CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP019288	Kordia antarctica strain IMCC3317 chromosome, complete genome	18 crisprs	DEDDh,cas3,cas3HD,WYL,cas2,cas1,cas9,RT,csa3,csx1	0	25	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP019288_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_1

219448-219522

Unclear

Consensus_repeat	Method
AAGCCGTTTCTAAAAGCGAAGCG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP019288_1

>merge|NZ_CP019288|1|219448-219522|CRISPRCasFinder
AAGCCGTTTCTAAAAGCGAAGCGTGTCTAAGAGCAAAGCGATACCAAAGGCAAAGCCGTATCTAAAAGCGAAGCG

>NZ_CP019288|1|1|219448-219522|CRISPRCasFinder
AAGCCGTTTCTAAAAGCGAAGCG	TGTCTAAGAGCAAAGCGATACCAAAGGCA
AAGCCGTATCTAAAAGCGAAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160127650.1\|217774_219310_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|274229
NZ_CP019288.1\|WP_160127649.1\|216516_217623_+\|DUF2911-domain-containing-protein	unknown	unknown	gnl\|CDD\|378565
NZ_CP019288.1\|WP_160127642.1\|206077_206803_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|225818
NZ_CP019288.1\|WP_160127651.1\|219547_219919_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP019288.1\|WP_160127652.1\|220380_222486_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP019288.1\|WP_160127655.1\|225282_225918_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127645.1\|208717_211132_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP019288.1\|WP_160127641.1\|203371_205804_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP019288.1\|WP_160127658.1\|228392_229760_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143418
NZ_CP019288.1\|WP_160127647.1\|211787_213008_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP019288.1\|WP_160127656.1\|226052_226403_-\|ribose-5-phosphate-isomerase	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127646.1\|211288_211660_-\|DUF2200-family-protein	unknown	unknown	gnl\|CDD\|337575
NZ_CP019288.1\|WP_160127643.1\|206799_207855_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019288.1\|WP_160127644.1\|207855_208569_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127648.1\|213164_215522_+\|endonuclease	unknown	unknown	gnl\|CDD\|367881
NZ_CP019288.1\|WP_160127654.1\|224223_225261_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP019288.1\|WP_160127660.1\|231800_232184_-\|DUF3037-domain-containing-protein	unknown	unknown	gnl\|CDD\|378608
NZ_CP019288.1\|WP_160127659.1\|229943_231458_-\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349927
NZ_CP019288.1\|WP_160127657.1\|226730_228389_+\|acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236239
NZ_CP019288.1\|WP_160127653.1\|223011_223866_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160127650.1\|217774_219310_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|274229	TIGR02608, hypothetical_protein, delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.	1.28074e-10
NZ_CP019288.1\|WP_160127649.1\|216516_217623_+\|DUF2911-domain-containing-protein	gnl\|CDD\|378565	pfam11138, DUF2911, Protein of unknown function (DUF2911). This bacterial family of proteins has no known function.	1.21017e-61
NZ_CP019288.1\|WP_160127642.1\|206077_206803_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	7.55936e-51
NZ_CP019288.1\|WP_160127652.1\|220380_222486_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP019288.1\|WP_160127659.1\|229943_231458_-\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349927	cd05678, M20_dipept_like, uncharacterized M20 dipeptidase. Peptidase M20 family, unknown dipeptidase-like subfamily (inferred by homology to be dipeptidases). M20 dipeptidases include a large variety of bacterial enzymes including cytosolic nonspecific dipeptidase (CNDP), Xaa-methyl-His dipeptidase (anserinase),and canosinase. These dipeptidases have been shown to act on a wide range of dipeptides, but not larger peptides. For example, anserinase mainly catalyzes the hydrolysis of N-alpha-acetylhistidine while carnosinase degrades beta-alanyl-L-histidine.	0
NZ_CP019288.1\|WP_160127645.1\|208717_211132_+\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	7.61613e-92
NZ_CP019288.1\|WP_160127641.1\|203371_205804_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_CP019288.1\|WP_160127658.1\|228392_229760_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143418	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.	0
NZ_CP019288.1\|WP_160127647.1\|211787_213008_+\|redoxin-domain-containing-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	3.44911e-19
NZ_CP019288.1\|WP_160127646.1\|211288_211660_-\|DUF2200-family-protein	gnl\|CDD\|337575	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200). This domain, found in various hypothetical bacterial proteins, has no known function.	7.69033e-72
NZ_CP019288.1\|WP_160127643.1\|206799_207855_-\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	1.59662e-53
NZ_CP019288.1\|WP_160127651.1\|219547_219919_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	4.80414e-06
NZ_CP019288.1\|WP_160127648.1\|213164_215522_+\|endonuclease	gnl\|CDD\|367881	pfam04231, Endonuclease_1, Endonuclease I. Bacterial periplasmic or secreted endonuclease I (EC:3.1.21.1) E. coli endonuclease I (EndoI) is a sequence independent endonuclease located in the periplasm. It is inhibited by different RNA species. It is thought to normally generate double strand breaks in DNA, except in the presence of high salt concentrations and RNA, when it generates single strand breaks in DNA. Its biological role is unknown. Other family members are known to be extracellular. This family also includes a non-specific, Mg2+ activated ribonuclease precursor.	3.67688e-40
NZ_CP019288.1\|WP_160127654.1\|224223_225261_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.61545e-47
NZ_CP019288.1\|WP_160127660.1\|231800_232184_-\|DUF3037-domain-containing-protein	gnl\|CDD\|378608	pfam11236, DUF3037, Protein of unknown function (DUF3037). This bacterial family of proteins has no known function.	1.75365e-55
NZ_CP019288.1\|WP_160127657.1\|226730_228389_+\|acetolactate-synthase-large-subunit	gnl\|CDD\|236239	PRK08322, PRK08322, acetolactate synthase large subunit.	0
NZ_CP019288.1\|WP_160127653.1\|223011_223866_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.35946e-09

>NZ_CP019288.1|WP_160127650.1|217774_219310_+|T9SS-type-A-sorting-domain-containing-protein
MKKIACIFLLFFIAKLSSQNISLDTTFGTDGFQDSLSNGNFLNSAILLPDGKILISGTLNASTEFFIAKYNVDGSPDTSFGTNGFIITNSISNQKETIYGMDVQSDGKIIVVGQSDINPSLSGFYYHALLARFNADGSTDTTFGTNGYVKTELGSDDDYLSDIQITATGDIYVVGYSKETATGYSTAKIAKYDALGNLDTAFATNGIQTVSLAKGVNLNEISVQNDGTLFLSGSSIDLNDNKDTLLVKLDVTGNFDASFGTNGMQLTDIGYTNEYITDFVLHNNKILATGTVSGTSFLPHTILMRFNLDGTLDTTFSIDGFHIETPDASNYSTSFGKKISVLPDGTILASGHAIGNNNYDLFLIAFNDDGTRVTNFGTNGQYLHQVSARQDYSSDLLIQPDGKIIVTGAYSSTSTNKRNMLIRFKDAYVLSNAEFELEDTVVMYPNPTANTLHIKTNTSIEKIIIHTLSGQLVKEIISSENTVAIDFLASGTYIIKVISSQGTIVSKFIKL
>NZ_CP019288.1|WP_160127649.1|216516_217623_+|DUF2911-domain-containing-protein
MKSKITHVASVAVFMCFLFTSTAFAQINTPRGSQKATVSQTVGITNISVTYSRPSVRGREIWGKLVPYGMNNFGFGTAKESPWRAGADENTVITFSNDVKIEGKPIKAGTYGLHMEVKENGSVTLIFSNNSTSWGSYFYEPSEDALRVEVQSKEIPTKELLTFDFIEVKPNSTTLALQWEKKEIPFAIEVDVTTIVLANIRKTMQDQLGFNRQTWEDAAAFSLNNGGDLDEALAWINNAIAGQFYSQQTFANTQIKAAILMKQGKNDEALAAIDQALPLATVIEIHQYGRQLLAQKMNDRAMEIFTYNAKKHKGTWPVHYGMARAYSAKGDFKPAIKHLKKALENAPNAASKSRVQANLDKLKKGEAI
>NZ_CP019288.1|WP_160127648.1|213164_215522_+|endonuclease
MKQLLLWLFLAVSITAYAQVPSYYNDVNLSQSGTDLKDDLATKIISTHTTYLSYTPGVWNALEQSDVDPNNNSDVILIYGHNDTDGNFKTDRTRDKYQHGGSVGDWNREHVFAKSLADPALGTSGAGADAHNLRPCDMQQNSSRNNRKFGTGSGVAYIVPSGDWYPGDEWKGDTARMIMFMYLRYGNRCLPTFVGTGSSVSSDNNMIDLFLQWNVDDPVSAFETQRNGVIANIQGNRNPFVDNPAFATQIWGGPQAEDKFGNGGSDTQAPTVPQSLVASNTTTSATTLNWAFSTDNTAVTSYEIFQNSVFIGNTANTTYNVSGLSENTSYTFTVTAKDAAGNTSSASSGVTITTTTGGGNPGGSTDDLFFSEYIEGSSNNKALEIANFTGSSVNLSIYTIKKQTNGAGSWSSAYALSGNLNDGNVYVIANSSANSTIQNQADVTTGGAVATFNGNDPVGLFKNNVLIDIIGTFNGGSSNFAQNVTLVRKSSVTSPNTNYAVAEWDSFATDTFSNLGTHSVDGGSSGTAGSTTVLHEGFFESGLDGWVDGGSDCYRYSGSNSYEGNYSIRLRDNSGTKSSMTLNDVDVSPYDEVEVEFYFYSYSMETGEDFWLRYYNGSSWQTVRTYVSGTDFQNNNFFSSKVTLSKSSYNFVSDAKFRFQADASANADQIYIDQVTITGIVNASARMNSEPTKSDIIVHSAFSEEDGLFVDEDFTVYPNPVRSQLQVKIFADATAEYQIHSLLGQVVKVGTLTNKTINVANLKAGIYILQINDGDEILTKKFIKQ
>NZ_CP019288.1|WP_160127647.1|211787_213008_+|redoxin-domain-containing-protein
MQKIYILFLGILLVSCGKKETKTATFSLKDGSWHVALTVQDEKELPFIFTTTAKGIEIHNAEERISVDDITIKEDSITIKMDVYEGVLKGKFTDSNTIKGEFVKVSLDRTVPFTATFGETNRFPKLKTDAKANIAGNWETVFSPNSEDDCYVAKGIFKQNGNIVIGTFRTTTGDYRYLEGTLNGDQLQLSVFDGAHAFLFTATVTDDSMNGEFQSGNHWKEPFMAKRNETYELPDAKSLTYIKEGYDEFNFSFPDANNNMISLSDVTLQGKVRIVQIMGTWCPNCLDESKYYSNYAKNNPDIKFIALAFEYTKTKEKAVANMERLQKRLNIPYPILLAQFGTSDKKKAQEKLPMLNHVLSYPTTIFIDKQGKVRRIHTGFNGPATGDKYVAFKKDFENFVSELQNE
>NZ_CP019288.1|WP_160127646.1|211288_211660_-|DUF2200-family-protein
MKVTEAHINRIATMKFASVYPHYVTKVEKKGRTIAELHEVINWLTGFNDSKIKELIESTITFETFFEEATLHSNAHLIKGVICGYRIEEIDNELTRNVRYLDKLVDELAKGRKMEKILRKEKS
>NZ_CP019288.1|WP_160127645.1|208717_211132_+|TonB-dependent-receptor
MKIKYTFLAFMLFLSFTNAVQSQTQEKISIQGNIVSETKESLPFVNILLNSPEGTLIKATITDIDGNFMIKDLQPKKYLLKISFVGYETLTKEITLTSGRNELGAIQLKISSESLEAVTIIAERPIIQVEPDKTIFNVANTISSAGNNGLEILRKAPGVRLDNNNNVIVEGKSGVLIYIDGRQNYLQGDDLTAFLQSLQADTIDSIEIITQPSSKYDAAGNAGIINIKLIREKGLGTRGSISSTLTIGDFARTNNSVSVNSRFKKWNVFGTYSNYLGRSTGFIDLYRTQGNKIFDAQNDSEFDGFSNNFRTGADYYLSKKSTLGTVITLNLRDSESRSNNRTPIIDRNTGITDSILRSPNSSNNNSTNLNANLNYRYQDTLGTSFNADLDYGRYSRERFNNQPNFYTTPNGEVLNAIITNQETPIDINIYAAKVDYGQKIGSGTFETGFKVSQVITDNIFNFFDVINGNNILNTARSNQFKYDEKIYAVYSKYNFGFNNWKFQAGLRVERTNSQGNLTAEDTSKNQVVSRKYTDFFPSAGVSYQAGANNSLGLGYSRRIQRPDYQILNPFEYQLDELSFSRGNPFLQPQYTDNFKLSHTYKYTLTTSISYSYVSDFFAQVTEAVGDNRNFLSTRNVADQEVYNLSISYPFKVSDWWRVYANVYGSYNKYTATNAAFISTAQETFGFYAQNTFTLPKDIKLEVSGWYSSPSIWGGTYETKSLGSLNLAVQKSWKNWTGKIAINDVLYTSPWQGTTQFGNLRIDGRGGSDSRNVNFYIRYSFGNSEVKEAKKRDGSLEDEKGRIGG
>NZ_CP019288.1|WP_160127644.1|207855_208569_-|hypothetical-protein
MIVVLNETIKEIIMKKTYVSSILLFFILCTCVAETNEYSYLKIILNNQETISYPPGTSFIAQDVQGNTVLSPDDLEQLKIYNIVQPITLFVFVSWNDEPDVHELKSGKLVLGKTNRSYKKSSPKKDKTPPKDHFSRPTDGDYARSIKNEKSNKKKNHKVYITKERYFSYDEKTGYNASLEFSNGVVFYYRDGKATAWQDGNVLDIKGKYLVKTADGLFKISYRPKTKEMWWVFEKDK
>NZ_CP019288.1|WP_160127643.1|206799_207855_-|histidine-kinase
MNRRIFGVKIFEIVALISTYIVLSIGYHVTLWFNRTSDYRLYSDLLNIESWFNNEGLQYVIMFVATSVVWIVIFKIFRHWKLWQRLLLHFLGLPFFIFCSWKVFYLICESIGYWHMNGPGQVWDIYIPTLIYLIQFSLIHAYEYYIINQRKIQNEVELTNAALKSELSAIKAQLNPHFLYNVFNTINASVPKEMEETREMIAELSDLFRYQLKASREDFVTLEEELDFVKKYLKLEQRRFEDRLKINIDVSDDLLTRKIPPMILQPLVENSVKHGISPLVEGGIIDIIIKEKEDTLIFEINDTGVGIANKEHIFELGVGLGNTQKRLQKMYNSTLTFSDNVPTGLKVYFEL
>NZ_CP019288.1|WP_160127642.1|206077_206803_-|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein
MKKVVIVDDEKSGRTLIKEYLEYHKELILVGEANNGVDAIKIINEFKPDLVFMDIQMPGLTGFDVLEHLNEIPTIIFSTAYDKYALKAFEVHAVDYLLKPYTKERFDKAISKLKDNSPSQIAPLANEHILSKPTFPDRIIVEKGTKYVTLATADISYIEAYGSYSKIYDAKEGYLSNRGISQLEEKLNPEQFMRIHRSIIVNLPSIKEVSKYGKSYILVLKNDQKLKVSRSYANKVKELIL
>NZ_CP019288.1|WP_160127641.1|203371_205804_-|phenylalanine--tRNA-ligase-subunit-beta
MKISYNWVKQFIQLDWNAEKTGELLTDLGLEVEGIEKYESVKGGLEGIVVGHVLTCVQHPNADRLKITTVDLGSGEPVQIVCGAPNVAAGQKVPVATVGTTLYDAEGNGFKIKKGKIRGEESLGMICAEDELGLGESHDGILVLDDELVPGTLASEVFSIENDTVFEIGLTPNRADAMSHHGVARDLKAGLSQQDIKLEFITPSTSSFRVDNRTLKMDVEVEDKTLAPRYCGVTISGIQVKTSPEWLQHRLKAIGLTPKNNVVDVTNYVLHELGQPLHAFDANYISGNKIVVKTLEAGTKFITLDEVERELHEDDLMICDAEKPLCIAGVFGGLKSGVTEETTNIFLESAYFNPISVRKTAKRHGLNTDASFRFERGIDPNITEYALKRAALLIQELAGGEITSDLTDSYPVKIEDFQVRVSFENVAKLIGEELPKETIKNILSSLEIKINSVTDGGLGLTIPAYRVDVQREADVIEEILRVYGYNNIKFDEKWHTSISDTSRYEDYKLQDVVGAQLVSQGFYEIMTNSLTTASYVELSEQLKAEHNVTMLNPLSNDLSVMRQSLLFSGLEAISHNINRRQSDLKFFEFGKTYHAYSEENREEDKHLSVLITGNTTAETWRPNNAVSSDFFYAKGIVTAILERLGLNSLKVSPIKNDLFTEGLMLSLGKTKLVEFGIVKRKVLKSFDIKQEVIYADFNWDNVIEVAKNRKIKFKEIPKFPKVRRDFALLIDEATTFAEIDTIAKQSERNLLKEVSLFDVYQGDNLPKGKKSYAVSFTLQDEHKTLTDKQIDKIMNKLQQSFEKQLGAELR
>NZ_CP019288.1|WP_160127651.1|219547_219919_-|VOC-family-protein
MKLGAFSVSLAVKDIHVSKAFYENLGFTVFHGEIDQNWLIMKNGETIIGLFQGMFEGNLLTFNPGWNQDAQPLESFTDVRDIQKKLKGENVAFSTEADETTKGPASFSITDPDGNVILIDQHV
>NZ_CP019288.1|WP_160127652.1|220380_222486_-|ATP-dependent-DNA-helicase-RecG
MNQNVLQTPIDYLKGVGPNRADLLRKELGIHTYQDFINLFPNRYIDKTRYFKIAELQRNSSEVQVVGKITHIKMVQQQRGKRLVATFTDGTGEMELIWFRGHKWIKDSIKLNTPYVIFGKTNWYNGLFSLPHPEMELLQEHEQSLRTAMQPVYPSTEKLSNKGITNRVVNKLMQQLFTESRTQFYETLPPSILEELKLISKSEALFNIHFPKSQELLAKAQYRLKFEELFYIQIQLITKNLIHKSKIKGFPFDQVGEKFNDFYANHLPFDLTNAQKRVIKEIRNDLGSNAQMNRLLQGDVGSGKTIVALMSMLLAIDNDFQACIMAPTEILSTQHYNGIMELVEPLGLQVKLLTGSVKKKDRRIIHEMLEDGSLHILIGTHAVLEDKVKFKNLGLAIIDEQHRFGVEQRSKLWHKNTFPPHILVMTATPIPRTLAMSLYGDLDISVIDELPPGRKAIKTVHRYDSNRLKVFKFIRDEIKKGRQIYIVYPLIQESEQLDYKDLMDGYESISREFPMPEYQISIVHGKMKPADKDFEMNRFIKGETQIMVATTVIEVGVNVPNASVMIVESAERFGLSQLHQLRGRVGRGAEQSFCILMTSHKLSADGKTRLETMVRTSDGFEIAEVDLKLRGPGNIMGTQQSGVLNLKIADIVKDNDILKTARYYAMQILKADPSLRLEAHKAVRYTFAQLVKHKNIWNYIS
>NZ_CP019288.1|WP_160127653.1|223011_223866_-|CPBP-family-intramembrane-metalloprotease
MSKSVSEIKEAWNTIILFLILLTALSLVAYYVILKLNPTSIYVGALMISPALAAFITLKIKKRPIASLPWSLKELSYLKRSYFTPILYVSIAYLLIWLLGFGQFINTEQLIEWSNELGIESSNKALVIIVMVFLLLTVGVIKNLGSTLGEEIGWRGFLIFELRKVMPFKALAIVSGLIWAIWHYPIINLMYGRSENLILHMSAFTIMIIGISVILAYYTFKSNSLWPAAVYHSIHNIYIQKICTPLTISNDKTIFWIDEYGFMIPIVTTLFAIYFWRKAEKENL
>NZ_CP019288.1|WP_160127654.1|224223_225261_-|serine-hydrolase
MKKKLTKRILKILFISASIASLWFVPWILVKAWILPLPNTVQEQVDEAIGHGFDGMIVYVDEAGKPPAFYTGGWKNRENKIPADPKSLFKIASISKLYVAVSIAKLVNDKRLSLDETLADYFPELVGSIENAEKITLKLMVQHRSGIPNFTSNPKFWENEQENGKKALDFALDLPASFEPDEGYEYSNTNYLLLRKIIKKVVGYSHQQYIKEEILIPLGLKNTFFSLNEVNIDDVMSGYYVGIDADLKTNENGMLATAEDVGIFLRALNDGSVLDEGEQEIYASIYVYEHGGLVPGYQSLAEYHKDIDTVVVQFINTTDFNGYEWNLSEIVINRIVKIMRNEKVD
>NZ_CP019288.1|WP_160127655.1|225282_225918_-|hypothetical-protein
MKKILQALLIIFLLNSCSNGTKKEASKETKVETKDVSKIEYPLDSLLSYDSEVALKKVYGEHVKRSVGYYPEGMGEYATTVLFPDSKNQVEFVWEDDSIHYNKLQYIRLAGKQTDWKTKEGITIGTDMKTLETLNKQPFGFFGLEWDYAGAIDWKDGYLEERNIFGSLAYPTDSMPEDFMDLHGDHTIESSSKIAQKANLILSEIIMKPSN
>NZ_CP019288.1|WP_160127656.1|226052_226403_-|ribose-5-phosphate-isomerase
MPRIEYRVYVVELSKRVFTENTKFRLANPQFNGVLECLYVGMTSKTPKERFLQHKTGYRNQKGHKLSSNIVEKYGLYLRPSLYNHIDAFTTRLQALKMEKILALELRRKRYAVWFN
>NZ_CP019288.1|WP_160127657.1|226730_228389_+|acetolactate-synthase-large-subunit
MKASDLFIKALENEGVEYIFGLPGEENLDMLDSIRKSDKINFVLTRHEQGAGFMAATYGRLTGKAGVCMSTLGPGATNMVTPAAYAQLGAMPLVIISGQKPINRSKQGNFQIIDVVEMMKPLTKYTKQITNGDQVSSIIREAFRRAQEERPGAVHIEFPEDVAQEIVESPRIFDVVDAKMPHAETNAIENAAKMIEAAKMPLLLIGAGANRKRASNSLAEFVDTIGIPFFNTQMGKGIIDERHPLYLGTAALSDNDFIHEAIKSADLIINVGHDTIEKPPFFMHPEDERKVIHVNFFPAEIDEVYFPQLNVIGDIATSIQQLTKALKPIAKSWNTDFFMKIKKNVSEHLAKYEADDRFPILPQRTVKIVRDILPDDGIVTLDNGIYKIWFARNYPAYVPNGLLLDNALATMSAGLPSAMMVSELYPDKKVISINGDGGFMMNSQELETAVRLNLNLVVIILNDNAYGMIQWKQEKEELEKYSLDFGNPDFVKYAESFGASGYRPESVEDFKYDLETSLNSDGVHVIDLAVDYSLNHKILNVLLKEYSENIKK
>NZ_CP019288.1|WP_160127658.1|228392_229760_+|aldehyde-dehydrogenase-family-protein
METAKSINPATGEQIAEYNRISTKEAENKVAKANEVYQTWRNKNFEERAKLMHKLADVLEDNKEEYAQLATKEMGKIIGQSRGEVEKCANICRYYADNAAELLADTNVDTEASKSYVTFQPIGVVLAVMPWNFPFYQVIRFAAPAIMAGNTGVLKHASNVQGCAFALEEAFEKAGFPKGIFANLNIGSDAVKAVIENKHIKAVTLTGSEPAGRSVASIAGENLKKTVMELGGSDAYIILEDADLEEATDLATFGRLQNNGQTCIAAKRFVVLDEIYDDFLTIFTKKMKDKKMGEPTEKDTFLGPMARKDLRDELHEQVGKSVSQGARLVLGGNIPDSNGAYYPATILAEVKPGMEAFDNELFGPVASVIKAKNEKHAIELANNSNYGLGSGVITGDKKRGEKVALQLEAGSSFVNKLVVSDPRLPFGGIKNSGYGRELSSYGIREFTNTKSIWID
>NZ_CP019288.1|WP_160127659.1|229943_231458_-|M20/M25/M40-family-metallo-hydrolase
MKIQFKICLISLVFLGSNLAFSQTNWDEKIQQELPSILQKHRELVSIPNVASDEENMLKNVAWVTKEFEKLNFEVSLLETTTLPVFLAEKQVDKNAKTILFYLHLDGQAVNPAKWNQKDPFRPVLKEQDAEGVWQIINWSRIKTHINPDWRVFGRAAADDKAPIIMMLSALEFLRKQQQELKYNVKIILDLQEETQSEAFLSTLETYKNRYAADYMIIMDGPAHPTNKPTLTFGCRGIATCSITIYGAKLPQHSGHYGNYAPNPVFNMSHLLASMKSDDGKVLIDGFYDGITLDEKTQQLLSQVPDDNEKMKADLGIVEIDSVGRSYQESLQYPSLNVRHIETSWKGPGLKTIIPEIATAYLDIRLVKETDGENQLEKIKKHIENQGYLVLDREPTDAERLQYSRIATLKMNAGVNAFRTDINSFIGTKLRETLEAEFGETPILIRTMGGTVPITPAIKVLNIPAIIVPMVNMDNNQHNPNENIRIGNISQGIKMCLAILSMKI
>NZ_CP019288.1|WP_160127660.1|231800_232184_-|DUF3037-domain-containing-protein
MQDKVTFEYAIIRFMPKVEREEFFNIGVIVFSKRKKFLGLKYHIDAEKLAAFSCEITRKELTEYLKAWEFICKGTPNGGAIGAFEISDRFRWLAASKSTMILCSPTHSGLCHDPSIELEDIFEKYVL

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Crispr_ID: NZ_CP019288_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_2

593372-593470

Orphan

Consensus_repeat	Method
CAAAATACTAAGGGCGTAAGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_2

>merge|NZ_CP019288|2|593372-593470|CRISPRCasFinder
CAAAATACTAAGGGCGTAAGCGATTTTAGTTTAAAGGTTTAAGAGTTTATTACATTATGTGAAAAATTCACATACCAAAATACTAAGAGCGTAAGCGAT

>NZ_CP019288|2|2|593372-593470|CRISPRCasFinder
CAAAATACTAAGGGCGTAAGCGAT	TTTAGTTTAAAGGTTTAAGAGTTTATTACATTATGTGAAAAATTCACATAC
CAAAATACTAAGAGCGTAAGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160127942.1\|594698_595778_+\|adenylate/guanylate-cyclase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143636
NZ_CP019288.1\|WP_160127941.1\|593702_594620_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP019288.1\|WP_160127950.1\|600514_601414_-\|DUF72-domain-containing-protein	unknown	unknown	gnl\|CDD\|376655
NZ_CP019288.1\|WP_160127945.1\|596676_596979_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127940.1\|591900_593214_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_CP019288.1\|WP_160127947.1\|597360_598101_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP019288.1\|WP_160127935.1\|584091_587055_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP019288.1\|WP_160127932.1\|576350_578252_-\|DUF5011-domain-containing-protein	unknown	unknown	gnl\|CDD\|366209
NZ_CP019288.1\|WP_160127938.1\|590913_591246_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131851.1\|575733_576291_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP019288.1\|WP_160127943.1\|595783_595984_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224393
NZ_CP019288.1\|WP_160127937.1\|590396_590720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127944.1\|595983_596430_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127933.1\|579016_580699_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_CP019288.1\|WP_160127946.1\|596968_597226_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127939.1\|591345_591528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127948.1\|598185_598920_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160127936.1\|588035_590231_-\|TonB-dependent-receptor-plug-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP019288.1\|WP_160127934.1\|581000_583112_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366721
NZ_CP019288.1\|WP_160127949.1\|599612_600011_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160127942.1\|594698_595778_+\|adenylate/guanylate-cyclase-domain-containing-protein	gnl\|CDD\|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	1.62927e-27
NZ_CP019288.1\|WP_160127943.1\|595783_595984_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	1.03812e-23
NZ_CP019288.1\|WP_160127940.1\|591900_593214_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	5.04343e-83
NZ_CP019288.1\|WP_160127947.1\|597360_598101_-\|hypothetical-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	0.00175572
NZ_CP019288.1\|WP_160127935.1\|584091_587055_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	9.74017e-46
NZ_CP019288.1\|WP_160127932.1\|576350_578252_-\|DUF5011-domain-containing-protein	gnl\|CDD\|366209	pfam00629, MAM, MAM domain, meprin/A5/mu. An extracellular domain found in many receptors. The MAM domain along with the associated Ig domain in type IIB receptor protein tyrosine phosphatases forms a structural unit (termed MIg) with a seamless interdomain interface. It plays a major role in homodimerization of the phosphatase ectoprotein and in cell adhesion. MAM is a beta-sandwich consisting of two five-stranded antiparallel beta-sheets rotated away from each other by approx 25 degrees, and plays a similar role in meprin metalloproteinases.	2.20601e-21
NZ_CP019288.1\|WP_160127941.1\|593702_594620_-\|hypothetical-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	6.56343e-10
NZ_CP019288.1\|WP_160131851.1\|575733_576291_+\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	1.56397e-17
NZ_CP019288.1\|WP_160127949.1\|599612_600011_-\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	8.00488e-33
NZ_CP019288.1\|WP_160127933.1\|579016_580699_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	4.96399e-07
NZ_CP019288.1\|WP_160127950.1\|600514_601414_-\|DUF72-domain-containing-protein	gnl\|CDD\|376655	pfam01904, DUF72, Protein of unknown function DUF72. The function of this family is unknown.	1.19264e-66
NZ_CP019288.1\|WP_160127936.1\|588035_590231_-\|TonB-dependent-receptor-plug-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.83578e-25
NZ_CP019288.1\|WP_160127934.1\|581000_583112_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|366721	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase. This family consists of various amine oxidases, including maze polyamine oxidase (PAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.	2.26878e-23

>NZ_CP019288.1|WP_160127940.1|591900_593214_-|DEAD/DEAH-box-helicase
MSKSIKNQREILAKLGITTLNEMQEEAKLAISSHPNTILLSPTGTGKTLAFLLPILEELDPKNEEVQVIILAPSRELAIQIAQVTRDMGTGFKTNEVYGGRNFSKDKVDLKHRPAILVGTPGRVADHLRRETFSTKEIKTLVLDEFDKSLEVGFEDEMKDIISLLPNLEKRILTSATKDMEIPRFVGMRNPLLINYLGEKIAKLKVKRILSPSKDKLDTLLNTISLVANQPGIIFCNFKNTIQYVSDFLTSKGIPHGCFYGGMEQKERERALIKFRNGTHQIIIATDLAARGIDVPEIKYIIHYQLPMRSEEFTHRNGRTARMHAEGTAFVLQWQNETVPDFISNVEEVPQISSGARPEASGWKTLFVSGGRKDKISKGDIAGLFMKQGKLTKDEIGMIELKSDCAFVAVAASKAKEVIKLASETHLKKKKVRITII
>NZ_CP019288.1|WP_160127939.1|591345_591528_-|hypothetical-protein
MRTMNLTSLTLNKKVISNLQNATIIGGANKTYPLTKCKLEPIDTTTTFQPIPNPDDALPI
>NZ_CP019288.1|WP_160127938.1|590913_591246_-|hypothetical-protein
MKRICQFLSILTVTLVCISASTQQLQDDDCKFEGKKLYGKIRFVESSGNADVKIKIVNSFPDIKVKLVENFADDCGEWQVVEYGEDLKVYVAENFADIKVKFVTSFPGID
>NZ_CP019288.1|WP_160127937.1|590396_590720_-|hypothetical-protein
MKSISLILGILILALALKPCSDGFNTEHESDTEIGLEHNHQNDHDDSCAMLCVCNCCGMLVISQVPPTFVLQSKKIISTQINSHYESHYRFDLLFSIWQPPQFSELT
>NZ_CP019288.1|WP_160127936.1|588035_590231_-|TonB-dependent-receptor-plug-domain-containing-protein
MQKQIWSILFLFILCGVVNAQNNDINIKVFSEHEKTPLLGATVLFEDLEKGAITNLDGVATFKNIPDGTHHVMISFVGFKTIETNVTLPTSKELIFYMEEEKGELDAVVIESTRSSRTIRRIPTRIEYIGGEELGEKNMMNSANISMVLRESTGIQMQQTSLSSGNQNIRIQGLDGRYTQLLRDGFPLYGGFSSGLSIMQIPPLDLKQFEIIKGSASTLYGGGAIAGLVNLVSKTPDFEPEMDIMLTQTQASGTTANVFYSKRNEKYGVSLYGSSNLQKVYDAEDDGFSNLPEIKSFSFNPKFYYYPSEDTTFWIGLNGTYDDRIGGDIDKIENGDNGTNQYTEENISKRLSSQAVYTTKLDSTRNFTIKNSISYFDRELNVPNMQFKGKQINSFTEVALNHTNEKNDWTLGANLYTTNFDEDDSAALQRDQNDVTFGAFVNTTFDLSEKWILETGLRTDIADSWGIFVLPRISLLYKNDTGFSSRFGGGLGYKTPDIFTEEAEFLNFQDVLGIDKNSLKAERSYGLNLDFNYKTKLFNDTVGFSINQLFYVTSIDDGLLLNLNSDNLFQFENAPGEILSKGAETNVKFSYNDFKWFFNYALIDTKLRYLAGNPRKPLTAKHNAGSVIMYETSTWRLGYETYYTGSQVLSNGTETTDFITMGFLAMRNFSWGGIYTNFENFTDRRQSRFSSLVPPTNNNSDFPEIYAPTDGFIFSVGIIIKPFGNHSDHHD
>NZ_CP019288.1|WP_160127935.1|584091_587055_-|leucine-rich-repeat-domain-containing-protein
MSKEINPSDFENELEYVEAVTGINVPTKDYELNKDGKLITLNLSNNRISNIDFLTNLTSLEILDLSENKISNIDALKNLTSLTALNLYQNDISDISALSKLTSLTGLYLSDNQISDLKPLSKLTSLTIMNLDNTQIRDLNPLSELTSLIDLSLQENQISDLNPISKLTSLTELYLSSNQISNLKSLPKLTSLTYLDLSSNLISKLNPLSELKFLKTIYIDNNPCTVNENLELLENHIDFLNLWLAKNKLEDKISVLMPKKVVFLGNHASGKSSLLHYLQKETYALHTDTTHVLNVTQHKLKPTESTYVKSLFENKEKIKEILPLMYYDFGGQDFYHGLYQSFSSKTAFQIVVYCANQTEISLGEDTNGYDTYTYPLSFWLKEKEYLEKGTKNPYFIVENKIDEKVTSAFAKDYPIVCDFDAPNGIFHVFLKKLVPVNVIKENNNRLQLEYLKKQLLQELYESQVVSERVIDFYKKVYAESIEAGLKIEKRSSYTIEGISAENMLTQLQLLENSGVLFLSEDKTQVIANPKAFITHIHENILKQDSILKKEGKISFEDWKAIKKGKHAKLIESFMLKQKTMFIDTYAEAYVFPNYLPLYTQDEERYFLNVSAQHMAFSIQLQYFVPFGFINVLIHHFGKEPNKKKFWRDAIYFIQHEDEKPKANVFIVVNIPKLCLDVSVESRDTTFNVQKYKRYLWLCLSKMYHQQPLISWEDFKKEKTTSKDEIEKHLEEKALLKHNEFPETAKVSIDGKYYALLSTLKNRIDTNEYNIQVTNEQGRSKLLPLYQFQVFTEKSIKRMKKVAISYSKDDLALVNEFIKSLVPLQDDGLIESPVWYCTDLKPGTEWDKEIQENFETADMIFFMVSPNFLATNYIKEHEIKTAIQKRTKQLNANKPVGEQLKIIPIILDHCSWVRKDQTMNLGQYNALPYTAKPVLDFDNINKAWYLTTESIRIAIEHDNDSSFRLDSSKEIQKLRERLIAGYLDKNSK
>NZ_CP019288.1|WP_160127934.1|581000_583112_-|FAD-dependent-oxidoreductase
MSYFSFHPGNKSSGKGKKAKGSVRKAFSDWIIENHGEDYTKTLQKQRSQVQKVGLIQEQMFKADDSEKKPLIGIIGGGFAGMYAGLILQSLGLEFEIFEASDRVGGRIDTWYSSEYDPESKENKGLYGEVGGMRIPQFSNDMLPVQHLALSLNYVLERNGLEDKMLRWRKFYYNSDFQRLRFNNMKAPIFAPEANTNSMNFGEAQGGDLPEVWVTEKTDENGNKFLPINVILDKVNGPFIEAINKSFETGFAKLMRFDNYSMWAYLTNVFTLADMEEYYDPKMGAPCENLSFNIASYLETVNVGTGMYSVSFVEMVIAVYDWDGSKNSYDLEDPNIYMVTMNNGMQHFPDACRTVLNLENGVTADDGNLAQVLIGMKKGQNNEYGYSPPNLTKDAEPPSSVPPADPKGTANTDKNPSKKKERVFMNHKVTQAIYDESLFDKNGGMRLVMDHTTKDGKKESVEKEYPYVISTLPNGAYLSGQEKTNFFDDLSFSKARALRECNYMPAFKAFVTFKKQFWKDLGNRQYETGLGVSASDRSNRQIVYPSYGYDADKGVLQVYSWAQDAERMGALTDEERVNECLKGIQFMYPEVDIYEHYAGYHPEVTTKTWFWDQHAGGGAFALFNPGQFKNLYPTLLTPEFKGALNIAGECCSVHHGWIVGALDSAYNSVNNILEQMNATKHLVKMKAIWGQLTAPDVAGNVKK
>NZ_CP019288.1|WP_160127933.1|579016_580699_-|patatin-like-phospholipase-family-protein
MHEDFIPFKSIGLCFSGGGYRATFFSLGVVSYFEKIQYQNASLAKNVEAFSTVSGGTLLGVAYTKAVQDPSFDFKSFFQKFYTSFEPENDKLLKTAIGKLGNDEVWKANPHKKRSLINAFALTYADMDIFKGEFSHFETPTSEHLKHVCFNATDFSFGLAFRFQNTGMFGNKPLNNTQVNNLKNEIQLADIVASSSCFPLGFEPLVFPDDYIKNQQSSDYKSLKNLERFCDGVGIMDGGIADNQGIGSMMKISRQRKTRDRDLDLMVINDVGSFKMVPWQPEPKNLNESASIKSTVSKVLGYLKVKPLYLIILLLGILMMVLNSLEIIKGKAWPAFYIIGGIITGLGLVLTIGGLVAGIVKGFVVRSIASLFKKNVPGPLVDDVLSFKKLSIGLVQRMLTERVSSTVLMVNDIFLKQVRRLNYRLLYSDRDLQHKLITSTVYELNGEATAYTTTFRYNKNISLAPSTLLKNVGLTASETPTTLWWDKTDIAKDRMDTLIACGQFTTCYKLMDYILKLKKNKKVELSEEDTIAVDALYTALESDWKQFNENPMFHVEALKQ
>NZ_CP019288.1|WP_160127932.1|576350_578252_-|DUF5011-domain-containing-protein
MRKLLHFVVLVLLAISLQAQTQQSGETTSQDYQAPTIPEDVIAVNTTETATDLSWRASIDNYNMSGYKLFQNGVLVETLTETNFVMTGLSPNTTYTFYVTAFDTAGNESRESDQATITTLEDIPVYYCESRSFDVNEEYIARIQCEGIDNGSDARFYSEFTEIVTDVMKNGECTITITPSWTTTAYNEGYSVWIDYNQDGDFFDPGEQVFSQSPTTQASISGTFTIPTSIPNGHTRMRIAMKYDAIPQPCEEFTYGEVEDYTVNIISELRDSTVPVISLNGAETIDLNVGDEYTEFGAIATDNIDENLTPNINITGDVDTAFAGMYTVRYNVNDTAGNNATEAVRTITVAPVNNGCTNGINTFPYTESYENTLGSWTQSTQDDINWIYDYNRTPSNGTGPSNATDGNTYIYVEASGNGTGYPNKQAVINSPCYDLSNETSATFSFSYHMYGANNMGTLALEASDDNGLSWTPIWSEAGNKGDRWLNANIDLSQYVGASVQLRFNRITGTTWKADLAIDNVALNTSYAARGTATTNSKDKNNTAASKVNSIATPDEFGEENTLTIYPNPVRGNVLNIKLDTGNAKSFRIINLYGQALLTGTVDNQINVERLKSGIYFIEVSDGTQTLTKKFIKQ
>NZ_CP019288.1|WP_160131851.1|575733_576291_+|biopolymer-transporter-ExbD
MSRKTISGVNAGSMADIAFLLLIFFLVTTTFTEDEGIRGTMPSPCPEGVDCSSDVAQKNIFSIQLNRNNELMANNETISVDKLRESVKAFIDNNGDQSCEYCNGVKKVDMSDNPQKAIISIQTDREASYDHYIGVQNELVGAYYELREELSKTKFNKTVEELTEEELTILKESYPFRISEADLNQ
>NZ_CP019288.1|WP_160127941.1|593702_594620_-|hypothetical-protein
MKNFLTLIIVSMCFFACKSEKKEVDKTPEKENVEVILIPKLLHEVNGLTHCESVVYDKKRNVLYASLIGNREKGDGSIAKISLDGKIIDSIFISGLNDPKGIAITGDKLYVSDQLNLVEADLNTGKIIKTYTNDATLFLNDVEIGEHGAVYVSDTSKSSIFVLTPDGIFSEWLNSNDLEHPNGLLKVGNEMYVAAWGNVIGEGDDKKQSGNFLKVNMETKEIVKVSKDTLGNLDGVQIYDKDNFLISAWNTGKIMKINTNGDVENILTVGRSVGDILYIPEKKLLALPMNIQSQLLIYEFQEAGK
>NZ_CP019288.1|WP_160127942.1|594698_595778_+|adenylate/guanylate-cyclase-domain-containing-protein
MSRTFRQYLLFTLQSIGFWMLAFSFLIVIRYFGVFEEKGVSVLPKYRLALTDLLAFVSLVSIPFGIFYAAIEFLFDRFLSKSLSLGIVIFAKTVIYLILLVVLVSFVVDYTGYILDDSTETGNDWWYTNKTFWTIVVFFIVASLVFSFIKIANEKFGRGVFINMLLGKYRKPQEEKRIFMFLDLKSSTTIAENLGHYTYSQLIQDCFYDLNSIVQRYDAEIYQYVGDEAVLSWTYERGIKRNNAVQLYFTFQKRLNTRRNHYQEKYGLIPEFKAGIHGGTLMVAEVGSIKKELAYHGDVINTTARIQAECNTFNANVLISESLLQEMKLRKIFTTKRINDLLLKGKVQTINIYSISTEN
>NZ_CP019288.1|WP_160127943.1|595783_595984_-|helix-turn-helix-domain-containing-protein
MRNRIKIERAILDITQDDLAKKIGVSRQTINSIEKGRYVPSTVLALKLSTVFNKSIGEFFFLEETD
>NZ_CP019288.1|WP_160127944.1|595983_596430_-|hypothetical-protein
MTKEKSCDRDKKLFEKFKNFGLPYSFKKIGIAIILLSILTIIIAKTADFTNPTLKFAMKRIMLIGLLVIALAREKIEDERILTMRGQAFSMAFIAGVVYTLIQPLVNYIADLFVKDDKGPLTDLGDFQILWFLLTMYLLFFYMLKRKS
>NZ_CP019288.1|WP_160127945.1|596676_596979_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MDFELKLTLDVEAQIEIEKAIEYYETLQEGLGREFYYYLEGYFKTLQLGNVFFQIKRKPVFRELALKRFPYVIIYEHIEDEIYIYSVFNTQQNPKKKKRH
>NZ_CP019288.1|WP_160127946.1|596968_597226_-|hypothetical-protein
MGAIELRDKLIKQFEIFIQDESKLVTLDGVFDSMNVSPSDSNTNSLIPEQHYKVVEVRRDKRLNSETQGKNWDDVKLELKKKYGF
>NZ_CP019288.1|WP_160127947.1|597360_598101_-|hypothetical-protein
MYLKSKMVSSSYIKTKIRITIALILIGMLSAYAQKDTTKTKTTDVDITKGRIKLPFPKPEEPLKQQKNSPNFMEFKTPSLLTKKRTSLIKLPESNLTSLKEEKEIQFVGQEQFVTRNKEFERKLNNKDKEIRPEYKVEQYLGDFRSNGKFVEIVCRDHEFVDGDRVRVFVNDVIVADNIRLEAAYKKINVTLEKGFNKIDFQALNQGSSGPNTAEFRVYNDKGELISANEWNLTTGVKATMIIVKE
>NZ_CP019288.1|WP_160127948.1|598185_598920_-|hypothetical-protein
MKVLQTIPVYNRKSKRVTSLKTDDFQIIKNEDEEFFDVQGDFVIIKDRFFRAPHLVKPWTFWIENGKPQVAPTKDIQHTKVLFTVEAPDKNEFDYKNEFRATNPLTGYFQSFKAGFLELMAQIASSEISNFEVTFYTLVPYQTSLHYLLGKRGSNQTRLNFWFYGWINLKYRNDFMNYLKRHTFDYYINGSTRAFKGIISQELSRVINVEYQVHHPNSGFWKRKNINLGIKKIIHLELTAIAWT
>NZ_CP019288.1|WP_160127949.1|599612_600011_-|acyl-CoA-thioesterase
MRFHTRKWVKPEDLNPNGTLFGGRLLAWIDEEAALYAIIQLENPKVVTKFISEIDFKSSAKKGDIVEIGIEVVKFGRSSITLKSEVRNKMTRETILTVDNIVMVNLDKNGNALPHGKQEIEFVKDRLDSDED
>NZ_CP019288.1|WP_160127950.1|600514_601414_-|DUF72-domain-containing-protein
MQFGKVTNPENIDFTLPENHPETEVVLQTYKNDATPSIYVGCAKWNKQDLKGFYPRGTKDELQYYASQFNSIELNATFYRMFPAAQFEKWRDKTPQGFKFFPKITQEISHWKRLQATEAIVDQYIFNATHLQEKLGTIFLQMHSNFSPKDFDRVVQFAEFWPKEVPLAMEFRHTDWYNDEKVANELYHLLQENNIANILVDTAGRRDIMHMRMTNNEAFIRYVGANHESDYARLDDWVDRLEQWIDFGLQKIHFFIHQNLEVESPLLSAYFTKKLNERLQVNLTIPKTITKPQKPETLF

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019288_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_3

1328665-1328774

Orphan

Consensus_repeat	Method
TAGTTCCCGTGAAAACGGGAATCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_3

>merge|NZ_CP019288|3|1328665-1328774|CRISPRCasFinder
TAGTTCCCGTGAAAACGGGAATCTTTAAAGTACTACGTAACCCCAAAACTTTAAAAAAGAAAGCTGTATTGCGGTATGTTATACTTACTTCCCGTGAAAACGGGAATCTT

>NZ_CP019288|3|3|1328665-1328774|CRISPRCasFinder
TAGTTCCCGTGAAAACGGGAATCTT	TAAAGTACTACGTAACCCCAAAACTTTAAAAAAGAAAGCTGTATTGCGGTATGTTATACT
TACTTCCCGTGAAAACGGGAATCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160128489.1\|1330298_1330475_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128492.1\|1332817_1334500_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225117
NZ_CP019288.1\|WP_160128486.1\|1327286_1327988_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128481.1\|1324079_1324697_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381604
NZ_CP019288.1\|WP_160128482.1\|1324701_1325046_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128483.1\|1325070_1325538_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128494.1\|1336888_1337068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128477.1\|1321802_1322666_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235175
NZ_CP019288.1\|WP_160128493.1\|1334593_1336801_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|224684
NZ_CP019288.1\|WP_160128488.1\|1329222_1330005_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP019288.1\|WP_160128478.1\|1322680_1322866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128479.1\|1322878_1323634_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128490.1\|1330494_1330962_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128491.1\|1330974_1332384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128496.1\|1338939_1339134_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128487.1\|1328996_1329152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128495.1\|1337336_1338656_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271175
NZ_CP019288.1\|WP_160128480.1\|1323640_1324075_+\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|372685
NZ_CP019288.1\|WP_160128484.1\|1325630_1325774_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128485.1\|1325961_1327125_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160128492.1\|1332817_1334500_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.38844e-12
NZ_CP019288.1\|WP_160128477.1\|1321802_1322666_+\|hypothetical-protein	gnl\|CDD\|235175	PRK03918, PRK03918, DNA double-strand break repair ATPase Rad50.	0.00855754
NZ_CP019288.1\|WP_160128495.1\|1337336_1338656_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271175	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain. The DNA breaking-rejoining enzyme superfamily includes type IB topoisomerases and tyrosine based site-specific recombinases (integrases) that share the same fold in their catalytic domain containing conserved active site residues. The best-studied members of this diverse superfamily include Human topoisomerase I, the bacteriophage lambda integrase, the bacteriophage P1 Cre recombinase, the yeast Flp recombinase, and the bacterial XerD/C recombinases. Their overall reaction mechanism is essentially identical and involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. The enzymes differ in that topoisomerases cleave and then rejoin the same 5' and 3' termini, whereas a site-specific recombinase transfers a 5' hydroxyl generated by recombinase cleavage to a new 3' phosphate partner located in a different duplex region. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	3.12349e-11
NZ_CP019288.1\|WP_160128480.1\|1323640_1324075_+\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.49679e-12
NZ_CP019288.1\|WP_160128481.1\|1324079_1324697_+\|hypothetical-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	1.10367e-05
NZ_CP019288.1\|WP_160128493.1\|1334593_1336801_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|224684	COG1770, PtrB, Protease II [Amino acid transport and metabolism].	3.29615e-85
NZ_CP019288.1\|WP_160128488.1\|1329222_1330005_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	4.75145e-46

>NZ_CP019288.1|WP_160128486.1|1327286_1327988_+|hypothetical-protein
MAKNSVKNLKNKRTLTSAELMSLEFDTLHFDDGWENFLQNPAINMKIGISGNPKNGKTAGACQLAAYLTNFGKVLYNFADQGYNKNTLDLWALAGLDKNKNAEASDFQTLEALDAECASGKFQFIFIDLINGYIDRTKIKPHEFEDRFLKKYPNISFILIFEVTKQGSFKGDQKWMHIVDAIIEVKDYLMQSRGRYGSGYHIVWEEQFKKINPKKYAELVPAEQTKSPSVLYL
>NZ_CP019288.1|WP_160128485.1|1325961_1327125_+|hypothetical-protein
MQKRKTTNQQIKATTYTKKLMPLNQQKALTQQNSLFADSLVKRLEKELAEIPIEPQGDSIKKSTVYSHYFYGGSDWYITDIVTETNMLFGYVILNGDTQMAEAGYISIEEITKNKVIELDFYFTKDTLENILYKKYPKDYPNPRASATKEKTAASKPTPQKKILKKTVDIKMVDHFSTEYRLIRRFYNLIRLNKTATFRRIQLVYMAFQKAALDRSIRKTSSDADLFTKINKKVIALFDIVNPVKDDADIEFSEKKLYNEMETFVKEQKVNYAVTLLKSFIGMQGYQPEIKKAMNLLKRIDNSFKNEKVTKTNRLYKDVVNAKKELETYLAAPTEKIGPELVGLSIPVRSLCTNRIKCVGLRKDGKLNKGYRFLRGGSVFASKKKTV
>NZ_CP019288.1|WP_160128484.1|1325630_1325774_-|hypothetical-protein
MLEKFKIQMVTNSHHIFGGVDSIIIPDIDIIKPNATDDYIIVDIDVL
>NZ_CP019288.1|WP_160128483.1|1325070_1325538_+|hypothetical-protein
MKKEILAVVGVGVLAIGYYSYKKYKVVKAIIQKLVVRPKDIKDVKLSLKKISFTISLELINNTHFDLGFTTGSIITLNNVKIYTPTGHLLADIKTNVSSLEIPAYGSYTITDLHVEMQTHSLLTQFDKMMEYIATNSLLYELTIVAFGKEFSIAT
>NZ_CP019288.1|WP_160128482.1|1324701_1325046_+|hypothetical-protein
MIGVKPKKKKEFIDIDLSLIDGQAKIYGKVTERNIHDNSVTNAVEAQVSVYKNGNLIGLTTTSEDGTYFIESINSDDDYTAKFEKDSVFVTPVFTLASRQAKQINIELTTDAIF
>NZ_CP019288.1|WP_160128481.1|1324079_1324697_+|hypothetical-protein
MELIFQENVPTVYGSSFITSVKDYSQSLNIDPNWLMAVMYFETAGTFSASIRNPYSDATGLIQFMPTTALDLQTSVDELALMTAEEQLYYVYSYYYPYRKKIKSYVDLYLATFFPVAMGKASTYVLQTSNLSASTIADVNPVFDLNNDRQITVGEITKVITDKIPIAWRDYFLGYSSGGGIAKKKSLIPKAIGVSLLGYLIYKIA
>NZ_CP019288.1|WP_160128480.1|1323640_1324075_+|carboxypeptidase-like-regulatory-domain-containing-protein
MSQFNFNSTCAKDTRTITITGQVFDTITHETLPFANVYLTIDNSIGTAANEDGIFSIDIPEGSTLTVSFTGYLPFKFRVTQEFTKVFLTRDDQLDTVYLEGPKKKKSNGWLWLLFFGGLVAVATNQEEEQKGTSKTRKPIKAKI
>NZ_CP019288.1|WP_160128479.1|1322878_1323634_+|hypothetical-protein
MSQLGNPLAKAVVTKGASKAGDFLKNNTLVVVGTLATVYAWYKLPAYLKRLAAERYARANIGHPVVTAAAIIHESFSRIGYKDGFLSFLLPEFDIFTDEAALMDIASQIDDVKLVAQAYKILFDRDLFKDTLNGLSTTELSSFYNAIRSPSHNSDPQLDSNYYLVGDILYCAKKSGIQVPQVELQNDDSWLTTQELYGNYNHKQEIGQVVATDIYAPENKRYYIVERCSIWGGFWCYYGIVWSDQVINQEI
>NZ_CP019288.1|WP_160128478.1|1322680_1322866_+|hypothetical-protein
MIKVTGNSDLDIDLKTEALQELSKLPTEVLARLVELSKIKKALGYLSTETGFATIKTVLGN
>NZ_CP019288.1|WP_160128477.1|1321802_1322666_+|hypothetical-protein
MQQIIDHLDSNAQNAIVISFQNMKMINPFMRVNKYEFTKNHIIKGWNSISAFLKGLKNEGFKSGTHVYLKKPNGNTSKTIGEPITLQFSTDINTSQHMEQQQTVQQNTNTQNGYHQMPYQGMGANVMGMHPAESKLEAVTAKYDDLKERYDELKDEYKDVRSSERQLKEVNNSLKLEVNTAEKHMELALLQANLSQKSFMDSDAMKSLAENLAPVIPHMISGQTPQIGMGNSHQNISNDKKQFIDFIASSKVQDLDVNFIYKLYKNLVKNKDFAASLQGLLTQFNIT
>NZ_CP019288.1|WP_160128487.1|1328996_1329152_-|hypothetical-protein
MEETNTNFIIGLIIVGFMLMIAVIVLYFSFKESKKRNEVDDEIEEELKKNK
>NZ_CP019288.1|WP_160128488.1|1329222_1330005_-|ATP-binding-cassette-domain-containing-protein
MLQFESLHIENLSLQLVGKEQLLKSINIQFFKNQCIAIVCESEYEKNILVQILQKKEAYQNGSVTINNQISLNKVNTKDWRSILGIVPKNIKIFNSHVLDNIILEEHTISHKIHAFEDIEAFIQEYGFENFIQSLPQGYTTILGENGMQLSGGQKQILALIRVLYKKPQLLILDEFTSAMDRNTEHFVLQLLKRLKYKISIIFISHRLHSLKQIADHIYVIEDGQTIVHGSHKELLRTANFYSDFWTDILQEKDTIKLIL
>NZ_CP019288.1|WP_160128489.1|1330298_1330475_-|hypothetical-protein
MENSIEAFSIIIVIYQIFAIAFIITAIVLGIKLVLKLLKLMDSQTNLNNERLEKLRNE
>NZ_CP019288.1|WP_160128490.1|1330494_1330962_-|hypothetical-protein
MKTKYALIFLCFILFACNPTYMPFESKKDKKKNVSLIKTKLNLTNKEYSIIKNEDSVLYSLSLSVGKDEKISRIERRLDSFIQKKYTQKELIAILKIDRNLPNRDLEFSRSKKSTTLNIKDMKELREFMNNGGKEKLMDSIFGIKFKDSIKKQKQ
>NZ_CP019288.1|WP_160128491.1|1330974_1332384_-|hypothetical-protein
MKRVRKLFRFLCILTLAMSLTNCQHDTVAEIQQEEALQKEFPFKSSVLSKQEVEANTKLSNQMRSLATLQSSSLAESVYNETYNFTVDTDVVKFVESTENDSHSYTFPISRENNTGSALENLVFSYNATTDDYEASLVTYHFNASQQQEFLLTQHVRTPYEISYESIAVNLSDIVGETSLPCTTNYTEYHTTPDTGETFVHSSSIGNVNNECEHEDTSGNTSCTVYTIITTDCPVSGSSSGSPSSSSNSPTGGGNNSGNIYIPPTTPDEIPNVVTSPVSKDLVMELTSQLDDIFGIGNWETNPTNDIENTIQLNSIDELIELRNRVVSGTFETVASEPVAGQSSFRIDTNSISVSSFPDVDIVTQAKIEIPNSTNGLTRMRVINVGSDLDGLTLFYDWTQISSENPDDGNGPAITVNGNLTTIEIIGRMDFEVSILGFKFTGKDLIKVVLVYDNILNEFQPQLSGIFYI
>NZ_CP019288.1|WP_160128492.1|1332817_1334500_+|helix-turn-helix-domain-containing-protein
MRTIFLLIIISFNSYLARAQNDTFKIIDSLSLESYEALEEKFYEYEYDDPKQARIYADAYLIKARTAKDSIQMARGYKYISFLYIDSENIPLILKYSDSIIYISKNSNHRSYPALGYNQKGVWLFEQGNYKKALDNYLIAQQYALKHNNINQLKDIKLAIAALRSRYGDYNESLLIYKDYLSFIKNQDNYKKDHSEDYLIGLYNVANGYLRMKNPDSARIYIDKGVKYSIELKDTISYSEFLTSKGIYKYQKKEYEAAIDVFNEAIKYRENYGLAMCFYYKAQSLKELGNIESALMNFKKSDSIYQETNDVFPELRQVYESLIDYEKSINNTQNQLFYIEKLLKVDSVLDSDFKYISENIIKKYDTAILKNDKQNLLEKLSNQKKKSSYIITILIIIGLLIILGSIYFIKYREKLYKRRFDELINQERKVEKSNLTENNTKIADDVTNIILRKLQRFEKEEKFLEPGITLSKVANLLQTNSSYLSKVVNSSMEKSFNTYINDLRIDYVITKLKKDKRFRKYAIKSIAEEIGYANSQSFSNAFSKKTGIKPSYFIKQLNNL
>NZ_CP019288.1|WP_160128493.1|1334593_1336801_+|prolyl-oligopeptidase-family-serine-peptidase
MRKVFIYAITIFIIYGIKKNKENIFQYPKISKVDSINNYWGKVVNDSYRNLENSKDSVVQNWYNKQGLYTENVINNISNRDSLASFLSNIDNRRSFHIGSLIITENDFYFYLKIKKDEKRRKLYFKKGFDGEEILLFDPTDFKPETKNDYVINYINPSRNAAYIVISLTYEGREYSEAIIYDVKTKKVLPQVIDHCWLDSFYGVDWLADNTGFTYLHFPNLYDKGKKSKSNTEAVLYKIGQDPKKLNVILSAKNNPKLKLDTINYPIVDIKSSSSKYLFAYMVNVGNYFDSYYADIDELGKGKINWKPLFKKEDKSYKTNGIIIGDSLYYRTAQNASNLKINVLNLVTKTTTTLVEESETEVIKDFEISKDGLFYGTLRNGVQAKLYKVGNEVKSEIKLPRASGSIGITSYDRNSNKLIVSLNGWVNSSQRFEYNTTTNDFKLKDLKPKGKYPEFEDFVVKEIEVPSHDGVLVPLSIIHHKDIELNGKNPVFMDGYGAYGDDMSPYFSPVTLAWVAKGGIYCTAHVRGGGEKGDAWHKAGMKTTKPNTWKDLIACMEYLVDNGYTSKEHNAIWSSSAGGILVGRAMTERPDLFKVVISEAGKMNPLRSEESSNGTNFKEYGTIKDSIECLGLIEMDSYLNIKDKTDYPATLVTAGMNDPRVAPWQSGKFVARLQEANTSNNPILFAIYKDSGHGSGTTIEQVYQEWANVYAFAFWQTGHPDFKLDEKALKKTKDK
>NZ_CP019288.1|WP_160128494.1|1336888_1337068_+|hypothetical-protein
MTHKNAYWFKYRKPYKGDSYVAVASETLDEAFKMIMVQYDVPNEDVFYLNRELEVLLPF
>NZ_CP019288.1|WP_160128495.1|1337336_1338656_+|tyrosine-type-recombinase/integrase
MSKLQVLLTNAYRNAYTLSKNLYTEPKIYDADGDLSKRWYVYYYYRNPVTEKLVLQPPLYMGVNRLKTKKERTEMLIINRIALHELLKKGYNPYETYKETDKRIEQQKKPAEGIEIDSQRKNYTVKEALFFALKQRKPHWKKKTAGTMVGHFNRFIEWLTINKLIDKNISELKKRDVSTFLNSLTKLQTKKQKQLREELVPVSPKTRNNFRATLSTLFAQLEEDEIIERNFITQIKINKSTPKKNKPFSKEQIIDIREYLDKNDPYLRTFIQFMSYAFLRNVEVCRLQVKDIDLASKRLYVRSKTAPLAIVPIIGELETVLRDMKLENYAPTDFVITRFEKPANWDIDENNKTNYFSKKFKLIKRILGYSDDYSLYSVRHTAATNIYNSLLAEGKSEEGALMHLMSITRHRSKAGLKNYLREIGATLPKDYSDMYTIDF
>NZ_CP019288.1|WP_160128496.1|1338939_1339134_+|hypothetical-protein
MKAETAYNVIKALSQDELLRLYEFLGVEIKNMPKKLSKRQTKKEKIIEAMEKILVAHFSERRLP

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019288_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_4

1625834-1625979

Orphan

Consensus_repeat	Method
TTGGTATTTTGGTATGCGAATTATTCACACATTGGATAAACTTATAAACCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_4

>merge|NZ_CP019288|4|1625834-1625979|CRISPRCasFinder
TTGGTATTTTGGTATGCGAATTATTCACACATTGGATAAACTTATAAACCTTTCAACTAAATTTCTGATCTTGGAATGTTAGTATCACTACGTTCTTGGTATTTTGGTATGCGAATTATTCACACATTAGATAAACTTATAAACCT

>NZ_CP019288|4|4|1625834-1625979|CRISPRCasFinder
TTGGTATTTTGGTATGCGAATTATTCACACATTGGATAAACTTATAAACCT	TTCAACTAAATTTCTGATCTTGGAATGTTAGTATCACTACGTTC
TTGGTATTTTGGTATGCGAATTATTCACACATTAGATAAACTTATAAACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160128727.1\|1614354_1615176_+\|sugar-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|187564
NZ_CP019288.1\|WP_160128731.1\|1619334_1621860_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|380191
NZ_CP019288.1\|WP_160128730.1\|1618532_1619243_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP019288.1\|WP_160128742.1\|1635229_1636138_-\|ribonuclease-Z	unknown	unknown	gnl\|CDD\|234602
NZ_CP019288.1\|WP_160131880.1\|1627742_1628669_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|274735
NZ_CP019288.1\|WP_160128728.1\|1615266_1617288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223864
NZ_CP019288.1\|WP_160128725.1\|1611750_1613031_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP019288.1\|WP_160128735.1\|1627045_1627651_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|372635
NZ_CP019288.1\|WP_160128739.1\|1632889_1633045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128729.1\|1617291_1618335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128741.1\|1633489_1635211_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160128733.1\|1623443_1625183_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|237874
NZ_CP019288.1\|WP_160131879.1\|1625191_1625773_+\|tRNA-2-methylthio-N6-isopentenyl-adenosine(37)-hydroxylase-MiaE	unknown	unknown	gnl\|CDD\|153119
NZ_CP019288.1\|WP_160128732.1\|1622077_1622266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128736.1\|1628686_1630789_-\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NZ_CP019288.1\|WP_160128734.1\|1626164_1626857_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP019288.1\|WP_160128738.1\|1631290_1631938_-\|pyridoxamine-5'-phosphate-oxidase	unknown	unknown	gnl\|CDD\|273138
NZ_CP019288.1\|WP_160128737.1\|1630788_1631274_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224973
NZ_CP019288.1\|WP_160128726.1\|1613262_1614345_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	unknown	unknown	gnl\|CDD\|234742
NZ_CP019288.1\|WP_160128740.1\|1633210_1633369_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160128727.1\|1614354_1615176_+\|sugar-nucleotide-binding-protein	gnl\|CDD\|187564	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs. dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.83322e-18
NZ_CP019288.1\|WP_160128731.1\|1619334_1621860_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	1.71808e-30
NZ_CP019288.1\|WP_160128742.1\|1635229_1636138_-\|ribonuclease-Z	gnl\|CDD\|234602	PRK00055, PRK00055, ribonuclease Z; Reviewed.	1.62348e-124
NZ_CP019288.1\|WP_160131880.1\|1627742_1628669_-\|rod-shape-determining-protein	gnl\|CDD\|274735	TIGR03706, exo_poly_only, exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response. [Central intermediary metabolism, Phosphorus compounds].	1.42674e-63
NZ_CP019288.1\|WP_160128728.1\|1615266_1617288_+\|hypothetical-protein	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	7.78712e-66
NZ_CP019288.1\|WP_160128725.1\|1611750_1613031_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP019288.1\|WP_160128735.1\|1627045_1627651_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|372635	pfam13568, OMP_b-brl_2, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	3.49554e-17
NZ_CP019288.1\|WP_160128730.1\|1618532_1619243_+\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	9.74879e-126
NZ_CP019288.1\|WP_160128741.1\|1633489_1635211_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.21476e-13
NZ_CP019288.1\|WP_160128733.1\|1623443_1625183_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	0
NZ_CP019288.1\|WP_160131879.1\|1625191_1625773_+\|tRNA-2-methylthio-N6-isopentenyl-adenosine(37)-hydroxylase-MiaE	gnl\|CDD\|153119	cd07910, MiaE, MiaE tRNA-modifying nonheme diiron monooxygenase, ferritin-like diiron-binding domain. MiaE is a nonheme diiron monooxygenase that catalyzes the posttranscriptional allylic hydroxylation of a modified nucleoside in tRNA called 2-methylthio-N-6-isopentenyl adenosine (ms2i6A). ms2i6A is found at position 37, next to the anticodon at the 3' position in almost all eukaryotic and bacterial tRNA's that read codons beginning with uridine. The miaE gene is absent in Escherichia coli, a finding consistent with the absence of the hydroxylated derivative of ms2i6A in this species.	1.03253e-84
NZ_CP019288.1\|WP_160128736.1\|1628686_1630789_-\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NZ_CP019288.1\|WP_160128734.1\|1626164_1626857_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.04671e-13
NZ_CP019288.1\|WP_160128738.1\|1631290_1631938_-\|pyridoxamine-5'-phosphate-oxidase	gnl\|CDD\|273138	TIGR00558, Pyridoxine/pyridoxamine_5'-phosphate_oxidase, pyridoxamine-phosphate oxidase. This model is similar to Pyridox_oxidase from Pfam but is designed to find only true pyridoxamine-phosphate oxidase and to ignore the related protein PhzG involved in phenazine biosynthesis. This protein from E. coli was characterized as a homodimer with two FMN per dimer. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridoxine].	4.71643e-109
NZ_CP019288.1\|WP_160128737.1\|1630788_1631274_-\|histidine-phosphatase-family-protein	gnl\|CDD\|224973	COG2062, SixA, Phosphohistidine phosphatase SixA [Signal transduction mechanisms].	3.32573e-23
NZ_CP019288.1\|WP_160128726.1\|1613262_1614345_+\|glycine-cleavage-system-aminomethyltransferase-GcvT	gnl\|CDD\|234742	PRK00389, gcvT, glycine cleavage system aminomethyltransferase GcvT.	0

>NZ_CP019288.1|WP_160131879.1|1625191_1625773_+|tRNA-2-methylthio-N6-isopentenyl-adenosine(37)-hydroxylase-MiaE
MLGLKLPTDPRWVNIAEKNIEEILVDHAFCEQKAASTAISLIVSFPEYPELVEEMISLVKEEISHFKMVHDKILARGWKLGRDRKDEYVAKLLQFFPKGGSRTTQMVHRLLYAALIEARSCERFKLLSENMKDEELATFYKNLMVSEANHYTMFLGFARQYGERTEVDEKWQALLDFEAEIMRDLGTSETMHG
>NZ_CP019288.1|WP_160128733.1|1623443_1625183_+|DNA-polymerase-III-subunit-gamma/tau
MEHFIVSALKYRPQTFKDVVGQQAITNTLEKAIERSHLAQALLFCGPRGVGKTTCARILAKKINQDGTENPDEDFAFNIFELDAASNNSVDDIRSLIDQVRIPPQVGKYKVYIIDEVHMLSQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRIGVKDAKEYLKFIAESQGVEADDDALHIIAQKADGAMRDALSIFDRVVSFSGKQLTRQAVTENLNVLDYDIYFAATDLILENNIPQLLVDFNETLSKGFDGHHFIAGIASHFRDLLVCKNEATIPLLEVGDQTKNKYLEQSRKTSQQFLMKGIELANGCDLKYKTSRNQRLLVELCLMQLASINYDGEKKNSDRFIIPATFFLINGKKIDPIVKIKEIETEVEVETKTEVEATETTEKTSEQKVETPPLVKPKIDISMMRNKVSGLSLSSIKAKQEHLKKQQGKVVHKKDLPSDAFTEERMREVWNEYVEKLDKKGEKIMWSLLSTDIPKLKNETTICLEMPNETMRIEIERAQYPLLEYVRTALNNYDVSLEIDVNELTAKKYVFTTRDKYEKLKEINPLVERLRKDFDLEI
>NZ_CP019288.1|WP_160128732.1|1622077_1622266_+|hypothetical-protein
MLKNILKLEGTQKLNKTAQKEILGGRRNVAECTNASHCPANHICQNGRCFDCYDPFSGSWYC
>NZ_CP019288.1|WP_160128731.1|1619334_1621860_-|T9SS-type-A-sorting-domain-containing-protein
MKKQYFLLFLFIVVGQLVSAQIVNIPDANFKNKLLGNSAIDTDGDGFLDSTLDYNNDGEIQVSEAESITVLKIGANFISSLVGIEAFTNLEELDCSGNFLTGTLEFSTIPNLKKLDCESNQLTGLNLSSNTNLEELFCKNNQILNLDVSANSNLLILNCSENAMESLAFSSSVEEISCRINSLTNIDVSSNFNLRKLDCFYNNISIIDVNQSPNLESLQIGSNNISNLNVTQNPNLELLSFPSNSISNIDVTFCPNLSSFVVYENQLTSLDVTQNPDLEFFSCYSNQITSLDVTSNPNLYRLNCNYNQITSLDVSQNGNLFLFYCAFNQLESLSLKNGDHLIQYLNFSNNPTLQFVCADENEIPAVQNFANNYGYTDCVVNSYCSFTPGGTLYTVSGEVKFDSNTNGCDINDDAFPNFSFSITNGSNTGIFTANSSGDYEIPLSDGIHTITPQLENPTYFTISPTSITVDFPTDTSPNIQDFCITPNGIYNDLEVIIIPVEAARPGFDTDYEIIYKNKGTTTLSGAVSLTFDDDFMNVFSTNPTADLQTTGSLSWNYTNLAPFETRSILYTMNLNTPTDANFPLNGDDELTYVATITPTTLDETPGDNMLTFVQTVVNSFDPNDKTCLEGETITEDKVGDFVHYLIRFENTGTASAVNVVVKDEIDAASYDINTLKVLDGSHDYITRINGQKVEFIFENINLPFDDATNDGYVLFKIKTKSTLVENDTFTNKAEIYFDYNAAIITNDEMTLVSAPLSRSEATLDVSIEAYPKPTNDILYIKGEYAIKTIELYTLQGRLLFSKALIGNQTNTNISLKTLSKGLYILKATSKKGVFTDKIIKQ
>NZ_CP019288.1|WP_160128730.1|1618532_1619243_+|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEFRKARKMKRWSAMAKTFTRIGKDIVMAVKDGGPNPETNSRLRAVIQNAKAANMPKDNVERAIKKASDKDTGDYKEVLFEGYGPHGIAILVETATDNNNRTVANVRSSFNKCDGSLGTQGSVEFMFDHTCNFRIPSEGQDAEELELEFIDFGVEEVFEDDDGILLYGPFESFGNIQKELENRELEILSSGFERIPQVTNQLDEEKTADIEKLLEKLEEDEDVQNVYHTMAE
>NZ_CP019288.1|WP_160128729.1|1617291_1618335_+|hypothetical-protein
MKSNYLKISVVFFCVVMFQTSTAQNFKNANDYLGFIGDENQKISKSSWNYTKSVAHSKSPRKIEGDRKRLLKSIERAMLKIKRATPFKGEDAYRKQVLEYMDLRTNILKNDYAKIVDMKEVAEQSYDFMEAYILAQKMADERMQEAQETYENAQKDYAARNNIRLIESETDLSRKMKISNEVFDHKNEVYLVFFKSSIQERFMINALSTSDLSAIQQNANALQMFAEEGLQALDTITLYKEDSSVIEATKKALEFYLNETKNEIPKLLGFFLLNEKFTAIKNSIDKKSSKNRTKKEIDQYNSMVKEMNKAVVDFNKTNEELNKKRTKVINQWNEASAKFLSRHIPKE
>NZ_CP019288.1|WP_160128728.1|1615266_1617288_+|hypothetical-protein
MHKIICFLLLCVVSVTYAQTDSTFCEKSTLVLNMLEKNHYQPKTIDDDFSTYVFTTLFERLDQKRMLYSEADMKALESLKTKLDDYLLTKECDFIQEFTTSYKNQLLLAQKSIELVEKSKLDFSGKDTVFYGSLKDDSQFSDTRKTLEKRWSKKIRIDIIGDYLSLSNPANFNKIKSQLKSKVIAENKCYILDKLQAVGGLESYLETMFLDVICSYFDPHSSYFDPTDNATFMNSIGTETSSIGVWFSKNSDGKIVVSGLQTGSTAWKEKEINAGDLVLSLEANKNTINTTCLSLSNLYDFISDEINQTIAIKVLTQKNINKTIILKKENLKIEANAVNSFILKGELNIGYISLPSFYTNLDYGFGSANDIAKELFKLNAVNIDGLILDLRGNGGGSMKQAIDLAGMFIDKGPLGIYRDQDNKKTIIKDFNRGTLFRKPLVILVDNGSASASEFIAAALRDHNRAIIVGSKTYGKATIQQILPLKNDLGFIKITLEKMYGFKGNSHQAKGIVPDIEFPNLYTGIEDGESGNANFIKNDTVLKNVYFKIPATANHDNLRTQSLARTENNKAIKTIKNINSNLLNYLNSQRKLALSVESLKKDRDNFNAIFEKTDAIEMKHETFEVVNLEDYKEILAYNKNKAKLNSYAIKSIETDHEIEETYRIISDYIKQLAQ
>NZ_CP019288.1|WP_160128727.1|1614354_1615176_+|sugar-nucleotide-binding-protein
MNRILILGASGFIGQAIYKELCSYFDVYGTFYSNKSFAENAHFIRYDLDYDGIDEVVLQVKPTIIISALRGDFAAQIEVHIFLTEYVKTRPCKLIFLSSANVFDAYSSYPSYEYDKTLSESIYGKLKIRIENMLMRLPQKKYAIIRLPMVFGNNSPRILEIKHCLQEKVPIEVFPNLVMNTISDKKLTQQIHYMINRRKNGIFHLGAENLIHHDEFYTEILKSMNVEKPVFKNVYTSNFDRFLAVLPKENKLPKHLATTNEETLDFISGKNTL
>NZ_CP019288.1|WP_160128726.1|1613262_1614345_+|glycine-cleavage-system-aminomethyltransferase-GcvT
MKDTALTEIHKALGAKMVPFAGYNMPVQYEGINAEHEIVRTGVGVFDVSHMGEFVISGPNALALIQKIATNDASKLADGKAQYSCMPNNDGGIVDDLIIYRINSEKYILVVNASNIEKDWNWISSHNDVGAEMKDVSDNYSLLAIQGPKAVEAMQSLTEVDLSNIKYYTFQIAKFAGVENVIVSATGYTGSGGFEIYCKNEDVAEVWERVFEAGADFGIKPIGLAARDTLRLEMGYCLYGNDIDDTTSPIEAGLGWITKFTKDFVNREEIESQKRTGVERKLVAFEIQERGIPRQGYDIVDGNGNKIGIVTSGTMSPSMGIGIGLGYVPTVFTDVGSHIYIQIRKNSVPAKVVKPPFYKK
>NZ_CP019288.1|WP_160128725.1|1611750_1613031_+|threonine-synthase
MNYYSLHHKSPKVSFEEAVIKGLAPDRGIYFPEKITALSKDFIKNIGEYSHEEIAFEAIQQFVGDDIPKEILKDIIKETLSFDFPIVPIEENIGTLELFHGPTMAFKDVGARFMARCLGYFNRDKDESVTVLVATSGDTGGAVANGFLGVKGVDVVILYPSGKVSEVQEKQLTTLGQNITALEVEGVFDDCQEMVKTAFLDSEIERTLTSANSINIARWLPQMFYFFFAYKALHKKHKNLVFSVPSGNFGNICAGIMAQKLGLPIQHFIASTNVNNTVSDYLEAGVYTPKKSIATISNAMDVGNPSNFIRIQELYDNDLETIKKHFSSYSFSDSETKVAMKTLYDQSNYIADPHGAVGYLGLKNHDLKDAYGIFLETAHPVKFLPTVESTLSLKLDIPKQIQEIMHKEKKAHFITDYEGLKKFLME
>NZ_CP019288.1|WP_160128734.1|1626164_1626857_+|T9SS-type-A-sorting-domain-containing-protein
MKKNYTTILIFLVSFSIHAQDDPDLLGQWFLHYIESNGTTTHIPDPAVITINFTNSGNYNSTSGNSSCNTHWSDYVISNSNASIDIINHVRTQILCDTDFFEPIYLGIFGTDTTNFFDYTISTDNQSLTMTDLLGERLIYGRQVLSTEDNEVLSNTLKLYPNPTKEELYISGISTNLKTTYTIYNLVGNIIISDNLLKQDRIDMTSLKAGIYFLKITQKDKTYMKKFIKI
>NZ_CP019288.1|WP_160128735.1|1627045_1627651_-|outer-membrane-beta-barrel-protein
MKKLLLLSFLMCSLTAFSQDIEKDTETEEDKGAYTSTDSDTETKYGFKAGINISNYSATNLDDIQEGLNDSRIGAVFGFFVDMHLAGKFRFQPEFLYSAQGAKEDALRADYLQIPLMIKYDVTNFLNLQFGPQIGVKVHEFEDSFNNFDYAVNAGFGLEVIENVSIEARYSLGLAEMFDEKRAPNLEGKNAVIQVGVTYRL
>NZ_CP019288.1|WP_160131880.1|1627742_1628669_-|rod-shape-determining-protein
MLKIRKFAAIDIGSNAVRLLIANVIEEENRDPKFKKSSLVRVPIRLGQDVFTNGEISKNNVERMINAMKSYRLLMDIHGVEGYMACATSAMREAKNGATVVEKIMKKAGISIDIIDGKREAAIIASTDLHNVIEKECDYLYVDVGGGSTEFTIFSNGKIKISRSFKIGTVRLLNEMVTETDWKDIEKWVKRNTKDLKRLSLIGSGGNINKLYKMSGTTIGEPLSYIYLNAQYQFLQSLTYEERISELGLNPDRADVIIPATRIYLSACKWSGARKIYVPKIGLSDGIIKTLYFETSKKEKSTSNILSF
>NZ_CP019288.1|WP_160128736.1|1628686_1630789_-|polyphosphate-kinase-1
MQQAKNKYINREISWLQFNGRVLQEAADKTVPLIERLRFIGIFSNNLDEFFKVRYATVKRIAQAGKGGRSVLGGEKAKDLLEEITKIVIKQQTESLRILNEVQSALEKENIFIINEKKASPSQSAYIEKYFIENVSPALVTMILDDIDEMPGLKDKAAYLAIRMVMKEQVKNTKKVSRFFKPRVKKIKYALIEIPKSIDRFIVLPSEGDKQYLIILDDLIRDSLGNIFNIFDYESLSAHMIKITRDAELDIDNDLSKSFIQKISTSVKGRKSGEPVRFVYDKTIEKDTFEYLIEKMGIDDIDSLIPGGRYHNRRDYMSFPSLGRQDLLYKSYPPLPIKGLSMEGSIFEKIAQKDYLQYAPYHTFSYVVRFLREAALDPKVTDIKITIYRLAKVSHVASSLINAVKNGKKVTVQIELQARFDEAANIKYAEQLQSEGINLIFGVPGLKVHSKTCVVERLENNKIVRYGFVSTGNVNESTAKIYTDYTLFTADQDILKEIAKVFEFFETNYKVAKYKHLIVSPHYTRNMFYKLISAEIKNAKDGKEAYIKIKVNSLSDYKIIDKLYDASRAGVKIQLIIRGICCLIPGIEGMSENIEAISIVDKFLEHPRMFIFGNNGNPKVYISSADWMTRNIDHRVEVSCPIYDEDIKSELLDTFSIGWSDNVKARVFSSNQDNAYRENQLIKVRSQFATYDYYLQRMSN
>NZ_CP019288.1|WP_160128737.1|1630788_1631274_-|histidine-phosphatase-family-protein
MKTLLIVRHAKSSWEYPVDDKDRTLKLRGIKDAHLVANHIADKINTPDVIYSSIANRALHTCAIFTRCLNYPFEKVVIKESMYDFGGSGLVETIKSCDDAVDTLMVFGHNHAITAVVNTYGSKLFDNVPTSGAVVIQFETDSWKTINDGSTILKVFPKDLK
>NZ_CP019288.1|WP_160128738.1|1631290_1631938_-|pyridoxamine-5'-phosphate-oxidase
MKQDLSDYRKSYEKSELLEENCLENPIEMFQKWFYEVEKSEMVAEVNAMTISTLGFDGFPKSRVVLLKKYTFEGFIFYSNYTSEKGLAIAENPNVCISFFWPAMERQIIIKGKVEKIAENLSDGYFESRPRGSQLGALVSNQSSVIPSRAFIEQKLKKLENEYEGKEILRPENWGGYIVKPQEIEFWQGRANRLHDRMRYQLQTDYSWKIERLAP
>NZ_CP019288.1|WP_160128739.1|1632889_1633045_-|hypothetical-protein
MKKSRTLKLALNKKKVSTLDVNEVKGGQHYSCTPTCTQTALYSRCGNQQCY
>NZ_CP019288.1|WP_160128740.1|1633210_1633369_-|hypothetical-protein
MKKNQIKKLQLTKIDIAKITDMFTSEIKGGTDPVSPPMSEAPDRNGVCYAIK
>NZ_CP019288.1|WP_160128741.1|1633489_1635211_-|helix-turn-helix-domain-containing-protein
MSSTNMYRILRITIGIAMLFCLWKCEKQETLKTISDEDSKRLSRIYNIIDEDLHKAEIDIDTLLIKATRTDNMLLKAELYLQKGVLLTKKGEFNNALDTLVSGVNLIKDIKDLPLKNLFLLRIGNVYALADKSDIAMTYYTKVYEDASAKNTKKELILSSINMAKLMRNAERFEQALEMYKVAYKQTQHIDIKESNVARILMGMGGTYLKLHQPDSAIYYTEKGYKISKSINDKTGESFFHHDFGVAYYLKNEYSKGLQYLDSARIYIEAIKNDERLSETLFNIGRCYYKLQQYETAIGYFDEVTSIINQAEKLDSKGFNPIYLEDMYDLLSKCHLASENYEKSSFYETKRNVLNRIKNKENNEIAKALHDSELNINNKFIKTVLVTNERTLFRYKGISIIIGLLCLTLLYLLFHYRSEAKKNKEIFEKLIQKQDAKANETIQKPKEIIIKDEKVTQVLKRLEKIEAQGYFLESSCSLANMAKKAKTNTTYLTQIIKQYKEKTFYQYLNGLRINYTIDRLKTDTQFRKYAIKHIAFEVGYKSPESFTKHFKKATGIYPSYYIKELAKHNKHNA
>NZ_CP019288.1|WP_160128742.1|1635229_1636138_-|ribonuclease-Z
MKLTILGCYAATPTKHTNPTAQILEIRNHIFLIDCGEGTQVQLRRSKVKFARIKHIFISHLHGDHFYGLIGLISTFMLLGRNTDLHIYGPKGLKELTLLQLKLTKSWTSYTLCFHELESKESELVFEDEKVTVTTIPLDHRVYTNGFLFKEKEKERKLNINAVLNFEIEKCYYQNIKKGKDITLDSGEIISNEKLTFDPPKPKGYAFCSDTVYFPQIIDQIKYVDVLYHEATFLDKHDQLATKTKHTTAKQAAMIAKEANVGQLILGHFSTRYDGFNEFKEEAETVFENVVLADDGKVFEFN

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Crispr_ID: NZ_CP019288_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_5

1702372-1702518

Unclear

Consensus_repeat	Method
TGAGTTCAACTTACAATTTTGCGTTCGCCTTTCAGGCTTCTCAAAATTGAGTT	CRISPRCasFinder

1 spacers

cas3HD

The CRISPR arrays of NZ_CP019288_5

>merge|NZ_CP019288|5|1702372-1702518|CRISPRCasFinder
TGAGTTCAACTTACAATTTTGCGTTCGCCTTTCAGGCTTCTCAAAATTGAGTTATCAATTGTGTTTCAAATTAGGATTCCGTTCTGCAACGGAATGAGTTCAACTTACAATTTTGCGTTCGCCTTTCAGGCTTCTCAAAATTGAGTT

>NZ_CP019288|5|5|1702372-1702518|CRISPRCasFinder
TGAGTTCAACTTACAATTTTGCGTTCGCCTTTCAGGCTTCTCAAAATTGAGTT	ATCAATTGTGTTTCAAATTAGGATTCCGTTCTGCAACGGAA
TGAGTTCAACTTACAATTTTGCGTTCGCCTTTCAGGCTTCTCAAAATTGAGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160128803.1\|1698532_1699120_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379226
NZ_CP019288.1\|WP_160128800.1\|1696299_1696602_+\|DUF3817-domain-containing-protein	unknown	unknown	gnl\|CDD\|378962
NZ_CP019288.1\|WP_160131882.1\|1703052_1703343_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236842
NZ_CP019288.1\|WP_160128813.1\|1710557_1711316_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002
NZ_CP019288.1\|WP_160128797.1\|1693183_1693543_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128807.1\|1702738_1703032_-\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|377476
NZ_CP019288.1\|WP_160128808.1\|1703526_1705221_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP019288.1\|WP_160128802.1\|1698029_1698449_-\|type-II-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|376496
NZ_CP019288.1\|WP_160128814.1\|1711299_1712211_-\|phosphoglyceromutase	unknown	unknown	gnl\|CDD\|366752
NZ_CP019288.1\|WP_160128809.1\|1705233_1707708_+\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_CP019288.1\|WP_160128815.1\|1712215_1713379_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|272922
NZ_CP019288.1\|WP_160128805.1\|1700357_1700528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128804.1\|1699395_1700292_+\|site-specific-tyrosine-recombinase-XerD	unknown	unknown	gnl\|CDD\|274043
NZ_CP019288.1\|WP_160128810.1\|1707980_1708628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128799.1\|1695825_1696245_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128806.1\|1700677_1702249_-\|ribonuclease-Y	cas3HD	cd09641_cas3HD_CAS-I	gnl\|CDD\|237177
NZ_CP019288.1\|WP_160128812.1\|1709462_1710374_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128801.1\|1697302_1698025_-\|diphthine--ammonia-ligase	unknown	unknown	gnl\|CDD\|238952
NZ_CP019288.1\|WP_160128811.1\|1708752_1709286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128798.1\|1694376_1695768_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235798

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160128803.1\|1698532_1699120_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379226	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain. This domain is found in a wide range of outer membrane proteins. This domain assumes a membrane bound beta-barrel fold.	3.58286e-09
NZ_CP019288.1\|WP_160128800.1\|1696299_1696602_+\|DUF3817-domain-containing-protein	gnl\|CDD\|378962	pfam12823, DUF3817, Domain of unknown function (DUF3817). This domain is of unknown function. It is sometimes found adjacent to pfam07690 and pfam03176 which are both transporter domains.	2.21661e-32
NZ_CP019288.1\|WP_160131882.1\|1703052_1703343_-\|hypothetical-protein	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	0.00100881
NZ_CP019288.1\|WP_160128798.1\|1694376_1695768_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235798	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP019288.1\|WP_160128813.1\|1710557_1711316_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	3.00474e-24
NZ_CP019288.1\|WP_160128808.1\|1703526_1705221_+\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	3.53778e-24
NZ_CP019288.1\|WP_160128807.1\|1702738_1703032_-\|cell-division-protein-ZapA	gnl\|CDD\|377476	pfam05164, ZapA, Cell division protein ZapA. ZapA is a cell division protein which interacts with FtsZ. FtsZ is part of a mid-cell cytokinetic structure termed the Z-ring that recruits a hierarchy of fission related proteins early in the bacterial cell cycle. The interaction of FtsZ with ZapA drives its polymerization and promotes FtsZ filament bundling thereby contributing to the spatio-temporal tuning of the Z-ring.	2.10041e-17
NZ_CP019288.1\|WP_160128802.1\|1698029_1698449_-\|type-II-3-dehydroquinate-dehydratase	gnl\|CDD\|376496	pfam01220, DHquinase_II, Dehydroquinase class II.	2.45644e-79
NZ_CP019288.1\|WP_160128814.1\|1711299_1712211_-\|phosphoglyceromutase	gnl\|CDD\|366752	pfam01676, Metalloenzyme, Metalloenzyme superfamily. This family includes phosphopentomutase and 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This family is also related to pfam00245. The alignment contains the most conserved residues that are probably involved in metal binding and catalysis.	1.26013e-11
NZ_CP019288.1\|WP_160128815.1\|1712215_1713379_-\|ACP-S-malonyltransferase	gnl\|CDD\|272922	TIGR00128, Malonyl_CoA-acyl_carrier_protein_transacylase, malonyl CoA-acyl carrier protein transacylase. This enzyme of fatty acid biosynthesis transfers the malonyl moeity from coenzyme A to acyl-carrier protein. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension. [Fatty acid and phospholipid metabolism, Biosynthesis].	6.05581e-114
NZ_CP019288.1\|WP_160128804.1\|1699395_1700292_+\|site-specific-tyrosine-recombinase-XerD	gnl\|CDD\|274043	TIGR02225, Tyrosine_recombinase_XerD, tyrosine recombinase XerD. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerD, one of two closely related chromosomal proteins along with XerC (TIGR02224). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and with homologs of XerD on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerD, as some apparent XerD examples score below the trusted and noise cutoff scores. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	7.0575e-128
NZ_CP019288.1\|WP_160128806.1\|1700677_1702249_-\|ribonuclease-Y	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NZ_CP019288.1\|WP_160128801.1\|1697302_1698025_-\|diphthine--ammonia-ligase	gnl\|CDD\|238952	cd01994, Alpha_ANH_like_IV, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.	4.51247e-61
NZ_CP019288.1\|WP_160128809.1\|1705233_1707708_+\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	4.01914e-13

>NZ_CP019288.1|WP_160128806.1|1700677_1702249_-|ribonuclease-Y
MESTTIIIAIAVGVICLIIGFAIAKVLEKKQASSMIQGAKKQASTLLKDAKSNAENVKKDKILQAKEKFLELKAEHEKFILSKDKKMAEAEKRTRDKESQVSSELSKNKKLNQEIEAKVKDYDYRLDFVEKKKTEVEKLHKSQIEQLEVISGLSADEAKEQLVTSLKEEAKSDAMGYIQAKLEEAKMTAQQDAKKIIINTIQRIGTEEAVENCVSVFNIESDDVKGRIIGREGRNIRALEAATGVEIIVDDTPEAIILSCFDSVRREIARLSLHRLVTDGRIHPARIEEIVKKTRKQIDEEIIEVGKRTVIDLGIHGLHPELIKTVGRMKYRSSYGQNLLQHSREVAKLCGVMASELGLNPKLAKRAGLLHDIGKVPDTETEVPHAILGMQWAEKYGEKPEVCNAIGAHHDEIEMVSLLSPIVQVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFPGVKKAYAIQAGRELRVIVESEKVDDAKAAELSFNISQKIQTDMTYPGQVKITVIRETRAVNIAK
>NZ_CP019288.1|WP_160128805.1|1700357_1700528_-|hypothetical-protein
MLQKILNLTGVDTLTKTQQVDSSGGKVTSLETSFMCYCNSIFVGERSSVKECWKTC
>NZ_CP019288.1|WP_160128804.1|1699395_1700292_+|site-specific-tyrosine-recombinase-XerD
MKWQHLLKDFQIYLKIERGLSENTIINYAHDIEKLMRFLEDNDINLSPLAIDETTIQQFIYEVAKILNARSQTRIISGLKSFFNYLIFEDYRKDNPMELIEAPKIGRKLPDTLALEDIEKLIATIDLSKAEGHRNKAIIETLYGCGLRVSELVGLKLSDLFFDEGFIRVTGKGDKQRFIPISKFTQKHINLYIKGDRIKVKHIPEFSDTVFLNRRGKQLTRVMIFTIIKRLTEKAEIKKNISPHTFRHSFATHLLENGADLRAIQLMLGHESITTTEIYMHVDRSHLAKVMEKYHPRT
>NZ_CP019288.1|WP_160128803.1|1698532_1699120_-|outer-membrane-beta-barrel-protein
MKKIILAAVAIFGFAFTANAQTEQGKWVISGSTSISFATTNLTLEFEGEEISDDAKASIFSFTPSVGYFVINNLAVGLDLSFSSAKNDDGTTDVTTSSFSSILGGTYYFEAGDKFKPFVGLGAGLISTSSGDDDVLKSNGLALRGKGGVAYFVNESLSVDFSVLYLNTNQKNKENNDLVSKNSSLAVGLGFSLFL
>NZ_CP019288.1|WP_160128802.1|1698029_1698449_-|type-II-3-dehydroquinate-dehydratase
MKKMIIINGPNLNLLGKREPEIYGNATFEDYFKALQKQFSNVKLSYYQSNIEGELITKLQEVGFEYDGIILNAGAYTHTSIGIGDAIKAISTPVVEVHISNTFGRETFRHQSYISAHAKGVILGFGMQSYQLAMQSFVS
>NZ_CP019288.1|WP_160128801.1|1697302_1698025_-|diphthine--ammonia-ligase
MKKAYFNWSTGKDSSLALYHVLRQKEYSITQLVTTVNKDYERVSMHGLREELLDTQVERLQIPLKKIYFPAEVSMSSYDETMRKATEELVANGFQYGIFGDIFLEDLRNYREEKLKEVGIIGVFPLWKQDTKALIKEFISLGFKAITVCVNAKLLDESFVGRILDESFLNDLPSTVDPCGENGEFHTFVFDGPLFSSPIDFTIGEKVLKTYSPSKKEEDTCSSDDSTWDTAFWYCDLIPK
>NZ_CP019288.1|WP_160128800.1|1696299_1696602_+|DUF3817-domain-containing-protein
MEPISKETNTLKAFRWIAILEGISYIAFFITMPLKYFMEMPKPNRIVGMTHGVLFLIYVLLAFLVTKEQKWNFKSFGILFLASLIPFATFYVERKYLRIK
>NZ_CP019288.1|WP_160128799.1|1695825_1696245_+|hypothetical-protein
MLNNSVFKKTVTILSLVTALLALFVFITGKQSLASVFQSDETVQETVIDNSSLEEGKKDTTYTSSDKGNVFYRYYNWNSSYWWKTVSICIVVMFIIFFTIRDSKGFWHDIYELIGGILGVISFWSVLLAIISYLWNLIF
>NZ_CP019288.1|WP_160128798.1|1694376_1695768_+|dihydrolipoyl-dehydrogenase
MSTYDIIVLGSGPGGYVTAIRASQLGLKTAVIEKESLGGVCLNWGCIPTKALLKSAQVFEYLKHAEDYGLSVKDADKDFDAVVKRSRGVADGMSKGVQFLMKKNKIDVLEGFGTLKAGKNVDVKGKDGKTTEYSAKHIVIATGARSRELPNLPQDGKKVIGYREAMTLKEQPKKMIVVGSGAIGVEFAYFYNSMGTEVTIVEYLPKIVPVEDDDVSKQLERSFKKSGIKIMTSAEVTSVDISGNGVKATVKTKKGEEVLEADIVLSAVGIKTNIENIGLEAVGIATDRDKILVNDFYQTNIPGYYAIGDVTPGQALAHVASAEGILCVEKIAGMHVEALDYGNIPGCTYCSPEIASVGLTEKQAIEKGYEIKVGNFPFSASGKASASGAKEGFVKVIFDAKYGEWLGCHMIGAGVTDMIAEAVLGRKLETTGHEVLKAVHPHPTMSEAVMEAVAAAYGEVIHL
>NZ_CP019288.1|WP_160128797.1|1693183_1693543_-|hypothetical-protein
MNTPINIHDNDREIYLSTGIYGVKVLGGWSVKLDNFSISLELVGNNTVVTPNSVTFKIQSYVFKKRAKKIFSVDIIQSGNYRVKFKNQESLKIRRSNLFLAQFFEKEIFNEDIEIFIGD
>NZ_CP019288.1|WP_160128807.1|1702738_1703032_-|cell-division-protein-ZapA
MENQLKIKLTIADRVYPLTIAAGQEEGLRKAAKKIESMIKQFEQSYAVRDKQDVLAMCALQFASQVEQKAIDKETNQTALEEKLKALDELLKAQLSS
>NZ_CP019288.1|WP_160131882.1|1703052_1703343_-|hypothetical-protein
MSSTLKIVDSLENSLRKMLHKLEVLEQKNYKLNQELDNSKEQTVRLHEEISQWEEKFNALKIANSMLGSDNNKKEAKLKINTLIRQIDHCITQLAE
>NZ_CP019288.1|WP_160128808.1|1703526_1705221_+|peptidoglycan-DD-metalloendopeptidase-family-protein
MYRLFYIFLCCFSVAFSQNKYPQNDFRSPLDIPIILSGTFGELRSNHFHSGIDIKTKQKEGFEVFAIGDGHVSRIKIQHWGFGKALYITHSNGYTSVYAHLKKLAPKLEAYLKKQQYNKERYEIQLYPTADELMLKKGEVIAYSGNSGSSGGPHLHFEIRDAASKPMNPMLFGIDVKDSHYPTVNGLFAYALSDSAQINSSNKIVQLQLKKDKEENSFIADKVFASGEIGLGVNSYDKQDLAFNKNGIYELESFVNGVKNFSYSFKKFSFGESRYINTLIDYERYKEKKQRVQRCFVTPANKLSIYNDVVNNGILKIEEGKEYTIVLKVKDFKNNTTTITVPIVGKKQNITQKKKETVTNHLITRNAAHTIKEDLVSVYIPKQAFYEDFYFELAKDKKGRYTIHNDKVPAHKNFVITFDVSSYTEKERKQLFIASLDRKKKPSYSSTKKKGTKFTTSTKNLGTYFLAKDTIPPKVRPINFAKDKWISNKKYLKIKVTDDLSGVRSYRGTINGKWVLFEYDAKKGMLIYNFSDLIFEEAKHNLKLIVTDNVGNNTTFTSTFFRKN
>NZ_CP019288.1|WP_160128809.1|1705233_1707708_+|carboxypeptidase-like-regulatory-domain-containing-protein
MKAIQSILFFSFLLFANFIIAQTATVRGVILDTNNKPVEAVNIKTSVGTGTQTNKNGFFMIVIPSDEKVTLTFSHIAHKNITLTVQLKNGEDYEIFPLLSKTAEQIGTVVLDTRNRKAVEGIQTVSAETVRLIPGANPGVENLLMSFPGVNNNNELSTQYSVRGGNYDENLVYVNEIEVYRPFLVRSGQQEGLSFVNTDLVQNVDFSAGGFQAKYGDKLSSVLDITYKKPVRFGGRVNLSLLGGSASIETSSNDSKFSTISGIRYRDNSLLVNSKQTETNFKPRFVDFQTYMTYKFSDKFHLNFLGNIAFNDYDYEPLTRQTNFGTLQDPIALLVFYQGREEDRYRTYFGALKGNYYLNDDVTLKFIASAYHTTEQEHFDILAQYRLGEVNTNIGDQDLGSVEFSEGIGSQLSHGRNDLDALIVNAEHKGSYRINGDENQVDWGIKYTHEDIRDRLIEWEVIDSAGFSIRPPLPQFSNNQPYTPYEGPLEPFQTVRARNNTQIDRVSGFAQWSKQSTLGEHEVWTNIGVRAHSWTVNGDGIESKTQAVFSPRGQIAIKPNWEKDMLFRLSGGFYHQPPFYRELRGANGVVNPNVKAQQSIHVVLGNDYSFKLWDRPFKLTSEAYYKSLSDVNAYTIENVRIRYRADNVADAYAYGLDLRMNGEFVPGTESWVSFGYLKTEENINNRGYISRPTDQRLKFAVLFQDYMPAIPNLKLYLNLTYNTGLPGGSPSYSDPYQFQSKLPDYKRADVGFSYVIVDQERQFDKGSWLHAFKELNVGFEIFNVFDVQNSITNTWVRDVYTKRQFGIPNYLTGRVFNVKLGMRF
>NZ_CP019288.1|WP_160128810.1|1707980_1708628_+|hypothetical-protein
MKKILLFIIVLFVGIQLSNAQKKIYVSDTFEELSEDHKMIAILPFQTTLNLKSDQNTYTAEQLKKLAEREGIAVQQALESYFLNRKRKKKLKIEFQDVNTTNRVLKKAGITLENIDIYTPQELCKILNVDAIISGSLTSRLLLSEEVDTSFNLITFLKGKSDYGKIIIKLSDKKTGKLLWRYEKTINRKSGKNTSAIIAKMMRIASRKFPYEEKR
>NZ_CP019288.1|WP_160128811.1|1708752_1709286_-|hypothetical-protein
MTNQEFKIEILRQHWLKDDGLNDKADLCSHGELFLKIGNEILSDSESDSWCLSATGLYLLRTLKQDYTIGDFDNYLVPCCGHFMIPNDEKDYVLIYGCNNGIDLNIKHENGIVEFTTEKGTKAKIPIDMYVNQVIEFTNQIEQFYGNPKDKEVPNDEFTQNGFRQFWIEWNDLKNSL
>NZ_CP019288.1|WP_160128812.1|1709462_1710374_-|hypothetical-protein
MIEIAGVSWMKKLEKMSDSLITTLIAGGTGLISSLITIYWLKPKIDRKFHIFQLEENYKHEQAKKIKEIIGQYKSQLLNSAEHLHSRLKNYSKNCSENWLEVNGDYHTNHYYIDTMVYRFLNFFAYIKLVEDNLEYLDTTNSENDDMEMIRYFRIFADVISDVDLFKGSDYDANNQSDHIFRNRFEQYYECLIQEKKIISFNLFEDRKDELIEYIQPIYMFFDGMNKTEPRYRLERLKCFHCILISFLNHFGYDFQETKLTKVQKLKKLLGPLKFESGLKIIIKKYKLKGSKQLTELVIDNYK
>NZ_CP019288.1|WP_160128813.1|1710557_1711316_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MLVRNKKFNILSKNLNQAYIEQPTTNNQQPTTSNQQPTAVIDIFFTSIKNPLKENLYEEYLYLLPKDLRERNARFMRWKDRHAHLFGKLLLIEALKKYNIENNIWDLIVYSKHKRPYFTLDEYDFNISHSGDYVLCAIGKNIKLGIDVEENRERNFDDFQNLMTTAQWEEIHSSKTPIKTFYKYWTIKESVIKADGRGFYIPLEELEVENNTVQVDDKRWFINNFALAEGYSTALATNKEVSFKMHELDFYI
>NZ_CP019288.1|WP_160128814.1|1711299_1712211_-|phosphoglyceromutase
MKNKLIFIFLDGIGLGKDEATNPFTQVPMPTLFSLVGENLTHSTHVEKQGFLLKGIDACLGVDGVPQSATGQSSLFTGYNAQAFLGHHLMAYPNDELIGLINKRSIFKYAEEHNIKSIFANSYTDGFFKAFDRNSTNYSVTTRCVLAGKSRFNTLDDLIAGNAVHWDITNVTLQDLPNNRVPLIAPFKAGENLKNITNEYDLILFECFLPDLIGHRKNMEKSVEFLEILDEFLRGILHDKSENIHIVISSDHGNMEDLSYGGHSKNEVPLIVIGKEAQQFSEVKGIDEIFDTMFSKLFNVGSK
>NZ_CP019288.1|WP_160128815.1|1712215_1713379_-|ACP-S-malonyltransferase
MKKTYLFPGQGSQRKGMGGELFDEFPALVKKADKILGYSIKELCLENPDQKLNQTQYTQPALYVVNALSYEKKLKDGEKEPDFVAGHSLGEYNALLAAGVFSFESGLRLVKKRGELMSEAKNGGMAAILNSSEEQIQEILKDAKLSTIDIANLNASSQIVISGLREDINSAQPFFEKADVMFIPLNTSGAFHSRYMKEAADEFGKFIKKKRFNKSKIDVIANVTGKPYDQSNTSQHLVDQLFNSVRWSESMTYLLQQEDMEFEELGVGDVLTKLTGYIKKDFAKTQGQSVEKKEVATPTASNETKEPAKKEEPKTQVAKGNISSGATKLVAQWNETNPIGTKVISDFYENELETRSQATILFGHRAAVYMKGYNGYFDLREVKLAQK

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Crispr_ID: NZ_CP019288_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_6

2649191-2649328

Orphan

Consensus_repeat	Method
ACTTTTAACTTAAGTCAATTCGGTTGTTCGTCTTTTTGTTGATTTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_6

>merge|NZ_CP019288|6|2649191-2649328|CRISPRCasFinder
ACTTTTAACTTAAGTCAATTCGGTTGTTCGTCTTTTTGTTGATTTGTTGATTTTCACTCCTAACTAATGACTTTTCACTTTTAACTTTTCACTTTTAACTTAAGTCAATTCGGTTGTTCTTCTTTTTGTTGATTTGTT

>NZ_CP019288|6|6|2649191-2649328|CRISPRCasFinder
ACTTTTAACTTAAGTCAATTCGGTTGTTCGTCTTTTTGTTGATTTGTT	GATTTTCACTCCTAACTAATGACTTTTCACTTTTAACTTTTC
ACTTTTAACTTAAGTCAATTCGGTTGTTCTTCTTTTTGTTGATTTGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160129518.1\|2639684_2641802_-\|MORN-motif-precursor	unknown	unknown	gnl\|CDD\|215619
NZ_CP019288.1\|WP_160129522.1\|2643773_2644325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129532.1\|2655793_2656882_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213362
NZ_CP019288.1\|WP_160129520.1\|2642629_2643262_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP019288.1\|WP_160129534.1\|2657707_2658625_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NZ_CP019288.1\|WP_160129529.1\|2650961_2654183_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP019288.1\|WP_160129519.1\|2641812_2642511_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129533.1\|2656947_2657484_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|223740
NZ_CP019288.1\|WP_160129523.1\|2644600_2644930_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129527.1\|2648176_2649121_-\|methyltransferase-domain-containing-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129526.1\|2646834_2648175_-\|sodium:solute-symporter	unknown	unknown	gnl\|CDD\|271357
NZ_CP019288.1\|WP_160129536.1\|2659455_2659617_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP019288.1\|WP_160129530.1\|2654229_2654844_-\|DUF2064-domain-containing-protein	unknown	unknown	gnl\|CDD\|275102
NZ_CP019288.1\|WP_160129524.1\|2644880_2645870_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129528.1\|2649518_2650949_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	unknown	unknown	gnl\|CDD\|378943
NZ_CP019288.1\|WP_160129525.1\|2646028_2646850_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|378975
NZ_CP019288.1\|WP_160129535.1\|2658763_2659306_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129521.1\|2643406_2643763_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129537.1\|2659921_2660551_+\|SOS-response-associated-peptidase-family-protein	unknown	unknown	gnl\|CDD\|376837
NZ_CP019288.1\|WP_160129531.1\|2655148_2655619_+\|DUF1572-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160129518.1\|2639684_2641802_-\|MORN-motif-precursor	gnl\|CDD\|215619	PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional.	9.63421e-17
NZ_CP019288.1\|WP_160129536.1\|2659455_2659617_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	4.65685e-07
NZ_CP019288.1\|WP_160129532.1\|2655793_2656882_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	5.12053e-161
NZ_CP019288.1\|WP_160129534.1\|2657707_2658625_-\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	2.62392e-38
NZ_CP019288.1\|WP_160129529.1\|2650961_2654183_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	4.70891e-180
NZ_CP019288.1\|WP_160129520.1\|2642629_2643262_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.35415e-14
NZ_CP019288.1\|WP_160129533.1\|2656947_2657484_-\|mechanosensitive-ion-channel	gnl\|CDD\|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	1.6326e-06
NZ_CP019288.1\|WP_160129526.1\|2646834_2648175_-\|sodium:solute-symporter	gnl\|CDD\|271357	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain. This family represents the solute-binding domain of SLC5 proteins (also called the sodium/glucose cotransporter family or solute sodium symporter family) that co-transport Na+ with sugars, amino acids, inorganic ions or vitamins. Family members include: the human glucose (SGLT1, 2, 4, 5), chiro-inositol (SGLT5), myo-inositol (SMIT), choline (CHT), iodide (NIS), multivitamin (SMVT), and monocarboxylate (SMCT) cotransporters, as well as Vibrio parahaemolyticus glucose/galactose (vSGLT), and Escherichia coli proline (PutP) and pantothenate (PutF) cotransporters. Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). One member of this family, human SGLT3, has been characterized as a glucose sensor and not a transporter. Members of this family are important in human physiology and disease.	4.95532e-16
NZ_CP019288.1\|WP_160129530.1\|2654229_2654844_-\|DUF2064-domain-containing-protein	gnl\|CDD\|275102	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated. Members of this protein family show strongly correlated phylogenetic distribution, and in most cases co-clustering, with an unusual radical SAM enzyme (TIGR04167) whose C-terminal pfam12345 domain often contains a selenocysteine residue. Other members of the conserved gene neighborhood include another putative glycosyltransferase, an alkylhydroperoxidase family protein (TIGR04169), and a phosphoesterase family protein (TIGR04168). The cassette is likely to be biosynthetic but its exact function is unknown. [Unknown function, Enzymes of unknown specificity].	4.25837e-21
NZ_CP019288.1\|WP_160129528.1\|2649518_2650949_-\|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein	gnl\|CDD\|378943	pfam12771, SusD-like_2, Starch-binding associating with outer membrane. SusD is a secreted starch-binding protein with an N-terminal lipid tail that allows it to associate with the outer membrane.	1.39022e-92
NZ_CP019288.1\|WP_160129525.1\|2646028_2646850_-\|metallophosphoesterase-family-protein	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	9.21901e-07
NZ_CP019288.1\|WP_160129537.1\|2659921_2660551_+\|SOS-response-associated-peptidase-family-protein	gnl\|CDD\|376837	pfam02586, SRAP, SOS response associated peptidase (SRAP). The SRAP family functions as a DNA-associated autoproteolytic switch that recruits diverse repair enzymes onto DNA damage. We propose that the human protein Q96FZ2:UniProtKB, the eukaryotic member of the SRAP family, which has been recently shown to bind specifically to DNA with 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxycytosine, is a sensor for these oxidized bases generated by the TET (tetrahedral aminopeptidase of the M42 family) enzymes from methylcytosine. Hence, its autoproteolytic activity might help it act as a switch that recruits DNA repair enzymes to remove these oxidized methylcytosine species as part of the DNA demethylation pathway downstream of the TET enzymes.	7.30782e-13

>NZ_CP019288.1|WP_160129527.1|2648176_2649121_-|methyltransferase-domain-containing-protein
MNWKLKASLQKLLHFTKIGDTLNHIPATLKKDYHKNVCLYQAYECLRKFEEIEIETESRNPKKALEIGTGYSLISSVILHLLGFDKVVTVDISKDVSIKTFRKQIQHIDSGDFLERIALQSTFSLTEIKEKVQQLQSFQTLEEVFDFCNIVYIPNYTLSDIEKESTSFDYICSQVVFEHISPVFLVQLFAKMKSWLPENGVAVHTINFIDHFANPGFFQDKNISEFNFLKYSDETWKYWAGNDIAYTNRLSYVYYLELCETNNLTVIDFKGENYRIHNPLSVSEIHSDIIKKYKKLQNVEDLCKYQRGTLIFKH
>NZ_CP019288.1|WP_160129526.1|2646834_2648175_-|sodium:solute-symporter
MESVAIWQWTLIIVTSLLFFWFSPLAKTANQFFKATQNKRQPSAWMLTGSLIVSWIFAKSITNAANLGASFGLVGGVAYAAYYVSFAVAGIVIYQLRTKGGFTSIHHFLKTKFGHAAILLFSVLIGIRLFNEVWSNTMVIGSYFGVAGSTSYYMSIIVFTGLTLAYALKGGLSSSIFTDVIQMVLFSILLCVILWNIFSVEDFSVKEVTSSGDWTFALGGNLLLAAVLQSFSYPFHDPVLTDRGFISSPKSTLKSFLWASVLGAICIVLFSIVGIFAQQQGLQGNDAAVMVSKSFGVILLLVINFIMITSAASTLDSTFSSSAKLFAIDLKLGENIRFGRIVMILVAVLGTIPVFLNAEILSATTISGTMVIGLTPVFLFWKQKATKVSYFLSVGCGLFFGFLLVFDVFPEVFIFTTGKYASLLWVNIWGILSCCVLYMLPIWIKK
>NZ_CP019288.1|WP_160129525.1|2646028_2646850_-|metallophosphoesterase-family-protein
MDKKINNIKQLSGKVLLFGGVYSNLQALEALIAVAKREHISPENCICTGDIVGYCGQPEETVQLFKTWKAKSIVGNVEEQLASGSVDCGCDFTQGSRCDNFSKEWYPLAQSKLSKSSIAFIQTLPDYIKFQYANKYVCVVHGSYEYISEFVFKSTNWSLKQTSFDNSESDVIIAGHCGLPFLDEKNNQLWINPGVIGMPANDGLQTVWYAILDDSDGFSVKHYRLAYNHEKAIEIMLANGFPASYAKTLQTGLWDNMEILPEREKGECGKDIL
>NZ_CP019288.1|WP_160129524.1|2644880_2645870_-|hypothetical-protein
MRKIATYASIGSFAFVFLNALYFFYNYYNRLDEIPADDDIIAKFFLFAMLLNFGLVIYSISLTSRHEKIIADKQEFVDREKELKKIIDYYKQSLNIHSTTNHNISHSLRQLLNDCYEAIVKTEFERYLEINAKFFQFLQFLTTNVKENFDVLTKNACSVYVLLVEEDEQNDDNYLVNTLFRDPISYPKRDLIDKDFDNFYYANQFFPLTQILDEGNNVNHFVCDDCITHKSFYDRIQDWHDYYKSMLCVPIRKYIGIEEEDGERVDYYRTIGFLVVDNFEGNLDNKIAIEQLKGYADQLYHLFIIFTHLEKLFYETQNDKLQGTSEQSN
>NZ_CP019288.1|WP_160129523.1|2644600_2644930_-|hypothetical-protein
MKHKTISFREQANKVIERRTSNSTGKISDACMQVTMPKSADLDYINPLRVKMTLKGLSEMSDIDKMGVVVGKVRTHSKSLNNRRKMVRIIRSGNTVSERIIFANNVYRK
>NZ_CP019288.1|WP_160129522.1|2643773_2644325_+|hypothetical-protein
MKSNSTYIIAFLSLLLFVNCTEKEKKKTLDTTNTEIETETESMLQDSIADISLEELEADKKSIPHHYICYTNDDKSSMQLSIAFNATSNALFVKYEGQEDSIPLENVKEDFQSDGAYPTITQFYDEMLNGKKNGTYELTHSGNWDYVKYRSLEGDKVVKFTINHDATIVDGEYRKTPCFGDSE
>NZ_CP019288.1|WP_160129521.1|2643406_2643763_+|hypothetical-protein
MEIFFIIILGFTAVALFDAIGAVLSRILNFNYAMLMIGSIIIYATVAVFTAKYGGIIIGIIAGFLMGVFDVTVGLKISEKLKANIPDKSLTFSIDIKTVLAVSVFAAIVGGIAIVLIL
>NZ_CP019288.1|WP_160129520.1|2642629_2643262_-|tetratricopeptide-repeat-protein
MKKIYIFFLLAAFSFANAQTTKTLLDSALVKKEQLKFLEGIKLCEQAIALDSTLTEAYFYKAGFHTALINKRNAGEDYKNYKVAIADYDKVIELNPKHAEAFFFRGGAHDAMGFIDEALADYLNSTAIDENQPKVYNSIGVCYAKKGKIDLALSYFEKATEFDPLYGKAYSNKGNVYDMKRDLKNACKNWKKALELGYTGNQRRYDTKCK
>NZ_CP019288.1|WP_160129519.1|2641812_2642511_-|hypothetical-protein
MKKIITLLSVIALLASCANYGEKKMFNGTEVYYKDGITEAQADKLGESLVSSGFADGNGKSVQFVKEGENYIFKMVIKEESIDDKSLESVFNIFPKELSEYMGFPVDLHLCDDSFNTLRVHKLEDAQKTIMAKATEVRYTKNVTLDEAEKLKDFLIEFGFSDNENRKTVALDKEGTAYIFKMVLDKSRMEDKNTIGLLTMFKDELSKNVFDNQPVRVHMCDELMNTIRVIEK
>NZ_CP019288.1|WP_160129518.1|2639684_2641802_-|MORN-motif-precursor
MKNTVLLLLFCFVYQLTIAQKTDMVNAPRNPIGFKHKKEHFFLRGDVYASAGKIFDRDGNLLYNYGTWYYYDASGKIIGNNYSDTIKYDANGNVIEFQYNSGSTNNYTFNSKNLLSHEKNTYGEDKTYTYDSQDRLIKTIVNRKGVFNQQHDIIYSKSSDTLVVSVQYINADRQPGFSGAYYYLDGHLVKEKLVSATYSYIVDKDSKGNKVDFYTANDPNAKHFETYHRYYSDANKPTKLEYGYYIPGSIKTAKKVPAAYINGVRATDITISKGIKPDEKILYDGLTQTYYSIPNVVEDNHMSETRITATDVLSKGTPHISYAYDGKFINYVDGENKVKAREFCFIGSHMVDYRIEKNTGRTYIIYDYKSATEKAVKEMNLFTADTTAIMYSRELQKDNFFIVVKGQHIDYKKARFEYLTSGDPVIFIDDKPLYILTGFKAAKDEEVLEGRKYKGELDNQQEIPVVKTTTETVVKTTEKASADYACVKGDCQEGWGRVTVNNIITDATFKDGAINGVAYISYPNGGYYHGQYVNNRRHGVGYYKWENGNVYIGGWKDGLQHGLGYSMDKENKITSAGLFENGKFISESATDYLAGKTSGNCIGNCVDGFGKYTYKNGDMYWGFFKNSNRYGVGTYLWKNKSVYTGAYILGGKRDGYGIYTYVDRSVFKGIYVDDRIDGLGVMKYNSSGDITQGVFNSSGAKVKDY
>NZ_CP019288.1|WP_160129528.1|2649518_2650949_-|SusD/RagB-family-nutrient-binding-outer-membrane-lipoprotein
MKKYIILTIVAFTIFSCTQDFEEINTNPNAPVDVQPSLLLRQVIYNYGEEMSYEGFVAGNLLAQHLTALDFNLFDRHALNSPQLGGNPWGIFYTNLRDNEIILNKSRSAETFAVYEGPALIFKAYMTMALTDLFGDVPYSEAFQGTNGIVNPKYDLQEEIYLAQDGILDNLEQGILAIQNYSGSISLEGDILYNGDLTNWIRFANSLRIKALIRISDKENVSSSLQAIVADGNYITTNAQNAVFNFTDGEPNNFRMARLRAGDFNNFVMSETIENVLTDLNDPRINVLFRPFGNTTGNEYNGLINGIDASQTTISLANYSLAGMFFRENTANLDANYMTSWETNLLLAEAATKGFITEDAQTFYENGVTQAFEYWQTELPVNYLTTTAAFDTANALEQIITQKWIANTINGYEGWIEYRRTGFPNLPAVSASLNNELIPVRMPYPAEEATLNTINYNQAAQATNGNSINVRVWWNE
>NZ_CP019288.1|WP_160129529.1|2650961_2654183_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MKQLLLGLTFFIMSFGYAQQKITGTVTSKSDGTTIPFVNVLIKNTLQGTTTDIDGNYSITSRNNNDIFIFSALGYTTQEVSVNNQAIINIVLEEGTTALNEIVITALNRKRETKELGYAIQSLEGEGIAEVKSVNFLDNLSGKLAGVTITQGGATGVGSSSKIVIRGEQSFTNNNPLFIVDGTPINNNTVFNVTNEAAAGFQEVDFGNGAMEVNPDDIASVSVLKGPSAAALYGTRASNGVIIINTKDGSKSKGLGVSINSSLYIDSAFQLPKFQNEYGQGNSGQFEYVDGLGGGINDNITYSWGPRLDQGTLIPQFDSPVTLADGTIVRGGDTSLYNGLPITPTAFVSNPDNLKNFYQTGVTTINNVAVSSGFDKGNYRVSFTDLRSESIIPGVNLDRQTVAARLGFSPTEKTKITTNINYVYSSSDNRPSNGYGSENVNYSLVAWGPRSLNIDNLRNYWQPGLEGIQQYAFNYTFFDNPYFILEENRNSFERDRVFGNIALRQELTKNLRLMIRTGLDYSSEKRRFLRNFSTNRFRNGAYAEHDVTYREINTDFLVNYTNKAGDFNFDVSLGGNRLSQKASTSQSQTTQLAQPGIFSLNNAASPIESFGFTTEKRINSFYGLFKVGYKDFLYVDITGRNDWSSALATPFSAENTSFFYPSISSSFILSNVVELPKVISFAKLRASVAQVGNDTNPFQTSGTFISQTAVNSQPTFSNQDFIPNPNLKPERTTSYEFGADFRFFKDRLNLDVTYYNALTKDQILSIPIPISSGYTQQVINGGEVRSKGVEIVLSAIPIKNENFEWNSIVNFSTNRATVASLPQQDGRITLAYSRVYNNPDQTVWFQVEEGGRIGDFYGTGYLRNENGDFVLTPEGRFIADNNLKKLGNSNPDFIIGFSNQFRYKNWDLSFLLDWRQGGELVSRTLSLAAVGGQLEETSFRPEAGIVADGVINTGTTDNPIYVQNTTAISAESYYRQFYDRNHEENNVYDASYLKMREFSIGYSFKIKENSIGFLKSDADIKVSLLGRNLFAISEIPHFDPEQLAVQGQGIVSGVEDLSYATTRSFGLKLNVNF
>NZ_CP019288.1|WP_160129530.1|2654229_2654844_-|DUF2064-domain-containing-protein
MIPNGEKLFSYFNAQILEKVQKTGLPYFIYSEKEQHGTTFGARFTNAIAAVFAKGFTQLISVGNDTPSLEATDILKTHHDLQQNKVVIGPATDGGIYLLGISKEHFNATTFQELPWQTRHLRTAFQQSLLQEGLQIKLQRTLKDVDAQQDVSWFYKRLQYVSETFKNILLNIIQKIQSVNSFLTFDIATFYTKSLFNKGSPSLS
>NZ_CP019288.1|WP_160129531.1|2655148_2655619_+|DUF1572-domain-containing-protein
MKLASQIAKHFKEVHFGENWTGSSFKEIMEGVTFEQATTKVQDLNTILTLVFHANYYVAAVLKVFQGEALNAKDELSFDHPQLNSEAEWQAFLAQVWKDAEAFADFVELLPDDCFDKDFTDKKYGNYYRNIHGIIEHTHYHIGQISLLKKMLNFEF
>NZ_CP019288.1|WP_160129532.1|2655793_2656882_-|magnesium/cobalt-transporter-CorA
MNISSKKEKRRKKENASRSLGRAPGELVYLGDKENLETILEVHEYTSEEYNTHQTNQIQNILNVKGNNRVTWINVNGLNNAQDITKIGRYFKLHPLILEDIVNTNQRPKIDEYENYIFVVLKMLYHNKENELLTEHISIIIGHDYVLTFQETEEDIFDPIRRRFKNQKSRLRSSSADYLAFSLMDAIIDNYSVVIEMFGAKVEQTEDELFLENSREGISRDIQYLKQDLLRLRRNVFPSREVISRLVKSQSELITIKTYNYLKDLQDHILQINDNIDLYREMVWGLMDMHMTTMSNKMNGIMKVLTIISTIFIPLTFIVGVYGMNFEHMPELHSENGYFVLWGIMIALFLALLIFFRRKKWL
>NZ_CP019288.1|WP_160129533.1|2656947_2657484_-|mechanosensitive-ion-channel
MIVPKDELLHTLLLIVIMIVTSFIIKKAIRKFSFVRAIEVNRRKVIFNICYFVIYLISGFFLALIWGVKFEDFAIFISSVLAVLGVGFFAQWSILSNITASFILFFYHPIRIGNRIKIIDKDYEWTGSVKNITAFYFFIETDEGQHISIPNALVMQKAIEILAKEEPIEKEEKELFEE
>NZ_CP019288.1|WP_160129534.1|2657707_2658625_-|mechanosensitive-ion-channel
MAIIQQSTTEDIQSTAGIVIDKLQSWWVAFVENLPNLGVALLVLILSYFLSRLVFKTTLKLVVGRVRQRSVAKLIAKVIAVIVVLLGLFLALSVLNLGQSISGLLTGAGISGVVIGLALQGTLSNTISGIVLSFRKNIRLGNWVETTGFSGEVMDIALNYLVLKEADNNIVIIPNKTILENPIKNFSLTTRMRVMIECGVGYESDLEQVEQITKNVIADSFDQIESTENVEFYYTEFGGSSINFLCRFWIDAENSLEQLKAKSKGIKKIRQAFAKEGINIPFPIRTLQFDDQTLHVSKAEKTEEA
>NZ_CP019288.1|WP_160129535.1|2658763_2659306_-|hypothetical-protein
MKKLIIVAILLTGTFAFAQKDKIVTTEVKKTTTVKGDEVINTKVKVITEKTQKVKFDKNQKHQLNQDRVVAPIAVTKTFMIDNDKDPFYDKVTKVKYYNMNNRKYAFSAEGNSLNMSYTENDKEVNIGKAVRSKYNNYYVISSKEMNGVGYFTKDNDFVLEYYNPKTDDTEFVIFEDLKF
>NZ_CP019288.1|WP_160129536.1|2659455_2659617_-|DUF1328-domain-containing-protein
MLRWTITFIVIALIAGVLGFGGIAGASAGIAKILFFVFLVLFVITLITGRKKI
>NZ_CP019288.1|WP_160129537.1|2659921_2660551_+|SOS-response-associated-peptidase-family-protein
MKYKLSNIASRTSLELTFRLPLMYPNTYKPNLIIDGLKEQSIPIITMHDPKHITKGIWGILPQDFEGDWKKFQKLKTTLHTNRNDIANNILYNEALEKRRCLILVTGFYMYQLDENEIKTFLVEKENAAPFSIAGIYNILEDGFITCSVINTEINDLLSSEKNLYDSMPLEIPQLFKNTWLSEQTAFNDIKHIISKPYLTKFKIQRIAS

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Crispr_ID: NZ_CP019288_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_7

2715410-2715489

Orphan

Consensus_repeat	Method
CACTGATAACCGCAGATGTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_7

>merge|NZ_CP019288|7|2715410-2715489|CRISPRCasFinder
CACTGATAACCGCAGATGTTTTTTATAGTGCGTTTACTATTTGTTTCCCGCAGATTGCGCTGATAACCGCAGATGTTTTT

>NZ_CP019288|7|7|2715410-2715489|CRISPRCasFinder
CACTGATAACCGCAGATGTTTTT	TATAGTGCGTTTACTATTTGTTTCCCGCAGATTG
CGCTGATAACCGCAGATGTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160129601.1\|2718367_2718853_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129590.1\|2708563_2709064_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|365823
NZ_CP019288.1\|WP_160129596.1\|2714238_2715345_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP019288.1\|WP_160129603.1\|2720110_2721361_-\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP019288.1\|WP_160129604.1\|2721362_2721977_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP019288.1\|WP_160129589.1\|2707983_2708556_-\|fasciclin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225214
NZ_CP019288.1\|WP_160129597.1\|2715665_2716052_-\|GxxExxY-protein	unknown	unknown	gnl\|CDD\|372581
NZ_CP019288.1\|WP_160129588.1\|2705996_2707955_-\|Sec-dependent-nitrous-oxide-reductase	unknown	unknown	gnl\|CDD\|275078
NZ_CP019288.1\|WP_160129591.1\|2709404_2710253_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP019288.1\|WP_160129594.1\|2712107_2712854_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|224527
NZ_CP019288.1\|WP_160129592.1\|2710267_2711161_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129605.1\|2723209_2725621_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP019288.1\|WP_160129600.1\|2717890_2718349_-\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP019288.1\|WP_160129598.1\|2716161_2716890_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019288.1\|WP_160129606.1\|2725694_2725862_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129595.1\|2712865_2713987_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP019288.1\|WP_160129602.1\|2719209_2720100_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP019288.1\|WP_160129599.1\|2716982_2717885_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP019288.1\|WP_160129587.1\|2705273_2705888_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129593.1\|2711692_2712103_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160129602.1\|2719209_2720100_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	7.79533e-19
NZ_CP019288.1\|WP_160129590.1\|2708563_2709064_-\|c-type-cytochrome	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	2.42916e-15
NZ_CP019288.1\|WP_160129596.1\|2714238_2715345_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	5.51315e-34
NZ_CP019288.1\|WP_160129603.1\|2720110_2721361_-\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	2.39738e-14
NZ_CP019288.1\|WP_160129604.1\|2721362_2721977_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.40816e-15
NZ_CP019288.1\|WP_160129589.1\|2707983_2708556_-\|fasciclin-domain-containing-protein	gnl\|CDD\|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	1.32294e-38
NZ_CP019288.1\|WP_160129597.1\|2715665_2716052_-\|GxxExxY-protein	gnl\|CDD\|372581	pfam13366, PDDEXK_3, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	1.36549e-56
NZ_CP019288.1\|WP_160129588.1\|2705996_2707955_-\|Sec-dependent-nitrous-oxide-reductase	gnl\|CDD\|275078	TIGR04246, nitrous_NosZ_Gp, nitrous-oxide reductase, Sec-dependent. This model represents the nitrous-oxide reductase protein NosZ as characterized in Geobacillus thermodenitrificans. In contrast to the related form in Pseudomonas stutzeri, this version lacks a recognizable twin-arginine translocation (TAT) signal at the N-terminus. Consequently, its accessory protein may differ. Some members of this family have an additional cytochrome c-like domain at the C-terminus.	0
NZ_CP019288.1\|WP_160129591.1\|2709404_2710253_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	4.2597e-09
NZ_CP019288.1\|WP_160129594.1\|2712107_2712854_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	1.42912e-53
NZ_CP019288.1\|WP_160129605.1\|2723209_2725621_+\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.63913e-96
NZ_CP019288.1\|WP_160129600.1\|2717890_2718349_-\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	1.41572e-13
NZ_CP019288.1\|WP_160129598.1\|2716161_2716890_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.11759e-97
NZ_CP019288.1\|WP_160129595.1\|2712865_2713987_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	2.23562e-33
NZ_CP019288.1\|WP_160129599.1\|2716982_2717885_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.37836e-93

>NZ_CP019288.1|WP_160129596.1|2714238_2715345_-|ABC-transporter-permease
MKRFIGFIKKEFYHIFRDRRSLFILFGMPIAQILLFGFAITNEINNVDIAILDHSKDATTKEIINKISASKYFSINQFVDKESDIETIFKKGKVKAVLNFEKDFSKNLIKEHKATIQIITDATDPNTANTISNYVNAILQQYQKELNKDITIAYQIVPATRMVYNPELKSVYMFVPGVMTIILMLVSAMMTSISITREKELGTMEILLVSPLKPIQVIVGKVFPYIFLSIINAIVIVMLSIFIFNMPVQGSLFLLGLESILFIISALALGILISTISATQQTAMMISLMGLMLPVILLSGFIFPISSMPVPLQYISNIIPAKWFIIIIKGIMLKGVGLQFIWKETLILLGMTVFFIGLSVKKYKIRLE
>NZ_CP019288.1|WP_160129595.1|2712865_2713987_-|ABC-transporter-permease
MKTIIYIIQKEFKQIFRNKGMLPIIFVLPLLQLVILSNAATFEVKNIKFGYIDNDHTSTSRALIEKFNASTYFDVLTDFPSEKLASAAMLKGEVDVVVAVPHYFERDLQKEKHTNLGVTINAIDGAAAGVENVYVTQIVQRFNQHLKVDLIQISDKQIQPISIETIPLFWYNETLNYKTFMVPGILVLLVTMITLFLSGMNIVREKEIGTLEQINVTPIKKSQFIIGKLFPFWVIGMGLLTVGLILARLIFNVPMLGSLPLMYFYTSIYILVVLGIGLFISNFTDTQQQAMFIAWFFIVIFILMSGLFTPIESMPKWAQILTEFNPIKYFVEVMRMVMLKGSGFMDILPQLLKTLVYAIVMNGLAVWSYKKTT
>NZ_CP019288.1|WP_160129594.1|2712107_2712854_-|TIGR00730-family-Rossman-fold-protein
MKTDKKIKLSKDESLFVRGPLSRFKELSFAFKVFFNFIKAFRKMHFIGPCVTVFGSARFTKDSDHYKNAEKIGAALAKTGFTVMTGGGPGIMEAANKGAFEAGGNSVGCNIILPFEQKPNPYLHKWINIPYFFLRKVILVKYSYAFVVMPGGIGTLDELFEALTLIQTKVIQDFPVVIFDSKYHKELCEHIQLMAKNESISPKDMKLLFVTDSVEDLITHIESNSIKKFGLVKKQVKPKWWLGESTNK
>NZ_CP019288.1|WP_160129593.1|2711692_2712103_-|hypothetical-protein
MKARKIINTVSAITLALFALLTLYLSSAVIFDWFGIRAKEGNYVLFIVWSNFICSILYLFAVYGFIKRAKWTFWVLLTALVILVVAFVTLKFYINNGGIHEAKTIKAMIFRISLTFTYTLLTYFTIKKTKIHELTK
>NZ_CP019288.1|WP_160129592.1|2710267_2711161_-|hypothetical-protein
MKTKTYILILFLCSTFIVFSQKDVDTIPQLDLYKIALINQTDSYITFPTDIGNIESLMFEANVNPSFVIRKRKDSKLMALLTPQITIRMYNEDSYPVRTPSYIPQVSFYYLANKEENLNYLVLFGKIAHYSNGQDGGFYNDENSINLQSGNFATNFIEFGFLKTAYSNRLKAIKTIKSSVEFHPKSWMLQEMKGRYSGLRWHNSFTSFKFPLKNDEMKRANFSLKAETTLMLDNYNNLDVFDLDRFNASLTFYYHPKFLEDIGLFVQFYHGMDYYNIYFEHQLSIIRFGIMTEILRF
>NZ_CP019288.1|WP_160129591.1|2709404_2710253_-|restriction-endonuclease
MEKQVYIKKSNDEMELFSFEKLKQSLLSTGACKEVVETIVKRIQPDIFDGISSNEIYKKAFSLLKKHNKVSASRYSLKRALFDLGPTGYPFEKLVGALLKEKGYKTKVSVILNGECVTHEIDVLAEKDGNVYAIECKFHSDVKATSNVKVPLYINSRFLDIQKQWNTNSNNKTHLKQGWLVTNTRFTEDAVNYAKCVGLTLLSWDYPKNNGLKANIDTLALYPVTTLTTLNKKEKHQLIENDVVLVKELMNATKKMKNIGISEIRIQRVLDEVKKLCQNNSN
>NZ_CP019288.1|WP_160129590.1|2708563_2709064_-|c-type-cytochrome
MTKIIKLTFLLAFGLLISCGGKEEKKGAIKIGQTKTKVKTETPKSDVVPASKRITLENKGVGKVKSLTLDATIDDAMAERGAALFKTNCTACHKTNKRFIGPNPTGIMERRSPEWIMNMILDPKLMTEEDQCAKDLLVEFNGAAMANQNMTEAQARDILEYFRTLK
>NZ_CP019288.1|WP_160129589.1|2707983_2708556_-|fasciclin-domain-containing-protein
MKTIHLFKVIPVAIFLVLFYSCKNEVNKESTTTQTSTEAASESQKGQAFIDDDSSTPNVLQIAINSPDHTTLVAAVQAADLENVLVNAGPLMVFAPTNAAFDALPAGTVEELLKPENKQKLAAILKHHVTAGNYDKNFLKNFKKLGQADDTNVKVEVKGDDVYIGGAKILASVKAGNGIVHVVDKVILPE
>NZ_CP019288.1|WP_160129588.1|2705996_2707955_-|Sec-dependent-nitrous-oxide-reductase
MKKYKFQLGSLLVALILLTSCGNNNGKSSGALNSSAAEKVYVAPGEHDEFYAFMSGGYSGNLTVYGLPSGRMFKEIPVFSQFPTSGYGYSEETKPMLETSHGFVPWDDSHHPDISQTNGELDGRWIFINGNNTPRIARISLTTFETEEIIEVPNSAGNHSSSFVTENTEYVVAGTRFSIPIPQRDMPINQYKGNFQGALSFISVDPKHGHMDIKFQIIMPGFNYDLSHPGRGKSHGWFFFTTYNTEEANTLQEVNASQNDKDFIAAINWKKIEEYVNNGGGTKVPANYAHNIYDESTHTATSTMKKEVLTVNPLDVPGAVFFLPTPKSPHGCDVDPTGQYIIGNGKLSADLTVHSFDKMIAAIEGKKFDGEAYGIPILKFEDVLAGTVKSGGLGPLHTEFDGKGNAYTTFFISSEVVKWKLGTWEVIDRKPTYYSVGHLMIPGGNSRKPFGKYVVALNKITKDRYLPVGPEMEHSAQIYDISGEKMELLYDFPTHGEPHYAAGIPAELLAPKAKKIYRLDENKHPYAVTSPDQARVERKGKEVHVYMSTIRSHFTPDNIEGVKVGDKVYFHITNHEQDFDVPHGFAMIGQNSSELLVMPGQTKTSVWEPKQVGVWPFYCTDFCSALHQEMQGYVRVSPADSSIEISWSLGED
>NZ_CP019288.1|WP_160129587.1|2705273_2705888_-|hypothetical-protein
MKKASILMILGALLLMGLFKFPLWNIMLGAPQYPEPLGMNIYIDGIQGMNEFDIQNIDGLNHYIGMKTIPKAADMWEFKVFPLVIGSMAIFGMLIGFLGYFGKVSYHWFLGWLVLMTILGILGMYDFNAWMIDYGTNLDPNAIMKLQNADGTPMSYKPPLLGHQKLLNFDAYSYPRLGGYLMGIGMLFTLIAYFLGKKSTKNSI
>NZ_CP019288.1|WP_160129597.1|2715665_2716052_-|GxxExxY-protein
MDQKTENDISYLIRGAIFKVFNELGPGLLESVYEAVLLYELEKQGLSVKRQVALPVFYDGIKLEIGFRLDLLVNDKVIIEIKSVETLAKVHHKQVLTYLKLSNLKLGILVNFNVENISKGIFRKVNGL
>NZ_CP019288.1|WP_160129598.1|2716161_2716890_-|ATP-binding-cassette-domain-containing-protein
MSNNKVIQVESLTKMFGDFTAVNAITFEVEKGEIFGFLGANGAGKTTAIKMLIGISKPTSGKAKVAGFDVFTQAEDIKKNIGYMSQKFALYDDLTVKENITFFGGIYGLSRKRIKEKTAVLIEELGLEKVANKLVGSLPLGWKQKLSFSVSLLHDPKIVFLDEPTGGVDPITRRQFWEMIYKAANQGTTVFVTTHYMDEAEYCDRVSIMVNGKIEALDTPKKLKEQFKADNMNDVFLKLARG
>NZ_CP019288.1|WP_160129599.1|2716982_2717885_-|ATP-binding-cassette-domain-containing-protein
MSISVNHISKSYKKVNALQDISFEVKPAELFGLIGPDGAGKTTLFRILTTLLIANEGTATVAGFDVVKEYKKIRNSVGYMPGKFSLYQDLTVEENLNFFATIFGTTIEENYELIKEIYVQIEPFKNRRAGKLSGGMKQKLALCCALIHKPKVLFLDEPTTGVDPVSRKEFWEMLKRLQQKNITILVSTPYMDEAALCDRIALIQDGKILQIDTPKAIVKHYSKQIYNVRASNMYQLINSLKAYEYNHSVYPFGEFVHYTDKRTDFNPKDLIQYLKSENLSNIEIEKTAATIEDTFMELAK
>NZ_CP019288.1|WP_160129600.1|2717890_2718349_-|OsmC-family-protein
MEKHTYNVNVSWTQDRKGIMCSPELKNNETNETNCLEVATPPEFPGGMPNIWSPEHLFTAAVSSCLMTTFLAIAEFSKLEYVSFKCDSKGILEKVDGKFVISEILLFPEVVIADESKRDRTERIVEKSEKACLISNSITSKITMETKIIVQN
>NZ_CP019288.1|WP_160129601.1|2718367_2718853_-|hypothetical-protein
MKYLIFTLSLLALIGCKDNTQQENKTTAIEESVNAATEQNINEVSVYSNTWTEEIKMNNGAKWQANAETNEGVKNMQNSIKIQKTSTLKEYQKLAEQLNKDISYVIKKCSMKGDSHNNLHVWLLPLMEKIEALSEAKTVEEASKLKHSIEENINGYNTYFQ
>NZ_CP019288.1|WP_160129602.1|2719209_2720100_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MKNYNYIIGLCMIAFSLFSCGNDTRKAAGYGNFEATEIMISAENNGKLMQFDVNVGDLLQKEQFIGYIDTIPLALKREQLEVSKAVISSKSKGVLSQINVLNAKLKTANINKTRTENLIKDNAGTQKQLDDISGEIDVIKSQIRSVEIQNAPVVNELKSIDVQLKQIDNQIQKSKIINPIKGTVLTKYAEPNEITAFGKPLYKIANLSTMQLRVYISETQLATIKIGQEVTVKIDAETAMKSYNGIVSWIASEAEFTPKIIQTKEERVALVYAVKIDVTNDESLKIGMPAEMWLKN
>NZ_CP019288.1|WP_160129603.1|2720110_2721361_-|TolC-family-protein
MKRFIIILIILITLPSVAQQRITLEECYDLVIENYPLAKQLLLFETQNKLDAAVISTSKLPQLSLDAQATYQSEVIEIPIPNANIESLNKDQYRATVSVNQLIYNGGLVDASLKLKSAQLKTKQKQIEVGLYQLKQQINQLYFSILLTQESELLLNAKQVQLQAKLKEVKSGIKYGAILPSSDKILEAELLKISQQFQELESNKTALIETLASLINRPLDASTVFQNPLIETEFQKELNRPELALFQLKKEEIENSESLIHKQNSSKLVGFAIGGYGNPGLNMLDNSFQPFYTIGIKLNWNVFDWNSNKKQRESLTINKDIVDTETEIFKLNTNIELNQQQKEIDKTKAFITSDLEIINLRKEVLKSADSQLKNGVITASAYITELTNLYEDENTLVKHKIQLQLAKANYNVIKGQ
>NZ_CP019288.1|WP_160129604.1|2721362_2721977_-|TetR-family-transcriptional-regulator
MKKAKDENKEEHILDAAKNVFQSKGMNGARMQEIADKAGINKAMLHYYYRSKQLLFEAVFKNAFSLLAPQLNAILNDDSSIEEKIKNFTSNYISFIVKHPYLPNFIIQELNRNPDFILKLKENKGFPNLEKFKKQVEEEIQKGILKPISAEQLFINIMALNIFPFVAKPLIMAFTNTDEKNYKQLMEDRKIEVSNFIINAIKNS
>NZ_CP019288.1|WP_160129605.1|2723209_2725621_+|TonB-dependent-receptor
MNFSKYILFLLSFSYVSQAQTEITGNVVDDTDAAIEFANVILLDQNNDIVIGTITDENGKFILKASKGNYRLLISFLGFDDWKKNISLLNTVSLGKIVLTTSENELEAVTITARKPTLVKKVDRIEFNIGNTILSDGDAWEALKKTPGVAASATGSLQIFGKSGILVMIDDRPVQLSSEELKNMLEGMSASEIKSIEVITNPPAKYDAEGNGIINIVLKEKKSLGYNASVSSRYTQGVFAKFTNGASINHKGEKTTVAANYNLGNGKRNVEENSDINFLNTQGDVFNFWNESSDRTTDYLSHNFRASLDYYLSEKSILGVKIDGSIAPKQETVNKTITNVFDSTNTLDSLFVNNNSTDRDRENLSYNVNFLQNFKKDGQSLSVDFDFVDYNSSRSQGVNTDFFNENQNFERNEFFTSTSEQDIEIYSSKVDYAHPIDSTRSFEVGAKFYNIQTDNALVYLNRDNTTGNLIFDATRSNQFLYSEKVYASYASFEKNFSKLYLKLGLRAEYTETQGNSITLNQVTNNDYFELFPSAFLQYQLKEGSSLGLNYSRRIQRPNYSLLNPFQFFSSPFSFIEGNPFLQPSFSDKFELSYSINNKYFLTLYYTYTDAPFTQLSTQDNASQTFRYNAVNLDKDIIYGVFFMTSFGVTDWWQCYMNFDAYFNEFEFAAPGTDQLVTNGRWVTSPYIWNEFSVSKKHDLSVELTAQYYSPRVQGGFDIQERSEVSIGVKKKLFNKKGSLAIYVADIFDNNKFTLVSDYALQNHIFRENPENQYVRFSFSYRFGNNGIKTRKRKDGTQDEKNRL
>NZ_CP019288.1|WP_160129606.1|2725694_2725862_+|hypothetical-protein
MKVKFSKQDREALSKSLASFENDKLKEVLNVSGAQAKISTWERSVWQKTSDLSLA

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Crispr_ID: NZ_CP019288_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_8

2759831-2759919

Orphan

Consensus_repeat	Method
TAACGATTAACGAATGTTGATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_8

>merge|NZ_CP019288|8|2759831-2759919|CRISPRCasFinder
TATCGATTAACGAATGTTGATTTAAGAAGTTTTAAATTCTGCTTCACGACTAACTCCCAATAAGATTAACGATTAACGAATGTTGATTT

>NZ_CP019288|8|8|2759831-2759919|CRISPRCasFinder
TATCGATTAACGAATGTTGATTT	AAGAAGTTTTAAATTCTGCTTCACGACTAACTCCCAATAAGAT
TAACGATTAACGAATGTTGATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160129639.1\|2764984_2766355_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240242
NZ_CP019288.1\|WP_160129640.1\|2766392_2767595_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|372999
NZ_CP019288.1\|WP_160129637.1\|2764010_2764268_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131909.1\|2754656_2755151_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377341
NZ_CP019288.1\|WP_160129641.1\|2767692_2767929_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129634.1\|2760263_2760431_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131908.1\|2749903_2751349_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|237676
NZ_CP019288.1\|WP_160129625.1\|2751391_2752351_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160128944.1\|2762359_2763472_+\|ISAs1-family-transposase	unknown	unknown	gnl\|CDD\|379382
NZ_CP019288.1\|WP_160129629.1\|2756190_2756535_+\|preprotein-translocase-subunit-SecG	unknown	unknown	gnl\|CDD\|273280
NZ_CP019288.1\|WP_160129630.1\|2756685_2756964_+\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP019288.1\|WP_160129633.1\|2759973_2760153_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129627.1\|2753386_2754643_+\|sigma-54-interacting-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP019288.1\|WP_160129628.1\|2755161_2756184_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236877
NZ_CP019288.1\|WP_160129632.1\|2758883_2759597_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160129635.1\|2760447_2760957_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129636.1\|2761187_2762099_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129626.1\|2752377_2753370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129631.1\|2757041_2758676_+\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP019288.1\|WP_160129638.1\|2764264_2764753_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160129630.1\|2756685_2756964_+\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	7.12831e-45
NZ_CP019288.1\|WP_160129640.1\|2766392_2767595_+\|IS4-family-transposase	gnl\|CDD\|372999	pfam14294, DUF4372, Domain of unknown function (DUF4372). This domain family is found in bacteria, and is approximately 80 amino acids in length. The family is found in association with pfam01609. There is a single completely conserved residue G that may be functionally important.	3.37366e-18
NZ_CP019288.1\|WP_160129627.1\|2753386_2754643_+\|sigma-54-interacting-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	1.47882e-104
NZ_CP019288.1\|WP_160131909.1\|2754656_2755151_+\|hypothetical-protein	gnl\|CDD\|377341	pfam04390, LptE, Lipopolysaccharide-assembly. LptE (formerly known as RplB) is involved in lipopolysaccharide-assembly on the outer membrane of Gram-negative organisms. The lipopolysaccharide component of the outer bacterial membrane is transported from its source of origin to the outer membrane by a set of proteins constituting a transport machinery that is made up of LptA, LptB, LptC, LptD, LptE. LptD appears to be anchored in the outer membrane, and LptE forms a complex with it. This part of the machinery complex is involved in the assembly of lipopolysaccharide in the outer leaflet of the outer membrane.	1.96935e-05
NZ_CP019288.1\|WP_160129628.1\|2755161_2756184_+\|hypothetical-protein	gnl\|CDD\|236877	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional.	0.00178155
NZ_CP019288.1\|WP_160129632.1\|2758883_2759597_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	5.05021e-12
NZ_CP019288.1\|WP_160129639.1\|2764984_2766355_+\|hypothetical-protein	gnl\|CDD\|240242	PTZ00046, PTZ00046, rifin; Provisional.	0.00544986
NZ_CP019288.1\|WP_160128944.1\|2762359_2763472_+\|ISAs1-family-transposase	gnl\|CDD\|379382	pfam13808, DDE_Tnp_1_assoc, DDE_Tnp_1-associated. This domain is frequently found N-terminal to the transposase, IS family DDE_Tnp_1, pfam01609 and its relatives.	2.74239e-36
NZ_CP019288.1\|WP_160131908.1\|2749903_2751349_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|237676	PRK14329, PRK14329, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP019288.1\|WP_160129631.1\|2757041_2758676_+\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP019288.1\|WP_160129629.1\|2756190_2756535_+\|preprotein-translocase-subunit-SecG	gnl\|CDD\|273280	TIGR00810, secG, protein translocase, SecG subunit. This family of proteins forms a complex with SecY and SecE. SecA then recruits the SecYEG complex to form an active protein translocation channel. [Protein fate, Protein and peptide secretion and trafficking].	9.03402e-16

>NZ_CP019288.1|WP_160129632.1|2758883_2759597_-|helix-turn-helix-domain-containing-protein
MKSLKNIRIQYCTFILFACFMCNTTVHANEQKEQNFEQTVDSFAYQTQDKQLEQLLQTQQALETRYYLSIGIVLLLVLIFGLLCARKTKGYNHLKKIIELLEKNNQDKSNDDKKSNETYIEIDETIVASILQNLQAFEKERGFLITKITLHQFAKQLKTNTKYLSKVINTYKLKSFRNYINDLRIQHSLQELENNTNYRKYTVKAMAKESGFGTTESFSKAFQKNTGETVSSFLRQF
>NZ_CP019288.1|WP_160129631.1|2757041_2758676_+|chaperonin-GroEL
MAKNIKFNIEAREGLKRGVDALANAVKVTLGPKGRNVIISKSFGAPSVTKDGVTVAKEIELADPLENMGAQMVKEVASRTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGIDKAVAAIVEDLNKQAKKVGDSSEKIKQIAAISANNDEEIGDLIARAFKEVGKEGVITVEEAKGTKTDMKTVEGMQFDRGFLSPYFVTNSEKMEVELESPYILLFDKKISSMKDLMAVLEPVAQTGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATIDMLGTAEKITINKDNTTVVNGFGDADMIKTRVGQIKAQIESTTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALVRAKGVLDKITTDNLDEVTGIKIIARAIEEPLRTIVSNAGGEGSVVVSKVMEGKKDFGYNAKTEEYVDMLKAGIIDPKKVTRIALENAASVAGMILTTECALVDIKEDAPAGGMPPMGGGMPGMM
>NZ_CP019288.1|WP_160129630.1|2756685_2756964_+|co-chaperone-GroES
MSKVNIRPLADRVLIAPLPAATKTASGLYIPDSAQEKQQRGTVVAVGSGKKDEPLTVKVGDTVLYGKFSGSEIKYEGVDYIIMREEDILAIV
>NZ_CP019288.1|WP_160129629.1|2756190_2756535_+|preprotein-translocase-subunit-SecG
MSSTYYIFIILILIVAFLLMLVIMVQNPKGGGLSSSFGGGGTQQIGGVQKTTDFLDKSTWALATILIGLILVTNFTNLSNSSSQSKVSGDAIEQTTPPVDTNTNTTDEKTTNGQ
>NZ_CP019288.1|WP_160129628.1|2755161_2756184_+|hypothetical-protein
MNISDFTYILQNPTQINVSQTEAIEAITKEFPYFQAARVVHLKGLKNQDSFKYNQNLKVAAAYTTDRSILFDFITSRTFDQHKISSTIKESHNNTNEIEVAIEEVKIDQNLLMEDAIKTKIEEANAILDPDLFQPKVTETLIPIAAVAEIKKDKKKKGKKKDKKKKKSKDKKVVAKKIEIETIETPEETLQLGKPLAFEQSEKHSFSQWLQLASLKPIDRSVDQSPEKEVVKEPEIVAKEPKRKASKEEKRKRFDLISKFIDKNPKIKPKPTLQKTINLASETNVDQSMLMTETLAKVYLEQKKYKKAMKAYDILILKYPEKSGFFADRIRAIKKLQQKN
>NZ_CP019288.1|WP_160131909.1|2754656_2755151_+|hypothetical-protein
MKIIIATLVVAITLVSCGVYNFTGTGDLNAKTYQVNYFQNNAPIIEPGLDRDFTLALQDLILNQTSLDLVRANGDLLYEGEIVEYRVSPMSATANNTASQNRLTIGVQVRFTHKNRPEDDFDQRFSFFYDYPASTQLISVQSTAFQEIFDRITQDIFNASLAKW
>NZ_CP019288.1|WP_160129627.1|2753386_2754643_+|sigma-54-interacting-transcriptional-regulator
MESIQAIKQRFGIIGNDPALNRAIEKAIQVSPTDISVLVTGESGVGKESIPKIIHSLSHRKHGKYIAVNCGAIPEGTIDSELFGHEKGSFTGATQTRNGYFEVADNGTIFLDEVGELPLTTQVRLLRVLENGEFIKVGSSKVQKTNVRIVAATNVNMFEAIKKGKFREDLYYRLSTVEILLPPLRARKEDIHLLFRKFASDFALKYKMPSIRLDERAAELLIKYRWNGNIRQLRNVAEQISVLEETRAITPETLLQYLPNTSGNLPAVIEKSKSDSDFSSEREILYKVLFDMKSDLNDLKKLTMELMQNGVSEKVKDENESLIQKIYGDETDEVFQEEEDDSPVKLLPVSQQNAVAEETDKYHFAEDVEEEETLSLHDKELELIKKSLERNKGKRKAAAKELGISERTLYRKIKQFDL
>NZ_CP019288.1|WP_160129626.1|2752377_2753370_+|hypothetical-protein
MKKTVLFTTIILSLICFSCDNEPYEGEIFIADPSTGNPTDPGNGDPTDPVDPTDPTNPGTTLQLADYDYMKSFSSPLGGETSFTADFVINSQNQFTAQNTSITFLGTTVNGVGAVIRDQNSDVIELRTTVDNILVNRTTVTYNLGKVVEIAFEDLQDPVDSFTFSFIHNNNEITRTKEGTNFTTKFTFDATTSKLLKRETIENGTINKTEIISYDAAGNLTSAVITGQDANTYTYTYDSNTNPLRNTLNDLYLFSILNDEYDDQYEHWQAVIYSTNNMTVTTTSQGSSNLDVQYDASSRITSRSGTIFTSVPTISSDATITINETFQYVN
>NZ_CP019288.1|WP_160129625.1|2751391_2752351_+|hypothetical-protein
MKKTFLITSVLLAFLCFSCDDEPLDADIAIDIPTQGTPTDPTDPTDPTDPTDPTDPTTTLTAYTYDVTTNAPLFGEIIIDTDFNIQNGIVVSQNTELTIFGFTENSLSTYTRNTSGNITLIQDNAGGGGQNTTTITYDGTNISQIDYDFSADDVDDYTHNFTYSGNTISKTTVGSTDTATFTFDPSTSRLVSIEYFDNGTSIQTETLSYSSTGNCTQSVVTTGGTPRTSTFNFDTNTNPLKTVFQDAYMLSILNGDHEDEIASTIANFHGANNWIGGESTDGTFDFSAMYDTSNKIVSKSGNYDLGDGVTVLQSETFQY
>NZ_CP019288.1|WP_160131908.1|2749903_2751349_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MEKIIDEDKQGASIVLAENPKNTRKLYIESYGCQMNFADSEVVASILAKEGFNTTNRLEEADLVLVNTCSIRDKAEQTVRKRLEKYNAVKRINPKMKVGVLGCMAERLKSKFLEEEKIVDMVVGPDAYKDLPNLLQEIDAGRDAINVVLSKDETYGDISPVRLNSNGINALVSITRGCDNMCTFCVVPFTRGRERSRDPQSILEEIEELSAKNFKEITLLGQNVDSYLWYGGGLKKDFVKASEMQKATAVDFSKLLDLVAIKFPKLRIRFSTSNPQDMHEDVFHIMAKHRNICKHIHLPVQSGSDRILKEMNRLHTREEYFTLIDKIRQILPGCGISQDLIAGFPTETEQDHQDTLSLMDYVKYDFGYMFTYSERPGTMAERKMEDDIPEATKKRRLAEIIELQRSHSAYRTKLHLHTIQEVLIEGTSKKSDGHWMGRSSRNTVVVFPKENYQPGDFVNVKIHDCTSATLIGEPVALSENN
>NZ_CP019288.1|WP_160129633.1|2759973_2760153_-|hypothetical-protein
MRIEIISNNILLLSVFIFIVIIIAVIIYLYAFTSMKRNSKSEKENEVDDEIEKELEENT
>NZ_CP019288.1|WP_160129634.1|2760263_2760431_-|hypothetical-protein
MTFLHLTTGQNILKWIGIFTLMYLFRKLMNFLDKKYHWNMYDVTWKSIFSHKKKH
>NZ_CP019288.1|WP_160129635.1|2760447_2760957_-|hypothetical-protein
MKKHTLILFQILIVTIIVTITYWLTQEYIVFNSSFLEIKILSPLFYLLPVILSFLMSLWLVIKFDTIPKFILRLSITLVNIYLFLSVFMGTSKYCEDEKNMELVYLVFLWSIFLISVFMLIKYILPKLKFKDVLIIGVSTVLAFIDFYFFFITLDLLYYVGWFKLVNNI
>NZ_CP019288.1|WP_160129636.1|2761187_2762099_-|hypothetical-protein
MSNGIKRIGKGLFAIFMIKLSLVVGVLAFQACQTESTFDNEVQEEAKTNFLAALQETNQRLQEIVISPSATKGDIKGSDLMKENTTEITTFKMCLLLNQDDTADPSNTGVIDPTSVDTFGEIVTIGNQTGTRPVILDDANSDIIANDPVAFGYSMCFDIPVEPTVEAMELSIADAKNYLITKGLTESDIQNLFTADNEGGAIEEYNLVPTVMMLIAEEQNENSTASVNFMSLFGQNAHASRLGQCAGDALGISAIAEVVRLGVNSSAGKKLLKKAIRKVASRTLGWVGVAIFVYEFGDCMDWW
>NZ_CP019288.1|WP_160128944.1|2762359_2763472_+|ISAs1-family-transposase
MKPSDNLKDIFGQIQDHRSHINKLHNLVDILLIGIIAVISGAETWEQMAGFAKSKEPFLKKFLELPNGIPSKVTINRVFSAIDSEQFESCFIDWVNSIANLSKGQIIAIDGKTIRGAKSHGKKSPIHMVSAWACENNLVLGQVKTAEKSNEITAIPELLNILSIAGNTITIDAMGTQKEIAKKIIELDADYILAVKANQPQLLEHIEDEFRFSKQLETYTKHDLDHGRIETRTCSVITDFKFIEQDNQWKNLQSIIKIDSIREFKNSDKATEKATRYYISSLRNDASEFQSKIRSHWAVENKLHWTLDVAFSEDASRKRAGNAAQNYSILLKIALNLLKNETSKKLSMKSKRLEAGWNEDYLLRILNLKV
>NZ_CP019288.1|WP_160129637.1|2764010_2764268_-|hypothetical-protein
MIHKEQRKELKKILGYHYTADVLKILKEKKVTNRKGTAYGTSMIRNVFNGLNENKEIENAIMELCIQTQEETKKTVEKRNRILGI
>NZ_CP019288.1|WP_160129638.1|2764264_2764753_-|hypothetical-protein
MALENLISIEFTTEELTALDTHLDGIQQVLAGKMVNITPEQRQQYGSIGNQNKLIVDKAKNYMEQHPNWVPNFIDKTEFDKDYNARQQMEERTQRLQNLTQQLLDTKTLLDHDNYTNTLSFYRMIRYLAGENEPGSKTVYEDMKVLFARSGRPTSTDQQTDA
>NZ_CP019288.1|WP_160129639.1|2764984_2766355_+|hypothetical-protein
MNKLKSLKMNMLCKIYSLLTILLLFPLFLSAQDNVKDTLSNKSFDDLKKIFYHYKNYGQTETGKQVAFFTLKKARKEQNIRAVANSYIRLCRVSYDTPEIALKYTDSCIFYATKYKLEDLIARGQFYKGLVLFDLGKYSNSLDSYIQASEYYEKQNNEMYYSLRYNIALLKLKVRSHTEAIEIFKENLIYENKKATYGKSYLNILYGLSIAYTSNRMLDSAYTINKKAYQQALKFNDHSHLYFTYAQGALHYVKKDYKSARDSLLKSLSFLKKSKDYSNLAISYYYLGSISSVEIDKIKYYKKVDSIFKVKKYIIPTPRKAYEGLINYYKSKDDFKNQLYYTDRLLIVDTVINKEYRNVSQTFYNEYDTPRLIADKELLIFKLSTENTSFKYKIFILLIALIFVLIILILVYRRKKRNELKLRKLVTSLEVKSNIKETNILKHCCPIKKKPTSWLL
>NZ_CP019288.1|WP_160129640.1|2766392_2767595_+|IS4-family-transposase
MGKSTYFSSKSVFGQLISLIDDSMIKKEVKKCNSDRYTKRFTTKDHLISMLFCSFSKCTSLREISGAMLGLSGKTSSFQLNHIPKRSTLSDANKKRDVLVFENIYHQLLKQYGGFLSDSRIKDVIKKQVKIFDSSTISLFKNIMECVGRHSKSGKRKGGIKVHTVVNADEIVPSLVWFSEAKTHDHKFLEKLNCDKNTIYVFDKGFNDYRAFEHFTAYETGFVTRIKDNASYRKIEDLDVADYIHNGVLEDQIIEVEVKKGKEKTPLKLRKVTFYDRVNKREFEFLTNLFDLRADLIAALYKIRWQIELLFKQLKQNFPLKYFLGDNENAIKIQIYCVLIVNLLFAVIKKRLKRSWAFSNLVSFCKIHLFNYINLMKFLENPEKDWIIDKAESEQLTFNW
>NZ_CP019288.1|WP_160129641.1|2767692_2767929_+|hypothetical-protein
MILKEKKRKSFIDKDTLNQILKSLDEFEKNNFFLTPKLTLNSFAKDLDTNSKYLSIVINDYKSQTFKNYVNNLRIEYM

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Crispr_ID: NZ_CP019288_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_9

2841371-2841465

Orphan

Consensus_repeat	Method
TTTGAATCATTGAATTGAGCGAAGCGAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_9

>merge|NZ_CP019288|9|2841371-2841465|CRISPRCasFinder
TTTGAATCATTGAATTGAGCGAAGCGAAAAATTGAAACGGCCAAAAAACCTTGAATCATTGAATTTTTGAATCATTGAATTGAGCGAAGCGAAAA

>NZ_CP019288|9|9|2841371-2841465|CRISPRCasFinder
TTTGAATCATTGAATTGAGCGAAGCGAAAA	ATTGAAACGGCCAAAAAACCTTGAATCATTGAATT
TTTGAATCATTGAATTGAGCGAAGCGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160129693.1\|2838654_2839533_+\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP019288.1\|WP_160129701.1\|2845837_2846842_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|381626
NZ_CP019288.1\|WP_160129687.1\|2832391_2833447_+\|arsenosugar-biosynthesis-radical-SAM-protein-ArsS	unknown	unknown	gnl\|CDD\|275025
NZ_CP019288.1\|WP_160129691.1\|2835935_2836904_+\|arsenosugar-biosynthesis-arsenite-methyltransferase-ArsM	unknown	unknown	gnl\|CDD\|237007
NZ_CP019288.1\|WP_160129692.1\|2837223_2838651_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129694.1\|2839540_2840356_+\|DUF547-domain-containing-protein	unknown	unknown	gnl\|CDD\|368117
NZ_CP019288.1\|WP_160129695.1\|2840458_2841235_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133013
NZ_CP019288.1\|WP_160129689.1\|2834149_2834764_+\|DUF2064-domain-containing-protein	unknown	unknown	gnl\|CDD\|275102
NZ_CP019288.1\|WP_160129686.1\|2831914_2832250_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|200420
NZ_CP019288.1\|WP_160129704.1\|2849544_2851401_+\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|223425
NZ_CP019288.1\|WP_160129703.1\|2848179_2849520_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223523
NZ_CP019288.1\|WP_160129705.1\|2851625_2852312_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133022
NZ_CP019288.1\|WP_160129697.1\|2842078_2842582_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP019288.1\|WP_160129700.1\|2844573_2845833_-\|outer-membrane-protein-assembly-factor	unknown	unknown	gnl\|CDD\|227116
NZ_CP019288.1\|WP_160129702.1\|2846879_2847800_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129690.1\|2834785_2835598_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|350160
NZ_CP019288.1\|WP_160129698.1\|2842864_2843716_-\|TraB/GumN-family-protein	unknown	unknown	gnl\|CDD\|350614
NZ_CP019288.1\|WP_160129688.1\|2833625_2834147_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP019288.1\|WP_160129706.1\|2852312_2853818_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133059
NZ_CP019288.1\|WP_160129699.1\|2843900_2844341_-\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160129693.1\|2838654_2839533_+\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	1.23932e-24
NZ_CP019288.1\|WP_160129701.1\|2845837_2846842_-\|glycoside-hydrolase	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	1.00721e-97
NZ_CP019288.1\|WP_160129687.1\|2832391_2833447_+\|arsenosugar-biosynthesis-radical-SAM-protein-ArsS	gnl\|CDD\|275025	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein. Members of this protein family have an N-terminal radical SAM domain (pfam04055) and a C-terminal pfam12345 domain. The C-terminal region has several conserved Cys residues, one of which is replaced by selenocysteine in at least five bacterial reference genomes.	0
NZ_CP019288.1\|WP_160129691.1\|2835935_2836904_+\|arsenosugar-biosynthesis-arsenite-methyltransferase-ArsM	gnl\|CDD\|237007	PRK11873, arsM, arsenite methyltransferase.	1.83854e-37
NZ_CP019288.1\|WP_160129690.1\|2834785_2835598_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|350160	cd09009, PNP-EcPNPII_like, purine nucleoside phosphorylases similar to human PNP and Escherichia coli PNP-II (XapA). Human PNP catalyzes the reversible phosphorolysis of the purine nucleosides and deoxynucleosides inosine, guanosine, deoxyinosine, and deoxyguanosine. Patients with PNP deficiency typically present with severe immunodeficiency, neurological dysfunction, and autoimmunity. Escherichia coli PNPII, product of the xapA/pndA gene, catalyzes the phosphorolysis of xanthosine, inosine and guanosine with equal efficiency and has been referred to as xanthosine phosphorylase and inosine-guanosine phosphorylase. E. coli PNPII is also capable of converting nicotinamide to nicotinamide riboside, and may be involved in the NAD+ salvage pathway. It is one of two purine nucleoside phosphorylases found in E. coli, which also contains PNPI, which displays a different substrate specificity and belongs to a different subgroup of the nucleoside phosphorylase-I (NP-I) family than PNPII. NP-I family members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	1.02008e-140
NZ_CP019288.1\|WP_160129694.1\|2839540_2840356_+\|DUF547-domain-containing-protein	gnl\|CDD\|368117	pfam04784, DUF547, Protein of unknown function, DUF547. Family of uncharacterized proteins from C. elegans and A. thaliana.	1.13343e-33
NZ_CP019288.1\|WP_160129695.1\|2840458_2841235_+\|glycosyltransferase	gnl\|CDD\|133013	cd02522, GT_2_like_a, GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	5.32311e-80
NZ_CP019288.1\|WP_160129689.1\|2834149_2834764_+\|DUF2064-domain-containing-protein	gnl\|CDD\|275102	TIGR04282, hypothetical_protein, transferase 1, rSAM/selenodomain-associated. Members of this protein family show strongly correlated phylogenetic distribution, and in most cases co-clustering, with an unusual radical SAM enzyme (TIGR04167) whose C-terminal pfam12345 domain often contains a selenocysteine residue. Other members of the conserved gene neighborhood include another putative glycosyltransferase, an alkylhydroperoxidase family protein (TIGR04169), and a phosphoesterase family protein (TIGR04168). The cassette is likely to be biosynthetic but its exact function is unknown. [Unknown function, Enzymes of unknown specificity].	2.78427e-87
NZ_CP019288.1\|WP_160129686.1\|2831914_2832250_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|200420	TIGR04169, perox_w_seleSAM, alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein. Members of this family are usually annotated as putative carboxymuconolactone decarboxylases, are related also to alkylhydroperoxidase AhpD, and contain a peroxidase-like Cys-X-X-Cys putative redox-active disulfide. All members occur in genomes with a radical SAM protein of family TIGR04167, which occasionally are selenoproteins.	1.71673e-66
NZ_CP019288.1\|WP_160129704.1\|2849544_2851401_+\|4Fe-4S-binding-protein	gnl\|CDD\|223425	COG0348, NapH, Polyferredoxin [Energy production and conversion].	1.30481e-13
NZ_CP019288.1\|WP_160129703.1\|2848179_2849520_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|223523	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only].	7.603e-51
NZ_CP019288.1\|WP_160129705.1\|2851625_2852312_+\|glycosyltransferase	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.70295e-40
NZ_CP019288.1\|WP_160129698.1\|2842864_2843716_-\|TraB/GumN-family-protein	gnl\|CDD\|350614	cd14789, Tiki, Tiki homology domain antagonizes Wnt function via cleavage of amino-terminal residues. Tiki is a membrane-associated metalloprotease that inhibits Wnt via the cleavage of its amino terminus, diminishing Wnt's binding to receptors. Wnt is essential in animal development and homeostasis. In xenopus, tiki is critical in head development. In human cells, TIKI inhibits Wnt-signaling, which is important in embryogenesis, homeostasis, and regeneration. Deregulation of WNT contributes to birth defects, cancer and various diseases. TIKI homology domains are part of the TraB family and are related to the Erythromycin esterase, GumN plant pathogens, RtxA toxins, and Campylobacter Jejuni heme-binding, Chan-like proteins. TraB/PrgY are identified in gut bacterium Enterococcus faecalis, but its function has not been well characterized. Plasmid-borne, TraB has been implicated in the regulation of pheromone sensitivity and specificity. Based on homology to TIKI activity, it has been proposed that TraB acts as a metalloprotease in the inactivation of mating pheromone. The TIKI/TraB family has 2 conserved GxxH motifs and conserved glutamate and arginine residues that may be catalytic.	1.66822e-63
NZ_CP019288.1\|WP_160129700.1\|2844573_2845833_-\|outer-membrane-protein-assembly-factor	gnl\|CDD\|227116	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane].	2.21953e-13
NZ_CP019288.1\|WP_160129697.1\|2842078_2842582_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	4.15577e-27
NZ_CP019288.1\|WP_160129688.1\|2833625_2834147_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	8.419e-28
NZ_CP019288.1\|WP_160129706.1\|2852312_2853818_+\|glycosyltransferase	gnl\|CDD\|133059	cd06437, CESA_CaSu_A2, Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants were significantly smaller, while the single mutant plants were almost normal.	8.14552e-149
NZ_CP019288.1\|WP_160129699.1\|2843900_2844341_-\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	1.11141e-40

>NZ_CP019288.1|WP_160129695.1|2840458_2841235_+|glycosyltransferase
MKPYKISIIIPILNEAENIISLLQILLERMKHAHHEILLIDGGSTDTTVKITTDFISKLHSQNNTSQKRCVDKLFETENSQTHIQLFKSPKGRAKQMNFGAQYATGEILYFLHADTFPPKHFDKFILQKVKEGSLAGCFRLKFDYPHPVLLVSQFFTRFNRSWCRGGDQSLFIQKSLFETLNGYDESYAIYEDCEFINRLYENDQFTIIPKSVKTSARKYREQGTWRLQYHFAVIHIKKSKGASPEQLYTYYKKHVAS
>NZ_CP019288.1|WP_160129694.1|2839540_2840356_+|DUF547-domain-containing-protein
MKHLLLLIGAFFVFACYANKTAVKENSTINTIDTTQKETVTDTSVSATAETVAVKPKTVVNHEAWTALLKKHVTKTGKVNYQGFREDADRLKAYIKSLSKQIPTKSWTKDEKLAYWINAYNAMTVDLILKNYPLESIKNIDNPWKQELWTLEGKEYDLNTIEHKILRKMNEPRMHFAINCASFSCPPLLNKAFTAENMDAQLTHVTKTFLADSKRNTITQNKVEISKIFKWFSSDFKENGSLIDFLNKYSAVKISKDADVDYKEYDWTLNE
>NZ_CP019288.1|WP_160129693.1|2838654_2839533_+|sterol-desaturase-family-protein
MEKYLEIIKQSYNDYWNYFQGQVFFQNWENYFYGLIVISLLVWVLEIIFPWRKNQSIFRKDFWLDTFYMFFNFFIFNLIIFIALSNTVAAFFNDILGMIGVSIQSFQLFDVDNLPKWLGLLIFFVVADFVQWNTHRMLHRVNFLWNFHKVHHSVKEMGFAAHLRYHWMETVVYKSMLYIPMAIIGGFSVNDVAFVYFFTIAVGHLNHANLGWDYGILKYVFNNPKMHIWHHSKKLPVRFGVNFGLTLSIWDYLFKTNYIPKNGRDIELGFTNDESFPQDFLQQEIYPINLKK
>NZ_CP019288.1|WP_160129692.1|2837223_2838651_+|hypothetical-protein
MKTFLSVFSCLIFSMIMVGQTVSIEEKKSQIKYLEREEADQYTLSKKGFTAVYEHKKTYYSINERFKLYRRKIVADVTKNQSSNKPLNLENISEIRTYDFDKLQHKKFTAYKGDFKYELYQFNKEFFMLEVFYNYSENDIKKDWKYYSSELVPFEFIQLKDKKKILTLISHTHLNYIVPKKDTLELKIWTRYQAKGFVPLNFSETQSYTPTYDSKKLYLISSHLHQLGNYYHIITEKGKKRLYNYRGEDVLQKRYDSIVLSNFIIGFKGKKYDVYNQTFKKLKLPKLQAVHLDRSNRYNLQVIQNNELRSIPLSNDTSEKYVVTNPTPPFMPTLNMEIAYKIEDRATEYAFISEFTLDTLTIPKNNIKDIYFLKNRKKKIVTDTEIYIIAELTNGNFNLFDFRKPNTNLLVSMSEIEHIGGFIRFKKDNLYGYFKIHTKGRYIKLDHFQGFFARFELPNGKKGWLDRNGKEYLNL
>NZ_CP019288.1|WP_160129691.1|2835935_2836904_+|arsenosugar-biosynthesis-arsenite-methyltransferase-ArsM
MSYLDTTHDVYKEAALTPDVGLCCTTNPIWELPGLKIPRIMQEMNYGCGSTVHARDLTNNPTMLYVGVGGGMELLQFAYFNRQKNGVIGLDVVDEMLEASRKNFEEAEAQNDWFKSEFVDLRKGDALNLPVDDNSIDVAAQNCLFNIFKTEDLKKAIAEMYRVLKPNGKLVMSDPTCEQPMNETLRNDDRLRALCLSGSLPIAEYVKMLTDAGFGTIEIRARKPYRILDPKNYPTDELIYIESIEVAAIKDPMPADGPCIFTGKAAIYFGAENHFDDEKGHILVKNQPIAICDKTAGDLASLGRDDVFISDSTYHYDGGGCC
>NZ_CP019288.1|WP_160129690.1|2834785_2835598_+|purine-nucleoside-phosphorylase
MLKHITETTEYLVNKGFDKPEIGIVLGTGLGKLIDDIEIIAEVHYNNIPHFPLATVEFHTGKLVYGMLAGKKVIVMQGRFHLYEGYDFIDITYPIRIMHKLGIKNLLVSNAAGAINLDYKKGDIMIIDDHINLQGGSPLAFKGVSQFGERFADMSAPYDAEMIAKVEEIAADKNIKIQKGVYASVVGPQLETRAEYRMLKIIGADAVGMSTVPEVIVANHLNVPCLAVSVLTDECDPENLAPVNIAEIIEIAGQTEPKMITLFSELIKTL
>NZ_CP019288.1|WP_160129689.1|2834149_2834764_+|DUF2064-domain-containing-protein
MRKNSTLLMTFTRNPELGKVKTRLAKGIGEKAALEVYIKLLEHTESVLRKIKTDKCIWYSVSVRENDLWSDKSYQKKKQIGTDLGERMLHAFQDAFQNNYEKVIIIGSDLFDLQPKHIEQAIEALDTNDVVIGPAQDGGYYLLGMKTLHEKAFVPKNWGTETVLADTLNDLDNQTIHLLETLNDIDHAEDLVPYETFKKYLHKK
>NZ_CP019288.1|WP_160129688.1|2833625_2834147_+|rhodanese-like-domain-containing-protein
MKNIFYIIILLCFAFANGQSALDSLLLKENKQSVPYITVAELVKKKNFVLLDSREKVEFETSHIKNASFVGYDKFKLKKIKNLLPKDKNEPIVVYCSLGIRSEDIAEKLQKAGYTNVYNLYGGIFEWKNKDNPVIDTKGNETENVHTFDENWSIWLKKGIKIYEKEKSKKDKQ
>NZ_CP019288.1|WP_160129687.1|2832391_2833447_+|arsenosugar-biosynthesis-radical-SAM-protein-ArsS
MATKSLQKRESELANSNRQLEILSNGIFQSGELPTFANKIKETNQFPLKPKTIEILQINLGYMCNQVCSHCHVDAGPDRKEIMTRETMQQCLDVIKKTGAHTLDLTGGAPEMNPDFRWFVEEASKVGVKDFIVRSNLTIIRANKKYYDLPEFFKKHNVHVVSSMPHWTRGKTDKQRGDGVFDKSIKALQELNAVGYGIPGSSLRLDLVYNPSGAFLPGDQVAMEKEFKKALFDDFDIQFHNLFAITNLPISRFLDYLIASENYEDYMYSLVEAFNPGAVANVMCTNTISVSWDGWLYDCDFNQMLDLKVASKSQHISEYNEEELSKRTIIISQHCYGCTAGAGSSCQGTVA
>NZ_CP019288.1|WP_160129686.1|2831914_2832250_+|carboxymuconolactone-decarboxylase-family-protein
MDKSYYDPRDLKKFGSITDWSEELGNKFFDYYGKVFEEGALTPREKSLIALAVAHTEQCPYCIDAYTKDGLQRGITKEEMMEAIHVGAAIKSGATLVHGVQMMNKVNKLEM
>NZ_CP019288.1|WP_160129697.1|2842078_2842582_-|sigma-70-family-RNA-polymerase-sigma-factor
MELTEQEFLKAIATHKGIIHKVSRIYFEDAIDREDLVQEIILQLWKSLKSFNGKSQFSSWMYRVALNTAIVFFKKEKRKPDSYKMPEHVQLTQEDYSNEKEEQLATFYKAVHQLNKIEKALIFQFIEGFSGEEIAKNLGMSPVNVRVKLNRTKKKIQEIIKEQSDGF
>NZ_CP019288.1|WP_160129698.1|2842864_2843716_-|TraB/GumN-family-protein
MKKLYILIAFVMCSFIGNAQDQKLENSVLWKIEHKDLAKPSYLLGTIHIMCEDDFSIPEKVTKAFNETENLVMEVDMSDTKALMESQKKMMSSGKLSEKLSKERQTYLDNLLQKELNISLQMVDNYSLMTVYSLLIQQGLPCTAKKMYEAELLMLAKAKNKRVAGLETLNGQLDFFAKAYPKDFLWQQIELNEEYKTLFQNMITFYKNEEISSIYDSMLDERFFNKNAEYWMLTFRNTNWIKLMPEMMQKQSNLFAVGAAHLPGENGVIELLRKQGYKVTPVH
>NZ_CP019288.1|WP_160129699.1|2843900_2844341_-|RidA-family-protein
MKSILSAFIFLLILISCQTNKKDITFHASHLAERQNTPFSDAVETENLLFLSGQIGKDHKKGVLVSGGIKAETKQVLENIKAVLAQHNSSLDRVVKCTVILADINDFKDFNSVYVQYFPNKPARTTFAVGGLAANAKIEIDVIAAK
>NZ_CP019288.1|WP_160129700.1|2844573_2845833_-|outer-membrane-protein-assembly-factor
MKTFFTILFLSLCFQGIAQNDVVADVKFQGQKKNKVGFLKKYVSVRNGDVLDSLQLEQDVVLLKRLAGVSHANYQVFLSEDNRYNVFFNIEENFTLIPNVNVWTTTNEQVAYKVGLYDYNFLGRNIAFGGFYQNNGFDSYGINLRMPNLFTRNFGIALNHQNWTSEEPLYFDEGSANYKYSNTSFEALLLYQINFKHRIQFGANVFSEKYNYLNGLTSDEIPQSLALDKFLLKFAYEYNNLDYEYQYIEGIKNTFYFQYVTSENSFQDNFLIGWSDFMYFKRVGEKGNWANRFRFGVASNSASPFAPFSVDNNLNIRGVGNLIDRGTASMVLNTEYRHTLYEKGWFILQGNTFIDVGTWRNPGGTFSDFANSENLRIYPGIGLRFIHKRIFNATFRIDYGYGITKDSSSGIVFGIGQYF
>NZ_CP019288.1|WP_160129701.1|2845837_2846842_-|glycoside-hydrolase
MKFRLLCIFFGLLQFSCTSQTKKINGVSFVAAPNEIDQTHVNPVVKVNANYAAIMPFGFMKQLTAPEVIHNTDRQWFGETRKGAKQYAELLQKNNIKIMIKPQIWVWNGEFTGFIAMESEETWKQFETSYESFILEYAHLAAEINAEMYCIGTELHKFVAARPAFWKELITKVKKVYKGKLTYAENWDSFDKVPFWSELDFIGVDAYFPLSEEKTPTLETLQIGWQLHKNKMIALSKKLDRKVLFTEYGYRSMEYTAKEPWDSSRKGKVLNLKAQEIALQAMYNEFWKEDWFAGGFIWKWFHHYEKSGGLENHQFTPQNKPAENVVRENYKLHQ
>NZ_CP019288.1|WP_160129702.1|2846879_2847800_-|hypothetical-protein
MKTKNLFAIALTLLFTSVSFAQDSDDETTDEKSNIQEYTPSKLLKKGQWDIKFFNSIYTQTERTNAGSTSVDIPRETFFTNTTEIYTGISKNRRINIGFIFQVRSNTFGGAGALDVFKFEDNNSARSGLTTIAPSIRVQPFKNISNFSFTSSIYLPIFKDKANAPYLDKRSVFWETKFFYDKTFGQDKWQVFTQADFGFNFGEKREEADVDSNVGERFANNSLFLPLGVFLSYFPTQKSMVYLNTKQAFLIDLGNNFSQNSTSVGIGSKYQLNDVLNLEASFDKFVRGNSFQGLGQTFSIGLRAIF
>NZ_CP019288.1|WP_160129703.1|2848179_2849520_+|FAD-dependent-oxidoreductase
MEHIVIIGNGISGVTAARHIRKLSDKRITIVSAETDYFFSRTALMYVYMGHMKFEHTQPYENWFWEKNRIELKKGFVKQVKDASKELVFASGETMKYDKLIIATGSKPNKFGWAGQDLDGVMGMYHKQDLENLEKYAPNKEVCKRAVIVGGGLIGIELAEMLQSRDIPVTFLVREDSFWSGVLPAEESEMINRHIKEHHIDLRLGVNLQEIKSDESGKVKSIIIKETGEEIPCTVVGLTAGVTPNIDFLKDSNIELGRGVKVNRRLETNVKDIYAIGDCAEQHEAIDQRRPIEAVWYTGRMMGETLAQTLCGNPRDYNPGHWFNSAKFLDIEYQTYGWVWAQPKENEARFYWEHKGGKKCIHINYDKNTNEFIGINTFGIRMRHISFDKWLNEKRSVEYVLEHLANANFDPEFYKLHEKEIVAKFNQENNTNIQLKKKSWKRIFSH
>NZ_CP019288.1|WP_160129704.1|2849544_2851401_+|4Fe-4S-binding-protein
MKFIRIAGLYIFIGSVLLFIATLFMGNYTLSQTSIEKTFDGKDAKVTETFIAVAKENGVLDKTYNDQFSFINDVKGLFDKHNEKITQAVAEEKGITSTQTKKIINDATQGGSVSYTKDVLEKNLAEAEVTSLDKATNWMYSPKKTYDSAEAFQKDLKTKISEINKNKAKDFLLYDNKYARFNITERAATGIIADNKALFLFLTFGLGIIGSLMFIISRLFLKPIPGIKNNGIYLNNATNRGWVGIVVFGFLVSFYVLLYFHPYIISNWTNILDPVKSIFIENGSASQWFLYGILYTVSMTVMGIRMFIKYRHNQYQVVRTASVLFFQIIFAFLLVEILPLFDLPGVDLKNAWPLDYNFLTDWNVKNYLDSGHLGKFMFFWGFILSIVVVPLLVYIYGKRWYCSWVCGCGGLAETLGDPYRQLSDKRLIAWKIERWLLYPILIFAIVMTVVVGYNTYNIVVTPELANDHTFLGINAYAINEWYGFFIGSIFAGVIGTGFYPLLGNRTWCRFGCPLAAYMGLIQRFKSKFRITTNGGQCISCGNCSTYCEQGIDVRAYAQKGQNIVRASCVGCGVCSAVCPRGVLKLENGNDDGATRHEVPEVILGNDMDLFEMLEESKK
>NZ_CP019288.1|WP_160129705.1|2851625_2852312_+|glycosyltransferase
MIIKVIIPAYNEADSIANVIQEIPKNVSEIIVVSNNSTDNTEINAKAAGATVLKESQRGYGYACLKGMEYIFNQNEKPDILVFLDGDYSDYPEELTKIVAPIIEDNIDFVIGARVKSLRENGSMTPQQVFGNWLATFLMKLFFGAKFTDLGPFRAIKYDKLLNLNMEDKTYGWTVEMQLKALKQKLSYVEVPVKYKKRIGVSKVSGTVKGSIFAGVKILGWIFKYSFK
>NZ_CP019288.1|WP_160129706.1|2852312_2853818_+|glycosyltransferase
MEFDAEFFKLALSFFIMAIYSIALILILLYSLAQLNLLVNYLRAKKNVDTSPRFDLNKSNEVPYVTIQLPVYNELYVMERLLDNIAEIDYPTEKLEIQVLDDSTDESVISTAAQIKRLQAKGLDITHICRKDRTGFKAGALKDGLVAAKGDFIAIFDADFLPKEDWLKQTIPYFKDKKIGVVQTRWGHINRDYSLLTKIQAFALDAHFTLEQVGRNSQGHFINFNGTAGIWRKTCIIDAGNWEGDTLTEDLDLSYRAQLKNWKFKYLEDVETPAELPVVISAARTQQFRWNKGGAENFRKMFKRVIFSKNISLKTKIHGVLHLLNSTMFLNVLIVGVLSIPMLYIKNTYGHLEIYFTVSSFFIISTIIFFVCFWFPFKRVQGGGFMNFVDYIKMFFTFFSVAMGFSVHNSIAVMEGHLGKKSEFVRTPKFNIKTLKDSWKNNKYIKKNVSGNTIIEAILMVYFLFGMYSAYPLNDFGLFPFHLMLFLGFAFVFFNSIRSKA

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Crispr_ID: NZ_CP019288_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_10

2876618-2879465

TypeII

Consensus_repeat	Method
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CRISPRCasFinder
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	PILER-CR
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	PILER-CR

36 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP019288_10

>merge|NZ_CP019288|10|2876618-2879465|CRISPRCasFinder,PILER-CR,PILER-CR
GATTCAGAGTACTCTCAAATTGTATTTTTACGTGAGGAATCACAAGCACAAAAAGTGCTGGAGCATTACGTGAGACGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATCAATCACTTGATCTTATGTCAGTCGATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGCACTTAAAATAATGGATAATGAGTACGCCCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAAAAATCACTAAAATAATGAGCGATATTATGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGAAAAGCTTTAGAGGCTGCCGAAGTAGATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTCTCAATATCTCAATGTATCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGATGGATATAGATGGACAATCGAGAACAGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGCTATACAAAGAACAAAAAGCACACGTTTTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGAAGCACAGGATAAACTGTTTGAGGAATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGAGATGATGAAGAATAATAAGGTAGCGATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATTATGATAATGGTGTGCAGACAGGGATTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTAATATGGAGGGGTTGGCTGTTAAGACTTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATTTGGTTCTTCTATGACTGACGAGCAGGCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGAAAGACACTTCAAAAGTGGACGTTCCCAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAAAGATGAGCAAAAGGAACTTGATGATATTGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTTTTTATTGGTGCTTTATCTTTTGAAAGTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTTTCATTGCGAATTATGTAAACCGCTACGGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTTAAATTGTGTGAAGTATTAGAAGTAGAACGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGTTTGGTGGATATAATGTTATTAACTCCGCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGCAATATTTGTGTCGTTGTTCTCATTACCTTGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTACATGCCAATTACCAACAGGGTTACCCGTGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTAAAAGTACCGCTTAATCGAATACTAAACAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATACATGATAGAGGAACTGATGCAGAAGGTGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAATCATATAAATCTGACGGTGTTTCCAGATGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATTCAAGCCAAAACTTAACTCGCCGATTTGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGCGTAGCTTAGGTTTGCGCCAGCTTCATAACGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATGAGTGTGAATTTGTGCAAGTAGGAGGGCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTCTGTATAAGGTTGCCAAGTGTGTTTTGCGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGACGGTGGTATAATTGCTTTTATTAGTAGAGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAAAAAATAACGTTCATTTGTCCAACAACGGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGTCGTTTTCAATATCCATTGATAATATCTGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAAGTTTTAAGTTCTGCATTTAACCAACCTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGACAGGCATGTAAAGCTTTGATTGATAAGGAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGTAAATATTAAAAATAGAGTCTCTTTTGGATGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAAATTAATAAATTCCTGTCAAAAGATATTAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGTTGCACTTAGGAATCAACTCGTATCTGGGGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGATAATGTCGTCACGCATTGGACATGTTAGCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG

>NZ_CP019288|10|10|2876618-2879465|CRISPRCasFinder
GATTCAGAGTACTCTCAAATTGTATTTTTACGTGAGGAATCACAAG	CACAAAAAGTGCTGGAGCATTACGTGAGAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATCAATCACTTGATCTTATGTCAGTCGATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CACTTAAAATAATGGATAATGAGTACGCCC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAATCACTAAAATAATGAGCGATATTAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GAAAAGCTTTAGAGGCTGCCGAAGTAGATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTCAATATCTCAATGTATCGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGATGGATATAGATGGACAATCGAGAACAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CTATACAAAGAACAAAAAGCACACGTTTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGAAGCACAGGATAAACTGTTTGAGGAATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GAGATGATGAAGAATAATAAGGTAGCGATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTATGATAATGGTGTGCAGACAGGGATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAATATGGAGGGGTTGGCTGTTAAGACTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTTGGTTCTTCTATGACTGACGAGCAGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGAAAGACACTTCAAAAGTGGACGTTCCCA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAGATGAGCAAAAGGAACTTGATGATATT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTTTATTGGTGCTTTATCTTTTGAAAGTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTCATTGCGAATTATGTAAACCGCTACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTAAATTGTGTGAAGTATTAGAAGTAGAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTTGGTGGATATAATGTTATTAACTCCGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CAATATTTGTGTCGTTGTTCTCATTACCTT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TACATGCCAATTACCAACAGGGTTACCCGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAAAGTACCGCTTAATCGAATACTAAACA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATACATGATAGAGGAACTGATGCAGAAGGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AATCATATAAATCTGACGGTGTTTCCAGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTCAAGCCAAAACTTAACTCGCCGATTTG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CGTAGCTTAGGTTTGCGCCAGCTTCATAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATGAGTGTGAATTTGTGCAAGTAGGAGGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTGTATAAGGTTGCCAAGTGTGTTTTGCG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACGGTGGTATAATTGCTTTTATTAGTAGAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAAATAACGTTCATTTGTCCAACAACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGTCGTTTTCAATATCCATTGATAATATCT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAGTTTTAAGTTCTGCATTTAACCAACCTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACAGGCATGTAAAGCTTTGATTGATAAGGA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAATATTAAAAATAGAGTCTCTTTTGGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAATTAATAAATTCCTGTCAAAAGATATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTGCACTTAGGAATCAACTCGTATCTGGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATAATGTCGTCACGCATTGGACATGTTAGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG

>NZ_CP019288|10|1|2876770-2877261|PILER-CR
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CACTTAAAATAATGGATAATGAGTACGCCC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAATCACTAAAATAATGAGCGATATTAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GAAAAGCTTTAGAGGCTGCCGAAGTAGATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTCAATATCTCAATGTATC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGATGGATATAGATGGACAATCGAGAACAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CTATACAAAGAACAAAAAGCACACGTTTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGAAGCACAGGATAAACTGTTTGAGGAATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGAGATGATGAAGAATAATAAGGTAGCGATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTATGATAATGGTGTGCAGACAGGGATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAATATGGAGGGGTTGGCTGTTAAGACTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTTGGTTCTTCTATGACTGACGAGCAGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGAAAGACACTTCAAAAGTGGACGTTCCCA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAGATGAGCAAAAGGAACTTGATGATATT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTTTATTGGTGCTTTATCTTTTGAAAGTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTCATTGCGAATTATGTAAACCGCTACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTAAATTGTGTGAAGTATTAGAAGTAGAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTTGGTGGATATAATGTTATTAACTCCGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CAATATTTGTGTCGTTGTTCTCATTACCTT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TACATGCCAATTACCAACAGGGTTACCCGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAAAGTACCGCTTAATCGAATACTAAACA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATACATGATAGAGGAACTGATGCAGAAGGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AATCATATAAATCTGACGGTGTTTCCAGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTCAAGCCAAAACTTAACTCGCCGATTTG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CGTAGCTTAGGTTTGCGCCAGCTTCATAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATGAGTGTGAATTTGTGCAAGTAGGAGGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTGTATAAGGTTGCCAAGTGTGTTTTGCG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACGGTGGTATAATTGCTTTTATTAGTAGAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAAATAACGTTCATTTGTCCAACAACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGTCGTTTTCAATATCCATTGATAATATCT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAGTTTTAAGTTCTGCATTTAACCAACCTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACAGGCATGTAAAGCTTTGATTGATAAGGA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAATATTAAAAATAGAGTCTCTTTTGGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAATTAATAAATTCCTGTCAAAAGATATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTGCACTTAGGAATCAACTCGTATCTGGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATAATGTCGTCACGCATTGGACATGTTAGC


>NZ_CP019288|10|2|2877368-2879465|PILER-CR
	CACTTAAAATAATGGATAATGAGTACGCCC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAATCACTAAAATAATGAGCGATATTAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GAAAAGCTTTAGAGGCTGCCGAAGTAGATA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTCAATATCTCAATGTATC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGATGGATATAGATGGACAATCGAGAACAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CTATACAAAGAACAAAAAGCACACGTTTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGAGAAGCACAGGATAAACTGTTTGAGGAATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAGGAGATGATGAAGAATAATAAGGTAGCGATAGTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTATGATAATGGTGTGCAGACAGGGATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAATATGGAGGGGTTGGCTGTTAAGACTTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTTGGTTCTTCTATGACTGACGAGCAGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGAAAGACACTTCAAAAGTGGACGTTCCCA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAGATGAGCAAAAGGAACTTGATGATATT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTTTATTGGTGCTTTATCTTTTGAAAGTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTTCATTGCGAATTATGTAAACCGCTACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TTAAATTGTGTGAAGTATTAGAAGTAGAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTTGGTGGATATAATGTTATTAACTCCGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CAATATTTGTGTCGTTGTTCTCATTACCTT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TACATGCCAATTACCAACAGGGTTACCCGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAAAGTACCGCTTAATCGAATACTAAACA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATACATGATAGAGGAACTGATGCAGAAGGT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AATCATATAAATCTGACGGTGTTTCCAGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATTCAAGCCAAAACTTAACTCGCCGATTTG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	CGTAGCTTAGGTTTGCGCCAGCTTCATAAC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATGAGTGTGAATTTGTGCAAGTAGGAGGGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TCTGTATAAGGTTGCCAAGTGTGTTTTGCG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACGGTGGTATAATTGCTTTTATTAGTAGAG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAAAAATAACGTTCATTTGTCCAACAACGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AGTCGTTTTCAATATCCATTGATAATATCT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAGTTTTAAGTTCTGCATTTAACCAACCTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ACAGGCATGTAAAGCTTTGATTGATAAGGA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	TAAATATTAAAAATAGAGTCTCTTTTGGAT
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	AAATTAATAAATTCCTGTCAAAAGATATTA
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	GTTGCACTTAGGAATCAACTCGTATCTGGG
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG	ATAATGTCGTCACGCATTGGACATGTTAGC
GTTGTGAATTGCTTTCAAATTGTATTTTTACGTGAGGAATCACAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160129724.1\|2870497_2871220_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|236956
NZ_CP019288.1\|WP_160129732.1\|2887072_2888338_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129725.1\|2871232_2872294_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019288.1\|WP_170293848.1\|2885917_2886067_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131913.1\|2867831_2868617_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129735.1\|2889410_2889965_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129734.1\|2888994_2889372_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129722.1\|2869389_2870130_+\|23S-rRNA-pseudouridine(2604)-synthase-RluF	unknown	unknown	gnl\|CDD\|236698
NZ_CP019288.1\|WP_160129733.1\|2888341_2888734_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236512
NZ_CP019288.1\|WP_160129729.1\|2879932_2880823_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP019288.1\|WP_160129720.1\|2866280_2867492_-\|aminoacetone-oxidase-family-FAD-binding-enzyme	unknown	unknown	gnl\|CDD\|272992
NZ_CP019288.1\|WP_160129726.1\|2872373_2873774_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP019288.1\|WP_160129721.1\|2868693_2869332_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|119384
NZ_CP019288.1\|WP_160129731.1\|2886162_2887068_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129736.1\|2889975_2890182_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129719.1\|2864842_2865925_-\|diphosphomevalonate-decarboxylase	unknown	unknown	gnl\|CDD\|225941
NZ_CP019288.1\|WP_160129728.1\|2879575_2879920_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP019288.1\|WP_160129723.1\|2870233_2870446_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160129727.1\|2874041_2875391_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271181
NZ_CP019288.1\|WP_160129730.1\|2880834_2885232_-\|CRISPR-associated-protein-Csn1	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160129724.1\|2870497_2871220_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	gnl\|CDD\|236956	PRK11697, PRK11697, two-component system response regulator BtsR.	1.61904e-51
NZ_CP019288.1\|WP_160129725.1\|2871232_2872294_-\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	8.09179e-44
NZ_CP019288.1\|WP_160129722.1\|2869389_2870130_+\|23S-rRNA-pseudouridine(2604)-synthase-RluF	gnl\|CDD\|236698	PRK10475, PRK10475, 23S rRNA pseudouridine(2604) synthase RluF.	8.76352e-112
NZ_CP019288.1\|WP_160129733.1\|2888341_2888734_-\|hypothetical-protein	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	0.000108267
NZ_CP019288.1\|WP_160129729.1\|2879932_2880823_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.56256e-99
NZ_CP019288.1\|WP_160129720.1\|2866280_2867492_-\|aminoacetone-oxidase-family-FAD-binding-enzyme	gnl\|CDD\|272992	TIGR00275, TIGR00275, flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae. [Unknown function, Enzymes of unknown specificity].	2.71213e-163
NZ_CP019288.1\|WP_160129726.1\|2872373_2873774_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	3.11329e-10
NZ_CP019288.1\|WP_160129721.1\|2868693_2869332_+\|hypothetical-protein	gnl\|CDD\|119384	cd06524, GH25_YegX-like, YegX is an uncharacterized bacterial protein with a glycosyl hydrolase family 25 (GH25) catalytic domain that is similar in sequence to the CH-type (Chalaropsis-type) lysozymes of the GH25 family of endolysins.	7.40802e-72
NZ_CP019288.1\|WP_160129719.1\|2864842_2865925_-\|diphosphomevalonate-decarboxylase	gnl\|CDD\|225941	COG3407, MVD1, Mevalonate pyrophosphate decarboxylase [Lipid metabolism].	5.52177e-58
NZ_CP019288.1\|WP_160129728.1\|2879575_2879920_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.02802e-31
NZ_CP019288.1\|WP_160129727.1\|2874041_2875391_-\|hypothetical-protein	gnl\|CDD\|271181	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase. Lambda-type integrases catalyze site-specific integration and excision of temperate bacteriophages and other mobile genetic elements to and from the bacterial host chromosome. They are tyrosine-based site-specific recombinase and belong to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The phage lambda integrase can bridge two different and well-separated DNA sequences called arm- and core-sites. The C-terminal domain binds, cleaves and re-ligates DNA strands at the core-sites, while the N-terminal domain is largely responsible for high-affinity binding to the arm-type sites.	4.09283e-08
NZ_CP019288.1\|WP_160129730.1\|2880834_2885232_-\|CRISPR-associated-protein-Csn1	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	2.13242e-48

>NZ_CP019288.1|WP_160129727.1|2874041_2875391_-|hypothetical-protein
MAKRKHMPNNKHKGLFIYCHVCKKHFSWTRKTTLRNSKTVKEEPTCGETGKNYSICKNFEKHRYKSRLHVPGSDGRKASRTHDATNYADAVIQAIDFEKEFKSELQGLGQPIEIRNRHYLFDVQLRYIDFLDNIDVPEHQKNTLSDGRKNEIVNCLKIFNEALAKHNINKKLFIVNRINDMHVGLFHDYLLVDKNYKGNTYNGKMSALKAFLSWAIDRFNIDMKNPFEKVRMIPVIVKRDTITKEEFKNLLKIIKPENGIEIQGKYKRNRYKLYLKDALELGLHTGGRREEVVGLKWNMIREKDGEPVYIEVPNLKVKRKKGERFNTDVPPKIIPVTKSLKNILYRLRYDINKGKDRYILNPDKRTDSSIKSMNDALSLGFSHFYKQLSTGRELQFKCLRKTYLTYLSSTLKGDAKRLSSHATDTVLKKHYIDERIVDKAIKELDIFED
>NZ_CP019288.1|WP_160129726.1|2872373_2873774_-|alpha/beta-fold-hydrolase
MQLTTIFRLVFKLAFFLATVIASAQEISGTWKGELKIQGMELPLAFNISETDGTYTTTMDSPMQNAFGIPTNGTTFKDNELIILQTQSGIEYTATFTDETFKGIFKQGGQEYPLDLIKGEKNVKKDKPQEPKKPYPYVSEEVTFKNATAGNIKFAGTLTLPKDVKNPPVVILITGSGAQNRDQELLGHKTFLVLSDHLTRQGIAVLRYDDRGTAKSEGDFSVATSFDFASDVEAAMTYLQTRNDVVDVNKIGLVGHSEGGLIAPIVAARNKNVAFCVLLAGPGVSGKEILLTQGKKAAELEDYPASDIAISQEISAKIYDICADYKGEASKEKIAALFQELKGKMTSEKAQRELTDTALKGQLKMITSPWMRAFLGYNPQTSLKKVTCPILAVNGEKDFQVLPALNLNAIEKGLKNNSDVTIKQFKDLNHLFQTSETGALSEYAKIEETFAPVALNYVSEWINARF
>NZ_CP019288.1|WP_160129725.1|2871232_2872294_-|histidine-kinase
MATSTKINTYTFWILQFLGWGFLTTANVWSKILIVPEEKSKAIYFFFEGLIFMFLAITLTTLFRNYLKRIDFIANQNSKNYGKAFVAYALIVLTFIVILIVSAHYMFIYINEKSAEISTLEIFLTGLNVSVFIFLWTIFYVGVKSLARLRKNKIDRLKLETALKDSQLNTLKGQLNPHFMFNSLNNIRGLMLEDVEKSREMLTRLSDMLRYSLNMDKVDAIQIEQELEIVDNYVALSKIQLEDRLQYSKQVDANLLQIKIPPMVLQMLVENAIKHGISNQKNGGKITLIVTDNNEKIILQVNNTGTLQTDTDSTRIGLNNIKKRLELLYGNEASFTLKEVENEVHAIIQIPVN
>NZ_CP019288.1|WP_160129724.1|2870497_2871220_-|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein
MENITAIIVEDSRLARNELKELLKKHPQIALVGEAENVDKAYELINETQPKVLFLDINMPEKNGFELLEMLDNVPLTIFTTAYDEYAIKSFEYNAFDYLLKPINQDRFSKTIEKVISTIEKETTDEKPFELHRQIFIKEGENCWLIQISEIAIFEIVGNYTRVYFESNKPLIYKSLNQIEAKLPAATFFRANRQQIINLTHVDKVIPWFNGKLKVTIKNSDQEIEISRRQSYKFKEILGF
>NZ_CP019288.1|WP_160129723.1|2870233_2870446_+|hypothetical-protein
MKKRNFKTLSLNKRSISNLKFTVIGGRANKTADVKDCPDNTLAKDCESLGACPDSFWCQASPVGSDEPVA
>NZ_CP019288.1|WP_160129722.1|2869389_2870130_+|23S-rRNA-pseudouridine(2604)-synthase-RluF
MSEPQLTRINKFLSEAGYCSRRAADKLIEQRRVTINGVVPEMGTKIAPDDEVHVDGKLISEPKEKPVYLAFNKPVGIVCTTDAKVEKDNIIDYINYPTRIFPIGRLDKPSEGLIFLTSDGDIVNKILRARNNHEKEYEVRVNRALTDDFIQKMGDGIPILGTLTRQCKVEKLTSFTFSIVLTQGLNRQIRRMCEYLDYNVVKLKRTRIMHISLDVPVGEWRHLTEEELQGIHDSTDDSSKTHLDKT
>NZ_CP019288.1|WP_160129721.1|2868693_2869332_+|hypothetical-protein
MSTQLKGIDISFNQGNLIDSIDTSNTDLSFVICKASGGITIQDPDFATNWKTIPEKGFIRGTYHFYYTNDAPQLQANNFFSVVGADFPSDALPPIVDFEGGSIKTENHSQIIEDLLSFLNIIQQKYNRIPVIYTNQNTGDSYLNDSRFSKYPLWVSNPTTASSPKMPSTWTDWIMWQYSFSGTINGTTVDEDYFNGDLNALKQFISQSSSSS
>NZ_CP019288.1|WP_160131913.1|2867831_2868617_+|hypothetical-protein
MKLVGNLPSDLQEVSGVETIPNSDKFWMVNDGGNHPRMYVVNATGKIEKTLQIEGKNEDWEDLTKDKAGNVYIGDFGNNNNRRKDLKIYILAANDLNHGKNILPSTIEFSFPNQKKFPPKKKDRYFDVESFFHLNGYLYLFTKSRVKKDYGRTNLYKIPAKSGKHEAEFISTFNSCEDFDCAITSAAISPNGKKVVLLSHETILQFTNFKDDDFLGGKMTKFDLDHKSQKEGICFKDNNTVYITDERSRGKGRNLYVFTLD
>NZ_CP019288.1|WP_160129720.1|2866280_2867492_-|aminoacetone-oxidase-family-FAD-binding-enzyme
MQTIDILIIGGGAAGFFTAINVAEKHPEKSVVILERGKDFLTKVRVSGGGRCNVTHACFDPKDLVKYYPRGEKEMLGPFHQFCCGDTMAWFEERGVELKIEDDGRIFPVSNSSQTIIDCFLSEAKKYKVDFRTNHAVKNISKVDELWQIETSQGMLEAENVVLTTGSNPKMWKMLETLGHSIVPAVPSLFTFNIKDARIKDLLGIATQASVKVVDTKLESNGPLLITHWGMSGPGILKLSAWGARILADKNYNFQIKVNWLDDVDKAACLENIKDFKIELAKKTVQKNNPFELPKRLWHRIINAAGIKDDTRWADLNKQQTEQLASQLTEAIFNVNGKSTFKEEFVTAGGIDLKEVNFKTFESRKQTNLYFAGEILNIDAITGGFNFQNAWTGSYIIANRIFD
>NZ_CP019288.1|WP_160129719.1|2864842_2865925_-|diphosphomevalonate-decarboxylase
MEIATFLPKKYTESIDNGSVTWKSPSNIALIKYWGKKEDQIPQNPSISFTLDACATVTTLTYKKREGNQDDFSFELFFEGKQKDDFKPKINTFLERILKYLPFLKNYHFTIETSNSFPHSSGIASSASGMSALALCFMSLEKELNPTMTEEDFNKKTSFLARLGSGSASRSIEGDLIVWGKHEDTIGSNDLFAIKYPYKVHEIFKNFHDTILLVDKGEKQVSSTVGHNLMHNHPFSQQRFAQAHENLTKMQSVLADGDLDQFIAIVESEALTLHAMMMTSMPYFILMKPNTLEIINRIWKFRQESGTHICFTLDAGANVHVLYPENEKDKVYPFIQQELVKFCQNGHHICDRIGFGAKKA
>NZ_CP019288.1|WP_160129728.1|2879575_2879920_-|CRISPR-associated-endonuclease-Cas2
MLSDTNRFNAYRIMWVLVFFDLPTETKKERRAASQFRKKLIDDGFTMFQFSIYLRHCPSRENAKVHTKRVKSILPKYGKVCILEITDKQFGNMELFHGVKPIEVPQPVQQLELF
>NZ_CP019288.1|WP_160129729.1|2879932_2880823_-|type-II-CRISPR-associated-endonuclease-Cas1
MIKRTIYIGSPAYLRLKQKQLVVENPEDKSIKGTVPIEDMALLMLDHYQITLSNQLLLKLQGNNVAVVSCDAHHLPFAMMLPLYGHTEHSDRIKHQLEASEPLKKQLWKQTIEQKIKNQQALLKMNDKPYEQMDLYWQHVKSGDTTNCEAKAAQHHWKYLFENFTRERFGNSPNNLLNFGYAVLRSIVARALVSSGLLPVLGIFHRNKYNPYCLADDIMEPYRPFVDKMVYNYISQYGVPEKLTKECKAYMLNIATQDVWIDGVERPLMVAVTTTTASLYKCYEGELRQIKYPTLD
>NZ_CP019288.1|WP_160129730.1|2880834_2885232_-|CRISPR-associated-protein-Csn1
MKKILGLDLGTNSIGWALTAQNFEQKQGQIIGVGSRIIPMSQDILGNFDAGQSHSQTAERTGYRSTRKLFQRNVLRRERLHRVLNILNFLPEHYVSAIDFEKHFGQFKNHTEVKLNYRKNEHGTHEFVFMDSFHEMIADFESHNKITKIPLDWTIYYLRKKALTQKITKEELSWILLNFNQKRGYYQLRGEEDTEDDKTKEFVSLKVKTVIDSGEEVKGNKLYDVIFENDWAYDRQTTKPSDWENKIKEFIVTTTILKNGEIKRTFKAVDSEKDWIAIKTKTQQDIDASNKTIGTYIYDTLRDNPIQKIRGKLIKTIERKYYKKELLTILQEQVKHHPELNDKKRYTACVEELYPRNEAHQQNIKGKDFSYLFLDDIIFYQRPLKSKKSTISNCAYEVRKYKKKVTLNGIEKEIVVHEPLKSISKSNPLFEEFRLWQFLRNLKIYKKENVDIDVTLQFFASEDDWIELYNFLSQKKEVEQKHIIQFLVSKKLIDKKEKDVFRWNYVEDKKYPAMPTKAQFISRLKKVVNSKDVSTFLSYETQYHLWHIIYSVKDKNEYEQALKKFANTYNLDEASFVENFAKFPPFKNEYGAYSEKAIKKLLPLMQIGKYWNEIKISNDTKKRIASIIERLETIDFDKEKIENIKDDDIPKQVLKSFLNFKNQNPLKGLNTYQACYAVYNRHSEASIITQWKTPNAIDKFLNDFKQHSLRNPIVEQVVTETLRVVKDIWNYYGSGNESFFDEIHVELGREMKNDKKKRERISKQNIENENTNQRIRNLLQELKNNGINDIKPYSPSQQEILKIYEEGVAQNPNVLYTKLSEQDVLKIRRNSSPTKNEISKYKLWLEQGYISPYTGKMIPLSKLFTTDYQIEHIIPQSRYFDNSMSNKVICESEVNQLKDNQTAFEFIKKHGTEKVDIGQGKHVSILSKENFETHCEKYFKSNRTKLKNLLSEEIPEGFINRQLNDSRYISKLIKGLLSNVVREDDEKEATSKHLLPVTGAITSKLKHDWGLYDKWNEIIAPRFQRMNDLTNSQDYGFWDDTINAYRIQVPEEIIKGFNKKRIDHRHHALDALVVACTHRKHIQYLNSLANENKKHELRKGLLIKNEQGNYTKHFISPWTTFTIDTKNTLEQTIVSFKQNVRVINKTNNKTWQWVLKEGNYKKELVKQTKGSNWAIRKPMHKESVYGEVKHIEVPKNKIATAIRTPLSAITKRKHIEAITDESIQKILENHLKNYTEENGKERFDLAFDANGIEELNKNIIVLNNGKNHHPIYKVRLYEIGSRFQISEDAKSPKSKKFVEAAKGTNLFFAMYWNKDKQKRVYETVPLNEVIEHQKQVANLPKEQRTLVPVNTKKGAFLFSLSPNDLVYVPTDEELENSSMINFSLLSKAQVNRIYKMVSSTGSECHFIKNQISSLIKKYDAKSKIGEFGSTNKSEKDIEGQMIKERCWKLQVDRLGNVTHILKNNP
>NZ_CP019288.1|WP_170293848.1|2885917_2886067_-|hypothetical-protein
MAVKHTPTGVVHSGSKGGTTGCGVDTTKHSDHWVSSSSRITCDKNGCKN
>NZ_CP019288.1|WP_160129731.1|2886162_2887068_-|hypothetical-protein
MKKIVLRLAAIVILCLVSCKEESKEDKKEVKTNTTKIVSAENKNLNISLLLDLSDRINPEKYPNSTMDFYKRDVAYIKSVSEAFITHLQNKKVRSINDKIQLYFDPEPGNQNINALSQSLRYEINRSNVSLDLLEEMKQAYATKPAKIYELAIKDNAYVGSDTWRFFKNKINDFCILEDHRNILIILTDGYIYHKNTQLKEDHLTSYLTPQLIRQNKLNDKNWKEKLTAQNFGFIAANENLAQLEILVLGINPDKKNPYEEDVIHKYWNDWFRQMKVGQSEIKTAILPSNMDKIIKDFILQ
>NZ_CP019288.1|WP_160129732.1|2887072_2888338_-|ABC-transporter-permease
MNSIKNLFKLKNKTASKLDEENTEEAREQIRITYYQSGYGSSIKASGGAITFGVGLKNLYNSFENLCRKQLNEQKILKQPYIEAQEKQQTELKKRETAISIYEDQKQKNIQNIDEHKYEMVNVKQSPEKYGIDTDKRPKAQFYIGLSLLLPITVYLFVFYISASYSAFFKNFESDSLTAAIFDGNALGKAVSDGWLEALFVGTIPFVFMGLGYLIHMFQKNKKAMSFVKLGALFILTFLFDIILAYSIEKKMFNFERVLGETFSLSIALESVNFWGIIFAGFVVYIIWGLVFDFVMKEHENVDKIRAFIRNKKEEIKNEVEKKNELVKKIDTIKHEITAINGSISELQSKINGFIFPVKEYLHYHYQYKEGWYQAINAEIALPSKEKNELKQRCEDVSNTHLQELQLKENMEYQHLVFTKN
>NZ_CP019288.1|WP_160129733.1|2888341_2888734_-|hypothetical-protein
MITNELKSHFLRLYQIAFVDDDFDILELQMLYRFAEERGISKEQLDHILLNPSHDASIPESLEERISYLYDLALMVWADKKVTEDEYITLKKYCRKFEFLEENITEIVDYLLDCAKKNVKKEVIINAINS
>NZ_CP019288.1|WP_160129734.1|2888994_2889372_-|hypothetical-protein
MKQLCYIVFTLFLLTTSNAVSQTVYTTKTGEKYHKSYCKYLKYSKKEIKIDKAISLGYKACKVCKPTSKNTKVNDSISQTISSKPKHEKTTSTKRSSSVQCSGQTKSGRRCKRKTKNISGKCYQH
>NZ_CP019288.1|WP_160129735.1|2889410_2889965_-|hypothetical-protein
MKKLKNLKIVILLITVLTSTLVLSQTQESKESKMLDFVSKKGIIIKFEDFNLPSVKSTYSNCESKIRKIISGSEIKYFLQISNKGKYNSVTSSIAYEDIVEIQKALVALQTQAAQDILTKADYLENKFISDDRLQIGYYVNKNKIVWYMKLDSGSDSTIFFKTYEPLVNAFKLGKEKIIFLKQQ
>NZ_CP019288.1|WP_160129736.1|2889975_2890182_-|hypothetical-protein
MKDYYVNKNAQSNGDHEVHESGCYWLPMEKNRIPLGKFYTCGGAVSTAKNHYDQVNGCKHCSEPCHTS

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Crispr_ID: NZ_CP019288_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_11

3232037-3232132

Orphan

Consensus_repeat	Method
AAATCAACATTCGTTAATCGTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_11

>merge|NZ_CP019288|11|3232037-3232132|CRISPRCasFinder
AAATCAAAAATCAACATTCGTTAATCGTTAATCTTATTGGGAGTTAGTCGTGAAGCAGAATTTAAAACTTCTTAAATCAACATTCGTTAATCGATA

>NZ_CP019288|11|11|3232037-3232132|CRISPRCasFinder
AAATCAAAAATCAACATTCGTTA	ATCGTTAATCTTATTGGGAGTTAGTCGTGAAGCAGAATTTAAAACTTCTT
AAATCAACATTCGTTAATCGATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160130017.1\|3236705_3239015_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|239802
NZ_CP019288.1\|WP_160130012.1\|3230803_3231076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130016.1\|3232981_3233881_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130009.1\|3225239_3226778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130013.1\|3231121_3231283_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_170293851.1\|3244138_3244630_-\|gliding-motility-lipoprotein-GldH	unknown	unknown	gnl\|CDD\|379474
NZ_CP019288.1\|WP_160130007.1\|3223658_3223823_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130022.1\|3244613_3245951_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP019288.1\|WP_160130011.1\|3228883_3230785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130005.1\|3219753_3221943_-\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|224684
NZ_CP019288.1\|WP_160130015.1\|3232220_3232937_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160131917.1\|3233958_3235785_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|239802
NZ_CP019288.1\|WP_160130019.1\|3240992_3241694_-\|3-oxoacid-CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|224702
NZ_CP019288.1\|WP_160130014.1\|3231285_3231699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130018.1\|3239309_3239966_-\|3-oxoacid-CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
NZ_CP019288.1\|WP_160130020.1\|3241768_3244120_-\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227342
NZ_CP019288.1\|WP_160130023.1\|3246051_3247083_-\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_CP019288.1\|WP_160130006.1\|3221935_3223618_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173809
NZ_CP019288.1\|WP_160130008.1\|3223956_3225090_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP019288.1\|WP_160130010.1\|3226790_3227273_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160130018.1\|3239309_3239966_-\|3-oxoacid-CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	5.65703e-121
NZ_CP019288.1\|WP_160130020.1\|3241768_3244120_-\|transglycosylase-domain-containing-protein	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	1.46318e-145
NZ_CP019288.1\|WP_160130023.1\|3246051_3247083_-\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	1.6359e-133
NZ_CP019288.1\|WP_160130017.1\|3236705_3239015_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|239802	cd04275, ZnMc_pappalysin_like, Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.	5.64634e-74
NZ_CP019288.1\|WP_160130022.1\|3244613_3245951_-\|hypothetical-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	4.05446e-49
NZ_CP019288.1\|WP_160130005.1\|3219753_3221943_-\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|224684	COG1770, PtrB, Protease II [Amino acid transport and metabolism].	8.02739e-96
NZ_CP019288.1\|WP_160130015.1\|3232220_3232937_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	3.77967e-12
NZ_CP019288.1\|WP_160131917.1\|3233958_3235785_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|239802	cd04275, ZnMc_pappalysin_like, Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.	6.84744e-75
NZ_CP019288.1\|WP_160130019.1\|3240992_3241694_-\|3-oxoacid-CoA-transferase-subunit-A	gnl\|CDD\|224702	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism].	4.23498e-115
NZ_CP019288.1\|WP_160130006.1\|3221935_3223618_-\|S8-family-serine-peptidase	gnl\|CDD\|173809	cd07483, Peptidases_S8_Subtilisin_Novo-like, Peptidase S8 family domain in Subtilisin_Novo-like proteins. Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin.. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	3.78572e-97
NZ_CP019288.1\|WP_160130008.1\|3223956_3225090_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.50798e-20
NZ_CP019288.1\|WP_170293851.1\|3244138_3244630_-\|gliding-motility-lipoprotein-GldH	gnl\|CDD\|379474	pfam14109, GldH_lipo, GldH lipoprotein. Members of this protein family are predicted lipoproteins, exclusive to the Bacteroidetes phylum. Proteins in this family are typically between 155 and 167 amino acids in length. Members include GldH, a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family may have gliding motility.	2.32646e-55

>NZ_CP019288.1|WP_160130014.1|3231285_3231699_+|hypothetical-protein
MKKILFTIFQILITIVFIGKISNWFLNYSDETNQILNVAMFTLIGIAYMYTGFIWDKKLIKTILIVCGLYLIVANFISDFYLKSIIGIVCILVPMLIIRFSHKEVDEEQLEEEIDKKHNWNLVDLTWSDIFSHKKKH
>NZ_CP019288.1|WP_160130013.1|3231121_3231283_+|hypothetical-protein
MENSTEAFSIAIAFIITVIVLGIKLVLKLFKLMDSQTMLNKERLKKLKNENSN
>NZ_CP019288.1|WP_160130012.1|3230803_3231076_+|hypothetical-protein
MKHFFNYWISVVVITFLLFISLSYNKLIDGGIGYIWIYLLFPLTIVFMIVTVTLLIKSDDKERLKKFLIKTILWILFLIIGTYTIRYIFL
>NZ_CP019288.1|WP_160130011.1|3228883_3230785_+|hypothetical-protein
MKTVRNLFRFLCILTLVVSLTNCQHDTVSETQQDEALQKEFPFKSSILSKQDVEANTKLSNQMRSLTTLQSSNLAESVYNETYNFTIDTDVVKFVESTENDLHSYTFPISRENNTSSALENLVFSYNATTDNYEASLVTYHFTASQQQEFLLTQHVRTPYEISYESIAVNLSDIVGETSLPCTTNYTEYHTTPDTGETFVHSSSIGNVNNECEHEDTSGNTSCTVYTIITTDCPVSGSTSGSPSSPSNSPTGGGNTTPNNDNDNDDRVITSPILSPSQIITDCMNGDSFNPLLSEEALNWLQENRSSSAAMSNYLKNVGCDESAQNFVEEAIEEMMANPNLTFEEYIEQQVEDILEANPFALLEIDCNQIDHWQTLAQHIPPQTVKDKIEGLHANHEAALGDWQIQSLEEAGGKVLNLDYFAVKVTTLPNNPVTGTQFNAQDFLVYFRKNINNFTNGSTFEPYCEIPSICQQETNLWNTTNILGAIVKLDIPAYNGVGGDTFGNDGVVVCSEFTNNYWNFMTMEAPYDYSHPVSGTRQFGFETNSDGSYNFYVRGVDRFNSRAQEIAAGIVFGDDIFSKADELWETVQEKLSIFINANGGGSTIVTPVTNRANWEKVKDVLQGKRPTSDLGCN
>NZ_CP019288.1|WP_160130010.1|3226790_3227273_+|hypothetical-protein
MKNLHYTKLILFCFLFIACGKQKTERLKADLTFRSVTFSSFYGATDERYESLVREMDSTLQNFKKEDGNVKLCRQFKKLQKLSLLRSPFIFLNIEKDSTITVYLDEKEYTKVKHIKHVDLFREGKKAVLELEVIEKEKGIYYSENIIAVKKVDGKSRSNI
>NZ_CP019288.1|WP_160130009.1|3225239_3226778_+|hypothetical-protein
MKFALVFAISSLLFNCQTDTNVDDIASIETGNNLAFKKERFQDLEKLTSYVEELKRNIKGSSLNKESSLGDAYNFIVIEDQDVLIYEEQTNTTYTIPIVKAEQEVGTFSNLVVKFSDTNQTEAFIINYVPNDGFLEASENYEQTPFSGSITKEHLQYDGSLDNLNENANPNCTTVTIMFCNWSEGSVEGTTHLAGRNCTPRYMFSFSYEACSDFPELVIPPSSSSSNQSTSSPSTSTSSGSNNNSNDNPIIIPTVPRIENTLDIDGITFDMNNWLNDNLYVKLELIKLLEEKPDAEDFILEVIEELIINQGLTLEEYRNSQIVFEGPEVLVPNIRDYLDCFSLLESAEITIYVDQPVPNTDDTWVSTGDIKAGHSFVKIKQGNVTRVFGLYPAGDADPIAPNDPHAFGNNEGYEFHVSITFSVSGGALQQIISNANNYNQNYDLNNNNCTDYAIQTAQSVGLTLPDPQKSWLGGGGSSPGAFGQALRNMQLPNGMTRNTTGGNASANSGDCN
>NZ_CP019288.1|WP_160130008.1|3223956_3225090_+|helix-turn-helix-domain-containing-protein
MFKDLNVNIYNLLIFAGIIQGIIFGIIVLTNKKYNNKASFSLACVMLLMSLSNLQYWLIDTKTIEKYTFIKFTYIPWHWLIMPFFYLFVYKYLQRKEKLDKKIKLYLFAPFFIVLSIVIVQLIYKFLINPNYELPSHFSRGIFIYLDILSILFIVSIIYMIFKMLKKYEIDNKEYDSLQVISETAWLKRLITIGLITCVFWIVAMAITVYSNEENLALFYFLWLGMSIIIYYLGYVGINKLQLIKERKKIRVTQTAKKIKKNLHDNKLDEIFENFTSIVSEKYTNPNLTLEEISKELNISSSYLSQKIKANSGENFSTYINALRIKKAKKMLINSEYKNYTTTAIGLEAGFNSKSSFYRAFKKNENCTPQQYINSQK
>NZ_CP019288.1|WP_160130007.1|3223658_3223823_-|hypothetical-protein
MSGFTSGYDWQYMSAAINKLENGTFSYDMSGVLHWYLFGIKIYSESKDFTGVIE
>NZ_CP019288.1|WP_160130006.1|3221935_3223618_-|S8-family-serine-peptidase
MKHFKFFIALLSCCLIIACASQQNKVSKTPQTVTAAFAKKQAFTKEEKKNWHLKDIFEDSIPGISLDKAYTFLKNKKSDTIIIALIDTELHIDHEDLKSQIWINKDEIPNNNIDDDNNGYIDDIHGWNFLQTTKKGAVLYANHSFIRIIKMYDSLFKDKEEIQIPESQKKEYKEYLRAIKTYNKEKKGVEDDITTYNRIKDKFIKADRLLTTYFPKKDYTIPQLDSLLQATTDSILKMRIGNMKYYLKNNMDVKWTDRGIKEENKKLNTWLSFTYDDRQNQRDNVDNLNDVPYGNNNVQGTLRGSHGTRVMSIIAATRNNDIGINGFSNSVKVMFLGVAPLGNEHDKDIALAIRYAVDNGAKIINMSIGKEFSMHPKWIEEAIKYAESKDVLIVSSAGNKSYDLNNEFDYPDDYKEDTEYVKNFVKVGASSYKADSTMVWLSSNYSTKNVDIFAPGHKIYCLSRNRTRYSSGTSLASAVVSGIASLIRSYYPNLSAIEVKDIILKSGISFDVDVVRPYPYGDKQDPKKIPFSSLSKSGKIVNAYNALLMAEEVSKKKKND
>NZ_CP019288.1|WP_160130005.1|3219753_3221943_-|prolyl-oligopeptidase-family-serine-peptidase
MIKKLTYIFLTTLLIISCSEEVYRGESIKGVNAVDTYHGIELNDPYRNLENLKDSTVLNWMKQQNDYAENIVANISGRNRLIEIQKRIDENKGHSAKQIRIIPSGQYFYLKKFAEEDVFNVYYRDSLHGEEKMIFNVNVYLKKNSKENYVINYIKPNWSGTKIALSFSEKGNEISEIVVFDRETNTILPNVYPNSAPASLEGIHWLSDDSGFMCSYLPYTDPTDENFWLDTKTFLYKIGNDKGKDIFSKNNNPELAINIEDFPTVYNYSNDDAYLFGEISGDSDYQDMYYMHESEINAEKTKWNLLFTKDEKISRFMVVGKDIIYLTAKNASNFKICKTALENPNFESPEVIITEREDAVISNFQITKDGFFYVSVKNGIEAKLFHVKDTTTKEINLPSTAGSISIGSFGTNHADLRIYTSGWTNPLMIYEYDVNKNNFSQSNIINSIFPDGFKDFTAEEIEIPSHDGTMLPVSLIYKKGMKKNSKNPTLFYSYGSYGSSLSPFFSTNFLLWVKEGGIIVMPHVRGGGEKGDAWHKAGMKTTKPNSWKDFIAAVEYMIANKYTSPDKTVIWGTSAGGIVVGRAMTERPDLFKAVLGFAPAMNMVRSEIQPNGLNSIKEFGTVKDSTEFRALLEMDSYHNIKKGEKYPAVLILAGLKDGRVVAWDPAKFVAKLLDSSTSKSPILFLVDSDAGHGGINLTENKLHVNYANMFSFAFWQTGHPDYKLDEESK
>NZ_CP019288.1|WP_160130015.1|3232220_3232937_+|helix-turn-helix-domain-containing-protein
MKSLKNISIQYCTFILFACFMCNTTVHANEQKEQNFEQTVDSLYAYQKQDVQIEQLLHTQEVFETRYYLSIGIVLLLVLIFGLLCARKTKGYNHLKKIIELLEKNKQNTGSDDKKSNETYIEINETIVNSILENLQAFERERGFLISKITLHQFAKQLKTNTKYLSKVINTYKLKSFRNYINDLRIQHSLQELENNTNYRKYTVKAMAKESGFGTTESFSKAFQKNTGETVSSFLRQF
>NZ_CP019288.1|WP_160130016.1|3232981_3233881_+|hypothetical-protein
MKYFILLCASLFIACSEKQEVNSLTIADNFVNHFFISDLHDLTAINAYMTSEYKRHYNFLSEEQRNVHEEYIRAMIDRLREELAENNHAYTLEKLEELYIEEFQKEILYKGTGDVFLLKSNDEFFGIIIVEGNKIYSFAGDLYLSPRGKILPYFFFKELNAQRIEADLTFMSITFSSLYGATDERYKSLVREIDSTLQNFDKEDGNVKLCRQFKKLQKHSLLRSPFIFLNIEKDSVITVYVSESAYEKVKHFKHADLYKEKKKVIVQLDIVEKEKGIFYAARIIEANKVDGRSRSNIHH
>NZ_CP019288.1|WP_160131917.1|3233958_3235785_-|T9SS-type-A-sorting-domain-containing-protein
MMKNITLLVLTLFCIGTIFAQERDCSTMENLEYRKQLDPQLEARMQQIEDFTRQRIQEAGSQESITGNIISIPVVVHVIYNNANENISQAQIQSQLDVLNEDFRRTNTDTSNRWSQAADTEIQFCLATVDPNGNPTIGITRKSSPTTAWGTNDAMKKSSEGGVDPWNTNQYLNMWVCNLGSGLLGYAQFPGGSAATDGVAMSPQYFGSSAKGTGFYLSAPFDLGRTTTHEVGHFLNLRHIWGDGGCGVDDFVSDTPASDGPNYGCDSTHVSCASTDMVQNYMDYSADACMNLYTAGQKARMRAILGTGGSRRSLALSDKCNSTTPPPPTPTCTDGVQNGDETGVDCGGSACAPCQIPGDTLLHEGYFESGLDGWSDGGSDCHRYKGKRSYEGKYSMRIRDNSGTSSAMTSEEFDLTGYDQVEFKFFFYPNSMENGEDFWIRYYNGSSWNTVATYTSGNDFTNRSYYAGIITLNSADVNFASNSQFRIQCDAGNNSDQVYIDQVTITGINGGTARATVDGLQLSRTGPQEPVSGDHLITPTITRGDITVNLISYNINSSYRILNLLGQTVKTGILKDGGRLNVSELKSGVYLLELSDEEERIIQKFVKQ
>NZ_CP019288.1|WP_160130017.1|3236705_3239015_-|T9SS-type-A-sorting-domain-containing-protein
MKNFTLLILAFLCMGAMVAQQRDCSTMDNLEYRKQLDPQLEARMQQIEEFTRQRIQEMGSQESITGNIITIPVVVHVIYNNANENISQAQIQSQLDVMNEDFRRTNTDADTRWSQAADTEIQFCLATVDPNGNATTGITRKSSSTTAWGTNDAMKKSSQGGVDPWNASEYLNMWVCNIGGGILGYAQFPGGSAATDGVVMGPQYFGSSAKGTGFYLSAPFDLGRTTTHEVGHYLNLRHIWGDGGCGVDDFVSDTPASDGANYGCDSTHVSCASTDMVQNYMDYSDDACMNLYTAGQKARMRAILDAGGSRRSLALSDKCGSAPTPTCTDGVQNGDETGVDCGGSSCAPCTIDPTCDDGIQNGDETGIDCGGSSCAPCQTACSDNEVTLTITFDQYPEETSWSIVTDGGTTVASTSYSAANADGSTVTETLCLPNDCYTFTINDAYGDGICCTYGSGSYTLTGPDGQIKSGGSFTSSEATDFCLGSTPPPTPTCDDGIQNGDETGIDCGGSSCAPCATGGTTTLHEGYFESGLDGWTDGGGDCYRYNGSRSYEGSYSMRLRDNSGTRSAMTSETFDLRGYDQVEFKLYFYPNSMENGEDFWIRYYNGSSWSTVATYASGSSFSNGNFYSATITLNSADVNFASNSQFRVQCDASANADQVYIDQVTVTGINGARATAESANSIQQLRTGPQGSVSGDFLMTPTITRGDITINLASYNVNSSYRVLNLLGQTVKAGTLKNGRLNVSELKSGVYLLEVSDEEEKIVQKFVKQ
>NZ_CP019288.1|WP_160130018.1|3239309_3239966_-|3-oxoacid-CoA-transferase-subunit-B
MLDKNGIAKRIAREVKEGYYVNLGIGIPTLVANFVRDDIEVEFQSENGVLGMGPFPFEGEEDADIINAGKQTITTLPGASFFDSAMSFAMIRGKHVDLTILGAMEVSENGDIANWKIPGKMVKGMGGAMDLVASAENIIVAMMHTNKRGESKLLKKCSLPLTGVGCVKKIVTNLAVLEITAKGFKLLERAPGVSVEEIKKATEGNLLVEGEIPEMQLA
>NZ_CP019288.1|WP_160130019.1|3240992_3241694_-|3-oxoacid-CoA-transferase-subunit-A
MINKKIDTVQQAVAGVKDNMTLMLGGFGLCGIPENAIAELVKLGVKNLTCISNNAGVDDFGLGFLLQQRQIKKMISSYVGENDEFERQMLSGELDVELTPQGTLAEKCRAAQAGFPAFYTPAGYGTEVAEGKESREFNGKMYILEKAYEADFAFVKAWKGDEAGNLIFKGTARNFNPCMCGAAKITVAEVEELVPVGELDPNQVHIPGIFVQRIFQGENYEKRIEQRTVRTKS
>NZ_CP019288.1|WP_160130020.1|3241768_3244120_-|transglycosylase-domain-containing-protein
MAKKQVKKEQENPSYAKKIIKWFWIVFAGGITSIFLLFLLASWGALGEMPSFEILENPQTNLASQILSSDGKILAKYYLNDNRTPVGYKELPKELVEALIATEDARFHNHSGIDVRGTIRAFAFLGSKGGASTISQQLARQLFVGEGSKNLPERLIQKIKEWVIATRLERQYTKEEIIAMYLNIYDYGNNADGIRSAARIYFGKEPKDLQIQESAMLVGMFKNSSLYNPRRNPEGVKNRRDVVLAQMYKYDYITEKTKDSLQKLPLALDYNPESHNEGLATYFREHLKGFLKTWISENPKAGGGKYNIYLDGLKIYTTIDSRMQQYAEESVEEHMTKLQAEFYHQNTKDRNKNAPFAKDVEQKSIDNVLNRAIENSERWKIMKKEGKSEKDILASFDKKTPMTLFSWTEKNNRIDTIMTPRDSILYSKFFLRASFMSLEPQTGQVKAWVGGINYRNFKYDMVKQGKRQIGSTFKPFVYATAIDQLHLSPCDSMPNGPFCIETGKYGLLEPWCPKNSNGDYEGMRTLKSALANSVNTVTARLMDRVGPANVRSLAQRLGVESEIPEVPSIALGTPDITLYEMLGAYGTFVNKGVYVKPVIVSRIEDKNGTVLYEFVPETKDVLSEEVAYTVVNLMEGVTQSGSGARLRSKGANKWNPMYDEIITGYPYEFKNPIAGKTGTTQNNSDGWFIGMVPNLISGAWVGGEDRQIRFERTKYGQGASMALPIWGLFMKKCYADESLTVSKDKFPEPDELTINVDCSKTTTKADDGTKNPNGNDKLDGIDF
>NZ_CP019288.1|WP_170293851.1|3244138_3244630_-|gliding-motility-lipoprotein-GldH
MQTQSKIAFFSCILCVTLFISCDGNRVFDQYETVGKSWDKDTSLTFKFQQPDSTNSYNLFVNVRNTNEYEFQNLFLIVNMNFPNGNVVTDTLEYEMATPKGEWLGTGFTTTKESKLWYKPNVRFPYKGMYEVEIQQAMRKINEPNGVQSLKGISEVGFRIEKK
>NZ_CP019288.1|WP_160130022.1|3244613_3245951_-|hypothetical-protein
MSCNSCSTGKDGQPRGCKSNGTCGTDSCNKLTVFNWLSNMSLPSSQEPFDCIEVRFKNSRKHFYRNTENLTLSIGDIVATEASPGHDVGIVTLTGELVRVQMKKKKVSVDSEEVKKVYRKASQKDIDVWSRSRDREEEIKKRARELAIALKLHMKISDVEFQGDASKATFYYTAEDRVDFRQLIKDMAKAFSIRIEMRQIGFRQEAARLGGIGSCGRELCCSTWLTDFRSVNTAAARYQQLSLNPQKLAGQCGKLKCCLNFELDAYLEALKQFPKSDVKLYTEKGTAVCQKTDIFKGHIWYAYEGEWMNWHKLTTDQANEIIAQNAKKEKVASLEEYAIELDEEDTKTDFENVVGQDSLTRFDKKPTRNRKKRGTQNKNRRPNTNPSNKTRSSVPAKRSSTAKSSTNEKSNDTTKNTSGTAKRSTGTANKNNNRRKKPNRNANPK
>NZ_CP019288.1|WP_160130023.1|3246051_3247083_-|rhodanese-related-sulfurtransferase
MQLYNKLSAKERAELIEKAGKDRMTISFYKYANIGNPEILRNHLFINWDNIDVLGRIYVSYEGINAQLSVPAENFNAFKEHIDTISFLENVRLNVAIEHNNMSFLKLKVKVRDKIVADGLEDTSFDVTEKGVHVGAEKFNELLDDENTILVDMRNHYESEIGHFQGAITPDVDTFRESLPIIEDDLSAHKEDKNLVMYCTGGIRCEKASAYFKHKGFKKVFQLEGGIINYARQVEAQELENKFIGKNFVFDHRKGERISDDVIANCHQCGNSCDEHVNCANEACHLLFIQCKSCAEKMDDCCSDQCKEVHNLPVEMQKELRKGKEVSNKIFKKGRSEVLKYKK

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Crispr_ID: NZ_CP019288_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_12

3237885-3237995

Orphan

Consensus_repeat	Method
ACATGGCGCACATGATGATCCACCACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_12

>merge|NZ_CP019288|12|3237885-3237995|CRISPRCasFinder
ACATGGCGCACATGATGATCCACCACAGTCAATTCCTGTTTCATCTCCATTTTGGATTCCATCATCACAAGTTGGGTCTATTGTACATGGCGCACATGACGATCCACCACA

>NZ_CP019288|12|12|3237885-3237995|CRISPRCasFinder
ACATGGCGCACATGATGATCCACCACA	GTCAATTCCTGTTTCATCTCCATTTTGGATTCCATCATCACAAGTTGGGTCTATTGT
ACATGGCGCACATGACGATCCACCACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160130018.1\|3239309_3239966_-\|3-oxoacid-CoA-transferase-subunit-B	unknown	unknown	gnl\|CDD\|188219
NZ_CP019288.1\|WP_160130012.1\|3230803_3231076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130016.1\|3232981_3233881_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130009.1\|3225239_3226778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130026.1\|3249855_3250275_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130013.1\|3231121_3231283_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_170293851.1\|3244138_3244630_-\|gliding-motility-lipoprotein-GldH	unknown	unknown	gnl\|CDD\|379474
NZ_CP019288.1\|WP_160130022.1\|3244613_3245951_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP019288.1\|WP_160130011.1\|3228883_3230785_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130015.1\|3232220_3232937_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160131917.1\|3233958_3235785_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|239802
NZ_CP019288.1\|WP_160130025.1\|3248598_3249600_+\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP019288.1\|WP_160130024.1\|3247323_3247986_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377495
NZ_CP019288.1\|WP_160130019.1\|3240992_3241694_-\|3-oxoacid-CoA-transferase-subunit-A	unknown	unknown	gnl\|CDD\|224702
NZ_CP019288.1\|WP_160130014.1\|3231285_3231699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130020.1\|3241768_3244120_-\|transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|227342
NZ_CP019288.1\|WP_160130023.1\|3246051_3247083_-\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_CP019288.1\|WP_160130008.1\|3223956_3225090_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP019288.1\|WP_160130010.1\|3226790_3227273_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130027.1\|3250302_3250842_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160130018.1\|3239309_3239966_-\|3-oxoacid-CoA-transferase-subunit-B	gnl\|CDD\|188219	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit. Various members of this family are characterized as the B subunits of succinyl-CoA:3-ketoacid-CoA transferase (EC 2.8.3.5), beta-ketoadipate:succinyl-CoA transferase (EC 2.8.3.6), acetyl-CoA:acetoacetate CoA transferase (EC 2.8.3.8), and butyrate-acetoacetate CoA-transferase (EC 2.8.3.9). This represents a very distinct clade with strong sequence conservation within the larger family defined by pfam01144. The A subunit represents a different clade in pfam01144.	5.65703e-121
NZ_CP019288.1\|WP_160130020.1\|3241768_3244120_-\|transglycosylase-domain-containing-protein	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	1.46318e-145
NZ_CP019288.1\|WP_160130022.1\|3244613_3245951_-\|hypothetical-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	4.05446e-49
NZ_CP019288.1\|WP_160130015.1\|3232220_3232937_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	3.77967e-12
NZ_CP019288.1\|WP_160131917.1\|3233958_3235785_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|239802	cd04275, ZnMc_pappalysin_like, Zinc-dependent metalloprotease, pappalysin_like subfamily. The pregnancy-associated plasma protein A (PAPP-A or pappalysin-1) cleaves insulin-like growth factor-binding proteins 4 and 5, thereby promoting cell growth by releasing bound growth factor. This model includes pappalysins and related metalloprotease domains from all three kingdoms of life. The three-dimensional structure of an archaeal representative, ulilysin, has been solved.	6.84744e-75
NZ_CP019288.1\|WP_160130025.1\|3248598_3249600_+\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP019288.1\|WP_160130024.1\|3247323_3247986_+\|hypothetical-protein	gnl\|CDD\|377495	pfam05257, CHAP, CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.	0.00114025
NZ_CP019288.1\|WP_160130019.1\|3240992_3241694_-\|3-oxoacid-CoA-transferase-subunit-A	gnl\|CDD\|224702	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism].	4.23498e-115
NZ_CP019288.1\|WP_160130023.1\|3246051_3247083_-\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	1.6359e-133
NZ_CP019288.1\|WP_160130008.1\|3223956_3225090_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.50798e-20
NZ_CP019288.1\|WP_170293851.1\|3244138_3244630_-\|gliding-motility-lipoprotein-GldH	gnl\|CDD\|379474	pfam14109, GldH_lipo, GldH lipoprotein. Members of this protein family are predicted lipoproteins, exclusive to the Bacteroidetes phylum. Proteins in this family are typically between 155 and 167 amino acids in length. Members include GldH, a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family may have gliding motility.	2.32646e-55
NZ_CP019288.1\|WP_160130027.1\|3250302_3250842_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	3.24925e-31

>NZ_CP019288.1|WP_160131917.1|3233958_3235785_-|T9SS-type-A-sorting-domain-containing-protein
MMKNITLLVLTLFCIGTIFAQERDCSTMENLEYRKQLDPQLEARMQQIEDFTRQRIQEAGSQESITGNIISIPVVVHVIYNNANENISQAQIQSQLDVLNEDFRRTNTDTSNRWSQAADTEIQFCLATVDPNGNPTIGITRKSSPTTAWGTNDAMKKSSEGGVDPWNTNQYLNMWVCNLGSGLLGYAQFPGGSAATDGVAMSPQYFGSSAKGTGFYLSAPFDLGRTTTHEVGHFLNLRHIWGDGGCGVDDFVSDTPASDGPNYGCDSTHVSCASTDMVQNYMDYSADACMNLYTAGQKARMRAILGTGGSRRSLALSDKCNSTTPPPPTPTCTDGVQNGDETGVDCGGSACAPCQIPGDTLLHEGYFESGLDGWSDGGSDCHRYKGKRSYEGKYSMRIRDNSGTSSAMTSEEFDLTGYDQVEFKFFFYPNSMENGEDFWIRYYNGSSWNTVATYTSGNDFTNRSYYAGIITLNSADVNFASNSQFRIQCDAGNNSDQVYIDQVTITGINGGTARATVDGLQLSRTGPQEPVSGDHLITPTITRGDITVNLISYNINSSYRILNLLGQTVKTGILKDGGRLNVSELKSGVYLLELSDEEERIIQKFVKQ
>NZ_CP019288.1|WP_160130016.1|3232981_3233881_+|hypothetical-protein
MKYFILLCASLFIACSEKQEVNSLTIADNFVNHFFISDLHDLTAINAYMTSEYKRHYNFLSEEQRNVHEEYIRAMIDRLREELAENNHAYTLEKLEELYIEEFQKEILYKGTGDVFLLKSNDEFFGIIIVEGNKIYSFAGDLYLSPRGKILPYFFFKELNAQRIEADLTFMSITFSSLYGATDERYKSLVREIDSTLQNFDKEDGNVKLCRQFKKLQKHSLLRSPFIFLNIEKDSVITVYVSESAYEKVKHFKHADLYKEKKKVIVQLDIVEKEKGIFYAARIIEANKVDGRSRSNIHH
>NZ_CP019288.1|WP_160130015.1|3232220_3232937_+|helix-turn-helix-domain-containing-protein
MKSLKNISIQYCTFILFACFMCNTTVHANEQKEQNFEQTVDSLYAYQKQDVQIEQLLHTQEVFETRYYLSIGIVLLLVLIFGLLCARKTKGYNHLKKIIELLEKNKQNTGSDDKKSNETYIEINETIVNSILENLQAFERERGFLISKITLHQFAKQLKTNTKYLSKVINTYKLKSFRNYINDLRIQHSLQELENNTNYRKYTVKAMAKESGFGTTESFSKAFQKNTGETVSSFLRQF
>NZ_CP019288.1|WP_160130014.1|3231285_3231699_+|hypothetical-protein
MKKILFTIFQILITIVFIGKISNWFLNYSDETNQILNVAMFTLIGIAYMYTGFIWDKKLIKTILIVCGLYLIVANFISDFYLKSIIGIVCILVPMLIIRFSHKEVDEEQLEEEIDKKHNWNLVDLTWSDIFSHKKKH
>NZ_CP019288.1|WP_160130013.1|3231121_3231283_+|hypothetical-protein
MENSTEAFSIAIAFIITVIVLGIKLVLKLFKLMDSQTMLNKERLKKLKNENSN
>NZ_CP019288.1|WP_160130012.1|3230803_3231076_+|hypothetical-protein
MKHFFNYWISVVVITFLLFISLSYNKLIDGGIGYIWIYLLFPLTIVFMIVTVTLLIKSDDKERLKKFLIKTILWILFLIIGTYTIRYIFL
>NZ_CP019288.1|WP_160130011.1|3228883_3230785_+|hypothetical-protein
MKTVRNLFRFLCILTLVVSLTNCQHDTVSETQQDEALQKEFPFKSSILSKQDVEANTKLSNQMRSLTTLQSSNLAESVYNETYNFTIDTDVVKFVESTENDLHSYTFPISRENNTSSALENLVFSYNATTDNYEASLVTYHFTASQQQEFLLTQHVRTPYEISYESIAVNLSDIVGETSLPCTTNYTEYHTTPDTGETFVHSSSIGNVNNECEHEDTSGNTSCTVYTIITTDCPVSGSTSGSPSSPSNSPTGGGNTTPNNDNDNDDRVITSPILSPSQIITDCMNGDSFNPLLSEEALNWLQENRSSSAAMSNYLKNVGCDESAQNFVEEAIEEMMANPNLTFEEYIEQQVEDILEANPFALLEIDCNQIDHWQTLAQHIPPQTVKDKIEGLHANHEAALGDWQIQSLEEAGGKVLNLDYFAVKVTTLPNNPVTGTQFNAQDFLVYFRKNINNFTNGSTFEPYCEIPSICQQETNLWNTTNILGAIVKLDIPAYNGVGGDTFGNDGVVVCSEFTNNYWNFMTMEAPYDYSHPVSGTRQFGFETNSDGSYNFYVRGVDRFNSRAQEIAAGIVFGDDIFSKADELWETVQEKLSIFINANGGGSTIVTPVTNRANWEKVKDVLQGKRPTSDLGCN
>NZ_CP019288.1|WP_160130010.1|3226790_3227273_+|hypothetical-protein
MKNLHYTKLILFCFLFIACGKQKTERLKADLTFRSVTFSSFYGATDERYESLVREMDSTLQNFKKEDGNVKLCRQFKKLQKLSLLRSPFIFLNIEKDSTITVYLDEKEYTKVKHIKHVDLFREGKKAVLELEVIEKEKGIYYSENIIAVKKVDGKSRSNI
>NZ_CP019288.1|WP_160130009.1|3225239_3226778_+|hypothetical-protein
MKFALVFAISSLLFNCQTDTNVDDIASIETGNNLAFKKERFQDLEKLTSYVEELKRNIKGSSLNKESSLGDAYNFIVIEDQDVLIYEEQTNTTYTIPIVKAEQEVGTFSNLVVKFSDTNQTEAFIINYVPNDGFLEASENYEQTPFSGSITKEHLQYDGSLDNLNENANPNCTTVTIMFCNWSEGSVEGTTHLAGRNCTPRYMFSFSYEACSDFPELVIPPSSSSSNQSTSSPSTSTSSGSNNNSNDNPIIIPTVPRIENTLDIDGITFDMNNWLNDNLYVKLELIKLLEEKPDAEDFILEVIEELIINQGLTLEEYRNSQIVFEGPEVLVPNIRDYLDCFSLLESAEITIYVDQPVPNTDDTWVSTGDIKAGHSFVKIKQGNVTRVFGLYPAGDADPIAPNDPHAFGNNEGYEFHVSITFSVSGGALQQIISNANNYNQNYDLNNNNCTDYAIQTAQSVGLTLPDPQKSWLGGGGSSPGAFGQALRNMQLPNGMTRNTTGGNASANSGDCN
>NZ_CP019288.1|WP_160130008.1|3223956_3225090_+|helix-turn-helix-domain-containing-protein
MFKDLNVNIYNLLIFAGIIQGIIFGIIVLTNKKYNNKASFSLACVMLLMSLSNLQYWLIDTKTIEKYTFIKFTYIPWHWLIMPFFYLFVYKYLQRKEKLDKKIKLYLFAPFFIVLSIVIVQLIYKFLINPNYELPSHFSRGIFIYLDILSILFIVSIIYMIFKMLKKYEIDNKEYDSLQVISETAWLKRLITIGLITCVFWIVAMAITVYSNEENLALFYFLWLGMSIIIYYLGYVGINKLQLIKERKKIRVTQTAKKIKKNLHDNKLDEIFENFTSIVSEKYTNPNLTLEEISKELNISSSYLSQKIKANSGENFSTYINALRIKKAKKMLINSEYKNYTTTAIGLEAGFNSKSSFYRAFKKNENCTPQQYINSQK
>NZ_CP019288.1|WP_160130018.1|3239309_3239966_-|3-oxoacid-CoA-transferase-subunit-B
MLDKNGIAKRIAREVKEGYYVNLGIGIPTLVANFVRDDIEVEFQSENGVLGMGPFPFEGEEDADIINAGKQTITTLPGASFFDSAMSFAMIRGKHVDLTILGAMEVSENGDIANWKIPGKMVKGMGGAMDLVASAENIIVAMMHTNKRGESKLLKKCSLPLTGVGCVKKIVTNLAVLEITAKGFKLLERAPGVSVEEIKKATEGNLLVEGEIPEMQLA
>NZ_CP019288.1|WP_160130019.1|3240992_3241694_-|3-oxoacid-CoA-transferase-subunit-A
MINKKIDTVQQAVAGVKDNMTLMLGGFGLCGIPENAIAELVKLGVKNLTCISNNAGVDDFGLGFLLQQRQIKKMISSYVGENDEFERQMLSGELDVELTPQGTLAEKCRAAQAGFPAFYTPAGYGTEVAEGKESREFNGKMYILEKAYEADFAFVKAWKGDEAGNLIFKGTARNFNPCMCGAAKITVAEVEELVPVGELDPNQVHIPGIFVQRIFQGENYEKRIEQRTVRTKS
>NZ_CP019288.1|WP_160130020.1|3241768_3244120_-|transglycosylase-domain-containing-protein
MAKKQVKKEQENPSYAKKIIKWFWIVFAGGITSIFLLFLLASWGALGEMPSFEILENPQTNLASQILSSDGKILAKYYLNDNRTPVGYKELPKELVEALIATEDARFHNHSGIDVRGTIRAFAFLGSKGGASTISQQLARQLFVGEGSKNLPERLIQKIKEWVIATRLERQYTKEEIIAMYLNIYDYGNNADGIRSAARIYFGKEPKDLQIQESAMLVGMFKNSSLYNPRRNPEGVKNRRDVVLAQMYKYDYITEKTKDSLQKLPLALDYNPESHNEGLATYFREHLKGFLKTWISENPKAGGGKYNIYLDGLKIYTTIDSRMQQYAEESVEEHMTKLQAEFYHQNTKDRNKNAPFAKDVEQKSIDNVLNRAIENSERWKIMKKEGKSEKDILASFDKKTPMTLFSWTEKNNRIDTIMTPRDSILYSKFFLRASFMSLEPQTGQVKAWVGGINYRNFKYDMVKQGKRQIGSTFKPFVYATAIDQLHLSPCDSMPNGPFCIETGKYGLLEPWCPKNSNGDYEGMRTLKSALANSVNTVTARLMDRVGPANVRSLAQRLGVESEIPEVPSIALGTPDITLYEMLGAYGTFVNKGVYVKPVIVSRIEDKNGTVLYEFVPETKDVLSEEVAYTVVNLMEGVTQSGSGARLRSKGANKWNPMYDEIITGYPYEFKNPIAGKTGTTQNNSDGWFIGMVPNLISGAWVGGEDRQIRFERTKYGQGASMALPIWGLFMKKCYADESLTVSKDKFPEPDELTINVDCSKTTTKADDGTKNPNGNDKLDGIDF
>NZ_CP019288.1|WP_170293851.1|3244138_3244630_-|gliding-motility-lipoprotein-GldH
MQTQSKIAFFSCILCVTLFISCDGNRVFDQYETVGKSWDKDTSLTFKFQQPDSTNSYNLFVNVRNTNEYEFQNLFLIVNMNFPNGNVVTDTLEYEMATPKGEWLGTGFTTTKESKLWYKPNVRFPYKGMYEVEIQQAMRKINEPNGVQSLKGISEVGFRIEKK
>NZ_CP019288.1|WP_160130022.1|3244613_3245951_-|hypothetical-protein
MSCNSCSTGKDGQPRGCKSNGTCGTDSCNKLTVFNWLSNMSLPSSQEPFDCIEVRFKNSRKHFYRNTENLTLSIGDIVATEASPGHDVGIVTLTGELVRVQMKKKKVSVDSEEVKKVYRKASQKDIDVWSRSRDREEEIKKRARELAIALKLHMKISDVEFQGDASKATFYYTAEDRVDFRQLIKDMAKAFSIRIEMRQIGFRQEAARLGGIGSCGRELCCSTWLTDFRSVNTAAARYQQLSLNPQKLAGQCGKLKCCLNFELDAYLEALKQFPKSDVKLYTEKGTAVCQKTDIFKGHIWYAYEGEWMNWHKLTTDQANEIIAQNAKKEKVASLEEYAIELDEEDTKTDFENVVGQDSLTRFDKKPTRNRKKRGTQNKNRRPNTNPSNKTRSSVPAKRSSTAKSSTNEKSNDTTKNTSGTAKRSTGTANKNNNRRKKPNRNANPK
>NZ_CP019288.1|WP_160130023.1|3246051_3247083_-|rhodanese-related-sulfurtransferase
MQLYNKLSAKERAELIEKAGKDRMTISFYKYANIGNPEILRNHLFINWDNIDVLGRIYVSYEGINAQLSVPAENFNAFKEHIDTISFLENVRLNVAIEHNNMSFLKLKVKVRDKIVADGLEDTSFDVTEKGVHVGAEKFNELLDDENTILVDMRNHYESEIGHFQGAITPDVDTFRESLPIIEDDLSAHKEDKNLVMYCTGGIRCEKASAYFKHKGFKKVFQLEGGIINYARQVEAQELENKFIGKNFVFDHRKGERISDDVIANCHQCGNSCDEHVNCANEACHLLFIQCKSCAEKMDDCCSDQCKEVHNLPVEMQKELRKGKEVSNKIFKKGRSEVLKYKK
>NZ_CP019288.1|WP_160130024.1|3247323_3247986_+|hypothetical-protein
MKINKMILGVGTFLVATFLFINCSSDTIAAVESENETTINFEYYRIDLSKSFTDLSDDERFKDLTNEQILAIMDYYSPGEESLTEADCNNCVYHVRSFDNRLMPVNSGCNITYKWTNTGCLGGKKKLINSCTPAVGSAIIMDTGISAGHVAYIESVVLINPNPVQYSIKINEGNRPSGVCRTIWISSTDNNVVGYQNPNIGINCNNAPFSTCSTPYSSCN
>NZ_CP019288.1|WP_160130025.1|3248598_3249600_+|recombinase-RecA
MSSEKEAKLKALKLTLDKLDKTYGKGTVMKMSDQPIVDIDAISSGSLGLDIALGVGGYPRGRVVEIYGPESSGKTTLTLHAIAEAQKAGGIAAFIDAEHAFDRFYAENLGVDIDNLIISQPDHGEQALEITDNLIRSGAIDIVVIDSVAALTPKSEIEGEMGDSKMGLHARLMSQALRKLTASISKTNCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRLDIRRSTQIKTTDGEVMGNKTRVKVVKNKVAPPFKMVEFDIMYGKGISKVGEILDIGVNYEIIKKSGSWFSYGDSKLGQGRDAVKILLQDNPELLEELEIKIKAAIANS
>NZ_CP019288.1|WP_160130026.1|3249855_3250275_+|hypothetical-protein
MKKIVFLVSLVCVTLFNSCSVDDSAADFQIEFIPIETVEIPTEFNFGETHIITVTYKRPTTCHSFSSFQYVPEDNNVRNVAVINFVTLGSDCETLEDDFQSKSFSFSVLDTNSYTFKFWQGKDDNGQDMYLIYEVPVTN
>NZ_CP019288.1|WP_160130027.1|3250302_3250842_+|sigma-70-family-RNA-polymerase-sigma-factor
MSLEQLIHKCKNNNRDAQAQLYSLYVKKLYATSLKYSRNKLEAEDNLQDSFMVIFEKISQYNFKGSFEGWLRRITVNTVLQKYRSKGVFEVINERVLEERPVTVYEEDVSLDFLLSIVQELPDRYRLVFNLYVLDDYSHQEIAEMLGISQGTSKSNLARARMILKTKVETFKKKIAINE

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Crispr_ID: NZ_CP019288_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_13

3755311-3755684

Orphan

Consensus_repeat	Method
AATATCGAATATCGAATAAGAAATAATGAATGTTGAAGTTTTTTAATTT	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP019288_13

>merge|NZ_CP019288|13|3755311-3755684|PILER-CR
AATATCGAATATCGAATAAGAAATATCGAATTTTGAAGTTTTTTAATTTGTCATTGCGAGTAAGCGAAGCAATCTGCCTCTTGATTTTTTCAATTTTGTTTGAAACTAAAAAAATATCGAATATCGAATAAGAAATAATGAATGTTGAAGTTTCGTAGTGGATCATATCACATCAAGCTAAATTCAAATAAACAAACAACAAACAACAAACAACAAACAAAATATCGAATAAGAAATAAAGAATGTTGAAGTTTTTTAATTTGTCATTGCGAGTAAGCGAAGCAATCTGCCTCTTGATTTTTTCAATTTTGTTTGAAACTAAAAAAATATCGAATATCGAATAAGAAATAATGAATGTTGAAGTTTTTTAATTT

>NZ_CP019288|13|3|3755311-3755684|PILER-CR
AATATCGAATATCGAATAAGAAATATCGAATTTTGAAGTTTTTTAATTT	GTCATTGCGAGTAAGCGAAGCAATCTGCCTCTTGATTTTTTCAATTTTGTTTGAAACTAAAAA
AATATCGAATATCGAATAAGAAATAATGAATGTTGAAGTTTCGTAGTGG	ATCATATCACATCAAGCTAAATTCAAATAAACAAACAACAAACAACAAACAACAAACAAAATATCGA
ATAAGAAATAAAGAATGTTGAAGTTTTTTAATTTGTCATTGCGAGTAAG	CGAAGCAATCTGCCTCTTGATTTTTTCAATTTTGTTTGAAACTAAAAAAATATCGAATATCGA
ATAAGAAATAATGAATGTTGAAGTTTTTTAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160130407.1\|3755718_3756678_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187580
NZ_CP019288.1\|WP_160130416.1\|3765140_3765473_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|273179
NZ_CP019288.1\|WP_160130408.1\|3756881_3757517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130412.1\|3762880_3763351_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341392
NZ_CP019288.1\|WP_160130413.1\|3763357_3764047_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130401.1\|3743456_3744674_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271201
NZ_CP019288.1\|WP_160130404.1\|3746322_3749955_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP019288.1\|WP_160130400.1\|3741190_3743446_-\|lantibiotic-dehydratase	unknown	unknown	gnl\|CDD\|377403
NZ_CP019288.1\|WP_160130414.1\|3764069_3764420_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130406.1\|3752476_3755230_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_CP019288.1\|WP_160130397.1\|3737608_3737872_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130410.1\|3758135_3760193_+\|M13-family-peptidase	unknown	unknown	gnl\|CDD\|341056
NZ_CP019288.1\|WP_160130415.1\|3764422_3764956_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP019288.1\|WP_160130405.1\|3750058_3751384_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173799
NZ_CP019288.1\|WP_160130399.1\|3740292_3741198_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274836
NZ_CP019288.1\|WP_160130403.1\|3745620_3746178_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP019288.1\|WP_160130409.1\|3757520_3758039_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|379209
NZ_CP019288.1\|WP_160130398.1\|3737960_3739688_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160130402.1\|3744811_3745624_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274197
NZ_CP019288.1\|WP_160130411.1\|3760475_3762758_-\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349872

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160130416.1\|3765140_3765473_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|273179	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb). All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair].	1.31059e-35
NZ_CP019288.1\|WP_160130412.1\|3762880_3763351_+\|CBS-domain-containing-protein	gnl\|CDD\|341392	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	2.16262e-57
NZ_CP019288.1\|WP_160130401.1\|3743456_3744674_-\|hypothetical-protein	gnl\|CDD\|271201	cd04793, LanC, Cyclases involved in the biosynthesis of lantibiotics. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthinoine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as precursor peptides and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans) in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. Also contains SpaC (the cyclase involved in the biosynthesis of subtilin), NisC, and homologs.	5.51764e-66
NZ_CP019288.1\|WP_160130404.1\|3746322_3749955_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.73322e-10
NZ_CP019288.1\|WP_160130400.1\|3741190_3743446_-\|lantibiotic-dehydratase	gnl\|CDD\|377403	pfam04738, Lant_dehydr_N, Lantibiotic dehydratase, C-terminus. Lantibiotics are ribosomally synthesized antimicrobial agents derived from ribosomally synthesized peptides. They are produced by bacteria of the Firmicutes phylum, and include mutacin, subtilin, and nisin. Lantibiotic peptides contain thioether bridges termed lanthionines that are thought to be generated by dehydration of serine and threonine residues followed by addition of cysteine residues. This family constitutes the N-terminus of the enzyme proposed to catalyze the dehydration step, via glutamylation of the substrate during lantibiotic biosynthesis. The enzyme dehydrates Ser/Thr residues in the precursor by glutamylation.	0
NZ_CP019288.1\|WP_160130415.1\|3764422_3764956_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	4.90445e-37
NZ_CP019288.1\|WP_160130406.1\|3752476_3755230_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	1.62479e-50
NZ_CP019288.1\|WP_160130407.1\|3755718_3756678_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187580	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs. This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.67753e-166
NZ_CP019288.1\|WP_160130410.1\|3758135_3760193_+\|M13-family-peptidase	gnl\|CDD\|341056	cd08662, M13, Peptidase family M13 includes neprilysin and endothelin-converting enzyme I. The M13 family of metallopeptidases includes neprilysin (neutral endopeptidase, NEP, enkephalinase, CD10, CALLA, EC 3.4.24.11), endothelin-converting enzyme I (ECE-1, EC 3.4.24.71), erythrocyte surface antigen KELL (ECE-3), phosphate-regulating gene on the X chromosome (PHEX), soluble secreted endopeptidase (SEP), and damage-induced neuronal endopeptidase (DINE)/X-converting enzyme (XCE). Proteins in this family fulfill a broad range of physiological roles due to the greater variation in the active site's S2' subsite allowing substrate specificity. NEP is expressed in a variety of tissues including kidney and brain, and is involved in many physiological and pathological processes, including blood pressure and inflammatory response. It degrades a wide array of substrates such as substance P, enkephalins, cholecystokinin, neurotensin and somatostatin. It is an important enzyme in the regulation of amyloid-beta (Abeta) protein that forms amyloid plaques that are associated with Alzeimers disease (AD). ECE-1 catalyzes the final rate-limiting step in the biosynthesis of endothelins via post-translational conversion of the biologically inactive big endothelins. Like NEP, it also hydrolyzes bradykinin, substance P, neurotensin, and Abeta. Endothelin-1 overproduction has been implicated in various diseases including stroke, asthma, hypertension, and cardiac and renal failure. Kell is a homolog of NEP and constitutes a major antigen on human erythrocytes; it preferentially cleaves big endothelin-3 to produce bioactive endothelin-3, but is also known to cleave substance P and neurokinin A. PHEX forms a complex interaction with fibroblast growth factor 23 (FGF23) and matrix extracellular phosphoglycoprotein, causing bone mineralization. A loss-of-function mutation in PHEX disrupts this interaction leading to hypophosphatemic rickets; X-linked hypophosphatemic (XLH) rickets is the most common form of metabolic rickets. ECEL1 is a brain metalloprotease which plays a critical role in the nervous regulation of the respiratory system, while DINE is abundantly expressed in the hypothalamus and its expression responds to nerve injury. A majority of these M13 proteases are prime therapeutic targets for selective inhibition.	0
NZ_CP019288.1\|WP_160130405.1\|3750058_3751384_+\|S8-family-serine-peptidase	gnl\|CDD\|173799	cd07473, Peptidases_S8_Subtilisin_like, Peptidase S8 family domain in Subtilisin-like proteins. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	6.04477e-37
NZ_CP019288.1\|WP_160130399.1\|3740292_3741198_-\|hypothetical-protein	gnl\|CDD\|274836	TIGR03891, lantibiotic_dehydratase, thiopeptide-type bacteriocin biosynthesis domain. This domain occurs within longer proteins that contain lantibiotic dehydratase domains (see pfam04737 and pfam04738), and as single-domain proteins in bacteriocin biosynthesis genomic contexts. Three named genes in this family, SioK in Streptomyces sioyaensis, TsrD in Streptomyces laurentii, and NosD in Streptomyces actuosus, all occur in regions associated with thiopeptide biosynthesis. [Cellular processes, Toxin production and resistance].	1.26592e-89
NZ_CP019288.1\|WP_160130403.1\|3745620_3746178_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	5.55629e-15
NZ_CP019288.1\|WP_160130409.1\|3757520_3758039_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|379209	pfam13474, SnoaL_3, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	4.18747e-40
NZ_CP019288.1\|WP_160130398.1\|3737960_3739688_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	6.6039e-10
NZ_CP019288.1\|WP_160130402.1\|3744811_3745624_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274197	TIGR02552, Low_calcium_response_locus_protein_H, type III secretion low calcium response chaperone LcrH/SycD. Genes in this family are found in type III secretion operons. LcrH, from Yersinia is believed to have a regulatory function in the low-calcium response of the secretion system. The same protein is also known as SycD (SYC = Specific Yop Chaperone) for its chaperone role. In Pseudomonas, where the homolog is known as PcrH, the chaperone role has been demonstrated and the regulatory role appears to be absent. ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array.	4.2558e-07
NZ_CP019288.1\|WP_160130411.1\|3760475_3762758_-\|M28-family-peptidase	gnl\|CDD\|349872	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1. Peptidase family M28; Endoplasmic reticulum metallopeptidase 1 (ERMP1; Felix-ina, FXNA or Fxna peptidase; KIAA1815) subfamily. ERMP1 is a multi-pass membrane protein located in the endoplasmic reticulum membrane. In humans, Fxna may play a crucial role in processing proteins required for the organization of somatic cells and oocytes into discrete follicular structures, although which proteins are hydrolyzed has not yet been determined. Another member of this subfamily is the 24-kDa vacuolar protein (VP24) which is probably involved in the formation of intravacuolar pigmented globules (cyanoplasts) in highly anthocyanin-containing vacuoles; however, the biological function of the C-terminal region which includes the putative transmembrane metallopeptidase domain is unknown.	1.0356e-84

>NZ_CP019288.1|WP_160130406.1|3752476_3755230_+|CHAT-domain-containing-protein
MITSFKRIHKFSLLIFFLLSVFVLQAQEIELCKYYNQQIEKEELTLSEEESLVDSLLLIKNIKIDTMKLVQIYSGFIKAEGLSQLKKIISYADKIEHLALNLNDSSLEIFKKNRRNRIVFLSRDQQFYKALKAGDNYLERYPEVDKSNDRVYRSLGNSYSGLGDFQKAIANYDEAIYLSKSFKNNKELVRTYICKLETLVDLNDLSYSKQILKIEIELKEFQETNEISYKNSFALYLNLGVFNDKTNNDFQKAISNYKKSLEISLQENDTINIIKSYVNLGGVYKNNKQFDEAKKYLFQAKEITIDFSFLASMISNNLADIYQKENNHKKALVHYQKAIVQALQSKEIEYQKLPTLEDIEFSPNKLDVLGYLIDKANGWVAYYDAEQNPEYLQNALETFTLADQLIDIIYVESREDLSKLFWRKKGATFYPKAVEVCYRLQQPEKAFFFMEKNKAMLLLENMTNATAKRLSKLPENTLEREQNLIKEIKTLEAEIQASTKTQTIDSLKNSVFKYKKEYTAFIDSLETEFPKYYNYKKNIKIVTLQNVQSTLQKDELVLQYIVGKEKGFVALISSEKIQLKELPTTKTLTKTVTQYKEAVSKPFVNTEDKNTYQEVAKKLYQQLIPFGNSEIELAEKRITIIADGILQYIPFEALLTSENEYLIQNTEIHYNYSLSSAAQSQQNNSPISKTFIAIAPTKFKNDQFNALATSEEELDKLTDIFNAMHFQYEKATKQRFTEAYGNYKIIHLSTHGGIDNTIPWMAFYDEKMTLDELYFTKNQSELVVLSACKTSDGELKKGEGVMSLARGFFNAGAKSVVSSLWDINEKASNDIIQEFYKNIAAGDTKSSALQKAKLTYIKNNKNTSEASPYYWSALTITGDVTPIHITQNSYLYYLLGGFFLTGIIMYIRFKSSNKQAA
>NZ_CP019288.1|WP_160130405.1|3750058_3751384_+|S8-family-serine-peptidase
MKKVFVNCCALLLMTFISCQKETINTEGTETVKESEITQKGDGSASNAEVGNELVILYPDGTTEAEKILKRAEYNIEEFKKCECADPNLELWVFSKREAGGGGLEDKRATAKSDEEIEGAEFNPNIKISETMFVDFAGIGSPSDGIAKRVASNQGVTVAVLDTGIMYDYEGFTTPFLYNSDQNGCNDNGYTELFGWNFVDENNNPYDNHQGRHGTIVTQLIASKFEAANVNYQILPVKVASETGNIRYFDALCGFQFAANKPDVDIINMSFGWYHHERELLEKFIIDVEDRILVVTSAGNKGTNNDMTTHYPSSYEVDNILAIAGLGSGGTPSNTPSSYYDAVVLNPNGSSSNSNSGLASFSNRGTMSVDIAAPSEQIPFIYNNETFYVDGTSYSAALTSGYSGTLHLNGMTGIALRAKVLENSVYNANLSEIQYSSHIPD
>NZ_CP019288.1|WP_160130404.1|3746322_3749955_+|T9SS-type-A-sorting-domain-containing-protein
MKKIILSMFCLFLASSFTGIFAQQQSLQQQRIEKVEQQVQEFTKKNMQNVPQEQLTTFKNSFELGEHGFSFNDLSPEEEKEYVDNFKKNYLRVEYFKNHPEAWTPYQAEMAPICDNGGFEDGNFDNYEGQSAIGSQGGYNGSPNGECSALPTSGFGGFSWTPTTLNSTTNNDNFTLVSSGNDPIVATGGGTLSMINPNSPDPNNSRAVRINSARPLPSTGSCSPNRGINRLIKPITLTEDGIQTVRFYYALVAEFPNHTNRNPIFVARALDGNNAELDRLCVISNPAGNPFFTRFTPNPYPCATNQVDILWQNWTCAELEISGNAGDVINLEFIVADCGFGAHFGYAYVDDICVEACQPGDNFQGSIQLNDLDPCEVTLPFDVCADFILPQLNGQTGTLSANDTSLEILQNGAVVETLTNGVITGNTICFSVDAADFDTQTGGYDFQVNAEFTIGGGTQTADDVHTIPGQDNDYIFNNPDCCDIAATVANIVCYDQGSTDPSDDTWSIELTVTNSAGTTWNATTPNADSGGYGNATLIDMGNISDFPGAFTFLVADDGDPSCSTTVTVEAPKPCSPPCDLEATVVVGECNDNGTPSDYSDDFYNVTITVSGTNGLPWMVKKKLESNGLETVIHNGTGDVVDLELGPFDVSDGDWTLWVSLTDYTDCLIDTFITVPNCCNDEPYIIPYWQHPACPEVVCTADQWPIHVLSSDGSTITNGNGITIVWDNLDTPADENDIQDWIYASAEENWQATITYPNGCEYIITYYEDCCDEDIFIRVLECPSDGQLQSYQTALEKAMEAASASQSASVESEAQNSSQAQQAQIQNELDRLRTYKEARANSSGDECDPCELGYVFIQLVDANGDEIDIDDYDTFSWNNGSMVTNALFDLPMEDGPACFTATKIEYGKECVYQDCFFYECEEECLCDELTLGDLTVFEVNECLYSISASSIVNCSSDQIASEEYSFTINNGTPITSTGNGIYHTFTANGDYDITMRWTVVDTEGCETTVSISETVKIDCIKDPDPCKVPTNLHYDCRRANLTWTGDANTSYIVEVNWDDPACCRGGANPTSQRWDVTGTSFQLPYINQSGCFSWRVGVKCKDEIVWSALACGSCDTKPHEPGTSSVKTVAKITPNPNDGNMNIEISGNDKTPFTLKVYRFDGTLIKTFNENRIENQSIKISWNGKSVLNQGMYFFVITTDTETITKKVIIE
>NZ_CP019288.1|WP_160130403.1|3745620_3746178_-|sigma-70-family-RNA-polymerase-sigma-factor
MSNDAYFIEGLRTGRETVLQEIYDQFFSKVRTFVIQNKGNTTDAEDVFHNALIQLYIRLKNRQLTINSSFEAYLFTTCKNLWRRELNKKRVTKTLVVELEDKETENAFALLEQEQWELYIQKFQLLSENCRKVLTLLFNGTSYDEIVETFSYSSKVVARQRVFKCKAKLTKLIKEDAKFSKIKKL
>NZ_CP019288.1|WP_160130402.1|3744811_3745624_-|tetratricopeptide-repeat-protein
MNFDDQTYEQVASYLNNEMDKAEKTAFEALLKNDTELASFVETFSTLDSVYNEDTWTIKSNASIEDVKALANEFRGDDVVDLSKKIRAIQQHTTQETSTKNRKSYFYYISSAVAIAAVCSLFYFSFTQSITANDAFEQYHDWNTLPSFQTKSAAENNLAKASKLFQEKKYQEALTIFTEYEKENNTYNPQIQLYIGVSQLELENYQEAIQTFNTLKNSNTIDAHKAYWYTALTYLKQNDAENAKKVLNSLVQISGNYNYEKAKKLLKKLK
>NZ_CP019288.1|WP_160130401.1|3743456_3744674_-|hypothetical-protein
MNKELLEEKLKEIDLIIKSKYKEESQIGVLAGLAGVSLFEFYYSKYLDIDDHADIGVEMLTDCIDKINEGYSYPTFCTGIAGAGWVLDHLEQEEFMDADNDDLLPELDQYIHTFMVTDMKNGNYDFLHGAIGYAFYFLNRYRNTKSDELKDKYKTILNEFIDLLEDMSEDAGDGKTKWISELSIETKEKGYNLSLSHGMSSIVGILTKLHVYDDFKAKSEPMLKGAINYIMSHKTDDMEAFSIFPSWITDNKEDENGQSRLAWCYGDLGVAMRFWFASKTLNDKALGDTALAVLKHSAARIKQEDSLVRDAGLCHGSYGNAQMFLRMYKETGDKEFKDAFEFWIQDGIDRGTHKEGYAGYMQWKGVDKSWAPETSLLEGIAGIGLSILDYLADYDTNWDECLMIS
>NZ_CP019288.1|WP_160130400.1|3741190_3743446_-|lantibiotic-dehydratase
MSKNPYKNFSKYILRTPLFSFTSYQKLTSKQEISEEDFRTVCTNPIVREALFLASPSLFEEIDRWLAGEMDDAKKEQKLRYSILKYISRMSSRCTPFGLFAGCSVGEFGEETEIQLKGSDQNKRHTRLDMNYLVALSQDLVTNKKIREQLLFFPNSSIYKAGPQLRYIEYKYFNSRRHHHIVAVDDTEYLAIVLEKASHGASLSQLASLLVDDEITMEEATEFIEELVSSQLLISELEPSVSGPEFLDQICNVLERLQGVESILAALKEADKKINKIDQSIGNNPKVYLELSEFLQELDTDFELKFMFQTDMVLQNTKNTLSTTVIDDIQKGYALLNRLTFPQTTTTLTKFKDAFHERFEEREVPLSTALDVEIGIGYKQDQGAGDVNPLVDNIMIPGRQSKHPIMEVRWSSINSYFQDKLIEAFKNDDYIIKIDAADFKDYDLNWDDLPDTMSCMIEILEDKNGEQKIKFSGGGGSSAANLLGRFCHGDPELFKYTQEMVDMEAEMNKDKILAEIVHLPESRVGNILMRPDLRKYEIPYLAKSIKDEEDQLPIDDLMVSVKNHSKVLLRSKKYNKEVVPHLTNAHNYSSNSLPIYHFLSDMQTQGIRSGVGFGLGPFANEYPFLPRVEFNNLILHDAAWNLKKSHIEPLLKAKKDNEKLSAEIKTLRDSLKIPQYVMLADGDNELLVNFGNLTSVRMLLDTVSKRGSFKLTEFLFSESGVVKEGNEYYTNQVIVSFYNEEKLTQSKQPNE
>NZ_CP019288.1|WP_160130399.1|3740292_3741198_-|hypothetical-protein
MNNEIQRNFILGDSWLYYKIYTGPKTCDAVLTEIIKPIAEQLIEDGIIDKWFFIRYADPKHHIRVRFHYAKPENVGHIINGLYPKFKEFIDQDLIYKIQIDTYQREIERYGSNTMELGEDLFYHDSKMMVDFIDMVEGDEGEELRWLFSIRAMDSHLTSYGYTDDEKLELMDRLKTGFGNEFGMSRPLKKQLDDKFRAERKKIEEFMVFTAEENPDYEPILDVLTAKEEGIVETVAGILKHNEDGTLLMPLNDLMGSYMHMLMNRLFKSKNRIHEMVCYDFLYRYYKSMIARKKHMNKAKK
>NZ_CP019288.1|WP_160130398.1|3737960_3739688_-|helix-turn-helix-domain-containing-protein
MHTKKPFFTAFHSIISVVLLLYSLSLNAQIDSLQGKSYEELEQLYKVERHNNPTLAKVYAEAIYQRSKKIKDEKKIAQSLYKKAMISYKLGIYDSAIYYTDASLTIGKQLSNDSLILQNYSLKGNIASTGGDYKTALDTYLLAKKVADKMGNLNDVLQISHNIGFIKKQTKDLVEAAAIFKENLSIIRKNNLKNLSRLEVASLAFLSDTYLRMKDYNSAETYTEEGLEIAKKSEYNDLYLYLNANKIIIQFQQQQYTKSIASSKSTIKSITDFGNDQSLTTPYLYIGKSYLKLKQYDSAIVYFKKFEDIINSTEVETPEIEEVYEFLAICYANIGEQQKSILYLNKYAALDKQNDSINMSINNNIHEKYDIVPLQEEIDSLDTKNQKQRKRATYLYIISAVLLVSLIGFFSWFKRKQHQNKIRFQQLLVTIEKLEQPKEKITPEVSSKETSNPVTDENALQILKALTIFEEKELYLRQDCTLGYVAKKAKTNTTYLSNVINTYKEKPFKSYLSELRINAALVKLKNDEKLRSYTIKAIAEEFGFKRSETFSRAFKAQTNVYPSYYIKSLQNQNDN
>NZ_CP019288.1|WP_160130397.1|3737608_3737872_-|hypothetical-protein
MKTLKLKKVKISKIGNPHILFGGAYEAHNAQNAHNPYDDDMYVSHPDNCGDTRLDGDCIPQTNGNTATLGNATDIVGVRNVDVGIRN
>NZ_CP019288.1|WP_160130407.1|3755718_3756678_-|NAD-dependent-epimerase/dehydratase-family-protein
MSTKVLIIGACGQIGTELTAVLRDTYGTANVVATDIRKSESNVCSGGTFEVLDARDKEAIRACIEKHEITDVYLMAAILSAAAEKNPELAWDLNMNSLLHVLNLAKDKIIKKIFWPSSIAVFGQNSPKKNTPQYTIMEPSTVYGISKLSGERWCEYYHKNFGVDIRSIRYPGIISWKANPGGGTTDYAVEIFHEAIKNGRYTCFLSEDTSLPMMYMDDAVRATLDLMNAEASNVKVRSSYNIAATSFTPKELTIAIQELLPDFTISYKPDFRQQIADSWPESIDDTVAKNDWDWSSRTDMKAIVSEMIMNLKKVLGSRF
>NZ_CP019288.1|WP_160130408.1|3756881_3757517_+|hypothetical-protein
MKKIIVSLLVIITFFACKKEQEATRSAETQSQEEYFAKNKLTIPKKAQLKELTPTQKKLVQDWLEFTAIHENIKLINASTRFAIAEDLGQLAANIDTLGFKKFPKELDVMQIRSRLLVLKTKALKLQDDATDDNVPNDFLEKEIAEMNKVFNAVCYQIEQTSELNILPEEILGNSLKKKDSTKVKIEEKKEQKPKMKLPKKPFKQIEPENN
>NZ_CP019288.1|WP_160130409.1|3757520_3758039_+|nuclear-transport-factor-2-family-protein
MKKLIVLSIITAFISCNTEKSRQKVEDFRLEKSKTEINIVLDAWHKAAADADFDAYFSKMTADAIFIGTDATENWENAAFKEFSKPYFDKGKAWSFTALERNVFISEYGDIAWFDELLDTQMELCRGSGVLKKVDDTWKISHYVLSIAIPNDNVPEVIKLKKENDSIVKSQL
>NZ_CP019288.1|WP_160130410.1|3758135_3760193_+|M13-family-peptidase
MKINLKLALCFTASALLFSCEDKKEEKKEVAVIPGINLDYMDTSVSPKDDFYTYVNGKWMETTEIPADRTSWGGFGVLRKDTDQDVLAILDEANKSGKYKATSDQGKALLIYNSILDTAARNKAGIKPLQPALDAIASIKNIADMQTVIAKNVATISAPFMGLTGFANLSDSSMNAAYVVPGSLGLPERDYYLDKDEKSQEIRQKYVAHITRMLQFLGDSEEKARKDAETILALETKLASPRLDKVESRDMRNFNNPRSVQELSEMTPAINWNKLMADLEMKKIDTIIVMQPGYMTALQEILTTASVEDMKTLMRWSTLNNSASQLTTELDKANWDFYSKELNGAKEQRKADERALATVNGTVGEAIGQLYVDAKFPPEAKEKAEKMITNVIEAYKERIMNLDWMSPETKEKAVEKLDKFTVKIGYPDKWEDYASLEVKEGNSYYDNMVAVGKWGYRKNLDEINEPVDKTEWGMSPQTVNAYFNPLNNEIVFPAAILQPPFYNYQADDAVNYGGIGAVIGHEISHAFDDSGARFDADGNLKNWWTEDDLTQFTKRGDALAAQYSAIEVLDSVYINGKYTLGENIGDLGGVLGAYDGLQRHIKENGRPDKIDGFTAEQRFFLSWATVWRTKMREEALRTRIKTDTHSPGQYRAYVPLQNIDAFYEAFDVKEGDKMYIAPENRVRIW
>NZ_CP019288.1|WP_160130411.1|3760475_3762758_-|M28-family-peptidase
MNTPKARFTFLSFLLIALAVYLSFYSVMPQETTEGKVPKTEFSTVRAFAHVNEIAKEPHYVGSKAHETVRNYIIAELKKLGLEPIIQEGFTLDNWGNISKPKNIIAQIKGKNSTKALLLLSHYDSDPHSAVGASDAASGVATILEGTRAFLAKSEQPENDIILLISDGEELGLNGAELFVNEHPWAKDVGLVLNFEARGSGGPSIMLLETNNGNAKLIKAFQNADTKYPVGNSLAYSIYKMLPNDTDLTVFREDGNIQGFNFAFIDDHFDYHTENDTPENLDFNTLTHQGSYLMPLLDYFSKQDLTQMTSADDLIYFNTPFGFHTYPFSWILPMLLLIVLLFIGVLIYGFKEKMLSGNGIMFGFIPFLVALIVSCAATVLGWMFINWIYPNYAEIQHGFTYNGYTYIFLFAFLSLGITFYSYHKFGKKITPANLTIAPLFFWIVITALAAFYLDGASFISIPVLLSLVSVFFLIKQQKKPSALFLTILAIPAVFILVPFLKLFPVGLGLKIIAVVALLIVLLIGLLMPVFGLYKRKKWTAYLFFLMAIVTFFIAHAKSDFSETRQKPNSLVYVLDADKNTANWNTYDGILDDWTKNYIKDESMTANAKEIMDSKYKGGFTYSQTAPVKSIPLPLFETTKDTIYNTIRHIDVTIIPQRNVNRIEVFGDGKRLETLQINGIMVEKIPNKRSKRLVTYYVSDNEPLVLSFTAKPTERIEFIIYEASFDLLENPLFSVPARAKNMMPRPFVLNDAVLVKKTIQF
>NZ_CP019288.1|WP_160130412.1|3762880_3763351_+|CBS-domain-containing-protein
MGIKSFQGARKVQANTTSKAEALKVSDYMTRNLITFKPEQTVEEVIQKLIQHKISGGPVVNDKNELIGMISEGDCIKQISDSRYYNMPFEQNKIEAHMVKNVETIDGNLDIFDAANKFIQSKRRRFPIVENGKLVGQISQKDILKAAMNLKGQNWK
>NZ_CP019288.1|WP_160130413.1|3763357_3764047_-|hypothetical-protein
MDYTNLIFPAMFIIGIATLIFLGIYYSPKHKILRQLKKTRRKNIQSVREHEYVKIVGNAKHVGKPLIAPLSKRECVYFEVIVKENKGKQWRNVIKDVQFQDFFIQTGTESAVLHLNARREFEKLIHLVTDHSFHSRVFNNTNAAIVQYLNEHGIKDKSIFGMNKPLQYQERIIEVNEEIAIMGIGNWQIIDTPMDSYSDGRILVLSGTKEQRLLVTDEPKAMKRVKRKL
>NZ_CP019288.1|WP_160130414.1|3764069_3764420_-|hypothetical-protein
MDKECLECNDTFKGRIDKKFCSDYCRNAYNNRLNKDGKNLIRNINNRLRKNWRILEDLNVNQKTKTTKGKLLEKGFDFNYFTSIYVTKAESTYYYVYDQGYLALENDYYLLVKKNS
>NZ_CP019288.1|WP_160130415.1|3764422_3764956_-|GNAT-family-N-acetyltransferase
MNIHLETDRLIIRDLTEQDVDGMFVLDSDPEVHTYLGNKPITQKAAALKYIRDVNLQYKQRGIGRWAVEMKETGEFIGWCGMRLYTDYTFNNHTNFHDIGYRIQRKFWGKGFATEASKACLEYAWNVLKLDKIYGITEKGNEASHKVLLKIGLNYLEDFHYEPEKMMLRWYSISKPE
>NZ_CP019288.1|WP_160130416.1|3765140_3765473_+|single-stranded-DNA-binding-protein
MNNLKNRVQLIGNLGNDPEIINLEGGKKIAKFSIATNESYKNAQGDKVENVYWHNLIAWNKTAEIAEKFLLKGKEVAIEGKLTNRSYETEAGEKKYVTEVIVNEILMFGK

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Crispr_ID: NZ_CP019288_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_14

3914924-3915028

Orphan

Consensus_repeat	Method
TCCTAACGAAATCGTTTCGCGGAAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_14

>merge|NZ_CP019288|14|3914924-3915028|CRISPRCasFinder
TCCTAACGAAATCGTTTCGCGGAAAGCTATTAAATAAGGATTTTCAGGAAAGAAATGCGTCAACATATCTAAAATACCTCCTAACGAAATCGTTTCGCGGAAAGC

>NZ_CP019288|14|13|3914924-3915028|CRISPRCasFinder
TCCTAACGAAATCGTTTCGCGGAAAGC	TATTAAATAAGGATTTTCAGGAAAGAAATGCGTCAACATATCTAAAATACC
TCCTAACGAAATCGTTTCGCGGAAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160130538.1\|3906686_3906845_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130533.1\|3898547_3900227_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378964
NZ_CP019288.1\|WP_160130550.1\|3925825_3926791_-\|succinylglutamate-desuccinylase/aspartoacylase-family-protein	unknown	unknown	gnl\|CDD\|349469
NZ_CP019288.1\|WP_160130540.1\|3907778_3911237_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|238084
NZ_CP019288.1\|WP_160130542.1\|3913622_3914846_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379523
NZ_CP019288.1\|WP_160130541.1\|3912074_3913364_+\|aminopeptidase-P-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|238520
NZ_CP019288.1\|WP_160130546.1\|3919756_3921013_+\|choice-of-anchor-B-family-protein	unknown	unknown	gnl\|CDD\|275117
NZ_CP019288.1\|WP_160130548.1\|3922407_3923166_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|188567
NZ_CP019288.1\|WP_160130545.1\|3918415_3919471_-\|thiamine-phosphate-kinase	unknown	unknown	gnl\|CDD\|100030
NZ_CP019288.1\|WP_160130551.1\|3926768_3927662_-\|RimK-family-alpha-L-glutamate-ligase	unknown	unknown	gnl\|CDD\|182468
NZ_CP019288.1\|WP_160130536.1\|3902673_3903369_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP019288.1\|WP_160130535.1\|3901123_3902578_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130537.1\|3903416_3906275_-\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|271234
NZ_CP019288.1\|WP_160130547.1\|3921019_3922405_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130544.1\|3916202_3916775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131943.1\|3916823_3917606_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP019288.1\|WP_160130549.1\|3923410_3925381_+\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP019288.1\|WP_160130539.1\|3906966_3907551_+\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|223736
NZ_CP019288.1\|WP_160130552.1\|3927927_3929160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130534.1\|3900523_3901021_-\|DUF4440-domain-containing-protein	unknown	unknown	gnl\|CDD\|379639

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160130550.1\|3925825_3926791_-\|succinylglutamate-desuccinylase/aspartoacylase-family-protein	gnl\|CDD\|349469	cd06251, M14_ASTE_ASPA-like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA)-like; uncharacterized subgroup. A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.	6.11596e-74
NZ_CP019288.1\|WP_160130540.1\|3907778_3911237_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|238084	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.	1.88401e-10
NZ_CP019288.1\|WP_160130542.1\|3913622_3914846_-\|hypothetical-protein	gnl\|CDD\|379523	pfam14253, AbiH, Bacteriophage abortive infection AbiH. This family of proteins confers resistance to bacteriophage.	5.81747e-12
NZ_CP019288.1\|WP_160130541.1\|3912074_3913364_+\|aminopeptidase-P-N-terminal-domain-containing-protein	gnl\|CDD\|238520	cd01087, Prolidase, Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.	1.22038e-91
NZ_CP019288.1\|WP_160130546.1\|3919756_3921013_+\|choice-of-anchor-B-family-protein	gnl\|CDD\|275117	TIGR04312, conserved_hypothetical_protein, choice-of-anchor B domain. This domain, about 385 amino acids long, can have either of at least two types of C-terminal sorting signal. Members from Shewanella and allies have the rhombosortase target domain GlyGly-CTERM (TIGR03501), while members of the Bacteroidetes have the Por secretion system C-terminal domain (TIGR04183). Most other members lack any C-terminal extension, but in most of those, the normal signal sequence is replaced by a lipoprotein signal sequence. Member sequences show a region of local similarity to the LVIVD repeat sequence (pfam08309).	0
NZ_CP019288.1\|WP_160130548.1\|3922407_3923166_+\|hypothetical-protein	gnl\|CDD\|188567	TIGR04052, hypothetical_protein_MettrDRAFT_3899, AZL_007920/MXAN_0976 family protein. Members of this rare protein family regularly occur next to a member of the MXAN_0977 subfamily (TIGR04039) of the di-heme cytochrome c peroxidase/MauG family (pfam03150). MauG itself (TIGR03791) is a protein modification enzyme responsible for the tryptophan tryptophylquinone (TTQ) modification involved in methylamine dehydrogenase activation. All members of this family have a motif of four spaced invariant Cys residues, while additional homologs outside the scope of this family lack the four Cys residues.	2.51158e-12
NZ_CP019288.1\|WP_160130545.1\|3918415_3919471_-\|thiamine-phosphate-kinase	gnl\|CDD\|100030	cd02194, ThiL, ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine. Thiamine salvage occurs in two steps, with thiamine kinase catalyzing the formation of thiamine phosphate, and ThiL catalyzing the conversion of this intermediate to thiamine pyrophosphate. The N-terminal domain of ThiL binds ATP and is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, FGAM synthase and selenophosphate synthetase (SelD).	1.57367e-110
NZ_CP019288.1\|WP_160130551.1\|3926768_3927662_-\|RimK-family-alpha-L-glutamate-ligase	gnl\|CDD\|182468	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase.	2.77962e-91
NZ_CP019288.1\|WP_160130536.1\|3902673_3903369_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	8.09975e-18
NZ_CP019288.1\|WP_160130533.1\|3898547_3900227_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	2.23835e-16
NZ_CP019288.1\|WP_160130537.1\|3903416_3906275_-\|glycosyl-hydrolase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	3.57227e-05
NZ_CP019288.1\|WP_160131943.1\|3916823_3917606_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.98818e-30
NZ_CP019288.1\|WP_160130549.1\|3923410_3925381_+\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	2.61882e-17
NZ_CP019288.1\|WP_160130539.1\|3906966_3907551_+\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.70958e-11
NZ_CP019288.1\|WP_160130534.1\|3900523_3901021_-\|DUF4440-domain-containing-protein	gnl\|CDD\|379639	pfam14534, DUF4440, Domain of unknown function (DUF4440).	2.31317e-20

>NZ_CP019288.1|WP_160130542.1|3913622_3914846_-|hypothetical-protein
MNKLIIAGNGFDLAHGLPTSYNNFMDAFWRDLKDDFEDELVKELVYIHPLNQDHFSKREVTNFKDFENNIHNYLKRNFRVYELDKYCFSQKGRAQNYDNQTILFKFKNQFFKELNKTQSIQNWVDVENEYYQALKNICKDEKLLARHKKEDVLKLHREFEQVKQLLEKYLQKNVVEAYNWSIEDSNSLLRILKPYESLDRILMLAEEFSIEEDITEIEKLMEVDSRSHTQSSSTETQILNFNYTPTFNEYVKSRKLTKFNIDINHIHGELNENIVFGFGDEMDEDYKLIEDMDDNEYLKYFKSFQYVQNSYYKDVLRFVDYEKFQVVIMGHSCGLSDRTLLNTIFEHENCRSIKVFYHQKEDGSDNYTEIIQNISRHFNDKKLMRTKIVEKTLCEPMPQIQLPKLVK
>NZ_CP019288.1|WP_160130541.1|3912074_3913364_+|aminopeptidase-P-N-terminal-domain-containing-protein
MKYQPIDRNLFSKNRKNFMAQMKPSSLAVFNSNDIYPISADSTMPFEQHRDIFYLSGVDQEESILVLFPDCPKEKHREILFLKETNEHIAVWEGEKLTKEAALASSGIKTVYWLKDLEKIMFEIMTQSDTVYINTNEHYRANVETETREDRFTKWLTAKYPAHSVAKSNPILQRLRSVKDKTEINLIQRACNITEKGFRRILGFVKPGVMEYEIEAEFIHEFLRSRSKGFAYTPIVASGNNANVLHYIENNQECQAGDLILMDVGAEYANYKSDMSRTIPVSGRFTPRQKEVYNAVNRVKNEATKMLVPGTDWAEYHVEVGKLMTSELIGLKLIDKTDVKNEDPDWPAYKKYFMHGTSHHMGLDTHDYGILTEPMQANMVFTVEPGIYIPAEGFGIRLEDDVVIQESGEPFNLMRNIPIEADEIEELMN
>NZ_CP019288.1|WP_160130540.1|3907778_3911237_+|T9SS-type-A-sorting-domain-containing-protein
MKKLLFLIVLLFAIVGYSQSPNPSISNQLYKEAPNWAKLMYAENPNANTIDNLYATYYKTNPYVKSFHTQYYKRWRRAINPFLNADGFYDATKKEQLREAMRTLRNTQTNNPEIGNWSPIGPFESYREGGTVLSGAQTNVYSISKCLAVPNTLYCGTESGEVYKTINGGDTWTNASKTLVTTLAPQAVIANGGISAIAVHPTNPDIVYAGAGSEVFKTTNGGTSWTVVFDSNIALFGYIDNPAEIYINPTTPETILLAGKAGVHRTTNGGTSWVKVLTNESFDIKAQPGNPNTLYTVRRNTSTNTHQFLKSTNGGSTWIIQNVGWYASSDANRSVVGARIAVSDADPLKVYAFLIGDSKAGDNGFIGVYRSDNAGVSWTNTMGYDGAPYTATHPNILNSDFGGAGFNQGFYNCAIMGSNANADEILVGGIGMWKSTDGGQTFTCVYNYGCGSYNPMHVDMQDFRAYGNEYWATTDGGIFKSSDMFSSQPEFKMNGVHGTDFWGFGSGWNRDLLVGGTFHNGVDVYAEGFPFGTFLDLGGGEPASGYVNPGTTQIYSTNIGGKFIPNTLSGAVMNASMGLAPTEEPWFAQSSEMEFHPSCYNHVYLGNSNQLFKSVDSGASYSAIYTAVANSTVLGIEISRRNTDTMYIVVRPNSGTPYLVKTTDNWATNTTITLPNVATTLALISLDPENDETIWLAFPRGDNGNKMFKSINSGTSWTNETSSELDGQHIQAMTTIGGTDGGVYVGTSMSVYYKNNTMASWTLDNSNLPVTVGANDLRPFYRDGKIRLATYGKGIWESNLFDTPTRPVAKIMVDKLTATCAGDIFYFDDYSMLNHTSATWAWTFQNGNIATSSMRNPEVNFTSTGTHTVTLTVTNAAGISDSDTITVNVEALTNTELEEDFEVAFVPDGWTQEATGNISWAYENTVGGFGLSTNSMFVNNYVTSQVGLHCDIIAPLNMLNLTAGDATLTFDVAYALYSAAYPDALEILISDDCGTTWTSVYNKVGSNLATAPNTTSQFVPTATQWRQESIDLSSYIGNENVQVKFRNINAYGQALYVDNINLGTTLGVNDVASEALTFYPNPVKNNASVFLKSTKNSAIKFSLYNIQGKLIGTVFTQTNKAIPTQQWSLSAGVYLYNIRSNDKIKKGKLIVY
>NZ_CP019288.1|WP_160130539.1|3906966_3907551_+|cyclic-nucleotide-binding-domain-containing-protein
MTISTKNFESYLKTIIQDASLNAAIPEILEAFNYLHLKKNTLFVEEGKVCQYFCFIESGILQHNIMVLGEEKTTYLALKNSATAALKSFIHKIPSRKNIKAISDCDLFVITQKDFQHLLKNNKAFNRFYYNLIENQIYRIDDYRIDLLTLTPEERYQKLLSNEPKLLKEVPLHYLASFLGISSRHMSRIRKNVF
>NZ_CP019288.1|WP_160130538.1|3906686_3906845_+|hypothetical-protein
MANNKEHNRGQTDKSNGKYKPGGSFLDFFGTNSQLRKVDRDRSQYDKGWNNK
>NZ_CP019288.1|WP_160130537.1|3903416_3906275_-|glycosyl-hydrolase
MKPKFFLFVFSIFFLQFSIAQTNPTSAAKVQEALNQKATLTQNSTVKNIEFTNIGPTVMSGRVVDLDVNPNNTTEFYVAYASGGLWYTKNNGTTFEPVLDSSPTQNIGDIAVDWTSKTIWVGTGENNSSRSSYAGIGILKSTDNGKSWENMGLLDSHHISRIVINPNNGNELVVAVLGHLYSANVERGIFKTTDGGKTWNKTLFVNSDTGIVDVAVAPNNFNVQYASSWERDRKAWNFVGNGINSAIYKSTDAGQTWNKINEKSGFPVGEGVGRIGLAVYDDETVYAFHDSQFRREDKKKKESDSKALTKDDFKTMSSETFLNLTDKELNTYLKTNGFQEKYRAENVKQLLRSGTIKPVDLSKYLEDANSLLFDTPVIGAQVFKTTNGGKSWDKTHEGYLDDLVYSYGYYFGLIRVSPKNKNQIYIAGVPILSSEDGGKTYKSINGQNVHVDHHSLWVNPNNPNHLINGNDGGVNISYDNGENWIKCNTPAVGQFYAIYADEQTPYKVYGGLQDNGVWIGSSNYKASVKWHEEGQYPYERIMGGDGMQVQVDKRNPNIVYTGYQFGNYYRIDRESGQRAYIQPKHELGESPYRFNWQTPIHLSVHNQDILYLGGNKLHRSLNKGDDWTTISNDLTQGGRKGNVAYGTLTSISESPFQFGLLYVGSDDGLIHVTKNGGGDWQNVSNGLPKDLWVTRVIASSHKKERVFITLNGYRWDDFTSYVYMSDNYGQTWKNIGNSVPNSPVNVIKEDPENENVLYLGTDIGAYASLDKGTSWQPFQGGLPNVAVHDIVVQKQAKDLLLGTHGRSIYKANIAVLQQVDETIKSKDVHVFAMKNVRYRSSWGSTWSKWLEPNVPAEHIDFHTKKAGKFTAKVSTEDDKIVLNEFKIDADAGFNTFTYDLSITSKGRKKYVGMNDDVEIPKKKNGAYYLPKGTYRIEVSGNGGKDVMKLVIE
>NZ_CP019288.1|WP_160130536.1|3902673_3903369_-|alpha/beta-fold-hydrolase
MQKKQKLYFLSGTMCTAQLWDFVCDELPRFECVFIDTTSANSFNEIDALLNETLEENACVVAFSMGAYSAMHFAVSNPNRIEKMIMIAASANGLDAKELQLRKSTIHFLEKHTYKGISNARALQFLHPKNHQNNELIQVIKDMDAELGKEVLIRQLKATSLRVDLTHELKNIETKIHIIASKEDALVNINHVKNTQQRLPKATITVLKNCGHMIPLEMPDLVRNTILQFFI
>NZ_CP019288.1|WP_160130535.1|3901123_3902578_-|hypothetical-protein
MKFLFLSCFLWIITFANAQPGDQFAMRKSQLLKIEKALQNDPNNVSLIWERLELTFDPHFNLYAKGKTFEGFQQRGFEYPYYILEDLNYLIANQISIKIKMKTISLANFYFKRGQLFYVTGYREYALDDYLVALKHNPAYKLKQEISLSIAAYYYNTGENYSLENYEIALFYIDLVTPKEDINKPFVYEKYSNRSSDYFQTEKIQLLKASRQEERLVTYLKCIAKNDLLFFEKEQKRSQKHQQSHSYTIKKSLQYGLDKLYEIAVYFYETGNYKKAKEIIEKVIPFIPKNTYGHYFETYAYGRYFVLLSKIYGTNEYENVSLEIENLLEGFGDPTQGLSEKAAKQYERLEVLLALYPYEAKLHLAKAIYLRKIKYNGGYRKPAGNPFESLQQCEELGLQDYRIPYLRALLLREEKRYAEALVEINKAQLLCSGYVNVYGLKLYLLQNVDIIDEAAIQQTKSLLEASKKQEKVNVPSILEMIHAI
>NZ_CP019288.1|WP_160130534.1|3900523_3901021_-|DUF4440-domain-containing-protein
MKSKLLLVLALGIFTISCVSIRAKSEVTVVKKATYIPVDQELYNTIVDLDKRFFDAYNTCDLETQNELLSEDIEFFHDKGGLSTSKTQIMEAMKNNICGKVTRTLIDGTVEVYPIAGYGAVQMGEHKFYNNQEPSAKSIPSKFVTIWKNDNGNWQMTRIVSTHKN
>NZ_CP019288.1|WP_160130533.1|3898547_3900227_-|helix-turn-helix-domain-containing-protein
MLHWNLYNTTIFIGAIGLLVLVLYRIFTKKIQDKTTRYFNWFLIITAVAILQYISFDIGFTRKYRVLALLVTPFEFLAPVIFTAFTCAYLQKEKLFKKYKYYLLIPFAAFFLIYTVVKINVFVDYAILSRETVGNIRMEWNENLALLFTFVIGVWNYSSIKKYEKDLGKMSYDFVLRKTKWLKNMYMTLILLSVFWLLTLLYIKTNVNVSGNDTYYPLWIAYLACYYVFYMKSISHLQYIQKEKVDEQTAFNLSSLDELFEPSALAVLQRNQSQVIAILSYFATSLFEINKTKEVLWDILENCISKLQLEDCVLYLLDEKKQVLHQEAAFGNKKQDGFEIHEPKEIPVGKGIVGSVAKTGNYELIKDTRKDKRYIVDDKARLSELAVPIYVEGKLKGVLDAEHSQCNFFTENHLYLFQLIAKLTEKKLLQLQLKKGLSISDDNCYYKEVCSLMKEKKRYRNPEIKLSTLSQEINISANYLSQVINALSGQNFSDFVNSYRIKEVKLKLSHPAFIEYPVLSIGLEAGFNSKSAFYNSFKKHTGMSPTTFREKHPYKSQFL
>NZ_CP019288.1|WP_160130544.1|3916202_3916775_-|hypothetical-protein
MFTSPFKKLSNASEKRLLLIAFLIFLLAASCMIHFDTLLKNDVAPLGIISFELASTLDCSTKILNSWQATEGAMNSAAWSLWFDYIFMFAYGFLLCLIIHRTARIVWKQPENLGYRLGIVLLRMVIFAVFLDAVENFALLQLFYGDLQSHWSTLAFATATIKFINIIFGILYVIVSLIIVGIKKTSHVKK
>NZ_CP019288.1|WP_160131943.1|3916823_3917606_+|alpha/beta-fold-hydrolase
MQQFVTCKNIEIAYTVSGKGNALVLLHGFLETSSMWKSYVKNLSKTHKIITIDLLGHGKTPCLGYIHTMEEMAETVFSVLKELNLRKIHIAGHSMGGYVALAFAEMYPDYVKGLCLINSTARADSTQRKINRDRAIKAVKYNHKQFIRLAISNLFRPKNRKIFAESIKEVKKEALTISLQGIVAALEGMKIREDREVLLHFSPYKKMMIIGKRDPILVYEELIAQTQNSEVEVHVFPDGHMSHIENEAELLNSLRLFLKI
>NZ_CP019288.1|WP_160130545.1|3918415_3919471_-|thiamine-phosphate-kinase
MLKDKGEQRTSLASLGEFGLIDHLTANFKITQSSTVKGIGDDAAVLDFKSKKVVVSTDLLIEGVHFDLSYMPLKHLGYKAIVVNLSDIYAMNATATQVTVSIAVSNRFPLEALEELYAGIQMASEVYKVDVVGGDTSSSTKGLLISVTAIGEIEEENITYRNGAKDNDLLVVTGDVGGAFLGLKVLQREKSVFEVNPNNQPDLDMYSYIIERQLKPEARKDISKLLHDLDVKPTSMIDISDGLSSEIMHLCKQSEVGCNLYEDKIPLDPQVISTCEEFKLDSTMVALSGGEDYELLFTVSQEDFPKIKANPNFTIIGHMTEAREGIHLVTRANTKIPLKAQGWNAMEEEQQ
>NZ_CP019288.1|WP_160130546.1|3919756_3921013_+|choice-of-anchor-B-family-protein
MKKYRYFITLAVAIAFFSACANDDHAPIPTEPIPNSIAFPDAIICENGFAGQYPCDGYDLMGHIPLSVFGASRGNDSWGWTDPQTGTEYALIGTNENTCFLDITDPTNPIYLGNLPTATVASSWRDVKVYNNHAFVVSEAPGHGMQVFDLTRLRNVVNAPEIFTADAWYDGFGSAHNIVINEQSGFAYAVGAMTLDDSTTSFNGGPHFVNIQNPTNPIAAGGYSDDAYSHDAQVVTYNGPDAEHVGKEILLGSNTNEVVIIDISDKNNPIQIATIAYADIGYTHQGWFTEDQRYFIVGDELDELNLGFNSRSIVFDLQDLDNPSVKMTYIGPTVAIDHNGYAKGNTFFLSNYTAGVRMLDISNIDGNQIQEIGFFDTFPTDNETTFNGAWNAYPYFESGNIVVSDINSGLFILRKSTD
>NZ_CP019288.1|WP_160130547.1|3921019_3922405_+|hypothetical-protein
MKKNIYFILFLTILLAFFFSCSSDDGTSAETPNPNITGFQGEIDWLKTFGGSEEDTAQDITKTADGGFAIVGFTKSINGDITDHTSEQNDYWVARLDADGNVLWSKTYGGTADDRGEAIKTTTDGGFIITGYSRSGDEDVNSNNGFYDQWIVKLDAGGNIQWEKSLGFSGSDQAFDIIQTSDGGYFTTGFLDITASGGQGSFGRQDASNVSFTNPEHGVGEYWCHKLDASGNITWSRYFGGTNNDRSYATLETNDNNFIIAGSSESDDFDITNSNGSYDFWVVKISNTGDLIWQQSYGGTGIEIGYDIAKTTDGNYVVVGDTRSSDGDISNLKGAADFWVIKVSDTDGSLIWERTFGGSDFESARAITNLQAGGFAIAGSAKSNNVDVNSNYGQNDFWVIKISEDGNLLWEKNFGGSQLDIAYGIIETNDEKLVVAGNTQSTDGDISVNKGIKDALLIKIK
>NZ_CP019288.1|WP_160130548.1|3922407_3923166_+|hypothetical-protein
MKNIVFISALIVLIIASSCKSDENALETSAVTITFDNRISASQDLILGTTTFVNQNNETILTNELKYIISNIALIQDNGTIFEYPTANSYFIINEEDASSLTLNLTGIPLGNYTHISFGIGVDQTKYPLDGGVLNFVPQADEAGMLWNWAAGYKFIKFEGTFTPQGGTESPFAIHVGSHGMTLDNYKFVTLPLTSPINVATGNTASINVKAFVKNIIDATNQIKLEDTSDIQVDPVNAPKIATNLEGVFRVE
>NZ_CP019288.1|WP_160130549.1|3923410_3925381_+|NACHT-domain-containing-protein
MDTSQELLIANLVYPIVKDLVLPKIQAVFKKNPKISVKKESVEEQLNLYLTQRYTKFLTIDTLVFPNMQTALEILYQPLTISCWEGVIGENIAIKIDSYPKELLPNYARVIIEDTAGMGKSTITKKLFQSIIEQKAGIPVLIELSQIKKKNSILKEIQNQMSPIGKKLSQDILLKLINEGNFIFLFDGYDEIALDDRDFTIKELHRFIEKAGDNYFLITSRPEDSLTSFGDFQKFHVNPLKNEEAYELLEKYDTYGHNKIAESLIEQLEESDDSLQEYLSNPFLVSLLYKSYEYKKDIPVKKTQFYQKVYDALFEAHDLSKVGYLKREKYSKLHTDDFERVLRYIGFFTSKANKIEYDKNSIIQFIEKAKRQTTDLKFKASDYLKDLLKTVPLFKKEGNNYKWAHKSLQDYFAAKFIWIDAKESRIDILIKIFHDEQNQRFYNVLLLYFELDRKGFEHTILKLLLIEFKKFIHDHDHYNYLSKEEHKIERIEKTFAKESIVIMISKASDYKKGASDVYRKYVKKTNKLNSFTEDQSAQLYKSQNPNRYIFTVITYNIYLAVILRLINEVYPNLTRKHFSTEYISTICKIREGNIYTLDDKRSNVLNKEENFKFVNDVIGNSNSRRSLKYYECLSKLKELEKNDSEAEKNELLDWKY
>NZ_CP019288.1|WP_160130550.1|3925825_3926791_-|succinylglutamate-desuccinylase/aspartoacylase-family-protein
MFENSENKIITINGETVKPGEAKWIKIPIDRLPTGTLIEIPIYVCNAEKPGPTLLVQGGLHGDEINGVEIIRRMLFEGCYKIKSGAVIVLPLLNVFGFIHFSRQVPDGKDVNRSFPGVNRGSLATRIAYHVTNEILPQIDFGIDLHTGGSQRNNHPQIRFTEKMPESKKLAEIFNAPIYFATSLIEKSFRETAFNMNIPIIVYEGGESMRFDEYAIKEGVQGILNVMKFMKMIDKIDPILIERKETHLLTSHRWLRAPTAGMFVPQVLNGCSIKKGDVLGLVTNPFATYHKEVKAPYDGFVFCINHQAVVNQGNALFHIGK
>NZ_CP019288.1|WP_160130551.1|3926768_3927662_-|RimK-family-alpha-L-glutamate-ligase
MNIYILSINARIYSTNRLYHEAAKKGHHVRIIDHTKCAVILGDEAKSQIYAGPENITNGVDAIIPRIGTSVTQHGAAIAKQFEMNGAFTTAKSAGIIRSRNKLRTMQLLAQKRIPIPKTLFAKDTSNIKQHIELLGGAPIIIKLQEGTQGLGVMIAESEKSAKSIIESLYTMNVNIILQEFIEEANGQDIRVYIVGNKIVASMMRSSTDEDFRSNVHRGGKTESVTLTGYEKKIALQTAKVLDLPVCGVDIIRSKRGPLVIEANSSAGLEGIESHTKVNIAGEIIKYLEKNVRKFGK
>NZ_CP019288.1|WP_160130552.1|3927927_3929160_+|hypothetical-protein
MPKSILLVALMLISSLAVSQEKLNDNLKIFLDCNRCDHTYIKQNLSNVQFVRDQGLSDVHLFFLIQANGSGGRLYEIDFIGKNQFEKINYKLKFSTNTDMTSDNVRNEILKHIKIGLVRYWIENGNLAGVTVTVPSAENEPEVVEKDAWNFWVFRLGANGNFNGEETNKSSNLNFNVSAKRVTEKNKFSLRASFGENKSTFTFDGSDIVAVNNSKSLNVSDVLSINSHWSYGIFGSIGTSTYRNYKLFWRLRPAIEYNFFKYEQSAKKQLILSYRNGLVFNDYIERSVFGEDKELVFEHSLLLGGSIRQEWGNINGEVSFNQYLHDTTLNSLGFYVGANVRVFKGFNVNIGGNYRITRNQINLPGGDVSLEELLLQQQQLQSGYNYWVSIGFSYSFGSIYNSIVNPRFNF

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Crispr_ID: NZ_CP019288_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_15

4390067-4390170

Orphan

Consensus_repeat	Method
AAATAGAAAATAGCACAAAGATGTTAGAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_15

>merge|NZ_CP019288|15|4390067-4390170|CRISPRCasFinder
AAATAGAAAATAGCACAAAGATGTTAGAATTAAGATTCATGACTTTTAGTAGTGTTGAGTATTCGGATTTTAGAAAATAGAAAATAGCACAAAGATGTAAGAAT

>NZ_CP019288|15|14|4390067-4390170|CRISPRCasFinder
AAATAGAAAATAGCACAAAGATGTTAGAAT	TAAGATTCATGACTTTTAGTAGTGTTGAGTATTCGGATTTTAGA
AAATAGAAAATAGCACAAAGATGTAAGAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160130945.1\|4391273_4392038_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP019288.1\|WP_160130950.1\|4396010_4397474_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	unknown	unknown	gnl\|CDD\|234660
NZ_CP019288.1\|WP_160130940.1\|4387732_4388683_+\|gliding-motility-lipoprotein-GldB	unknown	unknown	gnl\|CDD\|274623
NZ_CP019288.1\|WP_160130938.1\|4385628_4386258_-\|response-regulator	unknown	unknown	gnl\|CDD\|225107
NZ_CP019288.1\|WP_160130951.1\|4397506_4398742_+\|phospho-N-acetylmuramoyl-pentapeptide--transferase	unknown	unknown	gnl\|CDD\|234638
NZ_CP019288.1\|WP_160130949.1\|4394013_4396014_+\|PASTA-domain-containing-protein	unknown	unknown	gnl\|CDD\|223839
NZ_CP019288.1\|WP_160130952.1\|4399024_4400365_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl\|CDD\|235041
NZ_CP019288.1\|WP_160130934.1\|4380069_4381614_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP019288.1\|WP_160130939.1\|4386420_4387209_-\|NAD(+)-synthase	unknown	unknown	gnl\|CDD\|238309
NZ_CP019288.1\|WP_160130935.1\|4381695_4382673_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP019288.1\|WP_160130943.1\|4390305_4390677_+\|GTPase	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130941.1\|4388682_4389021_+\|gliding-motility-protein-GldC	unknown	unknown	gnl\|CDD\|132554
NZ_CP019288.1\|WP_160130937.1\|4384779_4385535_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130933.1\|4378636_4379959_-\|aryl-sulfate-sulfotransferase	unknown	unknown	gnl\|CDD\|368677
NZ_CP019288.1\|WP_160130946.1\|4392333_4392801_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	unknown	unknown	gnl\|CDD\|234728
NZ_CP019288.1\|WP_160130944.1\|4390651_4391260_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	unknown	unknown	gnl\|CDD\|234770
NZ_CP019288.1\|WP_160130936.1\|4382784_4384746_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP019288.1\|WP_160130947.1\|4392787_4393684_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	unknown	unknown	gnl\|CDD\|234597
NZ_CP019288.1\|WP_160130942.1\|4389067_4389820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160130948.1\|4393686_4394007_+\|S-adenosyl-methyltransferase	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160130945.1\|4391273_4392038_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.11112e-32
NZ_CP019288.1\|WP_160130950.1\|4396010_4397474_+\|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase	gnl\|CDD\|234660	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional.	0
NZ_CP019288.1\|WP_160130940.1\|4387732_4388683_+\|gliding-motility-lipoprotein-GldB	gnl\|CDD\|274623	TIGR03514, GldB_lipo, gliding motility-associated lipoprotein GldB.	1.86791e-108
NZ_CP019288.1\|WP_160130938.1\|4385628_4386258_-\|response-regulator	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.67414e-61
NZ_CP019288.1\|WP_160130951.1\|4397506_4398742_+\|phospho-N-acetylmuramoyl-pentapeptide--transferase	gnl\|CDD\|234638	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional.	2.21094e-163
NZ_CP019288.1\|WP_160130949.1\|4394013_4396014_+\|PASTA-domain-containing-protein	gnl\|CDD\|223839	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane].	6.20987e-103
NZ_CP019288.1\|WP_160130952.1\|4399024_4400365_+\|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl\|CDD\|235041	PRK02472, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.	1.13381e-147
NZ_CP019288.1\|WP_160130934.1\|4380069_4381614_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	6.87576e-09
NZ_CP019288.1\|WP_160130939.1\|4386420_4387209_-\|NAD(+)-synthase	gnl\|CDD\|238309	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD). The conversion of NaAD to NAD+ occurs via an NAD-adenylate intermediate and requires ATP and Mg2+. The intemediate is subsequently cleaved into NAD+ and AMP. In many prokaryotes, such as E. coli , NAD synthetase consists of a single domain and is strictly ammonia dependent. In contrast, eukaryotes and other prokaryotes have an additional N-terminal amidohydrolase domain that prefer glutamine, Interestingly, NAD+ synthases in these prokaryotes, can also utilize ammonia as an amide source .	3.52522e-81
NZ_CP019288.1\|WP_160130935.1\|4381695_4382673_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.38002e-86
NZ_CP019288.1\|WP_160130941.1\|4388682_4389021_+\|gliding-motility-protein-GldC	gnl\|CDD\|132554	TIGR03515, GldC, gliding motility-associated protein GldC. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldC do not abolish the gliding phenotype but do impair it. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	4.30629e-43
NZ_CP019288.1\|WP_160130933.1\|4378636_4379959_-\|aryl-sulfate-sulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	2.62735e-18
NZ_CP019288.1\|WP_160130946.1\|4392333_4392801_+\|division/cell-wall-cluster-transcriptional-repressor-MraZ	gnl\|CDD\|234728	PRK00326, PRK00326, transcriptional regulator MraZ.	1.30568e-36
NZ_CP019288.1\|WP_160130944.1\|4390651_4391260_-\|YihA-family-ribosome-biogenesis-GTP-binding-protein	gnl\|CDD\|234770	PRK00454, engB, GTP-binding protein YsxC; Reviewed.	1.64944e-96
NZ_CP019288.1\|WP_160130936.1\|4382784_4384746_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	1.76836e-155
NZ_CP019288.1\|WP_160130947.1\|4392787_4393684_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH	gnl\|CDD\|234597	PRK00050, PRK00050, 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH.	2.24854e-143

>NZ_CP019288.1|WP_160130942.1|4389067_4389820_-|hypothetical-protein
MQATTVDEVISFLDQIIEDNKEIPSTMGYFAALYHKVTCKVKEGIENHFFDDNPRMEHLDVIFANRYLQAYTDFKNNTTPSKSWQVAFEKADDYWFIVLQHILLGMNAHINLDLGIAAAEVMKGENINDLKGDFDKINVILGELVHDVEKELSLIWTTLTKILKETERFDTILIDFSMKLARDGAWKYATSLANSPATNWPQLISARDQRITEKVKLVTDPGFFANLILKIIRLEETGSIKTRIEILQKD
>NZ_CP019288.1|WP_160130941.1|4388682_4389021_+|gliding-motility-protein-GldC
MANKLNSEIKIAVTVDENNVPEAINWTAKDGGINTEATKAVMLSVWDHKAQESLRIDLWTKDMPVDEMKVFYHQTLVSMAKSFQRATNDEKMSATMLDFCDYFAEKLEIVKE
>NZ_CP019288.1|WP_160130940.1|4387732_4388683_+|gliding-motility-lipoprotein-GldB
MKNIVYILLLLVIGCANENLLEKEIAAIPIDVNVSRFEQVFLNASPSDLPKLKEVYPQFFPSSIPDSTWVYTMRDPLQKELKQEIDAVFTDFAPVQKDIVSVLQHIKFYFPEYGTPEVFTVTTEDYRKNIILTNSMILIALNTYLGGNHKYYEGIQQYIVQNFEKEMIPVDIANEFAFSQVQPARERTFLSNIIYYGKVQYIKSLLVPTVSKAKQFGYTERQINWSAENEAQIWTYFIEKELLYSTDNKLDNRFLNLAPFSKFYLELDSESPGGIGRYIGAQIVDAYMKNNDVSLQELLVKTPDEIFNNSKYKPKK
>NZ_CP019288.1|WP_160130939.1|4386420_4387209_-|NAD(+)-synthase
MKTEKVIDHIVKWLKEYATNAKVNGFVIGVSGGIDSAVTSTLCAKTGLPVLCIEMPIHQAASHVSRGQEHIKQLKERFDNVSDVRADLTPVFEEFKTEVTLEGEKATVDMALANTRARLRMTTLYYYAGLLGRLVAGTGNKVEDFGVGFYTKYGDGGVDLSPIADLMKSEVYQLGELLKVPKSIMKAAPSDGLFGDARSDEDQIGANYDELEWAMQMHEERKTAEDFTGRQQEVFKIYKRYNSSNRHKMIPIPVCKIPQNLT
>NZ_CP019288.1|WP_160130938.1|4385628_4386258_-|response-regulator
MVKVLIADNHPIVRKGIKSLFKNSTEIDVVGKAATTSELFDFISQEHVDVILLEMDLPEVNGITALRRLKKDFAEMKVIMFSSHSEDVYAVSTLRAGASGYLSKSVATNVIKDAIVKVANGGIYISNELAQRLAFDESTNKPRRFFRRLSTREVEVLKLLASGKRNKHVAEELNLNEKTVSTYKARLMRKLNVDNLVDLLQQAKALELL
>NZ_CP019288.1|WP_160130937.1|4384779_4385535_+|hypothetical-protein
MKKIITCTFFLLSVCLFSQNKEEIEADYELQGYFKNYQEFNIDSLKAKKFKHIVYIDLQGNGFIFERKLENNLKQTVYTILVNFPYGKYQRHKEYKVHMFSKNDSIIGLISYHAKTGSVNSYFDYKKLYAHIELHNELYETKFGVSDFIDQFKTMKTYGFHCGFSPIMNGALQHDDFYFDNIRNAKHFRKWLKSFNPELQAFGIKALEHLEEKEKLPLSPLEKKLIKHIKTRNSTLLICGGCVSFPRRLYD
>NZ_CP019288.1|WP_160130936.1|4382784_4384746_+|DNA-primase
MISKSTIDAVFDAARVEEVIGDFVQLKKSGSNFKGLSPFSEERTPSFMVSPVKQIWKDFSSGKGGNAVAFLMEHEHFTYPEAIKYLANKYGIEVEETERTDEEKELANEKESMFLVSEYAKKYHQDILWESPQGKAIGLTYFKERGFTPETIKKFGLGYALDEWDAFTTTALKEGYNLNYLAKTGVTIVKDEKRFDRFKGRVMFPIHSMSGRVLGFGGRILTNTKKAAKYLNSPESDIYHKSKVLYGLYYAKQAIAKEDNCYLVEGYTDVIQMHQAGIHNVVSSSGTALTADQIRLINRLTKNITVLYDGDAAGIRASLRGVDLILEQDMNVRVCTFPDGEDPDSFAKNNSLQDVLEYFENNVKDFISYKASLLMEVAKNDPIKKAEVINDMMSSISKVSDRIKQELYLRETSRIMNISEEVLFATLAQLQNRDIKEANKKTTQEKKAFEVIKTEKKAEAVDVQYVLERKIIEILLLYGNMEATFEDLILKEDDEGELKMERELFEAKVFEKLYLDLQQDEIDLANETFKAIYYSAIEKLNTTGTLELDTFVNEIAPEIASEVTDILMREERYELHNWEAQNIFVKTKEETIAQLTSETILSLRCFLINLKIEELKLSLQQNAELEKLQSVLEEITNYISLKKALSEQLKRVL
>NZ_CP019288.1|WP_160130935.1|4381695_4382673_+|polyprenyl-synthetase-family-protein
MKVVAQIKQPIQKEMELFEKKFSSSMISKVALFNRITHYIVNRKGKQMRPMFVFLVSKMTSDGIVNERTYRGASVIELIHTATLVHDDVVDDSNRRRGFFSINALWKNKIAVLVGDYLLSKGLLLSIDNGDFDLLKIISVAVREMSEGELLQIEKARRLDITEDIYYEIIRQKTATLIAACCAMGAKSVNASDEEVERMRLFGEHIGMAFQIKDDLFDYGNTQIGKPTGIDIKEQKMTLPLIYALNHCTNEEKKWAINSVKNHNKDKKRVKEVIAFVKKTGGLEYAVTQMKTYQEKALTLLETYPQSTYKDSLELMVNYVIDRKK
>NZ_CP019288.1|WP_160130934.1|4380069_4381614_-|T9SS-type-A-sorting-domain-containing-protein
MKKITLFLFCFLIFSYAGIAQDTCAFATAITAGTHTVTTVDGTEGTTVICAGGTTTGAAAEWYTYTPIASGSATVSSNILPANANGDTRLHIYEGTCGALVCVTGNDDVDYPGGNYLSEATFNTTANTTYYIVWDNRWSSFGFDFTLTEAAAVCVDPSTFVANGSTSTTFDLGWTDTNTGTPTWEIEWGLDAFTQGTGTLVSNIATPSYVFMGLSPNTNYDFFIRTNCGGSNGDSSWVGPIGFRSARDCSASAAFPFSQSFADGTILDCWAFEDTDMISPVWSFNTDTNDLDGDGTNDNFMVVFPQAATEVAKNDWIFSKKMDMTTVNSYGIDVLYNAFDLNTVSDESFELYITDGTSSTALYQSLLGTYTGITQSGVFGDNTGNDLVTQAYTASVTFTPPSDGTYYVAMRATTTNSANLLMLFNLSVSETLGVEEFGADNFKHFINYDTSVLTIEASENMSDFVLYNSLGQQVLNSKLSSKVHELDLSNIDAGIYFAKVGIENKTKSFKILVK
>NZ_CP019288.1|WP_160130933.1|4378636_4379959_-|aryl-sulfate-sulfotransferase
MKKKLGKFLVLFCIVLFFNCKDDDATTPTPIVLNENLVVYDGYTLFSPLGSNNTFLINNEGFVVNKWESETPALISYLTDEGNLIRAIRQEGSNFTGGGATGAIEILSFEGDELWFWEYNTSNYVLHHDIALLPNGNILATVWELKSGNEAITKGRNPSLLFANEVWPCKVIEIKPLANNQAEIVWEWSVWDHLIQDHDATKENFGIVSEHPELININFSGGDANFNHLNSIDYIEELDQIVVSSRVFNEFWIIDHSTTTAEAASHVGGNSTKGGDLLYRWGNPQAYNSGTSENQRLFGQHDVTWIGNTINNGGNFMVFNNNKFSDKSSIDEILIPQLANGTYELMPNTINLPETSVWSYDNELIFSSRLSGAQRLPNGNTLITEGGAGTLFEINQSGTIIWQYQNPVETNVSIFKVDKYGKNHPAFEGRVLTSLQIEIE
>NZ_CP019288.1|WP_160130943.1|4390305_4390677_+|GTPase
MKKIIFVYNATSGKVNSLLDIAHKLISPKTYQCDLCSITHDTFSENEQWKQFRETTKLPLEFLHSDEFEANYKNKDAKYPVIFLEENQKLTEWISKSDIEQLENTEELIQLIKTKTMNFSNLY
>NZ_CP019288.1|WP_160130944.1|4390651_4391260_-|YihA-family-ribosome-biogenesis-GTP-binding-protein
MKIKSAEFVMSNSDVAKCPKNPIPEYAFIGRSNVGKSSLINMLTQRKSLAKTSGRPGKTQLINHFKINNEWFLVDLPGYGYAKTSKTSKRVFQKFITEYFSKRTQLICGFVLVDIRHEPQKVDLEFMQWLGENQIPFCIVFTKADKLPPSQIDKHVNAYRDKLLEDVWEEMPKHFVTSSSKAIGREEVINYIGQINKDLKNS
>NZ_CP019288.1|WP_160130945.1|4391273_4392038_-|alpha/beta-fold-hydrolase
MKESFKKEGKFNYLELGEGTPIVILHGLMGGLSNFEAVTKNFSAKGYKVLIPELPIYTKPLLKTTVKNFAKYVREFILHKKLDKVILLGNSLGGHIGLLHTKLYPELVKGLVITGSSGLYENSMGVGYPKRGDYEFIKKKSEDVFYDPTIATKEIVDEVFATVNDRSRLIKTLAIAKSAIRHNMGKDLPKMNIPVGIIWGKNDTVTPPNVADEFHELLPDSDLYWIDKCGHAPMMEHPTEFNEHLQDWLTKRNF
>NZ_CP019288.1|WP_160130946.1|4392333_4392801_+|division/cell-wall-cluster-transcriptional-repressor-MraZ
MINLIGTYECKVDAKGRMLVPADLKKQLSPILQEGFVIKEGLFGSCLELHPMSEWDKVTEKLNKLSRFKRENVDFIRRFNKGVRMVDIDSAGRLLIPKDLVVFAGIKKEIVVSSAINSVEIWDKEKYETATDDASVDIGDLAEKVMGNDDGDGIS
>NZ_CP019288.1|WP_160130947.1|4392787_4393684_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase-RsmH
MEYHNPVLLKETVDGLNIKEDGVYVDVTFGGGGHSKEILSRLGENGKLFAFDQDQDALENAIDDPRFKLISQNFRHLKKFLRFYGIKKVDGILGDFGVSSHQFDVAERGFSLRFEADLDMRMDQEGEISAFHVVNEYSERDLISLLFSYGELRNSKAIAARIIEVREEKPIKTTEELRVALKRFLPNYKEHKILAQIYQAIRIEVNQEIEALKEFLLETLDMLESGGRMSLISYHSLEDRLVKRFIRNGLFEGEPEKDFYGRFEVPFKKVGGLIIPSKEEIKINNRARSAKLRIAERV
>NZ_CP019288.1|WP_160130948.1|4393686_4394007_+|S-adenosyl-methyltransferase
MVKQNIYDILKGKFLIKDDAIKNWRFIVFASFLALIMIASSHWADEKVHKIAKLNEQVKELKSEFVDARTTLQQLKLESYITKKVASRGLAPSENPPKKIRVKSQQ
>NZ_CP019288.1|WP_160130949.1|4394013_4396014_+|PASTA-domain-containing-protein
MPVTDKNILNRLYFIAGGMFLFAIAVVVQLVNIQFIEGEKYKEMAQEQTFRNAVIAPSRGNVYADDGSLLATSVPKYDIFFDTKTVNKKIFFDNVKPLADSLSAMFGKSSAHYDQMLVTARKNKNQYLRIARKLSYSQYIRIKQFPIFKLGTIKGGFIDKVKTVREHPIGKIAERTVGHQREGQKGVGLESAFSEYLRGKEGRRLEQKIAKGQWKPVSGDNELEPQDGYDIISTINVNVQDIAHHALLEQLEKYKADHGCVVVMEVATGEIKAISNLGRNKKGKYYERLNYAVGESHEPGSTFKLMAMVAALEDRVIDSNYVVDTGNGKLTFYGDVVEDSNHRGYGKISASEAFEVSSNVGIVKIIYDFYNKNPEKFVDRLYNMGLNKKLDLPIAGEGAPIIPHPNDKKGWYGTTLPWMAFGYGVSLTPLQTLTFYNAIANDGEMVRPRFVKAVRENWYASEKVFEKEIINPSICSKETVAKVTKMMQNVVEKKHGTGNSLYSPDFSMAGKTGTCQKNYGDGDKDKLQYISTFSGFFPVENPKYSCIVVIHEPDRKIGYYGADVSGPVFKKIAHKIYTDTPIFDQVENINTVHGTVSTDYENYREKSRKYKTIMPNVIGMPAMDAIPLLENLGLRVEIKGNGKVTKQSIEAGIKIESQKSIVLELS
>NZ_CP019288.1|WP_160130950.1|4396010_4397474_+|UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,-6-diaminopimelate-ligase
MNILKDILYKVPLEAVTGDTTISVRELVFDSRKVESNDVFIAIKGYEVDGHSYINKAIKLGAIAIICEEIPAEIVNGITYVQVANGNSALAIMAANYYGNPSENLKLIGVTGTNGKTTIATLLYHLFKKAGYKVGLLSTVKVLVDNTEYKATHTTPDSLTINRYLKEMNHEGVEFCFMEVSSHGIHQKRTAGLVFQGGIFTNLSHDHLDYHDTFAEYRDVKKKFFDELPKEAFALVNIDDKNGLVMLQNTRAKKYTYALKTYADYRAQILENRLAGLLLKINDNEVWTKLIGNFNAYNLLSIYATAELLGLEQIEILRLISELESVSGRFEYFITKNKITTIIDYAHTPDALKNVLETINNIRTGNEQLITVVGCGGDRDVTKRPKMGNIASTLSTKAIFTSDNPRSEDPDAIIEAIEKGVEPQNYKKTLSITDRKQAIKTACQMANENDIILIAGKGHETYQEVKGNRTDFDDYKIAKEILDNLNE
>NZ_CP019288.1|WP_160130951.1|4397506_4398742_+|phospho-N-acetylmuramoyl-pentapeptide--transferase
MLYYLFEYLEKQYQFPGASLFGYLSFRAAMAVILSLLISTIYGKRIISYLRTKQIGETVRDLGLDGQKEKAGTPTMGGIIIILATLVPVLLFAKLGNIYIILLLVTTIWMGIIGFIDDYIKKFKNDKDGLKGKFKILGQVGLGIIVGATLFFHQDVTIREELPVKQQTEVVANNNTPTKKFGEEKRSMKTTLPFVKNNEIDYAKLITWINPDYAKYAWLVFIPIVIFIITAVSNGANLTDGIDGLAAGTSAIIVLTLGIFAWISGNLIFSEYLNVMYIPRAGEITIYIAAFVGALIGFLWYNTYPAQVFMGDTGSLTIGGIIAVIAIAIRKEWLIPILCGIFLAENLSVVMQVSYFKYTRKKFGEGKRIFLMSPLHHHYQKLGYHESKIVTRFWIVGILLAILTIVTLKLR
>NZ_CP019288.1|WP_160130952.1|4399024_4400365_+|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MHKKRLVILGGGESGVGTAILGKQQGYDVFVSDKGEIKDKYKNVLNQFEITWEEKQHTKANIFNADVVMKSPGIPETVSLIKELIAKGISVISEIEFAVQFTDATIVGITGSNGKTTTTLLTHHILKNGELNVGVAGNMGDSFAKQVAEQNYDTYVLELSSFQLDGIVDFKPHIAIITNITPDHLDRYDYKFENYIASKFRIAMNQTSEDYLIYDADDEVLVNWLQKHPVKSKLIPFSLVKKLENGAYIEKQNIILTIHNKTITMPTDSLALEGQHNTKNAMAASAVAKLLNIRKQTIRESMSGFQGVEHRLEKVLKIQNVQYINDSKATNINATYYALESMTTQTVWIVGGVDKGNDYTDLLPLVHEKVKAIICLGVDNSKIIESFGRVADLMVETTSMDEAVQMAHKIAEKGDNVLLSPACASFDLFENYEERGRQFKAAVRNL

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Crispr_ID: NZ_CP019288_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_16

4493224-4493316

Unclear

Consensus_repeat	Method
TATAACGCTAAACAATAATGCTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_16

>merge|NZ_CP019288|16|4493224-4493316|CRISPRCasFinder
TATAACGCTAAACAATAATGCTTCATTAACAACTATTGATGGTCTGCAAGGTTTACAACAATCAGGTAGTATAACGCTAAATAATAATGCTTC

>NZ_CP019288|16|15|4493224-4493316|CRISPRCasFinder
TATAACGCTAAACAATAATGCTTC	ATTAACAACTATTGATGGTCTGCAAGGTTTACAACAATCAGGTAG
TATAACGCTAAATAATAATGCTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160131036.1\|4502339_4503128_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131035.1\|4500894_4502010_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP019288.1\|WP_160131029.1\|4490967_4491750_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_CP019288.1\|WP_160131022.1\|4482794_4484093_+\|DASH-family-cryptochrome	unknown	unknown	gnl\|CDD\|274288
NZ_CP019288.1\|WP_160131038.1\|4503738_4505976_-\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP019288.1\|WP_160131028.1\|4489762_4490419_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP019288.1\|WP_160131023.1\|4484102_4485638_+\|cryptochrome/photolyase-family-protein	unknown	unknown	gnl\|CDD\|225588
NZ_CP019288.1\|WP_160131031.1\|4494028_4496230_+\|thrombospondin-type-3-repeat-containing-protein	unknown	unknown	gnl\|CDD\|275366
NZ_CP019288.1\|WP_160131033.1\|4498038_4498698_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_CP019288.1\|WP_160131026.1\|4487260_4488574_-\|aryl-sulfate-sulfotransferase	unknown	unknown	gnl\|CDD\|368677
NZ_CP019288.1\|WP_160131034.1\|4499839_4500601_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223675
NZ_CP019288.1\|WP_160131027.1\|4489064_4489766_+\|zinc-dependent-peptidase	unknown	unknown	gnl\|CDD\|380913
NZ_CP019288.1\|WP_160131025.1\|4486081_4487131_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131037.1\|4503160_4503667_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_007096854.1\|4498839_4499703_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|236413
NZ_CP019288.1\|WP_160131024.1\|4485650_4486061_+\|DUF2452-domain-containing-protein	unknown	unknown	gnl\|CDD\|371098
NZ_CP019288.1\|WP_160131021.1\|4482658_4482802_+\|DUF2256-domain-containing-protein	unknown	unknown	gnl\|CDD\|378353
NZ_CP019288.1\|WP_160131039.1\|4506142_4506412_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP019288.1\|WP_160131020.1\|4481794_4482565_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238874
NZ_CP019288.1\|WP_160131032.1\|4496246_4497851_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275366

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160131035.1\|4500894_4502010_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	2.93159e-18
NZ_CP019288.1\|WP_160131029.1\|4490967_4491750_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	1.13001e-10
NZ_CP019288.1\|WP_160131022.1\|4482794_4484093_+\|DASH-family-cryptochrome	gnl\|CDD\|274288	TIGR02765, deoxyribodipyrimidine_photolyase, cryptochrome, DASH family. Photolyases and cryptochromes are related flavoproteins. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes do not repair DNA and are presumed to act instead in some other (possibly unknown) process such as entraining circadian rhythms. This model describes the cryptochrome DASH subfamily, one of at least five major subfamilies, which is found in plants, animals, marine bacteria, etc. Members of this family bind both folate and FAD. They may show weak photolyase activity in vitro but have not been shown to affect DNA repair in vivo. Rather, DASH family cryptochromes have been shown to bind RNA (Vibrio cholerae VC1814), or DNA, and seem likely to act in light-responsive regulatory processes. [Cellular processes, Adaptations to atypical conditions].	1.21858e-166
NZ_CP019288.1\|WP_160131038.1\|4503738_4505976_-\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP019288.1\|WP_160131028.1\|4489762_4490419_-\|histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	9.83968e-28
NZ_CP019288.1\|WP_160131023.1\|4484102_4485638_+\|cryptochrome/photolyase-family-protein	gnl\|CDD\|225588	COG3046, COG3046, Uncharacterized protein related to deoxyribodipyrimidine photolyase [General function prediction only].	0
NZ_CP019288.1\|WP_160131031.1\|4494028_4496230_+\|thrombospondin-type-3-repeat-containing-protein	gnl\|CDD\|275366	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	8.35201e-16
NZ_CP019288.1\|WP_160131033.1\|4498038_4498698_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	1.08593e-117
NZ_CP019288.1\|WP_160131026.1\|4487260_4488574_-\|aryl-sulfate-sulfotransferase	gnl\|CDD\|368677	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST). This family consists of several bacterial Arylsulfotransferase proteins. Arylsulfotransferase (ASST) transfers a sulfate group from phenolic sulfate esters to a phenolic acceptor substrate.	6.48837e-09
NZ_CP019288.1\|WP_160131034.1\|4499839_4500601_-\|radical-SAM-protein	gnl\|CDD\|223675	COG0602, NrdG, Organic radical activating enzymes [Posttranslational modification, protein turnover, chaperones].	2.87947e-40
NZ_CP019288.1\|WP_160131027.1\|4489064_4489766_+\|zinc-dependent-peptidase	gnl\|CDD\|380913	cd20170, Peptidase_M90-like, uncharacterized M90 peptidase family-like proteins. This subfamily contains uncharacterized M90 peptidase-like domains, similar to the Mlc Titration Factor A (MtfA) peptidase from Escherichia coli, also known as the YeeI gene product, which is involved in the control of the glucose-phosphotransferase sensory and regulatory system by inactivation of the repressor Mlc (making large colonies). E. coli MtfA has been shown to have aminopeptidase activity with the presence of a single zinc ion in the active site ligated by two histidines in an HEXXH motif. MtfA is related to the catalytic domain of the anthrax lethal factor and the Mop protein involved in the virulence of Vibrio cholerae; although sequence similarity is low, conservation is observed in the overall structure as well as in the residues around the active site.	2.88278e-96
NZ_CP019288.1\|WP_007096854.1\|4498839_4499703_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|236413	PRK09210, PRK09210, RNA polymerase sigma factor RpoD; Validated.	5.10766e-95
NZ_CP019288.1\|WP_160131024.1\|4485650_4486061_+\|DUF2452-domain-containing-protein	gnl\|CDD\|371098	pfam10504, DUF2452, Protein of unknown function (DUF2452). This protein is found in eukaryotes but its function is unknown.	1.06112e-06
NZ_CP019288.1\|WP_160131021.1\|4482658_4482802_+\|DUF2256-domain-containing-protein	gnl\|CDD\|378353	pfam10013, DUF2256, Uncharacterized protein conserved in bacteria (DUF2256). Members of this family of hypothetical bacterial proteins have no known function.	1.18864e-16
NZ_CP019288.1\|WP_160131039.1\|4506142_4506412_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	5.84108e-45
NZ_CP019288.1\|WP_160131020.1\|4481794_4482565_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238874	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	2.70715e-50
NZ_CP019288.1\|WP_160131032.1\|4496246_4497851_+\|hypothetical-protein	gnl\|CDD\|275366	sd00002, TSP3, Calcium-binding Thrombospondin type 3 (TSP3) repeat. TSP3 repeats of the vertebrate thrombospondin (TSP)-1,-2,-3,-4 and TSP-5/also known as COMP (cartilage oligomeric matrix protein), and related proteins. These short aspartate-rich repeats are a continuous series of calcium binding sites that can be divided into two sequence motifs: N-type and C-type. N-type and C-type motifs are distinguished by their sequence length, calcium ion binding, and their interactions with water molecules. C-type motifs are higher affinity binding sites compared to N-type motifs.	2.74658e-14

>NZ_CP019288.1|WP_160131029.1|4490967_4491750_+|T9SS-type-A-sorting-domain-containing-protein
MIRKIHVGLLLFFVVQSYGQSLINDGATIMLQEGAIVYSTESFTNRNGGQIKGDGTMDFASAMNLAVINPGVVIGDLSFSSSLTNTSDAGFMMDIQGTAGIGVDNGNDHVFVDGDLVINGILDIAAIDGFMPVINDSFTIISYTGDLSGSFTTVNLGANLTDFAVDYSMLGQIRLVHQSLLSREEFILESLRVFPNPTNDYIYIKALQKIDKVEVYDLLGKQVLLTNQTEKVNLVSLAKGLYLVKVYSGNASQVKKIQVK
>NZ_CP019288.1|WP_160131028.1|4489762_4490419_-|histidine-kinase
MSSNELSLRYDLLNSQMNPHFINNAIQSICNSITKGNVNQSINWLNRLSRLYGLVQKSTKCKMIDLLDEIEISRLYIELQKDLFDKGFKYTIKIDEALKDDLQYTKVPPLIFQPLIENAILHGLKGKKRTGKGELTISITLEKEMLYVCITDNGDGITKTKSELNESSGISLENINERLKIINGNQCEKKLLHVRTLRNDTGMALGTRSCLRVPLIQI
>NZ_CP019288.1|WP_160131027.1|4489064_4489766_+|zinc-dependent-peptidase
MHRFVLFADAFTEKQRAIIVKEISFYSKLTPKEQRVFEHRVLRFIRYHTFVGRENLFVTERMQLLISATAIMLTFGFSRYLLSKFETILVYPEHYFSNVTKQFHKGEANPTYKTIVFSWEDFEEGIKIEDDNLNLGIHELTHALHFSFLTEDSYHASHFLKHYKLLLLSLRKKEAQKRLIEMKYLREYAFENQYEFLSVLIEHFFETPDEFRSKLPNIYNRVKLMLNMKVEGF
>NZ_CP019288.1|WP_160131026.1|4487260_4488574_-|aryl-sulfate-sulfotransferase
MKITPTIKYIAFALLFAFVSCSDDDNTITPVASDPNPTPDPNPVSLTNEVEIYVADKIHNNLTLAVVNGSDSAFLLDKTGQKVHEFTFDDRLGNDLEILPNGKMLGIFKDPAATIIFGGHGGKVKILNSDGSVDWEYFLSSDDFVLHHDVEMLPNGNVLLLVWERISETIQEPHGSINSGNIYTEKIMEINPTTNSIVWEWRSWEHIVQDEDPALLNYGVVSQNPHKIHINYNPASNGDIMHANGFDYDETKDVIYLSVNFFSEVWVIDHSTTTAEATTSTGGNYGKGGDLLYRFGNPLAYDNTVGEVRSDRNHYPNLLENGVPGEGNILLYVNGLSAGFSKVLELEMPATFTLTPDVDNEPNLVWSYENTDIFSNKISGAERLSNGNTLICEGDFGFWEITPEKEIVWKYNGGDGAGFWRAYDFEVDDPRLANFGF
>NZ_CP019288.1|WP_160131025.1|4486081_4487131_-|hypothetical-protein
MNITQLFNRNFVRFGIPALLFSILIIYVKSPYFQANTDILTLGISLDLLVTIPIIYFLLIRKTTIPKTTIVPMMIVGLLIGIFVLPETNHQYLNFFKTWFLPIIEISVVTFVIVKMRKAILFHKSQENSTLDFFTTLKKTCAEILPKPIVIPFATEIAVFYYGFFNWKRRKLAENEFSYHKESGSITLFYMFIMLIAIETVPIHFLLAMWNPIVAWILTILSIYSGFQIFGFVRSMTKRPIEVTKDTLLLRYGIMHEAEIPLSEIKEIKLYKKSFTEEDNSMRFSLLGEMESHNILIEIHNEQTLHGLFGIKKQFTKLALHVDKDVAFKTYVDTALNLQKETKANLSIL
>NZ_CP019288.1|WP_160131024.1|4485650_4486061_+|DUF2452-domain-containing-protein
MQEEDKKPDNVVFDEETQKYDAALKPYATGVGAPVITTPDTVTWKNVNIDKVNKQVKAKYEELKAEYDALMEKFEYNNLIYSAKFNFEPIVGEIYHLYRDKKQQSFLSIIAPNQCRFDYVQSFRLNADKMWEVIGD
>NZ_CP019288.1|WP_160131023.1|4484102_4485638_+|cryptochrome/photolyase-family-protein
MKTLRFILGDQLNHEHSWYQNTDAEVVYFMAEMKQETNYVKHHIQKVVAFFKSMRSFSDWLQRENHNVVYFTLDSEKNQHDLVANLKLLIKEHNIEKFEYQLPDEYRLDVQLKSFCQEVSIETEVYDTEHFLTSRTDFAEFFEGKKQFVMEYFYRDMRKKYDIMMLTEKNPEGGKWNFDQSNRKKWKGLPEIPPEKQLKNSVSAIYEMIQKAEIETIGSIDVANFPWTTNREDSLDLLDYFCDELLVHFGDYQDAMHTEERFLFHSRLSFAMNSKMLHPKEVIETVISYWRANKETIDISQVEGFVRQILGWREYMRGMYWKQMPNYRTLNALNNTNSLPDFYWTGNTKMNCLKHAITQSLENAYAHHIQRLMITGNFALLTQMHPDAVDEWYLGIYIDAIEWVEITNTRGMSQFADGGLVATKPYVSSGSYINKMSNYCKGCAYKVSKKTEENACPFNSLYWNFLDEKREYLKDNQRMTMMFSLLDKMDKTKLEALKNRAQAIIANPDDY
>NZ_CP019288.1|WP_160131022.1|4482794_4484093_+|DASH-family-cryptochrome
MTKTGLVWFRNDLRIHDQISLVKAAKENDFVMAIYCFDPRHFEKDRFGFVKTEKYRAQFLIESVESLQVALNDLNISLFIHVGKPENLIPEFIKLHKITSVYLQKEWTSEEVEVFENVKSNVETEINFIESYDQFLYHPADIPYEIEKIPQVFTGFRKKCEKYANIRPIETVAKMVATNRVAHLTKVPTLKVLGLTEFEQDARTAFPFNGGEKASLQRLKNYTWETKKLSYYKQTRNGLVGKDYSSKFSAWLANGSLSPRMIYHEIQKYESEIVKNQSTYWMIFELIWRDFFKYISLKHENNIFKLEGILHKTYDWNRDQKLIQQWIDGETAEPFVNANMLELKHTGWMSNRGRQNVASYFAKTLQLDWRIGAAYFESLLLDYDVHSNYGNWLYVAGVGNDPRNRTFNVKLQAERYDANKKFQNLWLQTSLF
>NZ_CP019288.1|WP_160131021.1|4482658_4482802_+|DUF2256-domain-containing-protein
MKKTHLPSKLCKVCQLPFNWRKKWERVWDEVQYCSERCRRNKNKKDD
>NZ_CP019288.1|WP_160131020.1|4481794_4482565_-|SGNH/GDSL-hydrolase-family-protein
MNIKYTLGAIVSIPLLPILYFQGKKIQKTIPQLPEATGIEGICTVSSNQTFQLITIGESTIAGVGATTHENGFTGTLAKALSEKLVKNISWKVYAKSGYTAKRVKEKIIQNIHEKFADIIVIGLGGNDSFKLNSPKKWNRAIRELIATLREKYPETPIFFINMPPIKEFPAFTNTIKFVMGNLVLHFSKELKKVVNDFDNVHYYSKPIVFNEYIESMNLDATTADFFSDGIHPSEFAYQIWAKDVANYMLEEKILT
>NZ_CP019288.1|WP_160131031.1|4494028_4496230_+|thrombospondin-type-3-repeat-containing-protein
MNMKKYFLTTILMLLCIMMNSQNYCGFSNSFRSQGFTTQAQIDSFVANHGSCNAIGNSNLTIGSTSGPSDIVDISGLSFLVEILQGGLTIANTQLTTLDGLQNLTTLGSYNHSIIITGNPNLTSISALQGATNSPGGLLNTIVIRDNPLLQNLNGLELFSVKTTFNLVNTGVASLSGLNLSQSSLYFIATDNPNLGDFSGMTMASGTNFDLISIKNNASLSSLAGLESITTAGEIIVENNGLVTLNGLNNLTTVSTTLTIKENNSLNSLDGLNSLSSVGTNLLINLNSNLTSISALSNLTSVGNDIYVINHPNLASLVGLEGLNTVDEVQITNNQAITAADFTGLTDVTNFTIYNNGQLQTLSMPNLTNVSNQLSIYGHSSLQTISLNSTTATSINKLRVFTNPSLTQINGMLANHVTATNIEGVLIENNLTLTSLDILTDITNYKKGITIKNNSSLANLGDLQNLQESGDIRIDGNSGLVNIDALQGLQESNNITLNNNASLATIDGLQNLIKTNNLTISNNQSITTLNNLGQRIEIFGDLTVTGNQNLTDIDYLEDLIKVYGDLSITNNVILDECCVLSRFYTGGALNGSIIISGNNTNCDSNRDVLDNCGEDGVITNDNCQDTSNPDQTDTDNDGVGDACDNCPSVANNNQLDSDNDGIGDVCQTQAGANTGFVGISTNTPMSKLHIEDGDVFLSNINRGIIMKTASGRCFRFQPNEQGKLVGKEVACPQ
>NZ_CP019288.1|WP_160131032.1|4496246_4497851_+|hypothetical-protein
MKKYYITIIFSFIMFVVQAQPCSTTNITLNSQAEVDSFIINNAGTCTTSSFTLTVTGSDVVDISGLSFITSVGRSLVIENTGLTTLDGLQNITAIGNPTLSYSLTINNNPNLVSLQALSGLTSLTESLIITNNASLPNLLGLEGLASLEGTVTITGNANLQSLTGLDNLTSSDTFTVTNNQTLNTLTLNALSTSNFITIYDNAQLQTINMPGLATVSERLIINTSTALQTISLGSGGLVSIKKIIIKDNPALTEIGGFTLANDTTGYVLEGILIQNNLALTSLNFFANVTEYRSGITIRNNSSLVDMDDFQNLRKSGRFIINNNSGLTSMDNFGNNLEVFGDLIISVNQNLTDISYLDDVIRIFEDLNISGNPTLDECCVLQRFYTNGAVVGSIAIYSNNANCNSIDDILDGCGEDGVIANDNCQDTSNPDQLDSDNDGIGDACDNCGTVANNNQLDSDGDGIGDACQTQAGTNTGFVGVSTNNPLSKFHVEDGDVFISNLNRGIIMKTPEGKCYRYQPKENGLLVGKQITCPQ
>NZ_CP019288.1|WP_160131033.1|4498038_4498698_-|ribulose-phosphate-3-epimerase
MSIKRIAPSILAADFANLQRDIEMVNQSEADWFHIDIMDGVFVPNISFGMPVLKAISKHATKTIDVHLMIVDPDRYIQTFADLGANVLTVHYEACPHLHRTLQAIKAAGMKAGVALNPHTNVNLLEDVIKDIDLVCIMSVNPGFGGQSFIENTFSKIKRLKDLIIEKGATTEIEIDGGVNDKNAKDLIDAGADVLVAGSFVFKSENPTATIANLKKIVS
>NZ_CP019288.1|WP_007096854.1|4498839_4499703_-|sigma-70-family-RNA-polymerase-sigma-factor
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQIALEKLTKANLRFVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAEQSRIVRLPLNKIGSINKINKTFAYLEQSHERIPSAEEIAKELDMTVNDVKESMKNSGRHVSMDAPLVEGEDSNLYDVLNSGESPNPDKELLHESLKTEIERALETLTPREADVIRLYFGLGNQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
>NZ_CP019288.1|WP_160131034.1|4499839_4500601_-|radical-SAM-protein
MTTVKIANLDGKPEIFHSIQGEGKNIGQPSVFIRTSLCNLHCIWCDTDYTWNWEKTRFAHVKDTDPTYTKYKMDELIISLTLEEIYEEVFKSGCKNIVLTGGEPMMQLDELSELMQFFNTKATDYFFEIETNGTLVPDATFEGLIHQYNVSPKLANSNNPKKLREKPEAYNYFSANEKAVFKFVISAENDLTEVLEICETYKIPNRKVYLMPEGTNPEALQKKQQWLIEICKKHQFNYTDRLHVHIYGDKRGV
>NZ_CP019288.1|WP_160131035.1|4500894_4502010_+|helix-turn-helix-domain-containing-protein
MGSNFFNFLLIAGAVQGFIFNGVTLLSRKKVDKVIIFLNLTVFFLSLNNLQAWLIAEEYRFDMFFLRQFLVPWYLFIMPMFYMFLIHYLKIQDKVKDYLKIAIVLFLVELIARIVLIASVPENDTSAIRIYTSTEEIINATFSIFLFCKCFQIIFKRSKLLDFIADYDNIKWLKIFLILGGFVLIFWVLAIILNNYFNDDRAYYPLRLATSILLYWIGYQGFFRYTIVHDRILLRGKLAELKSGNTQKVVVQTETNLVEKHQQEFENIANYIIAEQRFLDTKLSLEQLSDELEISAGHLSKLINTYSEYNFSDYINSLRVSQAKVFLKDDDFDNYTIVAIGLECGFNSRSTFYTAFKKFTDQTPSEYRKLS
>NZ_CP019288.1|WP_160131036.1|4502339_4503128_+|hypothetical-protein
MKIFKFLSVLIFISCASCGVDRVYTSASYGDLKSHTAKPEYQGKQEKALYVSAAYSKGKHNQLGNAEQYNDKKSIISANIHKSVTGKYYNYYYGIGGAFGNYTFIKGLDENVQDNERKNFFNVNSKVGINYTWTRKKFDFRFIGLEVAYHYEFGSYQDKLKELEEEYKDNSAILIFKEESMFSWNLYSEVVYKINKNNALEFGIFAGAIFLSPRERVNNRSSFVGYTLAYRYKRFTGSFVFSSASAADPIRGSRYGLTYRLD
>NZ_CP019288.1|WP_160131037.1|4503160_4503667_+|hypothetical-protein
MKKYIIIILLAPIFCVSQETSKIKFKSIAINPLSIYLENDSGGFAISADVGLSYKENIFLVSTQFGYEFAVFTTYLDSFSELSLLWGREFKLTSWLRWDGFAGLGYFYLKEGNFDIRGHDRNSTVGFPLISKLKCMIGNHFSLGIQLRGNFNSLQTIGSAGLILQVDF
>NZ_CP019288.1|WP_160131038.1|4503738_4505976_-|polyribonucleotide-nucleotidyltransferase
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYEQKDLGFLPLTVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYTAETQVMIQLMSHDENVMPDAMAGLAASAAIQLSDFPFECAISEARVGRVNGEFIINPTRAQLAESDIDMMIGASADSVMMVEGEMDEISEDEMADAIKFAHEAIKVQCAAQLRLAEAFGKKEVREYEGERTDADLEKKVHDMAYDKVYAIAKAGSAKHERSAAFAEIKADIKATFSEEELEDYGGLVSDYYRKAEKAAIRDLTLNEGLRLDGRKTDEIRPIWCEIDYLPSTHGSSIFTRGETQALATVTLGTSRDANKIDMPSFEGEENFYLHYNFPPFCTGEARPIRGTSRREVGHGNLAQRGLKGMIPESCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQMIRPVSGIAMGLISDAESGKYAVLSDILGDEDHLGDMDFKVTGTAEGITACQMDIKVKGLSYEILVNALKQARDGRLHILTKLTDTIATPNADVKEHAPTMVTRRIPNEFIGALIGPGGKVIQEMQKVTETTIVINEDPVTEEGIVEILGVGKAGIEAVMAKIDSLLFKPEKGSIYEVKVVKMLDFGAVVEYIEAPGNEVLLHISELAWERTDNVTDIVNMGDVLDVKYFGVDPKTRKEKVSRKAILPKPEGYVARPPRDDKRPSGGRDNRRDDRKPREDRKPREDKN
>NZ_CP019288.1|WP_160131039.1|4506142_4506412_-|30S-ribosomal-protein-S15
MYLTKEVKAEIFAKHGKSATDTGTSECQIALFTHRINHLTEHLKKNRKDYNTERSLVMLVGKRRSLLDYLKKTEINRYRAIIVELGLRK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP019288_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_17

4801966-4802092

Orphan

Consensus_repeat	Method
ATTGCCAAAATGATTATTGACAAAAAAGATTATAAGCCTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_17

>merge|NZ_CP019288|17|4801966-4802092|CRISPRCasFinder
ATTGCCAAAATGATTATTGACAAAAAAGATTATAAGCCTGCAACGTAAGTTTGCTTAAATTATTTTGGCAAAAATTCCACTCAGGAATTGCCAAAATGATTATTGATAAAAAAGATTATAAGCCTGC

>NZ_CP019288|17|16|4801966-4802092|CRISPRCasFinder
ATTGCCAAAATGATTATTGACAAAAAAGATTATAAGCCTGC	AACGTAAGTTTGCTTAAATTATTTTGGCAAAAATTCCACTCAGGA
ATTGCCAAAATGATTATTGATAAAAAAGATTATAAGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160131285.1\|4806537_4807725_+\|elongation-factor-Tu	unknown	unknown	gnl\|CDD\|183708
NZ_CP019288.1\|WP_160131273.1\|4792871_4793270_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP019288.1\|WP_160131276.1\|4796703_4796931_+\|PspC-domain-containing-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131272.1\|4792548_4792860_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP019288.1\|WP_160131966.1\|4795926_4796589_+\|protease	unknown	unknown	gnl\|CDD\|372084
NZ_CP019288.1\|WP_160131282.1\|4804236_4804431_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP019288.1\|WP_160131286.1\|4807874_4808075_+\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|376355
NZ_CP019288.1\|WP_160131290.1\|4809891_4810413_+\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632
NZ_CP019288.1\|WP_160131274.1\|4793275_4794142_-\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|376354
NZ_CP019288.1\|WP_160131288.1\|4808726_4809164_+\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP019288.1\|WP_160131271.1\|4791284_4791956_+\|redoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|239267
NZ_CP019288.1\|WP_160131283.1\|4804693_4805581_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|274042
NZ_CP019288.1\|WP_160131278.1\|4798058_4799645_+\|amino-acid-carrier-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP019288.1\|WP_160131284.1\|4805632_4805932_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|238308
NZ_CP019288.1\|WP_160131277.1\|4796934_4797942_+\|NAD-binding-protein	unknown	unknown	gnl\|CDD\|367001
NZ_CP019288.1\|WP_160131281.1\|4802302_4803682_+\|alpha-amylase	unknown	unknown	gnl\|CDD\|236518
NZ_CP019288.1\|WP_160131279.1\|4799717_4800824_+\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378965
NZ_CP019288.1\|WP_160131289.1\|4809176_4809866_+\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP019288.1\|WP_160131275.1\|4794301_4795579_+\|DUF2851-family-protein	unknown	unknown	gnl\|CDD\|378539
NZ_CP019288.1\|WP_160131287.1\|4808099_4808651_+\|transcription-termination/antitermination-factor-NusG	unknown	unknown	gnl\|CDD\|180161

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160131285.1\|4806537_4807725_+\|elongation-factor-Tu	gnl\|CDD\|183708	PRK12735, PRK12735, elongation factor Tu; Reviewed.	0
NZ_CP019288.1\|WP_160131273.1\|4792871_4793270_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.18563e-23
NZ_CP019288.1\|WP_160131283.1\|4804693_4805581_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|274042	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC. The phage integrase family describes a number of recombinases with tyrosine active sites that transiently bind covalently to DNA. Many are associated with mobile DNA elements, including phage, transposons, and phase variation loci. This model represents XerC, one of two closely related chromosomal proteins along with XerD (TIGR02225). XerC and XerD are site-specific recombinases which help resolve chromosome dimers to monomers for cell division after DNA replication. In species with a large chromosome and homologs of XerC on other replicons, the chomosomal copy was preferred for building this model. This model does not detect all XerC, as some apparent XerC examples score in the gray zone between trusted (450) and noise (410) cutoffs, along with some XerD examples. XerC and XerD interact with cell division protein FtsK. [DNA metabolism, DNA replication, recombination, and repair].	8.08951e-107
NZ_CP019288.1\|WP_160131272.1\|4792548_4792860_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	3.53503e-26
NZ_CP019288.1\|WP_160131966.1\|4795926_4796589_+\|protease	gnl\|CDD\|372084	pfam12388, Peptidase_M57, Dual-action HEIGH metallo-peptidase. The catalytic triad for this family of proteases is HE-H-H, which in many members is in the sequence motif HEIGH.	9.16983e-47
NZ_CP019288.1\|WP_160131282.1\|4804236_4804431_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.37487e-12
NZ_CP019288.1\|WP_160131286.1\|4807874_4808075_+\|preprotein-translocase-subunit-SecE	gnl\|CDD\|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	3.77521e-09
NZ_CP019288.1\|WP_160131290.1\|4809891_4810413_+\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	9.68545e-47
NZ_CP019288.1\|WP_160131274.1\|4793275_4794142_-\|redoxin-domain-containing-protein	gnl\|CDD\|376354	pfam00578, AhpC-TSA, AhpC/TSA family. This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).	1.20392e-15
NZ_CP019288.1\|WP_160131288.1\|4808726_4809164_+\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	6.05781e-85
NZ_CP019288.1\|WP_160131271.1\|4791284_4791956_+\|redoxin-domain-containing-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	4.42464e-70
NZ_CP019288.1\|WP_160131278.1\|4798058_4799645_+\|amino-acid-carrier-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	3.28583e-151
NZ_CP019288.1\|WP_160131284.1\|4805632_4805932_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|238308	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY, is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site. RaiA is also thought to counteract miscoding at the A site thus reducing translation errors. The RaiA fold structurally resembles the double-stranded RNA-binding domain (dsRBD).	8.0815e-15
NZ_CP019288.1\|WP_160131277.1\|4796934_4797942_+\|NAD-binding-protein	gnl\|CDD\|367001	pfam02254, TrkA_N, TrkA-N domain. This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD.	1.55111e-30
NZ_CP019288.1\|WP_160131281.1\|4802302_4803682_+\|alpha-amylase	gnl\|CDD\|236518	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed.	2.38479e-168
NZ_CP019288.1\|WP_160131279.1\|4799717_4800824_+\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|378965	pfam12836, HHH_3, Helix-hairpin-helix motif. The HhH domain is a short DNA-binding domain.	4.29274e-15
NZ_CP019288.1\|WP_160131289.1\|4809176_4809866_+\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	8.14321e-136
NZ_CP019288.1\|WP_160131275.1\|4794301_4795579_+\|DUF2851-family-protein	gnl\|CDD\|378539	pfam11013, DUF2851, Protein of unknown function (DUF2851). This bacterial family of proteins has no known function.	0
NZ_CP019288.1\|WP_160131287.1\|4808099_4808651_+\|transcription-termination/antitermination-factor-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	2.69293e-63

>NZ_CP019288.1|WP_160131279.1|4799717_4800824_+|helix-hairpin-helix-domain-containing-protein
MKNIKSYFKFVKAERSGILCIIFLIFIVQGIYFYTNPKKTPMLFADAEVAIYQQQIDSLKILSIEQRKPKIFPFNPNFISDYKGFTLGMSTEEIDRLHEFRETNKYVNSAKEFQTITKVSDSLLSVLQPYFKFPEWVTNKKKKKWNYKSYGSNEKDEVILEKIDLNKATIEELRKVYGIGEKLSARIVKYRASLGGFVTESQLENVYGLKPEVIQKVWKRFYLNKTNTFKNTEVVLEKVNLNKATIEELRKIYGIGEKLSARIVEYREKLGGFVMESQLKDVYGLKPEVIQKVWKRFYLEIPNITKVNVNTCSVDELQIIPYINYELADEIINERILREGFKTFEELTKIRNFPTNKIKIIELYLSIE
>NZ_CP019288.1|WP_160131278.1|4798058_4799645_+|amino-acid-carrier-protein
MKKYLLSLITILLPILTFGQEVAAEGIDQQIDAAFKPISDFFGNVIFFQIGGIPFVLILLVGSALFFTIYFGFVNIRRFPTAINVVRGKYDEVDDHGIEKTDLPIDGDIPDTIRDESKDGEVTHFQALATAVSGTVGNGNIAGVALAIALGGPGATFWMIVCGLLGMSTKFVECTLGVQYRDVGEDGTVYGGPMYYLSRGLKEKGFATLGKITAVLFAIFCIGGSFGGGNAAQSNQATIVLKELMGLESTSAGAIIGVVLAILVGIIIIGGIKRIASVTEKIVPFMAVLYLVACLYIILSNFSLIDDAFGLIFSEAFNPTAIGVGGFIGVLLVGFKRAAFSNEAGAGSASIAHSAVKTKYSASEGLVALLEPFIDTVVICTMTALVIIIFNFGGAFEYGGDGAVMIDGVMVEGAGITSKAFAAYIPYSNLFLTVAVVLFAVSTMISWSYYGLQSWKYLFGRGKTADLVYKVLFLIFVVIGAAASMKSIWDFSDAMIFAMVFPNMVGLFFLFPVVKKQLKRYLDAIKGI
>NZ_CP019288.1|WP_160131277.1|4796934_4797942_+|NAD-binding-protein
MYRFFKSKFYLALSLLVIVFTIGVMGFHIISDMSWIDAIYMTTITITTVGFGEVVPLDQNARLFTVCLIIVSVFVLAYAISVITEYIISRSTLRNIIHRKTLKKIRSMENHIIICGFGRNGRQASEKLRAHDQEFIIIEKDRDVIERYEDVETYFIEGNASDDEILLKAGIEKASSLITALPSDADNLFVVLSARQINKELLIISRASQETSYKKLKLAGADNVIMPDRIGGEHMASLVVVPDLIEFIDKLSISGKNTTNIEEINIESLTSFDREISLKELDLRKETGCTVIGYKTPEGDYIINPEAELKLSPASKIIVLGRPEQVESLKRKYNL
>NZ_CP019288.1|WP_160131276.1|4796703_4796931_+|PspC-domain-containing-protein
MKFIYKLRYFFEKHGFGALSRLAERLGMRAKNVRLFFIYVTFATLGVSFAIYLTLAFILRLKDLIYTKRTSVFDL
>NZ_CP019288.1|WP_160131966.1|4795926_4796589_+|protease
MNFMGEEGIAVEDMFFSYVQIDELAPTDPLAKHYRTSNLVKKLPRVITISVDPDLGTLGSDALDVTITMYNNLGLRLSFARVAFGQRGKNKANIEVTEFYELESGGYITLGRAAGFPTRKGDPAKGFGINSRWFELSISPTVNELAGTMAHEIGHCIGFRHTDYQTRQSCGQNVNEGSAGVGAIHINGTPTGSDSSSIMQSCGPAINFNNNDVTALEALY
>NZ_CP019288.1|WP_160131275.1|4794301_4795579_+|DUF2851-family-protein
MTVKEDFLYYLWKFGKLHLQKLETSQKETIQIINLGTHNHHAGPDFFNAQLRVGNQLWAGNVEMHVNASDWFVHHHEKDKNYDNVILHVVWNHDMDVHRKDNSVIPTIVLKDFTDFTQIQRYVTLMNSPKKWINCENEFPVLDDFQLENWLERLYLERLETKSIEIETLVKATKYDWEAVLFRLLAKGFGLKLNSEAFFEAACSVDFSTIRKLSAKQFSLEAFLFGIFGLLSQEVTQEKYYEQLLREYNYLTHKFEYAKKAAIPVQFFRTRPPNFPTIRASQLATLYHQQDNLFSKIITSTSIDELYTILRVATASFWETHYTFEKISPKRKKILSKNFIDVLLINSIIPLKYCYERYLGTSNIEDIFALLRTITPEKNSIIQKFSTKNIAIENAMHTQALLELKKKYCNAHQCLQCAVGNALLK
>NZ_CP019288.1|WP_160131274.1|4793275_4794142_-|redoxin-domain-containing-protein
MNSLLKSIFIVLFPAFAVFAMIDSFWYVLNTGITLLHITHLLTAASIVFFFSRIYIKPIPRTDSVLKPYTFSIFLGCLLASLALSLEEGVVFRLSCTIFNIILTLGWIIYLVWYSYFQKRNPDHNDILKVGKTLPLLTFENSKKEIVTTERFAGTPSIFMFYRGNWCPFCMAQIKEIINQHEELTKRNINTIFISSQPHGFSKKLAKKYPLDFQFLVDINCNVAKQLNIFTEYGLPFGFQIFGFKSDMILPTVVITDSNEKIIYTNETDQYRSRPEPSILLKIIDENV
>NZ_CP019288.1|WP_160131273.1|4792871_4793270_+|rhodanese-like-domain-containing-protein
MKFRKLAFVFILLSFISFFGCSTTPKENDITVAELHAFLEDANVVVLDVRTPEEIALGKITAEALEVDFYDAAFMEDTRSKITKDQTVYVYCRSGRRSAETVSKLRELGYLKTYNVEGGIIAWEAEGFAIEK
>NZ_CP019288.1|WP_160131272.1|4792548_4792860_+|rhodanese-like-domain-containing-protein
MADLSQKEWQEQFANDTNAVLLDVRTQDEVDEGHIPDAKHIDIFLGQGFIDEVKKLDASKNYYIYCRSGGRSGQACAVMNSIGFENTYNLMGGFSEWQGDKTN
>NZ_CP019288.1|WP_160131271.1|4791284_4791956_+|redoxin-domain-containing-protein
MKLIKLVLLSVLFMTFSCTDKKKADAKSETKTVVENVEKPTKEMTNGYQVGDIVKDFSLKNVDGKMVSMSNFSDAKGFIITFTCNTCPYSVAYEDRINELDKKYASKGYPVIAINPNNPDAKPGDSFEAMQTRAKEKGFTFPYILDDGQKVYPVFGASKTPHMYVLAKTPKGHQVKYIGAIDDNYKDAGAVSKRYVEDAVDALLAGKEVEVTTTKAIGCSIKV
>NZ_CP019288.1|WP_160131281.1|4802302_4803682_+|alpha-amylase
MKTTKIFYFLLISLFFISCSEDEITQENEQSTEAVKETVVTAKNNLKPIGSGVMMQAFYWDVPAGGTWWNVVKGKVDDWSNAGIDAIWLPPASKAQNGPFSMGYDPFDYFDFGEYNQMGSVETRFGSTAELQSLVNTAHNNGLSVIADIVLNHNSGGASEYNPFKGTSTYTDYQPMSGMFNRTYYDFHPNDYHANDEGAFGGFADLCHHKTYVQDWLWNNSNSVAKYYKNVIGFDGWRFDYVKGFAPWVIKDWKNAVGGFSVGEYWDANVNTLDWWTGQAEVSAFDFACYYKMKDAFSGNDLTKLNDDMLWKRNASKAVTFVANHDTDEIVNGKILAYAYILTHEGYPTIFYSDYEQWLDKNKLNNLIWIHNNLASGSTSIMYADNDEYIARRNGNNSAGIVVYINNSNSWQERWVETNWSNTRIKDFTGHSGWEPVTQGGKWVKIQAPPKSYSVWSVK
>NZ_CP019288.1|WP_160131282.1|4804236_4804431_+|30S-ribosomal-protein-S21
MLIIPVKEGENIDRALKRFKRKFDRTGGMRQLRARKHFSKPSVVRRAQIQKAQYIQNLRDQEEV
>NZ_CP019288.1|WP_160131283.1|4804693_4805581_+|tyrosine-type-recombinase/integrase
MTFTSFTEYLKLEKNYSVHTVTAYEKDLRSFSEFCETAYEDDNIKGVHYVQIRNWIVSLVETGLMNATINRKVSSLKTYYKYLLKTKQIEVSPLIKHKALKTSKKIQVPFSKKEMDQVLENIVFKNDFAGIRNKTIIEMLYATGMRRSELINLKESDIDYTLKTIKILGKRNKERIVPLLQKLEVQLKEYNTQRKSIAIHKTDELFLTAKGNKIYPNLVYRLINDYFSVASTKTKKSPHILRHTFATHLLNQGADLNAVKELLGHASLASTQVYTHNSLAELKNVYAKAHPRNKK
>NZ_CP019288.1|WP_160131284.1|4805632_4805932_+|ribosome-associated-translation-inhibitor-RaiA
MKVNMQSVNFTADRKLVDFIQRKMDKLETYYDKIVDADVYLKVENTSAKENKIAEVRVNIPGDDLMVKKQCRTFEEAMDEATSTLQRALLKRKEKVRTH
>NZ_CP019288.1|WP_160131285.1|4806537_4807725_+|elongation-factor-Tu
MAKATFDRSKPHLNIGTIGHVDHGKTTLTAAITKVLADAGFSEAKSFDQIDNAPEEKERGITINTSHVEYATANRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMPQTREHILLGRQVGIPRMVVFMNKVDMVDDEELIELVDMEVRDLLSFYEYDGDNGPVIAGSALGALNGEKKWVDTVLELMEAVDVWIEEPLREIDKPFLMPIEDVFSITGRGTVATGRIETGIANTGDPVEIIGMGAGKLTSTITGIEMFRQILDRGEAGDNAGILLRGIEKTQISRGMVICKPGSVTPHAKFKAEVYILKKEEGGRHTPFHTNYRPQFYVRTTDVTGTISLPEGVEMVMPGDNLTITVELLNTIAMNVGLRFAIREGGRTVGAGQVTEILD
>NZ_CP019288.1|WP_160131286.1|4807874_4808075_+|preprotein-translocase-subunit-SecE
MAGIVNYVKESFEELRTNVTWTAWPEAQRLTIVVAIFSIIFSLVIWGVDSAFAKALGFVYELVLGK
>NZ_CP019288.1|WP_160131287.1|4808099_4808651_+|transcription-termination/antitermination-factor-NusG
MADSNVKKWYVVRAVSGQENKIKAYIESEIVRLGLEDYVEEVLVPTEKVIQIRNGKKVNKEKVYFPGYIMIKANIAGEVTHVIKSVTNVIGFLGEVKGGDPVPLRQSEVNRMLGKVDELAVKTDNVAIPFTTGQTVKVIDGPFNGFNGTVEKINEEKRKLEVMVKIFGRKTPLELSYMQVEKI
>NZ_CP019288.1|WP_160131288.1|4808726_4809164_+|50S-ribosomal-protein-L11
MAKELSKVVKLQVRGGAANPSPPVGPALGAAGVNIMEFCKQFNARTQDKQGKIVPVVISVYKDKSFEFVVKTAPAAVQLMEAAKIKKGSGEPNRKKVASVTWEQVRAIAQDKMVDLNAFKVESAMSMVAGTARSMGLTVSGDKPF
>NZ_CP019288.1|WP_160131289.1|4809176_4809866_+|50S-ribosomal-protein-L1
MARVTKKQKEALAKVDRNKLYSVAEASSLVKEITNVKFDASVDIAVRLGVDPRKANQMVRGVVTLPHGTGKDVKVLALVTPDKEAEATEAGADYVGLDEYLAKIKGGWTDVDVIITMPSVMGKLGPLGRILGPRGLMPNPKTGTVTMDVAKAVTEVKAGKIDFKVDKTGIVHASIGKSSFSAEKIEGNAAELLQTLMKLKPTAAKGIYMKSVFMSSTMSPSIAVDPKTI
>NZ_CP019288.1|WP_160131290.1|4809891_4810413_+|50S-ribosomal-protein-L10
MTKEEKLVVIEELTAQLAENTNIYLTDISGLNAEATSDLRRACYKENIQLAVIKNTLLAKAMEASEKEFGELPEVLKGNTSLMFSETGNAPAKLIKEFRKKKKAKKPILKGAFIESAVYVGDDQLDVLVDIKSREELIGEIIGLLQSPAKNVVSALKSSGGKLAGIIKTLSER

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Crispr_ID: NZ_CP019288_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP019288_18

4950463-4950582

Orphan

Consensus_repeat	Method
ACGAATAACAAATAACGAATGTTGGAAAAGTATTTTAGTTAAAAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP019288_18

>merge|NZ_CP019288|18|4950463-4950582|CRISPRCasFinder
ACGAATAACAAATAACGAATGTTGGAAAAGTATTTTAGTTAAAAGTGAAAAGTGAAAAAACAAATCCACGAATAACGAATAACAAATAGCGAATGTTGGAAAAGTATTTTAGTTAAAAGT

>NZ_CP019288|18|17|4950463-4950582|CRISPRCasFinder
ACGAATAACAAATAACGAATGTTGGAAAAGTATTTTAGTTAAAAGT	GAAAAGTGAAAAAACAAATCCACGAATA
ACGAATAACAAATAGCGAATGTTGGAAAAGTATTTTAGTTAAAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP019288.1\|WP_160131374.1\|4955485_4956202_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP019288.1\|WP_160131376.1\|4957386_4957896_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP019288.1\|WP_160131363.1\|4941378_4941843_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131377.1\|4958066_4960091_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239240
NZ_CP019288.1\|WP_160131372.1\|4953707_4954148_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP019288.1\|WP_160131365.1\|4942653_4945233_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131366.1\|4945248_4946430_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131362.1\|4940763_4941360_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP019288.1\|WP_160131373.1\|4954246_4955104_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP019288.1\|WP_160131369.1\|4950729_4952358_-\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|178415
NZ_CP019288.1\|WP_160131378.1\|4960108_4960534_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|308978
NZ_CP019288.1\|WP_160131361.1\|4940240_4940489_+\|DUF3820-family-protein	unknown	unknown	gnl\|CDD\|378970
NZ_CP019288.1\|WP_160131368.1\|4948006_4949977_+\|von-Willebrand-factor-type-A-domain-containing-protein	unknown	unknown	gnl\|CDD\|378796
NZ_CP019288.1\|WP_160131360.1\|4939696_4940230_+\|DUF922-domain-containing-protein	unknown	unknown	gnl\|CDD\|368715
NZ_CP019288.1\|WP_160131359.1\|4939294_4939696_+\|OsmC-family-protein	unknown	unknown	gnl\|CDD\|376823
NZ_CP019288.1\|WP_160131367.1\|4946466_4947630_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131371.1\|4953129_4953672_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|377026
NZ_CP019288.1\|WP_160131375.1\|4956388_4957303_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227625
NZ_CP019288.1\|WP_160131364.1\|4941861_4942221_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP019288.1\|WP_160131370.1\|4952546_4952906_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|379266

Protein	Function_ID	Function_description	E-value
NZ_CP019288.1\|WP_160131374.1\|4955485_4956202_+\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	5.21125e-73
NZ_CP019288.1\|WP_160131376.1\|4957386_4957896_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	3.35024e-07
NZ_CP019288.1\|WP_160131359.1\|4939294_4939696_+\|OsmC-family-protein	gnl\|CDD\|376823	pfam02566, OsmC, OsmC-like protein. Osmotically inducible protein C (OsmC) is a stress -induced protein found in E. Coli. This family also contains a organic hydroperoxide detoxification protein that has a novel pattern of oxidative stress regulation.	7.09732e-17
NZ_CP019288.1\|WP_160131372.1\|4953707_4954148_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.16653e-17
NZ_CP019288.1\|WP_160131362.1\|4940763_4941360_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	8.98385e-33
NZ_CP019288.1\|WP_160131373.1\|4954246_4955104_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.00493e-75
NZ_CP019288.1\|WP_160131369.1\|4950729_4952358_-\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|178415	PLN02820, PLN02820, 3-methylcrotonyl-CoA carboxylase, beta chain.	0
NZ_CP019288.1\|WP_160131378.1\|4960108_4960534_+\|hypothetical-protein	gnl\|CDD\|308978	pfam03682, UPF0158, Uncharacterized protein family (UPF0158).	8.15581e-06
NZ_CP019288.1\|WP_160131361.1\|4940240_4940489_+\|DUF3820-family-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	3.20311e-33
NZ_CP019288.1\|WP_160131368.1\|4948006_4949977_+\|von-Willebrand-factor-type-A-domain-containing-protein	gnl\|CDD\|378796	pfam12034, DUF3520, Domain of unknown function (DUF3520). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 180 amino acids in length. This domain is found associated with pfam00092.	1.82854e-98
NZ_CP019288.1\|WP_160131360.1\|4939696_4940230_+\|DUF922-domain-containing-protein	gnl\|CDD\|368715	pfam06037, DUF922, Bacterial protein of unknown function (DUF922). This family of proteins has a conserved HEXXH motif, suggesting they are putative peptidases of zincin fold.	0.000354948
NZ_CP019288.1\|WP_160131375.1\|4956388_4957303_+\|hypothetical-protein	gnl\|CDD\|227625	COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism].	2.68081e-13
NZ_CP019288.1\|WP_160131377.1\|4958066_4960091_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239240	cd02930, DCR_FMN, 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain. DCR in E. coli is an iron-sulfur flavoenzyme which contains FMN, FAD, and a 4Fe-4S cluster. It is also a monomer, unlike that of its eukaryotic counterparts which form homotetramers and lack the flavin and iron-sulfur cofactors. Metabolism of unsaturated fatty acids requires auxiliary enzymes in addition to those used in b-oxidation. After a given number of cycles through the b-oxidation pathway, those unsaturated fatty acyl-CoAs with double bonds at even-numbered carbon positions contain 2-trans, 4-cis double bonds that can not be modified by enoyl-CoA hydratase. DCR utilizes NADPH to remove the C4-C5 double bond. DCR can catalyze the reduction of both natural fatty acids with cis double bonds, as well as substrates containing trans double bonds. The reaction is initiated by hybrid transfer from NADPH to FAD, which in turn transfers electrons, one at a time, to FMN via the 4Fe-4S cluster. The fully reduced FMN provides a hydrid ion to the C5 atom of substrate, and Tyr and His are proposed to form a catalytic dyad that protonates the C4 atom of the substrate and completes the reaction.	0
NZ_CP019288.1\|WP_160131371.1\|4953129_4953672_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|377026	pfam03358, FMN_red, NADPH-dependent FMN reductase.	1.10483e-33
NZ_CP019288.1\|WP_160131370.1\|4952546_4952906_+\|DoxX-family-protein	gnl\|CDD\|379266	pfam13564, DoxX_2, DoxX-like family. This family of uncharacterized proteins are related to DoxX pfam07681.	7.4321e-12

>NZ_CP019288.1|WP_160131368.1|4948006_4949977_+|von-Willebrand-factor-type-A-domain-containing-protein
MKKLVTLFILLAISSQVWAQKIEVSGTVTDDTGLPLPGASVIIKGTSTGKTTDFDGNYKVNTNNGAILVFTYVGFISQEVKVTSSIINVQLKQGGTLDEVVIVGYGSVKESKSLGYAVSTVESRSATRKERRRFRREARKNTKDAQNGTNNVLNGAASGVQVTSGNGQAIQIRGRSSLQNGYATQTSITSNESYKEINENIFKRTSLAPLSTFSIDVDKAAYSNIRRMINNGQKVPVDAVKIEEMINYFEYNYTQPIDTHPFAVHTEVGVTPWNKDTKLLKIALKGKEIPLAEIPPSNFTFLIDVSGSMSAQNKLPLLKSAFKLMVNKMRPEDKVAIVVYAGAAGLVLEPTSGDNKQKIMNALDNLQAGGSTAGGQGIELAYKIAVENFIKDGNNRVIMATDGDFNVGQTSTASMEKLIEEKRKSGVFLSVLGFGMGNYKHDKLEALADKGNGNHAYIDTMQEAHKIFGKEFGGTLYTIAKDVKLQLEFNPNIVQGYRLIGYENRLLADEDFKDDTKDAGELGAGHTVTALYEIIPVGVKTEYLKSVDDLKYTKTTTSSESFTKELLTVKLRYKKPNEDKSQELKTVVENVLTSKLSSDFKFTAAVALFGMQLKDSEFHNNSSLDNVIALAKSGRGEDKSGYRAEFIRLVESSVTK
>NZ_CP019288.1|WP_160131367.1|4946466_4947630_-|hypothetical-protein
MKQNSGPETQETIKGTNVTHIEKTNFQDKPIGNFVQSTETHWIEQSNDRQSVFTFQESFRDEWSVYLFDASRNMYIALDLHQKKIKYKSSASAEYKDLYKVAAVSSAPPQYIFKSLILYNQWYASGGEQRSGLPHQSMLKLNNLVLNFRGNLVHMVTGLETMRRSWIRIENSKTGMTNALLAQFIPNMVAMASQASNLVSLSSQGSVSIETAHTIVKTHLAEDQAQLTKAKADRARAQEGMRVALINLAAAKAELQGEKGFLNGFLTGITFTAYNPVKENIDKQNNAINTYNVNLIVANSAIETSQRTQNELREEQKTLQQLSIMRKAFVYFQNDLSAAENALSVGTNSADKALATTNKRLGDYYKDRAGKQMHQVFGWINSFIAAN
>NZ_CP019288.1|WP_160131366.1|4945248_4946430_-|hypothetical-protein
MQTDNSITEDLEKAMQKLSGILTSTDPNKPSQLWSAWHYLQVYSVWGLRIPSNEDTLKSTLKMSNPGKYPFFATMLQGNQKVHEASANFYTNVFPQVIKVGRNLLNTATDISPSDGDIFGVLIEMLNDKEFEGSLELIKDMQATAAENIEQAEKAEQDLAAFSTQLIEAQGILNISDAQLQSDTATSQATIDKAQGGPEVAGSLKNLQKMIDASKKDYEQYVVVASTTVTYVWVPFVGIVAAGIVAGIYGDKAIKELNALDEWTAKFEAANAKLGTALKSNQIQQLAQKSITETISANNTAITQTTVVKNAWEGILNSLGIVKDKVFAMTKITDEGEILKTTALVKAYARKAGKEWDKLLLPLKELTTNPYIVVEQKDKTIKEIAQDVQTQIN
>NZ_CP019288.1|WP_160131365.1|4942653_4945233_-|hypothetical-protein
MNTTHYLDSAYTERNLKSLGVFGYDDQRPDDGIFRNMTLSWNLLPKKTSYNDDIPCWFIFTDVLKIDADMILTQETAIFARRIEITPGAGIILDTTEDSDFDFMIFCQEIIVKEPINSGKLKITRINKDESIDTHFFTTDRTTNGASGFFWNGKRNTKIENYATRNIEATYLFEGEPLRVSLMALFQYATMLSTDNIGLAQGQFRWISSIAATANATLDLATQASASAMNLEATKAAGANALLVPILDLDIYSEDAKAFMQLLQQREVYWQSYQQLTHMDQQWADSAKTELALADNELDLDKRLEEQANNTYNQVLKARNIASKQLSSVLAEAVVKRFDFQAGIKIWERKKTIDEVFNLVTGVAEILMEIPAIVAAGPQMAAMPMMETAHAGLKIGKDGVDSARQIFKSKQKDKPVEIEMVDLSVGAVKAEAPPEKTEAEKKKEKLAKDKAAESQKKLIGSLSKAGSGAKKVFDAAMNISKISATADAMQASSADILSTSQGTVDASFANFSVQGLDVVTGGAQDWDNLALELDDSFENIAELKGIQGGTDYQLTLRKLIVVGKTLSMAKLSMAKAASDLATARMIRISKVKSVRILTSRLKNLSAKVKLDDSITQLIFNRVLDAKRAVYMAMETYRRAYEYFTLAQENALPQLPKITSSYSEFSRAVAQISSKKLQTSELAKSGAIPQTINEIEFNFTNEKIVEDLRKHGITTFHIGTNDTSFNGFGRVRFSCVRIFIDGLEENLNTKIKVDIATSGEYADKSPQSSLKTKRFVGMQTLKSFIYNSADESVIIDGDVAARYENDFFKPTPFTIWTIQIGRQDGEQLNLSEISGVRLVLKGEATPQISYAKKKPDNLKF
>NZ_CP019288.1|WP_160131364.1|4941861_4942221_+|hypothetical-protein
MEVKDILKEIKSNLLGLVGGKFEDLKSESKKDVQDFLNASKVKLERWTLLLAAGHISPEEYKWLVESQKDLVILKGLYAAGVSKIKLGHLKNSILDSVINTAIGLVAKTTDTSTEDANA
>NZ_CP019288.1|WP_160131363.1|4941378_4941843_+|hypothetical-protein
MKTRFYLVYLSALALLLVTSCVSLRSSVFDQYSYQKGTEIKVDATRLMDKADQQYDSLTAAIVNLETELEKMVEYEKNKPDNQISYAMWKMIADPNKKFIGGFLKLWKEKGAMSTFFATEAKGQVVEALDLILQYEGKKDPAAENKLKAILGLQ
>NZ_CP019288.1|WP_160131362.1|4940763_4941360_+|N-acetylmuramoyl-L-alanine-amidase
MIVLLDNGHGGLINGTYQTPGKRSPIWNDGSQLFEGEFNRAIVNGIIEDLTTLRIPYVNIAAEYRDVTLETRMSRANKFGSRNCFYLSVHSNAGGGHGSEVFTSPGNTKSDKIATVFGEEFKREFPNRRLRTDFSDGDLDKEENFYVLKRTRMPAILTENFFMDNEEECKSLLMTRDGRAKIIKYHVDAIKRVQQELF
>NZ_CP019288.1|WP_160131361.1|4940240_4940489_+|DUF3820-family-protein
MTDFPSKEAQQKLLIELAHAKMPFGKYKGKYLVNLPEFYLIWYRQKGFPKGKIGQQLAQMLDIKINGLEPIIYNIQRKFEKR
>NZ_CP019288.1|WP_160131360.1|4939696_4940230_+|DUF922-domain-containing-protein
MYKLLVVLCVFLFVQDEESIAWTQNQKLHWGNFEGEPKPNTGAVAITASGITYGFSSKTFSDSDKIEYTTDVEAQFYPDRSWYLKERVNDTILKHEQLHFDITELHARKLRKRIKNVKTTKNIQQVISKIYDEVSAELNKMQNDYDKGSEHSINYEGQVKWQKLIAKELQEHSRYRK
>NZ_CP019288.1|WP_160131359.1|4939294_4939696_+|OsmC-family-protein
MTSKVTYKGNLRTVSQHIKSGNEFITDAPTDNNGKGEAFSPTDTVATGLASCMLTVMGIKAEQLGVHMEGTTAEVTKTMASNPRRISKIEVKLNLPFEADTKTRKILENTANTCPVHYSLHPDIEKIVEFHWK
>NZ_CP019288.1|WP_160131369.1|4950729_4952358_-|acyl-CoA-carboxylase-subunit-beta
MDINFNKNEDHNKLLVSELRHRFAKVSLGGGQKRIDKHHSKGKMTARERIDFLLDTKKPSIEIGAFVGDEMYEEHGGCPSGGVVVKIGYVQGKQCIVVANDATVKAGAWFPITAKKNLRAQEISIENRLPIIYLVDSAGVYLPMQDEIFPDKEHFGRIFRNNAVMSSMGITQISAVMGSCVAGGAYLPIMSDEALIVDKTGSIFLAGSYLVKAAIGESIDNETLGGATTHCEISGVTDYKSKDDKDALTTIKNIVGKIGDYTPTGYNRVKAAKPKENPEEIFGILPKARHEQYDMKEIIKRVVDNSEFDEYKAGYGKSIITAYARIDGWAVGIVANQRKLVKTTKGEMQFGGVIYSDSADKATRFIANCNQKKIPLVFLQDVTGFMVGSKSEHGGIIKDGAKMVNAVSNSVVPKFTIIIGNSYGAGNYAMCGKAYDPRLIAAWPSAELAVMSGNSAAKVLLQIETASLKKKGEKITKEQEEELFNKIKSRYDRQISPYYAAARLWTDAIINPLDTRTWISMGIEAANQAPIEKPFNLGIIQV
>NZ_CP019288.1|WP_160131370.1|4952546_4952906_+|DoxX-family-protein
MKTQKIIYYVATGLLSMLMLFSAGMYILNNAEVSGMFTNFGYPTYIIYPLAIAKILGVIAIWQTKSQVLKEWAYAGFFFDLILAFFAHYMISDGEQGASIAGMVFLMTSYYLGKKIASN
>NZ_CP019288.1|WP_160131371.1|4953129_4953672_+|NAD(P)H-dependent-oxidoreductase
MKTIIAFAGSNSKTSINKQLATYAASLVENITVKVLDLNDYELPIYGIDEELENGIPETAEKFLKTVQEADGIVVSLAEHNGAYATVFKNIFDWMSRIDGKLWGNVPMLLMATSPGARGGQTVLDIAKGRFPYMGGNIVADYSLPSFNDHFIDGKIKDAGLLEKLQVEVAKFGTAVHKAS
>NZ_CP019288.1|WP_160131372.1|4953707_4954148_+|MarR-family-transcriptional-regulator
MGDISKDIQSKFPSDKVKALINIKYTANWMNSKENEFFKPFGISPQQYNILRILKGAGKAIKVQEIKDRMIERAPNATRLMDKLCAKEHIERIPCPEDRRVVHIAITDNGLKLLLKIEQNNEGINLLKNLSKEEAIQLSYLLDKIR
>NZ_CP019288.1|WP_160131373.1|4954246_4955104_+|pirin-family-protein
MKTLRNIAYKGNSDYVNMGGNLIRQPLPTQEIDKVDPFLLLHHYKYEVSPYSPGLSLSPHPHRGFEPVTFLFKGEQLHRDSLGNEGILEAGDVQWMTAGSGIIHDEGPSKNFTGTMEGIQLWVNLPKKHKMTTPKYQDIKAEQMPIISVENGKGSIKVVAGALNGHKGPVSTFTEINAFIANLEASGNITIPIPATHELLVYLLEGEAKVNNSETLEHGKLQMLTFKKDGEAITLEATKNSTILILSGEPIKEKIKSWGPYVMNSQTEIMEALRDYQDGKMGHLY
>NZ_CP019288.1|WP_160131374.1|4955485_4956202_+|pirin-family-protein
MKTTYHKANTRGKADHGWLKSQHSFSFANYHNPERMGFGKLRVLNDDIVQPNMGFGKHPHQNMEIISIPLSGALSHKDTMDNKREITVGEVQVMSAGTGLQHSEFNDSKTDEVSFLQLWIQPETKNVTPRYEQKKFDQTKQKNNFQTLVSPQNNIIVDSLWIHQQAYISLGNFDEGKTINFKLQDASNGIYIFLLEGEISVANETLETRDAIGISDATTVEIQTNKKSKILVIEVPMN
>NZ_CP019288.1|WP_160131375.1|4956388_4957303_+|hypothetical-protein
MGVCYAPYHQAATVKKSSYTKENVAADLKIISANNMTFIRTYTVQGCQKYLPELCKKNNIGLALGVWIFQKDSKSTNAEIDTALTQANAHPEMVKVIVIGNEVDLAINKYTVAEVKAAFDYAVAQLKLPKYSNITNVPLTICMTGAGPTNATWSPLLNIMQSYAFLTIYPWYGQKGNHESNPIKFPMTPGEITGNMQYSYENGMKQAIAAGLEVVIAEIGWPSHGDINAHTTWKDEVTNFNATCKWINGTNTYNKAFITMWFEMFDEPWKTAEGLWGPHWGIYGSGISPTIKTDKSKTPFTKCS
>NZ_CP019288.1|WP_160131376.1|4957386_4957896_+|CAP-domain-containing-protein
MLLILVTSTAISQTLTKEEKKLYDLIMEYRKENNLSVIPLSKSLTFVAKKHVEDLENNNPNQGTCNTHSWSNKGNWTPCCYTPDHSESKCMWNKPRELTSYLGNGFEIAMWQSQGAKAVDAINSWKKSSGHNVVMINLGMWKDIKWKAIGIAIYDTYAVVWFGRESDTN
>NZ_CP019288.1|WP_160131377.1|4958066_4960091_+|FAD-dependent-oxidoreductase
MKYKHIFEPLDLGFTTLKNRVLMGSMHTGLEEEKNGFERLAVFYGERAKGGVGLIVTGGMAPSVRGWLIPFSSRMSTRKHARKHKVITEAVHKNGGKICMQILHAGRYGHHPLNVAPSAIKSPITPFKPSKLSNSSVKRTIKSFANSATLAKMAGYDGVEIMGSEGYLINQFIAERTNQRDDEWGGNYANRMKFAVETVKAVREAVGDKFIIIYRLSMLDLVDKGSSWEEVVQLGKAIEKAGATIINTGIGWHESRIPTIATSVPRAAFAWITERMKKEVSLPLITSNRINMPSVAEKILADGQADMISMARPFLADAEWVNKAQEEKADEINTCIACNQACLDHIFKQKVASCLVNPRACHETEFDYKPASIKKKIAVIGAGPAGLAAATIAAQRGHEVTLFDDNKETGGQFNIAKQIPGKEEFYETIRYFNKQIELHKVTVKLNTRVTADELSQGDFEEIILATGIKPRTPKIDGITHEKVLSYVDVLKHKKPVGKRVAVIGAGGIGFDVSEYLSHDGESTSQNVDAWLAEWGIDKSLEARGGIENMKPNFHGSPREIFMFKRSKGKFGGNLGKTTGWIHRTNLKKKNVQFVGEVEYTKIDDLGLHYVQNDEAKILEVDNIVICAGQTPLKELMEPLQAKGLTVHIIGGADIAAELDAKRAIDQGCRLAAKL
>NZ_CP019288.1|WP_160131378.1|4960108_4960534_+|hypothetical-protein
MNTYDAKIIREIAQSLDCGEDCYLHKKTQEIITIPSDFELMEEEFQEIFEPFVTKVEKNKKDFIKFEVLESPESYKIMDKFAYQLADIEFGAKLTNILNARKPFQNFKLAIDDSEYRESWFAFKQKEIEKIVTSILEVSEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP019288_10	10.14\|2877718\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877718-2877747	30	NC_022111	Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence	94972-95001	5	0.833
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	GU169904	Staphylococcus phage SA1, complete genome	110153-110182	6	0.8
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MK448521	Streptococcus satellite phage Javan518, complete genome	10299-10328	6	0.8
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	NZ_LR214954	Mycoplasma neurolyticum strain NCTC10166 plasmid 4	17666-17695	6	0.8
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	MN855961	Bacteriophage sp. isolate 145, complete genome	12874-12903	6	0.8
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	HQ633071	Synechococcus phage S-SKS1 genomic sequence	31143-31172	6	0.8
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MN103543	Pseudomonas phage vB_PaeM_PS119XW, complete genome	276290-276319	6	0.8
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MK599315	Pseudomonas phage PA1C, complete genome	275678-275707	6	0.8
NZ_CP019288_10	10.20\|2878174\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878174-2878203	30	MK774614	Aeromonas phage CF8, complete genome	160901-160930	6	0.8
NZ_CP019288_10	10.23\|2878402\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878402-2878431	30	NC_012732	Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence	8748-8777	6	0.8
NZ_CP019288_10	10.32\|2879086\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879086-2879115	30	NZ_CP013506	Rhizobium sp. N1341 plasmid pRspN1341a, complete sequence	8364-8393	6	0.8
NZ_CP019288_10	10.32\|2879086\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879086-2879115	30	NZ_CP016798	Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence	5615-5644	6	0.8
NZ_CP019288_10	10.32\|2879086\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879086-2879115	30	NZ_CP019739	Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence	18307-18336	6	0.8
NZ_CP019288_10	10.32\|2879086\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879086-2879115	30	NC_047983	Lactobacillus phage Lb, complete genome	42842-42871	6	0.8
NZ_CP019288_18	18.1\|4950509\|28\|NZ_CP019288\|CRISPRCasFinder	4950509-4950536	28	NZ_CP015170	Acetobacter ascendens strain LMG 1591 plasmid unnamed2, complete sequence	96328-96355	6	0.786
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	JX469830	Uncultured bacterium plasmid pG527, complete sequence	28199-28227	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	163852-163880	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	60161-60189	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	80589-80617	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	80669-80697	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	18431-18459	7	0.759
NZ_CP019288_1	1.1\|219471\|29\|NZ_CP019288\|CRISPRCasFinder	219471-219499	29	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	159171-159199	7	0.759
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MK944322	Acinetobacter lwoffii strain M2a plasmid pAVAci176, complete sequence	45-74	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MT833282	Escherichia coli phage vB_EcoM_Shy, complete genome	78803-78832	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065652	UNVERIFIED: Campylobacter phage C11, complete genome	57342-57371	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG646671	Salmonella phage BPS17S6, complete genome	60859-60888	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065668	UNVERIFIED: Campylobacter phage A126, complete genome	23908-23937	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065647	UNVERIFIED: Campylobacter phage D#, complete genome	28223-28252	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	NC_011041	Escherichia coli bacteriophage rv5, complete sequence	84403-84432	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	KP869103	Escherichia coli O157 typing phage 5, complete genome	109252-109281	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MH051914	Enterobacteria phage vB_EcoM_IME338, complete genome	75732-75761	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MK524176	Escherichia phage PHB11, complete genome	62124-62153	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	KJ190158	Escherichia phage vB_EcoM_FFH2, complete genome	84372-84401	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN882542	Escherichia phage JN01,complete genome	85871-85900	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN850642	Escherichia phage navn, complete genome	62764-62793	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065664	UNVERIFIED: Campylobacter phage A132, complete genome	50392-50421	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	NC_031939	Salmonella phage BPS15Q2, complete genome	64084-64113	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG646670	Salmonella phage BPS15S6, complete genome	50767-50796	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	KP010413	Salmonella phage vB_SPuM_SP116, complete genome	76781-76810	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN850636	Escherichia phage dune, complete genome	26261-26290	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN655999	Shigella phage Z31, complete genome	27399-27428	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN994498	Phage NBEco004, complete genome	24891-24920	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MK295205	Shigella phage vB_SflM_004, complete genome	32442-32471	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG646669	Salmonella phage BPS17W1, complete genome	25915-25944	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065646	UNVERIFIED: Campylobacter phage D1, complete genome	47705-47734	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	KF055347	Escherichia phage JH2, complete genome	23839-23868	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN227145	Salmonella phage BPSELC-1, complete genome	64492-64521	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065666	UNVERIFIED: Campylobacter phage A12a, complete genome	30446-30475	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG963916	Escherichia phage PDX, complete genome	74473-74502	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MG065654	UNVERIFIED: Campylobacter phage C15, complete genome	30473-30502	7	0.767
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN481367	Salmonella phage D1-2, complete genome	24548-24577	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MT713136	Aeromonas phage AP1, complete genome	102134-102163	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MH791404	UNVERIFIED: Aeromonas phage Assk, partial genome	27828-27857	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MF498773	Aeromonas phage AS-szw, complete genome	4450-4479	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	AP022649	Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence	1234-1263	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_018511	Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence	4506-4535	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP031645	Bacillus anthracis strain MCCC 1A01412 plasmid p2, complete sequence	3632-3661	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP053969	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed1, complete sequence	575-604	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_007106	Bacillus cereus E33L plasmid pE33L8, complete sequence	915-944	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_016780	Bacillus cereus F837/76 plasmid pF837_10, complete sequence	8674-8703	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP040338	Bacillus luti strain FJ plasmid unnamed2, complete sequence	6603-6632	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP040338	Bacillus luti strain FJ plasmid unnamed2, complete sequence	18782-18811	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP013281	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-6-16K, complete sequence	12590-12619	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_011771	Bacillus cereus AH820 plasmid pAH820_10, complete sequence	8080-8109	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_001446	Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence	135-164	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP009648	Bacillus pseudomycoides strain BTZ plasmid pBTZ_3, complete sequence	5027-5056	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP009970	Bacillus cereus E33L plasmid pBCO_4, complete sequence	6340-6369	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP015729	Bacillus cereus strain A1 plasmid pBCA3, complete sequence	8114-8143	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP009345	Bacillus thuringiensis HD1002 plasmid 6, complete sequence	5611-5640	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_022783	Bacillus toyonensis BCT-7112 plasmid pBCT8, complete sequence	5626-5655	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP033792	Bacillus sp. FDAARGOS_527 plasmid unnamed5, complete sequence	8285-8314	7	0.767
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NZ_CP033792	Bacillus sp. FDAARGOS_527 plasmid unnamed5, complete sequence	17733-17762	7	0.767
NZ_CP019288_10	10.9\|2877338\|30\|NZ_CP019288\|CRISPRCasFinder	2877338-2877367	30	NZ_CP042384	Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence	24013-24042	7	0.767
NZ_CP019288_10	10.14\|2877718\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877718-2877747	30	NC_020060	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899a, complete sequence	73481-73510	7	0.767
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NZ_LR214939	Mycoplasma salivarium strain NCTC10113 plasmid 2	459598-459627	7	0.767
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	MT783706	Acinetobacter phage Aristophanes, complete genome	37777-37806	7	0.767
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	MN693549	Marine virus AFVG_25M89, complete genome	17084-17113	7	0.767
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	HQ634191	Cyanophage Syn10 genomic sequence	64302-64331	7	0.767
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	DQ149023	Synechococcus cyanophage syn9, complete genome	85718-85747	7	0.767
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	NC_008296	Synechococcus phage syn9, complete genome	85718-85747	7	0.767
NZ_CP019288_10	10.23\|2878402\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878402-2878431	30	NC_023614	Croceibacter phage P2559Y, complete genome	17997-18026	7	0.767
NZ_CP019288_10	10.24\|2878478\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878478-2878507	30	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	33162-33191	7	0.767
NZ_CP019288_10	10.24\|2878478\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878478-2878507	30	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	34506-34535	7	0.767
NZ_CP019288_10	10.24\|2878478\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878478-2878507	30	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	35178-35207	7	0.767
NZ_CP019288_10	10.28\|2878782\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878782-2878811	30	LC557520	Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome	124217-124246	7	0.767
NZ_CP019288_10	10.30\|2878934\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878934-2878963	30	KX905163	Clostridioides phage phiSemix9P1, complete genome	3155-3184	7	0.767
NZ_CP019288_10	10.31\|2879010\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879010-2879039	30	NZ_CP037942	Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence	55791-55820	7	0.767
NZ_CP019288_10	10.31\|2879010\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879010-2879039	30	NZ_CP027334	Escherichia coli strain 2013C-3277 plasmid unnamed3	105325-105354	7	0.767
NZ_CP019288_10	10.34\|2879238\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879238-2879267	30	NC_013516	Streptobacillus moniliformis DSM 12112 plasmid pSMON01, complete sequence	2126-2155	7	0.767
NZ_CP019288_10	10.34\|2879238\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879238-2879267	30	NZ_CP027399	Streptobacillus moniliformis strain FDAARGOS_310 plasmid unnamed, complete sequence	6620-6649	7	0.767
NZ_CP019288_10	10.34\|2879238\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879238-2879267	30	MG592441	Vibrio phage 1.063.O._10N.261.45.C7, partial genome	96069-96098	7	0.767
NZ_CP019288_10	10.35\|2879314\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879314-2879343	30	MF417889	Uncultured Caudovirales phage clone 10S_14, partial genome	37639-37668	7	0.767
NZ_CP019288_18	18.1\|4950509\|28\|NZ_CP019288\|CRISPRCasFinder	4950509-4950536	28	NZ_CP023307	Lactobacillus plantarum strain LLY-606 plasmid p.LLY60601, complete sequence	52053-52080	7	0.75
NZ_CP019288_10	10.1\|2876664\|30\|NZ_CP019288\|CRISPRCasFinder	2876664-2876693	30	NZ_AP014640	Leptolyngbya boryana IAM M-101 plasmid pLBX	173682-173711	8	0.733
NZ_CP019288_10	10.1\|2876664\|30\|NZ_CP019288\|CRISPRCasFinder	2876664-2876693	30	NZ_AP018205	Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome	457647-457676	8	0.733
NZ_CP019288_10	10.4\|2876892\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2876892-2876921	30	NC_011263	Borrelia recurrentis A1 plasmid pl6, complete sequence	1492-1521	8	0.733
NZ_CP019288_10	10.4\|2876892\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2876892-2876921	30	NZ_CP015507	Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence	357053-357082	8	0.733
NZ_CP019288_10	10.4\|2876892\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2876892-2876921	30	CP009912	Borreliella chilensis strain VA1 plasmid lp54, complete sequence	22223-22252	8	0.733
NZ_CP019288_10	10.5\|2876968\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2876968-2876997	30	AP014020	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S27-C18, * SEQUENCING IN PROGRESS *	1927-1956	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MF498774	Aeromonas phage AS-yj, partial genome	133763-133792	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_019538	Aeromonas phage CC2, complete genome	27720-27749	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MH791398	UNVERIFIED: Aeromonas phage Asswx_1, complete genome	13429-13458	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MN871442	UNVERIFIED: Aeromonas phage Aszh-1, complete genome	13285-13314	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	NC_048674	Aeromonas phage AS-sw, partial genome	10708-10737	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MF448340	Aeromonas phage AS-zj, complete genome	111900-111929	8	0.733
NZ_CP019288_10	10.8\|2877262\|30\|NZ_CP019288\|CRISPRCasFinder	2877262-2877291	30	MN871441	UNVERIFIED: Aeromonas phage AsSzw2, complete genome	147003-147032	8	0.733
NZ_CP019288_10	10.14\|2877718\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877718-2877747	30	NZ_CP023000	Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence	384218-384247	8	0.733
NZ_CP019288_10	10.14\|2877718\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877718-2877747	30	NZ_CP009691	Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence	157419-157448	8	0.733
NZ_CP019288_10	10.14\|2877718\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877718-2877747	30	NZ_CP016416	Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence	89967-89996	8	0.733
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	AP013658	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S33-C129, * SEQUENCING IN PROGRESS *	2435-2464	8	0.733
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	MN693103	Marine virus AFVG_25M539, complete genome	12813-12842	8	0.733
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NZ_CP015865	Vibrio campbellii CAIM 519 = NBRC 15631 strain ATCC 25920, CAIM 519T plasmid unnamed, complete sequence	6143-6172	8	0.733
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NZ_CP049202	Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence	7920-7949	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897276	Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897280	Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897275	Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897277	Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897278	Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KT897279	Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence	1943-1972	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	MT074137	Bacteroides phage DAC16, complete genome	20329-20358	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	MT074142	Bacteroides phage DAC23, complete genome	21186-21215	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	MT074141	Bacteroides phage DAC22, complete genome	22028-22057	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	MT074139	Bacteroides phage DAC19, complete genome	21940-21969	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	MT074140	Bacteroides phage DAC20, complete genome	21940-21969	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NZ_KX258624	Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence	207941-207970	8	0.733
NZ_CP019288_10	10.17\|2877946\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877946-2877975	30	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	358610-358639	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MN694344	Marine virus AFVG_250M1167, complete genome	25570-25599	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MN693686	Marine virus AFVG_250M1168, complete genome	18685-18714	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MH937460	Streptococcus phage CHPC640, complete genome	15562-15591	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MH937473	Streptococcus phage CHPC929, complete genome	15338-15367	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	KY705258	Streptococcus phage P4761, complete genome	15701-15730	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MH937476	Streptococcus phage CHPC933, partial genome	15376-15405	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MH937463	Streptococcus phage CHPC676, complete genome	15666-15695	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	HE861935	Streptococcus phage TP-J34 complete genome	29469-29498	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	NC_002214	Streptococcus thermophilus bacteriophage Sfi11, complete genome	16265-16294	8	0.733
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	NC_022776	Streptococcus phage TP-778L complete genome	29087-29116	8	0.733
NZ_CP019288_10	10.22\|2878326\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878326-2878355	30	NZ_CP007796	Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence	498484-498513	8	0.733
NZ_CP019288_10	10.22\|2878326\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878326-2878355	30	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	870-899	8	0.733
NZ_CP019288_10	10.22\|2878326\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878326-2878355	30	NZ_CP032342	Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence	711822-711851	8	0.733
NZ_CP019288_10	10.22\|2878326\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878326-2878355	30	NZ_CP032325	Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence	195325-195354	8	0.733
NZ_CP019288_10	10.25\|2878554\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878554-2878583	30	KX397371	Erwinia phage vB_EamM_Parshik, complete genome	154872-154901	8	0.733
NZ_CP019288_10	10.25\|2878554\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878554-2878583	30	MT710307	Salmonella phage pSal-SNUABM-04, complete genome	152528-152557	8	0.733
NZ_CP019288_10	10.25\|2878554\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878554-2878583	30	KX397368	Erwinia phage vB_EamM_Huxley, complete genome	154605-154634	8	0.733
NZ_CP019288_10	10.25\|2878554\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878554-2878583	30	KX397370	Erwinia phage vB_EamM_Machina, complete genome	155491-155520	8	0.733
NZ_CP019288_10	10.27\|2878706\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878706-2878735	30	MT773555	Myoviridae sp. isolate BML_3 genomic sequence	26866-26895	8	0.733
NZ_CP019288_10	10.33\|2879162\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879162-2879191	30	MN694720	Marine virus AFVG_250M584, complete genome	13863-13892	8	0.733
NZ_CP019288_10	10.33\|2879162\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2879162-2879191	30	NC_029009	Enterococcus phage EFDG1, complete genome	62841-62870	8	0.733
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	NZ_CP032287	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.2, complete sequence	8358-8387	9	0.7
NZ_CP019288_10	10.7\|2877186\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877186-2877215	30	MN693005	Marine virus AFVG_117M50, complete genome	48236-48265	9	0.7
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NZ_CP010123	Escherichia coli strain C5 plasmid A, complete genome	109281-109310	9	0.7
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NC_001910	Buchnera aphidicola Sg plasmid pLeu-Sg, complete sequence	6335-6364	9	0.7
NZ_CP019288_10	10.15\|2877794\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2877794-2877823	30	NZ_CP029203	Buchnera aphidicola (Schizaphis graminum) isolate LNK plasmid p1	3639-3668	9	0.7
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	NC_021336	Bacillus phage MG-B1, complete genome	1403-1432	9	0.7
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	KF156338	Synechococcus phage S-MbCM7, complete genome	81422-81451	9	0.7
NZ_CP019288_10	10.18\|2878022\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878022-2878051	30	MK415399	CrAssphage apr34_000142F, complete genome	13750-13779	9	0.7
NZ_CP019288_10	10.25\|2878554\|30\|NZ_CP019288\|CRISPRCasFinder,PILER-CR	2878554-2878583	30	NZ_CP045400	Halomonas sp. THAF12 plasmid pTHAF12_a, complete sequence	35436-35465	9	0.7

1. spacer 10.14|2877718|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_022111 (Prevotella sp. oral taxon 299 str. F0039 plasmid, complete sequence) position: , mismatch: 5, identity: 0.833

aaagatgagcaaaaggaacttgatgatatt	CRISPR spacer
gctgatgagcaaaagaaacgtgatgatatt	Protospacer
.  ************.*** **********

2. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to GU169904 (Staphylococcus phage SA1, complete genome) position: , mismatch: 6, identity: 0.8

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaacaacaaaaagcacaagactgg	Protospacer
********* ************* * .* .

3. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK448521 (Streptococcus satellite phage Javan518, complete genome) position: , mismatch: 6, identity: 0.8

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
tttttaaaaaaacaaaaagcacacatttta	Protospacer
.* *  ***.**************.*****

4. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_LR214954 (Mycoplasma neurolyticum strain NCTC10166 plasmid 4) position: , mismatch: 6, identity: 0.8

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
atttctaaagaaaaaaaagcacatgtttta	Protospacer
 * * .****** **********.******

5. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN855961 (Bacteriophage sp. isolate 145, complete genome) position: , mismatch: 6, identity: 0.8

tttttattggtgctttatcttttgaaagta	CRISPR spacer
ctttaattggttctttatcttttgatattg	Protospacer
.*** ****** ************* * *.

6. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to HQ633071 (Synechococcus phage S-SKS1 genomic sequence) position: , mismatch: 6, identity: 0.8

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctaatagatgtgaagtattagaagaagaac	Protospacer
.***   .**************** *****

7. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN103543 (Pseudomonas phage vB_PaeM_PS119XW, complete genome) position: , mismatch: 6, identity: 0.8

gtttggtggatataatgttattaactccgc	CRISPR spacer
ggtcagtgaatataaagttattaactccga	Protospacer
* *..***.****** *************

8. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK599315 (Pseudomonas phage PA1C, complete genome) position: , mismatch: 6, identity: 0.8

gtttggtggatataatgttattaactccgc	CRISPR spacer
ggtcagtgaatataaagttattaactccga	Protospacer
* *..***.****** *************

9. spacer 10.20|2878174|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK774614 (Aeromonas phage CF8, complete genome) position: , mismatch: 6, identity: 0.8

tacatgccaattaccaacagggttacccgt	CRISPR spacer
gctatgctaattaccaacagggttaccaga	Protospacer
  .****.******************* *

10. spacer 10.23|2878402|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_012732 (Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence) position: , mismatch: 6, identity: 0.8

aatcatataaatctgacggtgtttccagat	CRISPR spacer
agccaaccaactctgacggtgtttccagat	Protospacer
*..**  .** *******************

11. spacer 10.32|2879086|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP013506 (Rhizobium sp. N1341 plasmid pRspN1341a, complete sequence) position: , mismatch: 6, identity: 0.8

acaggcatgtaaagctttgattgataagga	CRISPR spacer
aaaatcatgtaaagcgttgattaataaggg	Protospacer
* *. ********** ******.******.

12. spacer 10.32|2879086|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP016798 (Lactobacillus brevis strain TMW 1.2112 plasmid pl12112-1, complete sequence) position: , mismatch: 6, identity: 0.8

-acaggcatgtaaagctttgattgataagga	CRISPR spacer
caccgccg-gtaaagctttaattgataaggt	Protospacer
 ** * *. **********.**********

13. spacer 10.32|2879086|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP019739 (Lactobacillus brevis strain TMW 1.2108 plasmid pl12108-5, complete sequence) position: , mismatch: 6, identity: 0.8

-acaggcatgtaaagctttgattgataagga	CRISPR spacer
tactgccg-gtaaagctttaattgataaggc	Protospacer
 ** * *. **********.**********

14. spacer 10.32|2879086|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_047983 (Lactobacillus phage Lb, complete genome) position: , mismatch: 6, identity: 0.8

-acaggcatgtaaagctttgattgataagga	CRISPR spacer
cacaaccg-gtaaagctttaattgataaggt	Protospacer
 ***. *. **********.**********

15. spacer 18.1|4950509|28|NZ_CP019288|CRISPRCasFinder matches to NZ_CP015170 (Acetobacter ascendens strain LMG 1591 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786

gaaaagtgaaaaaacaaatccacgaata	CRISPR spacer
catgcgtgaaaaagcaaatccaagaata	Protospacer
 * . ********.******** *****

16. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

17. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

18. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

19. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

20. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

21. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

22. spacer 1.1|219471|29|NZ_CP019288|CRISPRCasFinder matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

tgtctaagagcaaagcgataccaaaggca	CRISPR spacer
acgctttaagcaaagcgctaccaaaggca	Protospacer
   **  .********* ***********

23. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK944322 (Acinetobacter lwoffii strain M2a plasmid pAVAci176, complete sequence) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
aaccataaagatcaaaaaacacacgtttta	Protospacer
   .*.***** ******.***********

24. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT833282 (Escherichia coli phage vB_EcoM_Shy, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

25. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065652 (UNVERIFIED: Campylobacter phage C11, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

26. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG646671 (Salmonella phage BPS17S6, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

27. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065668 (UNVERIFIED: Campylobacter phage A126, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

28. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065647 (UNVERIFIED: Campylobacter phage D#, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

29. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_011041 (Escherichia coli bacteriophage rv5, complete sequence) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

30. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KP869103 (Escherichia coli O157 typing phage 5, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

31. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MH051914 (Enterobacteria phage vB_EcoM_IME338, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

32. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK524176 (Escherichia phage PHB11, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaacaacaaaaagcgcaagactgg	Protospacer
********* **********.** * .* .

33. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KJ190158 (Escherichia phage vB_EcoM_FFH2, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

34. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN882542 (Escherichia phage JN01,complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

35. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN850642 (Escherichia phage navn, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

36. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065664 (UNVERIFIED: Campylobacter phage A132, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

37. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_031939 (Salmonella phage BPS15Q2, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

38. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG646670 (Salmonella phage BPS15S6, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

39. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KP010413 (Salmonella phage vB_SPuM_SP116, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

40. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN850636 (Escherichia phage dune, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

41. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN655999 (Shigella phage Z31, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

42. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN994498 (Phage NBEco004, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

43. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK295205 (Shigella phage vB_SflM_004, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

44. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG646669 (Salmonella phage BPS17W1, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

45. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065646 (UNVERIFIED: Campylobacter phage D1, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

46. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KF055347 (Escherichia phage JH2, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

47. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN227145 (Salmonella phage BPSELC-1, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

48. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065666 (UNVERIFIED: Campylobacter phage A12a, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

49. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG963916 (Escherichia phage PDX, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

50. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG065654 (UNVERIFIED: Campylobacter phage C15, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatacaaaaaacaaaaagaacaagactgg	Protospacer
*********.********* *** * .* .

51. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN481367 (Salmonella phage D1-2, complete genome) position: , mismatch: 7, identity: 0.767

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
ctatataaacaacaaaaagcacaagactgg	Protospacer
*****.*** ************* * .* .

52. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MT713136 (Aeromonas phage AP1, complete genome) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgagatcag	Protospacer
******* *.***************.   .

53. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MH791404 (UNVERIFIED: Aeromonas phage Assk, partial genome) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgagatcag	Protospacer
******* *.***************.   .

54. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MF498773 (Aeromonas phage AS-szw, complete genome) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgagatcag	Protospacer
******* *.***************.   .

55. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to AP022649 (Bacillus wiedmannii PL1 plasmid pBwiPL1-6 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

56. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_018511 (Bacillus thuringiensis HD-789 plasmid pBTHD789-5, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

57. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP031645 (Bacillus anthracis strain MCCC 1A01412 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

58. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP053969 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

59. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_007106 (Bacillus cereus E33L plasmid pE33L8, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

60. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_016780 (Bacillus cereus F837/76 plasmid pF837_10, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

61. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP040338 (Bacillus luti strain FJ plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

62. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP040338 (Bacillus luti strain FJ plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

63. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP013281 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-6-16K, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

64. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_011771 (Bacillus cereus AH820 plasmid pAH820_10, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

65. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_001446 (Bacillus thuringiensis sv israelensis HI4 plasmid pTX14-3, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

66. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP009648 (Bacillus pseudomycoides strain BTZ plasmid pBTZ_3, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

67. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP009970 (Bacillus cereus E33L plasmid pBCO_4, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

68. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP015729 (Bacillus cereus strain A1 plasmid pBCA3, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

69. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP009345 (Bacillus thuringiensis HD1002 plasmid 6, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

70. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_022783 (Bacillus toyonensis BCT-7112 plasmid pBCT8, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

71. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP033792 (Bacillus sp. FDAARGOS_527 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

72. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP033792 (Bacillus sp. FDAARGOS_527 plasmid unnamed5, complete sequence) position: , mismatch: 7, identity: 0.767

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagtacaggataaaatgtttggaaaagc	Protospacer
*****.********** ******...**

73. spacer 10.9|2877338|30|NZ_CP019288|CRISPRCasFinder matches to NZ_CP042384 (Leuconostoc pseudomesenteroides strain CBA3630 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

gagatgatgaagaataataaggtagcgata	CRISPR spacer
gatatgatgaagaaaaataaggttttaatg	Protospacer
** *********** ********  ..**.

74. spacer 10.14|2877718|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_020060 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899a, complete sequence) position: , mismatch: 7, identity: 0.767

aaagatgagcaaaaggaacttgatgatatt	CRISPR spacer
gctgctcagcaaaagaaacttgatcatatt	Protospacer
.  * * ********.******** *****

75. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 7, identity: 0.767

tttttattggtgctttatcttttgaaagta	CRISPR spacer
tttttattggcgcattatctttttttaatt	Protospacer
**********.** *********   *.*

76. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT783706 (Acinetobacter phage Aristophanes, complete genome) position: , mismatch: 7, identity: 0.767

tttttattggtgctttatcttttgaaagta	CRISPR spacer
gtaaaattgttgcttcatcttttgaaagca	Protospacer
 *   **** *****.************.*

77. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN693549 (Marine virus AFVG_25M89, complete genome) position: , mismatch: 7, identity: 0.767

tttttattggtgctttatcttttgaaagta	CRISPR spacer
tagctattggtgctttatctttagatgcta	Protospacer
*  .****************** ** . **

78. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to HQ634191 (Cyanophage Syn10 genomic sequence) position: , mismatch: 7, identity: 0.767

gtttggtggatataatgttattaactccgc	CRISPR spacer
atttgatggatctaatgttattaatggagc	Protospacer
.****.***** ************.   **

79. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to DQ149023 (Synechococcus cyanophage syn9, complete genome) position: , mismatch: 7, identity: 0.767

gtttggtggatataatgttattaactccgc	CRISPR spacer
atttgatggatctaatgttattaatggagc	Protospacer
.****.***** ************.   **

80. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_008296 (Synechococcus phage syn9, complete genome) position: , mismatch: 7, identity: 0.767

gtttggtggatataatgttattaactccgc	CRISPR spacer
atttgatggatctaatgttattaatggagc	Protospacer
.****.***** ************.   **

81. spacer 10.23|2878402|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_023614 (Croceibacter phage P2559Y, complete genome) position: , mismatch: 7, identity: 0.767

aatcata----taaatctgacggtgtttccagat	CRISPR spacer
----atatcgctaaatctgacggtgtttacagta	Protospacer
    ***    ***************** ***

82. spacer 10.24|2878478|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attcaagccaaaacttaactcgccgatttg	CRISPR spacer
tttcaagacaaaactgaactcgccatcttt	Protospacer
 ****** ******* ********. .**

83. spacer 10.24|2878478|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attcaagccaaaacttaactcgccgatttg	CRISPR spacer
tttcaagacaaaactgaactcgccatcttt	Protospacer
 ****** ******* ********. .**

84. spacer 10.24|2878478|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

attcaagccaaaacttaactcgccgatttg	CRISPR spacer
tttcaagacaaaactgaactcgccatcttt	Protospacer
 ****** ******* ********. .**

85. spacer 10.28|2878782|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to LC557520 (Staphylococcus phage vB_SsapH-Golestan101-M DNA, complete genome) position: , mismatch: 7, identity: 0.767

acggtggtataattgcttttattagtagag	CRISPR spacer
ataaatgtataatcgtttttattagtagag	Protospacer
*...  *******.*.**************

86. spacer 10.30|2878934|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KX905163 (Clostridioides phage phiSemix9P1, complete genome) position: , mismatch: 7, identity: 0.767

--agtcgttttcaatatccattgataatatct	CRISPR spacer
ttaat--gtttaaatattcattgataatatca	Protospacer
  *.*   *** *****.*************

87. spacer 10.31|2879010|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP037942 (Escherichia coli strain CFSAN027350 plasmid pCFSAN027350, complete sequence) position: , mismatch: 7, identity: 0.767

aagttttaagttctgcatttaaccaaccta	CRISPR spacer
actttttaatttctgcatttagccaagatt	Protospacer
*  ****** ***********.****  *

88. spacer 10.31|2879010|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP027334 (Escherichia coli strain 2013C-3277 plasmid unnamed3) position: , mismatch: 7, identity: 0.767

aagttttaagttctgcatttaaccaaccta	CRISPR spacer
actttttaatttctgcatttagccaagatt	Protospacer
*  ****** ***********.****  *

89. spacer 10.34|2879238|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_013516 (Streptobacillus moniliformis DSM 12112 plasmid pSMON01, complete sequence) position: , mismatch: 7, identity: 0.767

aaattaataaattcctgtcaaaagatatta----	CRISPR spacer
aaattaataaattccagtaaaa----attgcaaa	Protospacer
*************** ** ***    ***.

90. spacer 10.34|2879238|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP027399 (Streptobacillus moniliformis strain FDAARGOS_310 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.767

aaattaataaattcctgtcaaaagatatta----	CRISPR spacer
aaattaataaattccagtaaaa----attgcaaa	Protospacer
*************** ** ***    ***.

91. spacer 10.34|2879238|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MG592441 (Vibrio phage 1.063.O._10N.261.45.C7, partial genome) position: , mismatch: 7, identity: 0.767

aaatta--ataaattcctgtcaaaagatatta	CRISPR spacer
--ttcaacataaactcttgtcaaaagatattg	Protospacer
   *.*  *****.**.**************.

92. spacer 10.35|2879314|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MF417889 (Uncultured Caudovirales phage clone 10S_14, partial genome) position: , mismatch: 7, identity: 0.767

gttgcacttaggaatcaactcgtatctggg	CRISPR spacer
atcagttttaggaatcaactcgtatcttgg	Protospacer
.*..  .******************** **

93. spacer 18.1|4950509|28|NZ_CP019288|CRISPRCasFinder matches to NZ_CP023307 (Lactobacillus plantarum strain LLY-606 plasmid p.LLY60601, complete sequence) position: , mismatch: 7, identity: 0.75

gaaaagtgaaaaaacaaatccacgaata	CRISPR spacer
tgcctgggaaaaaacagatccacgaata	Protospacer
 .   * *********.***********

94. spacer 10.1|2876664|30|NZ_CP019288|CRISPRCasFinder matches to NZ_AP014640 (Leptolyngbya boryana IAM M-101 plasmid pLBX) position: , mismatch: 8, identity: 0.733

cacaaaaagtgctggagcattacgtgagac	CRISPR spacer
tgccaaaagtgatggagcattacgggatca	Protospacer
..* ******* ************ **

95. spacer 10.1|2876664|30|NZ_CP019288|CRISPRCasFinder matches to NZ_AP018205 (Leptolyngbya boryana NIES-2135 plasmid plasmid2 DNA, complete genome) position: , mismatch: 8, identity: 0.733

cacaaaaagtgctggagcattacgtgagac	CRISPR spacer
tgccaaaagtgatggagcattacgggatca	Protospacer
..* ******* ************ **

96. spacer 10.4|2876892|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_011263 (Borrelia recurrentis A1 plasmid pl6, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatcactaaaataatgagcgatattat	CRISPR spacer
ctagaggtataaaataatgagggatattat	Protospacer
  *.*    ************ ********

97. spacer 10.4|2876892|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP015507 (Bacillus oceanisediminis 2691 plasmid pBO1, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatcac-----taaaataatgagcgatattat	CRISPR spacer
-----ttccttacataaaaaaatgagcgatattat	Protospacer
     *. *     ***** ***************

98. spacer 10.4|2876892|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to CP009912 (Borreliella chilensis strain VA1 plasmid lp54, complete sequence) position: , mismatch: 8, identity: 0.733

aaaaatcactaaaataatgagcgatattat	CRISPR spacer
gcacaattttaaaataatgagcgctattat	Protospacer
. * * . .************** ******

99. spacer 10.5|2876968|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to AP014020 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C109A-MedDCM-OCT-S27-C18, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

gaaaagctttagaggctgccgaagtagata	CRISPR spacer
gaaaagatttagaggctgccaaaagttttg	Protospacer
****** *************.**.    *.

100. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MF498774 (Aeromonas phage AS-yj, partial genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

101. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_019538 (Aeromonas phage CC2, complete genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

102. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MH791398 (UNVERIFIED: Aeromonas phage Asswx_1, complete genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

103. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MN871442 (UNVERIFIED: Aeromonas phage Aszh-1, complete genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

104. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to NC_048674 (Aeromonas phage AS-sw, partial genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

105. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MF448340 (Aeromonas phage AS-zj, complete genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

106. spacer 10.8|2877262|30|NZ_CP019288|CRISPRCasFinder matches to MN871441 (UNVERIFIED: Aeromonas phage AsSzw2, complete genome) position: , mismatch: 8, identity: 0.733

agaagcacaggataaactgtttgaggaata	CRISPR spacer
agaagcaaaagataaactgtttgaaatcag	Protospacer
******* *.**************..   .

107. spacer 10.14|2877718|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP023000 (Rhizobium sp. 11515TR strain 10195 plasmid p11515TR-B, complete sequence) position: , mismatch: 8, identity: 0.733

aaagatgagcaaaaggaacttgatgatatt	CRISPR spacer
gctgcccagcaaaagaaacttgatcatatt	Protospacer
.  * . ********.******** *****

108. spacer 10.14|2877718|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP009691 (Bacillus mycoides strain ATCC 6462 plasmid pBMX_1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagatgagcaaaaggaacttgatgatatt	CRISPR spacer
gtgtagaaacaaaaggatcttgatgatatt	Protospacer
. . * .*.******** ************

109. spacer 10.14|2877718|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP016416 (Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence) position: , mismatch: 8, identity: 0.733

aaagatgagcaaaaggaacttgatgatatt	CRISPR spacer
aaacatgagcaaaaggaacttcaaagtcgg	Protospacer
*** ***************** * ..*

110. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to AP013658 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C24-MedDCM-OCT-S33-C129, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.733

tttttattggtgctttatcttttgaaagta	CRISPR spacer
tttttattggtcctttatctattggttcat	Protospacer
*********** ******** ***.

111. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN693103 (Marine virus AFVG_25M539, complete genome) position: , mismatch: 8, identity: 0.733

tttttattggtgctttatcttttgaaagta	CRISPR spacer
tttttattggtcctttatctattggttcat	Protospacer
*********** ******** ***.

112. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP015865 (Vibrio campbellii CAIM 519 = NBRC 15631 strain ATCC 25920, CAIM 519T plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

tttttattggtgctttatcttttgaaagta	CRISPR spacer
aaactattggtgcgttatcttttgacccta	Protospacer
   .********* ***********   **

113. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP049202 (Escherichia coli strain PapRG-04-4 plasmid pIncFIB, complete sequence) position: , mismatch: 8, identity: 0.733

tttttattggtgctttatcttttgaaagta	CRISPR spacer
tcgctattggtgatttatcttttgatacag	Protospacer
*. .******** ************ *  .

114. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897276 (Clostridium botulinum strain INGR16-02E1 plasmid pINGR16-02E1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

115. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897280 (Clostridium botulinum strain FI1111E1 plasmid pFI1111E1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

116. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897275 (Clostridium botulinum strain IFR 12/29 plasmid p12/29, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

117. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897277 (Clostridium botulinum strain ST0210E1 plasmid pST0210E1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

118. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897278 (Clostridium botulinum strain FWSKR40E1 plasmid pFWSKR40E1, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

119. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KT897279 (Clostridium botulinum strain SWKR38E2 plasmid pSWKR38E2, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ctcaattgtgtgaagaatcagaagtattta	Protospacer
.* ************ **.*******

120. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT074137 (Bacteroides phage DAC16, complete genome) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ttaaatggtgtgatgtattagaaaatttat	Protospacer
****** ****** *********.    *.

121. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT074142 (Bacteroides phage DAC23, complete genome) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ttaaatggtgtgatgtattagaaaatttat	Protospacer
****** ****** *********.    *.

122. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT074141 (Bacteroides phage DAC22, complete genome) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ttaaatggtgtgatgtattagaaaatttat	Protospacer
****** ****** *********.    *.

123. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT074139 (Bacteroides phage DAC19, complete genome) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ttaaatggtgtgatgtattagaaaatttat	Protospacer
****** ****** *********.    *.

124. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT074140 (Bacteroides phage DAC20, complete genome) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
ttaaatggtgtgatgtattagaaaatttat	Protospacer
****** ****** *********.    *.

125. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_KX258624 (Bacillus thuringiensis strain INTA Fr7-4 plasmid pFR260, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
aagaattgtgtgatgtattagaattacccc	Protospacer
  .********** ********* **   *

126. spacer 10.17|2877946|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 8, identity: 0.733

ttaaattgtgtgaagtattagaagtagaac	CRISPR spacer
attgtatgtataaagtattagaagtagaag	Protospacer
 * .  ***.*.*****************

127. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN694344 (Marine virus AFVG_250M1167, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
atttagtggaaataatgttattaaagctaa	Protospacer
.***.***** *************  *..

128. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN693686 (Marine virus AFVG_250M1168, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
atttagtggaaataatgttattaaagctaa	Protospacer
.***.***** *************  *..

129. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MH937460 (Streptococcus phage CHPC640, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

130. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MH937473 (Streptococcus phage CHPC929, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

131. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KY705258 (Streptococcus phage P4761, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

132. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MH937476 (Streptococcus phage CHPC933, partial genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

133. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MH937463 (Streptococcus phage CHPC676, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

134. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to HE861935 (Streptococcus phage TP-J34 complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

135. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_002214 (Streptococcus thermophilus bacteriophage Sfi11, complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

136. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_022776 (Streptococcus phage TP-778L complete genome) position: , mismatch: 8, identity: 0.733

gtttggtggatataatgttattaactccgc	CRISPR spacer
gaaaggtggatttaatgttattaacgattc	Protospacer
*   ******* *************  . *

137. spacer 10.22|2878326|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.733

atacatgat-agaggaactgatgcagaaggt	CRISPR spacer
-tgagcggcgagaggaactgatgcagcaggt	Protospacer
 *. ..*.. **************** ****

138. spacer 10.22|2878326|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

atacatgat-agaggaactgatgcagaaggt	CRISPR spacer
-tgagcggcgagaggaactgatgcagcaggt	Protospacer
 *. ..*.. **************** ****

139. spacer 10.22|2878326|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP032342 (Azospirillum brasilense strain MTCC4038 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.733

atacatgat-agaggaactgatgcagaaggt	CRISPR spacer
-tgagcggcgagaggaactgatgcagcaggt	Protospacer
 *. ..*.. **************** ****

140. spacer 10.22|2878326|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.733

atacatgat-agaggaactgatgcagaaggt	CRISPR spacer
-tgagcggcgagaggaactgatgcagcaggt	Protospacer
 *. ..*.. **************** ****

141. spacer 10.25|2878554|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KX397371 (Erwinia phage vB_EamM_Parshik, complete genome) position: , mismatch: 8, identity: 0.733

cgtagcttaggtttgcgccagcttcataac	CRISPR spacer
cccggtaaaggtttgcgccagcttcttaat	Protospacer
* ..*.  ***************** ***.

142. spacer 10.25|2878554|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT710307 (Salmonella phage pSal-SNUABM-04, complete genome) position: , mismatch: 8, identity: 0.733

cgtagcttaggtttgcgccagcttcataac	CRISPR spacer
cccggtgaaggtttgcgccagcttcttaat	Protospacer
* ..*.  ***************** ***.

143. spacer 10.25|2878554|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KX397368 (Erwinia phage vB_EamM_Huxley, complete genome) position: , mismatch: 8, identity: 0.733

cgtagcttaggtttgcgccagcttcataac	CRISPR spacer
cccggtaaaggtttgcgccagcttcttaat	Protospacer
* ..*.  ***************** ***.

144. spacer 10.25|2878554|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KX397370 (Erwinia phage vB_EamM_Machina, complete genome) position: , mismatch: 8, identity: 0.733

cgtagcttaggtttgcgccagcttcataac	CRISPR spacer
cccggtaaaggtttgcgccagcttcttaat	Protospacer
* ..*.  ***************** ***.

145. spacer 10.27|2878706|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MT773555 (Myoviridae sp. isolate BML_3 genomic sequence) position: , mismatch: 8, identity: 0.733

tctgtataaggttgccaagtgtgttttgcg	CRISPR spacer
gatgtataagtttgccaagtttgtttctgt	Protospacer
  ******** ********* *****.

146. spacer 10.33|2879162|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN694720 (Marine virus AFVG_250M584, complete genome) position: , mismatch: 8, identity: 0.733

taaatattaaaaatagagtctcttttggat	CRISPR spacer
taaatattaaaaatagaatatctaaaataa	Protospacer
*****************.* ***   . *

147. spacer 10.33|2879162|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_029009 (Enterococcus phage EFDG1, complete genome) position: , mismatch: 8, identity: 0.733

taaatattaaaaatagagtctcttttggat	CRISPR spacer
aacatattaaaaaaagactctctttttagg	Protospacer
 * ********** *** ******** ..

148. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP032287 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.2, complete sequence) position: , mismatch: 9, identity: 0.7

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
aaccttcaagatcaaaaaacacacgtttta	Protospacer
   . . **** ******.***********

149. spacer 10.7|2877186|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MN693005 (Marine virus AFVG_117M50, complete genome) position: , mismatch: 9, identity: 0.7

ctatacaaagaacaaaaagcacacgtttta	CRISPR spacer
gccagtcaagaacaaatagcacaagtttta	Protospacer
 .  .. ********* ****** ******

150. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP010123 (Escherichia coli strain C5 plasmid A, complete genome) position: , mismatch: 9, identity: 0.7

tttttattggtgctttatcttttgaaagta	CRISPR spacer
ccgctattggtgatttatcttttgatacag	Protospacer
.. .******** ************ *  .

151. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_001910 (Buchnera aphidicola Sg plasmid pLeu-Sg, complete sequence) position: , mismatch: 9, identity: 0.7

tttttattggtgctttatcttttgaaagta	CRISPR spacer
gcgcatttggtgctttatcttttggaattg	Protospacer
 . .  ******************.** *.

152. spacer 10.15|2877794|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP029203 (Buchnera aphidicola (Schizaphis graminum) isolate LNK plasmid p1) position: , mismatch: 9, identity: 0.7

tttttattggtgctttatcttttgaaagta	CRISPR spacer
gcgcatttggtgctttatcttttggaattg	Protospacer
 . .  ******************.** *.

153. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NC_021336 (Bacillus phage MG-B1, complete genome) position: , mismatch: 9, identity: 0.7

gtttggtggatataatgttattaactccgc	CRISPR spacer
gattggtggatataatgttagtattgatag	Protospacer
* ****************** ** .  ..

154. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to KF156338 (Synechococcus phage S-MbCM7, complete genome) position: , mismatch: 9, identity: 0.7

gtttggtggatataatgttattaactccgc	CRISPR spacer
ttttggtggatatactgttagtaaagtaag	Protospacer
 ************* ***** ***  . .

155. spacer 10.18|2878022|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to MK415399 (CrAssphage apr34_000142F, complete genome) position: , mismatch: 9, identity: 0.7

gtttggtggatataatgttattaactccgc	CRISPR spacer
ttttggtggatataaagctattaatatttt	Protospacer
 ************** *.******. .. .

156. spacer 10.25|2878554|30|NZ_CP019288|CRISPRCasFinder,PILER-CR matches to NZ_CP045400 (Halomonas sp. THAF12 plasmid pTHAF12_a, complete sequence) position: , mismatch: 9, identity: 0.7

cgtagcttaggtttgcgccagcttcataac	CRISPR spacer
ttgagcttaggtttgcgccagcatcgctgg	Protospacer
.  ******************* **.. .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1049120 : 1065183

Shigella_phage(33.33%)

tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160128226.1\|1049120_1052213_-\|plate	baseplate J/gp47 family protein	NA	NA	NA	NA
WP_160128227.1\|1052215_1052629_-	GPW/gp25 family protein	E3SF05	Shigella_phage	7.9e-10	31.0
WP_160128228.1\|1052632_1052923_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_160128229.1\|1052944_1054687_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_160128230.1\|1054683_1055445_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_160128231.1\|1055447_1055603_-	hypothetical protein	NA	NA	NA	NA
WP_160128232.1\|1055602_1056076_-\|tail	phage tail protein	NA	NA	NA	NA
WP_160128233.1\|1056081_1056519_-\|tail	phage tail protein	NA	NA	NA	NA
WP_160128234.1\|1056604_1058527_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A1C3NFI6	Phage_NCTB	6.3e-09	28.7
WP_160128235.1\|1058559_1059105_-	hypothetical protein	NA	NA	NA	NA
WP_160128236.1\|1059097_1059664_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_160128237.1\|1059935_1060565_-	dTMP kinase	S5VV47	Pseudomonas_phage	2.2e-11	27.8
WP_160128238.1\|1061308_1061989_-	response regulator	NA	NA	NA	NA
WP_160128239.1\|1062001_1062796_-	sensor histidine kinase	NA	NA	NA	NA
WP_160128240.1\|1062795_1063461_-	hypothetical protein	NA	NA	NA	NA
WP_160128241.1\|1063478_1063853_-	hypothetical protein	NA	NA	NA	NA
WP_160128242.1\|1064087_1064609_+\|tail	tail fiber protein	NA	NA	NA	NA
WP_160128243.1\|1064661_1065183_+\|tail	tail fiber protein	NA	NA	NA	NA

DBSCAN-SWA_2

2978009 : 3041017

Acinetobacter_phage(14.29%)

protease,integrase,transposase,tail

attL 2975074:2975093|attR 3013103:3013122

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2975074:2975093	attL	NA	NA	NA	NA
WP_160129810.1\|2978009_2978858_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.5e-15	33.8
WP_160129811.1\|2978860_2979253_-\|transposase	transposase	NA	NA	NA	NA
WP_160129812.1\|2979486_2980221_-	geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_160129813.1\|2980222_2980861_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_160129814.1\|2980998_2982315_+	adenosylhomocysteinase	NA	NA	NA	NA
WP_160129815.1\|2982861_2984559_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_160129816.1\|2984636_2984810_+	hypothetical protein	NA	NA	NA	NA
WP_160129817.1\|2984926_2985832_+	hypothetical protein	NA	NA	NA	NA
WP_160129818.1\|2986184_2987861_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_160129819.1\|2988236_2988422_+	hypothetical protein	NA	NA	NA	NA
WP_160129820.1\|2988562_2989318_-	hypothetical protein	NA	NA	NA	NA
WP_160129821.1\|2989465_2990185_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_160129822.1\|2990181_2991186_-	hypothetical protein	NA	NA	NA	NA
WP_160129823.1\|2991231_2992146_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	6.6e-25	29.7
WP_160129824.1\|2992390_2994523_+	peptidase M3	NA	NA	NA	NA
WP_160129825.1\|2994845_2995106_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_160129826.1\|2995148_2995787_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_160129827.1\|2995869_2996316_-	DUF4199 family protein	NA	NA	NA	NA
WP_160129828.1\|2996485_2997814_+	insulinase family protein	NA	NA	NA	NA
WP_160129829.1\|2997821_2999915_+	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	1.0e-12	22.9
WP_160129830.1\|2999992_3000880_-	EamA family transporter	NA	NA	NA	NA
WP_160129831.1\|3001011_3001557_+	cation transporter	NA	NA	NA	NA
WP_160129832.1\|3002058_3004539_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_160129833.1\|3004802_3006014_+	SufS family cysteine desulfurase	Q2XUY6	environmental_halophage	1.1e-96	42.9
WP_160129834.1\|3006271_3007309_+\|protease	zinc metalloprotease	A0A2K9KZL9	Tupanvirus	1.1e-20	31.0
WP_160129835.1\|3007402_3007861_+	hypothetical protein	NA	NA	NA	NA
WP_160129836.1\|3007913_3008336_+	SufE family protein	NA	NA	NA	NA
WP_160129837.1\|3008350_3008677_+	DUF59 domain-containing protein	NA	NA	NA	NA
WP_160129838.1\|3008685_3009192_+	DUF2480 family protein	NA	NA	NA	NA
WP_160129839.1\|3009309_3010233_+	DUF3078 domain-containing protein	NA	NA	NA	NA
WP_160129840.1\|3010496_3011351_-	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_160129841.1\|3012377_3013016_+	hypothetical protein	NA	NA	NA	NA
WP_160129842.1\|3013127_3015527_-	hypothetical protein	NA	NA	NA	NA
3013103:3013122	attR	NA	NA	NA	NA
WP_160129843.1\|3015802_3017197_+	sensor histidine kinase	NA	NA	NA	NA
WP_160129844.1\|3017196_3017913_+	response regulator	NA	NA	NA	NA
WP_160129845.1\|3017931_3019158_+	hypothetical protein	NA	NA	NA	NA
WP_160129846.1\|3019353_3019554_+	hypothetical protein	NA	NA	NA	NA
WP_160129847.1\|3019635_3020847_-	GTPase HflX	NA	NA	NA	NA
WP_160129848.1\|3020931_3021894_+	endonuclease	NA	NA	NA	NA
WP_160129849.1\|3021986_3027437_+	gliding motility-associated C-terminal domain-containing protein	NA	NA	NA	NA
WP_160129850.1\|3027493_3028411_+	PorP/SprF family type IX secretion system membrane protein	NA	NA	NA	NA
WP_160129851.1\|3028431_3030312_+	OmpA family protein	NA	NA	NA	NA
WP_160129852.1\|3030425_3030818_+	hypothetical protein	NA	NA	NA	NA
WP_160129853.1\|3030827_3033416_+	DUF4132 domain-containing protein	NA	NA	NA	NA
WP_160129854.1\|3033415_3034093_+	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_160129855.1\|3034217_3035042_+	T9SS type A sorting domain-containing protein	NA	NA	NA	NA
WP_160129856.1\|3035257_3036175_+	hypothetical protein	NA	NA	NA	NA
WP_160129857.1\|3036328_3037180_+	hypothetical protein	NA	NA	NA	NA
WP_160129858.1\|3037466_3038042_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_160129859.1\|3038041_3038857_+	hypothetical protein	NA	NA	NA	NA
WP_160129860.1\|3038909_3040490_+\|tail	phage tail sheath family protein	J9PVC2	Bacillus_phage	7.0e-22	37.6
WP_160129861.1\|3040555_3041017_+\|tail	phage tail protein	T2KSM5	uncultured_phage	2.0e-22	45.0

DBSCAN-SWA_3

3338723 : 3347689

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160130092.1\|3338723_3340163_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	3.7e-78	40.6
WP_160130093.1\|3340175_3340721_-	hypothetical protein	NA	NA	NA	NA
WP_160130094.1\|3340740_3341943_-	UDP-N-acetyl-D-mannosamine dehydrogenase	A0A127AXI2	Bacillus_phage	9.0e-30	27.2
WP_160130095.1\|3341951_3343079_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.7e-30	30.3
WP_160130096.1\|3343109_3344369_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	8.5e-23	27.1
WP_160131923.1\|3344358_3345354_-	GDP-mannose 4,6-dehydratase	A0A2K9L4U8	Tupanvirus	3.2e-81	49.8
WP_160130097.1\|3345758_3346556_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA
WP_160130098.1\|3346615_3347689_-	Fic family protein	D7RWK9	Brochothrix_phage	2.9e-27	30.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP019288

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection