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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP041971 Acinetobacter gyllenbergii strain NCCP 16015 chromosome, complete genome 2 crisprs csa3,DEDDh,WYL,cas3 1 3 3 0

Results visualization

1. NZ_CP041971
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041971_1 857797-857960 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP041971_2 3873697-3873844 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP041971_1 1.1|857829|34|NZ_CP041971|CRISPRCasFinder 857829-857862 34 NZ_CP041971.1 858060-858093 0 1.0

1. spacer 1.1|857829|34|NZ_CP041971|CRISPRCasFinder matches to position: 858060-858093, mismatch: 0, identity: 1.0

gctgcggtacgttctgctttttcggctgcatcac	CRISPR spacer
gctgcggtacgttctgctttttcggctgcatcac	Protospacer
**********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP041971_2 2.2|3873785|32|NZ_CP041971|CRISPRCasFinder 3873785-3873816 32 CP031730 Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence 167843-167874 7 0.781
NZ_CP041971_1 1.1|857829|34|NZ_CP041971|CRISPRCasFinder 857829-857862 34 NC_019699 Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence 37129-37162 9 0.735
NZ_CP041971_1 1.1|857829|34|NZ_CP041971|CRISPRCasFinder 857829-857862 34 MN694605 Marine virus AFVG_250M225, complete genome 5665-5698 9 0.735
NZ_CP041971_1 1.1|857829|34|NZ_CP041971|CRISPRCasFinder 857829-857862 34 NZ_CP011513 Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence 133624-133657 10 0.706
NZ_CP041971_2 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder 3873725-3873756 32 CP040041 Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence 94281-94312 10 0.688
NZ_CP041971_2 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder 3873725-3873756 32 NC_020157 Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence 176956-176987 10 0.688
NZ_CP041971_2 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder 3873725-3873756 32 NC_019217 Uncultured bacterium HHV216 plasmid pHHV216, complete sequence 55723-55754 10 0.688
NZ_CP041971_2 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder 3873725-3873756 32 NC_019299 Uncultured bacterium HH1107 plasmid pHH1107, complete sequence 55400-55431 10 0.688

1. spacer 2.2|3873785|32|NZ_CP041971|CRISPRCasFinder matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

ttggctaacaggtatcttcattatttccatcc	CRISPR spacer
ttggctaacaggtatctccattagtattttgc	Protospacer
*****************.***** * .. * *

2. spacer 1.1|857829|34|NZ_CP041971|CRISPRCasFinder matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 9, identity: 0.735

gctgcggtacgttctgctttttcggctgcatcac	CRISPR spacer
tctgcggtacgttctgcttctgcggcgggaattt	Protospacer
 ******************.* **** * * . .

3. spacer 1.1|857829|34|NZ_CP041971|CRISPRCasFinder matches to MN694605 (Marine virus AFVG_250M225, complete genome) position: , mismatch: 9, identity: 0.735

gctgcggtacgttctgctttttcggctgcatcac	CRISPR spacer
ctttctttacgtgcagctttttcggctgcatcta	Protospacer
 .* *  ***** * *****************  

4. spacer 1.1|857829|34|NZ_CP041971|CRISPRCasFinder matches to NZ_CP011513 (Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gctgcggtacgttctgctttttcggctgcatcac	CRISPR spacer
taaggtatactttctgctttttcggcttcataat	Protospacer
   *  .*** **************** *** *.

5. spacer 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

acgaacaaaatgaaggtaatgaaaacccagat	CRISPR spacer
gtcgccgttatgaaggtactgaaaacccaaat	Protospacer
.. . *.  ********* **********.**

6. spacer 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder matches to NC_020157 (Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequence) position: , mismatch: 10, identity: 0.688

acgaacaaaatgaaggtaatgaaaacccagat	CRISPR spacer
cctaacaaaatcaaggtaatgacaactgccgc	Protospacer
 * ******** ********** ***.   ..

7. spacer 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder matches to NC_019217 (Uncultured bacterium HHV216 plasmid pHHV216, complete sequence) position: , mismatch: 10, identity: 0.688

acgaacaaaatgaaggtaatgaaaacccagat	CRISPR spacer
ttgaagaaaatgaaggtcatgaaaagttgtgt	Protospacer
 .*** *********** ******* ... .*

8. spacer 2.1|3873725|32|NZ_CP041971|CRISPRCasFinder matches to NC_019299 (Uncultured bacterium HH1107 plasmid pHH1107, complete sequence) position: , mismatch: 10, identity: 0.688

acgaacaaaatgaaggtaatgaaaacccagat	CRISPR spacer
ttgaagaaaatgaaggtcatgaaaagttgtgt	Protospacer
 .*** *********** ******* ... .*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 713504 : 721390 8 Burkholderia_phage(28.57%) holin NA
DBSCAN-SWA_2 3657332 : 3665318 9 Psychrobacter_phage(62.5%) capsid,terminase NA
DBSCAN-SWA_3 3670722 : 3678051 8 Acinetobacter_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage