CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP047572	Escherichia coli strain 2EC1 plasmid p2EC1-1, complete sequence	0 crisprs	csa3	0	1
NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	1 crisprs	NA	1	2
NZ_CP047575	Escherichia coli strain 2EC1 plasmid p2EC1-4, complete sequence	0 crisprs	NA	0	0
NZ_CP047571	Escherichia coli strain 2EC1 chromosome, complete genome	11 crisprs	csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,cas3,DEDDh,DinG,c2c9_V-U4,WYL	38	7
NZ_CP047574	Escherichia coli strain 2EC1 plasmid p2EC1-3, complete sequence	0 crisprs	cas14j	0	4

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

6866 : 59508

Escherichia_phage(47.06%)

integrase,transposase

attL 5792:5806|attR 57561:57575

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5792:5806	attL	NA	NA	NA	NA
WP_001067858.1\|6866_7571_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001199192.1\|7684_8461_+	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA
WP_000742814.1\|8689_9715_+	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_000602738.1\|10136_10889_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_075322286.1\|12470_13745_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001053381.1\|13819_14593_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	5.5e-73	55.4
WP_021545039.1\|14592_15618_-\|transposase	IS21-like element ISEc57 family transposase	A0A2L1IVA1	Escherichia_phage	6.6e-74	44.1
WP_094309310.1\|16206_17364_-	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_164538741.1\|17353_18199_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_164538590.1\|18616_18754_+	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|18981_20475_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|20586_20892_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058657119.1\|20919_22134_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
WP_001447541.1\|22350_23235_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000898043.1\|23265_24189_-\|transposase	IS91-like element ISVsa3 family transposase	NA	NA	NA	NA
WP_001067858.1\|24276_24981_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_013362812.1\|26731_27700_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.6e-186	100.0
WP_013188475.1\|27734_28610_-	class A extended-spectrum beta-lactamase CTX-M-65	A0A1B0VBP7	Salmonella_phage	6.8e-152	98.9
WP_000434930.1\|29114_29741_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|29837_30542_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_011117601.1\|31186_31555_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_023171140.1\|31628_33380_-	arsenical pump-driving ATPase	NA	NA	NA	NA
WP_011117603.1\|33406_33769_-	arsenic metallochaperone ArsD family protein	NA	NA	NA	NA
WP_001286342.1\|33844_34390_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_024159726.1\|34398_35109_-	arsenical resistance protein ArsH	A0A2H4J5V6	uncultured_Caudovirales_phage	3.1e-94	72.5
WP_001175594.1\|35209_35533_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_044502555.1\|35637_36675_+	permease	NA	NA	NA	NA
WP_000521603.1\|36967_37585_-	hypothetical protein	NA	NA	NA	NA
WP_058649952.1\|37775_39332_-	AAA family ATPase	NA	NA	NA	NA
WP_000194575.1\|39594_40185_-	hypothetical protein	NA	NA	NA	NA
WP_000343085.1\|40184_40442_-	hypothetical protein	NA	NA	NA	NA
WP_000350635.1\|40795_42934_+	AAA family ATPase	NA	NA	NA	NA
WP_001044768.1\|43095_43512_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261287.1\|43508_43739_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_000741348.1\|44046_45612_+	ATP-binding protein	NA	NA	NA	NA
WP_000253407.1\|45668_46538_-	hypothetical protein	NA	NA	NA	NA
WP_000952231.1\|46539_47628_-	hypothetical protein	NA	NA	NA	NA
WP_000991830.1\|47925_48858_-	hypothetical protein	NA	NA	NA	NA
WP_000246635.1\|48861_49857_-	hypothetical protein	NA	NA	NA	NA
WP_001302628.1\|50537_50852_+	hypothetical protein	NA	NA	NA	NA
WP_000535297.1\|50904_51684_+	hypothetical protein	NA	NA	NA	NA
WP_001302707.1\|51734_52514_+\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	2.6e-54	96.4
WP_000239529.1\|52651_52927_-	hypothetical protein	NA	NA	NA	NA
WP_000633913.1\|52920_53565_-	AAA family ATPase	A0A222YXS3	Escherichia_phage	1.9e-39	43.0
WP_001103690.1\|53793_54765_+	hypothetical protein	A0A222YXF2	Escherichia_phage	7.4e-67	42.9
WP_000340829.1\|54769_55162_+	plasmid partitioning/stability family protein	NA	NA	NA	NA
WP_000457496.1\|55166_56438_-	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	1.4e-142	60.5
WP_000109071.1\|56437_56875_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	8.3e-26	48.4
WP_000618110.1\|56871_57120_-	DinI-like family protein	Q2A098	Sodalis_phage	1.9e-14	48.0
WP_001330417.1\|57537_58440_+	DUF1281 domain-containing protein	NA	NA	NA	NA
57561:57575	attR	NA	NA	NA	NA
WP_000086137.1\|58824_59508_+	DNA methylase	A0A2I7RE86	Vibrio_phage	1.3e-30	36.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP047573

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047573_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047573_1

53576-53695

Orphan

Consensus_repeat	Method
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047573_1

>merge|NZ_CP047573|1|53576-53695|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCAGTGCGCAGCCATCCACCTTTCATGAAAATTACAGTGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

>NZ_CP047573|1|1|53576-53695|CRISPRCasFinder
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA	GTGCGCAGCCATCCACCTTTCATGAAAATTACAG
TGCGTACCCATCCACCTTTCAGTGCGTACCCATCCACCTTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047573.1\|WP_000844102.1\|49465_49663_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047573.1\|WP_011977766.1\|45723_46059_-\|C2H2-type-zinc-finger-protein	unknown	unknown	gnl\|CDD\|197676
NZ_CP047573.1\|WP_001568067.1\|46231_46513_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047573.1\|WP_001067858.1\|62337_63042_-\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP047573.1\|WP_001452812.1\|58368_59082_+\|DUF3363-domain-containing-protein	unknown	unknown	gnl\|CDD\|371759
NZ_CP047573.1\|WP_160177693.1\|61112_62285_-\|tetracycline-efflux-MFS-transporter-Tet(A)	unknown	unknown	gnl\|CDD\|340946
NZ_CP047573.1\|WP_001067858.1\|52746_53451_-\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP047573.1\|WP_001255015.1\|60540_60846_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|365891
NZ_CP047573.1\|WP_001694850.1\|49667_50309_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|377369
NZ_CP047573.1\|WP_105278499.1\|55996_56254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047573.1\|WP_001067858.1\|57575_58280_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP047573.1\|WP_000654811.1\|56290_57259_-\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|290455
NZ_CP047573.1\|WP_000075580.1\|48403_48559_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047573.1\|WP_000220560.1\|54797_55079_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_CP047573.1\|WP_001067858.1\|48699_49404_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP047573.1\|WP_000176305.1\|46566_47178_+\|DUF2913-family-protein	unknown	unknown	gnl\|CDD\|371392
NZ_CP047573.1\|WP_001326844.1\|47174_47336_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273806
NZ_CP047573.1\|WP_000121743.1\|54556_54808_+\|plasmid-stabilization-protein	unknown	unknown	gnl\|CDD\|179484
NZ_CP047573.1\|WP_001145103.1\|47362_48355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047573.1\|WP_058657119.1\|59298_60513_+\|chloramphenicol/florfenicol-efflux-MFS-transporter-FloR	unknown	unknown	gnl\|CDD\|273229

Protein	Function_ID	Function_description	E-value
NZ_CP047573.1\|WP_001067858.1\|52746_53451_-\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP047573.1\|WP_058657119.1\|59298_60513_+\|chloramphenicol/florfenicol-efflux-MFS-transporter-FloR	gnl\|CDD\|273229	TIGR00710, Bicyclomycin_resistance_protein_homolog, drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.	1.83433e-81
NZ_CP047573.1\|WP_011977766.1\|45723_46059_-\|C2H2-type-zinc-finger-protein	gnl\|CDD\|197676	smart00355, ZnF_C2H2, zinc finger.	0.000989117
NZ_CP047573.1\|WP_001255015.1\|60540_60846_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|365891	pfam00126, HTH_1, Bacterial regulatory helix-turn-helix protein, lysR family.	3.05505e-21
NZ_CP047573.1\|WP_000176305.1\|46566_47178_+\|DUF2913-family-protein	gnl\|CDD\|371392	pfam11140, DUF2913, Protein of unknown function (DUF2913). This family of proteins with unknown function appear to be restricted to Gammaproteobacteria.	2.71651e-14
NZ_CP047573.1\|WP_001694850.1\|49667_50309_-\|restriction-endonuclease	gnl\|CDD\|377369	pfam04471, Mrr_cat, Restriction endonuclease. Prokaryotic family found in type II restriction enzymes containing the hallmark (D/E)-(D/E)XK active site. Presence of catalytic residues implicates this region in the enzymatic cleavage of DNA.	8.41277e-25
NZ_CP047573.1\|WP_001452812.1\|58368_59082_+\|DUF3363-domain-containing-protein	gnl\|CDD\|371759	pfam11843, DUF3363, Protein of unknown function (DUF3363). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 323 to 658 amino acids in length.	2.94295e-103
NZ_CP047573.1\|WP_001067858.1\|57575_58280_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP047573.1\|WP_000654811.1\|56290_57259_-\|IS5-family-transposase	gnl\|CDD\|290455	pfam13737, DDE_Tnp_1_5, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis.	7.48746e-57
NZ_CP047573.1\|WP_000220560.1\|54797_55079_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	3.35296e-20
NZ_CP047573.1\|WP_001067858.1\|48699_49404_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP047573.1\|WP_001067858.1\|62337_63042_-\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.07441e-69
NZ_CP047573.1\|WP_001326844.1\|47174_47336_-\|hypothetical-protein	gnl\|CDD\|273806	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase). Several lines of evidence suggest that members of this family (loaded as a fragment mode model to find part-length matches) are associated with transposition, inversion, or recombination. Members are found in small numbers of genomes, but in large copy numbers in many of those species, including over 30 full length and fragmentary members in Treponema denticola. The strongest similarities are usually within rather than between species. PSI-BLAST shows similarity to proteins designated as possible transposases, DNA invertases (resolvases), and recombinases. In the oral pathogenic spirochete Treponema denticola, full-length members are often found near transporters or other membrane proteins. This family includes members of the putative transposase family pfam04754.	2.24526e-09
NZ_CP047573.1\|WP_000121743.1\|54556_54808_+\|plasmid-stabilization-protein	gnl\|CDD\|179484	PRK02854, PRK02854, primosomal protein DnaT.	2.40816e-08
NZ_CP047573.1\|WP_160177693.1\|61112_62285_-\|tetracycline-efflux-MFS-transporter-Tet(A)	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0

>NZ_CP047573.1|WP_001067858.1|52746_53451_-|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP047573.1|WP_001694850.1|49667_50309_-|restriction-endonuclease
MIPFPTTENLILWACSAIVLLAVVFFRRSVRHRRHKRKQQSARRVLERIKTLPGFPQKINYLRKIDPFVFEELLLEGFEAHGFRTIRNKRYTGDGGIDGQVIIGKYRYLIQAKRYRGHIALQHVQEFEKLLKRHNCRGLFCHTGKTGAGSKSVSIASERMEIISGQRLIDLLTPGSSFTIATAPQTMMKRTAATLETSTIVKDAGKENRYHES
>NZ_CP047573.1|WP_000844102.1|49465_49663_-|hypothetical-protein
MKSVTIEAKTFAEMLGITEGELIFAIKKTGTFKNKTIPQPHEPHKSNNRFLYSDVMRFIESLKDK
>NZ_CP047573.1|WP_001067858.1|48699_49404_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP047573.1|WP_000075580.1|48403_48559_-|hypothetical-protein
MSPVQAKQKQHERYEAVAVQVLRGRAGYKPAVKSRFSKSASSKFAHTIAFA
>NZ_CP047573.1|WP_001145103.1|47362_48355_-|hypothetical-protein
MPVQDVIPPYEQMYLLNQQLICNADQFKHAVITVGGQAVQYWISYYHAQYGDRLPDERLTTSVDCDYSARKDDIAAIAKTLNVKTWENKDGQPPSLAQFMLIDQDTHDIKRDDGRLFAVPDAPDEPNVVDIIDRPGGFDRSDFQGKKLYLYTAPFYVEATGPGMPEMNEKVRVLNPVACMRSRFSNLIALRRDAEIEIARINALKIPCYFFLIEQFDEQPFKVARGIFMDLWRLANDESCLRHQAFWHSWQGPLLEGQQSNNITLIDVLEGVHVYLEGHLDDFEIPEAFVTKEVPLKLAQLRERWERYVVLNAEWAARGRRGFERNPRDD
>NZ_CP047573.1|WP_001326844.1|47174_47336_-|hypothetical-protein
MCKPPEHTLIGRSEGERQATLKIARTMLQNGIDRNTVMKMTGLTEDDLAQIRH
>NZ_CP047573.1|WP_000176305.1|46566_47178_+|DUF2913-family-protein
MTLTEKTGHLAWCALVALALARQEQGELSPAQENLFLTRWLAAALKQRRFSRDVAQDIGWLLNQGRLLGVRAKLADKLGYVWRSCSGELTEQNDMFRLTYALETAKDMGWNYRVMSDREWAGRYALVLNPGVNGVYLLRTNLDAAFDDNGQQTNPLTVRLTGNVTGIMKLLNRCGWQAEPESDASLPHQFSLMARQGVPGKGD
>NZ_CP047573.1|WP_001568067.1|46231_46513_+|hypothetical-protein
MRVAESIILDALTRGGCIKTFYRISSRQAAESATRIPEGYILESPGEREDIVLSRADFHALEKLLEQKETWEQVVGVTCFGGATWQLRPTVQS
>NZ_CP047573.1|WP_011977766.1|45723_46059_-|C2H2-type-zinc-finger-protein
MKLMEELFTCPICKLSFGHKARLRKHIKKHTKSLEKNLAKANSTKKAEHEKMLIQERIARTGSAFKNESERNKYFERRRAENPIFDIDTPIRKASFIVNAGAFGLGKSRKN
>NZ_CP047573.1|WP_000121743.1|54556_54808_+|plasmid-stabilization-protein
MSYQILTTTAASITDLKKNPMGTVAEGEGDAVAILNRNEPAFYCVPPKLYAYYRELAEDAELNAVADERMKNPEIVKVNLDDL
>NZ_CP047573.1|WP_000220560.1|54797_55079_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MTYELAFDRRALKEWQKLGHTIREQFKKKLAERLENPRVPAARLHGHADRYKIKLRASGYRLVYQVIDEKVVLLVIAVGRRESSEVYQIADLR
>NZ_CP047573.1|WP_105278499.1|55996_56254_+|hypothetical-protein
MVIEAWLFDKPVHQAQSLNGVYHAVRLTTLSIGRSMQSDGKALSEKSLKTGPVSFALSTLPICSGACSNVKISFENNHPKALLNK
>NZ_CP047573.1|WP_000654811.1|56290_57259_-|IS5-family-transposase
MKDQITHPPDNTDHSVAKQKFRITNWSTYNKALINRGSLTFWLDDEAIQAWYESATPSSRGRPQRYSDLAITTVLVIKRVFRLTLRAAQGFIDSIFALMNVPLRCPDYTSVSKRAKSVNVSFKTSTRGEIAHLVIDSTGLKVFGEGEWKVRKHGKERRRIWRKLHLAVDSNTHEVVCADLSLNNVTDSEAFPGLIRQTHRKIRAAAADGAYDTRLCHDELRRKKISALIPPRKGAGYWPGEYADRNRAVANQRLSGSNARWKWTTEYNRRSIAETAMYRMKQLLGDSLTLRDYDGQVAEAMAMVRALNRMTKAGMPESVRIA
>NZ_CP047573.1|WP_001067858.1|57575_58280_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP047573.1|WP_001452812.1|58368_59082_+|DUF3363-domain-containing-protein
MGEKGVYSSYTCRVPGGDYEGYVDAHVRRLEALRRAGIVERIDADQWRIPDDLVSRAAAHDAGRDSQASVRVLSPVDLNKQIGSDGATWLDRRLIHGETADLAPTGFGQQVREAMDQRREHHIEQGDATRSRDSRVFYRRNLLAILREREVAGVGSDMALSKGLPFRAATDGESVSGKFTGTVHLSSGKFAVVEKSHEFTLVPWRPIIDRQLGREVMGIVQGGSVSWQLGRQRGLER
>NZ_CP047573.1|WP_058657119.1|59298_60513_+|chloramphenicol/florfenicol-efflux-MFS-transporter-FloR
MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGILNTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTAPAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGAWIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYTVGFSAGMGTYFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWGIAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAEFDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNGDTAWPVICYATAMAVLVSLGLVLLRLRGAATEKSPVV
>NZ_CP047573.1|WP_001255015.1|60540_60846_+|LysR-family-transcriptional-regulator
MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALGISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE
>NZ_CP047573.1|WP_160177693.1|61112_62285_-|tetracycline-efflux-MFS-transporter-Tet(A)
MLSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGCFLLPESHKGERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPALRRGLWRNSSNSRCT
>NZ_CP047573.1|WP_001067858.1|62337_63042_-|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KX518744	Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence	63874-63907	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041286	Escherichia coli strain 54 plasmid p54-tetX, complete sequence	64169-64202	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KU321583	Escherichia coli strain E80 plasmid pE80, complete sequence	38215-38248	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KT990220	Escherichia coli strain 42-2 plasmid p42-2, complete sequence	37006-37039	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP010164	Escherichia coli strain H2 plasmid A, complete sequence	20751-20784	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP019647	Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence	239581-239614	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	30266-30299	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP024467	Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence	17630-17663	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	16611-16644	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_LS999563	Escherichia coli isolate EC-TO143 plasmid 4, complete sequence	53074-53107	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP019284	Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence	32601-32634	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP047093	Salmonella sp. S13 plasmid pS13-4, complete sequence	1762-1795	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP051432	Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence	23725-23758	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP046002	Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence	35337-35370	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP045188	Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence	26770-26803	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	41390-41423	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP031548	Escherichia coli strain cq9 plasmid unnamed2, complete sequence	60962-60995	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032386	Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence	39391-39424	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032389	Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence	9889-9922	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_LT904873	Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2	5696-5729	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KT754163	Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence	12265-12298	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033383	Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence	7366-7399	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP020836	Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence	20407-20440	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP038140	Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence	93494-93527	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP043216	Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence	32193-32226	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP042617	Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence	25537-25570	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP031361	Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence	27033-27066	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP044153	Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence	25749-25782	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP040929	Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence	2187-2220	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033386	Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence	34721-34754	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041177	Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence	4942-4975	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP034761	Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence	47580-47613	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050707	Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence	14631-14664	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP047339	Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence	28949-28982	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_010860	Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence	32623-32656	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP022453	Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence	5893-5926	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP024153	Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence	53536-53569	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP030208	Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence	39815-39848	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP005994	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence	30028-30061	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032450	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence	29110-29143	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP010155	Escherichia coli strain D9 plasmid C, complete genome	14497-14530	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050174	Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence	58667-58700	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP029061	Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence	10786-10819	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP042589	Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence	29459-29492	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP025677	Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence	79278-79311	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041453	Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence	54169-54202	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MN816373	Escherichia coli strain A127 plasmid pA127-X1, complete sequence	29459-29492	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP052879	Escherichia coli strain C21 plasmid pC21-2, complete sequence	61147-61180	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033379	Escherichia coli strain L73 plasmid pL73-2, complete sequence	99797-99830	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	88012-88045	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050724	Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence	41949-41982	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP047573	Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence	53619-53652	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_019106	Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence	32551-32584	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP010127	Escherichia coli strain C8 plasmid B, complete genome	33248-33281	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	85971-86004	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP022072	Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence	18650-18683	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	20398-20431	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP043935	Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence	147056-147089	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP045998	Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence	35339-35372	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032394	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence	32800-32833	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_019256	Shigella sp. LN126 plasmid pLN126_33, complete sequence	2112-2145	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MH884649	Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence	16816-16849	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MH884651	Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence	68260-68293	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MH229869	Escherichia coli plasmid pKANJ7, complete sequence	90-123	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050713	Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence	33434-33467	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041439	Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence	96892-96925	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041443	Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence	63333-63366	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK461931	Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence	238663-238696	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK656937	Escherichia coli strain T3 plasmid pT3, complete sequence	37880-37913	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK731977	Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence	22155-22188	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK673546	Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence	28203-28236	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032447	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence	18380-18413	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	118004-118037	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MH179305	Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence	151970-152003	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MH287085	Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence	243053-243086	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MH287084	Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence	241163-241196	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP025558	Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence	11939-11972	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219825	Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence	90443-90476	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219826	Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence	43726-43759	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG904998	Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence	48918-48951	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG197491	Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence	33352-33385	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG197498	Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence	58347-58380	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG197503	Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence	61256-61289	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG197495	Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence	61256-61289	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MF589339	Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence	27964-27997	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG197502	Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence	61256-61289	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219818	Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence	43736-43769	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219820	Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence	80789-80822	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219822	Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence	38970-39003	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219823	Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence	73817-73850	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_023323	Escherichia coli ACN001 plasmid pACN001-A, complete sequence	18865-18898	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MF554637	uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence	14942-14975	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP016575	Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence	296-329	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP020060	Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence	30572-30605	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032994	Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence	10049-10082	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MN783746	Escherichia coli plasmid pIncX1_p1, complete sequence	5290-5323	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KX815983	Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence	40397-40430	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_KU254580	Escherichia coli strain YD786 plasmid pYD786-3, complete sequence	25507-25540	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP042633	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence	38916-38949	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032392	Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence	67739-67772	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP019272	Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence	35028-35061	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP053728	Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence	69102-69135	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP037995	Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281	7255-7288	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP053740	Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence	9971-10004	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP016580	Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence	23703-23736	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP046001	Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence	49989-50022	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP021103	Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence	56470-56503	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP029182	Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence	2302-2335	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MN086778	Escherichia coli plasmid p16EC-IncN, complete sequence	90173-90206	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP053047	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence	9874-9907	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP014974	Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence	295-328	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032397	Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence	220331-220364	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP035774	Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence	12757-12790	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP044182	Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence	25543-25576	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP042608	Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence	7171-7204	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MK461930	Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence	45261-45294	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_019046	Escherichia coli plasmid pNMEC31_31, complete sequence	31361-31394	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP047460	Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence	89191-89224	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP047466	Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence	30748-30781	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP035315	Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence	28493-28526	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050748	Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence	5878-5911	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_024961	Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence	905-938	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_021842	Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence	4017-4050	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_LT985261	Escherichia coli strain 657 plasmid RCS50_p, complete sequence	42585-42618	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_AP019678	Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence	49115-49148	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP009074	Escherichia coli ATCC 25922 plasmid unnamed, complete sequence	21137-21170	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP010168	Escherichia coli strain H3 plasmid A, complete genome	25682-25715	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_010378	Escherichia coli plasmid pOLA52, complete sequence	34562-34595	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	CP016512	Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence	23704-23737	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP016529	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence	23704-23737	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP016518	Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence	23705-23738	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032988	Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence	50710-50743	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP017633	Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence	23885-23918	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP012922	Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence	23704-23737	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033093	Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence	19532-19565	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP012926	Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence	37369-37402	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP023360	Escherichia coli strain 1943 plasmid p54, complete sequence	52726-52759	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	CP043734	Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence	37807-37840	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP039600	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence	32872-32905	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP030283	Escherichia coli strain E308 plasmid pLKSZ02, complete sequence	49947-49980	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_011204	Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence	70648-70681	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_017624	Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence	23689-23722	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050710	Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence	15569-15602	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP024290	Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence	33653-33686	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP048777	Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence	1446-1479	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041631	Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence	4799-4832	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050773	Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence	30707-30740	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP041444	Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence	38005-38038	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP019180	Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence	24566-24599	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050765	Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence	6593-6626	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_010422	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence	59434-59467	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050759	Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence	5734-5767	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_AP022652	Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence	295-328	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP024136	Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence	79478-79511	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	47119-47152	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MN436006	Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence	27492-27525	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MN436007	Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence	27131-27164	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	44664-44697	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP045839	Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence	48284-48317	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP032381	Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence	12454-12487	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG825381	Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence	43402-43435	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT197111	Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence	12897-12930	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219817	Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence	59284-59317	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219819	Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence	118931-118964	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	MT219821	Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence	3734-3767	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MG288677	Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence	29004-29037	0	1.0
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP030195	Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence	159-192	1	0.971
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP033353	Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence	78450-78483	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP050780	Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence	203947-203980	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP022061	Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence	1711-1744	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	CP048927	Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence	45611-45644	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP029841	Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence	98434-98467	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP028313	Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence	41569-41602	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP018662	Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence	41992-42025	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	CP049987	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence	41386-41419	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	CP049982	Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence	42740-42773	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NC_010421	Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence	27662-27695	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_MK625201	Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence	41824-41857	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP023476	Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence	33473-33506	2	0.941
NZ_CP047573_1	1.1\|53619\|34\|NZ_CP047573\|CRISPRCasFinder	53619-53652	34	NZ_CP044292	Escherichia coli strain P43A plasmid pP43A-1, complete sequence	44259-44292	4	0.882

1. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KX518744 (Escherichia coli strain HYEC7 plasmid pHYEC7-110, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

2. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041286 (Escherichia coli strain 54 plasmid p54-tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

3. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KU321583 (Escherichia coli strain E80 plasmid pE80, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

4. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KT990220 (Escherichia coli strain 42-2 plasmid p42-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

5. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP010164 (Escherichia coli strain H2 plasmid A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

6. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP019647 (Salmonella enterica subsp. enterica serovar Typhimurium strain TW-Stm6 plasmid pSTM6-275, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

7. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

8. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP024467 (Shigella dysenteriae strain BU53M1 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

9. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

10. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_LS999563 (Escherichia coli isolate EC-TO143 plasmid 4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

11. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP019284 (Escherichia coli strain 13P484A plasmid p13P484A-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

12. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP047093 (Salmonella sp. S13 plasmid pS13-4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

13. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP051432 (Escherichia sp. SCLE84 plasmid pSCLE2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

14. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP046002 (Escherichia coli strain 1916D6 plasmid p1916D6-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

15. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP045188 (Escherichia coli strain NT1F31 plasmid pNT1F31-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

16. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

17. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP031548 (Escherichia coli strain cq9 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

18. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032386 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N53043 plasmid pN53043_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

19. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032389 (Salmonella enterica subsp. enterica serovar Dublin strain CVM N45955 plasmid pN45955_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

20. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_LT904873 (Salmonella enterica subsp. enterica serovar Typhi strain ERL11909 plasmid 2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

21. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KT754163 (Shigella dysenteriae 1 strain A5468 plasmid pA5468, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

22. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033383 (Salmonella enterica subsp. enterica strain CFSA300 plasmid pCFSA300-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

23. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP020836 (Escherichia coli strain CFSAN051542 plasmid pCFSAN051542, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

24. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP038140 (Escherichia coli strain G3X16-2 plasmid pG3X16-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

25. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP043216 (Salmonella enterica subsp. enterica serovar Heidelberg strain SL-312 plasmid pET8.2-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

26. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP042617 (Escherichia coli strain NCYU-26-73 plasmid pNCYU-26-73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

27. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP031361 (Salmonella enterica subsp. enterica serovar Heidelberg strain 5 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

28. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP044153 (Shigella flexneri strain AR-0425 plasmid pAR-0425-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

29. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP040929 (Escherichia coli strain YY76-1 plasmid pYY76-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

30. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033386 (Salmonella enterica subsp. enterica strain CFSA1007 plasmid pCFSA1007-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

31. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041177 (Salmonella enterica subsp. enterica serovar Enteritidis strain SJTUF12367v2 plasmid p12367A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

32. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP034761 (Klebsiella pneumoniae strain NB5306 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

33. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050707 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE124 plasmid pSE124-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

34. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP047339 (Klebsiella pneumoniae strain 2019036D plasmid p2019036D-35kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

35. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_010860 (Salmonella enterica subsp. enterica serovar Enteritidis plasmid pSE34, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

36. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP022453 (Salmonella enterica subsp. enterica serovar Indiana strain D90 plasmid pD90-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

37. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP024153 (Escherichia coli strain 14EC033 plasmid p14EC033f, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

38. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP030208 (Salmonella enterica strain SA19992307 plasmid pSA19992307.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

39. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP005994 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002064 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

40. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032450 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69838 plasmid pSDU1-USMARC-69838, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

41. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP010155 (Escherichia coli strain D9 plasmid C, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

42. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050174 (Escherichia coli strain STB20-1 plasmid pSTB20-1T, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

43. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP029061 (Escherichia coli strain FORC_081 plasmid pFORC_081_4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

44. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP042589 (Escherichia coli strain PK6 plasmid pRHEcCUB-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

45. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP025677 (Escherichia albertii strain ChinaSP140150 plasmid pEA-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

46. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041453 (Escherichia coli strain YPE3 plasmid pYPE3-92k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

47. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MN816373 (Escherichia coli strain A127 plasmid pA127-X1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

48. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP052879 (Escherichia coli strain C21 plasmid pC21-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

49. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033379 (Escherichia coli strain L73 plasmid pL73-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

50. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

51. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050724 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE74 plasmid pSE74-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

52. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP047573 (Escherichia coli strain 2EC1 plasmid p2EC1-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

53. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_019106 (Salmonella enterica subsp. enterica serovar Dublin plasmid pSD_77, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

54. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP010127 (Escherichia coli strain C8 plasmid B, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

55. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

56. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP022072 (Salmonella enterica subsp. enterica serovar Typhimurium strain FDAARGOS_321 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

57. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

58. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP043935 (Klebsiella pneumoniae strain 555 plasmid pSCKLB555-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

59. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP045998 (Escherichia coli strain 1916D18 plasmid p1916D18-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

60. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032394 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22453 plasmid p22453_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

61. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_019256 (Shigella sp. LN126 plasmid pLN126_33, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

62. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MH884649 (Salmonella sp. strain Sa21 plasmid pSa21-IncX1-28K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

63. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MH884651 (Salmonella sp. strain Sa21 plasmid pSa21-TC-CIP, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

64. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MH229869 (Escherichia coli plasmid pKANJ7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

65. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050713 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE104 plasmid pSE104-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

66. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041439 (Escherichia coli strain YPE12 plasmid pYPE12-106k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

67. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041443 (Escherichia coli strain YPE12 plasmid pYPE12-101k-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

68. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK461931 (Escherichia coli strain F2_14D plasmid pF2_14D_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

69. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK656937 (Escherichia coli strain T3 plasmid pT3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

70. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK731977 (Escherichia coli strain ENV103 plasmid pSGMCR103, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

71. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK673546 (Salmonella enterica subsp. enterica serovar Typhimurium strain GDD27-24 plasmid pGDD27-24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

72. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032447 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69840 plasmid pSDU1-USMARC-69840, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

73. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

74. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MH179305 (Salmonella enterica subsp. enterica serovar Indiana strain JT01 plasmid pJT01, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

75. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MH287085 (Escherichia coli strain F2_12B plasmid pSDC-F2_12BHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

76. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MH287084 (Escherichia coli O157 strain SvETEC plasmid pSDE-SvHI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

77. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP025558 (Salmonella enterica subsp. enterica serovar Enteritidis strain PIR00532 plasmid p2PIR00532, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

78. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219825 (Escherichia coli strain RW7-1 plasmid pRW7-1_235k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

79. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219826 (Escherichia coli strain RW8-1 plasmid pRW8-1_122k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

80. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG904998 (Escherichia coli strain 15OD0495 plasmid p15ODTXV, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

81. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG197491 (Escherichia coli strain FKU92 plasmid pHNFKU92, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

82. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG197498 (Escherichia coli strain HZMCC14 plasmid pHNMCC14, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

83. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG197503 (Escherichia coli strain ZYTM118 plasmid pHNZY118, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

84. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG197495 (Escherichia coli strain AHC24 plasmid pHNAH24, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

85. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MF589339 (Escherichia coli strain 2271 plasmid pCTXM-2271, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

86. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG197502 (Escherichia coli strain ZYTF32 plasmid pHNZY32, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

87. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219818 (Escherichia coli strain RF148-1 plasmid pRF148-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

88. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219820 (Escherichia coli strain RF108-2 plasmid pRF108-2_97k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

89. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219822 (Escherichia coli strain RF14-1 plasmid pRF14-1_50k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

90. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219823 (Escherichia coli strain RF10-1 plasmid pRF10-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

91. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_023323 (Escherichia coli ACN001 plasmid pACN001-A, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

92. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MF554637 (uncultured bacterium clone AA-100 plasmid pPIMMR, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

93. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP016575 (Salmonella enterica subsp. enterica serovar Heidelberg strain AMR588-04-00435 plasmid pAMR588-04-00435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

94. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP020060 (Escherichia coli strain AR_0061 plasmid unitig_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

95. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032994 (Escherichia coli strain W5-6 plasmid p2_W5-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

96. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MN783746 (Escherichia coli plasmid pIncX1_p1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

97. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KX815983 (Salmonella enterica subsp. enterica serovar Dublin strain N13-01125 plasmid pN13-01125, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

98. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_KU254580 (Escherichia coli strain YD786 plasmid pYD786-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

99. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP042633 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-6, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

100. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032392 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 34981 plasmid p34981_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

101. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP019272 (Escherichia coli strain 13P460A plasmid p13P460A-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

102. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP053728 (Escherichia coli strain CP61_Sichuan plasmid pCP61-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

103. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP037995 (Salmonella enterica subsp. enterica serovar Brancaster strain sg_ww281 plasmid psg_ww281) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

104. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP053740 (Escherichia coli strain CP8-3_Sichuan plasmid pCP8-3-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

105. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP016580 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH13-006 plasmid pSH13-006_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

106. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP046001 (Escherichia coli strain 1916D6 plasmid p1916D6-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

107. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP021103 (Escherichia coli strain 13P477T plasmid p13P477T-7, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

108. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP029182 (Escherichia coli strain H9Ecoli plasmid p3-H9, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

109. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MN086778 (Escherichia coli plasmid p16EC-IncN, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

110. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP053047 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-tetX4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

111. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP014974 (Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1898 isolate ST073 plasmid pSTY3-1898, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

112. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032397 (Salmonella enterica subsp. enterica serovar Dublin strain CVM 22429 plasmid p22429, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

113. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP035774 (Klebsiella pneumoniae strain R46 plasmid pR46-27, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

114. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP044182 (Salmonella enterica subsp. enterica serovar Heidelberg strain AR-0404 plasmid pAR-0404-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

115. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP042608 (Escherichia coli strain NCYU-29-19 plasmid pNCYU-29-19-2_MCR3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

116. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MK461930 (Escherichia coli strain 2009_36 plasmid p2009_36_HI2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

117. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_019046 (Escherichia coli plasmid pNMEC31_31, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

118. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP047460 (Escherichia coli strain ZF31 plasmid pZF31-tetX-119kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

119. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP047466 (Escherichia coli strain ZF34 plasmid pZF34-tetX-114kb, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

120. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP035315 (Escherichia coli strain D72 plasmid pD72-IncX1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

121. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050748 (Salmonella enterica subsp. enterica serovar Typhimurium strain ST53 plasmid pST53-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

122. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_024961 (Escherichia coli plasmid pIS15_43, strain ISI5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

123. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_021842 (Salmonella enterica subsp. enterica serovar Heidelberg str. CFSAN002069 plasmid pCFSAN002069_02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

124. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_LT985261 (Escherichia coli strain 657 plasmid RCS50_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

125. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_AP019678 (Escherichia coli strain GSH8M-2 plasmid pGSH8M-2-3, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

126. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP009074 (Escherichia coli ATCC 25922 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

127. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP010168 (Escherichia coli strain H3 plasmid A, complete genome) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

128. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_010378 (Escherichia coli plasmid pOLA52, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

129. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to CP016512 (Salmonella enterica subsp. enterica serovar Heidelberg strain SH14-028 plasmid pSH14-028_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

130. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP016529 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_42, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

131. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP016518 (Salmonella enterica subsp. enterica serovar Heidelberg strain CE-R2-11-0435 plasmid pCE-R2-11-0435_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

132. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032988 (Escherichia coli strain BE2-5 plasmid p2_BE2-5, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

133. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP017633 (Escherichia coli strain SLK172 plasmid pSLK172-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

134. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP012922 (Salmonella enterica subsp. enterica serovar Heidelberg strain SA02DT10168701 plasmid pSA02DT10168701_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

135. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033093 (Escherichia coli strain CP53 plasmid pCP53-38k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

136. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP012926 (Salmonella enterica subsp. enterica serovar Heidelberg strain 12-4374 plasmid p12-4374_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

137. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP023360 (Escherichia coli strain 1943 plasmid p54, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

138. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to CP043734 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

139. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP039600 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014867 plasmid p12-6334.1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

140. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP030283 (Escherichia coli strain E308 plasmid pLKSZ02, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

141. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_011204 (Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 plasmid pCT02021853_74, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

142. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_017624 (Salmonella enterica subsp. enterica serovar Heidelberg str. B182 plasmid pB182_37, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

143. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050710 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE109 plasmid pSE109-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

144. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP024290 (Escherichia coli O178:H19 strain 2012C-4431 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

145. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP048777 (Salmonella enterica subsp. enterica serovar Agona strain SG17-135 plasmid pSG17-135-X, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

146. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041631 (Escherichia coli strain PE15 plasmid pPE15-27K, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

147. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050773 (Salmonella enterica subsp. enterica serovar Indiana strain SI102 plasmid pSI102-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

148. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP041444 (Escherichia coli strain YPE10 plasmid pYPE10-78k, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

149. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP019180 (Salmonella enterica subsp. enterica serovar Dublin str. ATCC 39184 plasmid pATCC39184, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

150. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050765 (Salmonella enterica subsp. enterica serovar Indiana strain SI111 plasmid pSI111-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

151. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_010422 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1115, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

152. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050759 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

153. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_AP022652 (Escherichia coli strain 09-02E plasmid p2-09-02E, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

154. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP024136 (Escherichia coli strain 14EC017 plasmid p14EC017b, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

155. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

156. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MN436006 (Escherichia coli strain JS1-EC05 plasmid pEC05-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

157. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MN436007 (Escherichia coli strain JS3-EC12 plasmid pEC12-X4, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

158. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

159. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP045839 (Citrobacter sp. H12-3-2 plasmid pH12-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

160. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP032381 (Salmonella enterica subsp. enterica serovar Dublin strain USMARC-69807 plasmid pSDU2-USMARC-69807, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

161. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG825381 (Escherichia coli strain 1108 plasmid p1108-NDM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

162. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT197111 (Escherichia coli strain RB3-1 plasmid pRB3-1_31K_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

163. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219817 (Escherichia coli strain RF148-2 plasmid pRF148-2_101k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

164. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219819 (Escherichia coli strain RF52-1 plasmid pRF52-1_119k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

165. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to MT219821 (Escherichia coli strain RF45-1 plasmid pRF45-1_31k_tetX, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

166. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MG288677 (Klebsiella pneumoniae strain F160070 plasmid p160070-CTXM, complete sequence) position: , mismatch: 0, identity: 1.0

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaattacag	Protospacer
**********************************

167. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP030195 (Salmonella enterica strain SA20080453 plasmid pSA20080453.1, complete sequence) position: , mismatch: 1, identity: 0.971

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgcagccatccacctttcatgaaaatcacag	Protospacer
*****************************.****

168. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP033353 (Salmonella enterica subsp. enterica strain CFSA664 plasmid pCFSA664-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

169. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP050780 (Salmonella enterica subsp. enterica serovar Indiana strain SI85 plasmid pSI85-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gcccgcagccatccacctttcatgaaaattacag	Protospacer
*. *******************************

170. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP022061 (Salmonella enterica strain FDAARGOS_312 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

171. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to CP048927 (Salmonella enterica subsp. enterica serovar Saintpaul strain NY-N14748 plasmid pN14748, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

172. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP029841 (Salmonella enterica subsp. enterica serovar Typhimurium strain 01ST04081 plasmid p01ST04081A, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

173. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP028313 (Salmonella enterica subsp. enterica serovar Heidelberg strain CFSAN067218 plasmid pSH-04-2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

174. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP018662 (Salmonella enterica subsp. enterica serovar Enteritidis strain 95-0621 plasmid pSE95-0621-1, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

175. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to CP049987 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N16S133 plasmid pN16S133, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

176. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to CP049982 (Salmonella enterica subsp. enterica serovar Saintpaul strain CVM N52030 plasmid pN52030, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

177. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NC_010421 (Salmonella enterica subsp. enterica serovar Dublin plasmid pOU1114, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

178. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_MK625201 (Salmonella enterica subsp. enterica serovar Pullorum strain S9804 plasmid pSPUR, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

179. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP023476 (Salmonella enterica subsp. enterica serovar Enteritidis strain FORC_075 plasmid pFORC75_2, complete sequence) position: , mismatch: 2, identity: 0.941

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
gtgcgtacccatccacctttcatgaaaattacag	Protospacer
*****.* **************************

180. spacer 1.1|53619|34|NZ_CP047573|CRISPRCasFinder matches to NZ_CP044292 (Escherichia coli strain P43A plasmid pP43A-1, complete sequence) position: , mismatch: 4, identity: 0.882

gtgcgcagccatccacctttcatgaaaattacag	CRISPR spacer
tcgaacagccatccacctttcatgaaaattacag	Protospacer
 .* .*****************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1768 : 53451

Escherichia_phage(38.89%)

transposase,integrase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948429.1\|1768_2968_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000957857.1\|2977_3166_-	hypothetical protein	NA	NA	NA	NA
WP_032409716.1\|3395_3500_+	hypothetical protein	NA	NA	NA	NA
WP_000764642.1\|3628_3886_+	hypothetical protein	NA	NA	NA	NA
WP_160177684.1\|3943_4720_-\|integrase	tyrosine-type recombinase/integrase	I3WFA4	Macacine_betaherpesvirus	6.4e-53	92.9
WP_020956882.1\|4731_5418_-	hypothetical protein	NA	NA	NA	NA
WP_020956883.1\|5481_5775_-	hypothetical protein	NA	NA	NA	NA
WP_074193041.1\|5933_6395_-	hypothetical protein	NA	NA	NA	NA
WP_001261282.1\|6351_6582_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_001044770.1\|6578_6995_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_004206609.1\|7068_8631_+	AAA family ATPase	NA	NA	NA	NA
WP_000361404.1\|8615_9638_+	helicase UvrD	NA	NA	NA	NA
WP_031592169.1\|10175_11090_+	HNH endonuclease	NA	NA	NA	NA
WP_004187110.1\|11275_11626_-	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	6.0e-19	51.4
WP_004187113.1\|11773_12205_-	silver-binding protein SilE	NA	NA	NA	NA
WP_003032875.1\|12455_13931_-	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_065801211.1\|13923_14604_-	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.7e-31	35.6
WP_000475512.1\|14793_16179_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001246153.1\|16207_16561_+	cation efflux system protein CusF	NA	NA	NA	NA
WP_032413333.1\|16674_17967_+	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_020219104.1\|17977_21124_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	2.1e-62	22.4
WP_000758229.1\|21210_21651_+	hypothetical protein	NA	NA	NA	NA
WP_001398208.1\|21748_24226_+	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	2.9e-83	35.4
WP_000843497.1\|24266_24464_+	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_001067858.1\|24614_25319_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067858.1\|27216_27921_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_072042932.1\|28344_28578_+	hypothetical protein	NA	NA	NA	NA
WP_001456218.1\|28778_29621_+	alpha/beta fold putative hydrolase EstX	NA	NA	NA	NA
WP_001206316.1\|29709_30501_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000800531.1\|30670_31003_+	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_109023896.1\|31904_32180_+	hypothetical protein	NA	NA	NA	NA
WP_000034420.1\|32182_32974_-	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_001354008.1\|33442_33688_-	GrpB family protein	NA	NA	NA	NA
WP_000612791.1\|33725_34589_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_011264039.1\|34734_34974_-	macrolide transporter	A0A2K5B2B5	Erysipelothrix_phage	9.5e-08	46.2
WP_001067858.1\|35046_35751_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_110918390.1\|35809_36418_+	MobA/MobL family protein	NA	NA	NA	NA
WP_038988887.1\|36430_37291_+	hypothetical protein	NA	NA	NA	NA
WP_160177685.1\|37369_37519_+	hypothetical protein	NA	NA	NA	NA
WP_038988888.1\|37515_37863_+	hypothetical protein	NA	NA	NA	NA
WP_038988891.1\|38257_38704_-	DMT family transporter	NA	NA	NA	NA
WP_001067858.1\|39670_40375_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067858.1\|40627_41332_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001235713.1\|41708_42266_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	7.0e-94	100.0
WP_000027057.1\|42448_43309_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_174235733.1\|44075_44777_+	RepA protein	NA	NA	NA	NA
WP_011977766.1\|45723_46059_-	C2H2-type zinc finger protein	NA	NA	NA	NA
WP_001568067.1\|46231_46513_+	hypothetical protein	NA	NA	NA	NA
WP_000176305.1\|46566_47178_+	DUF2913 family protein	NA	NA	NA	NA
WP_001326844.1\|47174_47336_-	hypothetical protein	NA	NA	NA	NA
WP_001145103.1\|47362_48355_-	hypothetical protein	NA	NA	NA	NA
WP_000075580.1\|48403_48559_-	hypothetical protein	NA	NA	NA	NA
WP_001067858.1\|48699_49404_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_000844102.1\|49465_49663_-	hypothetical protein	NA	NA	NA	NA
WP_001694850.1\|49667_50309_-	restriction endonuclease	NA	NA	NA	NA
WP_001067858.1\|52746_53451_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_2

103788 : 112273

Macacine_betaherpesvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001232861.1\|103788_104316_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.7e-21	39.5
WP_001776120.1\|104347_104779_-	hypothetical protein	NA	NA	NA	NA
WP_160177691.1\|104910_105084_-	hypothetical protein	NA	NA	NA	NA
WP_023281075.1\|105255_106221_-	DUF1738 domain-containing protein	A0A1V0EEV1	Caulobacter_phage	1.3e-58	42.7
WP_001776124.1\|106672_107098_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.9e-31	50.4
WP_000457544.1\|107097_108369_+	Y-family DNA polymerase	F1C5A5	Cronobacter_phage	5.6e-155	63.7
WP_000181753.1\|108447_108699_+	hypothetical protein	NA	NA	NA	NA
WP_000534920.1\|108752_109058_+	hypothetical protein	NA	NA	NA	NA
WP_160177692.1\|110135_111107_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	2.3e-156	89.4
WP_000523812.1\|111106_112273_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	3.0e-224	97.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP047571

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047571_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_1

954438-955259

Orphan

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACC	PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

13 spacers

The CRISPR arrays of NZ_CP047571_1

>merge|NZ_CP047571|1|954438-955259|PILER-CR,CRISPRCasFinder,CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGGGAGGAATTCCGTGCAGTAATGGAGAACGGTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCTGGTGATGCCGGAAAAATTCATCCTTTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGTTGACCGTGTACGCAAACAGGCTGAATATGTGTTCCCCGCGCCAGCGGGGATAAACCGCTCGATCAGGAAAATGAATTCCTGGAAAAAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGACAATCAGGGAACGATTGTTGACACTGTAAAAGTGTTCCCCACGCCAGCGGGGATAAACCGTTCGTTTTTCGCAGCATTAACTTTTTGCCGCGGTGTTCCCCGCGCCAGCGGGGATAAACCGTATTCGTAGGGTTTGCGCCGGAAATAGGCGCTGTGTTCCCCGCGCCAGCGGGGATAAACCTTGATCCGCGACCGCCAGATGGCGCGGCCTGTCGTGTTCCCCGCGCCAGCGGGGATAAACCGGTGCGCCAGCTATAAAAAACTCACCATCAACAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTATAGCAGCACTCCACCAGCTCGAGCAGCAGGTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAAAAATAATATCCGGCAGTCTGTACGGTAGTGTTCCCCGCGCCAGCGGGGATAAACCGTGGCAGGCCGGTAATATGAAAACGACAGAGCAGTGTTCCCCGCGCCAGCGGGGATAAACCGACGTGGTCATGGGTGCTGCTGTTGCAGAGCCAGTGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP047571|1|1|954438-955258|PILER-CR
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCGGGGAGGAATTCCGTGCAGTAATGGAGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCCCCTGGTGATGCCGGAAAAATTCATCCTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGCGTTGACCGTGTACGCAAACAGGCTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTCGATCAGGAAAATGAATTCCTGGAAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCACGCCAGCGGGGATAAACC	GTTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACC	TTGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACC	GGTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACC	GCAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GTGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACC	GACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACC

>NZ_CP047571|1|1|954438-955259|CRISPRCasFinder
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGGAGGAATTCCGTGCAGTAATGGAGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCTGGTGATGCCGGAAAAATTCATCCTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTGACCGTGTACGCAAACAGGCTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGATCAGGAAAATGAATTCCTGGAAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCACGCCAGCGGGGATAAACCG	TTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP047571|1|1|954438-955259|CRT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CGGGGAGGAATTCCGTGCAGTAATGGAGAACG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CCCCTGGTGATGCCGGAAAAATTCATCCTTTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGTTGACCGTGTACGCAAACAGGCTGAATAT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTCGATCAGGAAAATGAATTCCTGGAAAAAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACAATCAGGGAACGATTGTTGACACTGTAAAA
GTGTTCCCCACGCCAGCGGGGATAAACCG	TTCGTTTTTCGCAGCATTAACTTTTTGCCGCG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TATTCGTAGGGTTTGCGCCGGAAATAGGCGCT
GTGTTCCCCGCGCCAGCGGGGATAAACCT	TGATCCGCGACCGCCAGATGGCGCGGCCTGTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GTGCGCCAGCTATAAAAAACTCACCATCAACA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTATAGCAGCACTCCACCAGCTCGAGCAGCAG
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CAAAAAAATAATATCCGGCAGTCTGTACGGTA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGGCAGGCCGGTAATATGAAAACGACAGAGCA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ACGTGGTCATGGGTGCTGCTGTTGCAGAGCCA
GTGTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_001268460.1\|952261_953134_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP047571.1\|WP_001164567.1\|957402_958680_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP047571.1\|WP_000109526.1\|965869_966130_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP047571.1\|WP_174235727.1\|962106_963516_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP047571.1\|WP_000389120.1\|966120_967392_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP047571.1\|WP_001299097.1\|964269_965130_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP047571.1\|WP_001199973.1\|953426_954098_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP047571.1\|WP_001071648.1\|948159_948951_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP047571.1\|WP_001299652.1\|963493_964273_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP047571.1\|WP_000046812.1\|943844_945146_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP047571.1\|WP_137433974.1\|960630_962085_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP047571.1\|WP_000036723.1\|950903_952202_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP047571.1\|WP_000581937.1\|947505_947754_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP047571.1\|WP_001130266.1\|965277_965853_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP047571.1\|WP_160177348.1\|955897_957376_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP047571.1\|WP_001288228.1\|953147_953288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047571.1\|WP_000210878.1\|949178_950816_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP047571.1\|WP_000021321.1\|959775_960561_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP047571.1\|WP_000254738.1\|947753_948089_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP047571.1\|WP_000226815.1\|945193_947428_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_001268460.1\|952261_953134_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
NZ_CP047571.1\|WP_001164567.1\|957402_958680_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	3.44047e-29
NZ_CP047571.1\|WP_000109526.1\|965869_966130_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP047571.1\|WP_174235727.1\|962106_963516_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.58671e-51
NZ_CP047571.1\|WP_000389120.1\|966120_967392_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	1.53966e-127
NZ_CP047571.1\|WP_001299097.1\|964269_965130_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP047571.1\|WP_001199973.1\|953426_954098_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP047571.1\|WP_001071648.1\|948159_948951_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP047571.1\|WP_001299652.1\|963493_964273_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP047571.1\|WP_000046812.1\|943844_945146_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP047571.1\|WP_137433974.1\|960630_962085_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.10816e-82
NZ_CP047571.1\|WP_000036723.1\|950903_952202_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP047571.1\|WP_000581937.1\|947505_947754_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP047571.1\|WP_160177348.1\|955897_957376_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	4.18161e-108
NZ_CP047571.1\|WP_001130266.1\|965277_965853_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP047571.1\|WP_000210878.1\|949178_950816_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP047571.1\|WP_000021321.1\|959775_960561_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.84461e-140
NZ_CP047571.1\|WP_000254738.1\|947753_948089_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP047571.1\|WP_000226815.1\|945193_947428_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0

>NZ_CP047571.1|WP_001199973.1|953426_954098_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP047571.1|WP_001288228.1|953147_953288_-|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP047571.1|WP_001268460.1|952261_953134_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP047571.1|WP_000036723.1|950903_952202_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP047571.1|WP_000210878.1|949178_950816_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP047571.1|WP_001071648.1|948159_948951_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP047571.1|WP_000254738.1|947753_948089_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP047571.1|WP_000581937.1|947505_947754_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP047571.1|WP_000226815.1|945193_947428_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP047571.1|WP_000046812.1|943844_945146_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP047571.1|WP_160177348.1|955897_957376_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMEKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPETLLYEGYGIRKGMWTVSWLRDMLGESLIQDAKAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKYVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFMPVESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNADSIQSWSNA
>NZ_CP047571.1|WP_001164567.1|957402_958680_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQVAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSASLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLALTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALAMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP047571.1|WP_000021321.1|959775_960561_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP047571.1|WP_137433974.1|960630_962085_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVIKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP047571.1|WP_174235727.1|962106_963516_+|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTANLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP047571.1|WP_001299652.1|963493_964273_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP047571.1|WP_001299097.1|964269_965130_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP047571.1|WP_001130266.1|965277_965853_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP047571.1|WP_000109526.1|965869_966130_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP047571.1|WP_000389120.1|966120_967392_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGATTFSSLQPGGESWSVLRARFDPWLVAEAEEEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLEPSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFALYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

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Crispr_ID: NZ_CP047571_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_2

982084-983149

TypeI-E

I-E

Consensus_repeat	Method
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT
GTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR

17 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

The CRISPR arrays of NZ_CP047571_2

>merge|NZ_CP047571|2|982084-983149|CRISPRCasFinder,CRT,PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCGCGCTATCAGCCCAATTCATTAACCCATCACTAGAGTTCCCCGCGCCAGCGGGGATAAACCGGCAATGATGGACAGCGCGGAGATCGGGGAGGTGAGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCCACTAACAGAAGTATGTGCTGGTTCAGGAGTTCCCCGCGCCAGCGGGGATAAACCGTAAGGTAAACGCTATGAATTATCCGGCAGTTGGAGTTCCCCGCGCCAGCGGGGATAAACCGAAATGCAAACAGCAAGCTCAGGAGAATTTACTGAGTTCCCCGCGCCAGCGGGGATAAACCGCGATCGGCAACAGCATGGAGGTGCCGGTAATGGAGTTCCCCGCGCCAGCGGGGATAAACCGTACTAAAAGTCTGGTTCACGAATATCAAAAGGGAGTTCCCCGCGCCAGCGGGGATAAACCGTAGCTGTTATTAACGAACCTGTGAGAATAGTGGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGGAACGTAAGGGCCAGCGTTTTATCTTCGAGTTCCCCGCGTCAGCGGGGATAAACCGCGAGCGCAACACGGCCATATTATTACCCCATTGAGTTCCCCGCGTCAGCGGGGATAAACCGCTTATAACCGGCGGCAAAAATCGTCGCGTTGGGAGTTCCCCGCGTCAGCGGGGATAAACCGAGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGTGTTCCCCGCGCCAGCGGGGATAAACCGCTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGTGTTCCCCGCGCCAGCGGGGATAAACCGTGTTTTAGAGATGTGTATTCAAAATCAGATAGGAGTTCCCCGCGTCAGCGGGGATAAACCGAAATTGATCCCAGGGTGATTATCGTGGGGATCGTGTTCCCCGCGCCAGCGGGGATAAACCGATTTCTTTAATTATTTAGCTGATGCTTTTAAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGGTAAAAACACGGTCTGAACCGACATTCATGTGTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP047571|2|2|982084-983149|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTATCAGCCCAATTCATTAACCCATCACTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATGATGGACAGCGCGGAGATCGGGGAGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACTAACAGAAGTATGTGCTGGTTCAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGTAAACGCTATGAATTATCCGGCAGTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGCAAACAGCAAGCTCAGGAGAATTTACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCGGCAACAGCATGGAGGTGCCGGTAATG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TACTAAAAGTCTGGTTCACGAATATCAAAAGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAGCTGTTATTAACGAACCTGTGAGAATAGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGGAACGTAAGGGCCAGCGTTTTATCTTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CGAGCGCAACACGGCCATATTATTACCCCATT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CTTATAACCGGCGGCAAAAATCGTCGCGTTGG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP047571|2|2|982084-983149|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCTATCAGCCCAATTCATTAACCCATCACTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GCAATGATGGACAGCGCGGAGATCGGGGAGGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACTAACAGAAGTATGTGCTGGTTCAG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGTAAACGCTATGAATTATCCGGCAGTTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AAATGCAAACAGCAAGCTCAGGAGAATTTACT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGATCGGCAACAGCATGGAGGTGCCGGTAATG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TACTAAAAGTCTGGTTCACGAATATCAAAAGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAGCTGTTATTAACGAACCTGTGAGAATAGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGGAACGTAAGGGCCAGCGTTTTATCTTC
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CGAGCGCAACACGGCCATATTATTACCCCATT
GAGTTCCCCGCGTCAGCGGGGATAAACCG	CTTATAACCGGCGGCAAAAATCGTCGCGTTGG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAG
GAGTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGT
GTGTTCCCCGCGTCAGCGGGGATAAACCG

>NZ_CP047571|2|2|982086-983149|PILER-CR
GTTCCCCGCGCCAGCGGGGATAAACCG	CGCTATCAGCCCAATTCATTAACCCATCACTAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	GCAATGATGGACAGCGCGGAGATCGGGGAGGTGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CGCGCCACTAACAGAAGTATGTGCTGGTTCAGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGTAAACGCTATGAATTATCCGGCAGTTGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	AAATGCAAACAGCAAGCTCAGGAGAATTTACTGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CGATCGGCAACAGCATGGAGGTGCCGGTAATGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	TACTAAAAGTCTGGTTCACGAATATCAAAAGGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	TAGCTGTTATTAACGAACCTGTGAGAATAGTGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CGTCGGAACGTAAGGGCCAGCGTTTTATCTTCGA
GTTCCCCGCGTCAGCGGGGATAAACCG	CGAGCGCAACACGGCCATATTATTACCCCATTGA
GTTCCCCGCGTCAGCGGGGATAAACCG	CTTATAACCGGCGGCAAAAATCGTCGCGTTGGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AGATTGGTTTTCCAGTCTTTGGCGGTTGGCAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	CTGTGCCGGTAGCCCCCTCCCTGTTCAGCCTCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TGTTTTAGAGATGTGTATTCAAAATCAGATAGGA
GTTCCCCGCGTCAGCGGGGATAAACCG	AAATTGATCCCAGGGTGATTATCGTGGGGATCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	ATTTCTTTAATTATTTAGCTGATGCTTTTAAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GGTAAAAACACGGTCTGAACCGACATTCATGTGT
GTTCCCCGCGTCAGCGGGGATAAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000246138.1\|988358_989069_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP047571.1\|WP_000220066.1\|980774_981692_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP047571.1\|WP_001050401.1\|976408_977917_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP047571.1\|WP_000039863.1\|971735_972470_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP047571.1\|WP_000372108.1\|984519_985428_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP047571.1\|WP_001290699.1\|969949_971662_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP047571.1\|WP_001173676.1\|986856_987462_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP047571.1\|WP_001090386.1\|985429_986857_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP047571.1\|WP_000752800.1\|977909_978392_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP047571.1\|WP_001246104.1\|987511_987835_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP047571.1\|WP_000568943.1\|989544_990594_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP047571.1\|WP_000517476.1\|988028_988340_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP047571.1\|WP_000281399.1\|980159_980759_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP047571.1\|WP_137433513.1\|978404_979496_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP047571.1\|WP_000490426.1\|983230_984268_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP047571.1\|WP_001219242.1\|989068_989548_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP047571.1\|WP_085949154.1\|973607_974755_-\|IS3-like-element-ISEc52-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP047571.1\|WP_001295182.1\|990574_991336_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP047571.1\|WP_001381369.1\|981693_981978_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP047571.1\|WP_001258269.1\|979498_980173_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000246138.1\|988358_989069_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP047571.1\|WP_000220066.1\|980774_981692_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.68794e-159
NZ_CP047571.1\|WP_001050401.1\|976408_977917_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP047571.1\|WP_000039863.1\|971735_972470_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	6.7075e-138
NZ_CP047571.1\|WP_000372108.1\|984519_985428_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP047571.1\|WP_001290699.1\|969949_971662_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP047571.1\|WP_001173676.1\|986856_987462_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP047571.1\|WP_001090386.1\|985429_986857_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP047571.1\|WP_000752800.1\|977909_978392_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.76293e-33
NZ_CP047571.1\|WP_001246104.1\|987511_987835_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP047571.1\|WP_000568943.1\|989544_990594_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP047571.1\|WP_000517476.1\|988028_988340_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP047571.1\|WP_000281399.1\|980159_980759_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
NZ_CP047571.1\|WP_137433513.1\|978404_979496_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	2.62622e-153
NZ_CP047571.1\|WP_000490426.1\|983230_984268_-\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP047571.1\|WP_001219242.1\|989068_989548_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP047571.1\|WP_085949154.1\|973607_974755_-\|IS3-like-element-ISEc52-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.90782e-144
NZ_CP047571.1\|WP_001295182.1\|990574_991336_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP047571.1\|WP_001381369.1\|981693_981978_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.76227e-62
NZ_CP047571.1\|WP_001258269.1\|979498_980173_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100

>NZ_CP047571.1|WP_001381369.1|981693_981978_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV
>NZ_CP047571.1|WP_000220066.1|980774_981692_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP047571.1|WP_000281399.1|980159_980759_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP047571.1|WP_001258269.1|979498_980173_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP047571.1|WP_137433513.1|978404_979496_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA
>NZ_CP047571.1|WP_000752800.1|977909_978392_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP047571.1|WP_001050401.1|976408_977917_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP047571.1|WP_085949154.1|973607_974755_-|IS3-like-element-ISEc52-family-transposase
MKKRNFSAEFKRESAQLVVDQNYTVADAASAMDVGLSTMTRWVKQLRDERQGKTPKASPITPEQIEIRELRKKLQRIEMENEIFKKGYRALDVRLPEQFSIIGKLRARYPVATLCHVFGVHRSSYKYWKNRPEKPDGRRAVLRSQVLELHGISHGSAGARSIATMATQRGYQMGRWLAGRLMKELGLVSCQQPTYRYKRGGHEHVAIPNYLERQFAVTEPNQVWCGDVTYIWTGKRWAYLAVVLDLFARKPVGWAMSFSPDSRLTMKALEMAWETRGKPVGVMFHSDQGSHYTSRQFRQLLWRYRIRQSMSRRGNCWDNSPMERFFRSLKNEWVPATGYVSFSDAAHAITDYIVGYYSALRPHEYNGGLPPNESENRYWKKL
>NZ_CP047571.1|WP_000039863.1|971735_972470_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAQLEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMSEEETRFFGLKRECGLHEG
>NZ_CP047571.1|WP_001290699.1|969949_971662_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP047571.1|WP_000490426.1|983230_984268_-|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP047571.1|WP_000372108.1|984519_985428_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP047571.1|WP_001090386.1|985429_986857_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP047571.1|WP_001173676.1|986856_987462_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP047571.1|WP_001246104.1|987511_987835_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP047571.1|WP_000517476.1|988028_988340_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP047571.1|WP_000246138.1|988358_989069_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP047571.1|WP_001219242.1|989068_989548_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP047571.1|WP_000568943.1|989544_990594_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP047571.1|WP_001295182.1|990574_991336_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

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Crispr_ID: NZ_CP047571_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_3

1482298-1482415

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_3

>merge|NZ_CP047571|3|1482298-1482415|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP047571|3|3|1482298-1482415|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000786548.1\|1502291_1503476_-\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP047571.1\|WP_160177389.1\|1470935_1471739_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP047571.1\|WP_001209902.1\|1474060_1475320_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP047571.1\|WP_000990753.1\|1489295_1490018_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP047571.1\|WP_000948723.1\|1477210_1478569_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP047571.1\|WP_001281254.1\|1490164_1492792_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP047571.1\|WP_160177392.1\|1501441_1502218_+\|DUF2135-domain-containing-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP047571.1\|WP_053882122.1\|1499787_1501437_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP047571.1\|WP_061359899.1\|1469628_1470918_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP047571.1\|WP_000779091.1\|1478573_1479650_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP047571.1\|WP_160177390.1\|1485415_1489168_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP047571.1\|WP_000301049.1\|1480112_1480763_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP047571.1\|WP_160177391.1\|1492940_1494629_+\|DUF2138-family-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP047571.1\|WP_137433654.1\|1495392_1499787_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP047571.1\|WP_001000358.1\|1472873_1474064_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP047571.1\|WP_000135040.1\|1480816_1481071_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP047571.1\|WP_077492556.1\|1494625_1495249_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP047571.1\|WP_000332037.1\|1481070_1482201_-\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP047571.1\|WP_001075164.1\|1482434_1484720_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP047571.1\|WP_061359900.1\|1475309_1476938_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000786548.1\|1502291_1503476_-\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP047571.1\|WP_160177389.1\|1470935_1471739_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NZ_CP047571.1\|WP_001209902.1\|1474060_1475320_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP047571.1\|WP_000990753.1\|1489295_1490018_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
NZ_CP047571.1\|WP_000948723.1\|1477210_1478569_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP047571.1\|WP_001281254.1\|1490164_1492792_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP047571.1\|WP_160177392.1\|1501441_1502218_+\|DUF2135-domain-containing-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.80574e-152
NZ_CP047571.1\|WP_053882122.1\|1499787_1501437_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	6.28901e-127
NZ_CP047571.1\|WP_061359899.1\|1469628_1470918_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.7099e-87
NZ_CP047571.1\|WP_000779091.1\|1478573_1479650_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP047571.1\|WP_160177390.1\|1485415_1489168_+\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP047571.1\|WP_000301049.1\|1480112_1480763_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.43283e-158
NZ_CP047571.1\|WP_160177391.1\|1492940_1494629_+\|DUF2138-family-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP047571.1\|WP_137433654.1\|1495392_1499787_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP047571.1\|WP_001000358.1\|1472873_1474064_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP047571.1\|WP_000135040.1\|1480816_1481071_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP047571.1\|WP_077492556.1\|1494625_1495249_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	3.13004e-140
NZ_CP047571.1\|WP_000332037.1\|1481070_1482201_-\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP047571.1\|WP_001075164.1\|1482434_1484720_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP047571.1\|WP_061359900.1\|1475309_1476938_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0

>NZ_CP047571.1|WP_000332037.1|1481070_1482201_-|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP047571.1|WP_000135040.1|1480816_1481071_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP047571.1|WP_000301049.1|1480112_1480763_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP047571.1|WP_000779091.1|1478573_1479650_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP047571.1|WP_000948723.1|1477210_1478569_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP047571.1|WP_061359900.1|1475309_1476938_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGIIAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP047571.1|WP_001209902.1|1474060_1475320_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP047571.1|WP_001000358.1|1472873_1474064_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVITDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP047571.1|WP_160177389.1|1470935_1471739_+|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAAISGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY
>NZ_CP047571.1|WP_061359899.1|1469628_1470918_+|MFS-transporter
MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQIDTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGSTTLLWGFLSAAMAWADTEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLSGALLEMNGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQLASEEHQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFTASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVALCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFASDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH
>NZ_CP047571.1|WP_001075164.1|1482434_1484720_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP047571.1|WP_160177390.1|1485415_1489168_+|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEDSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTCADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP047571.1|WP_000990753.1|1489295_1490018_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP047571.1|WP_001281254.1|1490164_1492792_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGEGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP047571.1|WP_160177391.1|1492940_1494629_+|DUF2138-family-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLITIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYKHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVHFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP047571.1|WP_077492556.1|1494625_1495249_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVVHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP047571.1|WP_137433654.1|1495392_1499787_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGDELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQPLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP047571.1|WP_053882122.1|1499787_1501437_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTQPTLAEETPLQLALRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYAKVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP047571.1|WP_160177392.1|1501441_1502218_+|DUF2135-domain-containing-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYTAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGAGAIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP047571.1|WP_000786548.1|1502291_1503476_-|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKTLGFDPEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN

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Crispr_ID: NZ_CP047571_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_4

2101386-2101509

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_4

>merge|NZ_CP047571|4|2101386-2101509|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP047571|4|4|2101386-2101509|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_001069977.1\|2097602_2098388_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP047571.1\|WP_160177448.1\|2099215_2100820_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP047571.1\|WP_000212680.1\|2100945_2101251_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP047571.1\|WP_001349911.1\|2096937_2097606_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP047571.1\|WP_000007283.1\|2112064_2112646_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP047571.1\|WP_000701040.1\|2110660_2111830_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP047571.1\|WP_001295403.1\|2090840_2092253_-\|pyruvate-kinase-PykF	unknown	unknown	gnl\|CDD\|181699
NZ_CP047571.1\|WP_000587527.1\|2098391_2099204_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP047571.1\|WP_001182363.1\|2106828_2108040_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP047571.1\|WP_000190982.1\|2109081_2110107_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP047571.1\|WP_000528342.1\|2092809_2093019_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP047571.1\|WP_001301419.1\|2096235_2096874_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP047571.1\|WP_001174943.1\|2103120_2104494_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP047571.1\|WP_001070230.1\|2093473_2094100_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP047571.1\|WP_000102278.1\|2110405_2110495_+\|stress-response-protein-YnhF	unknown	unknown	unknown
NZ_CP047571.1\|WP_000098911.1\|2105389_2106538_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP047571.1\|WP_000493947.1\|2104708_2105350_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP047571.1\|WP_001273527.1\|2094120_2096223_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP047571.1\|WP_000269493.1\|2108152_2109085_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP047571.1\|WP_000534272.1\|2101823_2103080_+\|AIDA-repeat-containing-protein	unknown	unknown	gnl\|CDD\|137602

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_001069977.1\|2097602_2098388_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.09976e-163
NZ_CP047571.1\|WP_160177448.1\|2099215_2100820_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP047571.1\|WP_000212680.1\|2100945_2101251_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	4.48611e-64
NZ_CP047571.1\|WP_001349911.1\|2096937_2097606_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
NZ_CP047571.1\|WP_000007283.1\|2112064_2112646_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP047571.1\|WP_000701040.1\|2110660_2111830_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP047571.1\|WP_001295403.1\|2090840_2092253_-\|pyruvate-kinase-PykF	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP047571.1\|WP_000587527.1\|2098391_2099204_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	7.33089e-174
NZ_CP047571.1\|WP_001182363.1\|2106828_2108040_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP047571.1\|WP_000190982.1\|2109081_2110107_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP047571.1\|WP_000528342.1\|2092809_2093019_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP047571.1\|WP_001301419.1\|2096235_2096874_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	7.60222e-120
NZ_CP047571.1\|WP_001174943.1\|2103120_2104494_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP047571.1\|WP_001070230.1\|2093473_2094100_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP047571.1\|WP_000098911.1\|2105389_2106538_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP047571.1\|WP_000493947.1\|2104708_2105350_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP047571.1\|WP_001273527.1\|2094120_2096223_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0
NZ_CP047571.1\|WP_000269493.1\|2108152_2109085_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP047571.1\|WP_000534272.1\|2101823_2103080_+\|AIDA-repeat-containing-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0

>NZ_CP047571.1|WP_000212680.1|2100945_2101251_-|monooxygenase
MATLLQLHFSFNGPFGDTMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP047571.1|WP_160177448.1|2099215_2100820_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLTNIASIEIPPIYCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYKMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFHGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP047571.1|WP_000587527.1|2098391_2099204_+|hypothetical-protein
MIITQADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGERPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALVYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP047571.1|WP_001069977.1|2097602_2098388_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKIYLYSKAVRLWHWSNALLFVLLLASGLINHFALVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGGNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQTHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP047571.1|WP_001349911.1|2096937_2097606_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP047571.1|WP_001301419.1|2096235_2096874_+|YdhW-family-putative-oxidoreductase-system-protein
MNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP047571.1|WP_001273527.1|2094120_2096223_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIRWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPA
>NZ_CP047571.1|WP_001070230.1|2093473_2094100_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP047571.1|WP_000528342.1|2092809_2093019_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP047571.1|WP_001295403.1|2090840_2092253_-|pyruvate-kinase-PykF
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP047571.1|WP_000534272.1|2101823_2103080_+|AIDA-repeat-containing-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP047571.1|WP_001174943.1|2103120_2104494_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRMPSAIILQRASR
>NZ_CP047571.1|WP_000493947.1|2104708_2105350_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP047571.1|WP_000098911.1|2105389_2106538_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIASARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP047571.1|WP_001182363.1|2106828_2108040_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP047571.1|WP_000269493.1|2108152_2109085_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP047571.1|WP_000190982.1|2109081_2110107_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP047571.1|WP_000102278.1|2110405_2110495_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP047571.1|WP_000701040.1|2110660_2111830_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP047571.1|WP_000007283.1|2112064_2112646_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

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Crispr_ID: NZ_CP047571_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_5

2729548-2729639

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_5

>merge|NZ_CP047571|5|2729548-2729639|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP047571|5|5|2729548-2729639|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_137433877.1\|2735969_2738516_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP047571.1\|WP_160177507.1\|2732480_2733737_-\|YccE-family-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP047571.1\|WP_001543618.1\|2735373_2735973_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326
NZ_CP047571.1\|WP_001307100.1\|2724906_2725599_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP047571.1\|WP_160177505.1\|2718886_2722849_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP047571.1\|WP_001001189.1\|2726814_2727405_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP047571.1\|WP_001301219.1\|2722888_2723527_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP047571.1\|WP_001543616.1\|2738515_2739688_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP047571.1\|WP_000024560.1\|2734916_2735222_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP047571.1\|WP_012304885.1\|2727930_2729259_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP047571.1\|WP_001619304.1\|2726004_2726805_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP047571.1\|WP_001126780.1\|2725610_2725997_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP047571.1\|WP_001028095.1\|2727415_2727910_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP047571.1\|WP_001151437.1\|2730062_2730659_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP047571.1\|WP_001120125.1\|2739817_2740510_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP047571.1\|WP_001543620.1\|2730944_2732186_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP047571.1\|WP_000979516.1\|2718622_2718832_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047571.1\|WP_001143120.1\|2730679_2730907_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP047571.1\|WP_000420617.1\|2733996_2734917_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP047571.1\|WP_001352489.1\|2723815_2724907_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_137433877.1\|2735969_2738516_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP047571.1\|WP_160177507.1\|2732480_2733737_-\|YccE-family-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
NZ_CP047571.1\|WP_001543618.1\|2735373_2735973_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.28652e-82
NZ_CP047571.1\|WP_001307100.1\|2724906_2725599_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	2.45431e-169
NZ_CP047571.1\|WP_160177505.1\|2718886_2722849_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP047571.1\|WP_001001189.1\|2726814_2727405_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.17913e-130
NZ_CP047571.1\|WP_001301219.1\|2722888_2723527_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	3.85643e-153
NZ_CP047571.1\|WP_001543616.1\|2738515_2739688_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP047571.1\|WP_000024560.1\|2734916_2735222_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP047571.1\|WP_012304885.1\|2727930_2729259_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP047571.1\|WP_001619304.1\|2726004_2726805_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	4.69786e-141
NZ_CP047571.1\|WP_001126780.1\|2725610_2725997_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP047571.1\|WP_001028095.1\|2727415_2727910_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP047571.1\|WP_001151437.1\|2730062_2730659_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP047571.1\|WP_001120125.1\|2739817_2740510_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.16516e-137
NZ_CP047571.1\|WP_001543620.1\|2730944_2732186_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP047571.1\|WP_001352489.1\|2723815_2724907_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP047571.1\|WP_000420617.1\|2733996_2734917_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP047571.1\|WP_001143120.1\|2730679_2730907_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44

>NZ_CP047571.1|WP_012304885.1|2727930_2729259_+|pyrimidine-utilization-transport-protein-G
MAMFGLPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP
>NZ_CP047571.1|WP_001028095.1|2727415_2727910_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP047571.1|WP_001001189.1|2726814_2727405_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIIACRALGLDTGPMSGFDRQHVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP047571.1|WP_001619304.1|2726004_2726805_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQVLVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP047571.1|WP_001126780.1|2725610_2725997_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP047571.1|WP_001307100.1|2724906_2725599_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFAHIA
>NZ_CP047571.1|WP_001352489.1|2723815_2724907_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAVRMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPALTQEVA
>NZ_CP047571.1|WP_001301219.1|2722888_2723527_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRVVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP047571.1|WP_160177505.1|2718886_2722849_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSNTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVTAGEMSPVINPAEPKDIVGYVREATPREVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKVNIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP047571.1|WP_000979516.1|2718622_2718832_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP047571.1|WP_001151437.1|2730062_2730659_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP047571.1|WP_001143120.1|2730679_2730907_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP047571.1|WP_001543620.1|2730944_2732186_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAATVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPDTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTRAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP047571.1|WP_160177507.1|2732480_2733737_-|YccE-family-protein
MSSNIHGISCTANNYLKQAWNDIKNEHEKNQKYSITLFENTLVCFMRLYKEIRRQKAEDYIPCLECDSLEKEFEEIQNDNDLSLFLRTLRTNDTETYSGVSEGITYTIQYVRDIDIVRVSLPGRGSESITDFKGYYWYNFMEYIENINACDDVFSEYCLDDENISLQPEWINTPGISNLDSGIDLSGISFIQSEINKTYGLKYAPVDGDGYCLLRAILVFKEHEYSWALGSHKTQKQVYEEFIKIVDKQTIEALVDTAFNDLREDVKTLFGVELQSDNKIQGEGSFLSWSFLSFKKEFIDSCLNDKKCILHLPEFIFNDNKAHLVLDSAPEKRINEVKNFLTALSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLINTGNHYDVYLPPELFAQAYKLRNKEMNAQLDYLNRYAI
>NZ_CP047571.1|WP_000420617.1|2733996_2734917_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP047571.1|WP_000024560.1|2734916_2735222_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP047571.1|WP_001543618.1|2735373_2735973_-|molecular-chaperone-TorD
MTTLTAQQIACIYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLTAAVDELENRVATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALRQWLPEFVARCHQYDSFGFYAALSQLLLVLVEGDHQNR
>NZ_CP047571.1|WP_137433877.1|2735969_2738516_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATEAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVGWLRKRHLSDTSQRSDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYEQLKAKVAAGEIEVISIDPVVTSTHEYLGRGHVKHIAVNPQTDVPLQLALAYTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGWRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDHYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP047571.1|WP_001543616.1|2738515_2739688_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTQFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP047571.1|WP_001120125.1|2739817_2740510_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC

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Crispr_ID: NZ_CP047571_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_6

2873316-2873521

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP047571_6

>merge|NZ_CP047571|6|2873316-2873521|CRISPRCasFinder,CRT,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>NZ_CP047571|6|6|2873316-2873520|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP047571|6|3|2873316-2873520|CRT
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP047571|6|3|2873372-2873521|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000491142.1\|2884414_2885314_+\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP047571.1\|WP_000458809.1\|2885457_2887110_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP047571.1\|WP_000537418.1\|2867105_2868071_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP047571.1\|WP_000067755.1\|2859778_2861122_-\|replication-associated-recombination-protein-RarA	unknown	unknown	gnl\|CDD\|237355
NZ_CP047571.1\|WP_001298299.1\|2883224_2883920_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP047571.1\|WP_000746460.1\|2878921_2880037_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP047571.1\|WP_000520781.1\|2876038_2876359_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP047571.1\|WP_000599802.1\|2881140_2882799_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP047571.1\|WP_160177519.1\|2868193_2869960_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP047571.1\|WP_000886683.1\|2858395_2859688_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP047571.1\|WP_000410785.1\|2876681_2876906_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP047571.1\|WP_001295343.1\|2861132_2861744_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638
NZ_CP047571.1\|WP_000228473.1\|2866065_2866560_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP047571.1\|WP_160177521.1\|2869960_2871682_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP047571.1\|WP_137433668.1\|2861902_2865931_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP047571.1\|WP_001380339.1\|2880187_2881144_+\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP047571.1\|WP_000934040.1\|2873731_2876008_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP047571.1\|WP_001241678.1\|2871723_2872428_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP047571.1\|WP_001040187.1\|2872712_2872931_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP047571.1\|WP_000188140.1\|2876978_2878925_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000491142.1\|2884414_2885314_+\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	8.74036e-118
NZ_CP047571.1\|WP_000458809.1\|2885457_2887110_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP047571.1\|WP_000537418.1\|2867105_2868071_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP047571.1\|WP_000067755.1\|2859778_2861122_-\|replication-associated-recombination-protein-RarA	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP047571.1\|WP_001298299.1\|2883224_2883920_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.04944e-144
NZ_CP047571.1\|WP_000746460.1\|2878921_2880037_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP047571.1\|WP_000520781.1\|2876038_2876359_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP047571.1\|WP_000599802.1\|2881140_2882799_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP047571.1\|WP_160177519.1\|2868193_2869960_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP047571.1\|WP_000886683.1\|2858395_2859688_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP047571.1\|WP_000410785.1\|2876681_2876906_+\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP047571.1\|WP_001295343.1\|2861132_2861744_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125
NZ_CP047571.1\|WP_000228473.1\|2866065_2866560_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP047571.1\|WP_160177521.1\|2869960_2871682_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP047571.1\|WP_137433668.1\|2861902_2865931_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP047571.1\|WP_001380339.1\|2880187_2881144_+\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	9.34941e-132
NZ_CP047571.1\|WP_000934040.1\|2873731_2876008_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP047571.1\|WP_001241678.1\|2871723_2872428_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
NZ_CP047571.1\|WP_001040187.1\|2872712_2872931_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP047571.1\|WP_000188140.1\|2876978_2878925_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0

>NZ_CP047571.1|WP_001040187.1|2872712_2872931_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP047571.1|WP_001241678.1|2871723_2872428_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>NZ_CP047571.1|WP_160177521.1|2869960_2871682_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLMLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP047571.1|WP_160177519.1|2868193_2869960_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDDRIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP047571.1|WP_000537418.1|2867105_2868071_+|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP047571.1|WP_000228473.1|2866065_2866560_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP047571.1|WP_137433668.1|2861902_2865931_-|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP047571.1|WP_001295343.1|2861132_2861744_-|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP047571.1|WP_000067755.1|2859778_2861122_-|replication-associated-recombination-protein-RarA
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP047571.1|WP_000886683.1|2858395_2859688_-|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP047571.1|WP_000934040.1|2873731_2876008_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKAKNELTYGFQSAQKHKAEAAH
>NZ_CP047571.1|WP_000520781.1|2876038_2876359_-|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP047571.1|WP_000410785.1|2876681_2876906_+|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP047571.1|WP_000188140.1|2876978_2878925_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP047571.1|WP_000746460.1|2878921_2880037_-|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP047571.1|WP_001380339.1|2880187_2881144_+|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>NZ_CP047571.1|WP_000599802.1|2881140_2882799_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP047571.1|WP_001298299.1|2883224_2883920_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD
>NZ_CP047571.1|WP_000491142.1|2884414_2885314_+|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP047571.1|WP_000458809.1|2885457_2887110_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

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Crispr_ID: NZ_CP047571_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_7

3274418-3274514

Orphan

Consensus_repeat	Method
TTGTAGGCCTGATAAGATGCGTCAAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_7

>merge|NZ_CP047571|7|3274418-3274514|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGCATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGGTTGTAGGCCTGATAAGACGCGTCAAGC

>NZ_CP047571|7|7|3274418-3274514|CRISPRCasFinder
TTGTAGGCCTGATAAGATGCGTCAAGC	ATCGCATCAGGCATTGTGCACCAATTGCCGGATGCGGCACCGG
TTGTAGGCCTGATAAGACGCGTCAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000912345.1\|3269883_3271269_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP047571.1\|WP_000006890.1\|3285371_3286733_-\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193
NZ_CP047571.1\|WP_050867478.1\|3271939_3272662_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP047571.1\|WP_000729160.1\|3268138_3269005_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP047571.1\|WP_160177582.1\|3279516_3280566_+\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP047571.1\|WP_137433578.1\|3282846_3283992_-\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_CP047571.1\|WP_000190288.1\|3269006_3269219_+\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP047571.1\|WP_160177576.1\|3275437_3276253_-\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP047571.1\|WP_000540963.1\|3281833_3282619_+\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|225796
NZ_CP047571.1\|WP_001295318.1\|3272779_3273289_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP047571.1\|WP_001143558.1\|3269326_3269848_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP047571.1\|WP_000256002.1\|3271442_3271937_+\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP047571.1\|WP_001255228.1\|3263812_3264328_-\|fimbria-assembly-protein	unknown	unknown	gnl\|CDD\|182153
NZ_CP047571.1\|WP_001350487.1\|3264338_3265379_-\|type-1-fimbrin-D-mannose-specific-adhesin-FimH	unknown	unknown	gnl\|CDD\|237921
NZ_CP047571.1\|WP_001302767.1\|3284013_3285315_-\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP047571.1\|WP_160177580.1\|3277532_3279200_-\|acyl-CoA-synthetase-FdrA	unknown	unknown	gnl\|CDD\|180395
NZ_CP047571.1\|WP_000855388.1\|3274547_3275441_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP047571.1\|WP_137433579.1\|3280587_3281823_+\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP047571.1\|WP_000815566.1\|3273285_3274353_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP047571.1\|WP_160177578.1\|3276263_3277523_-\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000912345.1\|3269883_3271269_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP047571.1\|WP_000006890.1\|3285371_3286733_-\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0
NZ_CP047571.1\|WP_050867478.1\|3271939_3272662_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.91417e-166
NZ_CP047571.1\|WP_000729160.1\|3268138_3269005_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP047571.1\|WP_160177582.1\|3279516_3280566_+\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP047571.1\|WP_137433578.1\|3282846_3283992_-\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_CP047571.1\|WP_000190288.1\|3269006_3269219_+\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP047571.1\|WP_160177576.1\|3275437_3276253_-\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	2.69185e-35
NZ_CP047571.1\|WP_000540963.1\|3281833_3282619_+\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|225796	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only].	1.85972e-151
NZ_CP047571.1\|WP_001295318.1\|3272779_3273289_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP047571.1\|WP_001143558.1\|3269326_3269848_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.17059e-30
NZ_CP047571.1\|WP_000256002.1\|3271442_3271937_+\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	2.40187e-121
NZ_CP047571.1\|WP_001255228.1\|3263812_3264328_-\|fimbria-assembly-protein	gnl\|CDD\|182153	PRK09934, PRK09934, fimbriae assembly protein.	2.42569e-108
NZ_CP047571.1\|WP_001350487.1\|3264338_3265379_-\|type-1-fimbrin-D-mannose-specific-adhesin-FimH	gnl\|CDD\|237921	PRK15199, fimH, type 1 fimbrin D-mannose specific adhesin FimH.	0
NZ_CP047571.1\|WP_001302767.1\|3284013_3285315_-\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP047571.1\|WP_160177580.1\|3277532_3279200_-\|acyl-CoA-synthetase-FdrA	gnl\|CDD\|180395	PRK06091, PRK06091, membrane protein FdrA; Validated.	0
NZ_CP047571.1\|WP_000855388.1\|3274547_3275441_-\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP047571.1\|WP_137433579.1\|3280587_3281823_+\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP047571.1\|WP_000815566.1\|3273285_3274353_+\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	5.70382e-179
NZ_CP047571.1\|WP_160177578.1\|3276263_3277523_-\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	3.46983e-131

>NZ_CP047571.1|WP_000815566.1|3273285_3274353_+|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRADETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP047571.1|WP_001295318.1|3272779_3273289_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP047571.1|WP_050867478.1|3271939_3272662_+|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCAEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP047571.1|WP_000256002.1|3271442_3271937_+|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP047571.1|WP_000912345.1|3269883_3271269_-|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP047571.1|WP_001143558.1|3269326_3269848_+|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFNFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTAYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP047571.1|WP_000190288.1|3269006_3269219_+|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP047571.1|WP_000729160.1|3268138_3269005_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP047571.1|WP_001350487.1|3264338_3265379_-|type-1-fimbrin-D-mannose-specific-adhesin-FimH
MHTSWLIKEIINKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
>NZ_CP047571.1|WP_001255228.1|3263812_3264328_-|fimbria-assembly-protein
MRRVLFSCFCGLLWSSSGWAADPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
>NZ_CP047571.1|WP_000855388.1|3274547_3275441_-|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTEDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP047571.1|WP_160177576.1|3275437_3276253_-|DUF2877-domain-containing-protein
MTIIHPLLASRSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWMLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRQFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTLGADTLLGFWLGQQLLQGKP
>NZ_CP047571.1|WP_160177578.1|3276263_3277523_-|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLVMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP047571.1|WP_160177580.1|3277532_3279200_-|acyl-CoA-synthetase-FdrA
MIHAFIKKGCFQDSVSLMIISRKLSESENVDDVSVMMGTPANKALLDTTGFWHDDFNDATPNDICVTIRSEAADAGIAQAIMQQLEEALKQLAQGSGSSQALTQVRRWDSACQKLPDASLALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKSRAREKGLLVMGPDCGTSMIAGTPLAFANVMPEGNIGVIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKATGKPTVALFLGYTPAVARDENVWFASSLDEAARLACLLSRVTARRNTIAPVSSGFICGLYTGGTLAAEAAGLLAGHLGVEADDTHQHGMMLDADGHQIIDLGDDFYTVGRPHPMIDPTLRNQLITDLGAKPQVRVLLLDVVIGFGATADPAASLVSAWQKACAARSDNQPLYAIATVTGTERDPQCRSQQIATLEDAGIAVVSSLPEATLLAAALIRPLSPATQQHTPSLLENVAVINIGLRSFALELQSASKPVVHYQWSPVAGGNKKLARLLERLQ
>NZ_CP047571.1|WP_160177582.1|3279516_3280566_+|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGLIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGAPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGKDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP047571.1|WP_137433579.1|3280587_3281823_+|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLIGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSIEKAKKMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKDLVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP047571.1|WP_000540963.1|3281833_3282619_+|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYRDDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVITGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGHAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP047571.1|WP_137433578.1|3282846_3283992_-|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLILVAPEKRNPLLASSFGTGELIRHALDNGIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQVLVANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGEINLFNSARNIACAIKIGQGIKN
>NZ_CP047571.1|WP_001302767.1|3284013_3285315_-|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP047571.1|WP_000006890.1|3285371_3286733_-|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKSEGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHICHISSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ

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Crispr_ID: NZ_CP047571_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_8

3407971-3408115

Orphan

Consensus_repeat	Method
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_8

>merge|NZ_CP047571|8|3407971-3408115|CRISPRCasFinder
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATCGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

>NZ_CP047571|8|8|3407971-3408115|CRISPRCasFinder
TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	CGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACC
TTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000941942.1\|3410729_3411014_-\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_CP047571.1\|WP_001325048.1\|3396831_3398205_-\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_CP047571.1\|WP_000149639.1\|3398280_3399600_-\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331
NZ_CP047571.1\|WP_001298537.1\|3409171_3410083_+\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|225521
NZ_CP047571.1\|WP_001295331.1\|3413546_3414356_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP047571.1\|WP_001276403.1\|3411085_3411763_-\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
NZ_CP047571.1\|WP_001266503.1\|3393109_3394180_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP047571.1\|WP_120795376.1\|3410160_3410244_-\|protein-YkiD	unknown	unknown	unknown
NZ_CP047571.1\|WP_001009885.1\|3394272_3394854_+\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207
NZ_CP047571.1\|WP_000158159.1\|3412968_3413427_-\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP047571.1\|WP_001326926.1\|3406709_3407894_+\|MFS-transporter-AraJ	unknown	unknown	gnl\|CDD\|182234
NZ_CP047571.1\|WP_001310597.1\|3394858_3396676_-\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_CP047571.1\|WP_000484048.1\|3414372_3415488_-\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_CP047571.1\|WP_001221318.1\|3402238_3403441_+\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP047571.1\|WP_160177590.1\|3403437_3406584_+\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330
NZ_CP047571.1\|WP_000113933.1\|3401359_3402049_-\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_CP047571.1\|WP_000193393.1\|3412261_3412786_-\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153
NZ_CP047571.1\|WP_000893623.1\|3400006_3401302_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_CP047571.1\|WP_001142439.1\|3412020_3412212_-\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
NZ_CP047571.1\|WP_001219309.1\|3408138_3409047_-\|fructokinase	unknown	unknown	gnl\|CDD\|236565

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000941942.1\|3410729_3411014_-\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
NZ_CP047571.1\|WP_001325048.1\|3396831_3398205_-\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP047571.1\|WP_000149639.1\|3398280_3399600_-\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_CP047571.1\|WP_001298537.1\|3409171_3410083_+\|recombination-associated-protein-RdgC	gnl\|CDD\|225521	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair].	0
NZ_CP047571.1\|WP_001295331.1\|3413546_3414356_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
NZ_CP047571.1\|WP_001276403.1\|3411085_3411763_-\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	2.25423e-119
NZ_CP047571.1\|WP_001266503.1\|3393109_3394180_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP047571.1\|WP_001142439.1\|3412020_3412212_-\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
NZ_CP047571.1\|WP_001009885.1\|3394272_3394854_+\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	3.03368e-136
NZ_CP047571.1\|WP_000158159.1\|3412968_3413427_-\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	2.50663e-80
NZ_CP047571.1\|WP_001326926.1\|3406709_3407894_+\|MFS-transporter-AraJ	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
NZ_CP047571.1\|WP_001310597.1\|3394858_3396676_-\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_CP047571.1\|WP_000484048.1\|3414372_3415488_-\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_CP047571.1\|WP_001221318.1\|3402238_3403441_+\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP047571.1\|WP_160177590.1\|3403437_3406584_+\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_CP047571.1\|WP_000113933.1\|3401359_3402049_-\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
NZ_CP047571.1\|WP_000893623.1\|3400006_3401302_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_CP047571.1\|WP_000193393.1\|3412261_3412786_-\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108
NZ_CP047571.1\|WP_001219309.1\|3408138_3409047_-\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0

>NZ_CP047571.1|WP_001326926.1|3406709_3407894_+|MFS-transporter-AraJ
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>NZ_CP047571.1|WP_160177590.1|3403437_3406584_+|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQVVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>NZ_CP047571.1|WP_001221318.1|3402238_3403441_+|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFATTLHSLAGEHEA
>NZ_CP047571.1|WP_000113933.1|3401359_3402049_-|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>NZ_CP047571.1|WP_000893623.1|3400006_3401302_-|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>NZ_CP047571.1|WP_000149639.1|3398280_3399600_-|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>NZ_CP047571.1|WP_001325048.1|3396831_3398205_-|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEDVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>NZ_CP047571.1|WP_001310597.1|3394858_3396676_-|maltodextrin-glucosidase
MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>NZ_CP047571.1|WP_001009885.1|3394272_3394854_+|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>NZ_CP047571.1|WP_001266503.1|3393109_3394180_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE
>NZ_CP047571.1|WP_001219309.1|3408138_3409047_-|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>NZ_CP047571.1|WP_001298537.1|3409171_3410083_+|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>NZ_CP047571.1|WP_120795376.1|3410160_3410244_-|protein-YkiD
MTQRPWSKLQRKTHNIAALKIIARRSE
>NZ_CP047571.1|WP_000941942.1|3410729_3411014_-|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>NZ_CP047571.1|WP_001276403.1|3411085_3411763_-|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNHLAHVSRRKVERDLQGVVEVLDNQGYDVIILMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEELLTVQAQKWQILQKPPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFNQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>NZ_CP047571.1|WP_001142439.1|3412020_3412212_-|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>NZ_CP047571.1|WP_000193393.1|3412261_3412786_-|shikimate-kinase-AroL
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>NZ_CP047571.1|WP_000158159.1|3412968_3413427_-|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG
>NZ_CP047571.1|WP_001295331.1|3413546_3414356_+|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>NZ_CP047571.1|WP_000484048.1|3414372_3415488_-|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA

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Crispr_ID: NZ_CP047571_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_9

3792147-3792282

Orphan

Consensus_repeat	Method
TGAATCACCAATATTGAAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP047571_9

>merge|NZ_CP047571|9|3792147-3792282|PILER-CR
TTAATCACCAATATTGAAAATGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTCCTCACCAATATTGAAAACACGGCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGGATCACCAATATTGAAAG

>NZ_CP047571|9|4|3792147-3792282|PILER-CR
TTAATCACCAATATTGAAAA	TGTCACACGCAGATAAATCCAACTTTCAATATTGTTAAGTTCC
TCACCAATATTGAAAACACG	GCGTAGCAAAAAGAAATTTTCAATATTGTTTTATGGA
TCACCAATATTGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000349936.1\|3795347_3796565_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP047571.1\|WP_000692204.1\|3791288_3792059_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP047571.1\|WP_000333125.1\|3799890_3800286_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP047571.1\|WP_160177628.1\|3784828_3786691_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	unknown	unknown	gnl\|CDD\|235131
NZ_CP047571.1\|WP_000787111.1\|3792531_3794046_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP047571.1\|WP_000543606.1\|3805390_3806212_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP047571.1\|WP_000122886.1\|3799091_3799682_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP047571.1\|WP_001395601.1\|3796638_3798192_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP047571.1\|WP_000624375.1\|3784157_3784637_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP047571.1\|WP_000004397.1\|3798300_3799086_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP047571.1\|WP_000347117.1\|3794076_3795219_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP047571.1\|WP_001734803.1\|3803786_3804935_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP047571.1\|WP_001126389.1\|3800547_3803769_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP047571.1\|WP_000600735.1\|3786683_3787214_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	unknown	unknown	gnl\|CDD\|234852
NZ_CP047571.1\|WP_001287715.1\|3788995_3790282_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP047571.1\|WP_160177630.1\|3787321_3788653_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340874
NZ_CP047571.1\|WP_000257192.1\|3783237_3784080_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP047571.1\|WP_000610901.1\|3782853_3783231_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP047571.1\|WP_001091499.1\|3790332_3791274_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP047571.1\|WP_000203741.1\|3788711_3788999_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000349936.1\|3795347_3796565_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP047571.1\|WP_000692204.1\|3791288_3792059_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
NZ_CP047571.1\|WP_000333125.1\|3799890_3800286_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
NZ_CP047571.1\|WP_160177628.1\|3784828_3786691_-\|glutathione-regulated-potassium-efflux-system-protein-KefC	gnl\|CDD\|235131	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional.	0
NZ_CP047571.1\|WP_000787111.1\|3792531_3794046_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP047571.1\|WP_000543606.1\|3805390_3806212_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	4.36213e-141
NZ_CP047571.1\|WP_000122886.1\|3799091_3799682_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
NZ_CP047571.1\|WP_001395601.1\|3796638_3798192_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP047571.1\|WP_000624375.1\|3784157_3784637_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.07206e-127
NZ_CP047571.1\|WP_000004397.1\|3798300_3799086_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	4.82171e-178
NZ_CP047571.1\|WP_000347117.1\|3794076_3795219_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP047571.1\|WP_001734803.1\|3803786_3804935_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP047571.1\|WP_001126389.1\|3800547_3803769_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP047571.1\|WP_000600735.1\|3786683_3787214_-\|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF	gnl\|CDD\|234852	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF.	3.05111e-132
NZ_CP047571.1\|WP_001287715.1\|3788995_3790282_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP047571.1\|WP_160177630.1\|3787321_3788653_-\|MFS-transporter	gnl\|CDD\|340874	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily. This family is composed of metazoan synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters including those that transport inorganic phosphate (Pht), aromatic compounds (PcaK and related proteins), proline/betaine (ProP), alpha-ketoglutarate (KgtP), citrate (CitA), shikimate (ShiA), and cis,cis-muconate (MucK), among others. SV2 is a transporter-like protein that serves as the receptor for botulinum neurotoxin A (BoNT/A), one of seven neurotoxins produced by the bacterium Clostridium botulinum. BoNT/A blocks neurotransmitter release by cleaving synaptosome-associated protein of 25 kD (SNAP-25) within presynaptic nerve terminals. Also included in this family is synaptic vesicle 2 (SV2)-related protein (SVOP) and similar proteins. SVOP is a transporter-like nucleotide binding protein that localizes to neurotransmitter-containing vesicles. The SV2-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.48889e-58
NZ_CP047571.1\|WP_000257192.1\|3783237_3784080_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP047571.1\|WP_000610901.1\|3782853_3783231_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	3.63315e-76
NZ_CP047571.1\|WP_001091499.1\|3790332_3791274_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP047571.1\|WP_000203741.1\|3788711_3788999_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69

>NZ_CP047571.1|WP_000692204.1|3791288_3792059_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP047571.1|WP_001091499.1|3790332_3791274_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP047571.1|WP_001287715.1|3788995_3790282_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP047571.1|WP_000203741.1|3788711_3788999_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP047571.1|WP_160177630.1|3787321_3788653_-|MFS-transporter
MQPSRNFDDLKFSSIHRRILLWGSGGPFLDGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIGRFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLFVAAIRTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNTAGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG
>NZ_CP047571.1|WP_000600735.1|3786683_3787214_-|glutathione-regulated-potassium-efflux-system-oxidoreductase-KefF
MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLWAVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQARHYKQRLLEWQEAHHG
>NZ_CP047571.1|WP_160177628.1|3784828_3786691_-|glutathione-regulated-potassium-efflux-system-protein-KefC
MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPWGLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLGLFCMLLGLRWQVAELIGMTLALSSTAIVMQAMNERNLMVTQMGRSAFAVLLFQDIAAIPLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREVFSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLFFIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQGSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREADEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTKARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS
>NZ_CP047571.1|WP_000624375.1|3784157_3784637_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP047571.1|WP_000257192.1|3783237_3784080_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPGSLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWLRRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMPNNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVAEEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGEAAAS
>NZ_CP047571.1|WP_000610901.1|3782853_3783231_+|Co2+/Mg2+-efflux-protein-ApaG
MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
>NZ_CP047571.1|WP_000787111.1|3792531_3794046_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP047571.1|WP_000347117.1|3794076_3795219_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP047571.1|WP_000349936.1|3795347_3796565_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP047571.1|WP_001395601.1|3796638_3798192_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP047571.1|WP_000004397.1|3798300_3799086_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP047571.1|WP_000122886.1|3799091_3799682_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP047571.1|WP_000333125.1|3799890_3800286_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP047571.1|WP_001126389.1|3800547_3803769_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLVGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP047571.1|WP_001734803.1|3803786_3804935_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKCHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP047571.1|WP_000543606.1|3805390_3806212_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLNLHNL

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Crispr_ID: NZ_CP047571_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_10

3799720-3799861

Orphan

Consensus_repeat	Method
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_10

>merge|NZ_CP047571|10|3799720-3799861|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCGGCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

>NZ_CP047571|10|9|3799720-3799861|CRISPRCasFinder
GCTGGAGAGCAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA	TAGCTGTCGGATGCGGCATAAACGCCTTATCCAACCCG
GCTGGAGAGCAACCGTAAGCCGGATAAGATGCGCCAGCATCGCATCCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000349936.1\|3795347_3796565_+\|L-carnitine-CoA-transferase	unknown	unknown	gnl\|CDD\|179589
NZ_CP047571.1\|WP_000692204.1\|3791288_3792059_-\|electron-transfer-flavoprotein-FixA	unknown	unknown	gnl\|CDD\|179569
NZ_CP047571.1\|WP_000333125.1\|3799890_3800286_-\|carnitine-metabolism-transcriptional-regulator-CaiF	unknown	unknown	gnl\|CDD\|183154
NZ_CP047571.1\|WP_160177631.1\|3807358_3808309_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	unknown	unknown	gnl\|CDD\|234893
NZ_CP047571.1\|WP_001239137.1\|3806378_3807293_-\|ribonucleoside-hydrolase-RihC	unknown	unknown	gnl\|CDD\|182713
NZ_CP047571.1\|WP_001395601.1\|3796638_3798192_+\|crotonobetaine/carnitine-CoA-ligase	unknown	unknown	gnl\|CDD\|181195
NZ_CP047571.1\|WP_000543606.1\|3805390_3806212_-\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|223366
NZ_CP047571.1\|WP_160177632.1\|3808310_3808760_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|237908
NZ_CP047571.1\|WP_000122886.1\|3799091_3799682_+\|carnitine-operon-protein-CaiE	unknown	unknown	gnl\|CDD\|184189
NZ_CP047571.1\|WP_000004397.1\|3798300_3799086_+\|crotonobetainyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|179599
NZ_CP047571.1\|WP_000347117.1\|3794076_3795219_+\|crotonobetainyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|179566
NZ_CP047571.1\|WP_001126389.1\|3800547_3803769_-\|carbamoyl-phosphate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|235393
NZ_CP047571.1\|WP_000083369.1\|3808867_3809362_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|234739
NZ_CP047571.1\|WP_001287715.1\|3788995_3790282_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182273
NZ_CP047571.1\|WP_000767329.1\|3812220_3813162_-\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP047571.1\|WP_001734803.1\|3803786_3804935_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP047571.1\|WP_000787111.1\|3792531_3794046_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	unknown	unknown	gnl\|CDD\|179568
NZ_CP047571.1\|WP_001091499.1\|3790332_3791274_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|235120
NZ_CP047571.1\|WP_000203741.1\|3788711_3788999_-\|ferredoxin-like-protein-FixX	unknown	unknown	gnl\|CDD\|185346
NZ_CP047571.1\|WP_001286884.1\|3809361_3812178_-\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000349936.1\|3795347_3796565_+\|L-carnitine-CoA-transferase	gnl\|CDD\|179589	PRK03525, PRK03525, L-carnitine CoA-transferase.	0
NZ_CP047571.1\|WP_000692204.1\|3791288_3792059_-\|electron-transfer-flavoprotein-FixA	gnl\|CDD\|179569	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed.	6.8619e-170
NZ_CP047571.1\|WP_000333125.1\|3799890_3800286_-\|carnitine-metabolism-transcriptional-regulator-CaiF	gnl\|CDD\|183154	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF.	1.42176e-74
NZ_CP047571.1\|WP_160177631.1\|3807358_3808309_-\|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase	gnl\|CDD\|234893	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed.	0
NZ_CP047571.1\|WP_001239137.1\|3806378_3807293_-\|ribonucleoside-hydrolase-RihC	gnl\|CDD\|182713	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional.	0
NZ_CP047571.1\|WP_001395601.1\|3796638_3798192_+\|crotonobetaine/carnitine-CoA-ligase	gnl\|CDD\|181195	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated.	0
NZ_CP047571.1\|WP_000543606.1\|3805390_3806212_-\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	4.36213e-141
NZ_CP047571.1\|WP_160177632.1\|3808310_3808760_-\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|237908	PRK15095, PRK15095, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	3.24003e-105
NZ_CP047571.1\|WP_000122886.1\|3799091_3799682_+\|carnitine-operon-protein-CaiE	gnl\|CDD\|184189	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional.	6.23334e-142
NZ_CP047571.1\|WP_000004397.1\|3798300_3799086_+\|crotonobetainyl-CoA-hydratase	gnl\|CDD\|179599	PRK03580, PRK03580, crotonobetainyl-CoA hydratase.	4.82171e-178
NZ_CP047571.1\|WP_000347117.1\|3794076_3795219_+\|crotonobetainyl-CoA-dehydrogenase	gnl\|CDD\|179566	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated.	0
NZ_CP047571.1\|WP_001126389.1\|3800547_3803769_-\|carbamoyl-phosphate-synthase-large-subunit	gnl\|CDD\|235393	PRK05294, carB, carbamoyl-phosphate synthase large subunit.	0
NZ_CP047571.1\|WP_000083369.1\|3808867_3809362_-\|signal-peptidase-II	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	8.43095e-76
NZ_CP047571.1\|WP_001287715.1\|3788995_3790282_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182273	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional.	0
NZ_CP047571.1\|WP_000767329.1\|3812220_3813162_-\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	1.26241e-173
NZ_CP047571.1\|WP_001734803.1\|3803786_3804935_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP047571.1\|WP_000787111.1\|3792531_3794046_+\|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter	gnl\|CDD\|179568	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter.	0
NZ_CP047571.1\|WP_001091499.1\|3790332_3791274_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|235120	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein.	0
NZ_CP047571.1\|WP_000203741.1\|3788711_3788999_-\|ferredoxin-like-protein-FixX	gnl\|CDD\|185346	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional.	1.84173e-69
NZ_CP047571.1\|WP_001286884.1\|3809361_3812178_-\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0

>NZ_CP047571.1|WP_000122886.1|3799091_3799682_+|carnitine-operon-protein-CaiE
MSYYAFEGLIPVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDTDTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRYHASLHETQPLRQMEENRPRLQGTTDVTPKR
>NZ_CP047571.1|WP_000004397.1|3798300_3799086_+|crotonobetainyl-CoA-hydratase
MSESLHLTRNGSILEITLDRPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGEAPDADFGPGGFAGLTEIFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVVSQAELMDNARELAQQLVNSAPLAIAALKEIFRTTSEMPVEEAYRYIRSGVLKHYPSVLHSEDAIEGPLAFAEKRDPVWKGR
>NZ_CP047571.1|WP_001395601.1|3796638_3798192_+|crotonobetaine/carnitine-CoA-ligase
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTANLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMVQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK
>NZ_CP047571.1|WP_000349936.1|3795347_3796565_+|L-carnitine-CoA-transferase
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
>NZ_CP047571.1|WP_000347117.1|3794076_3795219_+|crotonobetainyl-CoA-dehydrogenase
MDFNLNDEQELFVAGIRELMASENWEAYFAECDRDSVYPERFVKALADMGIDSLLIPEEHGGLDAGFVTLAAVWMELGRLGAPTYVLYQLPGGFNTFLREGTQEQIDKIMAFRGTGKQMWNSAITEPGAGSDVGSLKTTYTRRNGKIYLNGSKCFITSSAYTPYIVVMARDGASPDKPVYTEWFVDMSKPGIKVTKLEKLGLRMDSCCEITFDDVELDEKDMFGREGNGFNRVKEEFDHERFLVALTNYGTAMCAFEDAARYANQRVQFGEAIGRFQLIQEKFAHMAIKLNSMKNMLYEAAWKADNGTITSGDAAMCKYFCANAAFEVVDSAMQVLGGVGIAGNHRISRFWRDLRVDRVSGGSDEMQILTLGRAVLKQYR
>NZ_CP047571.1|WP_000787111.1|3792531_3794046_+|L-carnitine/gamma-butyrobetaine-antiport-BCCT-transporter
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD
>NZ_CP047571.1|WP_000692204.1|3791288_3792059_-|electron-transfer-flavoprotein-FixA
MKIITCYKCVPDEQDIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSRGPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAVNGVSKIISLTADTLTVERELEDETETLSIPLPAVVAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGFNAEAAWSEQQVAAPKQRERQRIVIEGDGEEQIAAFAENLRKVI
>NZ_CP047571.1|WP_001091499.1|3790332_3791274_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNTFSQVWVFSDTPSRLPELMNGAQALANQINTFVLNDADGAQAIQLGANHVWKLNGKPDDRMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSGTFDAAQPDASRTGETHTVEWQAPAVAITRTATQARQSNSVDLDKARLVVSVGRGIGSKENIALAEQLCKAIGAELACSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPALTAALAR
>NZ_CP047571.1|WP_001287715.1|3788995_3790282_-|FAD-dependent-oxidoreductase
MSEDIFDAIIVGAGLAGSVAALVLAREGAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADSAPVERLITHEKLAFMTEKSAMTMDYCNGDETSPSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLVQRDGKVVGVEADGDVIEAKTVILADGVNSILAEKLGMAKRVKPTDVAVGVKELIELPKSVIEDRFQLQGNQGAACLFAGSPTDGLMGGGFLYTNENTLSLGLVCGLHHLHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVGDGVLIAGDAAGMCMNLGFTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLAEYRQHLESGPLRDMRMYQKLPAFLDNPRMFSGYPELAVGVARDLFTIDGSAPELMRKKILRHGKKVGFINLIKDGMKGVTVL
>NZ_CP047571.1|WP_000203741.1|3788711_3788999_-|ferredoxin-like-protein-FixX
MTSPVNVDVKLGVNKFNVDEEHPHIVVKADADKQALELLVKACPAGLYKKQDDGSVRFDYAGCLECGTCRILGLGSALEQWEYPRGTFGVEFRYG
>NZ_CP047571.1|WP_000333125.1|3799890_3800286_-|carnitine-metabolism-transcriptional-regulator-CaiF
MCEGYVEKPLYLLIAEWMMAENRWVIAREISIHFDIEHSKAVNTLTYILSEVTEISCEVKMIPNKLEGRGCQCQRLVKVVDIDEQIYARLRNNSREKLVGVRKTPRIPAVPLTELNREQKWQMMLSKSMRR
>NZ_CP047571.1|WP_001126389.1|3800547_3803769_-|carbamoyl-phosphate-synthase-large-subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLVGVREAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAVERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPAYTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKATGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIRRSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK
>NZ_CP047571.1|WP_001734803.1|3803786_3804935_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKCHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIVPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK
>NZ_CP047571.1|WP_000543606.1|3805390_3806212_-|4-hydroxy-tetrahydrodipicolinate-reductase
MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLNLHNL
>NZ_CP047571.1|WP_001239137.1|3806378_3807293_-|ribonucleoside-hydrolase-RihC
MRLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEKTTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIPAFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTPNAEFNIAADPEAAACVFRSGIEIVMCGLDVTNQAILTPDYLATLPELNRTGKMLHALFSHYRSGSMQSGLRMHDLCAIAWLVRPDLFTLKPCFVAVETQGEFTSGTTVVDIDGCLGKPANVQVALDLNVKGFQQWVAEVLALVP
>NZ_CP047571.1|WP_160177631.1|3807358_3808309_-|4-hydroxy-3-methylbut-2-enyl-diphosphate-reductase
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRMGKRAFLIGDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD
>NZ_CP047571.1|WP_160177632.1|3808310_3808760_-|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MSESVQSNSAILVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLKPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA
>NZ_CP047571.1|WP_000083369.1|3808867_3809362_-|signal-peptidase-II
MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFPSLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRSKATQKLNNIAYALIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSKAKKQ
>NZ_CP047571.1|WP_001286884.1|3809361_3812178_-|isoleucine--tRNA-ligase
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPIELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVDQDALKAKFGVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKDLVESVMQRIGVTDYTILGTVKGAELELLRFSHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAWWDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHSSVVDVRPEFAGHAADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMVVLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGLADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALGDELRFVLLTSGATVADYNDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKVAEHAEICGRCVSNVAGDGEKRKFA
>NZ_CP047571.1|WP_000767329.1|3812220_3813162_-|bifunctional-riboflavin-kinase/FAD-synthetase
MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGRKRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAALTAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEGGVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQVSPVKGVYAVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVLRKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA

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Crispr_ID: NZ_CP047571_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047571_11

3863800-3863941

Orphan

Consensus_repeat	Method
TGTAGGCATGATAAGACGCGTCAAGCGTCGCATCAGGCATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047571_11

>merge|NZ_CP047571|11|3863800-3863941|CRISPRCasFinder
TGTAGGCATGATAAGACGCGTCAAGCGTCGCATCAGGCATTGTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAAACCTGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATT

>NZ_CP047571|11|10|3863800-3863941|CRISPRCasFinder
TGTAGGCATGATAAGACGCGTCAAGCGTCGCATCAGGCATT	GTGCGCCAACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCGGCACAAACC
TGTAGGCATGATAAGACGCGACAAGCGTCGCATCAGGCATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047571.1\|WP_000870700.1\|3868918_3869596_-\|pyrimidine-5'-nucleotidase	unknown	unknown	gnl\|CDD\|181865
NZ_CP047571.1\|WP_000490275.1\|3865952_3866114_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP047571.1\|WP_001143194.1\|3861379_3862930_+\|YjjI-family-glycine-radical-enzyme	unknown	unknown	gnl\|CDD\|182879
NZ_CP047571.1\|WP_001088439.1\|3862901_3863765_+\|YjjW-family-glycine-radical-enzyme-activase	unknown	unknown	gnl\|CDD\|274938
NZ_CP047571.1\|WP_000477811.1\|3858893_3860216_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_CP047571.1\|WP_000224879.1\|3856819_3857539_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP047571.1\|WP_001132956.1\|3853601_3854570_-\|phosphoserine-phosphatase	unknown	unknown	gnl\|CDD\|182988
NZ_CP047571.1\|WP_000175943.1\|3867238_3868828_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP047571.1\|WP_000563058.1\|3863978_3864761_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|171118
NZ_CP047571.1\|WP_000124615.1\|3854675_3855320_+\|YtjB-family-periplasmic-protein	unknown	unknown	gnl\|CDD\|236885
NZ_CP047571.1\|WP_001272337.1\|3870541_3871573_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	unknown	unknown	gnl\|CDD\|181902
NZ_CP047571.1\|WP_001295748.1\|3866240_3866846_-\|molecular-chaperone-OsmY	unknown	unknown	gnl\|CDD\|182556
NZ_CP047571.1\|WP_001299799.1\|3864757_3865831_-\|patatin-family-protein	unknown	unknown	gnl\|CDD\|227013
NZ_CP047571.1\|WP_000816480.1\|3857618_3858842_-\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP047571.1\|WP_000204021.1\|3870025_3870439_-\|DNA-polymerase-III-subunit-psi	unknown	unknown	gnl\|CDD\|180735
NZ_CP047571.1\|WP_001295412.1\|3860342_3861122_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|235387
NZ_CP047571.1\|WP_001403902.1\|3872233_3872470_-\|DUF1435-domain-containing-protein	unknown	unknown	gnl\|CDD\|369291
NZ_CP047571.1\|WP_000566154.1\|3856395_3856659_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP047571.1\|WP_001092461.1\|3869610_3870057_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|181904
NZ_CP047571.1\|WP_000105890.1\|3855347_3856364_+\|lipoate--protein-ligase-LplA	unknown	unknown	gnl\|CDD\|179655

Protein	Function_ID	Function_description	E-value
NZ_CP047571.1\|WP_000870700.1\|3868918_3869596_-\|pyrimidine-5'-nucleotidase	gnl\|CDD\|181865	PRK09449, PRK09449, dUMP phosphatase; Provisional.	6.04082e-172
NZ_CP047571.1\|WP_000490275.1\|3865952_3866114_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	4.97087e-08
NZ_CP047571.1\|WP_001143194.1\|3861379_3862930_+\|YjjI-family-glycine-radical-enzyme	gnl\|CDD\|182879	PRK10977, PRK10977, hypothetical protein; Provisional.	0
NZ_CP047571.1\|WP_001088439.1\|3862901_3863765_+\|YjjW-family-glycine-radical-enzyme-activase	gnl\|CDD\|274938	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family. Members of this family are radical SAM enzymes, designated YjjW in E. coli, that are paired with and appear to activate a glycyl radical enzyme of unknown function, designated YjjI. This activase and its target are found in Clostridial species as well as E. coli and cousins. Members of this family may be misannotated as pyruvate formate lyase activating enzyme. [Protein fate, Protein modification and repair].	4.0184e-168
NZ_CP047571.1\|WP_000477811.1\|3858893_3860216_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_CP047571.1\|WP_000224879.1\|3856819_3857539_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.02509e-171
NZ_CP047571.1\|WP_001132956.1\|3853601_3854570_-\|phosphoserine-phosphatase	gnl\|CDD\|182988	PRK11133, serB, phosphoserine phosphatase; Provisional.	0
NZ_CP047571.1\|WP_000175943.1\|3867238_3868828_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP047571.1\|WP_000563058.1\|3863978_3864761_-\|metal-dependent-hydrolase	gnl\|CDD\|171118	PRK11449, PRK11449, metal-dependent hydrolase.	1.07007e-180
NZ_CP047571.1\|WP_000124615.1\|3854675_3855320_+\|YtjB-family-periplasmic-protein	gnl\|CDD\|236885	PRK11246, PRK11246, YtjB family periplasmic protein.	1.17132e-151
NZ_CP047571.1\|WP_001272337.1\|3870541_3871573_+\|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC	gnl\|CDD\|181902	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC.	0
NZ_CP047571.1\|WP_001295748.1\|3866240_3866846_-\|molecular-chaperone-OsmY	gnl\|CDD\|182556	PRK10568, PRK10568, molecular chaperone OsmY.	4.36119e-102
NZ_CP047571.1\|WP_001299799.1\|3864757_3865831_-\|patatin-family-protein	gnl\|CDD\|227013	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only].	1.51698e-167
NZ_CP047571.1\|WP_000816480.1\|3857618_3858842_-\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP047571.1\|WP_000204021.1\|3870025_3870439_-\|DNA-polymerase-III-subunit-psi	gnl\|CDD\|180735	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated.	1.40986e-69
NZ_CP047571.1\|WP_001295412.1\|3860342_3861122_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|235387	PRK05283, PRK05283, deoxyribose-phosphate aldolase; Provisional.	0
NZ_CP047571.1\|WP_001403902.1\|3872233_3872470_-\|DUF1435-domain-containing-protein	gnl\|CDD\|369291	pfam07256, DUF1435, Protein of unknown function (DUF1435). This family consists of several hypothetical Enterobacterial proteins of around 80 residues in length. The function of this family is unknown.	1.11074e-25
NZ_CP047571.1\|WP_000566154.1\|3856395_3856659_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	4.3021e-05
NZ_CP047571.1\|WP_001092461.1\|3869610_3870057_-\|ribosomal-protein-S18-alanine-N-acetyltransferase	gnl\|CDD\|181904	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional.	1.40837e-111
NZ_CP047571.1\|WP_000105890.1\|3855347_3856364_+\|lipoate--protein-ligase-LplA	gnl\|CDD\|179655	PRK03822, lplA, lipoate-protein ligase A; Provisional.	0

>NZ_CP047571.1|WP_001088439.1|3862901_3863765_+|YjjW-family-glycine-radical-enzyme-activase
MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTMGRCNHCGECVPQCPHQALQIVDGKVVWNAAVCEQCDTCLKRCPQHATPMAQSMSVDEVLSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETGWEKLLPVCDGAMLDLKAWGSECHQQLTGRDNQQIKRSICLLAERGKLAELRLLVIPGQVDYLQHIEELAAFIKGLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRGVGRLIFPALYL
>NZ_CP047571.1|WP_001143194.1|3861379_3862930_+|YjjI-family-glycine-radical-enzyme
MPTSDENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQLPAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLANGSEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPYVRILTQDEIDIRIKRFWRYLDRTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEITPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPITHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEAARNTRILERQPRVISHEQQMRFSQ
>NZ_CP047571.1|WP_001295412.1|3860342_3861122_-|deoxyribose-phosphate-aldolase
MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY
>NZ_CP047571.1|WP_000477811.1|3858893_3860216_-|thymidine-phosphorylase
MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYLPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE
>NZ_CP047571.1|WP_000816480.1|3857618_3858842_-|phosphopentomutase
MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEADNGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGHWEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEHMKTGKPIFYTSADSVFQIACHEGTFGLDKLYELCEIAREELTNGGYNIGRVIARPFIGDKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKATGLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMSLLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLAKYFGTSDMEYGKAMF
>NZ_CP047571.1|WP_000224879.1|3856819_3857539_-|purine-nucleoside-phosphorylase
MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGVDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAERQTTFNDMIKIALESVLLGDKE
>NZ_CP047571.1|WP_000566154.1|3856395_3856659_+|helix-turn-helix-transcriptional-regulator
MIDLENQEREIINLMLSQRISWLAAVRIRHKLSLAEVSKMLGISINSLKQIEKTERFSSNIKSKMAEIYGCPPELLICPSWMTAEHK
>NZ_CP047571.1|WP_000105890.1|3855347_3856364_+|lipoate--protein-ligase-LplA
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTVEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEVITKAFFAHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIAGAVR
>NZ_CP047571.1|WP_000124615.1|3854675_3855320_+|YtjB-family-periplasmic-protein
MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE
>NZ_CP047571.1|WP_001132956.1|3853601_3854570_-|phosphoserine-phosphatase
MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYGRGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLGKIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRSRVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKLRLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEKTEVTIRHADLMGVFCILSGSLNQK
>NZ_CP047571.1|WP_000563058.1|3863978_3864761_-|metal-dependent-hydrolase
MICRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPCTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG
>NZ_CP047571.1|WP_001299799.1|3864757_3865831_-|patatin-family-protein
MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLDEFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGNLIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVIRASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQWFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIALGSRIPALREDYKLGRLCGRYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVANDTLVAEVSDAPQANDPTFNNEDLA
>NZ_CP047571.1|WP_000490275.1|3865952_3866114_-|DUF1328-domain-containing-protein
MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLVSLFMGRKRP
>NZ_CP047571.1|WP_001295748.1|3866240_3866846_-|molecular-chaperone-OsmY
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>NZ_CP047571.1|WP_000175943.1|3867238_3868828_-|peptide-chain-release-factor-3
MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAGTVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRTLTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVENELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAAVGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWAPAPMPRQTDTRTVEASEDKFTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQVRTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPNFAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVVSRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSMVNLRLAQERYPDVQFHQTREH
>NZ_CP047571.1|WP_000870700.1|3868918_3869596_-|pyrimidine-5'-nucleotidase
MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQAVNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVSLLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGVAKPNKKIFDYALEQAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHREQPEGIAPTWTVSSLHELEQLLCKH
>NZ_CP047571.1|WP_001092461.1|3869610_3870057_-|ribosomal-protein-S18-alanine-N-acetyltransferase
MNTISSLETTDLPAAYHIEQRAHAFPWSEKTFASNQGERYLNFQLTQNGKMAAFAITQVVLDEATLFNIAVDPDYQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM
>NZ_CP047571.1|WP_000204021.1|3870025_3870439_-|DNA-polymerase-III-subunit-psi
MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVANDLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQVASPALTELRANPTARTALWQQICTYEHDFFPRND
>NZ_CP047571.1|WP_001272337.1|3870541_3871573_+|16S-rRNA-(guanine(1207)-N(2))-methyltransferase-RsmC
MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRAHTQQFHHWQVLSRQMGDNARFSLVATANDVADCDTLIYYWPKNKPEAQFQLMNLLSLLPVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWGEYSVDGLTIKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRAIMTRQAKKG
>NZ_CP047571.1|WP_001403902.1|3872233_3872470_-|DUF1435-domain-containing-protein
MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTPVMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11835-11866	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42178	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36520-36551	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1588	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9506-9537	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94787	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65534-65565	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61947	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64165-64196	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20317	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119284-119315	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85099-85130	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46719	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42116-42147	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87237-87268	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81884	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70500-70531	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47892	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62997-63028	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MH422554	Escherichia phage P1, complete genome	87194-87225	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NC_050152	Enterobacteria phage P7, complete genome	93995-94026	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58645-58676	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NC_031129	Salmonella phage SJ46, complete genome	77363-77394	0	1.0
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MH445381	Escherichia virus P1, complete genome	56870-56901	0	1.0
NZ_CP047571_5	5.1\|2729574\|40\|NZ_CP047571\|CRISPRCasFinder	2729574-2729613	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP047571_9	9.1\|3792167\|43\|NZ_CP047571\|PILER-CR	3792167-3792209	43	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	141084-141126	0	1.0
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP038506	Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence	11833-11866	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	CP042641	Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence	36518-36551	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP027443	Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence	9504-9537	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP027223	Escherichia coli strain 2015C-3101 plasmid unnamed2	65532-65565	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP027590	Escherichia coli strain 2014C-3011 plasmid unnamed2	64163-64196	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP033632	Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence	119282-119315	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_AP018798	Escherichia coli strain E2855 plasmid pE2855-2, complete sequence	85097-85130	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	CP027320	Escherichia coli strain 2014C-3084 plasmid unnamed1	42114-42147	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NC_013370	Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence	87235-87268	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MN510445	Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence	70498-70531	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP012491	Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence	62995-63028	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MH422554	Escherichia phage P1, complete genome	87192-87225	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NC_050152	Enterobacteria phage P7, complete genome	93993-94026	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MH445380	Escherichia virus P1 isolate transconjugant 2(L-II), complete genome	58643-58676	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MH445381	Escherichia virus P1, complete genome	56868-56901	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP019283	Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence	42147-42180	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP034821	Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence	1557-1590	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP027575	Escherichia coli strain 2013C-4081 plasmid unnamed2	94756-94789	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP030188	Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence	61916-61949	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP039862	Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence	20286-20319	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	CP012494	Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence	46688-46721	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP026475	Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence	81853-81886	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MN510447	Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence	47861-47894	1	0.971
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NC_031129	Salmonella phage SJ46, complete genome	77363-77396	1	0.971
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71197	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71610	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57771-57802	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49237-49268	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80675	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43971	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30387-30418	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71884	2	0.938
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69191	2	0.938
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17440-17471	2	0.938
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122310-122341	2	0.938
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6029-6060	2	0.938
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15152	2	0.938
NZ_CP047571_2	2.17\|983089\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983089-983120	32	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131402-131433	2	0.938
NZ_CP047571_4	4.1\|2101429\|38\|NZ_CP047571\|CRISPRCasFinder	2101429-2101466	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP041423	Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence	57769-57802	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP019013	Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence	49235-49268	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP031136	Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence	30385-30418	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP023851	Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence	71166-71199	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP048306	Escherichia coli strain 9 plasmid p009_B, complete sequence	71579-71612	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP022167	Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence	80644-80677	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	43940-43973	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	NZ_MH257954	Escherichia coli strain 104 plasmid pHXH-2, complete sequence	71853-71886	3	0.912
NZ_CP047571_2	2.33\|983028\|34\|NZ_CP047571\|PILER-CR	983028-983061	34	CP053388	Escherichia phage CMS-2020a, complete sequence	69160-69193	3	0.912
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_KP453775	Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence	17438-17471	3	0.912
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP017632	Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence	122308-122341	3	0.912
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP030285	Escherichia coli strain E308 plasmid pLKSZ04, complete sequence	6027-6060	3	0.912
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	MN510446	Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence	131400-131433	3	0.912
NZ_CP047571_2	2.34\|983089\|34\|NZ_CP047571\|PILER-CR	983089-983122	34	NZ_CP036204	Escherichia coli strain L725 plasmid punnamed2, complete sequence	15121-15154	3	0.912
NZ_CP047571_2	2.4\|982296\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982296-982327	32	L40418	Bacteriophage phi-80 gene, complete cds	198-229	5	0.844
NZ_CP047571_2	2.4\|982296\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982296-982327	32	NC_016158	Escherichia phage HK639, complete genome	47366-47397	5	0.844
NZ_CP047571_2	2.4\|982296\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982296-982327	32	NC_021190	Enterobacteria phage phi80, complete genome	43762-43793	5	0.844
NZ_CP047571_2	2.4\|982296\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982296-982327	32	MN013086	Klebsiella phage vB_Kpn_Chronis, complete genome	44368-44399	5	0.844
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	14532-14563	5	0.844
NZ_CP047571_2	2.12\|982784\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982784-982815	32	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35539	5	0.844
NZ_CP047571_1	1.1\|954466\|33\|NZ_CP047571\|PILER-CR	954466-954498	33	NC_028997	Enterobacteria phage JenP2, complete genome	11822-11854	6	0.818
NZ_CP047571_1	1.14\|954467\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954467-954498	32	NC_028997	Enterobacteria phage JenP2, complete genome	11823-11854	6	0.812
NZ_CP047571_1	1.22\|954955\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954955-954986	32	MN693675	Marine virus AFVG_250M630, complete genome	14302-14333	6	0.812
NZ_CP047571_1	1.22\|954955\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954955-954986	32	MN693578	Marine virus AFVG_25M520, complete genome	14539-14570	6	0.812
NZ_CP047571_2	2.12\|982784\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982784-982815	32	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31723	6	0.812
NZ_CP047571_2	2.29\|982784\|34\|NZ_CP047571\|PILER-CR	982784-982817	34	NZ_CP011408	Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence	35508-35541	6	0.824
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24789-24826	6	0.842
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	24902-24939	6	0.842
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4073-4110	6	0.842
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4072-4109	6	0.842
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4072-4109	6	0.842
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4072-4109	6	0.842
NZ_CP047571_1	1.9\|954954\|33\|NZ_CP047571\|PILER-CR	954954-954986	33	MN693675	Marine virus AFVG_250M630, complete genome	14301-14333	7	0.788
NZ_CP047571_1	1.9\|954954\|33\|NZ_CP047571\|PILER-CR	954954-954986	33	MN693578	Marine virus AFVG_25M520, complete genome	14538-14570	7	0.788
NZ_CP047571_1	1.26\|955199\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	955199-955230	32	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755173-755204	7	0.781
NZ_CP047571_2	2.11\|982723\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982723-982754	32	NZ_LN907828	Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence	481341-481372	7	0.781
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897557	7	0.781
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585720-585751	7	0.781
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89866-89897	7	0.781
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97239-97270	7	0.781
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75914-75945	7	0.781
NZ_CP047571_2	2.23\|982418\|34\|NZ_CP047571\|PILER-CR	982418-982451	34	NC_005262	Burkholderia cepacia phage Bcep22, complete genome	14532-14565	7	0.794
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4158-4217	7	0.883
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4157-4216	7	0.883
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	115798-115857	7	0.883
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4157-4216	7	0.883
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4157-4216	7	0.883
NZ_CP047571_1	1.13\|955198\|33\|NZ_CP047571\|PILER-CR	955198-955230	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP042483	Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence	203564-203595	8	0.75
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	52827-52858	8	0.75
NZ_CP047571_1	1.24\|955077\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	955077-955108	32	CP022610	Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence	10541-10572	8	0.75
NZ_CP047571_1	1.26\|955199\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	955199-955230	32	NZ_CP007070	Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence	191920-191951	8	0.75
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	228659-228690	8	0.75
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	NZ_CP022369	Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence	109417-109448	8	0.75
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	986591-986622	8	0.75
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1102947-1102978	8	0.75
NZ_CP047571_2	2.13\|982845\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982845-982876	32	NZ_CP011054	Halomonas sp. KO116 plasmid unnamed2, complete sequence	177867-177898	8	0.75
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34251	8	0.75
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13805-13836	8	0.75
NZ_CP047571_2	2.29\|982784\|34\|NZ_CP047571\|PILER-CR	982784-982817	34	NZ_CP054046	Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence	31692-31725	8	0.765
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	3331-3368	8	0.789
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	3330-3367	8	0.789
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	3330-3367	8	0.789
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	3330-3367	8	0.789
NZ_CP047571_1	1.8\|954893\|33\|NZ_CP047571\|PILER-CR	954893-954925	33	NZ_CP020440	Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence	52826-52858	9	0.727
NZ_CP047571_1	1.11\|955076\|33\|NZ_CP047571\|PILER-CR	955076-955108	33	CP022610	Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence	10540-10572	9	0.727
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP033509	Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743b, complete sequence	2242-2273	9	0.719
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP033370	Mesorhizobium loti strain SU343 plasmid pMLSU343b, complete sequence	6520-6551	9	0.719
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP035181	Klebsiella pneumoniae strain BA33875 plasmid pBA33875_KPC2, complete sequence	37575-37606	9	0.719
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP007257	Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence	14954-14985	9	0.719
NZ_CP047571_1	1.21\|954894\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954894-954925	32	NZ_CP022567	Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence	33848-33879	9	0.719
NZ_CP047571_1	1.22\|954955\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954955-954986	32	NZ_LT960613	Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence	10510-10541	9	0.719
NZ_CP047571_1	1.22\|954955\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954955-954986	32	NZ_CP018682	Vibrio harveyi isolate QT520 plasmid p1, complete sequence	47003-47034	9	0.719
NZ_CP047571_1	1.23\|955016\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	955016-955047	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4515488-4515519	9	0.719
NZ_CP047571_2	2.3\|982235\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982235-982266	32	NZ_CP012203	Alteromonas macleodii strain HOT1A3 plasmid pAM1A3, complete sequence	21771-21802	9	0.719
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	188114-188145	9	0.719
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NZ_CP019309	Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence	101463-101494	9	0.719
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	MT028491	Ochrobactrum phage vB_OspM_OC, complete genome	50790-50821	9	0.719
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	NZ_CP011009	Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence	147371-147402	9	0.719
NZ_CP047571_2	2.16\|983028\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	983028-983059	32	MN693961	Marine virus AFVG_250M531, complete genome	39943-39974	9	0.719
NZ_CP047571_2	2.19\|982174\|34\|NZ_CP047571\|PILER-CR	982174-982207	34	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	5384-5417	9	0.735
NZ_CP047571_2	2.19\|982174\|34\|NZ_CP047571\|PILER-CR	982174-982207	34	NZ_CP017244	Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence	1102945-1102978	9	0.735
NZ_CP047571_2	2.30\|982845\|34\|NZ_CP047571\|PILER-CR	982845-982878	34	NC_009620	Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence	897526-897559	9	0.735
NZ_CP047571_2	2.30\|982845\|34\|NZ_CP047571\|PILER-CR	982845-982878	34	NZ_LR594660	Variovorax sp. PBL-H6 plasmid 2	585718-585751	9	0.735
NZ_CP047571_2	2.30\|982845\|34\|NZ_CP047571\|PILER-CR	982845-982878	34	NZ_CP021367	Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence	89864-89897	9	0.735
NZ_CP047571_2	2.30\|982845\|34\|NZ_CP047571\|PILER-CR	982845-982878	34	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	97237-97270	9	0.735
NZ_CP047571_2	2.30\|982845\|34\|NZ_CP047571\|PILER-CR	982845-982878	34	NZ_CP021363	Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence	75912-75945	9	0.735
NZ_CP047571_2	2.31\|982906\|34\|NZ_CP047571\|PILER-CR	982906-982939	34	NZ_CP046399	Bacillus sp. A260 plasmid unnamed11, complete sequence	34220-34253	9	0.735
NZ_CP047571_2	2.31\|982906\|34\|NZ_CP047571\|PILER-CR	982906-982939	34	NZ_CP018742	Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence	13803-13836	9	0.735
NZ_CP047571_6	6.3\|2873460\|33\|NZ_CP047571\|CRISPRCasFinder,CRT	2873460-2873492	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
NZ_CP047571_6	6.5\|2873461\|32\|NZ_CP047571\|PILER-CR	2873461-2873492	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14114-14151	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51843-51880	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229388-229425	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239882-239919	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230794-230831	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211764-211801	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40383-40420	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313601-313638	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386517-386554	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397090-397127	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404135-404172	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	114998-115035	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40307-40344	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	103-140	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31308-31345	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	8897-8934	9	0.763
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	17901-17938	9	0.763
NZ_CP047571_1	1.17\|954650\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954650-954681	32	CP011076	Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence	558038-558069	10	0.688
NZ_CP047571_1	1.17\|954650\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	954650-954681	32	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	115747-115778	10	0.688
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	NZ_CP044976	Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence	5386-5417	10	0.688
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	MN850588	Escherichia phage sortregn, complete genome	18958-18989	10	0.688
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	MK125141	Salmonella phage Lumpael, complete genome	39709-39740	10	0.688
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	KF591601	Enterobacteria phage IME_EC2, complete genome	31455-31486	10	0.688
NZ_CP047571_2	2.2\|982174\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982174-982205	32	MN850623	Escherichia phage sortsyn, complete genome	28465-28496	10	0.688
NZ_CP047571_2	2.5\|982357\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982357-982388	32	MN856084	Bacteriophage sp. isolate 318, complete genome	2955-2986	10	0.688
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NZ_HG938354	Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence	1676914-1676945	10	0.688
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NZ_HG938356	Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence	1511071-1511102	10	0.688
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP020079	Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence	149847-149878	10	0.688
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	225034-225065	10	0.688
NZ_CP047571_2	2.14\|982906\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982906-982937	32	NZ_CP019295	Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence	148571-148602	10	0.688
NZ_CP047571_8	8.1\|3408014\|59\|NZ_CP047571\|CRISPRCasFinder	3408014-3408072	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56040-56077	10	0.737
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP053046	Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence	58275-58312	10	0.737
NZ_CP047571_10	10.1\|3799772\|38\|NZ_CP047571\|CRISPRCasFinder	3799772-3799809	38	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	30215-30252	10	0.737
NZ_CP047571_2	2.6\|982418\|32\|NZ_CP047571\|CRISPRCasFinder,CRT	982418-982449	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	541633-541664	11	0.656
NZ_CP047571_2	2.23\|982418\|34\|NZ_CP047571\|PILER-CR	982418-982451	34	NZ_CP020539	Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence	188112-188145	11	0.676
NZ_CP047571_8	8.1\|3408014\|59\|NZ_CP047571\|CRISPRCasFinder	3408014-3408072	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7435-7494	11	0.817
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84259-84318	11	0.817
NZ_CP047571_11	11.1\|3863841\|60\|NZ_CP047571\|CRISPRCasFinder	3863841-3863900	60	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40377-40436	14	0.767

1. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

2. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

3. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

4. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

5. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

6. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

7. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

8. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

9. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

10. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

11. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

12. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

13. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

14. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

15. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

16. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

17. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

18. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

19. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

20. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

21. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

22. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

23. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

24. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 0, identity: 1.0

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgt	Protospacer
********************************

25. spacer 5.1|2729574|40|NZ_CP047571|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

26. spacer 9.1|3792167|43|NZ_CP047571|PILER-CR matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcacacgcagataaatccaactttcaatattgttaagttcc	CRISPR spacer
tgtcacacgcagataaatccaactttcaatattgttaagttcc	Protospacer
*******************************************

27. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP038506 (Escherichia coli strain 28Eco12 plasmid p28Eco12, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

28. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to CP042641 (Escherichia coli strain NCYU-24-74 plasmid pNCYU-24-74-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

29. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP027443 (Escherichia coli strain 2013C-3252 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

30. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP027223 (Escherichia coli strain 2015C-3101 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

31. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP027590 (Escherichia coli strain 2014C-3011 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

32. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP033632 (Escherichia coli isolate ECCNB12-2 plasmid pTB-nb1, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

33. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_AP018798 (Escherichia coli strain E2855 plasmid pE2855-2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

34. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to CP027320 (Escherichia coli strain 2014C-3084 plasmid unnamed1) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

35. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NC_013370 (Escherichia coli O111:H- str. 11128 plasmid pO111_2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

36. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MN510445 (Escherichia coli strain JIE250 plasmid pJIE250_3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

37. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP012491 (Escherichia coli strain CFSAN004176 plasmid pCFSAN004176P_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

38. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MH422554 (Escherichia phage P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

39. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NC_050152 (Enterobacteria phage P7, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

40. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MH445380 (Escherichia virus P1 isolate transconjugant 2(L-II), complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

41. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MH445381 (Escherichia virus P1, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

42. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP019283 (Escherichia coli strain 13P484A plasmid p13P484A-3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

43. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP034821 (Salmonella sp. SSDFZ54 plasmid pTB502, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

44. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP027575 (Escherichia coli strain 2013C-4081 plasmid unnamed2) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

45. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP030188 (Salmonella enterica strain SA20094620 plasmid pSA20094620.3, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

46. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP039862 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain PNCS014880 plasmid p16-6773.2, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

47. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to CP012494 (Escherichia coli strain CFSAN004177 plasmid pCFSAN004177G_03, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

48. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP026475 (Escherichia coli strain KBN10P04869 plasmid pKBN10P04869B, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

49. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MN510447 (Escherichia coli strain TZ20_1P plasmid pTZ20_1P, complete sequence) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

50. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NC_031129 (Salmonella phage SJ46, complete genome) position: , mismatch: 1, identity: 0.971

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctgaaccgacattcatgttt	Protospacer
******************************** *

51. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

52. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

53. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

54. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

55. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

56. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

57. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

58. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

59. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 2, identity: 0.938

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
atttctacaattatttagctgatgcttttaaa	Protospacer
****** .************************

60. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

61. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgt	Protospacer
***.******** *******************

62. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

63. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgt	Protospacer
****************.***** *********

64. spacer 2.17|983089|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 2, identity: 0.938

ggtaaaaacacggtctgaaccgacattcatgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgt	Protospacer
************ * *****************

65. spacer 4.1|2101429|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

66. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP041423 (Escherichia coli strain STEC409 plasmid pSTEC409_1, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

67. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP019013 (Escherichia coli strain Ecol_AZ162 plasmid pECAZ162_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

68. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP031136 (Escherichia coli strain CFSAN064035 plasmid pGMI17-003_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

69. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP023851 (Escherichia coli strain 4/0 plasmid p4_0.2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

70. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP048306 (Escherichia coli strain 9 plasmid p009_B, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

71. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP022167 (Escherichia coli strain M160133 plasmid pM160133_p3, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

72. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_CP019027 (Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

73. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to NZ_MH257954 (Escherichia coli strain 104 plasmid pHXH-2, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

74. spacer 2.33|983028|34|NZ_CP047571|PILER-CR matches to CP053388 (Escherichia phage CMS-2020a, complete sequence) position: , mismatch: 3, identity: 0.912

atttctttaattatttagctgatgcttttaaagt	CRISPR spacer
atttctacaattatttagctgatgcttttaaagc	Protospacer
****** .*************************.

75. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_KP453775 (Klebsiella pneumoniae strain ST11 plasmid pKP12226, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

76. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP017632 (Escherichia coli strain SLK172 plasmid pSLK172-1, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtgaaaacacgttctgaaccgacattcatgttt	Protospacer
***.******** ******************* *

77. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP030285 (Escherichia coli strain E308 plasmid pLKSZ04, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

78. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to MN510446 (Escherichia coli strain SvETEC plasmid pSvP1_F, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacgttatgaaccgacattcatgttt	Protospacer
************ * ***************** *

79. spacer 2.34|983089|34|NZ_CP047571|PILER-CR matches to NZ_CP036204 (Escherichia coli strain L725 plasmid punnamed2, complete sequence) position: , mismatch: 3, identity: 0.912

ggtaaaaacacggtctgaaccgacattcatgtgt	CRISPR spacer
ggtaaaaacacggtctaaaccgtcattcatgttt	Protospacer
****************.***** ********* *

80. spacer 2.4|982296|32|NZ_CP047571|CRISPRCasFinder,CRT matches to L40418 (Bacteriophage phi-80 gene, complete cds) position: , mismatch: 5, identity: 0.844

taaggtaa--acgctatgaattatccggcagttg	CRISPR spacer
--aggtaaagacgctatgaataatccgtcagtta	Protospacer
  ******  *********** ***** *****.

81. spacer 2.4|982296|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_016158 (Escherichia phage HK639, complete genome) position: , mismatch: 5, identity: 0.844

taaggtaa--acgctatgaattatccggcagttg	CRISPR spacer
--aggtaaagacgctatgaataatccgtcagtta	Protospacer
  ******  *********** ***** *****.

82. spacer 2.4|982296|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_021190 (Enterobacteria phage phi80, complete genome) position: , mismatch: 5, identity: 0.844

taaggtaa--acgctatgaattatccggcagttg	CRISPR spacer
--aggtaaagacgctatgaataatccgtcagtta	Protospacer
  ******  *********** ***** *****.

83. spacer 2.4|982296|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN013086 (Klebsiella phage vB_Kpn_Chronis, complete genome) position: , mismatch: 5, identity: 0.844

taaggtaa--acgctatgaattatccggcagttg	CRISPR spacer
--aggtaaagacgctatgaataatccgtcagtta	Protospacer
  ******  *********** ***** *****.

84. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 5, identity: 0.844

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
cgatcggcaacagcatggcagtgccgtgcatg	Protospacer
****************** .******   ***

85. spacer 2.12|982784|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 5, identity: 0.844

agattggttttccagtctttggcggttggcaa	CRISPR spacer
agattggttttccagtctttcgcggtcggagt	Protospacer
******************** *****.** .

86. spacer 1.1|954466|33|NZ_CP047571|PILER-CR matches to NC_028997 (Enterobacteria phage JenP2, complete genome) position: , mismatch: 6, identity: 0.818

gcggggaggaattccgtgcagtaatggagaacg	CRISPR spacer
gtggggatgaattccgttcagtaatggaacaag	Protospacer
*.***** ********* **********. * *

87. spacer 1.14|954467|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_028997 (Enterobacteria phage JenP2, complete genome) position: , mismatch: 6, identity: 0.812

cggggaggaattccgtgcagtaatggagaacg	CRISPR spacer
tggggatgaattccgttcagtaatggaacaag	Protospacer
.***** ********* **********. * *

88. spacer 1.22|954955|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 6, identity: 0.812

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

89. spacer 1.22|954955|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 6, identity: 0.812

-gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
agtgt-ccagttataaaaaacccaccatcatta	Protospacer
 ***. ****.**********.******** .*

90. spacer 2.12|982784|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

agattggttttccagtctttggcggttggcaa	CRISPR spacer
aagttggttttccagtctttggcggtcgggtt	Protospacer
*..***********************.**

91. spacer 2.29|982784|34|NZ_CP047571|PILER-CR matches to NZ_CP011408 (Vibrio parahaemolyticus strain FORC_014 plasmid pFORC14, complete sequence) position: , mismatch: 6, identity: 0.824

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
agattggttttccagtctttcgcggtcggagtga	Protospacer
******************** *****.** . *

92. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

93. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttgatgtcggatgcggcgtaaacgccttatccgaccta	Protospacer
* * *************.**************.***..

94. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

95. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

96. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

97. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 6, identity: 0.842

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
taactgccggatgcggcataaacgccttatccggccta	Protospacer
**.***.*************************..**..

98. spacer 1.9|954954|33|NZ_CP047571|PILER-CR matches to MN693675 (Marine virus AFVG_250M630, complete genome) position: , mismatch: 7, identity: 0.788

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

99. spacer 1.9|954954|33|NZ_CP047571|PILER-CR matches to MN693578 (Marine virus AFVG_25M520, complete genome) position: , mismatch: 7, identity: 0.788

-ggtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aagtgt-ccagttataaaaaacccaccatcatta	Protospacer
 .***. ****.**********.******** .*

100. spacer 1.26|955199|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.781

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
ccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
 *******.**************** *.. *.

101. spacer 2.11|982723|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_LN907828 (Erwinia gerundensis isolate E_g_EM595 plasmid pEM01, complete sequence) position: , mismatch: 7, identity: 0.781

-cttataaccggcggcaaaaatcgtcgcgttgg	CRISPR spacer
gcagacaa-aggcggcaaaaatagtcgcgctgg	Protospacer
 *  *.**  ************ ******.***

102. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ttacgccggtatcccgctccctgttcagccga	Protospacer
.*..******* *** **************

103. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

104. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

105. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

106. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtgccggtagccccctccctgttcagcctc	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccc	Protospacer
**********.*** ********* *.. *.*

107. spacer 2.23|982418|34|NZ_CP047571|PILER-CR matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 7, identity: 0.794

cgatcggcaacagcatggaggtgccggtaatgga	CRISPR spacer
cgatcggcaacagcatggcagtgccgtgcatgcg	Protospacer
****************** .******   *** .

108. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 7, identity: 0.883

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc-ggcacaaa	CRISPR spacer
ggtgca-caactgccggatgcggcgtgaacgccttatccgtcctaccgttcaggcacaag	Protospacer
 ****. ********************************* ***** **** *******.

109. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 7, identity: 0.883

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc-ggcacaaa	CRISPR spacer
ggtgca-caactgccggatgcggcgtgaacgccttatccgtcctaccgttcaggcacaag	Protospacer
 ****. ********************************* ***** **** *******.

110. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 7, identity: 0.883

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc-ggcacaaa	CRISPR spacer
ggtgca-caactgccggatgcggcgtgaacgccttatccgtcctaccgttcaggcacaag	Protospacer
 ****. ********************************* ***** **** *******.

111. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 7, identity: 0.883

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc-ggcacaaa	CRISPR spacer
ggtgca-caactgccggatgcggcgtgaacgccttatccgtcctaccgttcaggcacaag	Protospacer
 ****. ********************************* ***** **** *******.

112. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 7, identity: 0.883

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttc-ggcacaaa	CRISPR spacer
ggtgca-caactgccggatgcggcgtgaacgccttatccgtcctaccgttcaggcacaag	Protospacer
 ****. ********************************* ***** **** *******.

113. spacer 1.13|955198|33|NZ_CP047571|PILER-CR matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

gacgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
tccgtggtcgtgggtgctgctgttgctggagcg	Protospacer
  *******.**************** *.. *.

114. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP042483 (Klebsiella pneumoniae strain C51 plasmid pC51_002, complete sequence) position: , mismatch: 8, identity: 0.75

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
ttatccgcgaccgccaggcggcgcggggggat	Protospacer
* ***************..*******   * .

115. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
acccccgccagcgccagatggcgcggcccgcc	Protospacer
   .**** * *****************.*.*

116. spacer 1.24|955077|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

caaaaaaataatatccggcagtctgtacggta	CRISPR spacer
aagaaaaatcatatccggcagtctttagcgag	Protospacer
 *.****** ************** **  * .

117. spacer 1.26|955199|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP007070 (Rhizobium leguminosarum bv. trifolii CB782 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

acgtggtcatgggtgctgctgttgcagagcca	CRISPR spacer
atgcggtcatggatgctgatgttgcagtgatg	Protospacer
*.*.********.***** ******** * ..

118. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 8, identity: 0.75

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
ggatggatggagagcgcgaagatcggggtgcc	Protospacer
* *  ****** ******.********* * .

119. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 8, identity: 0.75

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
ggggtgatcggcagcgcggagatcgggcggct	Protospacer
* ..**** *.**************** .* *

120. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 8, identity: 0.75

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
gaagcggccgacagagcggagatcggcgaggt	Protospacer
* *..*.. ***** *********** *****

121. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 8, identity: 0.75

-----gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
ttctggca-----cgacagcgcggggatcggcgaggt	Protospacer
     ***      **********.****** *****

122. spacer 2.13|982845|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP011054 (Halomonas sp. KO116 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ctgtgc---cggtagccccctccctgttcagcctc	CRISPR spacer
---tgcgagcggtaacccccaccctgttcagctct	Protospacer
   ***   *****.***** ***********...

123. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

124. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 8, identity: 0.75

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttc	Protospacer
*. *******.*** ************  *

125. spacer 2.29|982784|34|NZ_CP047571|PILER-CR matches to NZ_CP054046 (Yersinia massiliensis strain 2011N-4075 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

agattggttttccagtctttggcggttggcaagt	CRISPR spacer
aagttggttttccagtctttggcggtcgggttaa	Protospacer
*..***********************.**   .

126. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

127. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

128. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

129. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.789

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
.*.***.**********.**************. **..

130. spacer 1.8|954893|33|NZ_CP047571|PILER-CR matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

ttgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gacccccgccagcgccagatggcgcggcccgcc	Protospacer
    .**** * *****************.*.*

131. spacer 1.11|955076|33|NZ_CP047571|PILER-CR matches to CP022610 (Escherichia coli strain ATCC 700415 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.727

gcaaaaaaataatatccggcagtctgtacggta	CRISPR spacer
taagaaaaatcatatccggcagtctttagcgag	Protospacer
  *.****** ************** **  * .

132. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP033509 (Mesorhizobium jarvisii strain ATCC 700743 plasmid pMJ700743b, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gtccccgcgcacgccagatggcgcggcagggc	Protospacer
   .*****  ****************  * *

133. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP033370 (Mesorhizobium loti strain SU343 plasmid pMLSU343b, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
gtccccgcgcacgccagatggcgcggcagggc	Protospacer
   .*****  ****************  * *

134. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP035181 (Klebsiella pneumoniae strain BA33875 plasmid pBA33875_KPC2, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
ttttccgcgaccgccaggcggcgcgggggatg	Protospacer
*  **************..*******   .*

135. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP007257 (Rhodococcus erythropolis R138 plasmid pLRE138, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
tgatccgcgacggccggatggcgggaaacaac	Protospacer
*********** ***.******* *.  .. *

136. spacer 1.21|954894|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP022567 (Rhizobium leguminosarum bv. viciae strain BIHB 1148 plasmid pSK03, complete sequence) position: , mismatch: 9, identity: 0.719

tgatccgcgaccgccagatggcgcggcctgtc	CRISPR spacer
tcatgcgcgaccggcagatggcgcgaacccga	Protospacer
* ** ******** ***********. *.

137. spacer 1.22|954955|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_LT960613 (Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600 plasmid P, complete sequence) position: , mismatch: 9, identity: 0.719

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggcgccagctacaaaaagctcaccttgagtt	Protospacer
. **********.*****.****** * *..

138. spacer 1.22|954955|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP018682 (Vibrio harveyi isolate QT520 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

gtgcgccagctataaaaaactcaccatcaaca	CRISPR spacer
aggctccagctacaaaaaactcaccttgagtt	Protospacer
. ** *******.************ * *..

139. spacer 1.23|955016|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

ctatagcagcactccaccagctcgagcagcag	CRISPR spacer
cgggtgtgtcactcgaccagctccagcagcag	Protospacer
* .  *.. ***** ******** ********

140. spacer 2.3|982235|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP012203 (Alteromonas macleodii strain HOT1A3 plasmid pAM1A3, complete sequence) position: , mismatch: 9, identity: 0.719

cgcgccactaacagaagtatgtgctggttcag	CRISPR spacer
ctggccactaacagaattatgttctgcgccgc	Protospacer
*  ************* ***** ***  .*.

141. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 9, identity: 0.719

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
gcatcggcaacagcatcgaggcgccgatccgc	Protospacer
  ************** ****.****.*

142. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP019309 (Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence) position: , mismatch: 9, identity: 0.719

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
cgatcggcaacggcatggaagtgaaccccatt	Protospacer
***********.*******.***    . **

143. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MT028491 (Ochrobactrum phage vB_OspM_OC, complete genome) position: , mismatch: 9, identity: 0.719

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tcgtttagagtggtgtattcaaaatctttgac	Protospacer
*  *******  **************    *

144. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP011009 (Bacillus simplex strain SH-B26 plasmid pSHB26, complete sequence) position: , mismatch: 9, identity: 0.719

atttctttaattatttagctgatgcttttaaa	CRISPR spacer
ttatctttaattattgagatgatgctccgcat	Protospacer
 * ************ ** *******..  *

145. spacer 2.16|983028|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN693961 (Marine virus AFVG_250M531, complete genome) position: , mismatch: 9, identity: 0.719

atttcttt-----aattatttagctgatgcttttaaa	CRISPR spacer
-----tatgaaagaattatttagctgatgcagttaag	Protospacer
     * *     *****************  ****.

146. spacer 2.19|982174|34|NZ_CP047571|PILER-CR matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 9, identity: 0.735

gcaatgatggacagcgcggagatcg-gggaggtga	CRISPR spacer
tcaatcatggccagcgcggagatcgcaccaagtc-	Protospacer
 **** **** ************** .  *.**

147. spacer 2.19|982174|34|NZ_CP047571|PILER-CR matches to NZ_CP017244 (Rhizobium etli 8C-3 plasmid pRsp8C3c, complete sequence) position: , mismatch: 9, identity: 0.735

-----gcaatgatggacagcgcggagatcggggaggtga	CRISPR spacer
ttctggca-----cgacagcgcggggatcggcgaggtgc	Protospacer
     ***      **********.****** ******

148. spacer 2.30|982845|34|NZ_CP047571|PILER-CR matches to NC_009620 (Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ttacgccggtatcccgctccctgttcagccgacc	Protospacer
.*..******* *** **************   .

149. spacer 2.30|982845|34|NZ_CP047571|PILER-CR matches to NZ_LR594660 (Variovorax sp. PBL-H6 plasmid 2) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

150. spacer 2.30|982845|34|NZ_CP047571|PILER-CR matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

151. spacer 2.30|982845|34|NZ_CP047571|PILER-CR matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

152. spacer 2.30|982845|34|NZ_CP047571|PILER-CR matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 9, identity: 0.735

ctgtgccggtagccccctccctgttcagcctcgt	CRISPR spacer
ctgtgccggtggccacctccctgtgcgaaccctg	Protospacer
**********.*** ********* *.. *.*

153. spacer 2.31|982906|34|NZ_CP047571|PILER-CR matches to NZ_CP046399 (Bacillus sp. A260 plasmid unnamed11, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

154. spacer 2.31|982906|34|NZ_CP047571|PILER-CR matches to NZ_CP018742 (Bacillus cereus strain FORC_047 plasmid pFORC47_2, complete sequence) position: , mismatch: 9, identity: 0.735

tgttttagagatgtgtattcaaaatcagatagga	CRISPR spacer
taatttagaggtgtttattcaaaatcatcttcta	Protospacer
*. *******.*** ************  *   *

155. spacer 6.3|2873460|33|NZ_CP047571|CRISPRCasFinder,CRT matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

156. spacer 6.5|2873461|32|NZ_CP047571|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

157. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tgattgccggatgcggcgtaaacgccttatccggccta	Protospacer
*...**.**********.**************..**..

158. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ctggtgccggatgcggcgtaaacgccttatccggccta	Protospacer
. * **.**********.**************..**..

159. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

160. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

161. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

162. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cgactgccggatgcggcgtaaacgccttatccggccta	Protospacer
...***.**********.**************..**..

163. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

164. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aaaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
 *. **.**********.**************..**..

165. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caagtgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

166. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caattgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*..**.**********.**************..**..

167. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ttcttgccggatgcggcgtaaacgccttatccggccta	Protospacer
*  .**.**********.**************..**..

168. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccactgccggatgcggcgtaaacgccttatccgtccta	Protospacer
. .***.**********.**************. **..

169. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
tttatgccggatgcggcgtaaacgccttatccggccta	Protospacer
*   **.**********.**************..**..

170. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
atgttgccggatgcggcgtaaacgccttatccggccta	Protospacer
  *.**.**********.**************..**..

171. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatccggccta	Protospacer
.*. **.**********.**************..**..

172. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
cggttgccggatgcggcgtaaacgccttatccggccta	Protospacer
..*.**.**********.**************..**..

173. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 9, identity: 0.763

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
gacttgccggatgcggcgtaaacgccttatccggccac	Protospacer
 * .**.**********.**************..**

174. spacer 1.17|954650|32|NZ_CP047571|CRISPRCasFinder,CRT matches to CP011076 (Brevibacillus laterosporus strain B9 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgatcaggaaaatgaattcctggaaaaaaa	CRISPR spacer
aaacatcagcaaaatgaatttctggaagagcc	Protospacer
    ***** **********.******.*.

175. spacer 1.17|954650|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.688

ctcgatcaggaaaatgaattcctggaaaaaaa	CRISPR spacer
acaacaaaggaaaaggagttcctggaaaaata	Protospacer
 . .   ******* **.************ *

176. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP044976 (Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2) plasmid pPBL-H3_B2-1, complete sequence) position: , mismatch: 10, identity: 0.688

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
tcaatcatggccagcgcggagatcgcaccaag	Protospacer
 **** **** ************** .  ..

177. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN850588 (Escherichia phage sortregn, complete genome) position: , mismatch: 10, identity: 0.688

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
atcgcgctggacagcgaggggatcggggagca	Protospacer
.. ..* ********* **.**********

178. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MK125141 (Salmonella phage Lumpael, complete genome) position: , mismatch: 10, identity: 0.688

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
atcgcgctggacagcgaggggatcggggagca	Protospacer
.. ..* ********* **.**********

179. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to KF591601 (Enterobacteria phage IME_EC2, complete genome) position: , mismatch: 10, identity: 0.688

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
atcagcctggacagcgaggggatcggggagca	Protospacer
.. *   ********* **.**********

180. spacer 2.2|982174|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN850623 (Escherichia phage sortsyn, complete genome) position: , mismatch: 10, identity: 0.688

gcaatgatggacagcgcggagatcggggaggt	CRISPR spacer
atcagcctggacagcgaggggatcggggagca	Protospacer
.. *   ********* **.**********

181. spacer 2.5|982357|32|NZ_CP047571|CRISPRCasFinder,CRT matches to MN856084 (Bacteriophage sp. isolate 318, complete genome) position: , mismatch: 10, identity: 0.688

aaatgcaaacagcaagctcaggagaatttact	CRISPR spacer
actccagaacagcaagctaagcagaatttagc	Protospacer
*  .  .*********** ** ******** .

182. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_HG938354 (Neorhizobium galegae bv. orientalis str. HAMBI 540 plasmid pHAMBI540a, complete sequence) position: , mismatch: 10, identity: 0.688

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
tgtccggcaacagcgtggaggggccgggggaa	Protospacer
.* .**********.****** ***** .. .

183. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_HG938356 (Neorhizobium galegae bv. officinalis bv. officinalis str. HAMBI 1141 plasmid pHAMBI1141a, complete sequence) position: , mismatch: 10, identity: 0.688

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
tgtccggcaacagcgtggaggggccgggggaa	Protospacer
.* .**********.****** ***** .. .

184. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

185. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

186. spacer 2.14|982906|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NZ_CP019295 (Vibrio campbellii strain LMB29 plasmid pLMB157, complete sequence) position: , mismatch: 10, identity: 0.688

tgttttagagatgtgtattcaaaatcagatag	CRISPR spacer
tgttttagagctgtgtattaaaacgtttttgt	Protospacer
********** ******** ***  .   *.

187. spacer 8.1|3408014|59|NZ_CP047571|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

188. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
ccattgccggatgcggcgtaaacgccttatccggccta	Protospacer
. ..**.**********.**************..**..

189. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP053046 (Escherichia fergusonii strain HNCF11W plasmid pHNCF11W-130kb, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
aggttgccggatgcggcgtaaacgccttatccggcata	Protospacer
 .*.**.**********.**************..* ..

190. spacer 10.1|3799772|38|NZ_CP047571|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 10, identity: 0.737

tagctgtcggatgcggcataaacgccttatccaacccg	CRISPR spacer
caaatgccggatgcggcgtaaacgccttatctggccta	Protospacer
.*. **.**********.*************...**..

191. spacer 2.6|982418|32|NZ_CP047571|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 11, identity: 0.656

cgatcggcaacagcatggaggtgccggtaatg	CRISPR spacer
gcgtcgccaacagcatggaggtggcgcgcgaa	Protospacer
  .*** **************** **   . .

192. spacer 2.23|982418|34|NZ_CP047571|PILER-CR matches to NZ_CP020539 (Sphingobium herbicidovorans strain MH plasmid pMSHV, complete sequence) position: , mismatch: 11, identity: 0.676

cgatcggcaacagcatggaggtgccggtaatgga	CRISPR spacer
gcatcggcaacagcatcgaggcgccgatccgcag	Protospacer
  ************** ****.****.*    ..

193. spacer 8.1|3408014|59|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*

194. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 11, identity: 0.817

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttcggcacaaac	CRISPR spacer
ggtgca-caattgccggatgcggcgtgaacgccttatccggcctacggttgagtgcagtt	Protospacer
 ****. ***.*************************************** .*..**. .

195. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 11, identity: 0.817

-gtgcgccaactgccggatgcggcgtgaacgccttatccggcctacggttcggcacaaac	CRISPR spacer
ggtgca-caattgccggatgcggcgtgaacgccttatccggcctacggttgagtgcagtt	Protospacer
 ****. ***.*************************************** .*..**. .

196. spacer 11.1|3863841|60|NZ_CP047571|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.767

gtgc-gccaactgccggatgcggcgtgaacgccttatccggcctacggttcggcacaaac	CRISPR spacer
-tacggctttttgccggatgcggcgtaaacgccttatccggcctacggtttggtgcgagt	Protospacer
 *.* **.  .***************.***********************.**..*.*..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

134677 : 144924

Enterobacteria_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077890854.1\|134677_138223_-	glycosyltransferase	Q98VI8	Paramecium_bursaria_Chlorella_virus	1.1e-11	34.1
WP_053882716.1\|138219_139566_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_032695375.1\|139555_140374_-	ABC transporter permease	NA	NA	NA	NA
WP_032695376.1\|140370_140916_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.2e-50	58.4
WP_032695377.1\|140929_141820_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.5e-31	35.7
WP_032695378.1\|141852_142722_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.8e-112	68.8
WP_032695379.1\|142738_143803_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	55.3
WP_001067858.1\|144219_144924_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6

DBSCAN-SWA_2

990574 : 1003757

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|990574_991336_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|991329_991956_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272592.1\|992095_993235_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|993297_994290_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104441.1\|994383_995748_-	GntP family transporter	NA	NA	NA	NA
WP_001136934.1\|995836_996613_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|996617_997256_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590403.1\|997252_998515_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
WP_000847971.1\|998511_999420_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.5
WP_001295181.1\|999615_1000383_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_001141320.1\|1000433_1001090_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	6.6e-51	47.0
WP_001272928.1\|1001195_1003757_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_3

1611834 : 1620143

Enterobacteria_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569361.1\|1611834_1612761_+	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	1.7e-23	30.8
WP_160177405.1\|1612765_1613497_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|1613477_1613585_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|1613644_1614376_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|1614597_1616283_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|1616279_1616999_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|1617045_1617516_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_001373589.1\|1617556_1618018_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.6e-75	98.7
WP_001423058.1\|1618142_1620143_-	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.6

DBSCAN-SWA_4

1822673 : 1861902

Shigella_phage(33.33%)

transposase,integrase

attL 1827935:1827950|attR 1842555:1842570

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001721489.1\|1822673_1823876_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_032176401.1\|1824310_1824625_+	hypothetical protein	NA	NA	NA	NA
WP_032176374.1\|1824650_1825184_+	hypothetical protein	NA	NA	NA	NA
WP_032176373.1\|1825256_1825691_+	DUF2787 domain-containing protein	NA	NA	NA	NA
WP_064578837.1\|1826301_1827120_-	DUF726 domain-containing protein	NA	NA	NA	NA
WP_085947598.1\|1827919_1829082_-\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
1827935:1827950	attL	NA	NA	NA	NA
WP_000280683.1\|1829724_1830051_+	hypothetical protein	NA	NA	NA	NA
WP_160177427.1\|1830099_1832700_-	hypothetical protein	NA	NA	NA	NA
WP_032176546.1\|1832746_1833385_-	hypothetical protein	NA	NA	NA	NA
WP_000281555.1\|1833374_1833575_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032176544.1\|1833725_1834853_-\|integrase	site-specific integrase	A0A221SAN4	Ralstonia_phage	2.6e-15	27.6
WP_032176543.1\|1834996_1836127_-	hypothetical protein	NA	NA	NA	NA
WP_160177428.1\|1836529_1837696_-	hypothetical protein	NA	NA	NA	NA
WP_021536933.1\|1838068_1839592_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.8e-88	38.9
WP_064579010.1\|1839581_1840766_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_063856253.1\|1840762_1841446_+	YecA family protein	NA	NA	NA	NA
WP_024188081.1\|1841468_1843253_+	cold shock domain-containing protein	NA	NA	NA	NA
1842555:1842570	attR	NA	NA	NA	NA
WP_064579009.1\|1843322_1846607_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.6e-65	27.4
WP_024193468.1\|1846603_1847359_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_077883876.1\|1848016_1849468_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_000995974.1\|1849460_1851503_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_112048290.1\|1851689_1857425_+	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_077874999.1\|1857645_1858500_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	3.0e-80	56.2
WP_000537153.1\|1858454_1858781_-\|transposase	transposase	NA	NA	NA	NA
WP_160177429.1\|1859359_1860100_-	hypothetical protein	NA	NA	NA	NA
WP_085949154.1\|1860755_1861902_+\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3

DBSCAN-SWA_5

2324089 : 2409534

Escherichia_phage(34.15%)

lysis,terminase,tRNA,coat,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160177462.1\|2324089_2325298_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SL42	Escherichia_phage	5.0e-206	92.5
WP_016247171.1\|2325829_2326498_-	DUF3313 domain-containing protein	NA	NA	NA	NA
WP_000586732.1\|2326799_2327393_-	tellurite resistance methyltransferase TehB	NA	NA	NA	NA
WP_112921235.1\|2327389_2328382_-	dicarboxylate transporter/tellurite-resistance protein TehA	NA	NA	NA	NA
WP_001234063.1\|2328505_2329486_+	LbetaH domain-containing protein	NA	NA	NA	NA
WP_001491065.1\|2329477_2330017_-	50S ribosomal protein L7/L12-serine acetyltransferase	NA	NA	NA	NA
WP_001296778.1\|2330079_2330304_-	YdcH family protein	NA	NA	NA	NA
WP_000375956.1\|2330443_2332099_-	glucan biosynthesis protein OpgD	NA	NA	NA	NA
WP_160177463.1\|2332323_2333667_-	DUF1338 family protein	NA	NA	NA	NA
WP_160177464.1\|2333883_2334807_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001098531.1\|2334844_2336485_-	methyl-accepting chemotaxis protein Trg	NA	NA	NA	NA
WP_001320773.1\|2336883_2337033_+	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA
WP_000731833.1\|2337104_2337278_-	periplasmic protein	A0A0R6PKG1	Moraxella_phage	4.4e-07	67.4
WP_001307188.1\|2337522_2338053_-	cytochrome b561	A0A0U2QLA7	Escherichia_phage	3.1e-19	44.9
WP_000115937.1\|2339283_2340723_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_001027942.1\|2340919_2341720_-	YdcF family protein	NA	NA	NA	NA
WP_000139565.1\|2341991_2345894_-	ATP-dependent RNA helicase HrpA	A0A1V0SIV3	Klosneuvirus	2.2e-53	29.5
WP_000048951.1\|2346094_2346700_+	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_160177465.1\|2346750_2348067_-	dual specificity protein phosphatase family protein	NA	NA	NA	NA
WP_000431845.1\|2348056_2349814_-	bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000890941.1\|2349829_2350726_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_160177466.1\|2350725_2351331_-	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_000471482.1\|2351501_2353808_-	DUF2773 domain-containing bactofilin	NA	NA	NA	NA
WP_001300734.1\|2355129_2355456_-	YdbL family protein	NA	NA	NA	NA
WP_000698145.1\|2355463_2355649_-	YnbE family lipoprotein	NA	NA	NA	NA
WP_160177467.1\|2355645_2358285_-	YdbH family protein	NA	NA	NA	NA
WP_000762229.1\|2358492_2359482_+	D-lactate dehydrogenase	M1I4S0	Paramecium_bursaria_Chlorella_virus	2.5e-70	44.0
WP_001296048.1\|2359592_2360015_+	heat shock protein HslJ	NA	NA	NA	NA
WP_001295715.1\|2360011_2360278_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_000628243.1\|2360551_2364076_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA
WP_160177468.1\|2365715_2366150_+	universal stress protein UspF	A0A1W6JNV4	Morganella_phage	2.3e-28	52.1
WP_001157925.1\|2366415_2366589_-	hypothetical protein	NA	NA	NA	NA
WP_120795384.1\|2366928_2367042_+	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|2367110_2367344_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000078178.1\|2367660_2368251_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_001351719.1\|2368348_2368924_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.2e-101	94.2
WP_160177469.1\|2368923_2372202_-\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	6.5e-06	58.8
WP_001233121.1\|2372266_2372866_-	Ail/Lom family outer membrane beta-barrel protein	H6WZM8	Escherichia_phage	7.2e-105	93.0
WP_160177470.1\|2372933_2376413_-	DUF1983 domain-containing protein	A5LH43	Enterobacteria_phage	0.0e+00	90.3
WP_000090943.1\|2376473_2377076_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	4.0e-87	84.7
WP_160177471.1\|2377012_2377756_-	Mov34/MPN/PAD-1 family protein	K7PLW1	Enterobacteria_phage	8.9e-145	96.3
WP_001152432.1\|2377761_2378460_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.1e-125	93.5
WP_000024051.1\|2378459_2378798_-\|tail	phage tail protein	H6WZM2	Escherichia_phage	4.0e-28	50.0
WP_160177472.1\|2378790_2382024_-\|tail	phage tail tape measure protein	A0A2H4J9A1	uncultured_Caudovirales_phage	1.1e-111	34.5
WP_001755909.1\|2382189_2382390_-	hypothetical protein	NA	NA	NA	NA
WP_012565075.1\|2382497_2382857_-	hypothetical protein	NA	NA	NA	NA
WP_000094292.1\|2383007_2383970_-	hypothetical protein	A0A059VG08	Pseudomonas_phage	4.5e-56	39.2
WP_000144678.1\|2383996_2384389_-	hypothetical protein	NA	NA	NA	NA
WP_053290124.1\|2384385_2384766_-	hypothetical protein	A0A059VF88	Pseudomonas_phage	7.2e-18	43.6
WP_000524260.1\|2384766_2385150_-	hypothetical protein	A0A0P0I456	Acinetobacter_phage	2.2e-14	39.4
WP_000634214.1\|2385149_2385545_-	hypothetical protein	NA	NA	NA	NA
WP_000908084.1\|2385548_2385725_-	hypothetical protein	G8C7P8	Escherichia_phage	4.7e-12	62.3
WP_053290125.1\|2385767_2386907_-\|coat	P22 coat - protein 5 family protein	G8C7P7	Escherichia_phage	2.2e-158	74.7
WP_000770042.1\|2387005_2387770_-	hypothetical protein	G8C7P6	Escherichia_phage	6.9e-84	64.2
WP_001351715.1\|2387874_2388987_-	hypothetical protein	I6PD76	Cronobacter_phage	4.2e-114	54.5
WP_000763704.1\|2388970_2390377_-	DUF4055 domain-containing protein	G8C7P4	Escherichia_phage	3.0e-186	69.0
WP_000625348.1\|2390379_2391681_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	59.6
WP_000089447.1\|2391661_2392756_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	5.9e-113	80.5
WP_174235731.1\|2392759_2393011_-	hypothetical protein	NA	NA	NA	NA
WP_160177473.1\|2392946_2393879_-	hypothetical protein	A0A1B1INP7	uncultured_Mediterranean_phage	1.4e-83	54.9
WP_001291094.1\|2393871_2394663_-	ParB N-terminal domain-containing protein	R4TG31	Halovirus	2.8e-48	40.2
WP_001097895.1\|2394800_2396258_-	Trk system potassium uptake protein TrkG	NA	NA	NA	NA
WP_001228688.1\|2396454_2396640_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	3.6e-15	96.5
WP_088895425.1\|2397076_2398305_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_085949154.1\|2398621_2399769_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
WP_000166319.1\|2401303_2402113_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	8.8e-106	71.5
WP_001317028.1\|2402169_2402364_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	5.8e-32	96.9
WP_000276809.1\|2402356_2402566_+	double-strand break reduction protein RcbA	A0A0U2QL97	Escherichia_phage	6.1e-27	98.4
WP_000079604.1\|2402644_2402860_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_000040852.1\|2402861_2404097_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	5.5e-240	98.8
WP_001157407.1\|2404148_2405084_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	5.9e-146	98.8
WP_000123737.1\|2405212_2406586_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000387388.1\|2407063_2408047_-	zinc transporter ZntB	NA	NA	NA	NA
WP_000628058.1\|2408301_2409534_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	3.1e-17	39.5

DBSCAN-SWA_6

2992687 : 3043722

Enterobacteria_phage(52.63%)

lysis,portal,terminase,head,integrase,transposase,tail,capsid

attL 2997769:2997785|attR 3047565:3047581

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_113410911.1\|2992687_2994019_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.5e-20	37.1
WP_113410910.1\|2994092_2994677_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.6e-104	94.8
WP_160177539.1\|2994676_2998024_-\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	8.1e-12	36.4
2997769:2997785	attL	NA	NA	NA	NA
WP_044325860.1\|2998088_2998688_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	1.8e-111	99.0
WP_160177541.1\|2998754_3002153_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	0.0e+00	90.0
WP_129546981.1\|3002212_3002845_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	1.9e-95	98.6
WP_024168874.1\|3002781_3003525_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.5e-147	96.8
WP_000847379.1\|3004227_3004557_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_094316449.1\|3004553_3007115_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	98.2
WP_000459458.1\|3007107_3007542_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	1.5e-64	99.2
WP_032185925.1\|3007523_3007946_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.5e-72	99.3
WP_021514938.1\|3007961_3008702_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	4.7e-130	98.0
WP_000683138.1\|3008709_3009105_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	5.0e-70	99.2
WP_001398561.1\|3009101_3009680_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	8.6e-79	97.9
WP_000752960.1\|3009691_3010045_-\|head,tail	head-tail joining protein	A0A2R9YJJ5	Escherichia_phage	7.6e-62	99.1
WP_021514935.1\|3010056_3010452_-	DNA-packaging protein FI	A0A2R9YJP4	Escherichia_phage	3.5e-55	91.7
WP_160177543.1\|3010493_3011519_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	9.9e-187	96.8
WP_136761806.1\|3011594_3012272_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	3.3e-21	46.0
WP_000624622.1\|3012271_3012619_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-46	76.6
WP_160177301.1\|3012638_3014210_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.4e-170	58.7
WP_001338090.1\|3014281_3014614_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	6.5e-55	99.1
WP_000123302.1\|3014623_3015943_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	1.6e-234	98.9
WP_160177546.1\|3015923_3017525_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	2.7e-308	98.7
WP_000198149.1\|3017521_3017728_-	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_160177548.1\|3017724_3019650_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
WP_000453600.1\|3019624_3020170_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	1.1e-94	98.9
WP_000105084.1\|3020558_3020792_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	7.3e-21	94.4
WP_000079508.1\|3020848_3021259_+	DUF1398 family protein	C6ZCX4	Enterobacteria_phage	1.3e-52	76.3
WP_032160581.1\|3021610_3021763_-	hypothetical protein	K7PKL2	Enterobacteria_phage	1.2e-19	95.9
WP_000092273.1\|3021750_3022218_-\|lysis	lysis protein	A0A2D1GLQ7	Escherichia_phage	1.6e-75	96.8
WP_001135261.1\|3022214_3022712_-	lysozyme RrrD	A0A1B5FP97	Escherichia_phage	4.2e-90	97.6
WP_000839582.1\|3022711_3022927_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.2e-33	98.6
WP_016246969.1\|3023114_3023846_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000592546.1\|3024196_3025156_-	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA
WP_000947148.1\|3026542_3027493_-	magnesium/cobalt transporter CorA	NA	NA	NA	NA
WP_072144661.1\|3027862_3028177_+	hypothetical protein	NA	NA	NA	NA
WP_077760937.1\|3028895_3029123_+	lipocalin family protein	A0A1W6JNX6	Morganella_phage	4.0e-16	54.0
WP_016246965.1\|3029278_3029656_-	antitermination protein Q	Q777W5	Enterobacteria_phage	2.1e-54	84.2
WP_000971055.1\|3029741_3029882_-	YlcG family protein	K7PHH3	Enterobacteria_phage	1.1e-08	69.8
WP_001099699.1\|3029878_3030241_-	crossover junction endodeoxyribonuclease RusA	K7PM48	Enterobacteria_phage	2.5e-60	97.4
WP_000774488.1\|3030237_3030528_-	DUF1364 domain-containing protein	K7PGZ6	Enterobacteria_phage	4.3e-47	94.8
WP_000224916.1\|3030520_3030691_-	hypothetical protein	K7P7K0	Enterobacteria_phage	1.5e-12	67.9
WP_001053031.1\|3030690_3031146_-	DNA base-flipping protein YbcN	I6PD71	Cronobacter_phage	3.7e-61	68.2
WP_072097297.1\|3031142_3031244_-	hypothetical protein	NA	NA	NA	NA
WP_085949154.1\|3031542_3032690_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
WP_001224618.1\|3033436_3033931_-	hypothetical protein	NA	NA	NA	NA
WP_000145896.1\|3034077_3034251_-	hypothetical protein	M1FPD5	Enterobacteria_phage	2.3e-19	85.5
WP_024216237.1\|3034247_3034949_-	hypothetical protein	M1FJ72	Enterobacteria_phage	4.6e-127	97.0
WP_096935523.1\|3034945_3035965_-	replication protein	A0A0M5M7Y1	Salmonella_phage	1.3e-109	63.4
WP_001182903.1\|3035961_3036501_-	hypothetical protein	M9NZI6	Enterobacteria_phage	1.2e-61	66.1
WP_001067458.1\|3036570_3036801_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	1.5e-21	68.0
WP_000858975.1\|3036905_3037595_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	2.8e-92	75.0
WP_000233576.1\|3038190_3038397_+	phage encoded cell division inhibitor protein	K7P6H3	Enterobacteria_phage	3.2e-28	85.3
WP_000995416.1\|3038473_3038770_+	host-nuclease inhibitor protein Gam	A0A1I9LJN1	Stx_converting_phage	4.7e-49	99.0
WP_000100847.1\|3038775_3039561_+	phage recombination protein Bet	A0A1I9LJN0	Stx_converting_phage	6.3e-149	100.0
WP_000186848.1\|3039557_3040238_+	YqaJ viral recombinase family protein	A0A0P0ZCD4	Stx2-converting_phage	1.6e-132	100.0
WP_000149532.1\|3040234_3040417_+	DUF1317 domain-containing protein	A0A0N7CHV0	Escherichia_phage	2.8e-28	96.7
WP_000548531.1\|3040389_3040581_+	DUF1382 family protein	A0A0P0ZC67	Stx2-converting_phage	7.3e-27	100.0
WP_001386642.1\|3040591_3040873_+	cell division protein ZapA	A0A0P0ZE02	Stx2-converting_phage	5.5e-47	98.9
WP_000763386.1\|3040971_3041193_+	TraR/DksA family transcriptional regulator	A0A1I9LJM6	Stx_converting_phage	6.4e-35	98.6
WP_000120065.1\|3041403_3042006_-	hypothetical protein	NA	NA	NA	NA
WP_000545745.1\|3042248_3042416_+	hypothetical protein	A5VWB7	Enterobacteria_phage	2.9e-27	98.2
WP_001303849.1\|3042455_3042674_+	excisionase	Q77WA4	Escherichia_phage	3.7e-35	100.0
WP_000533645.1\|3042651_3043722_+\|integrase	tyrosine-type recombinase/integrase	K7P6P6	Enterobacteria_phage	1.5e-201	99.7
3047565:3047581	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3485523 : 3577482

Enterobacteria_phage(35.59%)

lysis,portal,terminase,integrase,tail,holin,transposase,protease

attL 3505794:3505810|attR 3574928:3574944

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000131044.1\|3485523_3487557_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3487685_3488273_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089110.1\|3488286_3489759_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159094.1\|3489772_3491443_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|3491655_3492324_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3492566_3493262_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023927.1\|3493254_3494682_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|3494692_3495412_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_000339594.1\|3495938_3496793_-	DNA-binding transcriptional regulator RclR	NA	NA	NA	NA
WP_160177600.1\|3497018_3498308_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	3.1e-105	47.0
WP_088895425.1\|3498349_3499577_+\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	1.3e-177	99.3
WP_000474077.1\|3499788_3500025_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001299021.1\|3500036_3500630_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000621009.1\|3501220_3502072_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000020219.1\|3502211_3506468_-	intimin-like adhesin FdeC	NA	NA	NA	NA
3505794:3505810	attL	NA	NA	NA	NA
WP_000662258.1\|3507582_3507684_+	hypothetical protein	NA	NA	NA	NA
WP_000803998.1\|3508047_3508311_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000866436.1\|3508310_3508451_+	50S ribosomal protein L36	NA	NA	NA	NA
WP_001147279.1\|3508485_3508713_-	hypothetical protein	NA	NA	NA	NA
WP_001301257.1\|3509535_3510078_+	ECP biosynthesis operon DNA-binding transcriptional regulator EcpR	NA	NA	NA	NA
WP_085949154.1\|3510494_3511642_-\|transposase	IS3-like element ISEc52 family transposase	Q716C2	Shigella_phage	2.4e-173	96.3
WP_001272156.1\|3512047_3512272_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000072039.1\|3512390_3513245_+	hypothetical protein	NA	NA	NA	NA
WP_001543512.1\|3513271_3513970_+	recombinase family protein	NA	NA	NA	NA
WP_000860996.1\|3514241_3514868_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_160177679.1\|3514958_3515690_-	hypothetical protein	NA	NA	NA	NA
WP_160177602.1\|3517343_3518390_+	ferric ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-33	37.7
WP_000081352.1\|3518498_3519431_-	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_001373486.1\|3519417_3520821_-	S-methylmethionine permease	NA	NA	NA	NA
WP_001065555.1\|3522999_3523863_+	GTPase family protein	NA	NA	NA	NA
WP_000197388.1\|3523954_3524776_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	1.8e-45	38.7
WP_160177604.1\|3524992_3525694_+	WYL domain-containing protein	NA	NA	NA	NA
WP_001144031.1\|3525734_3525971_+	hypothetical protein	NA	NA	NA	NA
WP_000649865.1\|3525970_3526414_+	hypothetical protein	NA	NA	NA	NA
WP_001385283.1\|3526436_3526904_+	hypothetical protein	NA	NA	NA	NA
WP_000211838.1\|3527317_3527776_+	antirestriction protein	A9J566	Pseudomonas_phage	2.0e-14	32.8
WP_160177606.1\|3527791_3528268_+	DNA repair protein RadC	NA	NA	NA	NA
WP_000691994.1\|3528276_3528498_+	DUF987 domain-containing protein	NA	NA	NA	NA
WP_000070396.1\|3528516_3528834_+	type IV toxin-antitoxin system antitoxin YafW	NA	NA	NA	NA
WP_000854680.1\|3528854_3529196_+	type IV toxin-antitoxin system toxin YkfI	NA	NA	NA	NA
WP_137541354.1\|3530112_3530856_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_000355482.1\|3531679_3532453_+	hypothetical protein	G9IA57	Pseudomonas_phage	4.1e-36	37.7
WP_001709920.1\|3532522_3533107_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	5.6e-102	95.3
WP_160177607.1\|3533106_3536454_-\|tail	prophage tail fiber N-terminal domain-containing protein	X2KTY7	Enterobacteria_phage	1.8e-11	35.5
WP_032259927.1\|3536518_3537118_-	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	2.6e-110	99.0
WP_160177609.1\|3537184_3540583_-	DUF1983 domain-containing protein	K7PKJ2	Enterobacteria_phage	0.0e+00	90.0
WP_137564876.1\|3540643_3541291_-\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	7.3e-111	96.7
WP_160177611.1\|3541188_3541932_-	C40 family peptidase	K7PLW1	Enterobacteria_phage	1.8e-150	98.0
WP_137541357.1\|3541937_3542636_-\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.1e-133	99.1
WP_000447253.1\|3542645_3542975_-\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_160177613.1\|3542974_3546040_-\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	98.8
WP_001161009.1\|3546011_3546341_-\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_074501130.1\|3546349_3546736_-\|tail	phage minor tail protein G	K7PLV8	Enterobacteria_phage	2.3e-64	98.4
WP_061321174.1\|3546796_3547540_-\|tail	phage tail protein	A5LH35	Enterobacteria_phage	2.1e-130	97.6
WP_001079410.1\|3547550_3547952_-\|tail	tail protein	A0A291AWY2	Escherichia_phage	2.4e-72	99.2
WP_000677120.1\|3547948_3548539_-\|tail	phage tail protein	A5LH33	Enterobacteria_phage	7.2e-81	80.1
WP_001283153.1\|3548550_3548826_-	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_001097050.1\|3548818_3549142_-	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_137541359.1\|3549228_3551256_-\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.7
WP_000985939.1\|3551200_3552709_-\|portal	phage portal protein	K7PJP3	Enterobacteria_phage	1.0e-288	99.4
WP_001072973.1\|3552708_3552921_-	hypothetical protein	A5LH28	Enterobacteria_phage	7.1e-31	98.6
WP_000934132.1\|3552917_3555020_-\|terminase	phage terminase large subunit family protein	A0A291AWY5	Escherichia_phage	0.0e+00	99.7
WP_000373425.1\|3555019_3555514_-	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_061316105.1\|3555967_3556330_-	DNA-binding protein	A5LH85	Enterobacteria_phage	1.3e-64	98.3
WP_001228685.1\|3556413_3556599_-	hypothetical protein	A0A0P0ZE50	Stx2-converting_phage	6.4e-20	80.3
WP_000075159.1\|3556815_3557313_-	lysozyme RrrD	A5LH83	Enterobacteria_phage	1.3e-91	100.0
WP_000839596.1\|3557312_3557528_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_061316108.1\|3557594_3558647_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	1.4e-207	99.7
WP_000917724.1\|3558797_3559001_-	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000217632.1\|3559224_3559650_-	hypothetical protein	A0A291AWZ9	Escherichia_phage	3.6e-74	100.0
WP_001047112.1\|3559930_3560683_-	antitermination protein	Q8SBE4	Shigella_phage	6.9e-137	98.8
WP_001564461.1\|3560696_3561686_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.2e-194	99.7
WP_001061445.1\|3561693_3562503_-	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	4.0e-151	99.6
WP_000767113.1\|3562522_3562912_-	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_000210170.1\|3562908_3563235_-	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_000066917.1\|3563231_3563885_-	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	1.9e-127	99.5
WP_072282201.1\|3563884_3564379_-	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	2.4e-85	96.9
WP_160177615.1\|3564375_3565317_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.5e-152	99.4
WP_001188051.1\|3565306_3565486_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.7e-15	70.4
WP_000514170.1\|3565661_3566246_-	hypothetical protein	A0A1C9II13	Salmonella_phage	6.5e-58	61.4
WP_000098316.1\|3566274_3566538_-	helix-turn-helix domain-containing protein	H6WRX5	Salmonella_phage	1.1e-09	51.7
WP_001410974.1\|3566644_3567349_+	helix-turn-helix domain-containing protein	G8C7U1	Escherichia_phage	1.3e-68	58.7
WP_000606712.1\|3567583_3568669_+	ParA family protein	H2BD62	Pseudomonas_phage	1.2e-60	39.0
WP_000135680.1\|3569601_3569964_+	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_000081280.1\|3570029_3570854_+	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	99.6
WP_000008185.1\|3570981_3571518_+	5'-deoxynucleotidase	K7PKJ9	Enterobacteria_phage	1.4e-99	98.9
WP_001242726.1\|3571508_3571871_+	phage protein	U5P092	Shigella_phage	1.2e-65	97.5
WP_000206732.1\|3571870_3572176_+	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
WP_000051887.1\|3572402_3573566_+\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_000893266.1\|3573770_3575024_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	5.8e-96	47.2
3574928:3574944	attR	NA	NA	NA	NA
WP_001285288.1\|3575035_3576139_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_021559201.1\|3576426_3577482_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.2e-116	60.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP047574

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 2041

Macacine_betaherpesvirus(100.0%)

integrase

attL 196:210|attR 7663:7677

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
196:210	attL	NA	NA	NA	NA
WP_044078474.1\|1300_2041_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	7.0e-25	58.6
WP_044078474.1\|1300_2041_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	7.0e-25	58.6
7663:7677	attR	NA	NA	NA	NA

DBSCAN-SWA_2

11329 : 26499

Enterobacteria_phage(54.55%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_165369776.1\|11329_12543_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.1e-166	97.6
WP_001076427.1\|13430_14291_+	RepB family plasmid replication initiator protein	Q71TL8	Escherichia_phage	4.7e-158	100.0
WP_039022244.1\|14690_15896_+	AAA family ATPase	Q1MVJ3	Enterobacteria_phage	9.7e-226	99.8
WP_023338075.1\|15892_16858_+	ParB/RepB/Spo0J family partition protein	Q1MVJ4	Enterobacteria_phage	6.3e-167	98.8
WP_089541817.1\|17688_18916_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.7e-170	95.7
WP_023338078.1\|20226_21816_+	hypothetical protein	A0A077SLN8	Escherichia_phage	1.2e-303	98.9
WP_152924350.1\|21825_22641_+	hypothetical protein	Q1MVJ7	Enterobacteria_phage	1.3e-109	96.7
WP_029396071.1\|22676_23258_+	hypothetical protein	Q1MVJ8	Enterobacteria_phage	5.9e-104	100.0
WP_039022248.1\|23269_23779_+	hypothetical protein	Q1MVJ9	Enterobacteria_phage	1.1e-90	98.8
WP_001300563.1\|23938_25051_+\|transposase	IS4-like element IS421 family transposase	NA	NA	NA	NA
WP_001352007.1\|25244_25400_-	type I toxin-antitoxin system toxin HokD	A0A1I9LJU7	Stx_converting_phage	4.0e-15	90.2
WP_133166674.1\|25704_26499_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A077SLN2	Escherichia_phage	8.9e-127	100.0

DBSCAN-SWA_3

29783 : 45479

Salmonella_phage(50.0%)

transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049100257.1\|29783_32723_+	AAA family ATPase	A0A2K9L5A2	Tupanvirus	9.9e-22	23.8
WP_073503524.1\|32719_34144_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_031942297.1\|34330_35299_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.5e-184	99.1
WP_032213821.1\|35526_37524_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	7.4e-21	25.9
WP_160177694.1\|38401_39316_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.2e-160	89.8
WP_160177695.1\|39357_39699_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_152924361.1\|39762_40764_+	hypothetical protein	NA	NA	NA	NA
WP_160177696.1\|40834_40999_+	hypothetical protein	NA	NA	NA	NA
WP_000654811.1\|41039_42008_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-172	91.6
WP_152924359.1\|43350_43557_-	hypothetical protein	NA	NA	NA	NA
WP_162001251.1\|43611_43770_-	hypothetical protein	NA	NA	NA	NA
WP_165369776.1\|44265_45479_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.1e-166	97.6

DBSCAN-SWA_4

50803 : 61793

Salmonella_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001323889.1\|50803_52381_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	1.2e-95	99.4
WP_001161490.1\|52690_53251_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	1.1e-59	100.0
WP_001138014.1\|53254_56221_+\|transposase	Tn3-like element TnAs1 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	100.0
WP_044078478.1\|56571_59193_+	histidinol-phosphatase	A0A1B1IUG5	uncultured_Mediterranean_phage	2.7e-18	23.6
WP_000422741.1\|59376_59802_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-48	99.0
WP_000624722.1\|59798_60149_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_152924344.1\|60179_61793_+\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.5e-181	63.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage