGVLTPSGDRLVAAEDILFTSASQAAAVLLGYPCSGPDYWRDSSGKTLKEIEAESV
>NZ_CP034298.1|WP_114867343.1|1022004_1023387_+|DEAD/DEAH-box-helicase-family-protein
MLRTWQAECVELAINKFSSNRRPHFFCQATPGAGKTVMAAEVAKRLFQEGMIDLVLCFSPSLSVAEGMKKTFSWKLECSFNGGLGSLGGSYTYQSIRFLDENFWNTVSKYRVLVVFDEIHHCSFDDEGRSNSWGQEIVSKIQGFARYTLALSGTPWRSDRLPIVMAEYSDPDGKVVCDYHYGLQQAVVDKVCRRPKIVLIDNEHLSVNAGRDNQHFASILDCLKQSDVSYHSVIHNEDAMNYILNSGCQKLAQIRQESPNAGGLVVAASIKHAKHIQKRLIEHFHQSACIVTYHHDNPLNEIESFRHSNVQWIVSVGMISEGTDIPRLQVCCHMSSVKTELYFRQVLGRILRVNDSPNQEAWLYTFAEESLIGFAERIEQDIPDSCLYIKQENNVPSAIDEKHLPPSTVSESIQSDRPQPSLLNWGEASDVINSNNVGLTLAMDELRLGQFKQRVIAAFT
>NZ_CP034298.1|WP_114867342.1|1021465_1022011_+|hypothetical-protein
MKKVNRINPDMFNLLIEKGMDDFSVIEARDALLNGTSTFTSSDEARKYVYKQLLSLEEKGWLSVIGTRRGKRYHQTNEFKALIIEPRAARNKKAKVDSITVQTPELSLNALEQEKKQHEGELAITLGEIEEYQSLLTRFPNNKHDMEPLFNAARERSAKLLGKINALTNWMQVAQSKASQC
>NZ_CP034298.1|WP_039483175.1|1021049_1021364_-|helix-turn-helix-transcriptional-regulator
MQKDNPIPARLKAARKKAKITQKDLGVKIGMEPSSASGRMNHYEKGRHVPDIGTLERMAEELDVPLNYFFCRNELSAELACAIEKMSDDEKKALLENLNGESHL
>NZ_CP034298.1|WP_114867348.1|1033193_1034270_+|SUMF1/EgtB/PvdO-family-nonheme-iron-enzyme
MKNRWLGMACVLPLLVACNSESSAIKVSSETVSQKQIDTIVSNINELYPEATPDQKQKAAEVVVRAIENMVFVEGGSFDMGDFKMDCDFPTKTENRLDWSQDAQCFNFATNLSGAQHLHKVTLDSYSISKYETSFLDMEWMRQINGLPVALTNFISVIPLKTKPMERTDEKYKKAIEYNLKNNEAAYTKSWQEAKDYCQWLGKVSTLEFDIPTEAQWEFAARSRGQHYYYATNDGYRSLTEGQYFDPDMGKYIDILPSEVNSSTSSEEYIGQWPANPLGIYGMSNGIQEWVNDWYAKEYYLNSPEHNPQGPENGIQKVVRDGGGVKTFDRFGKDPVLDAYSPTHSFRCTIHDSKPISK
>NZ_CP034298.1|WP_114867349.1|1034293_1036855_-|LysM-peptidoglycan-binding-domain-containing-protein
MSNKTYVIKPGDTLIGIGIEQSVNFNILLELNPKYQPNPDLIQVGDTLILPSQEEEEPIPVEFPVEPIAKMCPKEKGTIVAAPLCEPKEIEDIIFATGESANRFYCLTKESVEKLDKEIEETTKLFQCYSDLVHQAPTGKETWAELEKHTQKREALCADLIYAGILPDPSRKNPASVKAEQSRKEKVEREKALENQRMANAKVTELKKRIRYIEEYSNWFGSEDSAIELKERLTATVVPNLKKELATWEKMAKVPPTKESSSGKPVDAKKMAVKERALDGIVTNTGVRELYSINRGVYTYVREAFFQEETTVRNSWRNTSNTNNANRALRTGNIKEFGKAIADDIKSDLEQKKLGPDIKANLAKWQAPGGKIAEWKSTDTLLRDDEGNTMFAVSSEAQLGRWGMQAAVDAELNPFEKDEHGNAKGNVDLGVGASAGFSAFEAAITAEVFLPSDAGYTPCLNYTDANGQPALHSFGSFRFNAKMKVGCFVGVVAQAKAGISNRRPETGDDVGILFDPHVSMGNAGGGQIGIKASVFGGGQLSGEFAGGVQWKAPEIDQTTNFNSLAEIQTEGNVSVGGGYNADFELYLRGGQFFLKLSAKLVWGAGGGGGFAVAINAQEIWNLAKVIWQGLQYVDYRMLKNINNQAYEYLVDAAYFAFAAADIIKSPDDALKMTVTAGKASIDFIKAERKKYLALEKEAAVLSDRILNTSTRSGVPFDQLPPEAIGRMLDTLTRTFLLNWEEKQEDAICTLLSQSTYSWHKFEEILARMNEKGEKERGEDTLFDNIQRLNAILDGSQQREFNRWVASLAEKNLSKEVANAPFAPYKGKAFARKLAHVNQQYASIYGGSTPNQYV
>NZ_CP034298.1|WP_114867350.1|1036867_1037461_-|DUF4123-domain-containing-protein
MSNTQLNPNWRIQGNAQPNLITNQQAYAIIEPLLWPEWKKKLEAHLESFEVIPLMAGTRLSHLNEGPVLVSIGSSEEALQACVAKMSQTPCGCLVWSSPTHSSSEVAASLRQRLFVSRNQGEALFRFYEPRTLVPLMAALSDEERRHMFPLLSSLHWHSKQWLSINLSHASEATTSIQPWTLSQEQLSTMQNIAQQW
>NZ_CP034298.1|WP_159408349.1|1037442_1039701_-|type-VI-secretion-system-tip-protein-VgrG
MVNDVNFTFDVSSFSGAFKVESFRVTETVSSPFEMNLTVLSDDDAITFDMLSRKMGVLSLFGQGVGAARQFNGSISELRYLGSGRRFSRYHITLVPHLWFLTQRQDCRIFQMQAAPDIIRQVFDDAGMSDYRFELSAQYEAKEYVLQYRENDQHFVQRLMAEHGLWYYFEHNEAGHTMVIVDSNDAIPELISSPTNASYLGPVIYHAQGGGAPDREHIFDLEQIHRTRTGLVSYSDYNYLTPKIPQGTSADEGPNFDLQRYDYLGRYTTPELGQQRATEWMSEYTVDSHQVEAASDIMRLTAGYSFDISQHPRSNINRDYLMLTVMHTGFNPRVHEEESSDEPTNYHNQFICLPRDVTFRAPKMASPVVDGPQTAVVVGPAGEEIYTDEYGRIKVQFHWDRYAQSDEHSSCWLRVSQSMAAPNWGAVYLPRIGHEVIVTFLEGDPDRPLVTGAVYNGLHTPPYPLPENKTRTVFRTQSHKAEGYNEMYFEDESDQEEVHFRAQKDMKTKVLNNRYRDIGNDEELKVGNNQENNILGDRKEVIDGHKTSITKQTFMEQVEEDVHVTYNANESEKIANNRDLYIDENRQTLIGKDDSLDVGQDQNTVIMASRSIDVGADDTHSIGNNLSVEVNGNTSIRSDGETAVVSADEIKVLVGASSLVLKSSGNIHLNGTSITIDGASSVTATGGKVDINPGGAANGNSSVSTRRPKGLSIAKKTPPVMSPAAYKGFVEDGGLMQELCDCGSGKTCQIHS
>NZ_CP034298.1|WP_114867351.1|1040115_1040943_+|restriction-endonuclease
MARKSDGIIWHLMDAPWWLSVILSIGVYVALSYVLPELAASSNNFVFNAIAPNLSMFAPYFALLFFIPAPIAFFKQFQRRQMYRTTTSHIRSKQVTTPFHQLSWLEFESYVGEYFKHQGYAVKQSFSQKPDGGIDIWLTKDGELSLVQCKHWKAKKVGIQVLREMYGVMIEHHASKMIIVTSGDFTSEAIAYAQDKRLWLVNGSELVHIIEDGRSFENKPPKPTSDMKLVPKVCPNCQSVLVKRVAKRGVNKGKAFYGCTSFPTCRYTIDYSKPN
>NZ_CP034298.1|WP_114867352.1|1041225_1041711_-|hypothetical-protein
MGKLNDAQLQRRIEHILERHPNASSLVVRQRLMSNLKPSHIYPHLVPFYEQYRIDDSADIQRELKKMMSMHLGLSIIAQTLSIGCFNYRQVEKALLELTADFDHLAQAQRCKELRFGHGAPTDEHHQSQIVMTLQRLGHRLPDIWQVLRQATESNKIAKPR
>NZ_CP034298.1|WP_114867353.1|1041836_1042079_+|hypothetical-protein
MPCKPIDNKLLIEHLNALLSHTRDSRTATPDVSALLPFVRDVVLEEVVIHCRGNQAKASRILGLNRGTLRTHMCRIQRQK
>NZ_CP034298.1|WP_114867354.1|1042319_1042562_+|DUF2384-domain-containing-protein
MDIDILLSITSDASNECSTALVEMLDEADTYFGDRESTITWLSKPNVAFKLKSPISICDDMEGIQLVMEQINRLKFGYLA
>NZ_CP034298.1|WP_159408350.1|1042672_1042810_+|hypothetical-protein
MDIAYQSTTEYSSAVVAKSTTTATDPIVQKVVAQLRLNQKCPKTV
>NZ_CP034298.1|WP_114867355.1|1042958_1043999_+|SMEK-domain-containing-protein
MITRGHLIGEIVDGLTSISQQVSTRCQLGLTDLNRYLEDFFKDYLNEALSLSLVNLNDERSNEPGLDLGDEISSVAFQVTSTKTAQKVNKTLKTTSKRKKQFAEINVLVIGKKQASYQLDQSLALNFGFTEENIWDVDDLCRKTISLPLDRLQALYELVRRNLARVRVELEIPDEDGNFSTSIDSYIEKIPTPKMSDFKKYHAYQKSRVDEFEHTTEEVEEHFREFSRELSQLPRITREFYAFLLERREKDDNRIPSRSFYSENLWFNYNKLKRVCRFPDLDDEVVLLGEHGFADIEEPMEHNESPFVRIFAPIKVDGFIHELVEYIESKDIGFKKPIVFLDFSAF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP034298_1	1.3\|1032749\|31\|NZ_CP034298\|CRISPRCasFinder,CRT	1032749-1032779	31	MN812211	Flavobacterium phage vB_FspS_laban6-1, complete genome	21794-21824	8	0.742
NZ_CP034298_1	1.3\|1032749\|31\|NZ_CP034298\|CRISPRCasFinder,CRT	1032749-1032779	31	NZ_AP019552	Athalassotoga saccharophila strain NAS-01 plasmid pATS1, complete sequence	14984-15014	9	0.71
NZ_CP034298_1	1.3\|1032749\|31\|NZ_CP034298\|CRISPRCasFinder,CRT	1032749-1032779	31	MN582093	Podoviridae sp. ctviO18, complete genome	9904-9934	10	0.677

1. spacer 1.3|1032749|31|NZ_CP034298|CRISPRCasFinder,CRT matches to MN812211 (Flavobacterium phage vB_FspS_laban6-1, complete genome) position: , mismatch: 8, identity: 0.742

tcgtgaaatagaacattttgaacaaaagtct	CRISPR spacer
tattgaaatagaaaatattgaacaaaaagaa	Protospacer
*  ********** ** **********.

2. spacer 1.3|1032749|31|NZ_CP034298|CRISPRCasFinder,CRT matches to NZ_AP019552 (Athalassotoga saccharophila strain NAS-01 plasmid pATS1, complete sequence) position: , mismatch: 9, identity: 0.71

tcgtgaaatagaacattttgaacaaaagtct	CRISPR spacer
ggcacaaatagaaaattttgaaaaaaagtta	Protospacer
     ******** ******** ******.

3. spacer 1.3|1032749|31|NZ_CP034298|CRISPRCasFinder,CRT matches to MN582093 (Podoviridae sp. ctviO18, complete genome) position: , mismatch: 10, identity: 0.677

tcgtgaaatagaacattttgaacaaaagtct	CRISPR spacer
aggtgaaatagaaaatcttgaacaactaata	Protospacer
  *********** **.********  . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

730786 : 737488

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005483011.1\|730786_731926_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.3e-62	41.7
WP_114867308.1\|731943_733194_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.1e-98	47.9
WP_005482986.1\|733321_733771_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_062851259.1\|733778_734903_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.8e-48	36.0
WP_005483039.1\|734915_735569_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.6e-33	37.5
WP_005496254.1\|735738_736848_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.5e-63	39.6
WP_005440184.1\|737017_737488_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.7e-32	49.3

DBSCAN-SWA_2

1203092 : 1212906

Mycobacterium_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159408356.1\|1203092_1206179_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	3.8e-88	49.9
WP_005460060.1\|1206253_1206880_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_005495763.1\|1206886_1208236_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.1e-84	42.1
WP_005495761.1\|1208327_1209635_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.2e-90	42.8
WP_029816223.1\|1209837_1210737_+	DUF3380 domain-containing protein	K4RM41	Pseudomonas_phage	1.3e-36	43.5
WP_063517347.1\|1211289_1211556_+	DksA/TraR family C4-type zinc finger protein	A0A1S6UBD1	Serratia_phage	6.2e-16	46.6
WP_114867381.1\|1211625_1212906_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	A0A1V0SKB7	Klosneuvirus	4.3e-22	26.7

DBSCAN-SWA_3

1690834 : 1700721

Vibrio_phage(90.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_053314082.1\|1690834_1692565_+	response regulator	A0A1V0SGX0	Hokovirus	1.7e-42	31.0
WP_159408368.1\|1692732_1693101_-	hypothetical protein	A0A1W6UGD7	Vibrio_phage	2.0e-36	65.5
WP_025441866.1\|1693287_1693560_+	hypothetical protein	NA	NA	NA	NA
WP_025441867.1\|1693559_1693784_+	hypothetical protein	G8IRU4	Vibrio_phage	9.2e-13	56.1
WP_029803951.1\|1693776_1695033_+	replication protein	G8IRU5	Vibrio_phage	5.0e-148	62.0
WP_029803952.1\|1695038_1695365_+	hypothetical protein	G8IRU6	Vibrio_phage	2.1e-18	48.5
WP_005376279.1\|1695361_1695607_+	hypothetical protein	R9TMT7	Vibrio_phage	4.8e-07	43.9
WP_159408369.1\|1695635_1695827_+	hypothetical protein	G8IRU8	Vibrio_phage	3.8e-07	54.8
WP_159408370.1\|1695961_1697467_+	chemotaxis protein	NA	NA	NA	NA
WP_025441873.1\|1697466_1697799_+	DUF2523 domain-containing protein	Q64EV1	Vibrio_phage	1.4e-17	36.4
WP_159408371.1\|1697802_1699227_+	toxin	Q64EV0	Vibrio_phage	9.7e-124	51.9
WP_025788703.1\|1699238_1699517_+	hypothetical protein	NA	NA	NA	NA
WP_159408372.1\|1699850_1700315_-	hypothetical protein	NA	NA	NA	NA
WP_025441877.1\|1700346_1700721_-	phage protein	A0A1W6UG37	Vibrio_phage	2.3e-61	92.7

