CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP032008	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616a, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP032004	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616e, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP032002	Acinetobacter haemolyticus strain 11616 chromosome, complete genome	5 crisprs	cas3,csa3,DEDDh,WYL,PrimPol	7	8	11	2
NZ_CP032003	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616f, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP032006	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616d	0 crisprs	NA	0	0	0	0
NZ_CP032005	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616c, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP032007	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616b, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

7662 : 84819

Escherichia_phage(23.81%)

integrase,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067783.1\|7662_8367_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.3e-118	84.5
WP_004281883.1\|8537_9596_-	2,3-butanediol dehydrogenase	NA	NA	NA	NA
WP_160124365.1\|9863_11483_-	oleate hydratase	NA	NA	NA	NA
WP_160124366.1\|12581_13514_+\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.6e-58	41.7
WP_160124368.1\|13620_16098_-	heavy metal translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.0e-92	34.4
WP_004281879.1\|16276_16471_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_020846310.1\|17040_17973_-\|transposase	IS5 family transposase	A0A1V0E8E1	Vibrio_phage	1.5e-61	42.6
WP_087486619.1\|18649_19869_-\|transposase	IS3-like element ISAba19 family transposase	A0A0N7C1X7	Escherichia_phage	1.8e-78	51.5
WP_004778435.1\|20198_21431_-	ATP-binding protein	NA	NA	NA	NA
WP_086393391.1\|21891_22203_+	type II toxin-antitoxin system HigB family toxin	F5A3A2	Riemerella_phage	1.1e-08	37.4
WP_001067783.1\|23403_24108_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.3e-118	84.5
WP_171503505.1\|25391_25955_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.5e-11	29.5
WP_160124369.1\|27219_28515_-	cytosine deaminase	NA	NA	NA	NA
WP_160124370.1\|28525_29743_-	PucR family transcriptional regulator ligand-binding domain-containing protein	NA	NA	NA	NA
WP_005244938.1\|29739_31017_-	cytosine permease	NA	NA	NA	NA
WP_004778193.1\|31379_31811_-	hypothetical protein	NA	NA	NA	NA
WP_005244939.1\|32028_32700_+	lipase chaperone	NA	NA	NA	NA
WP_160124371.1\|32696_33581_+	hypothetical protein	NA	NA	NA	NA
WP_010589064.1\|40457_41414_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	2.2e-55	39.6
WP_004986500.1\|42060_43356_-	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	4.4e-131	52.7
WP_004986501.1\|43370_43997_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	9.1e-26	42.2
WP_004986506.1\|44108_44750_-	SOS response-associated peptidase family protein	A0A218MNF5	uncultured_virus	3.2e-50	53.5
WP_004986518.1\|45290_45527_+	hypothetical protein	NA	NA	NA	NA
WP_004986524.1\|47441_47732_+	type II toxin-antitoxin system HigB family toxin	F5A3A2	Riemerella_phage	6.1e-09	36.5
WP_004986525.1\|47733_48135_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002045824.1\|49231_50395_+	glutathione-dependent formaldehyde dehydrogenase	E3SJ82	Synechococcus_phage	9.4e-08	29.4
WP_004986534.1\|51396_51537_+	hypothetical protein	NA	NA	NA	NA
WP_004986535.1\|51604_53683_-	catalase	A0A2K9L0T1	Tupanvirus	1.0e-134	47.0
WP_160124378.1\|53973_54663_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_103800267.1\|54664_55755_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_004981674.1\|55917_56214_-	hypothetical protein	NA	NA	NA	NA
WP_004986537.1\|56321_56498_-	hypothetical protein	NA	NA	NA	NA
WP_004986541.1\|57120_58527_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_004986545.1\|58728_58962_-	DUF2171 domain-containing protein	NA	NA	NA	NA
WP_104794984.1\|59227_60241_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_005005846.1\|60228_61005_+	PIG-L family deacetylase	NA	NA	NA	NA
WP_005005841.1\|60997_61597_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_048766483.1\|61593_62238_+	glycosyltransferase	NA	NA	NA	NA
WP_004986555.1\|62621_63812_+	MFS transporter	NA	NA	NA	NA
WP_004986558.1\|63875_65312_-	trehalose-6-phosphate synthase	NA	NA	NA	NA
WP_004986561.1\|65299_66151_-	trehalose-phosphatase	NA	NA	NA	NA
WP_004986570.1\|66691_67393_-\|transposase	IS1 family transposase	A0A218MNG1	uncultured_virus	1.6e-34	53.6
WP_004986572.1\|67456_67651_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_004986576.1\|67643_68906_-	exodeoxyribonuclease VII large subunit	NA	NA	NA	NA
WP_004984985.1\|69468_69696_+	hypothetical protein	NA	NA	NA	NA
WP_004984984.1\|69789_70059_+	hypothetical protein	NA	NA	NA	NA
WP_160124373.1\|72165_73365_+\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	2.4e-38	28.3
WP_160124379.1\|73392_73614_+	antitoxin HicB	NA	NA	NA	NA
WP_004762875.1\|73810_74062_-	hypothetical protein	NA	NA	NA	NA
WP_004762874.1\|74257_74479_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_160124374.1\|74671_75634_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.5e-32	33.0
WP_100834114.1\|76640_77784_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	4.6e-15	28.1
WP_020899627.1\|78562_79888_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_160124377.1\|81164_81869_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	6.7e-118	84.1
WP_039908973.1\|83129_83525_-	hypothetical protein	NA	NA	NA	NA
WP_087486619.1\|83600_84819_+\|transposase	IS3-like element ISAba19 family transposase	A0A0N7C1X7	Escherichia_phage	1.8e-78	51.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP032002

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP032002_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032002_1

71384-71530

Orphan

Consensus_repeat	Method
AGTAATAAAGTTTCATCCTATAATAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP032002_1

>merge|NZ_CP032002|1|71384-71530|PILER-CR
AGTAATAAAGTATCATCCTAAAATCAATACAAGTTATTGATTTTAGGCTTTTAGCAAGATTCTTGAGAAAAATAAAGTTTCATCCTATATTATAAATTCTTCTCGTATTTCAAAAAGTAGAAGTAATAAAGTTTCATCCTTTAATAT

>NZ_CP032002|1|1|71384-71530|PILER-CR
AGTAATAAAGTATCATCCTAAAATCA	ATACAAGTTATTGATTTTAGGCTTTTAGCAAGATTCTTGAGAAAAATA
AAGTTTCATCCTATATTATAAATTCT	TCTCGTATTTCAAAAAGTAGAAGTAATA
AAGTTTCATCCTTTAATAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032002.1\|WP_008942095.1\|64470_65748_+\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP032002.1\|WP_017396311.1\|75433_76798_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|224128
NZ_CP032002.1\|WP_160124130.1\|70692_71331_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP032002.1\|WP_160124132.1\|73582_75421_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP032002.1\|WP_004637207.1\|78251_78701_-\|transcription-antitermination-factor-NusB	unknown	unknown	gnl\|CDD\|234686
NZ_CP032002.1\|WP_004637244.1\|66716_67436_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
NZ_CP032002.1\|WP_017396433.1\|70003_70468_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP032002.1\|WP_008942103.1\|77319_78237_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|235583
NZ_CP032002.1\|WP_004637206.1\|78704_79175_-\|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl\|CDD\|234606
NZ_CP032002.1\|WP_020846310.1\|72389_73322_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP032002.1\|WP_160124133.1\|80592_81867_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_008942094.1\|63198_64386_+\|class-C-beta-lactamase	unknown	unknown	gnl\|CDD\|236894
NZ_CP032002.1\|WP_005088737.1\|76820_77342_-\|phosphatidylglycerophosphatase-A	unknown	unknown	gnl\|CDD\|368021
NZ_CP032002.1\|WP_008942096.1\|65747_66635_+\|aromatic-amino-acid-DMT-transporter-YddG	unknown	unknown	gnl\|CDD\|183277
NZ_CP032002.1\|WP_160124128.1\|68089_68983_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP032002.1\|WP_160124129.1\|69255_69915_+\|bifunctional-nicotinamidase/pyrazinamidase	unknown	unknown	gnl\|CDD\|238493
NZ_CP032002.1\|WP_005087342.1\|67471_68074_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371893
NZ_CP032002.1\|WP_008942093.1\|62012_63173_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|369642
NZ_CP032002.1\|WP_004637205.1\|79186_80308_-\|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|237587
NZ_CP032002.1\|WP_160124131.1\|71547_72348_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP032002.1\|WP_008942095.1\|64470_65748_+\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP032002.1\|WP_017396311.1\|75433_76798_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|224128	COG1207, GlmU, N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane].	0
NZ_CP032002.1\|WP_160124130.1\|70692_71331_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	1.53048e-33
NZ_CP032002.1\|WP_160124132.1\|73582_75421_-\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP032002.1\|WP_004637207.1\|78251_78701_-\|transcription-antitermination-factor-NusB	gnl\|CDD\|234686	PRK00202, nusB, transcription antitermination factor NusB.	2.79339e-52
NZ_CP032002.1\|WP_004637244.1\|66716_67436_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	4.23094e-148
NZ_CP032002.1\|WP_017396433.1\|70003_70468_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.32057e-31
NZ_CP032002.1\|WP_008942103.1\|77319_78237_-\|thiamine-phosphate-kinase	gnl\|CDD\|235583	PRK05731, PRK05731, thiamine monophosphate kinase; Provisional.	3.19506e-132
NZ_CP032002.1\|WP_004637206.1\|78704_79175_-\|6,7-dimethyl-8-ribityllumazine-synthase	gnl\|CDD\|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	3.74914e-76
NZ_CP032002.1\|WP_008942094.1\|63198_64386_+\|class-C-beta-lactamase	gnl\|CDD\|236894	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional.	0
NZ_CP032002.1\|WP_005088737.1\|76820_77342_-\|phosphatidylglycerophosphatase-A	gnl\|CDD\|368021	pfam04608, PgpA, Phosphatidylglycerophosphatase A. This family represents a family of bacterial phosphatidylglycerophosphatases (EC:3.1.3.27), known as PgpA. It appears that bacteria possess several phosphatidylglycerophosphatases, and thus, PgpA is not essential in Escherichia coli.	7.79406e-47
NZ_CP032002.1\|WP_008942096.1\|65747_66635_+\|aromatic-amino-acid-DMT-transporter-YddG	gnl\|CDD\|183277	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG.	5.8248e-154
NZ_CP032002.1\|WP_160124128.1\|68089_68983_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	1.3689e-177
NZ_CP032002.1\|WP_160124129.1\|69255_69915_+\|bifunctional-nicotinamidase/pyrazinamidase	gnl\|CDD\|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	4.577e-101
NZ_CP032002.1\|WP_005087342.1\|67471_68074_-\|hypothetical-protein	gnl\|CDD\|371893	pfam12092, DUF3568, Protein of unknown function (DUF3568). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 130 amino acids in length.	0.000990594
NZ_CP032002.1\|WP_008942093.1\|62012_63173_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|369642	pfam07995, GSDH, Glucose / Sorbosone dehydrogenase. Members of this family are glucose/sorbosone dehydrogenases that possess a beta-propeller fold.	2.24772e-166
NZ_CP032002.1\|WP_004637205.1\|79186_80308_-\|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	gnl\|CDD\|237587	PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II.	0
NZ_CP032002.1\|WP_020846310.1\|72389_73322_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.3328e-48

>NZ_CP032002.1|WP_160124130.1|70692_71331_+|YitT-family-protein
MNTEQNISLVSAVTPVVEQHSKIEDALAMLIGTFILSFAMILLKQAGIMTGGTAGLSLLIHYITDVQFGILFFLINIPFYYFAYKKMGLALVVKTFIAVALLAGFTETIPHFVQLSTVHPIYATVFANVLMGVSFLILFRHRSSLGGINLLVLYLQERFQLPAGKVQMGIDVAILLTSLFFVEWHLILISILGVVILNSIILLNHKTTRYVA
>NZ_CP032002.1|WP_017396433.1|70003_70468_+|Lrp/AsnC-family-transcriptional-regulator
MIEELDEFDRKIIHHLQLNGRLANQELAELVGLSTSQCSRRRIQLEQKKIITGYYAQVALSADPTPIMGIIEVKLQNYNDATHDRFVDFLLHEPAVKDIHKLTGSYDFALKVAVRNLDDMVKLIGTLSSSDFGVSNLNTSIVLEKLKENGIATK
>NZ_CP032002.1|WP_160124129.1|69255_69915_+|bifunctional-nicotinamidase/pyrazinamidase
MSHQTSKLLKNAALIVVDVQNGFTPGGNLAVADADQIIPLINRLAPQFEHVVLTQDWHPDQHISFAENHKNKQPFETIELSYGTQVLWPKHCVQGTHDAEFHSELQIPTAQLIIRKGVHQHIDSYSAFMEADRQTPTGLNGYLKEHQIDTVYIVGIATDFCVAWTAIDAADLGFKTYVIEDACKAIDLNGSLSEAWQQMLAKGVIRIQSGPIFNETRDN
>NZ_CP032002.1|WP_160124128.1|68089_68983_-|4-hydroxy-tetrahydrodipicolinate-synthase
MTQQAQNIQGSIVALVTPMFEDGRVDWKSLEKLVEWHIQQGTHSIVAVGTTGEASTLSMEEHTQVIKEVIRVANKRIPIIAGTGANSTHEAIELTKAAKELGADAALLVTPYYNKPTQEGLYQHYKAIAEAVDLPQILYNVPGRTGVDMQNETVIRLADVKNIVGIKDATGDVPRGKALIDGLNGKIAVYSGDDETAWELILLGAKGNISVTANVAPKQMSDVCEAALAGDKEKAQSLNQQIANLHNILFCESNPIPVKWALHEMGYIGTGVRLPLTTLAEQYREPLRADLKVAGII
>NZ_CP032002.1|WP_005087342.1|67471_68074_-|hypothetical-protein
MQLRVGIVLVISALSLAGCGRFALNNHSLDYKKAEALEPLKFPEGATVRPFTPLYPAPTVDPLAIQHAPTFENKTGNRYALPRPESMQTTASNPDDNVVTLGRPQLVMDGNRNPLLKVEGPTAEAWQYTFATLNSLNYKVISQANNGYEATIQVDNQTYVLKLSAVGSNNTIALFKPDATFADQAIATEVLAQIYQNWPA
>NZ_CP032002.1|WP_004637244.1|66716_67436_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MLKQTLLYTGKAKSVYETDNADHLILVFRDDASAFNGEKIEQLDRKGKVNNRFNAFIMEKLAEAGIETHFEKLLSPTEVLVKKLQMIPVECVIRNYAAGSLCRRLGVEEGKELTPPTFELFFKDDALGDPMVNESQAIALGWATADQLEKMKELTYQVNDVLKALFDAGNMILVDFKLEFGVFHDRIVLGDEFSPDGCRLWDKDTKKKLDKDRFRQGLGGVVEAYEEVAARLGINLDDL
>NZ_CP032002.1|WP_008942096.1|65747_66635_+|aromatic-amino-acid-DMT-transporter-YddG
MNSKKATLIGLVAILLWSLIVALIKDVSTHFGAVGGAALIYTLASVFLLFSVGWVQLKSFPKTYLILGSFLFVAYEICLSLSIGYSQNNRQAIEVGMVNYLWPTFTMVAAILFNQQKANVLIIPGFAISLLGIGWVLGGEQGFDLPNMWGNIQSNPLSYGLAFVGTLLWAAYCTLTARIAQGANGITLFFVLVAVVLWIKYFLMGGGGLNFDWSSSVSLVMAAVAMGFGYAAWNVGILHGNVTLLAGASYFIPVFSALFAAFLLSTPLELSFWYGAFMVCIGSILCWFSTRTRKD
>NZ_CP032002.1|WP_008942095.1|64470_65748_+|replication-associated-recombination-protein-A
MSDTHIPLPERLRPRDLSEIIGQDHLLGDNAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNSLDAEAIQTLLNKAIQTDKFLKERFIQIEEYDALIQFAAGDARKALNLIDLIASTFEADVENVVTNAIVVKVAQQNIARYDKSGEQHYDLVSAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGECFRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELAEKTANLPVPLHLRNAPTKLMKQQGYGLDYLYPHNYPEHFVLQAYLPPELQGTKLYERALNKREVEAERLQQRRWQQEQQQQQ
>NZ_CP032002.1|WP_008942094.1|63198_64386_+|class-C-beta-lactamase
MTKPNDFSRTLKKLLMAAGLLSFSSILWAKNLTEQQVKAVIDQQFKPLLTQYKVPGMAVAVTLNGKHYFVNYGLASKQSQQAVSNKTLFELGSVSKVFNATLAGYAQAQGQLSFSDHPAQYFPELKNTAVNQATLLNLGTYNAGGFPLQFPDHVVKQQDMIRYFQEWQSKTKIGAARQYSNPSIGLMGYVTALAMKKPYVELIEQTLFPQLGMTQSFINVPKPYMSQYAWGYKADQAMRVSPGMFDAEAYGVKSSSADMLKFLDAQINVQQLQQPIRKAIEHTHVGYFELGAMTQGLGWEQYAYPVKLETLLEGNSSKMALESHAITPIKQPKIASPATYFNKTGATNGFGAYAAFIPQQKIGMVMLANTNFPNEARITATYQAMQQILKQNAAQ
>NZ_CP032002.1|WP_008942093.1|62012_63173_+|PQQ-dependent-sugar-dehydrogenase
MIKHIVTPLLCSGFIFLQACGTNNSNPKTTDQSTAQHSRQASLQTYHIENIAQFNEPWAITSLPDQRLLITERRGQLKIFDPKTKQSLSIEGIPAVSYGGQGGLGDVILHPDFPNNHWIYLSYAVKGQGGYGAVISRAKLDLSSATQPKLTDVKVIWQQVPKVSGQGHYGHRMVFGADGKLWVSSGERQKFDPAQDMKSNLGKVLRLNEDGTPAEGNPFSQQGGVSAEIWSLGHRNPLGIAFDTQGQLWVVEMGPEGGDELNLIVKGANYGYPIVSNGNHYSGLPIPDHSTRPEFKAPEIDWTPVISPSSMIVYTGDQFPLWRQKALIGGLSSKSIVVVDLNTQPVKEVQRLDMKQRIRGLHQAQDGSIWVIEDGPQAKLLKLNAN
>NZ_CP032002.1|WP_160124131.1|71547_72348_-|hypothetical-protein
MQQSHEELTEVHATSIIKPIEFGEQDQVSSLISSINITDIENTKICIDSTGFMRNVLALLIITLGYLGCKKISVLYSEPIQYIENENTHFSISALKVKALDGTAITITTNAKDSLIMSIGFDHDLMSQVVNDYESATFYPLYGFPSLSADMFQQSAFRSSNIIPIKENDLTTRKFFAPANDPFSTAKQIQRIVAIIHHREQNLKHNIYLCPLSTKAQVIGHAYYWWKEGQHQSQNGMINIILPMCISYKRETSVGLRRVWQYTLEM
>NZ_CP032002.1|WP_020846310.1|72389_73322_+|IS5-family-transposase
MKKPTHKIYRTTNWPAYNRALMSRGNIAIWFDPATQWYAPSKGKQGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWTAPDYSTLCRRQKHIDIAISYQKSSDGLHLLIDSTGMKFLGEGEWKRKKHGPEYRRQWRKLHIGIDAETLQIRAIQLTTNNVSDSQVLGDLLDQIPQDEQIDSVYTDGAYDTKQCRQVIADRQAHAVIPPRKNAKPWKDTKISSLERNELLRTVKRLGRRLWKKWSGYHRRSLVETKMHCIKLLGDKLMARSFPSQVNEIHARVAVLNRFTELGRPLTQVTP
>NZ_CP032002.1|WP_160124132.1|73582_75421_-|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGGVAERCVTDILIEGLKRLEYRGYDSAGLALLNNQKILRERRVGKVANLDEAVSEQQLTGNIGIAHTRWATHGKPTEDNAHPHISGNVAVVHNGIIENYQELKDALQAQGYVFTSQTDTEVVAHLVNDALKNTDSLLEAVQQVVPQLKGAYALGIIHTEHPDELITVREGSPLVIGVGIGENFISSDQLALLPVTNRFVYLEEGDIARLTRTSIEVFVNGERVERPVKELDATVSNASKGEYKHFMLKEIYEQPEAIQQTISQALNGNALREDFLSHANADFSKIQQVQIIACGTSYHAGMIAKYWFEQLIGVSCQIEIASEFRYRNPVIVANTLYICISQSGETADTLAALREVQKRAKAQEICISTMTICNVATSSMVRETDHHLLTLAGPEIGVASTKAFTTQLAALMLLILKIGQVKQQIAEIQLTEIISGLWHCPKVILDTLQCDTEILRLSTLFVEKNHCLFLGRGTHFPIALEGALKLKEISYIHAEGYAAGELKHGPLALVDNEMPVVILAPQDDMLDKLKSNMEEVQARGGELFVFADQHSGVHAKDRQHVVHIPAVCEWLAPIVYSIPVQLLSYHVAVLLGTDVDQPRNLAKSVTVE
>NZ_CP032002.1|WP_017396311.1|75433_76798_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSTTVIILAAGKGTRMRSQRPKVLQPLAGRPLLGHVIQTAKKLNAQNIITIYGHGGELVKQSFAEEHIDWVEQAEQLGTGHAVQMTLPVLPHDGTSLILSGDVPCIHANTLQKLLDASTQTGIGLVTLTVEDATGYGRIVRQDGKIQAIVEHKDASEAQRQIKEFNTGIYCVSNAKLHEWLPKLSNENAQGEYYLTDIVAMAIADGMEVASVEPELAFEVDGVNNRLQLATLERQFQQQQAKELMEQGVHLIDPNRFDLRGSLKCGQDVQIDINVIIEGDCELGDNVQIGAGCILKNTRIAAGTKIQAYSIFENAVVGENTQIGPFARLRPGANLANDVHIGNFVEVKNTNIGQGSKANHFTYLGDADIGADCNIGAGTITCNYDGANKHRTIIEDHVFIGTNNSLVAPIKIGQGATTGAGSTLTRNVTEHSLAVERSKQFEKANYQRPQKLKK
>NZ_CP032002.1|WP_005088737.1|76820_77342_-|phosphatidylglycerophosphatase-A
MDTNTLHKPPIHFNQMTWFDRFIVFCGVGFGSGLAPKAPGTFGSAFALLFIPIWLQLGFMGSIIAIVFMSLVGIYICGHTAKVIHVHDDGRIVWDEFAGQSITLLPLIYLQQVNWLWVITGFILFRIFDVWKPFPISWADQKVSGGLGIMLDDIIAGLWAALCIWIIHFYFLT
>NZ_CP032002.1|WP_008942103.1|77319_78237_-|thiamine-phosphate-kinase
MAEFSIIDQYFKRPSNVDVSLGIGDDSAIVTPPPAQQLVICTDTLVAGRHFPLNTSAHAIGWKSVAVNLSDLAAMGAKPHSILLALSLPTIDHEWLAEFSRGLFECCDQFGVSLIGGDTTQSTQLTISVTALGWIEQGQAVTRAGAQVGDFICVSGQVGDAAFGLQHLGHPLQQRLDYPTPRCQLGQQLKGLASSMIDVSDGLAQDLGHILKASNKGATLQLDQLPIDESLKSLEMQKAWHYALAGGDDYELCFTISPQNYEKLLRQSLDVPLTIIGEITQQTGLLFEYMGETYPLHVHGYQHFA
>NZ_CP032002.1|WP_004637207.1|78251_78701_-|transcription-antitermination-factor-NusB
MSQTLQAAYAAKRKARRFAVQGIYEWQMSQNPVHEIEARTRVENAMHKVDLNYYHELLTQVVAQHEALDELLVPVLDRELSALDGVELATLRLGAYELRDHLEVPYRVVLDEAIELAKHFGGADSHKYINGVLDRLSSKLREAEKQQAK
>NZ_CP032002.1|WP_004637206.1|78704_79175_-|6,7-dimethyl-8-ribityllumazine-synthase
MAIRRIEGLLHLASEGRYAILVGRFNSFVVEHLLEGAIDTLKRHGVAEDAITVIHAPGAWELPIVAKKLAASNKFDAIIALGAVIRGSTPHFDFVAGECAKGLGVVALESTMPVINGVLTTDSIEQAIERSGTKAGNKGSEAALTAIEMVNLLKAI
>NZ_CP032002.1|WP_004637205.1|79186_80308_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II
MPLSRVEELVADIRAGKMVILMDDEDRENEGDLVIAATHVRPEDINFMITHARGLVCLTLSRERCKQLNLPLMVDQNGAQHATNFTLSIEAAEGISTGISAAERAHTIHAAVAAHAKPSDIVQPGHIFPLMAQPGGVLHRAGHTEAGCDLARLAGLEPASVICEIINDDGTMARRADLEIFAEKHGLKIGTIADLIHYRMTNEQTVERLSQETIETEYGTFDLYKYREIGDPDIHLALVKGEPKEGVTTVRVHGFSPVRDLLKLKKADGSAAWNLDLAMKTIAASERGVLVWIGQDHLEDLGHALHQLNQPKPLKSNAALSQQYQTIGVGAQILRDLGVEKMKLLSSPLRFNALSGFNLEVVEYITADQITAK
>NZ_CP032002.1|WP_160124133.1|80592_81867_-|hypothetical-protein
MNAPRQGLFASLLIVSFALHTFLLVIATTHQLNENRASQGQLMTSQLVADSLAELEPANTVSLALVANRYATNPSVASIRILDSNKQVLATSGMAKTRQGEVFVRDALQNEKKVGTVEITLIQPSIGEILRTQWLAIFASLFLHFLIWLAYRVIARPTRSEYLTRINQENHLKHEIQRLTQALALEKQNAITLVTQAQQQAKTQNKTPAEKKPRESTQLDDHSLALNIQFYDPKQLLNSVNQSVSVPYFKLCQLFLDKSIDLSTKHYQIDSTQIHVVQEFSAEGATLSTTSEQPEALECLMMIGAVFQLLSDVLYKRYREDKRFALQTRGAVASAVDAMQLDAVEAAKRLTQHIHAKEAALHLNHEQLKTIQNHYELVAMPNPSNIMTRHAFMINGMNEECATVAQTLRTEILMGKKAKAATES

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Crispr_ID: NZ_CP032002_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032002_2

454864-455370

Orphan

Consensus_repeat	Method
CACCGATACCNCCAATGATGCCAGTGATNAGNTCAA	CRT

8 spacers

The CRISPR arrays of NZ_CP032002_2

>merge|NZ_CP032002|2|454864-455370|CRT
CACCGATGCCACCAATGATGCCTGTCAAGATATCCAGAGGGCTACCGCCATCACCACCACCGATGCCACCAATGATGCCAGTGATCAGATCAAGAGGACTACCGTCACCGCCAATGCCACCGATACCGCCAATGATGCCAGTGATGAGGTCAAGCGGACTACCGTCACCGCCAATGCCGCCGATACCACCAATGATGCCAGTGATGAGGTCAAGCGGACTACCATCGCCGCCAATGCCACCGATACCGCTAATGATGCCAGTGATCAGGTCAAGCGGACTACCGTCACCGCCAATGCCACCGATACCACCAATGATGCCAGTGATTAGGTCAAGCGGACTACCGTCACCGCCAATGCCACCGATACCGCCAATGATGCCAGTGATTAGATCAAGAGGGTTACCATCACCACCACCGATACCGCCAATGATGCCAGTGATCAGATCAAGTGGACTACCATCGCCGCCAATGCCACCGATACCGCCAATGATGCCAGTGATTAGATCAA

>NZ_CP032002|2|1|454864-455370|CRT
CACCGATGCCACCAATGATGCCTGTCAAGATATCCA	GAGGGCTACCGCCATCACCAC
CACCGATGCCACCAATGATGCCAGTGATCAGATCAA	GAGGACTACCGTCACCGCCAATGC
CACCGATACCGCCAATGATGCCAGTGATGAGGTCAA	GCGGACTACCGTCACCGCCAATGC
CGCCGATACCACCAATGATGCCAGTGATGAGGTCAA	GCGGACTACCATCGCCGCCAATGC
CACCGATACCGCTAATGATGCCAGTGATCAGGTCAA	GCGGACTACCGTCACCGCCAATGC
CACCGATACCACCAATGATGCCAGTGATTAGGTCAA	GCGGACTACCGTCACCGCCAATGC
CACCGATACCGCCAATGATGCCAGTGATTAGATCAA	GAGGGTTACCATCACCAC
CACCGATACCGCCAATGATGCCAGTGATCAGATCAA	GTGGACTACCATCGCCGCCAATGC
CACCGATACCGCCAATGATGCCAGTGATTAGATCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032002.1\|WP_005086792.1\|462927_463824_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200583
NZ_CP032002.1\|WP_115736360.1\|468579_469362_+\|NRDE-family-protein	unknown	unknown	gnl\|CDD\|377554
NZ_CP032002.1\|WP_004640966.1\|467034_467625_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP032002.1\|WP_008941226.1\|464732_465641_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP032002.1\|WP_005086822.1\|441101_441551_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_005086790.1\|463815_464625_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP032002.1\|WP_005086812.1\|448187_449684_-\|tripartite-tricarboxylate-transporter-permease	unknown	unknown	gnl\|CDD\|225870
NZ_CP032002.1\|WP_005088311.1\|440152_441040_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|273359
NZ_CP032002.1\|WP_008941225.1\|462215_462857_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP032002.1\|WP_008941218.1\|441808_443848_-\|M3-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341051
NZ_CP032002.1\|WP_004640980.1\|461676_462174_+\|YcxB-family-protein	unknown	unknown	gnl\|CDD\|379553
NZ_CP032002.1\|WP_004640968.1\|465668_466919_-\|YihY-family-inner-membrane-protein	unknown	unknown	gnl\|CDD\|179313
NZ_CP032002.1\|WP_005086808.1\|450238_451234_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225722
NZ_CP032002.1\|WP_004640990.1\|451753_452863_-\|porin	unknown	unknown	gnl\|CDD\|238208
NZ_CP032002.1\|WP_008941224.1\|460225_461521_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_008941219.1\|444039_446478_-\|ribonuclease-R	unknown	unknown	gnl\|CDD\|273947
NZ_CP032002.1\|WP_008941222.1\|449698_450142_-\|tripartite-tricarboxylate-transporter-TctB-family-protein	unknown	unknown	gnl\|CDD\|377815
NZ_CP032002.1\|WP_004640964.1\|467660_468473_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_CP032002.1\|WP_008941221.1\|447057_448122_-\|AbrB-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|377472
NZ_CP032002.1\|WP_005086820.1\|441563_441770_-\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|312883

Protein	Function_ID	Function_description	E-value
NZ_CP032002.1\|WP_005086792.1\|462927_463824_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200583	cd10960, CE4_NodB_like_1, Catalytic NodB homology domain of uncharacterized bacterial polysaccharide deacetylases. This family includes many uncharacterized bacterial polysaccharide deacetylases. Although their biological function still remains unknown, members in this family show high sequence homology to the catalytic NodB homology domain of Streptococcus pneumoniae polysaccharide deacetylase PgdA (SpPgdA), which is an extracellular metal-dependent polysaccharide deacetylase with de-N-acetylase activity toward a hexamer of chitooligosaccharide N-acetylglucosamine, but not shorter chitooligosaccharides or a synthetic peptidoglycan tetrasaccharide. Like SpPgdA, this family is a member of the carbohydrate esterase 4 (CE4) superfamily.	3.62507e-73
NZ_CP032002.1\|WP_004640966.1\|467034_467625_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	1.16417e-59
NZ_CP032002.1\|WP_008941226.1\|464732_465641_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	1.03589e-11
NZ_CP032002.1\|WP_115736360.1\|468579_469362_+\|NRDE-family-protein	gnl\|CDD\|377554	pfam05742, TANGO2, Transport and Golgi organisation 2. In eukaryotes this family is predicted to play a role in protein secretion and Golgi organisation. In plants this family includes Solanum habrochaites Cwp, which is involved in water permeability in the cuticles of fruit. Mouse Tango2 has been found to be expressed during early embryogenesis in mice. This protein contains a conserved NRDE motif. This gene has been characterized in Drosophila melanogaster and named as transport and Golgi organisation 2, hence the name Tango2.	3.11513e-70
NZ_CP032002.1\|WP_005086790.1\|463815_464625_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.49359e-22
NZ_CP032002.1\|WP_005086812.1\|448187_449684_-\|tripartite-tricarboxylate-transporter-permease	gnl\|CDD\|225870	COG3333, COG3333, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP032002.1\|WP_005088311.1\|440152_441040_-\|EamA-family-transporter	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	3.70216e-15
NZ_CP032002.1\|WP_008941218.1\|441808_443848_-\|M3-family-metallopeptidase	gnl\|CDD\|341051	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP). Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). This metal-binding M3A family also includes oligopeptidase A (OpdA; EC 3.4.24.70). DCP cleaves dipeptides off the C-termini of various peptides and proteins, the smallest substrate being N-blocked tripeptides and unblocked tetrapeptides. DCP from Escherichia coli is inhibited by the anti-hypertensive drug captopril, an inhibitor of the mammalian angiotensin converting enzyme (ACE, also called peptidyl dipeptidase A). OpdA may play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. It can also cleave N-acetyl-L-Ala. This family also includes Arabidopsis thaliana organellar oligopeptidase OOP (At5g65620), which plays a role in targeting peptide degradation in mitochondria and chloroplasts; it degrades peptide substrates that are between 8 to 23 amino acid residues, and shows a weak preference for hydrophobic residues (F/L) at the P1 position.	0
NZ_CP032002.1\|WP_004640990.1\|451753_452863_-\|porin	gnl\|CDD\|238208	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane. Individual 16-strand anti-parallel beta-barrels form a central pore, and trimerizes thru mainly hydrophobic interactions at the interface. Trimers are stabilized by hytrophillic clamping of Loop L2. Loop 3 bends into the pore, creating an elliptical constriction of about 7 x 11A, large enough to allow passage of a glucose molecule without steric hindrance. Removal of the C-terminal residue (usuallly F) destabilizes the trimer and removal of the 16th beta-sheet abolishes trimerization. Unlike typical membrane proteins, porins lack long hydrophobic stretches. Short turns are found at the smooth, periplasmic end, longer irregular loops are found at the rough, extracellular end. C-terminal residue forms salt bridge with N-terminus.	1.41649e-34
NZ_CP032002.1\|WP_004640968.1\|465668_466919_-\|YihY-family-inner-membrane-protein	gnl\|CDD\|179313	PRK01637, PRK01637, virulence factor BrkB family protein.	3.29727e-73
NZ_CP032002.1\|WP_005086808.1\|450238_451234_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|225722	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown].	1.32377e-99
NZ_CP032002.1\|WP_004640980.1\|461676_462174_+\|YcxB-family-protein	gnl\|CDD\|379553	pfam14317, YcxB, YcxB-like protein. The YcxB-like protein family includes the B. subtilis YcxB protein, which is a functionally uncharacterized transmembrane protein. This family of proteins is found in bacteria, and is approximately 60 amino acids in length.	9.76229e-06
NZ_CP032002.1\|WP_008941225.1\|462215_462857_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	3.05294e-71
NZ_CP032002.1\|WP_008941219.1\|444039_446478_-\|ribonuclease-R	gnl\|CDD\|273947	TIGR02063, Ribonuclease_R, ribonuclease R. This family consists of an exoribonuclease, ribonuclease R, also called VacB. It is one of the eight exoribonucleases reported in E. coli and is broadly distributed throughout the bacteria. In E. coli, double mutants of this protein and polynucleotide phosphorylase are not viable. Scoring between trusted and noise cutoffs to the model are shorter, divergent forms from the Chlamydiae, and divergent forms from the Campylobacterales (including Helicobacter pylori) and Leptospira interrogans. [Transcription, Degradation of RNA].	0
NZ_CP032002.1\|WP_008941222.1\|449698_450142_-\|tripartite-tricarboxylate-transporter-TctB-family-protein	gnl\|CDD\|377815	pfam07331, TctB, Tripartite tricarboxylate transporter TctB family. This family consists of several hypothetical bacterial proteins of around 150 residues in length. This family was formerly known as DUF1468.	4.55106e-07
NZ_CP032002.1\|WP_004640964.1\|467660_468473_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	7.61158e-125
NZ_CP032002.1\|WP_008941221.1\|447057_448122_-\|AbrB-family-transcriptional-regulator	gnl\|CDD\|377472	pfam05145, AbrB, Transition state regulatory protein AbrB. Bacillus subtilis respond to a multitude of environmental stimuli by using transcription factors called transition state regulators (TSRs). They play an essential role in cell survival by regulating spore formation, competence, and biofilm development. AbrB is one of the most known TSRs, acting as a pleotropic regulator for over 60 different genes where it directly binds to their promoter or regulatory regions. Many other genes are indirectly controlled by AbrB since it is a regulator of other regulatory proteins, including ScoC, Abh, SinR and SigH. Hence, AbrB is considered a global regulatory protein controlling processes such as Bacillus subtilis growth and cell division as well as production of extracellular degradative enzymes, nitrogen utilization and amino acid metabolism, motility, synthesis of antibiotics and their resistant determinants, development of competence, transport systems, oxidative stress response, phosphate metabolism, cell surface components and sporulation. AbrB is a tetramer consisting of identical 94 residue monomers. Its DNA-binding function resides solely in the N-terminal domain (AbrBN) of 53 residues. Although it does not recognize a well-defined DNA base-pairing sequence, instead, it appears to target a very weak pseudo consensus nucleotide sequence, TGGNA-5bp-TGGNA, which allows it to be rather promiscuous in binding. The N-terminal domains of very similar sequences are present in two more Bacillus subtilis proteins, Abh and SpoVT. Mutagenesis studies suggest that the role of the C-terminal domain is in forming multimers.	1.0979e-68
NZ_CP032002.1\|WP_005086820.1\|441563_441770_-\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|312883	pfam09526, DUF2387, Probable metal-binding protein (DUF2387). Members of this family are small proteins, about 70 residues in length, with a basic triplet near the N-terminus and a probable metal-binding motif CPXCX(18)CXXC. Members are found in various proteobacteria.	3.33363e-10

>NZ_CP032002.1|WP_004640990.1|451753_452863_-|porin
MKVNFLIASILTVITSSAIAAPKIYGEIDASLDYLPENNAAKSDRDVWKVNSNSSFLGIKGEEKLTERLSAIYQIEWSFNADGDGTDWSQRDRFVGLKDQKLGTLKIGKNNSPLKKLSTAVDSFNNYVRNTADITSIMPGENRINNSVVYDSPKFSIGEQGNLEFSALLATGEAQGIRNNQGGVTVDGGGLGDAWSTSLTYSDPIFLAAIAYDKAIPSNLLGQGFLNASDTHIDIDKVFAAANTLRLTARIKPIETLSLKALIQKSEIEEAKGNPASAANIDDSVGWLIGAEYRIPNHDKWNIKAQYSQNTTSFKNNDADYDAQQIMAGVDYAFNKQVRAYGYTGYATFKQADAKDKQPVVGTGLEFKF
>NZ_CP032002.1|WP_005086808.1|450238_451234_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MLRGIILTSTLVTLGFGLTACGKNKGEVGEPKRPECIAPAKPGGGFDLTCKLAQNAFKETKLLNSPMRVTYMPGGVGAVAYNKIVANDPANDNAIVAFSTGSLLNLAQGKFGQYTEKDVRWLAIVGTDYGVVAVNAESPYKNLNDLVAALKKNPKSVSFGAGGSVGGQDWMQTAMLAKAAGVNPKDMTYIALEGGGEAVTSVLGNHIQVVSAGIAEVIPHIKSGKVRALAVFAPERLPNELANIPTAKEQGYDIQWPVVRGYYVGPKVSDEAYQWWKTSFEKMMQDPKFEQSRQQFELLPLSMTGEELDQFVIQQTNQLRALSKEFDLVTK
>NZ_CP032002.1|WP_008941222.1|449698_450142_-|tripartite-tricarboxylate-transporter-TctB-family-protein
MSAERIFSGTLGLVSLGLLYLAWGYVAPIAYDPLGPRPYPVLLLLLLISCCLYLTFRPRKLAEFIDLGYTPSVLKKIGLLMLFMLIYAVTFEFLGFPIATAIMFFLVGTLFGGSLKASLITGIVFGCLLYGLFDYILDVPLPLGFFS
>NZ_CP032002.1|WP_005086812.1|448187_449684_-|tripartite-tricarboxylate-transporter-permease
MDVFEYLMYGFQVALTPQNLFIALIGAFIGTIVGLLPGLGPINGVALLLPFAYALGLPPESALILLAAVYLGCEYGGRISAILINVPGDAAAIMSTMDGYPLAKQGKAGIALSLSAMSSFIGSLIAIIGIVLFAPLLAKWAIVFGPAEYFVLMVFALTCLSGLVGDQPIKTAVAALIGLLFATVGVDAVTGVYRFTFDSVNLSDGVQFTTIVIGFFSISEILIMLEKTAIGQKALGQGKRSLFNLKEFLFTLKTTIRSSLLGFIVGILPGAGATIASAMSYTSERKLAGKDGKFGDGDLRGIAAPEAANNASACGSFIPMLTLGVPGSGTTAVMLGALTLYNITPGPQLFTEQPTIVWGLIASLFIASILLLIMNISLVRFFAKLLSVPNFILLPAIAAVSFVGVYAIHSTVFDLVLMVGLGIFGYILRKLNFPLSALILGFVLGELMESSLRRALSISQGELSILFDGYITKVLWILAGIMIVLPLIRWLRNRHRAI
>NZ_CP032002.1|WP_008941221.1|447057_448122_-|AbrB-family-transcriptional-regulator
MQLYLKYALSLSLAFLGALVAQWLHLPIPWLLGPLFTTALLKINHAPIECHNSARSIGLSIIGLTLGLYFTPEMIHLIASHWLVLLIGLLFALLLGAIGAFILQRWAKVDFKTAWFASAIGGANEMSHLAEHYQARVDQVASAHTLRVLMVVVIVPFFYQFMGWHGFDTDQIAKHLEVNWFGFFSLVLISYIASRIFIQFKLPNPWTFGALLVAIFFTAQDIHLSAIPTPIIHLGQVLLGWSLGNKFKPGFFKTAPRYLSIVALCNLGALFLTGLLAYTLMQWTDLPIATLGLGLAPGGVAEMTITAKVLQLGVPIVTAFHVVRMVGVLGTVGYLYLFFDKILQKKIQTQKNRN
>NZ_CP032002.1|WP_008941219.1|444039_446478_-|ribonuclease-R
MTTNWVDPEAKAEAERYDNPIPSRTLILTTLEQLKTAQSHAELVEHFNIQDQKSIDALNHRLSAMVRDGQLMKDGFKYQPSTDAPSYEATVYINSKGLGTANIAGQDDVLLPERELRLVFNGDRVKVRQTSVDRKGKAWGFITEVVQRRVKQIIGKVAEHQGEYFIQPSNPNQHQPITLEKELIEHANAKVGDMLRVAIDDYPTREELATGHVVQSMADKADTEIIIPQTILEFGLPYEFPEAVIKEAESFKEPSAQDIKNRVDLRDLPLVTIDGEDARDFDDAVYAEKRPGGGYRVVVAIADVSHYVRLESPLNEEAEDRGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLKLSRAGKVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPEDKTIHKSLNTLFQLYQTLKGLRAERHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYCLEHDIPMLYRVHEAPEFSRIQKVRDFVKLLGLPFPEQPTQADYQRVIEATKDRLDAPSIHAVLLRSMMQAYYGAKNSGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAYLQQKPYPLSGAALDDAGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFVGVISAVTEFGLFVTLKDLYVDGMIHVSQLGEDFFLYDQASQSLIGQNRGQSFSLGDEVKIQVAGVNLEERKIDFQLVQQLTHLGRVIRQKAPRTANPSSSNRASTTEEVFGKAPSSTKAKVSEDGEKPVRKKKDKNKPSSYSKKPAKKASAKPDTKEKAKKKVKKKKSNAKAKAE
>NZ_CP032002.1|WP_008941218.1|441808_443848_-|M3-family-metallopeptidase
MTLQQATLPTPQFNQIQLADLKQQIESTIQNGQNFLNQLNEAPQDIEAQLATLTEVDQLENNMSESWGILSHLNAVMNNAETREVYQSLLPSLSEYYTQLGQHTALYQTYQQIHDSAAFQSLSEAQQSAIKLALRDFKLSGVALEGEAKKRYAEISARLSQLSSDFSNHVLDATQAYFKALTEEQLKGLPQSSIELLKQYGQQRELDQAVATLDFPAYFAIMTYADDRELREELYKAYVTRASEQSDKTEFDNTPVMEEILSLRQEMAQLLGFNNFAEYSLASKMAPNVETVDKFLVDLAEHARTPALAEIAELKAIAQQDGIEELKPWDATYYSEKLKQQQFNLSQEALKPYFPAPKVVDGLFQIVQRLYGIQIVERQAPVWQNDVRYFEIEDQGQVVGGFYFDLYARNGKRGGAWMSGFRSRVQTTNGLQKPICYMVCNFTPPIGDQPALLTHDEVITLFHEFGHGLHHMLTEVDNISVAGTHGVAWDAVELPSQFMEFWAWDNESLDVLSEHIETKQTLPQELLTALLNARFFQSGMQTLRQIEFALFDLTIHRQSPALNSEQIQATLDDIRAKFSVVPTVAYNRFQHSFSHIFAGGYAAGYYSYKWAEVLASDAFDRFENEGIFNTETGKEFRKFILAVGGKDTALDAFRNFRKREPKIDALLRHQGWTKTDKTA
>NZ_CP032002.1|WP_005086820.1|441563_441770_-|YheV-family-putative-metal-binding-protein
MKRQFIAGAKCPKCGALDRVVKIITVDDEWIECIECAYSEKRPTHVEESQPAEPDEIGVIQFKPRHFD
>NZ_CP032002.1|WP_005086822.1|441101_441551_-|hypothetical-protein
MTSPAQTSNSKLLWMIIGGISLVVLIFFTAQWLLSNHTAETETAVSQPHPVTTSLENVEAASAAMMSHVNEESDPAPIQLVEESILKAAVPNNESLAKEEIAKLDDIQHQLKDQKQELQAQHHDADTLIKLKEEQIKLLEAQLLQTQAS
>NZ_CP032002.1|WP_005088311.1|440152_441040_-|EamA-family-transporter
MPIVSQRHPVVLAIACLTFSAFLFSLMGICIRFASHTIDNYTIVFFRNLVGLILFLPFIYRQGTDFVKTEKIWMHTWRSIIGLAAMYGFFYAIAHLELSNAMVFTYSSPIFIPFIAWLFLKERISTLMLCAAALGFIGVFFVAKPDQGLLNWLSIIGITSSLCAAMAFVTVRALTQTEPPERIVFYFCFIGALLSGIPMFWVWRPYQLEELFFLIAAGVLANVSQLFMSHAYRLAPAGQIAPINYVAIIFAGIWGFLLWHELPDTYSLIGFGFILIAIFLCSPLTQTYKKWRFKL
>NZ_CP032002.1|WP_008941224.1|460225_461521_-|hypothetical-protein
MSRFITLFTIFLYCSIQYSFAQLITWSDNIPSAIQPFQNQPKTLASYTQNDIFIYGHPAVKTSVPTLKNNPQPTANFTTAAMIVPVNAQQVEKTLTDFHQYVGLFPTLKSAKTLAQSGNITQMKYRVSIPTPIPVLNFNENIIMQHQLTENSISTLVIDAPIPYGVGKFEWFALDENRTLITLTQWGDLNQPQGFLVKKILAAIPEVKLGIPSSGSAFILESLRTRFNTLTPIALPAGQTPSPQLTPAQLVKIAQLSQAAQQPVSFLHSPTTIAYTHGRESMRFTTTYQFYKQSPQQLQKWLAPVTYKELFPRQIKKVSTTPIQNQSQDADIQVNVSLGVINIPFAFKLQFNYPQTTENNFHANGGDLRYIKGRMQINTVNQGSLFKMTTAMKIDEKAPFLLRAMRSLPYHDTLPAVGGNTVFVQKIRTKL
>NZ_CP032002.1|WP_004640980.1|461676_462174_+|YcxB-family-protein
MSEQRPTISARFYLNLEESQDGFALVTFGKKPITRFLTPAISIAIILWGIYLGFTGVGRYYVALGVFFLIMQAIMRFWLLPLLFKRQFVRYQFGKSEQGIDLYQDYFELYAAGKKQKAQYSEVQSFVIGKLTYMLELKNQTVVIVPKRVFTNPADQNKFENSFKK
>NZ_CP032002.1|WP_008941225.1|462215_462857_+|fumarylacetoacetate-hydrolase-family-protein
MNTQPSKIVCVGRNYAEHAKELGNAVPDRPILFMKPPSSLATLAQGVAWNQALGECHYECEICLQIAHPLSQEIDKNKALEAIGAITLGLDLTLRDLQSELKNKGQPWERAKAFDGACILADWIEADEIGDLQELELVLMINGEQRQHGFSRDMLFDIGALLVEINQSFSLQAGDVIMTGTPAGVGALNPNDQLTMKLITQSGEYDWDTFVKA
>NZ_CP032002.1|WP_005086792.1|462927_463824_+|polysaccharide-deacetylase-family-protein
MKIGLYLTLFLITSFVHAKQLALSFDDGVNPDLNVQALTINQHILEQLHQHRIKSIIYPSVIKIGDYAGVQLVAEWGKQGHQIGNHSEFHLNLNKDSISSQQYIDGIRRAEQVFQPLQGWVARYRYPFLKEGNTQEKRDAVVGYLKQHDYQSGAVSIDASDWFYNQKYLSYQKHHQSDQLEKLKQAYIYHLLDRADYYDQLAIDTIGYSPKHVLLLHVNAINAAFLDDVVLAFQQQGWQWIDSEKAYTDPLYQLSSTVLPAGESIIWSLAKQQGHADLRYPAEDAPYEQENLKRYGLL
>NZ_CP032002.1|WP_005086790.1|463815_464625_-|helix-turn-helix-transcriptional-regulator
MKKSAHRIQDFQELPACDDIPASLWLRIRDAPAETFYPKHAHAWGEFIYTFDGVLEVSIDQIHYLTPPPYGIWLPPHLQHSGINRHEVTHCILYVHENLCQNMPQQAGILLTAPLVPALLEHIRKHPFSEQDPEYLRLLQVLLDALTHAELVGSYLPTTQHPALSKILSHLHAYPADNSTLQQLAEMINMTERTLARYSQKELGMSLHEWRQRLKVMKAMSMLNQGKTIENIALDLGYASSSAFIYMFKRWMHFTPDQFRKLYQGSSLQ
>NZ_CP032002.1|WP_008941226.1|464732_465641_+|DMT-family-transporter
MDERKTLDARASGLMIGLCMIWGLQQVILKMAAPDISPLMQIALRSGLAAILLLPLLYLDKAAELFNRQNLQAGALVAFLFSLEFFLLAQALQWTSASHAVVLLYTAPIFVALGLHWKLPAERLSWLQWSGIALAFIGIVVTFIREQSGTASAIEQQMLWGDLLALAAGIAWAATTITVRLSSLAQAAVTQTLFYQLAGSFILLFGLAVFLGQASIHFTPLVIGSLAFHTLVVSFASFLAWFWLLRNYLASRLGVFSFLTPLFGIIFGVWLLDERIEPNFVLGSILVLAGIVVVSLQGWLRK
>NZ_CP032002.1|WP_004640968.1|465668_466919_-|YihY-family-inner-membrane-protein
MILNRYLKKLNFLEKTWFQFIVFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPARQQLQQLIYSNFLPKSTIAFDKALSAFTDKSSNLTIIGILFLFVTTVLMLSSIENVFNRIWRVKETRTGLVGFMRYWTIISLGPILLGSAFVLSSTVASMNILSNNFAGYQLNGAFLLWLISFLLTIIGFFILYWTIPNRNVPIYSAMIAACFSATVFEVLKRLFGWIMSNFTSYEIVYGAFAAVPIFLLWIFLSWNIILLGVEISYALTAFHSGKEQKRHPIMMLLDILELFYKKQQVGNSVSEHELLDIVGRGELGRLPSYILQLEAQNLIKRTDNDEYVLVRNLAQVDFWSFFTALPYPLPLRDDVANVHADDEWMEKIGPALIESNDYLAAKLSIPLSTIFEQK
>NZ_CP032002.1|WP_004640966.1|467034_467625_+|NAD(P)H:quinone-oxidoreductase
MQPYVLVLYYSKYGSTRQMAHLIADGIESAGVNARIRTVPNLATVVTEAQPSIPADGDIYCSLDDLAHCSGLALGSPTRFGNMASEMKYFWDQTTSLWLNGALHNKPACVFTSSGSMHGGQESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPYGASHVSGPRHDQSLSQDEKILCEAQGKRLGELVKKLI
>NZ_CP032002.1|WP_004640964.1|467660_468473_-|prolipoprotein-diacylglyceryl-transferase
MLTYPNIDPVALSLGPVQVHWYGLMYLLAFLCAWGLASYRAKQRDGWTGDMVSDLVFYGALGVVLGGRVGYVLFYEFGKFLENPLWLFQVWTGGMSFHGGFLGVMIAMLFWCKKYQKTWFQTLDFIAPCVPTGLMFGRIGNFIGGELYGRQVQDPSYPFGMIFPTDPLGLVRHPSQIYQALCEGLLLFIILWWFSSKPRPRMAVSAVFLVGYGVARFFMEFFRQPDADQGFILFGWMTKGQILSFPMIIIGLWMIWYAYRKNIYDWQLKK
>NZ_CP032002.1|WP_115736360.1|468579_469362_+|NRDE-family-protein
MCIVAFAWHVLEDMPLCLISNRDEFYHRPSACLHAWENSSIIAGQDLQSGGTWMGITASGRWAIVTNFRNGRDKNQYQTSRGHLIQTFLESDLTPIRFAQQLELKQQEYAGFNLFVGDREQAVYMSNRGEAPQVLANGVYVVSNGLMSEDWEKTKHLRKRFTQEFLPMLQQSNITETALHSTVWDILEDERKVILDLLPDTGINAEMEALLSSTFIQSPIYGTRCSNFLRMRQQQWLWTEKAQQGEQQGEIVEQKISLLK

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Crispr_ID: NZ_CP032002_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032002_3

940659-940739

Orphan

Consensus_repeat	Method
AAATCTTTGTGCAACAAAGCCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032002_3

>merge|NZ_CP032002|3|940659-940739|CRISPRCasFinder
AAATCTTTGTGCAACAAAGCCCTTGAATTCTGTTCAAATGAGCAGAGTGTTATCTTTTAAATCTTTGTGCAACAAAGCCTC

>NZ_CP032002|3|1|940659-940739|CRISPRCasFinder
AAATCTTTGTGCAACAAAGCCCT	TGAATTCTGTTCAAATGAGCAGAGTGTTATCTTTT
AAATCTTTGTGCAACAAAGCCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032002.1\|WP_160124203.1\|943171_944497_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032002.1\|WP_160124202.1\|942018_942744_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378924
NZ_CP032002.1\|WP_160124201.1\|940830_941991_+\|outer-membrane-protein-transport-protein	unknown	unknown	gnl\|CDD\|367457
NZ_CP032002.1\|WP_125317013.1\|937497_938913_+\|anthranilate-1,2-dioxygenase-large-subunit	unknown	unknown	gnl\|CDD\|132272
NZ_CP032002.1\|WP_005243577.1\|951634_951922_-\|DUF2591-family-protein	unknown	unknown	gnl\|CDD\|378193
NZ_CP032002.1\|WP_005243610.1\|946952_947591_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_005243575.1\|951933_952137_-\|exodeoxyribonuclease-VII	unknown	unknown	unknown
NZ_CP032002.1\|WP_005243607.1\|949142_950495_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NZ_CP032002.1\|WP_004880447.1\|929902_930799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_004880446.1\|930902_931175_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_160124200.1\|945051_946196_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP032002.1\|WP_125317014.1\|938915_939407_+\|anthranilate-1,2-dioxygenase-small-subunit	unknown	unknown	gnl\|CDD\|132275
NZ_CP032002.1\|WP_125317011.1\|932138_932519_-\|copper-resistance-protein-CopC	unknown	unknown	gnl\|CDD\|377255
NZ_CP032002.1\|WP_160124351.1\|931189_932071_-\|CopD-family-protein	unknown	unknown	gnl\|CDD\|224195
NZ_CP032002.1\|WP_125317012.1\|934036_935112_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP032002.1\|WP_005243609.1\|947671_948979_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|162098
NZ_CP032002.1\|WP_160124200.1\|932668_933813_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP032002.1\|WP_005243591.1\|950497_951418_-\|chromate-resistance-protein	unknown	unknown	gnl\|CDD\|378257
NZ_CP032002.1\|WP_125317040.1\|935822_936806_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP032002.1\|WP_125317015.1\|939417_940449_+\|anthranilate-1,2-dioxygenase-electron-transfer-component-AntC	unknown	unknown	gnl\|CDD\|183350

Protein	Function_ID	Function_description	E-value
NZ_CP032002.1\|WP_160124203.1\|943171_944497_+\|ISNCY-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.13779e-07
NZ_CP032002.1\|WP_160124202.1\|942018_942744_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|378924	pfam12697, Abhydrolase_6, Alpha/beta hydrolase family. This family contains alpha/beta hydrolase enzymes of diverse specificity.	2.23087e-12
NZ_CP032002.1\|WP_160124201.1\|940830_941991_+\|outer-membrane-protein-transport-protein	gnl\|CDD\|367457	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.	2.29175e-15
NZ_CP032002.1\|WP_125317013.1\|937497_938913_+\|anthranilate-1,2-dioxygenase-large-subunit	gnl\|CDD\|132272	TIGR03228, anthran_1_2_A, anthranilate 1,2-dioxygenase, large subunit. Anthranilate (2-aminobenzoate) is an intermediate of tryptophan (Trp) biosynthesis and degradation. Members of this family are the large subunit of anthranilate 1,2-dioxygenase, which acts in Trp degradation by converting anthranilate to catechol. Closely related paralogs typically are the benzoate 1,2-dioxygenase large subunit, among the larger set of ring-hydroxylating dioxygenases. [Energy metabolism, Amino acids and amines].	0
NZ_CP032002.1\|WP_005243607.1\|949142_950495_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	6.26099e-59
NZ_CP032002.1\|WP_005243577.1\|951634_951922_-\|DUF2591-family-protein	gnl\|CDD\|378193	pfam09508, Lact_bio_phlase, Lacto-N-biose phosphorylase N-terminal TIM barrel domain. The gene which codes for this protein in gut-bacteria is located in a novel putative operon for galactose metabolism. The protein appears to be a carbohydrate-processing phosphorolytic enzyme (EC:2.4.1.211), unlike either glycoside hydrolases or glycoside lyase. Intestinal colonisation by bifidobacteria is important for human health, especially in pediatrics, because colonisation seems to prevent infection by some pathogenic bacteria that cause diarrhoea or other illnesses. The operon seems to be involved in intestinal colonisation by bifidobacteria mediated by metabolism of mucin sugars. In addition, it may also resolve the question of the nature of the bifidus factor in human milk as the lacto-N-biose structure found in milk oligosaccharides.	0.00275758
NZ_CP032002.1\|WP_160124200.1\|945051_946196_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.4918e-40
NZ_CP032002.1\|WP_125317014.1\|938915_939407_+\|anthranilate-1,2-dioxygenase-small-subunit	gnl\|CDD\|132275	TIGR03231, anthran_1_2_B, anthranilate 1,2-dioxygenase, small subunit. Anthranilate (2-aminobenzoate) is an intermediate of tryptophan (Trp) biosynthesis and degradation. Members of this family are the small subunit of anthranilate 1,2-dioxygenase, which acts in Trp degradation by converting anthranilate to catechol. Closely related paralogs typically are the benzoate 1,2-dioxygenase small subunit, among the larger set of ring-hydroxylating dioxygenases. [Energy metabolism, Amino acids and amines].	3.03538e-94
NZ_CP032002.1\|WP_125317011.1\|932138_932519_-\|copper-resistance-protein-CopC	gnl\|CDD\|377255	pfam04234, CopC, CopC domain. CopC is a bacterial blue copper protein that binds 1 atom of copper per protein molecule. Along with CopA, CopC mediates copper resistance by sequestration of copper in the periplasm.	1.07432e-21
NZ_CP032002.1\|WP_160124351.1\|931189_932071_-\|CopD-family-protein	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	5.30049e-13
NZ_CP032002.1\|WP_125317012.1\|934036_935112_+\|IS3-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	2.12735e-28
NZ_CP032002.1\|WP_005243609.1\|947671_948979_+\|MFS-transporter	gnl\|CDD\|162098	TIGR00900, multidrug_transporter, H+ Antiporter protein. [Transport and binding proteins, Cations and iron carrying compounds].	7.39072e-80
NZ_CP032002.1\|WP_160124200.1\|932668_933813_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.4918e-40
NZ_CP032002.1\|WP_005243591.1\|950497_951418_-\|chromate-resistance-protein	gnl\|CDD\|378257	pfam09828, Chrome_Resist, Chromate resistance exported protein. Members of this family of bacterial proteins, are involved in the reduction of chromate accumulation and are essential for chromate resistance.	5.64577e-59
NZ_CP032002.1\|WP_125317040.1\|935822_936806_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	5.08178e-18
NZ_CP032002.1\|WP_125317015.1\|939417_940449_+\|anthranilate-1,2-dioxygenase-electron-transfer-component-AntC	gnl\|CDD\|183350	PRK11872, antC, anthranilate 1,2-dioxygenase electron transfer component AntC.	0

>NZ_CP032002.1|WP_125317015.1|939417_940449_+|anthranilate-1,2-dioxygenase-electron-transfer-component-AntC
MGHSVALNFADGKTFFISVNQDELLLDAAVRQGIKLPLDCREGVCGTCQGQCETGMYAQDYVDEDALTERDLTERKMLACQTRVQSDAAFYFDHDSSICNAGEGLSIATTVTAVELVSETTAILHLDASSFKSQLQYLPGQYARLQIPETEDWRSYSFANRPNANNQLQFLIRLLPDGVMSNYLRERCQIGQTLLIEAPLGSFYLREVQRPLVFVAGGTGLSAFLGMLDNLVEQPDTPPIQLYYGVNTESDLCEQQRLHAYGEQFPNFSYHPIVTKASETWQGKAGFIHEHLNKDQLAEQAFDMYLCGPPPMVEAVKSWLDEHDLQDYRLYSEKFLQSNTERA
>NZ_CP032002.1|WP_125317014.1|938915_939407_+|anthranilate-1,2-dioxygenase-small-subunit
MSQELQFAVSQFLYKKSEFCDKYDWDAYLDLYDEDSEYHIPQWIDDHNYVQDPNQGLSYIYYPDRSGLEDRVFRIRTGKAASASPLPRTFHSINNVQVHTREDGLVEAKVAWHTLYNRQGLEGAFYGHATYLLRPTEQSFKIRRQHSILLNDKIDSVLDFYHV
>NZ_CP032002.1|WP_125317013.1|937497_938913_+|anthranilate-1,2-dioxygenase-large-subunit
MTSSNLQQWNDLVDGCIDFRPQDGVFRVARDMFTQPELFDLEMEFIFEKVWIYACHESEIPNKHDFLTVQIGRQPIIVSRDGNGELHAMVNACEHRGATLTRVAKGNQSTFTCPFHAWCYKSDGRLVKVKAPNEYCEDFDKSTRGLKQGRIESYRGFVFVSLDTQATDSLEEFLGDAKIFLDLMVNQSPTGELEVLQGKSTYTFAGNWKLQNENGLDGYHVSTVHYNYVSTVQHRQQVNAAKGGEMDTLDYSKLGAGDAETDDGWFSFKNGHTVLFSDMPNPAVRPGYETVMPYMQEKYGQKYAEWAMHRLRNLNLYPSLFFMDQISSQLRIVRPVAWNKTELISLCIGVKGESEQARRNRIRQFEDFFNVSGLGTPDDLVEFREQQKGFQARLERWSDISRGYHAWEYGPTKNSIDLGIEPVITGREFTHEGLYVNQHGHWQRLMLDGFKKKSLKMLDITFQNQNQMDEV
>NZ_CP032002.1|WP_125317040.1|935822_936806_-|AraC-family-transcriptional-regulator
MISLSQDMNLNHQSSQADFAQSLMSSICGEHFLDTSSRDSLDFHYEGLILPNKQLTIGKIYYGANVSIQTKNLKAYSISLPFQGKQQLTTRGKKYLSTTNKGLILSNSDLQNLEIDKDCKKYQVIIPERSIQLVLNELTDQNNINPVIFNPEMDIEYCVELNLWWKYIDTFLEFRTRHNGLQLWAENYEKFIIKTLLLSQENNYSTLLKSLCENKEPCYLLKVRNYIKSHAHENIQADDLYKLSGVSKTKLYNEFYNYYGTTPISFLKKYRLQQIHRTLCSSKNDKLSISKLALDWGFNHLGRFSQEYREEFGENPSDTRKKYLNLF
>NZ_CP032002.1|WP_125317012.1|934036_935112_+|IS3-family-transposase
MKTSKFTDSQIMSILKQAESGTPIATLCREHGMSNATFYKWRAKYGGMDASLITRLKELEAENAKLKKMYAEERLKAEIIQEAMFKKVVKPSCRRQMAQHAVARHAVSIRLACSAFGISETCYRYQAKLSDDNALIAEQLIELTEENSDWGFGLCFSYLRHVENHCWNHKRVYRIYCELALNLRIKPRRKLKRHAPEPLKEPIRENQVWSLDFMHDQLSDGRKFRLLNVIDDYRREGLAIEAGFSLPTIRVIRTLNQLLEWREKPLVIRCDNGPEFISHEFVRWATEQGIRIEYIQPGKPQQNAYIERYNRTIRYSWLSKHLFDTLEEVQDYATSWLWHYNHERPHQANKGRPPLMAA
>NZ_CP032002.1|WP_160124200.1|932668_933813_+|IS3-family-transposase
MEYFMTRRPRRNHSNDFKAKVALAAIKAEKTLAELSAEFDVHQNQIIDWKNQLISASSQAFDQSKAPTEPPIDLKKLHAKIGEQALEIGFFRRCVEETGPLQPQKLIDDSLQISVSKQAKLLKVSRGCYYYRPKPVSESDLKLMRCMDELHMQYPFAGSRMMRDLLNRQGHHIGRRHTRTLMKKMGIQALYCKPNLSQANQAHRKYPYLLKGLAILRSNQVWSTDITYIPMAKGFVYLCAVIDWHSRKVLAHRVSISMDVDFCISVLNEAIEKYGSPEILNTDQGSQFTSDAFIDVLKSNGIQISMDGKGRWIDNVMVERLWRSVKYEEVYLKAYSSVTDAKKQLSAYFEFYNLKRPHSSLDKMTPDEFYYDQLPQQNKVA
>NZ_CP032002.1|WP_125317011.1|932138_932519_-|copper-resistance-protein-CopC
MKIFQNKVSVLRNVLVGATMVVAASSAFAHVKLESATPAINASVASQPQNITLNFGEEVMLMNVKLLDAQRKDISLNYKITHDMKKSFEVAVPKLKKGKYTVVWTTMGADGHNMNGEYNFTLKAAK
>NZ_CP032002.1|WP_160124351.1|931189_932071_-|CopD-family-protein
MLPETWIYATWLAKIVLYLGIAFVVGGAFCYFLLGRYVEIKQTILKYITIGAGLGLISSILGFFLLIGSFANTGLYGMWDSNYINILINTPTGHVHIIRSISFALLLLLMIIKLSKGTTQVSKIEGVIFLILLTPIVFSFSQLGHVTNLPLFAQFLLSIHVLVMSLWMGSLYPLWRTSKKITGLPLKERMHLFGRIAAFVVGILIACGLSIALLLFKDFNTLINTPYGHGFIIKILFVLSILLLAAFNKWYFTPRLQDPKFAKQLGYAILFEMSLGLSILLATGYITTVVGIE
>NZ_CP032002.1|WP_004880446.1|930902_931175_-|hypothetical-protein
MTSWMKYNLLFLIFLNTISWAEPSTSKTIRSLDDTDLRNITDHNHGDTKVDENKDDHHSKDKQLRNEDSRQQKVINGLMLQKPNVLPPSK
>NZ_CP032002.1|WP_004880447.1|929902_930799_+|hypothetical-protein
MIKGLAITPPVLGRISIGKIVEKNGKRVPEKDDQFTITSQIQGKDGWIKHPLDEQLRAKAPNQKLRTIPVRMIFNDPELSLRAEYSLFDRQTGRLICSGNGETCQRLGQNGIEQHPCPSPDLCPLAQGGLCKPYGRLYVNLDESDEFGTFIFRTTGFNSIRTLAARLRYYSSASGDLLSCLPLQLTLRGKSTTQSYRTPIYYVDLTLRDGVNLQEAISNAKQISEQSKAAGFYQEALDQVARIGYGNASFEVGGEEGMDIVEEFYTEDSKPEQRKQTHDLNHVQDIQKGLQQSVQALN
>NZ_CP032002.1|WP_160124201.1|940830_941991_+|outer-membrane-protein-transport-protein
MQVRKILYAILILKIPSAYAFNGVYLTGSGAVSAATGGVSLASGFDRMSISDNPANLSWQSDGADLQLSLLNVKSKAIVSNQPDEFKSSVYIPIPGLAIAKKYDDKLSYGVSVIGAGASVNYKEAAIHDYPADDAKDNLAMSVISPALSYKVLPNLSLGLAINLGAQQFRAKGVLVGEDVSGNPLFLPSHGNQWAYGYGATIGTTWNAQPDWSVAASYTTETKFSKLDEYKDDLLASSSGHINLPEKYGIGTKYSFNDRLKIGLDYLRINWSAAKGFGKDGAFQWKDQHVYRIGTEFQLDSVSSLRFGYSYATDFLNTDYTNVNFYANAISHESVTFGYGRQFKNFNLNLAYEYAFNNTQNGTSFSTGTNLANNNHVVTLGLSKNF
>NZ_CP032002.1|WP_160124202.1|942018_942744_+|alpha/beta-fold-hydrolase
MSTYVLVHGSWHDGSLWAPVAENLRAQGITVYTPTVAGHGVNVDRNVNHAQCSQSIVEYIIEHDLKDFVLIGHSYGGTIISKVAEAVPERIRRLVYWNAFVLLDGQSLLDNVPPNLKDVFTSIAQASDDNCVRLPFPVWRDSFLNDADYETCKRTYELLTPEPFQPFADKLDLKKFYTLDIPKSYLNCTEDTALPHGEWSWHPRMSSRLGHFRLVQMPGSHEVMFSNPALLAKKMIEAGRD
>NZ_CP032002.1|WP_160124203.1|943171_944497_+|ISNCY-family-transposase
MSDKELKRLSVLQEICDQRITQSQTAQLLHISERQIRRLLQKYKAQGPSALAHAGRGQISNSKLPEELRLKCLNIVSDQLHGFGPTLAHEKLTTVHGFDLSVETLRSWMIAADLWMPRSKRLKRPYQPRYNRDCFGELIQIDGSHHDWFEGRAAKCCLLVFIDDATGKLQHLRFCESESTFDYMLSTRAYIEQYGKPLAFYSDKHSVFRVNQSSKKDTKMTQFGRVLSTLNIDIIFANSQQAKGRVERANRTLQDRLIKEMRLKGICSIEQANAWLPCFIEQFNQKFAKMAFNPKNLHRPITETAEELDDIFTWREPRRVTNNLTITYDKCVYLLENTEENQRLIGKYLEFLEYPYGTVAIMHNSRKINYSLFDKLSQLNQREIVENKRLGAVLNHIQQQHEELEQQNKRNRSQKMPSRRAQKTAIQERNLNSVLDLEMSI
>NZ_CP032002.1|WP_160124200.1|945051_946196_-|IS3-family-transposase
MEYFMTRRPRRNHSNDFKAKVALAAIKAEKTLAELSAEFDVHQNQIIDWKNQLISASSQAFDQSKAPTEPPIDLKKLHAKIGEQALEIGFFRRCVEETGPLQPQKLIDDSLQISVSKQAKLLKVSRGCYYYRPKPVSESDLKLMRCMDELHMQYPFAGSRMMRDLLNRQGHHIGRRHTRTLMKKMGIQALYCKPNLSQANQAHRKYPYLLKGLAILRSNQVWSTDITYIPMAKGFVYLCAVIDWHSRKVLAHRVSISMDVDFCISVLNEAIEKYGSPEILNTDQGSQFTSDAFIDVLKSNGIQISMDGKGRWIDNVMVERLWRSVKYEEVYLKAYSSVTDAKKQLSAYFEFYNLKRPHSSLDKMTPDEFYYDQLPQQNKVA
>NZ_CP032002.1|WP_005243610.1|946952_947591_+|hypothetical-protein
MYNAEIPKDIELPSSKKLIKSTAIAAVSAVVVLVTCVMPAEYAIDLTGMGKVLGLTKMGEIKQSLAQESENGINAEQTVNSVEQISVKTSTQTATDNTQMVMPAINKESISIELKPDQATEVKLTMPQSASVNFDWKAVGGGLNYDTHGDPVNAPKGFYHGYGKGKNETTQQGVLKAAFDGKHGWFWRNRTENPVTVTLLVEGQFSEMKKVF
>NZ_CP032002.1|WP_005243609.1|947671_948979_+|MFS-transporter
MLEVLKNTTYRHLFLAQVIALIGTGLITIALALQAYDIAKGEAAQVLGIALAIKMIAYIGVAPIASAFAERLPRKQVLVGLDVIRALTALCLPFVTQIWQIYILIFILQSASAAFTPTFQAMIPDVLPEEKDYTNALSLSRLAYDLENIISPMLAGFLLTVMSYHNLFLGTVLGFIGSALFVVSAKLPVAKVPEFRGVYSRIKQGAKIYFNTPRLKALLALNLAIASASAVVIVNTVVLVQSTFKLTENATTWAFGLFGLGSMLSAFVLPRILDKFSDRSVMLTGTTILVIGLFSGSLIASYNGLLALWFVLGIGYSVSQTPTGRLIRKSASSENRTSLFAAQFAFSHACWLITYPLVGWLSTNIGTLQTFIPMAVIAMIALTLALRLWPKNDEDFLPHSHDDLPADHEHLVQHQIDGVHVHAYVIDDYHQKWPK
>NZ_CP032002.1|WP_005243607.1|949142_950495_-|chromate-efflux-transporter
MEQELITPPEPEIQPVSFWQAFLFWLKLGFISFGGPAGQIAVMHQELVEQKRWISEKRFLHALNYCMLLPGPEAQQLATYIGWLMHRTVGGLVAGILFVLPSLFILIALSWIYVKFGDVPIIAGLFYGIKPAVVAIVFHATHRIGSRSLKNKFLWAIAALAFIAIFFFNLPFPLIVLSAAIIGYLTSKKYPTLFSGGNSHKQSKKDYGRALIDDDTPTPEHAIFSWKRLGSILLIGGLLWFIPIISLSLTLGWDHSYTQMAWFFTKAALLTFGGAYAVLPYVYQGAVNFYGWLSPTQMIDGLALGESTPGPLIMVVAFVGFLGAFNQALLGSEHLFLAGAIGATIVTWFTFLFSFIFILAGAPIIESTHNELKFTAPLTAITAAVVGVILNLALFFSYHVLWPNGFSHPFNYEAALIAIAAFIALFHFEVKVMYVIFASALCGLILHTVI
>NZ_CP032002.1|WP_005243591.1|950497_951418_-|chromate-resistance-protein
MKISLLISSLPTQNTTTRMRVWRSLKASGAAILRDGVYLLPISHSEKFDPIANDVISEQGTAYVFHAEQPLNLELVHFFSRKEEYDALYKQLTELRERQTKDKKKELLKQVRKLRKSIDALVEIDYYPDETQAQVLNELSSLELSIARLGEANEPQAIQAHIQLLNKSNYQNKIWATRKRPWIDRLASAWLIKTFIDTSPTFIWLETPSDCPKDALGFDFDDATFSHINHWVTFEVLLHSFNLETPALKKIAEIVHYLDIGGIEPPEAIGIEKIIQGIRSQISNDNQLFELSNHIFDGLYANLSRE
>NZ_CP032002.1|WP_005243577.1|951634_951922_-|DUF2591-family-protein
MIQISQLTTEQLPKALMLAMRHKTTPTIDWELCGNILEHEKISLVFFGTHWVAMEINPFGNHPKATQKSVSALDAVIKCYIQIKLGDAINLNLNE
>NZ_CP032002.1|WP_005243575.1|951933_952137_-|exodeoxyribonuclease-VII
MSKSKNELSFKDGYELLKKNAALLESQEEPDIDNLMKIVEESMIAYKACKSRVDAVQQALNETFKEN

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Crispr_ID: NZ_CP032002_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032002_4

2000848-2001056

Orphan

I-F

Consensus_repeat	Method
CGTTCACTGCCGCATAGGCAGCTTAGAAA	CRT
CGTTCACTGCCGCATAGGCAGCTTAGAAA	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP032002_4

>merge|NZ_CP032002|4|2000848-2001056|CRT,PILER-CR
AGTTCACTGCCGCATAGGCAGCTTAGAAATTCATTTTATTTAAACTTTCTAATGTGTAGCCGTTCACTGCCGCATAGGCAGCTTAGAAAAACAGCAATAGTTGGCTTACCGATACTATCTCGTTCACTGCCGCATAGGCAGCTTAGAAAGCGATGAAGAAAACCCAAATGGCCTATCAAACGTTCACTGCCGCATAGGCAGCTTTTCAA

>NZ_CP032002|4|2|2000848-2001056|CRT
AGTTCACTGCCGCATAGGCAGCTTAGAAA	TTCATTTTATTTAAACTTTCTAATGTGTAGC
CGTTCACTGCCGCATAGGCAGCTTAGAAA	AACAGCAATAGTTGGCTTACCGATACTATCT
CGTTCACTGCCGCATAGGCAGCTTAGAAA	GCGATGAAGAAAACCCAAATGGCCTATCAAA
CGTTCACTGCCGCATAGGCAGCTTTTCAA

>NZ_CP032002|4|2|2000849-2000996|PILER-CR
GTTCACTGCCGCATAGGCAGCTTAGAAAT	TCATTTTATTTAAACTTTCTAATGTGTAGCC
GTTCACTGCCGCATAGGCAGCTTAGAAAA	ACAGCAATAGTTGGCTTACCGATACTATCTC
GTTCACTGCCGCATAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032002.1\|WP_118902485.1\|2011329_2011548_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_005081125.1\|1998473_1999772_-\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_CP032002.1\|WP_118902473.1\|2003470_2004490_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP032002.1\|WP_004638625.1\|2009861_2010950_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP032002.1\|WP_118902457.1\|1986597_1991106_-\|translocation/assembly-module-TamB-domain-containing-protein	unknown	unknown	gnl\|CDD\|225463
NZ_CP032002.1\|WP_118902461.1\|1997597_1998032_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl\|CDD\|376515
NZ_CP032002.1\|WP_118902489.1\|2011571_2012737_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP032002.1\|WP_004282326.1\|1996448_1997330_-\|IS982-like-element-ISAba9-family-transposase	unknown	unknown	gnl\|CDD\|372648
NZ_CP032002.1\|WP_004638629.1\|2006423_2007194_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|187629
NZ_CP032002.1\|WP_118902464.1\|1999817_2000603_-\|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl\|CDD\|238386
NZ_CP032002.1\|WP_075315736.1\|1995347_1995983_+\|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase	unknown	unknown	gnl\|CDD\|153101
NZ_CP032002.1\|WP_005081122.1\|1994021_1995344_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|235865
NZ_CP032002.1\|WP_005081120.1\|1991152_1993858_-\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|223801
NZ_CP032002.1\|WP_118902476.1\|2004560_2005244_-\|superoxide-dismutase	unknown	unknown	gnl\|CDD\|223678
NZ_CP032002.1\|WP_118902479.1\|2007336_2008395_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP032002.1\|WP_005064486.1\|2005391_2006324_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP032002.1\|WP_118902482.1\|2009043_2009862_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP032002.1\|WP_118902470.1\|2002173_2003193_-\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_CP032002.1\|WP_160124280.1\|1997384_1997558_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_075315739.1\|1997988_1998369_-\|dihydroneopterin-aldolase	unknown	unknown	gnl\|CDD\|376737

Protein	Function_ID	Function_description	E-value
NZ_CP032002.1\|WP_005081125.1\|1998473_1999772_-\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	8.80366e-91
NZ_CP032002.1\|WP_118902473.1\|2003470_2004490_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.76691e-15
NZ_CP032002.1\|WP_118902457.1\|1986597_1991106_-\|translocation/assembly-module-TamB-domain-containing-protein	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	3.37857e-115
NZ_CP032002.1\|WP_118902461.1\|1997597_1998032_-\|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl\|CDD\|376515	pfam01288, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK).	1.46654e-11
NZ_CP032002.1\|WP_118902489.1\|2011571_2012737_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.18484e-72
NZ_CP032002.1\|WP_004282326.1\|1996448_1997330_-\|IS982-like-element-ISAba9-family-transposase	gnl\|CDD\|372648	pfam13612, DDE_Tnp_1_3, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.26214e-23
NZ_CP032002.1\|WP_004638629.1\|2006423_2007194_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|187629	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs. HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	8.24748e-126
NZ_CP032002.1\|WP_118902464.1\|1999817_2000603_-\|HesA/MoeB/ThiF-family-protein	gnl\|CDD\|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	5.35914e-97
NZ_CP032002.1\|WP_075315736.1\|1995347_1995983_+\|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase	gnl\|CDD\|153101	cd01042, DMQH, Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain. Demethoxyubiquinone hydroxylases (DMQH) are members of the ferritin-like, diiron-carboxylate family which are present in eukaryotes (the CLK-1/CAT5 family) and prokaryotes (the Coq7 family). DMQH participates in one of the last steps of ubiquinone biosysnthesis and is responsible for DMQ hydroxylation, resulting in the formation of hydroxyubiquinone, a precursor of ubiquinone. CLK-1 is a mitochondrial inner membrane protein and Coq7 is a proposed interfacial integral membrane protein. Mutations in the Caenorhabditis elegans gene clk-1 affect biological timing and extend longevity. The conserved residues of a diiron center are present in this domain.	1.45336e-74
NZ_CP032002.1\|WP_005081122.1\|1994021_1995344_+\|MFS-transporter	gnl\|CDD\|235865	PRK06814, PRK06814, acyl-[ACP]--phospholipid O-acyltransferase.	6.35634e-138
NZ_CP032002.1\|WP_005081120.1\|1991152_1993858_-\|outer-membrane-protein-assembly-factor	gnl\|CDD\|223801	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane].	1.99622e-63
NZ_CP032002.1\|WP_118902476.1\|2004560_2005244_-\|superoxide-dismutase	gnl\|CDD\|223678	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism].	1.30872e-104
NZ_CP032002.1\|WP_118902479.1\|2007336_2008395_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	1.52553e-28
NZ_CP032002.1\|WP_005064486.1\|2005391_2006324_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	2.09607e-49
NZ_CP032002.1\|WP_118902482.1\|2009043_2009862_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	1.43562e-120
NZ_CP032002.1\|WP_118902470.1\|2002173_2003193_-\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	2.84664e-43
NZ_CP032002.1\|WP_004638625.1\|2009861_2010950_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP032002.1\|WP_075315739.1\|1997988_1998369_-\|dihydroneopterin-aldolase	gnl\|CDD\|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	5.91048e-34

>NZ_CP032002.1|WP_118902464.1|1999817_2000603_-|HesA/MoeB/ThiF-family-protein
MSDHLEHTFELTDDEMHLYSRQILLDGWDIEAQEKLKLANVLIVGAGGIGCTSAELLARAGVGKITIVDADTIEMSNLQRQIAFTSNDLGQYKAETLAKHLQEINPHIQVSYQNTRFDETNADELVQHQDVVLDGCDNFTTRYLVNVVCKTHQVPLISASAIGFEGQMFMVESDSACYECLFPKENQTNEGLRCAESGVLATTPVMIASLQAHHTLLFLGLGLTSLKQKLLLWNGLNLTQRILQFEKDVNCPVCQASASVN
>NZ_CP032002.1|WP_005081125.1|1998473_1999772_-|AarF/ABC1/UbiB-kinase-family-protein
MKRNILVDGLRSVARIGETVIVAAQAGVKYATEKPSNAKLMRETFESLGSTYIKLGQFIASTPSLFPREYVQEFQGCLDQTPTLPFSYIQQVLAEEFEGKDLNSIFSFIDENPLASASIAQVHAAKLVTGEDVVLKVQKPGVETILYTDLNVVHWATKLLEKAVPKIKFASLSEIVDEIKTRMVREVDFIEEAQNLDDFVQYLNISGNQAATAPKVYHQFSTRRVLTMQRLYGVPLTDFDVVKQYAKDPTQVLITAMNTWFGSLMLCKSFHADLHAGNLMLLEDGRVGFIDFGIVGQLNPEVWTACMAFMDALQHTNYIAMAENMLKMGMTNQKIDTQVLAADLERLFSGVLLADPQEILSSNPADLNDIMMDMVAVGERHGIKFPRDFALLFKQMLYFDRFMRVLAPYTDIYADQRLKMVHNIEPASLLKH
>NZ_CP032002.1|WP_075315739.1|1997988_1998369_-|dihydroneopterin-aldolase
MDAIIIEGLKVDTVVGCFNWERQIIQPLMLDLTIHNDLSQAARSDELDDTLNYAQICEIAAQVIQDAKPKLIEHAAQLVLETLFSTFPSIESICITIRKPAIIAQANAVGIRLDRNRNDFCARAGE
>NZ_CP032002.1|WP_118902461.1|1997597_1998032_-|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MIATETIFALALASNVQQLENFNFAYAQIMSLGAVEFSSIYEIPCRDGVGADYWNSACLLKSHLSVDEIVDILKKLEQQSGRVRPSHHISLDIDVIAWGESLDQMQFNPKKLPLALDVKIPLYELWSNQILQYDQNRKYPIITL
>NZ_CP032002.1|WP_160124280.1|1997384_1997558_-|hypothetical-protein
MKTLVSISIMAVLLSGCAAMSVEQCKTANWSSVGEKDGSAGYESRLDKYPNLNFLSD
>NZ_CP032002.1|WP_004282326.1|1996448_1997330_-|IS982-like-element-ISAba9-family-transposase
MSIEEFIIFVYVIIEELYPIVVTQPLRTRGFPPAVTDAEIITMQIVGEFLGLDTDKNIWMYFKNNWLEWFPKLGSYPNFCKHCANLWHVSQSIMAQLIQRYGSDNIHFIDGFPLPVCSYTRARKHKNFKEYAGFSYCAAKQEKYYGFKAHIVINLSGMISGYTFAPAHCDERDVAPEITNDIYGLLGADKGYLRPELKRYYEYQGIDLQTPFRKNMIDFRPKETLQILMKARRKIETVIGQLTDRFHIQKVRAKDLWHLTHRITRKILSHTICVVLNKKLGHSPIQFENLILS
>NZ_CP032002.1|WP_075315736.1|1995347_1995983_+|2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone-monooxygenase
MRHYTGLDQLINSFDQALRSLVPGATTSQRSNPANDEASQLCVSDARHVAGLMRVNHSGEVCAQALYHGQALTAKLPHVREEMQQAAIEEQDHLAWCEDRLKELDSHTSVLNPIWYGLSYGMGAIAGIAGDKYSLGFVAETERQVSQHLQEHLQQLPEQDQRSRKILEQMNEDELHHRDTALKAGGVDLPVPVRITMTAISKLMTKTSYYI
>NZ_CP032002.1|WP_005081122.1|1994021_1995344_+|MFS-transporter
MMKQDEQLMTSRRFAPMFFTQFFGALNDNVYKQALLLVITYGWIQQQSAAVSTLNNLAALLFILPYFFFSATAGQVADKYERSQLVRFLKLLEIVIMMIGTAGFLLGNLWLLLFALFLMGTHSTCFGPIKYAILPEILKPQELMSGNALFQSGTSIAILFGMILGGAVIASSAGNLLWISITVLIIACLGYLASRFILPQKVAAPDLKIDWNFFRTSFQTIKYAKSIPIVFTVLLGNSWYWFYGATYLTQIPQLTQQNLHASENVVSLLLTFFSVGIGIGSLLCRRIGGSEINIKMVPYGAIGLTVFAFYLAASLTFVPERTGELLSLGDVFSEGAVYYHVMLAVTLLGISGGFYIVPLYAMMQAYSPRSHRARVVAANNILNAVFMVSSAIFSILILSILKIDIKILFSITAVLSAIFSFWLLTRLKPLLKNAPTTLED
>NZ_CP032002.1|WP_005081120.1|1991152_1993858_-|outer-membrane-protein-assembly-factor
MPSKSKFKQSTLVHSMHLIFKMQSFPKLICSGFLISYCISVAYADEEAVVVAENSTIERMKDQVKSIPSPEIPYETFNLSSEYYNPAQDSVAALKQQEEAPSQIDTLKPIQLDENLEHLPVIAVDQNMANEIFQIAEEAKNDALAYRENVAKNPELVVNEATQSELTEISNPPVNIDRLMQEIQADSQIIVEANESGRTLADLQSKTEQVEEKAGFFKRIVNRFRPENLLGAERVPRISADVSGAPPALATNIKAKLSSFTQEAFEDFNVALPQLRSLTNQAAQAVGYYDARFSFEKLSDSRVKVTVEPNEPVKIDKQNIEFTGEGENAPQFQVIRLIPEQDEGDIFNHGKYEATKTKITNAASDNGYFDAYWRLHDVKISQPEKTAEINLKYDTGERYKLKAVEYKMSDPSKPLPLTQKVLDSLAPWKDGDDYAFWRVNVLANNLTNTRYFNYTLVDTIKPDAIQPPLDLPPDLQALVDQQRVEQSQLFSAQQKADIARQQVVSAEEVTQDVVDESQFSGSEPTPAYSLARSMPNIQNDETERQALEEQARLEKKIPVVVTLNADRLNTIETGVGYGTDTGARIRSQYRRAFVNKHGHSFDANIEVSEIRQSIDGRYSIPYKHPLNDYFNLVGGYERETRDNIGPNVELLVESAVVGGERVIKNPLGDWQHTFGLRYRLDRLTGKGDVDVSELPDAFRAAGTNSEQESLLLGYEISKTNSNTRLNPTKGFKQTYKVELGTESILSDANMAILTAGWRFIYSLGENDNHQFVGRGDASYIFTDDFDKVPYNLRFFTGGDQSLRGFDYKSLSPEEDGYKIGGQALGVGSLEYNYQFKDGWRAAVFSDFGNAFDKQFSNPTEYSVGVGIRWRSPIGPIRLDVASGISNDNRPIRLHFFIGPQL
>NZ_CP032002.1|WP_118902457.1|1986597_1991106_-|translocation/assembly-module-TamB-domain-containing-protein
MTEEVEQQQTPSTGPKRERRILRSILLMVLIILLLLVSSLLVMMSTDKGSRFLLDRVLQTQKIIHYEYESGNLLRGIILKNVLVQLEAVDVSLDRADVSLGWRAILKKEIHLSHADVANLKIINKKPPSGEPFGFDPIKLPFILRIDEASLDHLEIQTATAKINFDDIYLKDALWSETKLKFKDSRMDMGYLAVKDATGQIDFSGKYPLNAKADLIIPALNSIDIETIKVVATGSLDTLRAGVATLTPDLLTGWAVLHPVRDQVPMQGELFFRNYHLPILKEQKLFAKDGIARFKGNIEKLVLSLDTDLKGEQIPEGKYNALMETDLTDQLNIQDFNGQLMGGSVSLKGLVNWKDHVSWDLKGRLDRLNAKDETLPQIAQDFLPPSLDANISSTGMLKNGMSVNAQLAFDKYETWQVKLNQSEQKNNQPEPMLLDVAWQGIDRAVPYIGWLSSAEGHTNITLKDDQQDIYVATTVRPHEQGLLPAGKYDAHIDLKGSLLNVENFSYVAEKGRLDGQAKVKLPTDKQQLAWQAQLKAKDFNPQTVALAAPVNLLNGEILASGFAKPNQQIIQFERIDLQGQLAQANQKETVVLQGKATTALMFDDVQAGGGFKSFAVDYDGSLNALNQGNGLLKINIAGTPTNIKINELKHDGVAGKLFATGTVDLQDKIGWNIETSLVRFKPQYFVSSLKGEVSGHVKTQGVWSDKVKRIDIRQLNAAGFLNNRPVRGRGNLSLLLDSNQTGFLPQQFEANDLFFAYGQNQLQATGNAQSLRFKVNAPALYELYPGLRGRAYGSLNVQSQPRLSATANLVVDGFAFNDLASVKSLRIQGQLPTSETTPTKLTATIDQLRSGKRELENATLNLTGTRRAHLLKLETKNARTNFYVQLAGGFNQNNDWLGQIQKGKFSSRRVSLVQNQNTPVIYTTARTELYVGQHCWQSAESQLCLDQPARISPEKGNFSFVTKDLDLKDFAAFMPEGIAVTGQLNGYAKASWAKGTRPKLDSRLVTRKGEIGLAAEDPQDPATTVTYDELSLIAKSISDGLLFRVDMKTPDIGTGYANVVIDPFQTGMPMRGEIAFDDVQLKVFKPFIKDVRSMAGTLALAGKINGTLTQPQFTGEMRLKNGAISMISLPVNLTNMQLYSSIRQDTASIDGAFNSGQGVGRIKGRFDWKDNPHLSLTLKGDNLLVRQAPMITAIVQPDLSLDVYPFDQRLSLRGTIDVPRARISMPESSATVVNVSPDVRVVHQGQDLLATLRAAKPWDIRADMTVTLGNQVIFQGFESNIPLVGRLHLSQRGLETAMRANGAIGVSQKVKIEAYGQSLDLNRAIARFNGPLANPTLDIDANKSVQGSMVGVRVAGTATVPNVQIYNDAGLSEQEALNALLTGRINEGGSGLSNTGGFKSDVNNTIAAAGISMGLGGTRALTNQIGRTFGLSGLALDAQGTGDDTQVSLTGYITPDLFIRYGVGVFTPVNKLTLRYQMNRRLYLEASQSLERAIDVFYNWRF
>NZ_CP032002.1|WP_118902470.1|2002173_2003193_-|triacylglycerol-lipase
MKKKYLNAIVLTTGMLISGGSVVHAGLFSFLSPKASWQNCDVKSCSVGGSTNVTSSYAKTKYPIVLAHGMSGFSAVGPLQYWHGITEDLVSNGANVFVTQQAAFNSSEVRGEQLLLQTKQILAISGAEKVNLVGHSHGTHSIRYVAGLMPDKVASVTAVAGPGKGSNVADVVYQFTQSPVGPIAAPVISAGVNAFGALIGIGSGNYYDQDSLAGLWSLTTAGAAEFNQRFPAGIPMTACGSGRELESNGVRYYSWTGISPFTNALDPFDYALTATSLLIPGDSDGLVPRCSSHLGTVIRDNYAFNHLDEVNQVLGLVGFLQNPVTPFRLQANRLKNLNL
>NZ_CP032002.1|WP_118902473.1|2003470_2004490_+|AraC-family-transcriptional-regulator
MSIPRLHHPHFISSSYVHLLSEVVARWNISAEELFWGTGVEIEKLHDINYKISLTSFKKVIARTIDLTQEQGIGFYASTQLKISSHGLLGFTVAIAKNPLDAILTINQFVSLQCSFVDLHFVVENELAYYNIIYDKSVMDFNDPCDLQAYEFSCVFFLTGFVHLVRFFIPDFKPSIDLQCKCPEYFSRFKHILASSFAEIHYEQPHTRLISSAKFLETPLSMSDPLTSEKFKLLCQKELDELVATQDILHRVKNMIDDQHQGLLNIDQVAQKLNLTKRTLQRMLQEQNVSFQVLYDQVRKAKAQKLLLNPFITKDEIARNLGYSSRSSFNRAYKRWENQ
>NZ_CP032002.1|WP_118902476.1|2004560_2005244_-|superoxide-dismutase
MRYLNKGLLTLLVCSSVSISAFANFTQAPLPYKSDALEPAIDQQTMEIHYGKHHKAYVDNLNAQIKTYPELDKLNIEQIQQQISKYNAAVRNNGGGHFNHAFFWESLAPADKTGKVSPKLLKQINQDFGSFKAFQEQFNQAATSRFGSGWAWLIVNPQGKLEITSTPNQDNPLMDIAEKKGQPLLGLDVWEHAYYLKYQNRRADYTNAFWSVVNWNKVNDRYQKAIK
>NZ_CP032002.1|WP_005064486.1|2005391_2006324_+|IS5-family-transposase
MKKPTHKIYRTTNWPAYNRALINRGNIALWFDPATQWYAPSKGKQGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWTAPDYSTLCRRQKHIDIAISYQKSSDGLHLLVDSTGMKFLGEGEWKRKKHGAEYRRQWRKLHIGIDAKTLQIRAIQLTTNNVCDSQVLGDLLNQIPQDEQIDSVYTDGAYDTKQCRQVIADRQAHAVIPPRKNAKPWKDTKSSSLERNELLRTIKRLGRTLWKKWSGYHRRSLVETKMHCIKLLGDKLSARSFDSQVNEVHARVAVLNRFTELGRPLTQVTP
>NZ_CP032002.1|WP_004638629.1|2006423_2007194_-|3-hydroxyacyl-CoA-dehydrogenase
MKIQGKHFVITGGGSGLGAATAEYLVEKGASVTLVDMNAEVGEQQAKAIGDQAEFVKLDVTDEQAAEQFFKEVVEKHGSLHGLINCAGVGPSAKVVGKDGVHDLAMFSKVLHINVTGTFNMLRYAADAMSKNSVEEGDEDRGVIVNTASVAAFDGQIGQAAYSASKGAVVAMTLPIARELARHSIRIMTIAPGIMETPMLKGLPQNVQDALGQMVPYPSRLGRPEEFARLVAHIAENAYLNGEVIRLDGAIRMAAK
>NZ_CP032002.1|WP_118902479.1|2007336_2008395_+|AraC-family-transcriptional-regulator
MSKNPPLDLNSAKDTISNALIREALSVAASRGLNIVNIANRASISAELLTSAKARIPVTQCAQLWVELAESMNDEFLGMDSHPMRRGSYKLLAKLAFEADTLEQAIREILKFLSLVLDDIHGELVQNGSKAYLILHDREQPKRMFTYSTFLMLVHSLMCWLSDQRIALQKMSFKCHQPVEIQDYRIRFCENIQFHATQNCIEFDAHYLKHKIKKDKQALNDFLRHTPYNLIVRFKNENSLSLQIRRQLLLQPPSEWAELKDIAQQLNMSTATIQRRLKHEGVSYQQLKNDIRCDIAIERLSKTNDSIQSISDDLNFHDPSAFHRAFKKWSGVSPGSYRKSAPNKQNRLHHLG
>NZ_CP032002.1|WP_118902482.1|2009043_2009862_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MNIAQALEIKGEIDSYERQEAAWLLEHILGVNSLELKLRLEQELTEIQEQAYLDGLARIEQGEPLAYVTGSQPFWTLDLKVTHDTLVPRPDTEILVETVLKLSLDPQANIVDLGTGTGAIALALASERPQWSVTATDIYQPTLEVAQENALKHGLSQVKFACGAWFEALEQQQFDLIVSNPPYIDPDDVHMQKLKSEPERALIAANHGLADIEIIIAQGKAWLKAKGWIALEHGYDQGRAVREIFELHGFEQIQTIKDYGSNDRVSLAQKAG
>NZ_CP032002.1|WP_004638625.1|2009861_2010950_-|peptide-chain-release-factor-1
MKASLRLRLDQLCDRHEELTALLADVEVISDNKRFRKLSREHNDLTEITEVWGKYRQAEEDIETAEMMKSDPDFKDMAEEEIKENKARLVELEDQLNVLMIPKDPNDANAAYLEIRAGTGGDEAAIFSGDLFRMYSKYAETQGWRIEVLSENEGEHGGYKEVICRIDGEGVYGRLKFESGAHRVQRVPATESQGRVHTSACTVAILPEVDVDTTVEINPADLRIDTYRASGAGGQHINKTDSAVRITHIPSGVVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGSGDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAMLAQENGG
>NZ_CP032002.1|WP_118902485.1|2011329_2011548_+|hypothetical-protein
MKANILLLGAILASSTIATTTYADNATRVAATSALGSVVGTAIGKEIGGHNGALIGSDPSQNNGQCIPLKLT
>NZ_CP032002.1|WP_118902489.1|2011571_2012737_+|IS3-family-transposase
MAKRFSTEFKQQSIEYALANTHEPLAAIARKLGVGYSTLDKWVRETNLAGTSKRQLTAEQQRILDLEKEVKQLREANDILKKGACVLSDSRSNQEKYTVIADLTMKKAITISSACKYLAVSPSGYYAWRKRRVDTAQKYKDLKAVYWHHHARLGAPSLVHDMHDLGYNLSERTVGRMLKHLGLRSKISRKYKHTTDSNHRLPTAPNLLDRQFTVTKPNRVWTTDITYIRTKEGWLYLCVMLDLFSRRIVGWQTSYRIDRQLVCDAFNYAMARQGYPKGVMVHSDQGSQYCSRDFRAILLTNGCIQSMSRKGNCWDNAVTESFFHTLKGHVVHGSVFTTRKEANAVLFEYIEIYYNRMRRHSANGWLSPEAFEQKYFRALEGSTVHNSV

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Crispr_ID: NZ_CP032002_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP032002_5

2800901-2800994

Orphan

Consensus_repeat	Method
GCATCTGCACGGATTTGAGCTTCATTAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP032002_5

>merge|NZ_CP032002|5|2800901-2800994|CRISPRCasFinder
GCATCTGCACGGATTTGAGCTTCATTATTAATAGCTGCTGTTCGTGCTGCTGTTTCCGCGGCATCTGCATCTGCACGGATTTGCGCTTCATTAT

>NZ_CP032002|5|2|2800901-2800994|CRISPRCasFinder
GCATCTGCACGGATTTGAGCTTCATTAT	TAATAGCTGCTGTTCGTGCTGCTGTTTCCGCGGCATCT
GCATCTGCACGGATTTGCGCTTCATTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP032002.1\|WP_160124045.1\|2802194_2802323_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_001223318.1\|2803980_2804682_+\|IS1-like-element-ISPa14-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP032002.1\|WP_008942206.1\|2806726_2808238_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_017396682.1\|2797561_2798434_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_020846310.1\|2804782_2805715_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP032002.1\|WP_008942211.1\|2794800_2795619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_008942209.1\|2798722_2800327_-\|YadA-like-family-protein	unknown	unknown	gnl\|CDD\|240612
NZ_CP032002.1\|WP_005089444.1\|2812142_2813075_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP032002.1\|WP_004637906.1\|2795692_2797285_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP032002.1\|WP_008942207.1\|2806171_2806567_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|131478
NZ_CP032002.1\|WP_005092262.1\|2788739_2789933_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP032002.1\|WP_005092264.1\|2787885_2788677_-\|tRNA-threonylcarbamoyladenosine-dehydratase	unknown	unknown	gnl\|CDD\|224100
NZ_CP032002.1\|WP_008942213.1\|2792920_2793736_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|238635
NZ_CP032002.1\|WP_008942212.1\|2793797_2794694_-\|DUF3298-domain-containing-protein	unknown	unknown	gnl\|CDD\|378702
NZ_CP032002.1\|WP_008942204.1\|2809469_2810615_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|130895
NZ_CP032002.1\|WP_004637913.1\|2787407_2787863_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|377495
NZ_CP032002.1\|WP_008942205.1\|2808532_2809240_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_004637901.1\|2802683_2803508_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP032002.1\|WP_005092261.1\|2790038_2792795_-\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP032002.1\|WP_008942208.1\|2802328_2802679_+\|transposase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP032002.1\|WP_008942209.1\|2798722_2800327_-\|YadA-like-family-protein	gnl\|CDD\|240612	cd12820, LbR_YadA-like, YadA-like, left-handed beta-roll. This group contains the collagen-binding domain virulence factor YadA an adhesion proteins of several Yersinia species, and related cell surface proteins, including Moraxella catarrhalis UspA-like proteins. The collagen-binding portion is found in the hydrophobic N-terminal region. YadA forms a matrix on the bacterial outer membrane, which mediates binding to collagen and epithelial cells. YadA inhibits the complement-activating pathway with the coating of the cell surface with factor H, which impedes C3b molecules. These domains form a left handed beta roll made up of a series of short repeated elements. UspA1 and UspA2 are part of a class of pathogenicity factors that act as cell surface adhesion molecules, in which N-terminal head and neck domains extend from the bacterial outer membrane. The UspA1 head domain of Moraxella catarrhalis, is formed from trimeric left-handed parallel beta-helices of 14-16 amino acid repeats. The UspA1 head domain connects to a neck region of large extended, charged loops that maybe be ligand binding, which is in turn connected to an extended coiled coil domain that tethers the head and neck region to the cell surface via a transmembrane region.	2.6198e-21
NZ_CP032002.1\|WP_020846310.1\|2804782_2805715_+\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	1.3328e-48
NZ_CP032002.1\|WP_008942207.1\|2806171_2806567_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|131478	TIGR02425, putative_gamma-carboxymuconolactone_decarboxylase, 4-carboxymuconolactone decarboxylase. Members of this family are 4-carboxymuconolactone decarboxylase, which catalyzes the third step in the catabolism of protocatechuate (and therefore the fourth step in the catabolism of para-hydroxybenzoate, of 3-hydroxybenzoate, of vanillate, etc.). Most members of this family are encoded within protocatechuate catabolism operons. This protein is sometimes found as a fusion protein with other enzymes of the pathway, as in Rhodococcus opacus, Streptomyces avermitilis, and Caulobacter crescentus. [Energy metabolism, Other].	3.58255e-40
NZ_CP032002.1\|WP_001223318.1\|2803980_2804682_+\|IS1-like-element-ISPa14-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	5.8597e-26
NZ_CP032002.1\|WP_004637906.1\|2795692_2797285_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP032002.1\|WP_005089444.1\|2812142_2813075_-\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	6.671e-50
NZ_CP032002.1\|WP_005092262.1\|2788739_2789933_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.85109e-09
NZ_CP032002.1\|WP_005092264.1\|2787885_2788677_-\|tRNA-threonylcarbamoyladenosine-dehydratase	gnl\|CDD\|224100	COG1179, COG1179, Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism].	4.18578e-105
NZ_CP032002.1\|WP_008942213.1\|2792920_2793736_-\|TatD-family-hydrolase	gnl\|CDD\|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	7.8258e-82
NZ_CP032002.1\|WP_008942212.1\|2793797_2794694_-\|DUF3298-domain-containing-protein	gnl\|CDD\|378702	pfam11738, DUF3298, Protein of unknown function (DUF3298). This family of bacterial protein C-terminal regions is highly conserved but the function is not known. Several members are annotated as being endo-1,4-beta-xylanase-like, but this could not be confirmed, and the structure can be defined as a heat-shock cognate 70kd protein 44kd ATPase.	1.20469e-10
NZ_CP032002.1\|WP_008942204.1\|2809469_2810615_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|130895	TIGR01836, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.16237e-60
NZ_CP032002.1\|WP_004637913.1\|2787407_2787863_+\|CHAP-domain-containing-protein	gnl\|CDD\|377495	pfam05257, CHAP, CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.	0.00333293
NZ_CP032002.1\|WP_005092261.1\|2790038_2792795_-\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0

>NZ_CP032002.1|WP_008942209.1|2798722_2800327_-|YadA-like-family-protein
MKKTFQLSIITVALLASHTYAAPVWEGPAGTGTGFSNAMGGETNFANVDPSATGIILGQAIDVSQTSIGIGYNSNAMGNDSFSAGSANNANGDSSVAVGRIANANGDNSIALGATVAAGGTDSIAVGNSQTVNGDNATAVGRGSLVNGSQASSLGHVAWTGGDGATAIGSETWANAENATVLGFNAETGGKNALNIGHDAHGGGLNAIHIGHKTTGSAENTIVIGSNDPTKPGQPWADDKNSVAIGYNADTHNGGGGSTENTVSFGGFFTGAVRTISQVADGINDHDAINVSQLNNAIASLTSGAELIAHADDHLAVEKNQRIAADTDLQAALDNEAQIRADADAAQTAARIAAVDNEAQIRAAADAAEKAARIAGDEALAEARIAGDAAEAAARTAAINTEAQARIAGDAEQRAERIKQVNRLDGRINAEAAERTAEVARLDGRIDHASRRLDDIEKTAYRGVAIALAAQQAVPNIRSGQVALFAGVGHFEGETAGSVGVVTSFISNRVSLSGAVGFAGGNEVGGRVGLSYSF
>NZ_CP032002.1|WP_017396682.1|2797561_2798434_-|hypothetical-protein
MKSTQYKLSLVLLGAFFFTGCKDENGNFNVGVSLGGTGTGGLSVGTESPVPKPQPDVKPDRMEEDGLLYAVAYPNPITQNCNGIERKIQFVRHYFPHTPMIMGDRVDLYGMKDSSPTRFKLQVIVKNTTSSPIYEYINSCKAAFQLTGTKTAKITQTDYCLNDETVNVYQPDESRTYFYTFNLPNILQNWTANYQAQYSKKFYAETQGSMYDNESIKERTQCDPLSTILLLDEYPSTKDGAPPSSNTGNGNNSGSNNNPPTNTDNPPPIFGGFDLDEDDAEPPIFAGFGL
>NZ_CP032002.1|WP_004637906.1|2795692_2797285_-|peptide-chain-release-factor-3
MSFKDELAAQVAQRRTFAIISHPDAGKTTMTEKLLLWGKAIQVAGMVKSRKSDRAATSDWMEMEKERGISITTSVMQFPYKKHTINLLDTPGHEDFSEDTYRTLTAVDSALMVIDGAKGVEERTIKLMEVCRMRDTPIISFVNKMDREIREPLELLDEIENVLNIRCVPITWPLGMGRDFAGVYNLIDNKFYVYKAGFGSTITDIEVRDGYDHADIREKVGELAWASFEESLELVQMANEPLDRELFLQGKQTPVLFGTALGNFAVDHVLDAFINWAPEPKAHPTQERTVDANEEGFSGFVFKIQANMDPKHRDRIAFMRICSGKYEKGLKMNHVRLGKDVRISDALTFLAGEREHLEEAWPGDIIGLHNHGTIQIGDTFTSGEKLHFTGIPHFAPEMFRRVRLKDPLKSKQLQKGLKELSEEGATQVFMPQINNDLIVGAVGVLQFDVVAYRLKEEYKVDCIYEPVNVHTVRWIHCDDEKILNEFKKKAHDQLSVDGGGHLTYLAPSRVNLQLMQERWPDIEFRNTREH
>NZ_CP032002.1|WP_008942211.1|2794800_2795619_-|hypothetical-protein
MNILKPLATISLMMGIMALTACDRPDKSEADSTIQQTSKIEKAEVLPYLNIQEAKAKYALPFCEKKNCIDIAIQTVNTQDHWLNSWIEQQQSNVIQHQIELKQNMSLQQAINAYVKKSDEWQDKYSQNKAYELQMSTRIASQRNQYVLLQIGVDSKQEDVSIKDRYYFFVADRKLLKSLTVLDVIQKNQQTAMHNLIQAHYQTWREQQSAEVNKQLPKTLYWGQADWFFDGEGIGIHYRANEISKDAPQLDIYFTTEQTKQMLQPEIYQKMF
>NZ_CP032002.1|WP_008942212.1|2793797_2794694_-|DUF3298-domain-containing-protein
MKTFYKYSVLACAILLAACQPKSEPKESQEQTKDPVVEQQTETTLRGETVKVELTLPECKGNACPEFVVERLQSNFPFIDQFLDQQILDQLSKMLDVVDTDTAVSTVQAAEQEQKIGPQVQQYANAFIKVDEELKALSVSHQISLMVKPKILQTEGSLATIVLNSSSYMGGAHGSTAQQYFNFDLVQQKQVQLKDLLLPKQQAVLKKLTHDAFKTWIVDTKLANNPEEYEQAWPFQMTENFLFGEQGLILQYGEYEIGPYAVGLPRLVIPYDQLQGVIKPEYLPKVDAPAASTPVTSS
>NZ_CP032002.1|WP_008942213.1|2792920_2793736_-|TatD-family-hydrolase
MQLFDTHTHFDVADFDQDRQQLAVQAKQVGVEALILIGFIESRFGTLIQTHQQLQGWDNVPKSYLAPGLHPFYIQQHHEAHLQQLERILQQHDCVAVGEIGLDTFLKQHKQPELFAKQQYYFNAQLELANQYNKPVLLHIRKAHAESIAILKAQKFKLGGIAHAFSGGIEEAKALVKLGFKIGITGQITNPNAKKLHQVVQAIGIEHLVIETDCPDMTPLCCQTSTEHRTRNTPVNLPYVLEYLAAMLEQSQEVLAQQIWQNSLSTLNIKF
>NZ_CP032002.1|WP_005092261.1|2790038_2792795_-|aconitate-hydratase-AcnA
MARYSKINSFNALQTLTVGSKSYQIYSLARAAEQLGNIDKLPKSLKVLLENLLRFEDQKSVKVEDIQALVDWQKDKRSDQEIQYRPARVLMQDFTGVPAVVDLAAMRAAMAKAGGDPNRINPLSPVDLVIDHSVMVDHFANQNAFDVNVRIEMERNGERYQFLRWGQSAFDNFSVVPPGTGICHQVNLEYLAQAVWLGEDEGQTFAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGFKLTGRLNEGITATDLVLTITQMLRQKGVVGKFVEFYGDGLADLPLADRATIANMAPEYGATCGFFPIDEVTLSYLALTGRQQQRIDLVEAYSKAQGLWRNTGDEPVFTDTLSLDMSTVQASLAGPKRPQDRVLLADVAKTFNTLMELTLKPVDEMKEQLENEGGGGTAVAAKQANLPHESPACTIDGQIYPLNHGDVVISAITSCTNTSNPSVMLAAGLLAKKAIEKGLQRKPWVKSSLAPGSKVVTDYLAAAGLTPYLDQLGYNLVGYGCTTCIGNSGPLPDPVEEAIQCHDLNVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYGLAGNIRTDLTSQPIGQGKDGQDIYLKDIWPTQAEIDQMLQKVNTEMFHKEYAAVFDGDETWQAIQIPQSQTYTWQDDSTYIRHPPFFDEIDQPPRSIENIEQARILAVLGDSVTTDHISPAGNIKKDSPAGRYLQEQGVDPKDFNSYGSRRGNHEVMMRGTFANIRIKNEMLGGEEGGNTIHIPSGDKLSIYDASMRYQQQKTPLVIVAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFIDEQSRQSLNLTGREVLSIHGLSDDIQPHQTLDVSVLREDGQQDQFKVLCRIDTLNEVEYFKAGGILHYVLRNLIAA
>NZ_CP032002.1|WP_005092262.1|2788739_2789933_-|MFS-transporter
MVLNQLPRYVYYLLVAQAFNLIAAVLSVTVSAIVGLKLAPTQTLATVPYGLQFLAMLLTTFIFSFLMKKLGRHLVFQFGCICLFLAGVFGYLALQSEQFYLLCLSHFSLGLFISTANFYRFAASDRLDSDLIPKATAMVISGGVVAAIIAPVLAIQFQQVQGLPDFTAIYLIFSVLALLLSPILYIWNQKFKLLQAQQVVTQSLQRAKLPINMIVVAVISGAFAYYVMNVMMIMSSLHLKEHHSFHYASISIQLHVLAMFVPSFFVSKLIQRWGTHRTIYIGFILLMLSSLIPIFGQEGIYINIALIILGVGWNFAYSGASTLLAGLNDQQKHRVQGMNETTIALFATLGAFLPAPILTKLGWMNANLLALSISVVIFIILMILSGRHRSAIKVSST
>NZ_CP032002.1|WP_005092264.1|2787885_2788677_-|tRNA-threonylcarbamoyladenosine-dehydratase
MTDLPVNDEYDRRFAGVAKIYGESSFSHYENSHVMVIGVGGVGSWAVEALARTGIGELTIVDMDVVAASNINRQLPAMTSTLGQEKIEVMAERCRQINPRMTVNIIDDYLTPENVKEILNPTPDIILDCIDDVKAKLALMLHCRFNKIPLIVSGGAGGKLDPLKIRVADLSKTEQDPMLAKLRAQLRSKGICKKPKEKFGITCVYSIDNPFSNTEACSTSEDTAFNPSAGLRCGGYGSAVVVTSSFAMVAVAEVLKKLDTKKG
>NZ_CP032002.1|WP_004637913.1|2787407_2787863_+|CHAP-domain-containing-protein
MIYDAPSVDHSMVHTPPHQLIVTTPKQPAIDVMTFAQKLTRRASYRSSSQCARFVRIALQAAGANIVNHPVAASDWGRTLQDIGYKKISPAFDNPQKGDIYIIHRTAKHRYGHIAGFSGTQWISDFKQRSHDIYKDKNVTYSYYRLSSNYI
>NZ_CP032002.1|WP_160124045.1|2802194_2802323_+|hypothetical-protein
MLHFAKNLEQTSWQKQDRSSFHRSLNRMLTGSTYLYYHRNYK
>NZ_CP032002.1|WP_008942208.1|2802328_2802679_+|transposase
MRAYSLDLRKKVMAAYRQTNHKSNVCKQFNIARSTLDNWILLEKTTQNLIPIPAVRNGRAFTIKNLESFKAFVETTPFTQISDLLEPFEEKFGYRISYSILWRGLEKIGKVKKQRK
>NZ_CP032002.1|WP_004637901.1|2802683_2803508_-|hypothetical-protein
MSKDTSTLVVSEDTMLSHDTETTLEHVVSIMPQLIHWLIKSGIGYNEFSTALKALFYNEAIKELDAIKQKKTDSAISLLSGLNRRDVRSFCQSYGEYQLVNQFDLQLPISVPARVIGMWINQKLPQQIPFQGDQYSFENLVKQVSSEKHPKSILLELKRLGIVIEEEDNIVLQNSSFTPDPQADESKQLFTQNISDHLSAGISNLTKNSNFLEQAIFADELSQESVEKLNQLSVDLWNLMSKAIISAAIDYCKLDENDPEAKKRFRLGVYQYDE
>NZ_CP032002.1|WP_001223318.1|2803980_2804682_+|IS1-like-element-ISPa14-family-transposase
MRITLEIKCPTCLSDSIKKNGIKVDGKQNYQCKDCKRQFIGDHALSYLGCNSGITRKILQLMVRGSGIRDIAEVERISIGKVLRTLTESTYQIQPKQSHYESLEVDEFWTFVGNKNNKQWLIYAYHRETGEIVAYVWGKRDLATVQRLKTKLKQLGIHYTRIASDHWDSFITAFKNCKQSIGKFFTVGIEGNNCKIRHRIRRGFRRSCNFSKKIENHFKAFDLTFFYINNGFI
>NZ_CP032002.1|WP_020846310.1|2804782_2805715_+|IS5-family-transposase
MKKPTHKIYRTTNWPAYNRALMSRGNIAIWFDPATQWYAPSKGKQGRNQTYSDAAIQCCLMIKSLFRLSLRMVTGFVQSLIKLCGLNWTAPDYSTLCRRQKHIDIAISYQKSSDGLHLLIDSTGMKFLGEGEWKRKKHGPEYRRQWRKLHIGIDAETLQIRAIQLTTNNVSDSQVLGDLLDQIPQDEQIDSVYTDGAYDTKQCRQVIADRQAHAVIPPRKNAKPWKDTKISSLERNELLRTVKRLGRRLWKKWSGYHRRSLVETKMHCIKLLGDKLMARSFPSQVNEIHARVAVLNRFTELGRPLTQVTP
>NZ_CP032002.1|WP_008942207.1|2806171_2806567_+|carboxymuconolactone-decarboxylase-family-protein
MSQQDYENGLKVRTEVMGESFVKRAQDNTVPFTEPLQSWINEHAWGSTWQREGVLPRKYRSLVTIAFLTALKSPTELKGHIRGALNNGASVEEIQEVLLHSLPYCGAPATQEAFRAALEVINEYQPESTHK
>NZ_CP032002.1|WP_008942206.1|2806726_2808238_+|hypothetical-protein
MSKKIQSNRDGIQFPIPSGRKVPSTTQTAKQILKSALQSVDSPYASKLIAEKNWRKNYPVYFQELVKAGIESVDHPIRIAQSGLEAAKASFNFNRAEQNDALSHAMANIKDQPFERFILKGTGSSTIEPWFIPYHGKKLQGEALLQQIDLWEQQQVIEPSHAKALRLLNQHPEWFDLSKRTMVLFGAGSEAGPLSWLAKWRANIVAIDLPNPAIWEKITKVIETGNATLIAPQISTTKDGQQLGANLLTQTPEIANWLNTFSETLDLAGIAYLDGEKHVRVSIAMISIMEQVSQHKPDSSIMFMLTPTDIYAIPKAVVHSIQNKIKQRPIVEKLLTKSIHNISLSNFFKPNLKQLIQSDNGQQYGISDCMVIEQGPNYALAKRLQQWFAISARARGQKTVINIAPSTTTHSVVKNPILKAAFSGADLFKVETFSPETTNAIMAALWVHDLNNPESATNPEKVLDHPLELIMENANHGGLWHVPYLARTALPFAAAYGWVREKL
>NZ_CP032002.1|WP_008942205.1|2808532_2809240_+|hypothetical-protein
MFKLKSQLLKLVLSFTALSISMQLFAGRPMHVDDASVVDAKSCQLEMWMQKHADDREYWSIPACNFGSNFELALGMGRTDTDQADPQNYAVLQAKTLLKALETNSWGIGLVTGSQFNVNDSTDQIWYTSVPVSLSIMDDAFIVHANLGWSHEKQDHRNFFTWGVGSETQVAPRLALTTELYGNDRKESFVQTGFRYMLRKDRIQLDTSYGKQLQRSKQSDFFSLGLVLYSSALLP
>NZ_CP032002.1|WP_008942204.1|2809469_2810615_+|alpha/beta-fold-hydrolase
MTQLPKVKRNLLGSQAAQKIFSSRTAQRTQHVFTNAADRILRGHQLVLSGKTPFDVIYQREIISLRHYTAHSDQSPRHRIPLVIVPPLAANMLIYDLFPHRSLVRYFLAQGFDVYLIDWGSPSLHQAKYNLGTYVKTFMPDFIEKVREHSGQQQLSLYGWSLGGALSLCYTALFKDKNIQNLLILASPINTHKSGYMGKFYQRLTIPAKWIRNNTNFRIRQIPSRVFHIHGWQNTLGFKLTDPIGNVKNYWELLKNLNDRQFVINHATSSSFVDNMLAYPGGVMRDIIIRFWIDNELSTGRVQFGDQVANLKDIDCSVLAIGGDTDIIVTAEAVRPLMDLISSEDKQFKIVAGGHMGLVSGNQAPQAVWPVVNQWLAERSD
>NZ_CP032002.1|WP_005089444.1|2812142_2813075_-|IS5-family-transposase
MKKPAPKIYRTTNWSSYNQALIKRGNISIWFDPKTQWYAQPQGKHGRNQTYSDTAIQCCLMIKSLFRLSLRMVTGFAQSLIKLCGLNWTAPDYSTLCRRQKHIDIAISYQKSREGLHLLVDSTGLKFLGEGEWKRKKHQPEYHRQWRKLHIGIDAKTLQIRAVQLTTNNISDSQVLGDLLNQIPLDEQIDSVYTDGAYDTKQCRQVIADRQAYAVIPPRKNAKPWKDNKVHSRERNELLRTVKRFGRTLWKKWSGYHRRSLVETKMHCIKLLSDKLSARSFQSQVNEVHARIAILNKFTELGRPHTQVVP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP032002_2	2.1\|454900\|21\|NZ_CP032002\|CRT	454900-454920	21	NZ_CP032002.1	454102-454122	0	1.0
NZ_CP032002_2	2.3\|455017\|24\|NZ_CP032002\|CRT	455017-455040	24	NZ_CP032002.1	454339-454362	0	1.0
NZ_CP032002_2	2.3\|455017\|24\|NZ_CP032002\|CRT	455017-455040	24	NZ_CP032002.1	454399-454422	0	1.0
NZ_CP032002_2	2.4\|455077\|24\|NZ_CP032002\|CRT	455077-455100	24	NZ_CP032002.1	454219-454242	0	1.0
NZ_CP032002_2	2.5\|455137\|24\|NZ_CP032002\|CRT	455137-455160	24	NZ_CP032002.1	454339-454362	0	1.0
NZ_CP032002_2	2.5\|455137\|24\|NZ_CP032002\|CRT	455137-455160	24	NZ_CP032002.1	454399-454422	0	1.0
NZ_CP032002_2	2.6\|455197\|24\|NZ_CP032002\|CRT	455197-455220	24	NZ_CP032002.1	454339-454362	0	1.0
NZ_CP032002_2	2.6\|455197\|24\|NZ_CP032002\|CRT	455197-455220	24	NZ_CP032002.1	454399-454422	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP032002.1	1675850-1675884	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP032002.1	3337075-3337109	0	1.0
NZ_CP032002_2	2.2\|454957\|24\|NZ_CP032002\|CRT	454957-454980	24	NZ_CP032002.1	454279-454302	1	0.958
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP032002.1	937263-937297	1	0.971
NZ_CP032002_2	2.3\|455017\|24\|NZ_CP032002\|CRT	455017-455040	24	NZ_CP032002.1	454159-454182	2	0.917
NZ_CP032002_2	2.3\|455017\|24\|NZ_CP032002\|CRT	455017-455040	24	NZ_CP032002.1	454219-454242	2	0.917
NZ_CP032002_2	2.4\|455077\|24\|NZ_CP032002\|CRT	455077-455100	24	NZ_CP032002.1	454159-454182	2	0.917
NZ_CP032002_2	2.4\|455077\|24\|NZ_CP032002\|CRT	455077-455100	24	NZ_CP032002.1	454339-454362	2	0.917
NZ_CP032002_2	2.4\|455077\|24\|NZ_CP032002\|CRT	455077-455100	24	NZ_CP032002.1	454399-454422	2	0.917
NZ_CP032002_2	2.5\|455137\|24\|NZ_CP032002\|CRT	455137-455160	24	NZ_CP032002.1	454159-454182	2	0.917
NZ_CP032002_2	2.5\|455137\|24\|NZ_CP032002\|CRT	455137-455160	24	NZ_CP032002.1	454219-454242	2	0.917
NZ_CP032002_2	2.6\|455197\|24\|NZ_CP032002\|CRT	455197-455220	24	NZ_CP032002.1	454159-454182	2	0.917
NZ_CP032002_2	2.6\|455197\|24\|NZ_CP032002\|CRT	455197-455220	24	NZ_CP032002.1	454219-454242	2	0.917

1. spacer 2.1|454900|21|NZ_CP032002|CRT matches to position: 454102-454122, mismatch: 0, identity: 1.0

gagggctaccgccatcaccac	CRISPR spacer
gagggctaccgccatcaccac	Protospacer
*********************

2. spacer 2.3|455017|24|NZ_CP032002|CRT matches to position: 454339-454362, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

3. spacer 2.3|455017|24|NZ_CP032002|CRT matches to position: 454399-454422, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

4. spacer 2.4|455077|24|NZ_CP032002|CRT matches to position: 454219-454242, mismatch: 0, identity: 1.0

gcggactaccatcgccgccaatgc	CRISPR spacer
gcggactaccatcgccgccaatgc	Protospacer
************************

5. spacer 2.5|455137|24|NZ_CP032002|CRT matches to position: 454339-454362, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

6. spacer 2.5|455137|24|NZ_CP032002|CRT matches to position: 454399-454422, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

7. spacer 2.6|455197|24|NZ_CP032002|CRT matches to position: 454339-454362, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

8. spacer 2.6|455197|24|NZ_CP032002|CRT matches to position: 454399-454422, mismatch: 0, identity: 1.0

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
************************

9. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to position: 1675850-1675884, mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

10. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to position: 3337075-3337109, mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

11. spacer 2.2|454957|24|NZ_CP032002|CRT matches to position: 454279-454302, mismatch: 1, identity: 0.958

gaggactaccgtcaccgccaatgc	CRISPR spacer
gaggactaccatcaccgccaatgc	Protospacer
**********.*************

12. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to position: 937263-937297, mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

13. spacer 2.3|455017|24|NZ_CP032002|CRT matches to position: 454159-454182, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcgggctaccatcaccgccaatgc	Protospacer
****.*****.*************

14. spacer 2.3|455017|24|NZ_CP032002|CRT matches to position: 454219-454242, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccatcgccgccaatgc	Protospacer
**********.**.**********

15. spacer 2.4|455077|24|NZ_CP032002|CRT matches to position: 454159-454182, mismatch: 2, identity: 0.917

gcggactaccatcgccgccaatgc	CRISPR spacer
gcgggctaccatcaccgccaatgc	Protospacer
****.********.**********

16. spacer 2.4|455077|24|NZ_CP032002|CRT matches to position: 454339-454362, mismatch: 2, identity: 0.917

gcggactaccatcgccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
**********.**.**********

17. spacer 2.4|455077|24|NZ_CP032002|CRT matches to position: 454399-454422, mismatch: 2, identity: 0.917

gcggactaccatcgccgccaatgc	CRISPR spacer
gcggactaccgtcaccgccaatgc	Protospacer
**********.**.**********

18. spacer 2.5|455137|24|NZ_CP032002|CRT matches to position: 454159-454182, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcgggctaccatcaccgccaatgc	Protospacer
****.*****.*************

19. spacer 2.5|455137|24|NZ_CP032002|CRT matches to position: 454219-454242, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccatcgccgccaatgc	Protospacer
**********.**.**********

20. spacer 2.6|455197|24|NZ_CP032002|CRT matches to position: 454159-454182, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcgggctaccatcaccgccaatgc	Protospacer
****.*****.*************

21. spacer 2.6|455197|24|NZ_CP032002|CRT matches to position: 454219-454242, mismatch: 2, identity: 0.917

gcggactaccgtcaccgccaatgc	CRISPR spacer
gcggactaccatcgccgccaatgc	Protospacer
**********.**.**********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	51047-51081	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	108713-108747	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	118309-118343	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP040051	Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence	104910-104944	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	MK531540	Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence	56902-56936	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP027185	Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence	20245-20279	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP027185	Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence	23639-23673	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP031985	Acinetobacter haemolyticus strain AN3 plasmid pAhaemAN3c, complete sequence	8973-9007	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP033546	Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-1, complete sequence	157773-157807	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_AP014650	Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence	54175-54209	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP023025	Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence	47874-47908	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP034093	Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence	86443-86477	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP041590	Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence	52391-52425	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP012007	Acinetobacter baumannii strain Ab04-mff plasmid pAB04-1, complete sequence	56858-56892	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP033769	Acinetobacter baumannii strain FDAARGOS_533 plasmid unnamed1, complete sequence	23197-23231	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	MK531536	Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence	84512-84546	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP026128	Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence	43289-43323	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	107108-107142	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	111472-111506	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	127470-127504	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP050433	Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence	60107-60141	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP050386	Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence	130373-130407	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP018333	Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence	110251-110285	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP051864	Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence	14674-14708	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP051864	Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence	48223-48257	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP042210	Acinetobacter baumannii strain DS002 plasmid pTS134338, complete sequence	100501-100535	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP014652	Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence	53290-53324	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP014652	Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence	57654-57688	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP014652	Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence	73146-73180	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NC_023031	Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence	55365-55399	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP026416	Acinetobacter sp. ACNIH2 plasmid pACI-3569, complete sequence	68782-68816	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP026416	Acinetobacter sp. ACNIH2 plasmid pACI-3569, complete sequence	80800-80834	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP028139	Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence	106597-106631	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	91433-91467	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	107432-107466	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	111796-111830	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_AP018825	Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence	12202-12236	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_AP018825	Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence	24224-24258	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP020596	Acinetobacter baumannii strain HWBA8 plasmid pHWBA8_1, complete sequence	154871-154905	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP040260	Acinetobacter baumannii strain P7774 plasmid unnamed1, complete sequence	134916-134950	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP027182	Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence	21608-21642	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP027182	Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence	25002-25036	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_KT779035	Acinetobacter baumannii strain D4 plasmid pD4, complete sequence	101426-101460	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP022285	Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence	105000-105034	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_MK323043	Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence	127728-127762	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP025619	Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence	54746-54780	0	1.0
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP031985	Acinetobacter haemolyticus strain AN3 plasmid pAhaemAN3c, complete sequence	12392-12426	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP051864	Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence	17297-17331	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP051864	Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence	50846-50880	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP038645	Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence	35337-35371	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP039519	Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence	40822-40856	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP033517	Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence	68389-68423	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP019144	Acinetobacter lwoffii strain ZS207 plasmid pmZS, complete sequence	175548-175582	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP016301	Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence	626-660	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP016296	Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence	626-660	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP016299	Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence	626-660	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP024125	Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence	38646-38680	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP033864	Acinetobacter sp. FDAARGOS_560 plasmid unnamed2	63631-63665	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP010398	Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence	46878-46912	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP015484	Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence	48938-48972	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP046295	Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence	141546-141580	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP020585	Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence	47413-47447	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	CP031744	Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence	48939-48973	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP050905	Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence	54833-54867	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NC_020524	Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence	48939-48973	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP021327	Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence	257-291	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_MK386680	Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence	87012-87046	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP018257	Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence	63738-63772	1	0.971
NZ_CP032002_3	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	NZ_CP010780	Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence	8314-8348	1	0.971
NZ_CP032002_2	2.1\|454900\|21\|NZ_CP032002\|CRT	454900-454920	21	NZ_CP050090	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence	131056-131076	2	0.905
NZ_CP032002_2	2.3\|455017\|24\|NZ_CP032002\|CRT	455017-455040	24	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	29-52	3	0.875
NZ_CP032002_2	2.5\|455137\|24\|NZ_CP032002\|CRT	455137-455160	24	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	29-52	3	0.875
NZ_CP032002_2	2.6\|455197\|24\|NZ_CP032002\|CRT	455197-455220	24	NZ_CP020084	Blastomonas fulva strain T2 plasmid unnamed, complete sequence	29-52	3	0.875
NZ_CP032002_2	2.4\|455077\|24\|NZ_CP032002\|CRT	455077-455100	24	NZ_CP022999	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence	663881-663904	4	0.833
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	251765-251795	6	0.806
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	78192-78222	6	0.806
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	35560-35590	6	0.806
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	251765-251795	6	0.806
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	78192-78222	6	0.806
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	35560-35590	6	0.806
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	538395-538425	8	0.742
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	537102-537132	8	0.742
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	MF360958	Salicola phage SCTP-2, complete genome	350083-350113	8	0.742
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	JN638751	Bacillus phage G, complete genome	28054-28084	8	0.742
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	538395-538425	8	0.742
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	537102-537132	8	0.742
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	MF360958	Salicola phage SCTP-2, complete genome	350083-350113	8	0.742
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	JN638751	Bacillus phage G, complete genome	28054-28084	8	0.742
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	334904-334934	9	0.71
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	U28974	Spiroplasma phage 1-C74, complete genome	6606-6636	9	0.71
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NC_008573	Shewanella sp. ANA-3 plasmid unnamed1, complete sequence	90618-90648	9	0.71
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	MN693285	Marine virus AFVG_25M368, complete genome	25310-25340	9	0.71
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_LR134399	Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence	334904-334934	9	0.71
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	U28974	Spiroplasma phage 1-C74, complete genome	6606-6636	9	0.71
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NC_008573	Shewanella sp. ANA-3 plasmid unnamed1, complete sequence	90618-90648	9	0.71
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	MN693285	Marine virus AFVG_25M368, complete genome	25310-25340	9	0.71
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	6220-6250	10	0.677
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	138806-138836	10	0.677
NZ_CP032002_4	4.1\|2000877\|31\|NZ_CP032002\|CRT	2000877-2000907	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	182627-182657	10	0.677
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	6220-6250	10	0.677
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	138806-138836	10	0.677
NZ_CP032002_4	4.4\|2000878\|31\|NZ_CP032002\|PILER-CR	2000878-2000908	31	NZ_CP044166	Campylobacter coli strain AR-0416 plasmid pAR-0416	182627-182657	10	0.677

1. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

2. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

3. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

4. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP040051 (Acinetobacter baumannii strain VB16141 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

5. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to MK531540 (Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

6. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP027185 (Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

7. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP027185 (Acinetobacter baumannii strain AR_0052 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

8. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP031985 (Acinetobacter haemolyticus strain AN3 plasmid pAhaemAN3c, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

9. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP033546 (Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

10. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_AP014650 (Acinetobacter baumannii strain IOMTU433 plasmid pIOMTU433, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

11. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP023025 (Acinetobacter baumannii strain 10324 plasmid pAba10324c, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

12. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP034093 (Acinetobacter baumannii strain A52 plasmid pA52-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

13. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP041590 (Acinetobacter baumannii strain J9 plasmid pJ9-3, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

14. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP012007 (Acinetobacter baumannii strain Ab04-mff plasmid pAB04-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

15. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP033769 (Acinetobacter baumannii strain FDAARGOS_533 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

16. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to MK531536 (Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

17. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP026128 (Acinetobacter baumannii strain ABNIH28 plasmid pABA-1fe1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

18. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

19. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

20. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

21. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP050433 (Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

22. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP050386 (Acinetobacter baumannii strain VB82 plasmid pVB82_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

23. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP018333 (Acinetobacter baumannii strain A1296 isolate A1296 plasmid pA1296_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

24. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP051864 (Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

25. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP051864 (Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

26. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP042210 (Acinetobacter baumannii strain DS002 plasmid pTS134338, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

27. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

28. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

29. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

30. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NC_023031 (Acinetobacter baumannii ZW85-1 plasmid ZW85p2, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

31. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP026416 (Acinetobacter sp. ACNIH2 plasmid pACI-3569, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

32. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP026416 (Acinetobacter sp. ACNIH2 plasmid pACI-3569, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

33. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP028139 (Acinetobacter baumannii strain NCIMB 8209 plasmid pAbNCIMB8209_134, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

34. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

35. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

36. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

37. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_AP018825 (Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

38. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_AP018825 (Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

39. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP020596 (Acinetobacter baumannii strain HWBA8 plasmid pHWBA8_1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

40. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP040260 (Acinetobacter baumannii strain P7774 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

41. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP027182 (Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

42. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP027182 (Acinetobacter baumannii strain AR_0070 plasmid unnamed4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

43. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_KT779035 (Acinetobacter baumannii strain D4 plasmid pD4, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

44. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP022285 (Acinetobacter baumannii strain 7804 plasmid pAba7804b, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

45. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_MK323043 (Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

46. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP025619 (Acinetobacter schindleri strain SGAir0122 plasmid pSGAir0122, complete sequence) position: , mismatch: 0, identity: 1.0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

47. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP031985 (Acinetobacter haemolyticus strain AN3 plasmid pAhaemAN3c, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

48. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP051864 (Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
cgaattctgttcaaatgagcagagtgttatctttt	Protospacer
.**********************************

49. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP051864 (Acinetobacter baumannii strain Ab-C102 plasmid pAb-C102_2, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
cgaattctgttcaaatgagcagagtgttatctttt	Protospacer
.**********************************

50. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP038645 (Acinetobacter baumannii strain ACN21 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

51. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP039519 (Acinetobacter baumannii strain TG22653 plasmid pTG22653, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

52. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP033517 (Acinetobacter baumannii strain 2008S11-069 plasmid p2008S11-069-1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

53. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP019144 (Acinetobacter lwoffii strain ZS207 plasmid pmZS, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

54. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP016301 (Acinetobacter baumannii strain CMC-CR-MDR-Ab66 plasmid pCMCVTAb1-Ab66, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

55. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP016296 (Acinetobacter baumannii strain CMC-CR-MDR-Ab4 plasmid pCMCVTAb1-Ab4, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

56. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP016299 (Acinetobacter baumannii strain CMC-MDR-Ab59 plasmid pCMCVTAb1-Ab59, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

57. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP024125 (Acinetobacter baumannii strain AYP-A2 plasmid pAYP-A2, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

58. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP033864 (Acinetobacter sp. FDAARGOS_560 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

59. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP010398 (Acinetobacter baumannii strain 6200 plasmid p6200-114.848kb, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

60. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP015484 (Acinetobacter baumannii strain ORAB01 plasmid pORAB01-1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

61. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP046295 (Acinetobacter lwoffii strain FDAARGOS_552 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

62. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP020585 (Acinetobacter baumannii strain CBA7 plasmid pCBA7_1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

63. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to CP031744 (Acinetobacter baumannii WM99c plasmid pWM99c-2, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

64. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP050905 (Acinetobacter baumannii strain DT-Ab057 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

65. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NC_020524 (Acinetobacter baumannii MDR-TJ plasmid pABTJ2, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

66. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP021327 (Acinetobacter baumannii strain XH386 plasmid pXH386, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

67. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_MK386680 (Acinetobacter baumannii strain ABAY04001 plasmid pABAY04001_1A, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

68. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP018257 (Acinetobacter baumannii strain AF-673 plasmid pAF-673, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

69. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP010780 (Acinetobacter baumannii strain XH386 plasmid pAB386, complete sequence) position: , mismatch: 1, identity: 0.971

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttgtctttt	Protospacer
****************************.******

70. spacer 2.1|454900|21|NZ_CP032002|CRT matches to NZ_CP050090 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence) position: , mismatch: 2, identity: 0.905

gagggctaccgccatcaccac	CRISPR spacer
cagggctaccgccatcaccat	Protospacer
 *******************.

71. spacer 2.3|455017|24|NZ_CP032002|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

gcggactaccgtcaccgccaatgc	CRISPR spacer
ccggactaccttcatcgccaatgc	Protospacer
 ********* ***.*********

72. spacer 2.5|455137|24|NZ_CP032002|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

gcggactaccgtcaccgccaatgc	CRISPR spacer
ccggactaccttcatcgccaatgc	Protospacer
 ********* ***.*********

73. spacer 2.6|455197|24|NZ_CP032002|CRT matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

gcggactaccgtcaccgccaatgc	CRISPR spacer
ccggactaccttcatcgccaatgc	Protospacer
 ********* ***.*********

74. spacer 2.4|455077|24|NZ_CP032002|CRT matches to NZ_CP022999 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-A, complete sequence) position: , mismatch: 4, identity: 0.833

gcggactaccatcgccgccaatgc	CRISPR spacer
gcggactaccatcgccgccggctc	Protospacer
*******************... *

75. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

76. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

77. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

78. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

79. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

80. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 6, identity: 0.806

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ttcattttatttaatgtttctaatgtacata	Protospacer
**************  **********..*

81. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctgattttatttaaactttccaatggggtct	Protospacer
.* *****************.**** *   .

82. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctgattttatttaaactttccaatggggtct	Protospacer
.* *****************.**** *   .

83. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
accattatatttaaacgttctaatgtaaatt	Protospacer
 .**** ********* *********. * .

84. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
atcattttcttttaactttctaatttcttca	Protospacer
 ******* *** *********** * *

85. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctgattttatttaaactttccaatggggtct	Protospacer
.* *****************.**** *   .

86. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctgattttatttaaactttccaatggggtct	Protospacer
.* *****************.**** *   .

87. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to MF360958 (Salicola phage SCTP-2, complete genome) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
accattatatttaaacgttctaatgtaaatt	Protospacer
 .**** ********* *********. * .

88. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 8, identity: 0.742

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
atcattttcttttaactttctaatttcttca	Protospacer
 ******* *** *********** * *

89. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
aatgtttcatttaaactttctaatgtcgcgg	Protospacer
  ..***.******************   *

90. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to U28974 (Spiroplasma phage 1-C74, complete genome) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctcatttaatttaaactttctaaatcattaa	Protospacer
.****** ***************  ..* .

91. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ccgctttcatttaaactttcaaatgtgggga	Protospacer
..  ***.************ ****** .*

92. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to MN693285 (Marine virus AFVG_25M368, complete genome) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
tttattttatttaaactttcaaaattactat	Protospacer
**.***************** **  *.. ..

93. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_LR134399 (Listeria monocytogenes strain NCTC7974 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
aatgtttcatttaaactttctaatgtcgcgg	Protospacer
  ..***.******************   *

94. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to U28974 (Spiroplasma phage 1-C74, complete genome) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ctcatttaatttaaactttctaaatcattaa	Protospacer
.****** ***************  ..* .

95. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NC_008573 (Shewanella sp. ANA-3 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
ccgctttcatttaaactttcaaatgtgggga	Protospacer
..  ***.************ ****** .*

96. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to MN693285 (Marine virus AFVG_25M368, complete genome) position: , mismatch: 9, identity: 0.71

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
tttattttatttaaactttcaaaattactat	Protospacer
**.***************** **  *.. ..

97. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

98. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

99. spacer 4.1|2000877|31|NZ_CP032002|CRT matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

100. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

101. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

102. spacer 4.4|2000878|31|NZ_CP032002|PILER-CR matches to NZ_CP044166 (Campylobacter coli strain AR-0416 plasmid pAR-0416) position: , mismatch: 10, identity: 0.677

ttcattttatttaaactttctaatgtgtagc	CRISPR spacer
cctatttcatttaaagtttctaatgttctaa	Protospacer
...****.******* ********** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

838771 : 967387

100

Escherichia_phage(22.73%)

tRNA,protease,transposase,integrase

attL 893337:893362|attR 913700:913725

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005080957.1\|838771_840355_-\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	9.4e-144	54.0
WP_000618091.1\|840429_840765_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_001055585.1\|840761_841145_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_005082988.1\|842869_843325_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005082987.1\|843391_843820_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_017394512.1\|843950_844181_+	hypothetical protein	NA	NA	NA	NA
WP_005082982.1\|844402_844810_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_005082975.1\|846221_847934_-	flotillin family protein	NA	NA	NA	NA
WP_004640325.1\|847968_848613_-	YqiJ family protein	NA	NA	NA	NA
WP_004640323.1\|849018_850032_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004640320.1\|850200_851118_+	DUF808 domain-containing protein	NA	NA	NA	NA
WP_005081931.1\|851611_852544_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	8.7e-57	40.6
WP_160124190.1\|853249_867607_+	BapA prefix-like domain-containing protein	NA	NA	NA	NA
WP_020846312.1\|867737_869393_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
WP_125316946.1\|869404_872593_+	CapA family protein	NA	NA	NA	NA
WP_160124191.1\|872592_872895_+	hypothetical protein	NA	NA	NA	NA
WP_160124192.1\|872848_874045_+	hypothetical protein	NA	NA	NA	NA
WP_005084352.1\|874037_874775_-	hypothetical protein	NA	NA	NA	NA
WP_005084354.1\|874857_875172_+	MGMT family protein	NA	NA	NA	NA
WP_004640302.1\|875351_875789_-	universal stress protein	NA	NA	NA	NA
WP_004640300.1\|876014_876641_-	CatB-related O-acetyltransferase	NA	NA	NA	NA
WP_004640299.1\|876703_876919_-	hypothetical protein	NA	NA	NA	NA
WP_004640296.1\|877019_877496_-	transcription elongation factor GreA	NA	NA	NA	NA
WP_005084359.1\|877588_880822_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_004640293.1\|880836_881976_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	NA	NA	NA
WP_004640291.1\|882336_882879_+	hypothetical protein	NA	NA	NA	NA
WP_005084362.1\|882931_883468_-	DOMON-like domain-containing protein	NA	NA	NA	NA
WP_004640287.1\|883473_883800_-	ribosome assembly RNA-binding protein YhbY	NA	NA	NA	NA
WP_004640284.1\|884064_884715_+	23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE	NA	NA	NA	NA
WP_160124349.1\|884739_885768_-\|transposase	transposase	NA	NA	NA	NA
WP_004640283.1\|885958_887854_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	M4QMW8	Micromonas_pusilla_virus	2.6e-108	46.8
WP_005084367.1\|887987_888839_+	dihydropteroate synthase	NA	NA	NA	NA
WP_005084369.1\|888965_890585_+	VWA domain-containing protein	NA	NA	NA	NA
WP_171057132.1\|890718_891009_+	hypothetical protein	NA	NA	NA	NA
WP_005084373.1\|891039_892638_-	alpha/beta hydrolase	NA	NA	NA	NA
893337:893362	attL	NA	NA	NA	NA
WP_087486619.1\|893376_894596_-\|transposase	IS3-like element ISAba19 family transposase	A0A0N7C1X7	Escherichia_phage	1.8e-78	51.5
WP_005084378.1\|895501_896104_+	nicotinamide mononucleotide transporter	K4FAY9	Cronobacter_phage	4.8e-08	29.9
WP_005084380.1\|896153_897293_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_005084382.1\|897499_899113_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_005084384.1\|899454_902556_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_004640257.1\|902835_904173_+	magnesium transporter	NA	NA	NA	NA
WP_005084386.1\|904249_904828_+	DUF4112 domain-containing protein	NA	NA	NA	NA
WP_004640254.1\|904890_905796_-\|protease	protease HtpX	NA	NA	NA	NA
WP_161414322.1\|906013_906790_-	transglycosylase SLT domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	9.2e-36	53.7
WP_004640251.1\|907373_908279_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	3.1e-91	64.2
WP_004640249.1\|908475_908859_+	SCP2 sterol-binding domain-containing protein	NA	NA	NA	NA
WP_005084391.1\|908906_910016_-	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_125316950.1\|910390_910867_+	transcription elongation factor GreB	NA	NA	NA	NA
WP_005084955.1\|911232_912438_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	7.3e-64	38.5
WP_010326927.1\|912611_913637_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_160124193.1\|913750_914918_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.1e-71	52.2
913700:913725	attR	NA	NA	NA	NA
WP_001223318.1\|914911_915613_-\|transposase	IS1-like element ISPa14 family transposase	A0A218MNG1	uncultured_virus	9.9e-37	55.0
WP_160124350.1\|915809_916823_+	hypothetical protein	NA	NA	NA	NA
WP_005082417.1\|916869_917136_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_104470630.1\|918126_919346_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	7.6e-77	51.2
WP_160124194.1\|919358_919571_-	hypothetical protein	NA	NA	NA	NA
WP_160124195.1\|919576_920782_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_004669036.1\|921669_922506_+	hypothetical protein	NA	NA	NA	NA
WP_004669035.1\|922529_922850_-	pyrimidine/purine nucleoside phosphorylase	NA	NA	NA	NA
WP_005082424.1\|923383_924415_+	hypothetical protein	NA	NA	NA	NA
WP_004669030.1\|924419_924755_+	hypothetical protein	NA	NA	NA	NA
WP_004669028.1\|924877_925135_+	hypothetical protein	NA	NA	NA	NA
WP_004669027.1\|925147_925297_+	hypothetical protein	NA	NA	NA	NA
WP_160124196.1\|925358_925856_+	hypothetical protein	NA	NA	NA	NA
WP_160124197.1\|925871_926486_+	hypothetical protein	NA	NA	NA	NA
WP_005082429.1\|926560_926896_+	hypothetical protein	NA	NA	NA	NA
WP_160124198.1\|927002_927293_+	hypothetical protein	NA	NA	NA	NA
WP_160124199.1\|927319_928393_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	4.5e-57	38.1
WP_125503032.1\|928624_929752_+	YqaJ viral recombinase family protein	A0A139ZPJ9	Marinitoga_camini_virus	1.6e-41	42.1
WP_004880447.1\|929902_930799_+	hypothetical protein	NA	NA	NA	NA
WP_004880446.1\|930902_931175_-	hypothetical protein	NA	NA	NA	NA
WP_160124351.1\|931189_932071_-	CopD family protein	NA	NA	NA	NA
WP_125317011.1\|932138_932519_-	copper resistance protein CopC	NA	NA	NA	NA
WP_160124200.1\|932668_933812_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_125317012.1\|934036_935111_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.3e-45	40.8
WP_125317040.1\|935822_936806_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_125317013.1\|937497_938913_+	anthranilate 1,2-dioxygenase large subunit	NA	NA	NA	NA
WP_125317014.1\|938915_939407_+	anthranilate 1,2-dioxygenase small subunit	NA	NA	NA	NA
WP_125317015.1\|939417_940449_+	anthranilate 1,2-dioxygenase electron transfer component AntC	NA	NA	NA	NA
WP_160124201.1\|940830_941991_+	outer membrane protein transport protein	NA	NA	NA	NA
WP_160124202.1\|942018_942744_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_160124203.1\|943171_944497_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_160124200.1\|945051_946196_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_005243610.1\|946952_947591_+	hypothetical protein	NA	NA	NA	NA
WP_005243609.1\|947671_948979_+	MFS transporter	NA	NA	NA	NA
WP_005243607.1\|949142_950495_-	chromate efflux transporter	A0A219VHC2	Ochrobactrum_phage	7.0e-31	68.8
WP_005243591.1\|950497_951418_-	chromate resistance protein	NA	NA	NA	NA
WP_005243577.1\|951634_951922_-	DUF2591 family protein	NA	NA	NA	NA
WP_005243575.1\|951933_952137_-	exodeoxyribonuclease VII	NA	NA	NA	NA
WP_005243573.1\|952129_953389_-	exodeoxyribonuclease VII large subunit	NA	NA	NA	NA
WP_005243572.1\|953553_953826_+	type II toxin-antitoxin system HigB family toxin	NA	NA	NA	NA
WP_005243569.1\|953815_955039_+	ImmA/IrrE family metallo-endopeptidase	A0A222YXG1	Escherichia_phage	4.1e-22	47.1
WP_100223926.1\|955390_956555_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_010590140.1\|957597_958980_+	AAA family ATPase	C7BGE8	Burkholderia_phage	4.5e-09	26.9
WP_005243563.1\|958963_959752_+	TIGR02646 family protein	NA	NA	NA	NA
WP_100223926.1\|960663_961828_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_001055585.1\|964015_964399_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|964395_964731_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_005080957.1\|964805_966389_+\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	9.4e-144	54.0
WP_020846310.1\|966454_967387_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9

DBSCAN-SWA_2

984232 : 1034479

Enterobacteria_phage(26.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020846310.1\|984232_985165_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_005084465.1\|985265_985916_+	hypothetical protein	NA	NA	NA	NA
WP_005084468.1\|985988_989675_-	methionine synthase	A0A140XBC7	Dickeya_phage	5.6e-14	60.0
WP_171057142.1\|990213_991743_+	inorganic phosphate transporter	NA	NA	NA	NA
WP_160124204.1\|991850_993069_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	3.5e-21	33.1
WP_020846310.1\|993097_994030_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_005086202.1\|994527_995598_-	Tim44 domain-containing protein	NA	NA	NA	NA
WP_005086199.1\|995680_997069_-	DNA repair protein RadA	NA	NA	NA	NA
WP_005086196.1\|997426_998926_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_005086194.1\|999258_999498_+	lipoprotein	NA	NA	NA	NA
WP_005086193.1\|999520_1000771_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_005086192.1\|1000776_1001631_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_004640183.1\|1001630_1002305_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_005086190.1\|1002301_1002913_-	LysE family translocator	NA	NA	NA	NA
WP_161414287.1\|1003069_1003957_+	tyrosine recombinase	A0A0K0MWE8	Gordonia_phage	9.6e-13	29.1
WP_005086189.1\|1004395_1005145_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_004952903.1\|1005162_1006095_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
WP_005086188.1\|1006210_1006726_+	DinB family protein	NA	NA	NA	NA
WP_005086186.1\|1007068_1009798_+	DNA gyrase subunit A	A0A172JHV7	Bacillus_phage	1.3e-92	28.5
WP_160124205.1\|1009822_1010935_-	ABC transporter permease	NA	NA	NA	NA
WP_004640160.1\|1010931_1012062_-	ABC transporter permease	NA	NA	NA	NA
WP_004757626.1\|1012065_1013226_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_008941743.1\|1013238_1014735_-	TolC family protein	NA	NA	NA	NA
WP_020846310.1\|1014923_1015856_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_005086184.1\|1016096_1017176_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.0e-89	49.6
WP_100222743.1\|1017280_1018505_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	4.6e-21	33.1
WP_004757630.1\|1018570_1018714_-	hypothetical protein	NA	NA	NA	NA
WP_005084475.1\|1018749_1019688_-	hypothetical protein	NA	NA	NA	NA
WP_004640146.1\|1019896_1020367_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_004640144.1\|1020374_1021268_+	EamA family transporter	NA	NA	NA	NA
WP_004640143.1\|1021282_1021867_-	PilZ domain-containing protein	NA	NA	NA	NA
WP_005084477.1\|1021892_1023128_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_004640139.1\|1023120_1023807_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	2.9e-33	37.8
WP_005084481.1\|1023890_1026329_+	DNA internalization-related competence protein ComEC/Rec2	M1PSD2	Streptococcus_phage	8.8e-16	45.9
WP_005084485.1\|1026317_1027274_-	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_005084487.1\|1027413_1028436_+	signal peptide peptidase SppA	A0A2I6UH21	Salinibacter_virus	5.0e-13	27.2
WP_005084488.1\|1028582_1029380_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_171055806.1\|1029426_1030056_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.5e-28	37.9
WP_004640125.1\|1030052_1031123_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.2e-78	46.7
WP_005084490.1\|1031256_1032453_+	AI-2E family transporter	NA	NA	NA	NA
WP_004640121.1\|1032473_1033172_+	chromosomal replication initiator protein DnaA	NA	NA	NA	NA
WP_125316983.1\|1033284_1033539_+	CSLREA domain-containing protein	NA	NA	NA	NA
WP_020846310.1\|1033546_1034479_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9

DBSCAN-SWA_3

1114377 : 1171092

uncultured_Caudovirales_phage(16.67%)

tRNA,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005084620.1\|1114377_1115403_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_004639978.1\|1115459_1116365_-	hydrogen peroxide-inducible genes activator	NA	NA	NA	NA
WP_171055803.1\|1116371_1117271_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_005084622.1\|1117403_1118585_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000760495.1\|1118661_1118826_-	rubredoxin	NA	NA	NA	NA
WP_005084625.1\|1119178_1119616_+	SRPBCC domain-containing protein	NA	NA	NA	NA
WP_005084627.1\|1119776_1121303_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.2e-89	39.1
WP_005084628.1\|1121456_1122908_+	capsule assembly Wzi family protein	NA	NA	NA	NA
WP_004639965.1\|1123234_1124143_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_005084633.1\|1124188_1125802_+	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	7.5e-40	27.4
WP_004639959.1\|1126001_1126517_+	hypothetical protein	NA	NA	NA	NA
WP_005084635.1\|1126565_1126829_+	ribosomal protein L7/L12	NA	NA	NA	NA
WP_005084636.1\|1126865_1128194_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_005084639.1\|1128299_1129289_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_026057263.1\|1129828_1131430_+	isocitrate lyase	NA	NA	NA	NA
WP_026057262.1\|1131514_1131982_-	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA
WP_005084644.1\|1132348_1133779_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	6.2e-54	31.3
WP_005084646.1\|1134054_1135032_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	8.9e-36	31.7
WP_004639946.1\|1135035_1135575_+	HAD-IIIA family hydrolase	NA	NA	NA	NA
WP_005084648.1\|1135619_1136168_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_005084650.1\|1136151_1136700_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_005084652.1\|1136699_1137446_+	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-21	26.9
WP_005084653.1\|1137635_1139171_+	TolC family protein	NA	NA	NA	NA
WP_005084655.1\|1139167_1141291_+	type I secretion system permease/ATPase	W8CYL7	Bacillus_phage	2.7e-29	24.5
WP_004639933.1\|1141303_1142494_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA
WP_005084657.1\|1142587_1143187_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	1.1e-20	38.4
WP_125316988.1\|1143179_1143794_+	acyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	8.1e-11	52.4
WP_005084661.1\|1143910_1144753_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	5.9e-36	33.9
WP_005084663.1\|1144872_1145541_-	O-methyltransferase	S5YRC3	Mycobacterium_phage	1.3e-25	36.7
WP_171057129.1\|1145675_1146332_-	peptidase M15	NA	NA	NA	NA
WP_004639922.1\|1146507_1146837_-	ferredoxin family protein	NA	NA	NA	NA
WP_160124352.1\|1147085_1147433_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_087486619.1\|1147486_1148705_+\|transposase	IS3-like element ISAba19 family transposase	A0A0N7C1X7	Escherichia_phage	1.8e-78	51.5
WP_005084669.1\|1149046_1151686_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	3.7e-36	22.0
WP_005084671.1\|1152304_1152523_+	hypothetical protein	NA	NA	NA	NA
WP_100223926.1\|1153065_1154231_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_160124208.1\|1155174_1156068_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010326927.1\|1156064_1157090_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_020846310.1\|1158775_1159708_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_026056278.1\|1160560_1160788_+	hypothetical protein	NA	NA	NA	NA
WP_004639899.1\|1160932_1161163_-	hypothetical protein	NA	NA	NA	NA
WP_004639896.1\|1161451_1162063_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	2.8e-48	55.3
WP_125316989.1\|1162067_1163366_+	Y-family DNA polymerase	A0A2H4JBL5	uncultured_Caudovirales_phage	9.8e-107	46.7
WP_125316990.1\|1163532_1164633_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_075315268.1\|1164900_1165551_+	hypothetical protein	NA	NA	NA	NA
WP_125316991.1\|1165568_1166534_+	D-glycerate dehydrogenase	M1NSB9	Streptococcus_phage	1.2e-16	28.2
WP_008942019.1\|1166635_1167223_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_075315274.1\|1167347_1168790_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_125316992.1\|1168849_1169344_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_005089750.1\|1169390_1169756_+	GFA family protein	NA	NA	NA	NA
WP_100222370.1\|1169963_1171092_+\|transposase	IS3-like element ISAcsp5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1188157 : 1252055

uncultured_Caudovirales_phage(21.43%)

tRNA,transposase,integrase

attL 1215936:1215989|attR 1237906:1237959

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_125317000.1\|1188157_1189291_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_075315305.1\|1189295_1189784_-	NUDIX hydrolase	NA	NA	NA	NA
WP_125317001.1\|1189886_1190345_-	hypothetical protein	NA	NA	NA	NA
WP_125317002.1\|1190360_1190900_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_005084817.1\|1190997_1192146_-	D-alanyl-D-alanine carboxypeptidase PBP5/6	B6DZZ7	Stx2-converting_phage	4.8e-65	38.1
WP_125317003.1\|1192298_1192694_-	hypothetical protein	NA	NA	NA	NA
WP_125317004.1\|1192873_1193236_+	hypothetical protein	NA	NA	NA	NA
WP_005084823.1\|1193375_1193747_-	hypothetical protein	NA	NA	NA	NA
WP_004639644.1\|1193899_1194673_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-54	45.3
WP_017396769.1\|1194783_1195614_+	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	2.6e-12	45.7
WP_005084828.1\|1195761_1196691_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_005084830.1\|1196755_1199389_-	ATP-binding protein	NA	NA	NA	NA
WP_005089847.1\|1199576_1201754_+	MFS transporter	NA	NA	NA	NA
WP_004639634.1\|1201756_1202158_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_005084835.1\|1202297_1203266_+	bile acid:sodium symporter	NA	NA	NA	NA
WP_004639630.1\|1203465_1203690_+	50S ribosomal protein L31	NA	NA	NA	NA
WP_017395546.1\|1203802_1205896_-	EAL domain-containing protein	NA	NA	NA	NA
WP_008941999.1\|1205877_1207632_-	hypothetical protein	NA	NA	NA	NA
WP_005089852.1\|1207645_1208662_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA
WP_004639622.1\|1208748_1209318_+	elongation factor P	NA	NA	NA	NA
WP_161409507.1\|1209583_1211614_+	carbon starvation protein A	NA	NA	NA	NA
WP_008941998.1\|1211600_1211903_+	YbdD/YjiX family protein	NA	NA	NA	NA
WP_005084848.1\|1211984_1212944_+	MoxR family ATPase	NA	NA	NA	NA
WP_005089857.1\|1212958_1213876_+	DUF58 domain-containing protein	NA	NA	NA	NA
WP_005089860.1\|1213880_1215872_+	DUF3488 domain-containing transglutaminase family protein	NA	NA	NA	NA
1215936:1215989	attL	NA	NA	NA	NA
WP_016543150.1\|1216190_1217213_+\|integrase	site-specific integrase	A0A0R6PHH4	Moraxella_phage	3.2e-68	43.8
WP_008941996.1\|1217237_1217540_-	hypothetical protein	NA	NA	NA	NA
WP_160124210.1\|1217888_1218584_-	hypothetical protein	NA	NA	NA	NA
WP_160124211.1\|1219087_1220035_+	MobA/MobL family protein	NA	NA	NA	NA
WP_016653652.1\|1220187_1221042_-	hypothetical protein	A0A2H4JC99	uncultured_Caudovirales_phage	2.1e-28	31.9
WP_016541972.1\|1221025_1221373_-	hypothetical protein	NA	NA	NA	NA
WP_016653653.1\|1221876_1222230_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_160124212.1\|1223070_1223679_+	hypothetical protein	NA	NA	NA	NA
WP_160124213.1\|1223770_1224535_+	hypothetical protein	NA	NA	NA	NA
WP_160124214.1\|1225310_1226606_-	DUF4113 domain-containing protein	A0A2H4JBL5	uncultured_Caudovirales_phage	7.4e-163	62.9
WP_023013911.1\|1226605_1227091_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	3.2e-42	56.1
WP_020846310.1\|1227318_1228251_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_160124215.1\|1228253_1229789_+	hypothetical protein	NA	NA	NA	NA
WP_010326927.1\|1229833_1230859_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	8.8e-26	30.7
WP_160124216.1\|1230855_1231326_+	hypothetical protein	NA	NA	NA	NA
WP_160124354.1\|1231601_1231877_-	hypothetical protein	NA	NA	NA	NA
WP_017480642.1\|1233738_1234188_-	cyanase	NA	NA	NA	NA
WP_008303564.1\|1234468_1235278_+	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_160124217.1\|1235329_1237054_+	protein kinase	D7F602	Apocheima_cinerarium_nucleopolyhedrovirus	1.2e-06	22.6
WP_005089862.1\|1238416_1238593_-	hypothetical protein	NA	NA	NA	NA
1237906:1237959	attR	NA	NA	NA	NA
WP_004639604.1\|1238931_1239141_+	hypothetical protein	NA	NA	NA	NA
WP_100223926.1\|1239520_1240686_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_161403048.1\|1240907_1241027_-	hypothetical protein	NA	NA	NA	NA
WP_004639601.1\|1241802_1242486_-	pirin family protein	NA	NA	NA	NA
WP_004639599.1\|1242678_1244022_-	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	7.6e-54	79.4
WP_004639597.1\|1244252_1244642_-	hypothetical protein	NA	NA	NA	NA
WP_004639596.1\|1244811_1246842_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_034589178.1\|1247228_1247612_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_160124218.1\|1247608_1247944_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_160124355.1\|1248018_1249665_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	8.8e-145	54.0
WP_125316971.1\|1249772_1251359_-	histidine-type phosphatase	A0A218MNG5	uncultured_virus	1.6e-103	60.9
WP_160124219.1\|1251671_1252055_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

1269364 : 1317372

Enterobacteria_phage(36.36%)

transposase,integrase

attL 1280338:1280354|attR 1311733:1311749

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160124235.1\|1269364_1270555_-\|integrase	tyrosine-type recombinase/integrase	B7SYF8	Stenotrophomonas_phage	2.1e-79	42.5
WP_160124236.1\|1270761_1271658_+	hydrolase or metal-binding protein	NA	NA	NA	NA
WP_100222370.1\|1273004_1274134_-\|transposase	IS3-like element ISAcsp5 family transposase	NA	NA	NA	NA
WP_000884834.1\|1274275_1275199_-	hypothetical protein	NA	NA	NA	NA
WP_000179851.1\|1275208_1275928_-	DUF3944 domain-containing protein	NA	NA	NA	NA
WP_171503501.1\|1276145_1277078_-	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_160124238.1\|1277029_1277167_-	DUF2559 family protein	NA	NA	NA	NA
WP_160124239.1\|1277468_1279754_+	N-6 DNA methylase	A0A220A2U5	Liberibacter_phage	1.7e-29	25.1
WP_160124240.1\|1279753_1281106_+	restriction endonuclease subunit S	NA	NA	NA	NA
1280338:1280354	attL	NA	NA	NA	NA
WP_160124241.1\|1281102_1284354_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_005324694.1\|1284441_1285374_+\|transposase	IS5-like element ISAba13 family transposase	Q1MVF0	Enterobacteria_phage	1.4e-54	39.6
WP_005324696.1\|1285603_1285834_+	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_005324697.1\|1286137_1287010_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_005324702.1\|1287025_1288378_-	pyrimidine utilization transport protein G	Q9KX94	Enterobacteria_phage	4.9e-149	67.1
WP_100223928.1\|1288409_1289000_-	pyrimidine utilization flavin reductase protein F	Q9KX93	Enterobacteria_phage	4.9e-21	54.2
WP_005324707.1\|1289066_1289450_-	pyrimidine utilization protein C	NA	NA	NA	NA
WP_005324717.1\|1289496_1290249_-	pyrimidine utilization protein B	NA	NA	NA	NA
WP_005064337.1\|1290245_1291364_-	pyrimidine utilization protein A	NA	NA	NA	NA
WP_005324718.1\|1291723_1292311_-	malonic semialdehyde reductase	NA	NA	NA	NA
WP_005324720.1\|1292307_1293114_-	pyrimidine utilization protein D	NA	NA	NA	NA
WP_017395975.1\|1295217_1296495_-\|integrase	site-specific integrase	A0A077KET4	Ralstonia_phage	8.3e-74	38.1
WP_125317005.1\|1296829_1298038_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	3.1e-62	38.2
WP_125317036.1\|1298123_1299176_-	hypothetical protein	NA	NA	NA	NA
WP_004671840.1\|1299546_1299810_-	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_125317037.1\|1299793_1300057_-	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_125317006.1\|1300473_1300740_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_160124242.1\|1300833_1301874_-	hypothetical protein	NA	NA	NA	NA
WP_001055585.1\|1302127_1302511_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_000618091.1\|1302507_1302843_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_005080957.1\|1302917_1304501_+\|transposase	IS66-like element ISAba25 family transposase	A0A218MNE7	uncultured_virus	9.4e-144	54.0
WP_020846310.1\|1306342_1307275_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_160124243.1\|1307558_1307879_-	DUF1255 family protein	NA	NA	NA	NA
WP_160124244.1\|1308497_1309613_+	hypothetical protein	NA	NA	NA	NA
WP_160124245.1\|1309605_1309965_+	hypothetical protein	NA	NA	NA	NA
WP_160124246.1\|1310087_1310273_+	hypothetical protein	NA	NA	NA	NA
WP_171503417.1\|1310932_1311106_+	hypothetical protein	NA	NA	NA	NA
WP_160124247.1\|1311127_1311817_+	hypothetical protein	NA	NA	NA	NA
1311733:1311749	attR	NA	NA	NA	NA
WP_160124248.1\|1311857_1312502_+	hypothetical protein	NA	NA	NA	NA
WP_160124356.1\|1312628_1312955_+	hypothetical protein	NA	NA	NA	NA
WP_160124249.1\|1312972_1313377_+	hypothetical protein	NA	NA	NA	NA
WP_160124250.1\|1313462_1313882_+	hypothetical protein	NA	NA	NA	NA
WP_160124251.1\|1313899_1314955_+	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	3.6e-59	39.8
WP_087486619.1\|1316153_1317372_+\|transposase	IS3-like element ISAba19 family transposase	A0A0N7C1X7	Escherichia_phage	1.8e-78	51.5

DBSCAN-SWA_6

1640896 : 1685810

Enterobacteria_phage(18.18%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005080553.1\|1640896_1641310_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	9.0e-14	47.1
WP_125316749.1\|1641366_1641555_-	hypothetical protein	NA	NA	NA	NA
WP_004639237.1\|1641714_1641837_+\|protease	ATP-dependent Clp protease adaptor ClpS	NA	NA	NA	NA
WP_004639236.1\|1641933_1644219_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.5e-163	43.2
WP_005090434.1\|1644218_1644581_+	YnfA family protein	A0A218MNG8	uncultured_virus	1.5e-25	57.5
WP_005080559.1\|1644972_1646016_+	3-deoxy-7-phosphoheptulonate synthase	A0A1Z1LZD8	Serratia_phage	7.9e-83	45.7
WP_005090437.1\|1646074_1646995_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004639232.1\|1646994_1647555_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_004639231.1\|1647630_1649703_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_017396081.1\|1649775_1650192_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_125316750.1\|1650222_1650939_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_160124269.1\|1650960_1652049_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_005080572.1\|1652120_1652585_-	hypothetical protein	NA	NA	NA	NA
WP_004639226.1\|1652953_1654591_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.2e-151	51.8
WP_004639225.1\|1654621_1655479_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.1e-50	42.4
WP_004639224.1\|1655570_1656860_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.1e-137	60.5
WP_004639223.1\|1656989_1657355_+	cell division protein FtsB	NA	NA	NA	NA
WP_004639222.1\|1657344_1658052_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_005090442.1\|1658178_1658655_+	hypothetical protein	NA	NA	NA	NA
WP_004639220.1\|1658713_1659478_-	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_004639219.1\|1659474_1659846_-	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_005080585.1\|1660061_1660475_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_005090445.1\|1660476_1660890_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_005080588.1\|1660904_1661777_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_160124270.1\|1661945_1662557_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_100223926.1\|1662609_1663774_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_005080592.1\|1664060_1664321_+	hypothetical protein	NA	NA	NA	NA
WP_005090449.1\|1664447_1665032_+	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_171057921.1\|1665046_1666603_-	phospholipase D family protein	NA	NA	NA	NA
WP_035375121.1\|1666788_1667064_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_026056359.1\|1667084_1668194_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	8.9e-32	27.6
WP_005090465.1\|1668453_1670280_+	allophanate hydrolase	NA	NA	NA	NA
WP_160124271.1\|1670295_1673901_+	urea carboxylase	NA	NA	NA	NA
WP_004639207.1\|1673912_1674608_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_017396669.1\|1674919_1675852_+\|transposase	IS5-like element ISAha2 family transposase	Q1MVF0	Enterobacteria_phage	7.1e-59	41.6
WP_160124359.1\|1675886_1676189_+	hypothetical protein	NA	NA	NA	NA
WP_008942430.1\|1676379_1677255_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_008942429.1\|1677262_1678267_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_161412296.1\|1678367_1679252_+	protein deglycase HchA	NA	NA	NA	NA
WP_008942427.1\|1679399_1680401_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_005080626.1\|1680462_1681338_-	bile acid:sodium symporter family protein	NA	NA	NA	NA
WP_008942425.1\|1682019_1683087_+	HlyD family secretion protein	NA	NA	NA	NA
WP_004639199.1\|1683112_1684660_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_020846310.1\|1684877_1685810_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9

DBSCAN-SWA_7

2444746 : 2483202

uncultured_Mediterranean_phage(25.0%)

tRNA,transposase,integrase

attL 2439877:2439892|attR 2474076:2474091

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2439877:2439892	attL	NA	NA	NA	NA
WP_005091373.1\|2444746_2445478_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_005091376.1\|2445506_2446322_+	arginyltransferase	NA	NA	NA	NA
WP_005091378.1\|2446307_2446757_-	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA
WP_118903117.1\|2446861_2447746_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_005091382.1\|2447952_2448834_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_005081540.1\|2449035_2450226_-	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	6.2e-15	27.6
WP_004638187.1\|2450318_2452457_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.4e-49	24.7
WP_004638185.1\|2452634_2453105_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_004638184.1\|2453265_2453640_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_005091386.1\|2453811_2455149_-	EcsC family protein	NA	NA	NA	NA
WP_004638181.1\|2455439_2456669_+	3-oxoacyl-ACP synthase	NA	NA	NA	NA
WP_005091388.1\|2456701_2457154_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_017395860.1\|2457643_2458048_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_017395859.1\|2458139_2458478_+\|transposase	transposase	NA	NA	NA	NA
WP_005081532.1\|2458760_2458925_-	hypothetical protein	NA	NA	NA	NA
WP_100222603.1\|2459480_2460570_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005091392.1\|2460958_2462584_+	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	4.8e-95	36.7
WP_005091394.1\|2462576_2463608_+	hypothetical protein	NA	NA	NA	NA
WP_005081519.1\|2464544_2464808_-	YfhL family 4Fe-4S dicluster ferredoxin	A0A1B1IWY9	uncultured_Mediterranean_phage	3.1e-20	56.2
WP_004638166.1\|2464809_2465301_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	5.3e-29	44.9
WP_005091398.1\|2465617_2466865_+\|integrase	tyrosine-type recombinase/integrase	A0A0P0IRB7	Acinetobacter_phage	2.9e-124	56.9
WP_087554624.1\|2467944_2469104_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.7e-49	38.4
WP_005091401.1\|2469868_2470234_-	copper-binding protein	NA	NA	NA	NA
WP_005091405.1\|2473426_2474926_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
2474076:2474091	attR	NA	NA	NA	NA
WP_005091408.1\|2474925_2476230_-	TolC family protein	NA	NA	NA	NA
WP_100833373.1\|2476310_2476715_-	hypothetical protein	NA	NA	NA	NA
WP_005091414.1\|2476846_2478676_-	ferrous iron transporter B	NA	NA	NA	NA
WP_004699719.1\|2478665_2478923_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_005091417.1\|2478933_2480229_-	cation transporter	NA	NA	NA	NA
WP_004880426.1\|2480313_2480718_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_005091419.1\|2480767_2481649_-	copper resistance protein B	NA	NA	NA	NA
WP_104470630.1\|2481982_2483202_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	7.6e-77	51.2

DBSCAN-SWA_8

2496577 : 2538650

Ralstonia_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_100223926.1\|2496577_2497742_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-138	84.9
WP_005091440.1\|2498553_2498919_-	hypothetical protein	NA	NA	NA	NA
WP_005091441.1\|2498919_2500044_-	hypothetical protein	NA	NA	NA	NA
WP_005091442.1\|2500506_2501427_-	hypothetical protein	NA	NA	NA	NA
WP_125269079.1\|2502201_2503420_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.4e-78	52.9
WP_118901380.1\|2504246_2505405_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.5e-50	39.1
WP_118903119.1\|2505373_2507848_-	hypothetical protein	NA	NA	NA	NA
WP_005091447.1\|2508214_2509066_-	hypothetical protein	NA	NA	NA	NA
WP_005091449.1\|2509269_2509506_+	hypothetical protein	NA	NA	NA	NA
WP_005091450.1\|2509507_2509702_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_005091452.1\|2509828_2510302_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.5e-23	42.3
WP_005081517.1\|2510337_2510910_-	flavodoxin family protein	NA	NA	NA	NA
WP_005081516.1\|2510993_2511734_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_005091456.1\|2511814_2512864_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_004638161.1\|2512935_2513925_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_005091458.1\|2514112_2515990_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	7.9e-57	31.3
WP_017395860.1\|2516697_2517102_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_017395859.1\|2517193_2517532_+\|transposase	transposase	NA	NA	NA	NA
WP_160124291.1\|2517557_2517716_-	hypothetical protein	NA	NA	NA	NA
WP_004638159.1\|2518086_2519370_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_008942493.1\|2519530_2521168_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_005081509.1\|2521172_2521754_+	outer membrane lipoprotein LolB	NA	NA	NA	NA
WP_005081506.1\|2521767_2522601_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_004638154.1\|2523190_2524144_+	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	2.1e-42	34.9
WP_005081504.1\|2524240_2524537_+	50S ribosomal protein L25	NA	NA	NA	NA
WP_005081501.1\|2524556_2525138_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_004638150.1\|2525283_2525664_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_005091465.1\|2525843_2527634_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_020846296.1\|2527630_2528818_-	hypothetical protein	NA	NA	NA	NA
WP_005091467.1\|2528823_2529063_-	hypothetical protein	NA	NA	NA	NA
WP_005081497.1\|2529494_2530154_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	M4QPK3	Synechococcus_phage	9.9e-39	41.7
WP_005081494.1\|2530197_2530872_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_005081491.1\|2530965_2531733_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_005091469.1\|2531962_2534011_+	TonB-dependent receptor	NA	NA	NA	NA
WP_005081486.1\|2534085_2534559_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA
WP_004638139.1\|2534774_2535017_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	4.3e-08	44.1
WP_004655272.1\|2535205_2535442_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.4e-11	43.2
WP_004638137.1\|2535528_2536263_-	3-oxoacyl-ACP reductase FabG	Q06VL0	Trichoplusia_ni_ascovirus	5.9e-16	31.1
WP_118903147.1\|2536259_2537246_-	ACP S-malonyltransferase	NA	NA	NA	NA
WP_008942576.1\|2537492_2538650_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_9

2750414 : 2813075

uncultured_Caudovirales_phage(31.25%)

tRNA,transposase,integrase

attL 2768569:2768589|attR 2804205:2804225

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005092317.1\|2750414_2751134_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.0e-89	70.6
WP_005092315.1\|2751126_2752167_-	ACR3 family arsenite efflux transporter	NA	NA	NA	NA
WP_005092314.1\|2752178_2752652_-	arsenate reductase ArsC	A0A2H4J8A6	uncultured_Caudovirales_phage	3.6e-35	49.4
WP_004637919.1\|2752658_2752979_-	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	1.3e-23	65.1
WP_005092312.1\|2753036_2753471_-	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	3.3e-43	65.0
WP_008942181.1\|2753746_2754340_-	LysE family transporter	NA	NA	NA	NA
WP_008942182.1\|2755121_2756135_-	Fic family protein	D7RWK9	Brochothrix_phage	2.4e-07	25.4
WP_008942183.1\|2756300_2759402_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	3.1e-74	30.6
WP_005274609.1\|2760716_2761646_-\|transposase	IS5-like element ISAba10 family transposase	Q1MVF0	Enterobacteria_phage	8.4e-52	38.3
WP_008942186.1\|2762827_2764222_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_008942187.1\|2764218_2765652_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_008942188.1\|2765641_2767372_-	type I restriction-modification system subunit M	NA	NA	NA	NA
WP_160124293.1\|2767700_2768681_-	hydrolase or metal-binding protein	NA	NA	NA	NA
2768569:2768589	attL	NA	NA	NA	NA
WP_008942190.1\|2770092_2771133_-	YqaJ viral recombinase family protein	S6C475	Thermus_phage	2.8e-43	36.8
WP_008942191.1\|2771301_2772345_-	DUF932 domain-containing protein	A0A0H4INH5	Stenotrophomonas_phage	8.6e-61	39.5
WP_008942192.1\|2772402_2772690_-	hypothetical protein	NA	NA	NA	NA
WP_065286431.1\|2772903_2774991_+	AAA family ATPase	NA	NA	NA	NA
WP_017396499.1\|2775545_2775800_+	hypothetical protein	NA	NA	NA	NA
WP_008942226.1\|2775931_2776156_+	hypothetical protein	NA	NA	NA	NA
WP_008942225.1\|2776171_2776831_+	hypothetical protein	NA	NA	NA	NA
WP_008942222.1\|2780819_2782457_-	hypothetical protein	NA	NA	NA	NA
WP_065286433.1\|2782621_2783548_+	hypothetical protein	NA	NA	NA	NA
WP_008942217.1\|2783550_2784447_-	hypothetical protein	NA	NA	NA	NA
WP_008942216.1\|2784584_2784860_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_008942215.1\|2784843_2785995_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8L8	uncultured_Caudovirales_phage	1.7e-89	44.2
WP_017396681.1\|2786130_2787150_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_004637913.1\|2787407_2787863_+	CHAP domain-containing protein	D5GVH7	Campylobacter_virus	1.3e-13	43.2
WP_005092264.1\|2787885_2788677_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	S4VW33	Pandoravirus	3.5e-14	28.5
WP_005092262.1\|2788739_2789933_-	MFS transporter	NA	NA	NA	NA
WP_005092261.1\|2790038_2792795_-	aconitate hydratase AcnA	NA	NA	NA	NA
WP_008942213.1\|2792920_2793736_-	TatD family hydrolase	NA	NA	NA	NA
WP_008942212.1\|2793797_2794694_-	DUF3298 domain-containing protein	NA	NA	NA	NA
WP_008942211.1\|2794800_2795619_-	hypothetical protein	NA	NA	NA	NA
WP_004637906.1\|2795692_2797285_-	peptide chain release factor 3	A0A2K9L2P9	Tupanvirus	1.5e-11	32.9
WP_017396682.1\|2797561_2798434_-	hypothetical protein	NA	NA	NA	NA
WP_008942209.1\|2798722_2800327_-	YadA-like family protein	NA	NA	NA	NA
WP_004637903.1\|2800383_2801889_-	YadA-like family protein	NA	NA	NA	NA
WP_160124045.1\|2802194_2802323_+	hypothetical protein	NA	NA	NA	NA
WP_008942208.1\|2802328_2802679_+\|transposase	transposase	NA	NA	NA	NA
WP_004637901.1\|2802683_2803508_-	hypothetical protein	NA	NA	NA	NA
WP_001223318.1\|2803980_2804682_+\|transposase	IS1-like element ISPa14 family transposase	A0A218MNG1	uncultured_virus	9.9e-37	55.0
2804205:2804225	attR	NA	NA	NA	NA
WP_020846310.1\|2804782_2805715_+\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	1.8e-57	40.9
WP_008942207.1\|2806171_2806567_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_008942206.1\|2806726_2808238_+	hypothetical protein	NA	NA	NA	NA
WP_008942205.1\|2808532_2809240_+	hypothetical protein	NA	NA	NA	NA
WP_008942204.1\|2809469_2810615_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_005089444.1\|2812142_2813075_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	7.4e-56	40.3

DBSCAN-SWA_10

3109852 : 3169666

Escherichia_phage(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_085947913.1\|3109852_3110943_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_160124297.1\|3111189_3111702_+	hypothetical protein	NA	NA	NA	NA
WP_005087925.1\|3111949_3113845_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_004637613.1\|3113920_3114532_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_017395049.1\|3114554_3115370_+	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_005083939.1\|3115573_3116107_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA
WP_004637609.1\|3116109_3117042_+\|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	NA	NA	NA	NA
WP_017395048.1\|3117104_3118298_-	putative lipid II flippase FtsW	NA	NA	NA	NA
WP_005087920.1\|3118308_3119667_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_017395047.1\|3119838_3120090_-	hypothetical protein	NA	NA	NA	NA
WP_160124298.1\|3120102_3121956_-	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_017394530.1\|3121952_3122213_-	ferrous iron transport protein A	NA	NA	NA	NA
WP_035374893.1\|3122363_3123284_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.8e-33	31.4
WP_026056261.1\|3123416_3124232_+	DsbC family protein	NA	NA	NA	NA
WP_005087913.1\|3124671_3125973_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_004637599.1\|3126031_3127171_+	threonine synthase	NA	NA	NA	NA
WP_005087912.1\|3127230_3128295_-	D-alanyl-D-alanine endopeptidase PBP7/8	NA	NA	NA	NA
WP_005083960.1\|3128505_3129141_+	response regulator	NA	NA	NA	NA
WP_160124299.1\|3129159_3130725_+	histidine kinase	A0A1V0SGX0	Hokovirus	8.2e-07	23.6
WP_005087908.1\|3130747_3132175_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_005087906.1\|3132226_3133393_-	hypothetical protein	A0A0R6PIZ1	Moraxella_phage	1.7e-12	30.0
WP_005087904.1\|3133402_3134947_-	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_004637591.1\|3135071_3136142_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_004637590.1\|3136141_3137242_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_026056263.1\|3137397_3138846_+	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	4.5e-52	37.0
WP_005087898.1\|3138849_3139257_+	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_005087896.1\|3139292_3139919_+	hypothetical protein	NA	NA	NA	NA
WP_005083982.1\|3139965_3140625_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-34	39.1
WP_005087895.1\|3140787_3141627_-	aquaporin	NA	NA	NA	NA
WP_004637583.1\|3142025_3143318_-	DNA adenine methylase	A0A0P0BWH0	Ostreococcus_mediterraneus_virus	1.6e-37	32.8
WP_005087893.1\|3143314_3144415_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	6.7e-48	37.1
WP_004637581.1\|3144427_3144892_-	transcriptional repressor NrdR	NA	NA	NA	NA
WP_005087891.1\|3145027_3146419_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	1.3e-35	33.0
WP_000780326.1\|3146487_3146826_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_004637578.1\|3147098_3147326_+	accessory factor UbiK family protein	NA	NA	NA	NA
WP_160124300.1\|3147395_3148250_+	ATP-binding protein	NA	NA	NA	NA
WP_171294499.1\|3148409_3148859_-	hypothetical protein	NA	NA	NA	NA
WP_001223318.1\|3149207_3149909_-\|transposase	IS1-like element ISPa14 family transposase	A0A218MNG1	uncultured_virus	9.9e-37	55.0
WP_000693745.1\|3149984_3151940_+	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	2.1e-129	41.1
WP_014538385.1\|3152297_3153266_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	2.4e-25	31.0
WP_125269079.1\|3153341_3154561_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.4e-78	52.9
WP_046128207.1\|3154672_3155320_-	hypothetical protein	NA	NA	NA	NA
WP_046128206.1\|3155748_3156831_+	ImmA/IrrE family metallo-endopeptidase	A0A0U4JD08	Gordonia_phage	2.0e-36	36.0
WP_001141890.1\|3157036_3157216_+	hypothetical protein	NA	NA	NA	NA
WP_046128205.1\|3157329_3158343_+	nucleotidyltransferase	NA	NA	NA	NA
WP_046128204.1\|3158342_3160055_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_005314752.1\|3160060_3160522_+	Mov34/MPN/PAD-1 family protein	NA	NA	NA	NA
WP_023187982.1\|3160524_3161919_+	SAVED domain-containing protein	NA	NA	NA	NA
WP_057066693.1\|3161963_3163856_+	hypothetical protein	NA	NA	NA	NA
WP_104470630.1\|3163903_3165123_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	7.6e-77	51.2
WP_171503503.1\|3165352_3166264_-	cation transporter	NA	NA	NA	NA
WP_008942233.1\|3166460_3167030_-	ester cyclase	NA	NA	NA	NA
WP_008942232.1\|3167010_3167394_-	hypothetical protein	NA	NA	NA	NA
WP_125269079.1\|3168447_3169666_+\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	2.4e-78	52.9

DBSCAN-SWA_11

3303500 : 3374805

Staphylococcus_phage(18.18%)

transposase,integrase

attL 3302291:3302336|attR 3358842:3358887

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3302291:3302336	attL	NA	NA	NA	NA
WP_039047371.1\|3303500_3304682_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	7.2e-40	30.6
WP_004858371.1\|3304674_3304923_+	hypothetical protein	NA	NA	NA	NA
WP_039047370.1\|3304991_3305534_+	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_039047369.1\|3305544_3306291_+	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	1.0e-44	37.5
WP_079270859.1\|3307226_3307622_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_039047368.1\|3307781_3309860_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_004907087.1\|3309972_3311241_-	MgtC/SapB family protein	NA	NA	NA	NA
WP_004985732.1\|3311290_3312883_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_004985737.1\|3313023_3314148_-	ABC transporter permease	NA	NA	NA	NA
WP_004985739.1\|3314149_3316906_-	ribosome-associated ATPase/putative transporter RbbA	A0A2H4PQG7	Staphylococcus_phage	3.4e-24	30.2
WP_004907097.1\|3316902_3317961_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004985741.1\|3317979_3319377_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_100834158.1\|3319381_3320077_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_125316847.1\|3320612_3322031_+	phosphate--AMP phosphotransferase	NA	NA	NA	NA
WP_100834159.1\|3322584_3323256_+	hypothetical protein	NA	NA	NA	NA
WP_000004527.1\|3323255_3325583_+	hypothetical protein	NA	NA	NA	NA
WP_000557620.1\|3328871_3329234_+	hypothetical protein	NA	NA	NA	NA
WP_001060549.1\|3329357_3331718_+	DEAD/DEAH box helicase family protein	W8W2E1	Invertebrate_iridovirus	1.3e-32	29.2
WP_001005874.1\|3332004_3332313_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016164863.1\|3332309_3333599_+	HipA domain-containing protein	NA	NA	NA	NA
WP_005064486.1\|3335031_3335964_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	5.0e-60	41.9
WP_000734101.1\|3336076_3336397_-	hypothetical protein	NA	NA	NA	NA
WP_000733361.1\|3336520_3336904_-	hypothetical protein	NA	NA	NA	NA
WP_160124306.1\|3336928_3337066_-	hypothetical protein	NA	NA	NA	NA
WP_001040037.1\|3337106_3338039_-\|transposase	IS5-like element ISAha2 family transposase	Q1MVF0	Enterobacteria_phage	1.9e-59	41.6
WP_017396282.1\|3338622_3339885_-	chromosome partitioning protein ParB	NA	NA	NA	NA
WP_004985675.1\|3340049_3340691_-	glutathione S-transferase	NA	NA	NA	NA
WP_004985679.1\|3340791_3341190_-	OsmC family protein	NA	NA	NA	NA
WP_004985681.1\|3341186_3342134_-	pirin family protein	NA	NA	NA	NA
WP_004985683.1\|3342439_3342742_-	DUF3861 domain-containing protein	NA	NA	NA	NA
WP_004985684.1\|3342768_3343158_-	transcriptional repressor	NA	NA	NA	NA
WP_004985686.1\|3343172_3343697_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_104470630.1\|3345610_3346830_-\|transposase	IS3 family transposase	A0A0N7C1X7	Escherichia_phage	7.6e-77	51.2
WP_125316848.1\|3347536_3349708_+	AAA family ATPase	A0A2H4J1E0	uncultured_Caudovirales_phage	1.5e-104	67.4
WP_032012138.1\|3349780_3350053_-	hypothetical protein	A0A2H4IYJ6	uncultured_Caudovirales_phage	1.2e-19	59.1
WP_004907175.1\|3351444_3351747_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_118902202.1\|3351751_3353011_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_160124307.1\|3353741_3357089_-	SWIM zinc finger family protein	Q2NP48	Hyphantria_cunea_nuclear_polyhedrosis_virus	4.0e-51	30.7
WP_000557943.1\|3357504_3357768_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA
WP_043975117.1\|3357754_3358018_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA
WP_160124308.1\|3358945_3360298_-	MFS transporter	NA	NA	NA	NA
3358842:3358887	attR	NA	NA	NA	NA
WP_160124309.1\|3360416_3361442_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_160124310.1\|3361454_3362228_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_004956740.1\|3362249_3363377_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_005092614.1\|3363388_3365038_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	8.4e-79	39.1
WP_005092616.1\|3365126_3366011_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
WP_005085784.1\|3366024_3367542_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_004637436.1\|3367708_3368590_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_171057913.1\|3368662_3370087_-	amino acid permease	NA	NA	NA	NA
WP_171057912.1\|3370287_3370605_-	RidA family protein	NA	NA	NA	NA
WP_005085790.1\|3371783_3373040_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_004637431.1\|3373177_3373645_+	Lrp/AsnC ligand binding domain-containing protein	NA	NA	NA	NA
WP_080591915.1\|3373776_3374805_-\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP032002.1|WP_160124359.1|1675886_1676189_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP032002.1|WP_032012138.1|3349780_3350053_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP032002.1|WP_160124359.1|1675886_1676189_+|hypothetical-protein

1675886_1676189_+

100 aa aa

HTH_ARAC

Identity	Hit_domain_coverage
0.40963855421686746	0.9880952380952381

1640896-1685810

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP032002_3	Orphan	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	1675850-1675884	0

1. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP032002 position: 1675850-1675884, mismatch: 0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

NZ_CP032002.1|WP_032012138.1|3349780_3350053_-|hypothetical-protein

3349780_3350053_-

90 aa aa

HTH_XRE,HTH_21

Identity	Hit_domain_coverage
0.4117647058823529	0.8793103448275862

3303500-3374805

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP032002_3	Orphan	3.1\|940682\|35\|NZ_CP032002\|CRISPRCasFinder	940682-940716	35	3337109-3337075	0

1. spacer 3.1|940682|35|NZ_CP032002|CRISPRCasFinder matches to NZ_CP032002 position: 3337109-3337075, mismatch: 0

tgaattctgttcaaatgagcagagtgttatctttt	CRISPR spacer
tgaattctgttcaaatgagcagagtgttatctttt	Protospacer
***********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP032003

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP032002

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information