DBSCAN-SWA_4

1711107 : 1782919

Vibrio_phage(54.84%)

head,portal,terminase,coat,capsid,tail,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029815171.1\|1711107_1712925_-	replication endonuclease	A0A2P1CKY6	Pseudoalteromonas_phage	1.0e-64	34.9
WP_005479376.1\|1712937_1713234_-	hypothetical protein	NA	NA	NA	NA
WP_005482072.1\|1713230_1713422_-	hypothetical protein	NA	NA	NA	NA
WP_005388732.1\|1713564_1713831_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_025638643.1\|1713839_1714208_-	antirepressor	Q9MCC3	Vibrio_phage	4.2e-55	90.7
WP_042765520.1\|1714331_1714604_+	hypothetical protein	NA	NA	NA	NA
WP_025526117.1\|1714606_1714822_+	hypothetical protein	A0A1W6UGD1	Vibrio_phage	4.5e-33	97.2
WP_015975179.1\|1714745_1715954_+	DNA replication initiation protein	Q7DKP2	Vibrio_phage	3.2e-245	100.0
WP_015975173.1\|1715957_1716311_+	DUF1293 domain-containing protein	O88148	Vibrio_phage	2.9e-61	100.0
WP_015975174.1\|1716322_1716568_+	hypothetical protein	A0A1W6UH23	Vibrio_phage	1.2e-37	100.0
WP_015975175.1\|1716578_1716812_+\|coat	major coat protein	O88142	Vibrio_phage	1.0e-30	100.0
WP_114867556.1\|1716943_1718473_+	methyl-accepting chemotaxis protein	O88107	Vibrio_phage	1.6e-153	93.5
WP_017822026.1\|1718474_1718789_+	DUF2523 domain-containing protein	A0A1W6UG81	Vibrio_phage	6.1e-47	100.0
WP_114867557.1\|1718785_1719928_+	assembly protein	A0A1W6UG53	Vibrio_phage	1.0e-208	98.7
WP_114867558.1\|1720342_1721371_+	hypothetical protein	NA	NA	NA	NA
WP_159408373.1\|1721406_1722003_+	hypothetical protein	NA	NA	NA	NA
WP_114867966.1\|1722223_1722589_-	phage protein	Q9MCC4	Vibrio_phage	1.5e-60	92.6
WP_114867560.1\|1722837_1723212_-	hypothetical protein	NA	NA	NA	NA
WP_005494983.1\|1723273_1723585_-	DUF3634 family protein	NA	NA	NA	NA
WP_005494981.1\|1723595_1724045_-	macrodomain Ter protein MatP	NA	NA	NA	NA
WP_159408374.1\|1724255_1725893_+	AAA family ATPase	NA	NA	NA	NA
WP_042780182.1\|1725963_1726482_+	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA
WP_005494976.1\|1726596_1726770_-	ribosome modulation factor	NA	NA	NA	NA
WP_025551140.1\|1726940_1728719_-	DUF3466 family protein	NA	NA	NA	NA
WP_005488209.1\|1728726_1730646_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	3.2e-53	29.0
WP_011105882.1\|1730623_1730866_-	glutaredoxin family protein	NA	NA	NA	NA
WP_114867561.1\|1730894_1733018_-	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA
WP_100550175.1\|1733030_1733123_-	hypothetical protein	NA	NA	NA	NA
WP_005494967.1\|1733514_1734057_-	cell division protein ZapC	NA	NA	NA	NA
WP_005458264.1\|1734225_1735236_-	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA
WP_005458266.1\|1735544_1740386_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA
WP_114867562.1\|1740587_1740806_-	DUF2835 domain-containing protein	NA	NA	NA	NA
WP_159408375.1\|1740871_1743499_-	aminopeptidase N	NA	NA	NA	NA
WP_029848917.1\|1743570_1743807_-	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_065870669.1\|1744781_1745297_+	hypothetical protein	NA	NA	NA	NA
WP_159408376.1\|1745293_1746049_+	hypothetical protein	NA	NA	NA	NA
WP_159408377.1\|1746103_1746577_-	hypothetical protein	NA	NA	NA	NA
WP_159408378.1\|1746709_1747162_-	hypothetical protein	NA	NA	NA	NA
WP_149192343.1\|1747185_1747461_-	hypothetical protein	NA	NA	NA	NA
WP_097371869.1\|1747591_1747957_-	peptidase M15	A0A2I7RAT1	Vibrio_phage	1.1e-34	62.8
WP_159408379.1\|1747965_1748496_-	hypothetical protein	NA	NA	NA	NA
WP_159408380.1\|1748495_1749503_-	radical SAM protein	NA	NA	NA	NA
WP_029848922.1\|1749518_1749893_-	hypothetical protein	A0A0H5BIA0	Pseudomonas_phage	6.3e-06	54.0
WP_005490225.1\|1756106_1756505_-	hypothetical protein	NA	NA	NA	NA
WP_005490060.1\|1756507_1757047_-	hypothetical protein	M4MD40	Vibrio_phage	9.9e-21	36.8
WP_029860508.1\|1757058_1757640_-	hypothetical protein	NA	NA	NA	NA
WP_159408381.1\|1757651_1759946_-\|tail	phage tail tape measure protein	A0A1J0GVM4	Pseudoalteromonas_phage	4.7e-11	23.8
WP_005490199.1\|1759961_1760255_-	hypothetical protein	NA	NA	NA	NA
WP_005490240.1\|1760299_1760635_-	hypothetical protein	NA	NA	NA	NA
WP_005490045.1\|1760701_1761157_-	hypothetical protein	NA	NA	NA	NA
WP_005490113.1\|1761169_1761493_-	hypothetical protein	NA	NA	NA	NA
WP_065870680.1\|1761540_1762149_-	hypothetical protein	NA	NA	NA	NA
WP_029848884.1\|1762141_1762486_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_005490067.1\|1762498_1763047_-\|head,tail	phage gp6-like head-tail connector protein	A0A2I7S7I1	Vibrio_phage	1.2e-08	26.6
WP_005490214.1\|1763062_1764253_-\|capsid	phage major capsid protein	A0A2I7S7N4	Vibrio_phage	1.8e-38	31.2
WP_159408382.1\|1764347_1765196_-\|head,protease	HK97 family phage prohead protease	A0A2I7S7P2	Vibrio_phage	2.7e-28	35.5
WP_065870682.1\|1765158_1766484_-\|portal	phage portal protein	M4MHV5	Vibrio_phage	3.1e-76	38.8
WP_023667246.1\|1766493_1768254_-\|terminase	terminase large subunit	A0A0K1LKI4	Staphylococcus_phage	1.1e-81	35.9
WP_029860027.1\|1768377_1768572_-	hypothetical protein	NA	NA	NA	NA
WP_029848887.1\|1768581_1769016_-	hypothetical protein	NA	NA	NA	NA
WP_079380216.1\|1769158_1769569_-\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	7.6e-05	27.6
WP_159408383.1\|1769651_1770215_-	hypothetical protein	NA	NA	NA	NA
WP_005490181.1\|1770472_1770664_-	hypothetical protein	NA	NA	NA	NA
WP_005490147.1\|1770873_1771518_+	antirestriction protein	G0YPX7	Erwinia_phage	1.7e-11	31.4
WP_005490250.1\|1771573_1771786_+	hypothetical protein	NA	NA	NA	NA
WP_005490178.1\|1772011_1772281_+	hypothetical protein	NA	NA	NA	NA
WP_159408384.1\|1772903_1773317_-	hypothetical protein	A0A0S2GLI5	Bacillus_phage	6.5e-12	33.9
WP_005490042.1\|1773363_1773546_-	hypothetical protein	NA	NA	NA	NA
WP_005490248.1\|1773584_1773848_-	hypothetical protein	NA	NA	NA	NA
WP_005490196.1\|1773943_1774531_-	deoxynucleoside kinase	A0A1V0S992	Catovirus	5.6e-09	28.9
WP_159408385.1\|1774530_1774818_-	hypothetical protein	NA	NA	NA	NA
WP_100084493.1\|1774817_1775015_-	hypothetical protein	NA	NA	NA	NA
WP_005490089.1\|1775022_1775616_-	deoxynucleoside kinase	A0A249Y6S3	Cherax_quadricarinatus_iridovirus	2.5e-09	28.9
WP_029848890.1\|1775750_1776023_-	hypothetical protein	NA	NA	NA	NA
WP_029848891.1\|1776019_1776307_-	hypothetical protein	A0A142K9B6	Gordonia_phage	1.8e-08	53.7
WP_005490210.1\|1776510_1776732_-	hypothetical protein	NA	NA	NA	NA
WP_029860035.1\|1776719_1777562_-	exonuclease	F1D0G7	Vibrio_phage	6.7e-56	42.8
WP_023667239.1\|1777571_1777859_-	hypothetical protein	NA	NA	NA	NA
WP_140054511.1\|1777901_1778126_-	hypothetical protein	NA	NA	NA	NA
WP_005490208.1\|1778133_1778331_-	DUF1382 family protein	NA	NA	NA	NA
WP_005490066.1\|1778496_1778928_-	tellurite resistance protein	Q1MVI3	Enterobacteria_phage	7.2e-30	47.9
WP_159408386.1\|1779224_1781276_-	DNA polymerase	A0A0F7DD46	Delftia_phage	1.0e-142	40.5
WP_159408387.1\|1781275_1782919_-	toprim domain-containing protein	L7TLT7	Rhizobium_phage	1.8e-121	48.5

DBSCAN-SWA_5

2870077 : 2887469

uncultured_Mediterranean_phage(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005455546.1\|2870077_2872660_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	1.0e-78	37.9
WP_114867838.1\|2872802_2873270_-	recombination regulator RecX	NA	NA	NA	NA
WP_025789425.1\|2873393_2874434_-	recombinase RecA	A0A2D1GPX2	Mycobacterium_phage	8.1e-112	60.7
WP_021450025.1\|2874634_2875117_-	nicotinamide-nucleotide amidase	B5TK85	Pseudomonas_phage	2.9e-27	48.7
WP_025610927.1\|2875201_2877763_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	4.4e-34	23.9
WP_069540980.1\|2878911_2879835_-	peptidoglycan DD-metalloendopeptidase family protein	D7RWE0	Brochothrix_phage	4.1e-06	35.2
WP_005455562.1\|2879849_2880476_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.3e-35	52.1
WP_017449149.1\|2880475_2881252_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.0e-66	52.4
WP_021450029.1\|2881251_2882295_-\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_005380896.1\|2882341_2882818_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_005478544.1\|2882835_2883540_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	A0A2H4UTB4	Bodo_saltans_virus	5.9e-05	23.6
WP_005455577.1\|2883541_2883823_-	cell division protein FtsB	NA	NA	NA	NA
WP_005455579.1\|2884448_2885750_-	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.2e-134	59.2
WP_005455581.1\|2885828_2887469_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	4.2e-155	52.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP034299

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP034299_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP034299_1

565998-566095

Orphan

Consensus_repeat	Method
TTTTTGAAAAGGCGTTTTAAAAATA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP034299_1

>merge|NZ_CP034299|1|565998-566095|CRISPRCasFinder
TTTTTGAAAAGGCGTTTTAAAAATATTGATTGCGATCTTGTTTTTCTGGATTCTTTAATTGCGCGGTTTCAAATTTTTGAAAAGGCATTTTAAAAATA

>NZ_CP034299|1|1|565998-566095|CRISPRCasFinder
TTTTTGAAAAGGCGTTTTAAAAATA	TTGATTGCGATCTTGTTTTTCTGGATTCTTTAATTGCGCGGTTTCAAA
TTTTTGAAAAGGCATTTTAAAAATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP034299.1\|WP_025501296.1\|564593_565118_-\|YgjV-family-protein	unknown	unknown	gnl\|CDD\|378474
NZ_CP034299.1\|WP_005460834.1\|560937_561561_-\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|235577
NZ_CP034299.1\|WP_006740949.1\|570551_571358_-\|arylamine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366312
NZ_CP034299.1\|WP_031776724.1\|575708_576113_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034299.1\|WP_005482833.1\|574146_574608_+\|oxidoreductase	unknown	unknown	gnl\|CDD\|226429
NZ_CP034299.1\|WP_069539386.1\|567019_568888_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225457
NZ_CP034299.1\|WP_114868010.1\|562600_563512_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP034299.1\|WP_005460779.1\|563589_564225_-\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|181746
NZ_CP034299.1\|WP_025628843.1\|555973_558202_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP034299.1\|WP_005464962.1\|571651_572800_+\|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176260
NZ_CP034299.1\|WP_005464972.1\|569601_570471_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176159
NZ_CP034299.1\|WP_005482845.1\|558217_558895_-\|porin	unknown	unknown	gnl\|CDD\|368776
NZ_CP034299.1\|WP_005467181.1\|564265_564586_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380366
NZ_CP034299.1\|WP_005482884.1\|561572_562502_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP034299.1\|WP_159408442.1\|559024_560764_+\|transporter	unknown	unknown	gnl\|CDD\|271371
NZ_CP034299.1\|WP_005464966.1\|572861_573701_+\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|178061
NZ_CP034299.1\|WP_005482916.1\|565136_565898_-\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	unknown	unknown	gnl\|CDD\|181605
NZ_CP034299.1\|WP_080254346.1\|566138_566936_+\|DNA-binding-transcriptional-regulator-KdgR	unknown	unknown	gnl\|CDD\|185046
NZ_CP034299.1\|WP_114868009.1\|568890_569601_+\|DNA-polymerase-III-subunit-epsilon	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236392
NZ_CP034299.1\|WP_005464959.1\|574607_575699_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635

Protein	Function_ID	Function_description	E-value
NZ_CP034299.1\|WP_025501296.1\|564593_565118_-\|YgjV-family-protein	gnl\|CDD\|378474	pfam10688, Imp-YgjV, Bacterial inner membrane protein. This is a family of inner membrane proteins. Many of the members are YgjV protein.	9.26013e-50
NZ_CP034299.1\|WP_005460834.1\|560937_561561_-\|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase	gnl\|CDD\|235577	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional.	4.28455e-121
NZ_CP034299.1\|WP_006740949.1\|570551_571358_-\|arylamine-N-acetyltransferase	gnl\|CDD\|366312	pfam00797, Acetyltransf_2, N-acetyltransferase. Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30kDa. It facilitates the transfer of an acetyl group from Acetyl Coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (M. tuberculosis, M. smegmatis etc) to man. It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat Tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid.	1.88138e-97
NZ_CP034299.1\|WP_005482833.1\|574146_574608_+\|oxidoreductase	gnl\|CDD\|226429	COG3915, COG3915, Uncharacterized protein conserved in bacteria [Function unknown].	3.9997e-40
NZ_CP034299.1\|WP_069539386.1\|567019_568888_+\|CBS-domain-containing-protein	gnl\|CDD\|225457	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].	2.87776e-139
NZ_CP034299.1\|WP_114868010.1\|562600_563512_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	2.34686e-18
NZ_CP034299.1\|WP_005460779.1\|563589_564225_-\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	gnl\|CDD\|181746	PRK09273, PRK09273, hypothetical protein; Provisional.	2.15977e-144
NZ_CP034299.1\|WP_005464962.1\|571651_572800_+\|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase	gnl\|CDD\|176260	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding.	0
NZ_CP034299.1\|WP_005464972.1\|569601_570471_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176159	cd08470, PBP2_CrgA_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding domain. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 1. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.14139e-108
NZ_CP034299.1\|WP_005482845.1\|558217_558895_-\|porin	gnl\|CDD\|368776	pfam06178, KdgM, Oligogalacturonate-specific porin protein (KdgM). This family consists of several bacterial proteins which are homologous to the oligogalacturonate-specific porin protein KdgM from Erwinia chrysanthemi. The phytopathogenic Gram-negative bacteria Erwinia chrysanthemi secretes pectinases, which are able to degrade the pectic polymers of plant cell walls, and uses the degradation products as a carbon source for growth. KdgM is a major outer membrane protein, whose synthesis is strongly induced in the presence of pectic derivatives. KdgM behaves like a voltage-dependent porin that is slightly selective for anions and that exhibits fast block in the presence of trigalacturonate. In contrast to most porins, KdgM seems to be monomeric.	3.08357e-24
NZ_CP034299.1\|WP_005467181.1\|564265_564586_-\|cupin-domain-containing-protein	gnl\|CDD\|380366	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain. This family includes bacterial and archaeal pectin degradation protein KdgF that catalyzes the linearization of unsaturated uronates from both pectin and alginate, which are polysaccharides found in the cell walls of plants and brown algae, respectively, and represent an important source of carbon. These polysaccharides, mostly consisting of chains of uronates, can be metabolized by bacteria through a pathway of enzymatic steps to the key metabolite 2-keto-3-deoxygluconate (KDG). Pectin degradation is used by many plant-pathogenic bacteria during infection, and also, pectin and alginate can both represent abundant sources of carbohydrate for the production of biofuels. These proteins belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	1.13072e-54
NZ_CP034299.1\|WP_005482884.1\|561572_562502_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.15929e-102
NZ_CP034299.1\|WP_159408442.1\|559024_560764_+\|transporter	gnl\|CDD\|271371	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain. SLC5 (also called the sodium/glucose cotransporter family or solute sodium symporter family) is a family of proteins that co-transports Na+ with sugars, amino acids, inorganic ions or vitamins. Prokaryotic members of this family include Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. One member of the SLC5 family, human SGLT3, has been characterized as a glucose sensor and not a transporter. This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	1.83505e-107
NZ_CP034299.1\|WP_005464966.1\|572861_573701_+\|S-formylglutathione-hydrolase	gnl\|CDD\|178061	PLN02442, PLN02442, S-formylglutathione hydrolase.	5.2905e-143
NZ_CP034299.1\|WP_005482916.1\|565136_565898_-\|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD	gnl\|CDD\|181605	PRK08993, PRK08993, 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD.	0
NZ_CP034299.1\|WP_080254346.1\|566138_566936_+\|DNA-binding-transcriptional-regulator-KdgR	gnl\|CDD\|185046	PRK15090, PRK15090, DNA-binding transcriptional regulator KdgR; Provisional.	0
NZ_CP034299.1\|WP_114868009.1\|568890_569601_+\|DNA-polymerase-III-subunit-epsilon	gnl\|CDD\|236392	PRK09146, PRK09146, DNA polymerase III subunit epsilon; Validated.	3.79011e-39
NZ_CP034299.1\|WP_005464959.1\|574607_575699_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	5.06677e-44

>NZ_CP034299.1|WP_005482916.1|565136_565898_-|2-dehydro-3-deoxy-D-gluconate-5-dehydrogenase-KduD
MILDSFNLEGKVAIVTGCDTGLGQGMALGLAKAGCDIVGVNISEPTETIEKVEAEGRKFVDIRANLMKLDDIPTIVDRAVTELGRIDILVNNAGIIRRNDAIEFSEQDWDDVMNINVKSVFFMSQAVAKQFIAQGEGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWASHGINVNAIAPGYMATNNTAALRADEQRNKEIVDRIPAARWGTPEDLAGPCVFLASKAADYINGYTIAVDGGWLAR
>NZ_CP034299.1|WP_025501296.1|564593_565118_-|YgjV-family-protein
MVDTSILAQALGFISFGLGFSVFYQKNDRHLKILMLIFNLNHLLHFLLLGSMVSALSALLSALRTTTAIFVSSKRVAAVFIVISLVSGFWVAEQWRDLWPIIGTVIGTYSVFCLSGIRMRIGFLLGASCWLTNNILVGSIGGTLLEMTVIVMNLLTIYRLHRQQSESMINQSSY
>NZ_CP034299.1|WP_005467181.1|564265_564586_-|cupin-domain-containing-protein
MFVFNQDIPMEDLGEGISRKVLAHSDNMMSVEVHFEEGAIGAMHSHPHEQLTYVLSGEFEFTIGDEKKIVKTGDTMYKEPNIEHGCVCLKAGVLIDTFTPMRKDFV
>NZ_CP034299.1|WP_005460779.1|563589_564225_-|RpiB/LacA/LacB-family-sugar-phosphate-isomerase
MKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFNVGMTDENDHHLTYIHLGIMASILLNSKAVDFVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAFAKGFGWAGELNVRYIFEKAFTGKRGEGYPIERAAPQQANAAILNNVKSAVAKDVVEGLRAIDQELVKTAVGSTQFQECFFAHCQVPEIAEYVKSLLD
>NZ_CP034299.1|WP_114868010.1|562600_563512_-|alpha/beta-hydrolase
MHVAPITSLQTWFPEHLVLPLWSEPQIPSHLVQSYQERNPNELLPDRAVFEITHPEMVVFEPEQSNGMGILLMPGGGYQRVSVDKEGADSARVLNQAGFTVFVMTYRMPNEGHEFGAWTPLADAQRAMRLVRQLPLASHLSSIGVLGFSAGGHVAASLATSHALDIYPLQDEADRVSAKPDFCALMYPVISMNTDIAHMGSRAELLANLERESDLLRFSLEKQVTSDMPPCFLLHASDDTAVSVENSIVFWQALRQHEIATEMHLFEQGKHGFGIRDAQGLPVAAWPQLLSAWLQNLTEKARR
>NZ_CP034299.1|WP_005482884.1|561572_562502_-|sugar-kinase
MNPISRVAIIGECMVELKKHDGVLQQGFGGDTLNTAVYLSRLTKQHGVETSYVTGLGHDPFSREMLTAWREEGINTDMVYLSEDKLPGIYAIETAEDGERSFFYWRNDAAAKYWLRERALLSLVKDLCQHQMIYLSGISLAIISDDCRQMLIELLTMCRKEGVKIAFDNNFRPKLWPNIEQARDFYSKILSVTDMAFLTFDDEVMLWGDKHEDEAISRTKNFGVKEIIVKRGADDCFVVTQDQQHTVAALKVDAVVDTTAAGDSFSAGYLAKRILGGDVAESALAGHKVAGTVIQHRGAIIPSQAMPTI
>NZ_CP034299.1|WP_005460834.1|560937_561561_-|bifunctional-4-hydroxy-2-oxoglutarate-aldolase/2-dehydro-3-deoxy-phosphogluconate-aldolase
MKDLNQQLSEIKVVPVIAIKDAGKAVKLAQVLIENGLPCAEVTFRTEDAALAIKNMREAYPEMLIGAGTVLTSAQVDEAIDAGVDFIVSPGFNPTTVKYCQQRNVTIVPGVNNPSLVEQAMEMGLRTLKFFPAEPSGGVAMLKALSAVYPVKFMPTGGVSPSNVKDYLSISSVLACGGTWMVPGDLIDNEQWDELAKLVREVAGIIE
>NZ_CP034299.1|WP_159408442.1|559024_560764_+|transporter
MTLLDSMIVMIYLLFIGIAAWLFRRFSTSSNDFLEGGGTMMWWMAGATAFMTQFSAWTFTGAAAKAYEDGISVMFIFWGNALGFFVAAAFFARRYRRLRVETAMEVIRVRFGHTSEQLFTWLSFPLTLIACAIWMNGLASFFSAVFAIEMSTTILAMGVIVTLIAVSGGAWTVSVTNVIQLILLIAITLVIGYTALQRFDSPSEVFAHATPIYGEQIRMPSLFVMWATAMLLQQTMSNNHTLSCYRFLTTANDKDATKAAFVAGVLFVFAPVLWFMPAWFVAAQNIDLLAIYPALEQSANNAAYLYYIQHYMPQGLLGLVMVALVAATIAPLSSAHNRNAGIVVKSLYQVWFNPNATSRQQLMVGKIATIVSGVLATVTALLLASVESYSLFDMMIVFAAFIQMPINIPSLLALVSLKTPNWSGWATVMVGCAISLFMMFIFDVQWLSSSPLTPRESKDLSVVATLAVHLLVTGGFFLFTRVFYAKEPPSIQQSRTALAIQLATPISDEELSPINHKQGLYVGSITALAGMLLILAGVVLAGSSQSIFVAIGCIVLLFSLFLLQPTLHSKRAWQKQKTK
>NZ_CP034299.1|WP_005482845.1|558217_558895_-|porin
MKVRYLTSALLLAMTSGLAAAASVDIRHEYVPDRDGDEHRDRIYVSHRFDNQIGFSVEAKWNYKDGHMGNAGHETGVSYRWKATDNFSLTPGINIDASPSGASVFKYNLTGAYKINDEWDVAARIRHGYKNTDDSRYNQLNLYANRKFEWGKLGVEAEYKDIHGGEGGWKDKGHDQLIDFKGEYTKLESGVIPFFAIAAITHKGDGSEFKDEYVPRFRVGLKYNF
>NZ_CP034299.1|WP_025628843.1|555973_558202_-|hypothetical-protein
MKKHTLALCLAAILAPAAHAAEIKVEDLTWKAITFGQSTDMNFGSTILPEKVGVNQVTVNGDAVAAGKLASTFTIESRGGKLANSHEGLTFYYTELPTDVNFTLSADVVLEQLGPETGATPNRQEGAGLMVRDILGAERLVPQPEGHEEFPSASNMVMNLMRSHTRTNDGMTNINASFREGVYQPWGTPGNRLSRVDYVEGVPYGTAETYRMTLTRTNDGFKVSYRNGEKFVEQAVKGANANIVEMQNSDSQYVGFFASRNAKMTVSNVDLQLAAADTVDAPKYAAKQGELVFQIASSPRSATKEYPVQARANYSGEFEVLHNDKVVAKQTVTAGELFSQWLTLDSGANQMEVRFTAIDGPNKETQAHRYSVDVVSLPDPMTLYVAPNGSDKGNGSQAQPLDLATAVELLPAGGTIILKDGDYQGMEIPLTASGSADKLKHLRAEGDNVRFVSELRHEANYWHYQGIEVAGAQFIVHGSHNTFEKMVTHGAPDTGFVITSPENIGRALWASYNQVIESESYNNMDPSQINADGFAAKMRIGDGNTFIRCLSHHNIDDGWDLFNKVEDGANGAVTILDSISFSNGRTLDVANKGGTIGNGFKLGGEGIPVPHVVKNSLSFNNNMDGFTDNFNPGALVLSDNVSIDNKRFNYLFRKSPYSGEIEQGTFTNNRSYRFHVSSKYDDVINSAKSTGNALVENGTTYTSDGKAVDSKTLAPLKQASVIDTQQAIPGKQEAMQLKQLIH
>NZ_CP034299.1|WP_080254346.1|566138_566936_+|DNA-binding-transcriptional-regulator-KdgR
MKGATMEKSTQPEAVSSVLKVFHILQALGEQKAIGVSELSQRLMMSKATTYRFLQTMKSLGYVSQEGEADKYSLTLKLFELGAKSLEYVDLIELADKEMRHISEQTNEALHLGALDENAIIYIHKIDSGYNLRMQSRIGRRNPLYSTAIGKVLLSERDESFVRDVLSDVEFIKHTEKTLENTDQVLEELAKVRNFHYAEDNEEQEPGLRCIAAPIYDRFGQIIAGLSISFPTIRFDEERMEYYVGLLHQAGKNISEQLGYHDYPA
>NZ_CP034299.1|WP_069539386.1|567019_568888_+|CBS-domain-containing-protein
MGTSVTPNIFDFLIKIDPFDKLPEPVVESIANSVKVKYLVRGETIGFSALCDQRYLYIIRTGAIEQRTPNGELRARLGQDDQFGFTFLDPLENAEDGYQAEAIEDSLLYLIPHSELKLVSEEHPEFADYFAVQANVRLSSAVKYVCRKEEKGLFFRTVGEIASENIAIVDVNDSIRSVAQTMCGKQRSSCAVVMKEGEIIGLVTDRDMTKSVVAQDMDTNQPIADVMTPNPVLIEDDAKVIQAISLMLQYNIRCLPVVHGKQVKGLLTTTHLVHNHRTQSLFLIEKIKYASSLNALAALKEERQTIFQALVESGVSAEIQGRVMSMIMDAFTRRIIQLNEELLGPPPCDYAWLVAGSHARNEVHMLSDQDSAIVLSDDATEEHKLYFTHLAMRVCNGLAACGYPLCDGKYMAASPKWCQPIRRWKEYYQKWVASPEYNKLLSISVFLEVRAIHGNREFVDQIQQHLHDCIQKSPSFIPALVRDAIDTQPPLGIFNNLVLEKGGENSNTLNIKKYALNLIIDLARIFSLAAGGSLTGTEERFRYAAQHGTLSKDSVENIIGAYRFITQVRFRHQLNAILAGTTPDNHIAPDDFSSFERKHLKDAFKIISELQDVAKLKFVKGA
>NZ_CP034299.1|WP_114868009.1|568890_569601_+|DNA-polymerase-III-subunit-epsilon
MIKRWFKRWETPLSPEQKRQAIHVVDDWPIVLKDYLQQPLVDDSTTLKDLSFVALDFETTGVDAQGDKILSIGVVDLTLDGIDIASSKEWYICHGQFIKPETAQINGLTPQDLAKGLPLDEGMNRLLERITGKVVLAHGCCIEKAFIHAYFSSRYQVEDFPAYFVDTLQIEKQFSYAGKSGAHSSYQLDDLRRYYHLPGYLSHSAASDALACAELFLVQSKKLTALPDVTLRQLMR
>NZ_CP034299.1|WP_005464972.1|569601_570471_-|LysR-family-transcriptional-regulator
MANWEGVSEFVAVAETNSFTGAAAKLKTSVAQISRRVSALEERLAVKLLHRTTRKVSLSEAGQLYYQQCKHLVEGLELAELAVTQMQTEPRGLLRVTAPVTYGEMNLAPLLHQFLEKYPRVDLDLVLTNQKLDLIEQGVDVAIRLGRLQDSSMIAKRLSSRQTYVCASPMYLERFGEPHTLSELGRHQCLVGSVDYWHFKENKRDKSLRVSGRIKCNSGFALVDAAKRGLGLVQLPDYYVQEALDSGELVEVLTDYRDDREGIWALYPQSRNLSPKVRLLIDFLAQELA
>NZ_CP034299.1|WP_006740949.1|570551_571358_-|arylamine-N-acetyltransferase
MNKTDLNAYLTKLGLPSELPADLESLHKIHVAQHRCLPFENFDISLQRGISVEIEDIIQKTVYHSRGGYCFELNGLMLDVLKTLGFEARSLLGRVHVMGTPTGRSHQITLVTLDEQAWIVDVGFGSNTPRAPLPFILNQVIQTDLQTFRFVEDAQFGYFLQVLSTDGTDTWNNLYSFDLEFVFAGDIACGNFFTSTSPHSRFTSARVAAKATESGLVTLLNYTLKYTSQGEQTELELEPGQAYLDALKEYFGIELDAQYGDLRPLPDA
>NZ_CP034299.1|WP_005464962.1|571651_572800_+|S-(hydroxymethyl)glutathione-dehydrogenase/class-III-alcohol-dehydrogenase
MTLEIKPGQTHIKSKAMVAWAAGEPLKMEEVDVQLPKAGEVLVRIVATGVCHTDAFTLSGDDPEGIFPSILGHEGGGIVEMVGEGVTSVEVGDHVIPLYTAECGECKFCKSGKTNLCQAVRETQGKGLMPDGTSRFSINGETIFHYMGCSTFSEYTVLPEISLAKVNKQAPLEEVCLLGCGVTTGMGAVLNTAKVEKGDTVAIFGLGGIGLSAIIGARMAGASRIIGIDINESKFDLAKQLGATDVINPQKFDKPIQEVIVEMTDGGVDYSFECIGNVNVMRQALECCHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRSELPEIVNRYMAGEFGLQEFITHTMGLEDVNKAFDLMHEGKSIRTVIHMDK
>NZ_CP034299.1|WP_005464966.1|572861_573701_+|S-formylglutathione-hydrolase
MTIENVSQTKVFGGWHKQYTHDSKALNCTMRFAIFLPPNATKSNPVPALYWLSGLTCTDENFMQKAGAFRMAAELGIAIIAPDTSPRGEGVADDASYDLGQGAGFYLNATQAPWSLHYHMYDYVTQELPAIIEANFPVSDVKSISGHSMGGHGALTIGLKNPTLYRSISAFSPISNPMQCPWGQKAFTAYLGTDIESWKQYDASELLKKEKSPLPILVDQGDADGFLSEQLKPEVLLAAAKQHGSELNLRMQSGYDHSYYFISSFIDNHLNFHAKYLFA
>NZ_CP034299.1|WP_005482833.1|574146_574608_+|oxidoreductase
MKKIVSLSLLLFAPFLSANSITFSSPQQPSVTLKLEELQSLPTTSYTTDLPWIQQSSEFLGVKLSTLLTHVYGSIPEQVDIGSLNNYHSTLSRKDIVRYQPILAYQQDHHYIKVRNKGPYWVIYPLSQYPELDHNEYHAQMVWQVNEMKIKQK
>NZ_CP034299.1|WP_005464959.1|574607_575699_+|GGDEF-domain-containing-protein
MKLSEAYPIKQKNYSTTSKMLLLVFATSLLLANVILLQQTRVLAQSFTDEQKQATWFLFQLSKELSELVSEARRLDENVLKIEGAELQYELAWSRFDLLINSKDVYTFFSRNHIQQYFLQLFNEFKELEPLLVEAKTGDSQAAAQFYRATQTLYLNLVEFVNQNFRLTSQVYETQKDESQRLMKAQYMLFATFVLSILSLTYFFYRESHFHRKLALSDPLTGLGNRNALFVTLRNNTRNRTAFSLCLLDLNGFKNVNDTYGHQAGDTVLCEIAKRLKDMNIDSFSTYRMGGDEFAVVIESSDVDAEEAKKHIHSVFDTPVLNANNVSSLSTSIGVAHYPSDSDNVDFLISIADKRMYKMKFQR
>NZ_CP034299.1|WP_031776724.1|575708_576113_+|hypothetical-protein
MMRKFMQILLLLAVIAAGVLAWVFIPSHETIGQKTLEQALNDDYSLVGHRIYSTDPDAGNRFGYFVLATGQSIEEQEPFLVTSDQFIRMEQTGDNTLSVTVNGRIYQYHNDLWVPKSDGKLQHFLVSATANYVR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1338616 : 1395295

Vibrio_phage(20.0%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005463797.1\|1338616_1339942_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_075110180.1\|1339944_1341246_+	type VI secretion system protein TssL	NA	NA	NA	NA
WP_025788167.1\|1341261_1344780_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_025788166.1\|1344761_1345457_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_005463805.1\|1345467_1346256_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_005480330.1\|1346252_1347374_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_005463809.1\|1347389_1347920_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_005463811.1\|1347919_1349413_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_005463813.1\|1349459_1350980_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_005499024.1\|1350990_1351788_+	hypothetical protein	NA	NA	NA	NA
WP_005499023.1\|1351796_1352261_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_025788164.1\|1352257_1354081_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_031814932.1\|1354077_1355043_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_025788162.1\|1355053_1357621_+	type VI secretion system ATPase TssH	H6X3M6	Enterobacteria_phage	3.1e-88	30.2
WP_005375967.1\|1357826_1358306_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_005488647.1\|1358363_1360199_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.3e-27	24.6
WP_005499010.1\|1360212_1360503_+	type VI secretion protein	NA	NA	NA	NA
WP_025547831.1\|1360503_1361346_+	hypothetical protein	NA	NA	NA	NA
WP_114868236.1\|1361442_1362576_+	exonuclease SbcCD subunit D	A0A217ER54	Bacillus_phage	2.8e-09	26.7
WP_159408453.1\|1362585_1365642_+	AAA family ATPase	NA	NA	NA	NA
WP_011106405.1\|1365706_1366096_-	pyruvate dehydrogenase	NA	NA	NA	NA
WP_029798503.1\|1366496_1367021_+	AAA family ATPase	A0A097BYE2	Leuconostoc_phage	3.9e-14	39.2
WP_029802660.1\|1367051_1367579_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_025442817.1\|1367634_1368156_+	lipocalin	A0A1W6JNX6	Morganella_phage	9.2e-40	46.7
WP_114868426.1\|1368174_1368954_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_114868235.1\|1369093_1370227_+	multidrug effflux MFS transporter	NA	NA	NA	NA
WP_005498994.1\|1370312_1371308_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_005463845.1\|1371408_1372941_-	putative basic amino acid antiporter YfcC	NA	NA	NA	NA
WP_109173691.1\|1373061_1373238_+	hypothetical protein	NA	NA	NA	NA
WP_159408454.1\|1373178_1373550_-	c-type cytochrome	NA	NA	NA	NA
WP_114868234.1\|1373564_1374569_-	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_074534362.1\|1374592_1375162_-	NUDIX hydrolase	Q5ULM8	Lactobacillus_virus	2.7e-08	30.7
WP_114868233.1\|1375377_1377039_+	DUF3763 domain-containing protein	A0A2H4PB07	Aphanizomenon_phage	3.2e-33	29.1
WP_005463855.1\|1377048_1378503_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_101892262.1\|1378507_1378576_-	hypothetical protein	NA	NA	NA	NA
WP_020837924.1\|1379099_1380002_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005486292.1\|1380387_1382094_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_005460963.1\|1382263_1382572_-	AzlD domain-containing protein	NA	NA	NA	NA
WP_005480275.1\|1382568_1383300_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_005498984.1\|1383369_1383513_+	hypothetical protein	NA	NA	NA	NA
WP_159408455.1\|1383540_1384770_-	alanine racemase	NA	NA	NA	NA
WP_021452312.1\|1384881_1386513_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-26	33.3
WP_114868231.1\|1387606_1389130_+	alpha-amylase	NA	NA	NA	NA
WP_005460888.1\|1389260_1389515_+	hypothetical protein	NA	NA	NA	NA
WP_005460910.1\|1389577_1390366_-	lipase	NA	NA	NA	NA
WP_114868230.1\|1390464_1391397_-	CHAD domain-containing protein	NA	NA	NA	NA
WP_010446562.1\|1391461_1392382_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7
WP_114868229.1\|1392903_1393692_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_010446562.1\|1394374_1395295_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7

DBSCAN-SWA_2

1482848 : 1491480

Vibrio_phage(87.5%)

coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025522920.1\|1482848_1484201_-	type II secretory pathway protein	R9TEZ5	Vibrio_phage	3.0e-122	57.2
WP_025816149.1\|1484218_1485292_-	hypothetical protein	O80263	Vibrio_phage	2.1e-126	63.1
WP_024701224.1\|1485291_1485651_-\|coat	minor coat protein	R9TIT8	Vibrio_phage	4.6e-22	45.6
WP_114868206.1\|1487353_1487617_-	hypothetical protein	R9TI50	Vibrio_phage	3.4e-06	41.7
WP_005389159.1\|1487887_1488193_-	hypothetical protein	Q2PZB5	Vibrio_virus	1.1e-19	51.0
WP_114868205.1\|1488276_1490307_-	replication endonuclease	A0A0F6YPA7	Vibrio_phage	9.4e-197	53.2
WP_114868204.1\|1490310_1490928_-	3'-5' exonuclease	W6ASW5	Vibrio_phage	5.4e-39	48.7
WP_114868423.1\|1491111_1491480_+	hypothetical protein	Q858Q3	Vibrio_phage	1.2e-41	71.2

DBSCAN-SWA_3

1523851 : 1595762

Vibrio_phage(37.5%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114868197.1\|1523851_1524934_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_005455385.1\|1525292_1526534_+	outer membrane protein transport protein	NA	NA	NA	NA
WP_114868196.1\|1526555_1528964_+	lipase	NA	NA	NA	NA
WP_005455388.1\|1529242_1529800_+	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_005451745.1\|1529961_1530153_-	hypothetical protein	NA	NA	NA	NA
WP_023622961.1\|1530432_1531452_-	TerC/Alx family metal homeostasis membrane protein	A0A291LBC5	Escherichia_phage	1.1e-39	40.2
WP_069492363.1\|1531973_1533716_-	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_015313222.1\|1533987_1535622_+	ATP-dependent endonuclease	NA	NA	NA	NA
WP_005483841.1\|1535815_1536298_-	DUF1097 domain-containing protein	NA	NA	NA	NA
WP_005498809.1\|1536566_1537472_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024702949.1\|1537736_1539188_+	formate transporter FocA	NA	NA	NA	NA
WP_005477055.1\|1539307_1539877_-	YceI family protein	NA	NA	NA	NA
WP_114868195.1\|1539873_1540413_-	cytochrome b	NA	NA	NA	NA
WP_025611272.1\|1540587_1540830_-	DUF2164 domain-containing protein	NA	NA	NA	NA
WP_005454376.1\|1541044_1541677_+	hypothetical protein	NA	NA	NA	NA
WP_075984594.1\|1542695_1543961_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.8e-52	33.6
WP_025795957.1\|1544027_1544624_-	DUF479 domain-containing protein	NA	NA	NA	NA
WP_005498789.1\|1544708_1544813_-	hypothetical protein	NA	NA	NA	NA
WP_114868194.1\|1545201_1546632_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-18	40.3
WP_025525976.1\|1547184_1547853_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_011106366.1\|1547929_1548022_+	hypothetical protein	NA	NA	NA	NA
WP_114868193.1\|1548036_1549788_-	HD domain-containing protein	NA	NA	NA	NA
WP_020842098.1\|1549858_1550368_-	hypothetical protein	NA	NA	NA	NA
WP_100550169.1\|1550368_1550461_+	hypothetical protein	NA	NA	NA	NA
WP_140122806.1\|1551239_1551704_-	hypothetical protein	NA	NA	NA	NA
WP_159408461.1\|1551938_1553228_+	hypothetical protein	NA	NA	NA	NA
WP_159408462.1\|1553227_1554226_+	hypothetical protein	NA	NA	NA	NA
WP_025612513.1\|1554454_1554931_+	CreA family protein	A0A2I7SAK3	Vibrio_phage	1.5e-20	41.3
WP_159408463.1\|1555009_1556323_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_159408464.1\|1556507_1557934_-\|transposase	IS66 family transposase	NA	NA	NA	NA
WP_159408465.1\|1558455_1559517_-	SIS domain-containing protein	NA	NA	NA	NA
WP_159408466.1\|1559545_1560265_-	UTRA domain-containing protein	NA	NA	NA	NA
WP_159408467.1\|1560283_1561078_-	fructoselysine 6-kinase	NA	NA	NA	NA
WP_159408468.1\|1561120_1562506_-	amino acid permease	NA	NA	NA	NA
WP_159408469.1\|1564402_1564723_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_159408470.1\|1566163_1566883_+	UTRA domain-containing protein	NA	NA	NA	NA
WP_159408471.1\|1568200_1568389_-	hypothetical protein	NA	NA	NA	NA
WP_159408472.1\|1568440_1568716_-	hypothetical protein	NA	NA	NA	NA
WP_159408473.1\|1568736_1569087_-	hypothetical protein	NA	NA	NA	NA
WP_159408474.1\|1570542_1571355_+	hypothetical protein	NA	NA	NA	NA
WP_010446562.1\|1571419_1572340_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7
WP_159408475.1\|1572460_1573912_+	hypothetical protein	NA	NA	NA	NA
WP_140219226.1\|1573945_1575479_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.0e-05	28.2
WP_159408476.1\|1575629_1576133_+	hypothetical protein	NA	NA	NA	NA
WP_159408477.1\|1576288_1576717_+	hypothetical protein	NA	NA	NA	NA
WP_159408478.1\|1576768_1577071_+	hypothetical protein	NA	NA	NA	NA
WP_159408479.1\|1577092_1577491_-\|transposase	transposase	NA	NA	NA	NA
WP_061898581.1\|1578905_1579484_+	DUF2913 family protein	NA	NA	NA	NA
WP_159408480.1\|1579779_1580055_+	hypothetical protein	NA	NA	NA	NA
WP_025612999.1\|1580272_1580719_-	hypothetical protein	NA	NA	NA	NA
WP_159408481.1\|1580825_1581503_-	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
WP_159408482.1\|1581499_1582222_-	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
WP_024701180.1\|1582221_1583760_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	1.4e-19	43.5
WP_159408483.1\|1583762_1587527_-	nitrate reductase subunit alpha	NA	NA	NA	NA
WP_159408500.1\|1587625_1588999_-	NarK family nitrate/nitrite MFS transporter	NA	NA	NA	NA
WP_159408484.1\|1589315_1591067_+	sensor histidine kinase	NA	NA	NA	NA
WP_006071645.1\|1591068_1591749_+	two-component system response regulator NarL	NA	NA	NA	NA
WP_159408485.1\|1591805_1592453_-	iron-sulfur cluster repair di-iron protein	NA	NA	NA	NA
WP_025612679.1\|1592740_1593811_+	CBS domain-containing protein	NA	NA	NA	NA
WP_010446562.1\|1594841_1595762_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	4.6e-175	98.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP034301

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP034298

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP034299

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection