CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047649	Klebsiella pneumoniae strain 158590 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	0	0	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047649_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047649_1

4593194-4593288

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047649_1

>merge|NZ_CP047649|1|4593194-4593288|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP047649|1|1|4593194-4593288|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047649.1\|WP_002888345.1\|4591740_4593105_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP047649.1\|WP_002888347.1\|4591021_4591561_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP047649.1\|WP_002888349.1\|4584823_4587181_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP047649.1\|WP_002888348.1\|4590287_4590947_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP047649.1\|WP_002888321.1\|4602733_4603582_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP047649.1\|WP_002888353.1\|4583952_4584648_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP047649.1\|WP_002888368.1\|4580592_4582302_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP047649.1\|WP_002888323.1\|4602351_4602729_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP047649.1\|WP_002888324.1\|4601527_4602349_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP047649.1\|WP_002888340.1\|4593429_4595055_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP047649.1\|WP_002888332.1\|4595775_4596603_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP047649.1\|WP_002888357.1\|4582312_4583815_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP047649.1\|WP_002888337.1\|4595044_4595743_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP047649.1\|WP_004151368.1\|4587368_4590275_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP047649.1\|WP_002888320.1\|4603837_4604317_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP047649.1\|WP_004147026.1\|4596846_4599195_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP047649.1\|WP_002888373.1\|4578513_4579281_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP047649.1\|WP_002888327.1\|4600541_4601531_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP047649.1\|WP_002888370.1\|4579409_4580255_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP047649.1\|WP_002888329.1\|4599249_4600536_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758

Protein	Function_ID	Function_description	E-value
NZ_CP047649.1\|WP_002888345.1\|4591740_4593105_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP047649.1\|WP_002888347.1\|4591021_4591561_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP047649.1\|WP_002888349.1\|4584823_4587181_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP047649.1\|WP_002888348.1\|4590287_4590947_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP047649.1\|WP_002888321.1\|4602733_4603582_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP047649.1\|WP_002888353.1\|4583952_4584648_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP047649.1\|WP_002888368.1\|4580592_4582302_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP047649.1\|WP_002888323.1\|4602351_4602729_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP047649.1\|WP_002888324.1\|4601527_4602349_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP047649.1\|WP_002888340.1\|4593429_4595055_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP047649.1\|WP_002888332.1\|4595775_4596603_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP047649.1\|WP_002888357.1\|4582312_4583815_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP047649.1\|WP_002888337.1\|4595044_4595743_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP047649.1\|WP_004151368.1\|4587368_4590275_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP047649.1\|WP_002888320.1\|4603837_4604317_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP047649.1\|WP_004147026.1\|4596846_4599195_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP047649.1\|WP_002888373.1\|4578513_4579281_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP047649.1\|WP_002888327.1\|4600541_4601531_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP047649.1\|WP_002888370.1\|4579409_4580255_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP047649.1\|WP_002888329.1\|4599249_4600536_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0

>NZ_CP047649.1|WP_002888345.1|4591740_4593105_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP047649.1|WP_002888347.1|4591021_4591561_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP047649.1|WP_002888348.1|4590287_4590947_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP047649.1|WP_004151368.1|4587368_4590275_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP047649.1|WP_002888349.1|4584823_4587181_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP047649.1|WP_002888353.1|4583952_4584648_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP047649.1|WP_002888357.1|4582312_4583815_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP047649.1|WP_002888368.1|4580592_4582302_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP047649.1|WP_002888370.1|4579409_4580255_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP047649.1|WP_002888373.1|4578513_4579281_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP047649.1|WP_002888340.1|4593429_4595055_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP047649.1|WP_002888337.1|4595044_4595743_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP047649.1|WP_002888332.1|4595775_4596603_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP047649.1|WP_004147026.1|4596846_4599195_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP047649.1|WP_002888329.1|4599249_4600536_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP047649.1|WP_002888327.1|4600541_4601531_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP047649.1|WP_002888324.1|4601527_4602349_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP047649.1|WP_002888323.1|4602351_4602729_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP047649.1|WP_002888321.1|4602733_4603582_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP047649.1|WP_002888320.1|4603837_4604317_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

449452 : 482710

uncultured_Caudovirales_phage(73.33%)

tRNA,protease,head,terminase,capsid,portal,tail,integrase

attL 467060:467077|attR 483055:483072

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002919147.1\|449452_450400_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
WP_002919144.1\|450414_450924_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
WP_002919139.1\|451052_452177_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_002919137.1\|452148_452622_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_004145330.1\|452647_453190_+	hypothetical protein	NA	NA	NA	NA
WP_002919132.1\|453194_453767_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_002919126.1\|453770_454589_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_002919125.1\|454585_454843_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_002919123.1\|454818_455373_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002919103.1\|461168_461390_-	membrane protein	NA	NA	NA	NA
WP_002919102.1\|461683_464794_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_002919101.1\|464806_465946_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004150972.1\|466324_466975_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
467060:467077	attL	NA	NA	NA	NA
WP_004150971.1\|467250_468477_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
WP_004150970.1\|468569_469511_+	hypothetical protein	NA	NA	NA	NA
WP_001547839.1\|469692_469977_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004150969.1\|469987_470767_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
WP_106918304.1\|471218_471488_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_001549752.1\|471480_471669_+	hypothetical protein	NA	NA	NA	NA
WP_004150967.1\|471661_471976_+	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|471972_472341_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_001549749.1\|472337_472703_+	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|472702_474838_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_004150964.1\|475180_475516_+	hypothetical protein	NA	NA	NA	NA
WP_004150963.1\|475564_476077_-	hypothetical protein	NA	NA	NA	NA
WP_001549743.1\|476340_477507_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_001547826.1\|477558_478119_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_004150962.1\|478120_479362_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_004150961.1\|479358_479694_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_001547824.1\|479690_479990_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_004150959.1\|479989_480433_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	2.8e-77	91.8
WP_000113647.1\|480708_481065_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150955.1\|481048_482710_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
483055:483072	attR	NA	NA	NA	NA

DBSCAN-SWA_2

1171818 : 1257917

Salmonella_phage(68.63%)

tRNA,coat,lysis,head,terminase,transposase,portal,capsid,tail,plate,integrase

attL 1185572:1185591|attR 1235018:1235037

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002914765.1\|1171818_1174446_+\|tRNA	alanine--tRNA ligase	A0A2K9L1X7	Tupanvirus	4.9e-81	38.6
WP_000906486.1\|1174809_1174995_+	carbon storage regulator CsrA	A0A2I7RT00	Vibrio_phage	4.9e-12	66.7
WP_002914359.1\|1176516_1176831_+	BON domain-containing protein	NA	NA	NA	NA
WP_002914357.1\|1176956_1177523_+	fructose-1-phosphate/6-phosphogluconate phosphatase	NA	NA	NA	NA
WP_002914355.1\|1177519_1177948_+	DedA family protein	NA	NA	NA	NA
WP_002914353.1\|1178014_1179571_+	glutamate--cysteine ligase	NA	NA	NA	NA
WP_002914351.1\|1179727_1180243_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_002914345.1\|1180295_1181063_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002914344.1\|1181041_1182718_-	2-isopropylmalate synthase	NA	NA	NA	NA
WP_002914342.1\|1182854_1184393_-	multidrug efflux MFS transporter permease subunit EmrB	NA	NA	NA	NA
WP_002914339.1\|1184408_1185581_-	multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA	NA	NA	NA
1185572:1185591	attL	NA	NA	NA	NA
WP_002914337.1\|1185706_1186237_-	transcriptional repressor MprA	NA	NA	NA	NA
WP_002914335.1\|1186327_1186663_-	L-valine transporter subunit YgaH	NA	NA	NA	NA
WP_002914333.1\|1186652_1187399_-	AzlC family ABC transporter permease	NA	NA	NA	NA
WP_002914330.1\|1187576_1188575_-	glycine betaine/L-proline ABC transporter substrate-binding protein ProX	NA	NA	NA	NA
WP_004151038.1\|1188653_1189721_-	glycine betaine/L-proline ABC transporter permease ProW	NA	NA	NA	NA
WP_002914328.1\|1189713_1190916_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	1.2e-26	37.8
WP_002914327.1\|1191272_1192235_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A0M4S3B4	Mycobacterium_phage	1.5e-131	72.2
WP_002914325.1\|1192245_1194387_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	2.5e-184	46.4
WP_002914321.1\|1194359_1194770_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_002914320.1\|1194766_1195012_-	glutaredoxin-like protein NrdH	A0A0M7REK7	Lactobacillus_phage	5.5e-11	41.1
WP_004151037.1\|1195195_1195627_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_004149442.1\|1195715_1197068_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_002914293.1\|1197211_1197559_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_002914291.1\|1197708_1198071_+	YgaC family protein	NA	NA	NA	NA
WP_002914289.1\|1198156_1198606_-	L-alanine exporter AlaE	NA	NA	NA	NA
WP_002914287.1\|1199334_1199736_+	DNA-binding protein StpA	NA	NA	NA	NA
WP_002914284.1\|1199808_1199988_-	hypothetical protein	NA	NA	NA	NA
WP_002914281.1\|1200193_1201096_+	lipid A hydroxylase LpxO	H8ZJK8	Ostreococcus_tauri_virus	2.6e-37	40.2
WP_002914279.1\|1201076_1201622_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_002914277.1\|1201629_1201929_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002914274.1\|1202004_1202610_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA
WP_004145715.1\|1202713_1203622_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004151036.1\|1203704_1205492_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_004151035.1\|1205755_1207276_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_002914266.1\|1207977_1208559_+	fimbrial protein	NA	NA	NA	NA
WP_000019473.1\|1208773_1209754_-\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_062955148.1\|1209799_1210798_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	2.2e-183	94.5
WP_004151019.1\|1210800_1211430_-	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	1.4e-61	54.5
WP_001397669.1\|1211552_1211795_+	hypothetical protein	A0A1S6KZZ6	Salmonella_phage	4.0e-38	98.8
WP_004151018.1\|1211827_1212337_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	1.1e-77	85.8
WP_004151017.1\|1212344_1212545_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	4.5e-19	68.8
WP_004144796.1\|1212508_1212847_+	DUF5347 domain-containing protein	A0A218M4I7	Erwinia_phage	6.2e-29	58.0
WP_004151016.1\|1212914_1213148_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	6.0e-31	90.9
WP_004151014.1\|1213147_1213375_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	5.1e-35	92.0
WP_004151013.1\|1213371_1214223_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	2.2e-115	75.4
WP_004151012.1\|1214219_1216604_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	87.9
WP_004152765.1\|1217084_1218569_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004151011.1\|1218676_1218865_+	hypothetical protein	A0A1S6L006	Salmonella_phage	2.2e-23	90.3
WP_004151010.1\|1218876_1219110_+	DinI family protein	A0A0M4S6H1	Salmonella_phage	2.0e-34	96.1
WP_004151009.1\|1219205_1219889_-	hypothetical protein	NA	NA	NA	NA
WP_004151008.1\|1219875_1220955_-	hypothetical protein	NA	NA	NA	NA
WP_004151007.1\|1220954_1221956_-	hypothetical protein	NA	NA	NA	NA
WP_024940854.1\|1222477_1222747_+	hypothetical protein	D2IZW1	Enterococcus_phage	1.4e-15	41.3
WP_004151006.1\|1222803_1223847_-\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	3.1e-172	85.6
WP_019405037.1\|1223846_1225610_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	91.8
WP_004151004.1\|1225750_1226584_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	4.4e-100	77.6
WP_004151003.1\|1226600_1227653_+\|capsid	phage major capsid protein, P2 family	A0A1S6KZZ3	Salmonella_phage	6.8e-175	91.0
WP_004134644.1\|1227656_1228310_+\|terminase	terminase endonuclease subunit	A0A1S6KZX1	Salmonella_phage	1.9e-90	80.0
WP_004151002.1\|1228405_1228870_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.5e-73	85.7
WP_004151001.1\|1228869_1229073_+\|tail	tail protein X	E5G6M9	Salmonella_phage	9.8e-30	89.6
WP_004134639.1\|1229076_1229292_+	hypothetical protein	E5G6N0	Salmonella_phage	6.1e-30	88.7
WP_004151000.1\|1229272_1229782_+	lysozyme	E5G6N1	Salmonella_phage	1.6e-81	85.2
WP_004150999.1\|1229786_1230170_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	1.9e-18	45.4
WP_004150998.1\|1230166_1230595_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	7.1e-54	82.5
WP_004150997.1\|1230690_1231113_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	8.2e-63	83.2
WP_004150996.1\|1231105_1231552_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.5e-54	72.3
WP_004150995.1\|1231574_1232441_-	hypothetical protein	NA	NA	NA	NA
WP_004150994.1\|1232535_1233108_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	1.4e-76	70.8
WP_004150993.1\|1233104_1233467_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	8.4e-48	85.6
WP_004150992.1\|1233453_1234362_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	1.9e-109	68.9
WP_004152935.1\|1234354_1235026_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	3.2e-61	58.9
WP_004150990.1\|1235027_1236977_+\|coat	spore coat protein CotH	Q6QI97	Burkholderia_phage	1.0e-06	38.9
1235018:1235037	attR	NA	NA	NA	NA
WP_004200602.1\|1236986_1238105_+	hypothetical protein	A0A248XD67	Klebsiella_phage	4.4e-55	38.0
WP_004150988.1\|1238156_1239230_+\|tail	phage tail protein	A0A1S6KZZ8	Salmonella_phage	6.6e-40	53.6
WP_004150987.1\|1239378_1240551_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	3.4e-207	91.5
WP_004150986.1\|1240560_1241076_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.4e-80	84.2
WP_004150985.1\|1241128_1241428_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	8.2e-33	78.0
WP_002896220.1\|1241442_1241562_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_004150984.1\|1241554_1244185_+\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	8.9e-115	41.9
WP_004150983.1\|1244181_1244667_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	5.2e-61	80.1
WP_004150982.1\|1244663_1245758_+	phage late control D family protein	E5G6Q3	Salmonella_phage	2.4e-170	83.6
WP_004150981.1\|1245824_1246043_+	positive regulator of late gene transcription	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004150980.1\|1246070_1246448_-	hypothetical protein	NA	NA	NA	NA
WP_002914164.1\|1247051_1247534_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
WP_004188817.1\|1247644_1248121_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914161.1\|1248110_1248401_+	RnfH family protein	NA	NA	NA	NA
WP_002914160.1\|1248467_1248809_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914159.1\|1248956_1250618_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002914158.1\|1250704_1251583_-	NAD(+) kinase	NA	NA	NA	NA
WP_002914155.1\|1251707_1252298_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_004149392.1\|1252417_1253704_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914153.1\|1253723_1254515_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_002914152.1\|1254678_1256043_+	signal recognition particle protein	NA	NA	NA	NA
WP_002914149.1\|1256302_1256551_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_004150977.1\|1256569_1257118_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914147.1\|1257149_1257917_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA

DBSCAN-SWA_3

1354924 : 1415172

Salmonella_phage(27.03%)

tRNA,protease,transposase,holin,integrase

attL 1363628:1363645|attR 1417920:1417937

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004149335.1\|1354924_1356199_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_002913890.1\|1356233_1356854_+	YfgM family protein	NA	NA	NA	NA
WP_002913889.1\|1356864_1358043_+	outer membrane protein assembly factor BamB	NA	NA	NA	NA
WP_002913888.1\|1358156_1359635_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_004151982.1\|1359752_1360832_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_004144303.1\|1360881_1361100_+	hypothetical protein	NA	NA	NA	NA
WP_004151981.1\|1361083_1362475_-	exodeoxyribonuclease VII large subunit	A0A2H4UVM9	Bodo_saltans_virus	6.3e-35	33.0
WP_004151980.1\|1362633_1364100_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.2e-87	38.7
1363628:1363645	attL	NA	NA	NA	NA
WP_004151979.1\|1364167_1365745_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_062955102.1\|1365936_1367187_+\|integrase	tyrosine-type recombinase/integrase	A0A1X9TCT6	Enterobacter_phage	5.8e-205	84.4
WP_004197356.1\|1367368_1367962_-	MT-A70 family protein	T1SA14	Salmonella_phage	6.3e-109	91.9
WP_062955103.1\|1367958_1368621_-	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.2e-47	46.6
WP_048264082.1\|1368617_1368776_-	DUF1317 family protein	T1SAR0	Salmonella_phage	1.1e-17	78.8
WP_009485475.1\|1368768_1369062_-	PerC family transcriptional regulator	T1S9J5	Salmonella_phage	4.0e-32	71.1
WP_062955104.1\|1369171_1369420_-	AlpA family phage regulatory protein	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	4.9e-31	76.8
WP_062955105.1\|1369468_1370350_-	recombinase RecT	T1SBJ5	Salmonella_phage	8.9e-136	84.3
WP_062955106.1\|1370346_1371168_-	exodeoxyribonuclease VIII	A0A193GYK2	Enterobacter_phage	1.8e-130	80.2
WP_004164029.1\|1371164_1371464_-	hypothetical protein	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	2.1e-20	54.5
WP_004144290.1\|1371830_1372412_-	helix-turn-helix transcriptional regulator	Q858D7	Salmonella_phage	7.1e-65	64.3
WP_004152538.1\|1372566_1372800_+	hypothetical protein	T1SAR5	Salmonella_phage	9.2e-24	66.2
WP_004152537.1\|1372946_1373156_+	hypothetical protein	A0A193GYW4	Enterobacter_phage	1.8e-26	78.3
WP_004207253.1\|1373155_1373923_+	hypothetical protein	A0A193GZ86	Enterobacter_phage	8.9e-140	91.4
WP_032418532.1\|1373919_1374705_+	replication protein	A0A193GYX1	Enterobacter_phage	3.7e-133	87.7
WP_048328152.1\|1374824_1375172_+	DUF1064 domain-containing protein	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	6.5e-50	82.6
WP_062955107.1\|1375364_1375775_+	hypothetical protein	A0A2P1MXC5	Escherichia_phage	4.3e-16	45.1
WP_032441402.1\|1375758_1375950_+	hypothetical protein	NA	NA	NA	NA
WP_032441401.1\|1375946_1376591_+	hypothetical protein	Q1MVG0	Enterobacteria_phage	8.0e-110	79.3
WP_072200041.1\|1376884_1377352_+	hypothetical protein	A0A2R2Z312	Escherichia_phage	1.3e-37	51.7
WP_029602865.1\|1377351_1377645_+	hypothetical protein	Q6UAT9	Klebsiella_phage	2.7e-44	86.6
WP_050491799.1\|1377641_1378262_+	hypothetical protein	Q1MVF7	Enterobacteria_phage	1.0e-29	40.7
WP_032441458.1\|1378261_1378465_+	hypothetical protein	NA	NA	NA	NA
WP_023339258.1\|1378457_1378796_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.8e-44	80.0
WP_004152765.1\|1378892_1380377_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_062955131.1\|1383588_1383852_+	hypothetical protein	NA	NA	NA	NA
WP_153233543.1\|1383892_1385158_-	hypothetical protein	NA	NA	NA	NA
WP_073547080.1\|1385139_1386120_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.5e-184	98.5
WP_000608644.1\|1386988_1388251_-\|transposase	IS1380-like element ISEc9 family transposase	A0A1B0VDR3	Salmonella_phage	1.3e-39	100.0
WP_077265603.1\|1389359_1390676_+	right-handed parallel beta-helix repeat-containing protein	A0A0K2FI18	Enterobacter_phage	2.3e-34	32.3
WP_062955010.1\|1390762_1391167_+	hypothetical protein	T1SA79	Salmonella_phage	8.7e-54	81.1
WP_023339240.1\|1391153_1391459_+\|holin	phage holin family protein	A0A193GYK3	Enterobacter_phage	2.7e-39	81.4
WP_062955009.1\|1391448_1392078_+	glycoside hydrolase family 19 protein	Q858F0	Salmonella_phage	1.8e-90	76.9
WP_062955008.1\|1392074_1392575_+	DUF2514 domain-containing protein	Q858E9	Salmonella_phage	1.3e-59	76.9
WP_004152009.1\|1392761_1394630_-	sulfatase-like hydrolase/transferase	A0A2P0VMN7	Tetraselmis_virus	2.6e-07	22.6
WP_004162150.1\|1394613_1395792_-	anaerobic sulfatase maturase	NA	NA	NA	NA
WP_002913847.1\|1396085_1397318_-	MFS transporter	NA	NA	NA	NA
WP_002913846.1\|1397415_1398303_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002913843.1\|1398399_1398591_-	DUF2633 family protein	G9L6F2	Escherichia_phage	3.3e-19	79.3
WP_002913841.1\|1398943_1401172_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA
WP_002913839.1\|1401225_1402758_-	exopolyphosphatase	NA	NA	NA	NA
WP_002913838.1\|1402761_1404822_-	polyphosphate kinase 1	NA	NA	NA	NA
WP_004152007.1\|1405002_1405644_-	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-28	41.1
WP_002913836.1\|1405640_1406678_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	8.2e-72	44.5
WP_002913833.1\|1406941_1407835_+	beta-glucoside kinase	NA	NA	NA	NA
WP_002913829.1\|1407844_1409278_+	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_002913827.1\|1409495_1410122_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_002913824.1\|1410217_1411504_+	uracil permease	Q9KX94	Enterobacteria_phage	1.9e-65	38.1
WP_020947395.1\|1411602_1412304_+	DnaA inactivator Hda	NA	NA	NA	NA
WP_002913812.1\|1412300_1413212_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	3.5e-74	58.8
WP_002913810.1\|1413339_1413699_-	arsenate reductase (glutaredoxin)	NA	NA	NA	NA
WP_002913807.1\|1413708_1415172_-\|protease	beta-barrel assembly-enhancing protease	NA	NA	NA	NA
1417920:1417937	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1724827 : 1731733

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1724827_1725691_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004899467.1\|1725701_1726475_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_002912636.1\|1726716_1727610_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1727855_1729217_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1729535_1730258_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_062955084.1\|1730254_1731733_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_5

1772468 : 1788214

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_062955058.1\|1772468_1773875_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	3.6e-38	28.7
WP_062955056.1\|1774098_1775163_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.4e-105	54.7
WP_062956182.1\|1775176_1776046_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.4e-111	67.4
WP_048996045.1\|1776077_1776968_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_004175260.1\|1776982_1777537_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_000704907.1\|1777716_1778883_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.7
WP_016947628.1\|1779311_1779431_-	small membrane protein	NA	NA	NA	NA
WP_062955151.1\|1779831_1780836_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	4.0e-31	29.2
WP_073547076.1\|1781675_1782740_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.6e-105	55.0
WP_062956182.1\|1782753_1783623_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	3.4e-111	67.4
WP_048996045.1\|1783654_1784545_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.7e-28	34.2
WP_015958693.1\|1784559_1785114_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_015958692.1\|1785200_1786031_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_062955124.1\|1786059_1786893_+	ABC transporter permease	NA	NA	NA	NA
WP_062955125.1\|1786882_1788214_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.9e-15	29.1

DBSCAN-SWA_6

1930507 : 1956930

Pectobacterium_phage(33.33%)

head,integrase,tail

attL 1920933:1920948|attR 1938372:1938387

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1920933:1920948	attL	NA	NA	NA	NA
WP_015365913.1\|1930507_1931524_-\|integrase	tyrosine-type recombinase/integrase	H9C152	Pectobacterium_phage	3.7e-125	64.2
WP_015365914.1\|1931507_1931753_-	DUF4224 domain-containing protein	H9C153	Pectobacterium_phage	2.8e-07	41.4
WP_015365915.1\|1931962_1932148_-	hypothetical protein	NA	NA	NA	NA
WP_064145722.1\|1932149_1932716_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.6e-53	63.0
WP_146962167.1\|1932712_1934893_-	hypothetical protein	H9C157	Pectobacterium_phage	1.9e-94	32.6
WP_050597398.1\|1934937_1935171_-	hypothetical protein	NA	NA	NA	NA
WP_094819180.1\|1935894_1936350_-	helix-turn-helix domain-containing protein	A0A0U2QW76	Escherichia_phage	1.2e-35	54.3
WP_000364674.1\|1936458_1936692_+	helix-turn-helix transcriptional regulator	A0A0U2S629	Escherichia_phage	2.9e-09	44.4
WP_082236706.1\|1936754_1937201_+	hypothetical protein	H9C162	Pectobacterium_phage	1.0e-26	51.4
WP_015365921.1\|1937284_1937443_+	hypothetical protein	NA	NA	NA	NA
WP_064167418.1\|1937460_1938429_+	helix-turn-helix domain-containing protein	H9C164	Pectobacterium_phage	1.6e-37	73.3
1938372:1938387	attR	NA	NA	NA	NA
WP_094819211.1\|1938437_1939832_+	replicative DNA helicase	I6R0N4	Salmonella_phage	4.9e-104	47.4
WP_114499494.1\|1939870_1940539_+	hypothetical protein	NA	NA	NA	NA
WP_064164989.1\|1940542_1940776_+	hypothetical protein	NA	NA	NA	NA
WP_157668072.1\|1940772_1940943_+	hypothetical protein	NA	NA	NA	NA
WP_146962169.1\|1940939_1941530_+	adenine methylase	A0A0F6TJC3	Escherichia_coli_O157_typing_phage	1.1e-94	83.9
WP_015365928.1\|1941532_1941763_+	hypothetical protein	A0A2H4JCC5	uncultured_Caudovirales_phage	3.8e-06	37.3
WP_094819183.1\|1941759_1942377_+	hypothetical protein	A0A2H4JEM6	uncultured_Caudovirales_phage	2.3e-05	24.9
WP_094819212.1\|1942404_1942665_+	hypothetical protein	NA	NA	NA	NA
WP_094819184.1\|1942661_1944623_+	DNA cytosine methyltransferase	H9C171	Pectobacterium_phage	8.2e-206	55.9
WP_094819185.1\|1944622_1944961_+	hypothetical protein	A0A193GYX4	Enterobacter_phage	1.5e-46	82.0
WP_064408055.1\|1945143_1945335_+	hypothetical protein	NA	NA	NA	NA
WP_094819186.1\|1945403_1945997_+	DUF1367 family protein	H9C173	Pectobacterium_phage	3.2e-81	72.1
WP_094819187.1\|1945986_1946310_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	4.0e-25	52.0
WP_042945555.1\|1946297_1946654_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_042945553.1\|1946650_1946944_+	hypothetical protein	G8C7W3	Escherichia_phage	7.5e-31	72.2
WP_094819188.1\|1946976_1947261_+	hypothetical protein	NA	NA	NA	NA
WP_094819189.1\|1947321_1947552_+	hypothetical protein	NA	NA	NA	NA
WP_094819190.1\|1947535_1947796_+	hypothetical protein	NA	NA	NA	NA
WP_020947865.1\|1947802_1948255_+	hypothetical protein	A3EYX3	Salmonella_phage	1.5e-49	66.4
WP_160192557.1\|1948339_1949734_+	hypothetical protein	A0A1B1IPE1	uncultured_Mediterranean_phage	5.3e-66	41.4
WP_094819193.1\|1949733_1951398_+\|head,tail	phage head-tail adapter protein	A0A221SAN2	Ralstonia_phage	1.3e-103	39.1
WP_029503969.1\|1951400_1951724_+	hypothetical protein	NA	NA	NA	NA
WP_094819194.1\|1951710_1952469_+	hypothetical protein	M1I7K2	Pelagibacter_phage	4.8e-05	24.0
WP_042945539.1\|1952479_1953475_+	phage protein	W6MW28	Pseudomonas_phage	1.0e-103	59.9
WP_042945537.1\|1953513_1953987_+	hypothetical protein	A0A193GYT9	Enterobacter_phage	2.3e-13	39.2
WP_042945535.1\|1954048_1954654_+	hypothetical protein	NA	NA	NA	NA
WP_094819196.1\|1954653_1956930_+	hypothetical protein	A0A221SAL7	Ralstonia_phage	3.8e-69	27.5

DBSCAN-SWA_7

1966585 : 1973633

Klebsiella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094819201.1\|1966585_1966801_+	hypothetical protein	A5LH82	Enterobacteria_phage	5.2e-13	61.0
WP_094819202.1\|1966802_1967342_+	lysozyme	H6WRZ4	Salmonella_phage	7.0e-83	79.8
WP_094819203.1\|1967338_1967869_+	hypothetical protein	K7PHH7	Enterobacteria_phage	5.0e-33	47.3
WP_094819204.1\|1967865_1968024_+	DUF1378 family protein	NA	NA	NA	NA
WP_141223324.1\|1968106_1970521_+	hypothetical protein	A0A0U3DL17	Klebsiella_phage	3.6e-110	45.6
WP_094819206.1\|1970517_1970772_+	hypothetical protein	NA	NA	NA	NA
WP_094819207.1\|1970808_1971069_-	hypothetical protein	NA	NA	NA	NA
WP_146965280.1\|1971080_1972910_-	hypothetical protein	A0A0U3C9T3	Klebsiella_phage	1.6e-158	47.8
WP_094819209.1\|1973084_1973633_+	recombinase family protein	A0A286S1P7	Klebsiella_phage	1.6e-87	90.0

DBSCAN-SWA_8

2819123 : 2830010

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151613.1\|2819123_2822231_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004151612.1\|2822285_2823551_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2823581_2824670_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_002904006.1\|2824756_2825017_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_004176269.1\|2825314_2826175_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002210513.1\|2826195_2826957_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004151610.1\|2827217_2828120_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_004151609.1\|2828131_2829397_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_002210516.1\|2829389_2830010_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_9

3058706 : 3097172

uncultured_Caudovirales_phage(34.04%)

terminase,integrase

attL 3088285:3088299|attR 3094294:3094308

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152576.1\|3058706_3059573_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
WP_004152575.1\|3059572_3060346_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152574.1\|3060342_3061539_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152573.1\|3061538_3061892_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152572.1\|3061893_3062547_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152571.1\|3062600_3063167_-	hypothetical protein	NA	NA	NA	NA
WP_004199301.1\|3063209_3063392_-	hypothetical protein	NA	NA	NA	NA
WP_004152570.1\|3063441_3063783_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004152569.1\|3063782_3064805_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152568.1\|3064807_3065110_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152567.1\|3065110_3065710_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152566.1\|3065709_3067713_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152565.1\|3067702_3067855_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152564.1\|3067890_3068316_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004199809.1\|3068319_3068760_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152177.1\|3068770_3069916_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152176.1\|3069919_3070360_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_001116156.1\|3070454_3070841_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_000834982.1\|3070840_3071347_-	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|3071343_3071763_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000725700.1\|3071731_3072013_-	hypothetical protein	NA	NA	NA	NA
WP_001132269.1\|3072052_3072994_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000528476.1\|3073005_3073500_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_004199270.1\|3073503_3074706_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_004152174.1\|3074757_3075306_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004152173.1\|3075361_3076813_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152172.1\|3077050_3078451_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152171.1\|3078401_3079154_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152170.1\|3079255_3079576_-	hypothetical protein	NA	NA	NA	NA
WP_004153952.1\|3079810_3080200_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152169.1\|3080196_3080727_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004146526.1\|3080729_3080978_-	hypothetical protein	NA	NA	NA	NA
WP_004152167.1\|3081383_3082166_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004198239.1\|3082162_3082639_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004198233.1\|3082635_3083598_-	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198228.1\|3083599_3085258_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004152162.1\|3085834_3086056_-	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004152161.1\|3086153_3086822_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152160.1\|3086992_3087307_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152159.1\|3087299_3087488_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152158.1\|3087657_3088023_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152157.1\|3088015_3088270_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004177208.1\|3088241_3088460_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
3088285:3088299	attL	NA	NA	NA	NA
WP_004152156.1\|3088456_3088882_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004152155.1\|3088878_3089073_+	hypothetical protein	NA	NA	NA	NA
WP_004152154.1\|3089069_3089897_+	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152153.1\|3090001_3090520_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
WP_004154298.1\|3090525_3091236_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152151.1\|3091225_3091450_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004152150.1\|3091446_3091659_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152149.1\|3091655_3092135_+	hypothetical protein	NA	NA	NA	NA
WP_004152148.1\|3092313_3092556_+	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152147.1\|3092536_3093718_-\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_016197745.1\|3093914_3094463_+	DJ-1/PfpI family protein	NA	NA	NA	NA
3094294:3094308	attR	NA	NA	NA	NA
WP_004152145.1\|3094661_3096194_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_004152144.1\|3096410_3097172_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_10

3130105 : 3158646

Enterobacteria_phage(35.48%)

integrase,transposase,holin

attL 3129887:3129902|attR 3155952:3155967

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3129887:3129902	attL	NA	NA	NA	NA
WP_002901815.1\|3130105_3130777_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6
WP_071531199.1\|3130963_3131791_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
WP_002901813.1\|3131866_3133132_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.6e-208	82.7
WP_002901812.1\|3133133_3133553_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
WP_004152765.1\|3133632_3135117_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004152776.1\|3136014_3136437_-	hypothetical protein	K7P834	Enterobacteria_phage	3.6e-26	45.3
WP_001067855.1\|3137029_3137734_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_062955100.1\|3137770_3138058_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.4e-36	95.4
WP_004218565.1\|3138054_3138594_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
WP_024940884.1\|3138590_3138890_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_022644626.1\|3139368_3140415_-\|transposase	IS481-like element ISKpn28 family transposase	A0A0M3LR35	Mannheimia_phage	1.3e-05	21.9
WP_004232548.1\|3140640_3141330_-	antiterminator-like protein	I6PDF8	Cronobacter_phage	2.1e-55	53.1
WP_004218534.1\|3141329_3141470_-	YlcG family protein	NA	NA	NA	NA
WP_004218533.1\|3141466_3142105_-	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
WP_004218532.1\|3142097_3142766_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
WP_004243010.1\|3142762_3142930_-	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
WP_004218531.1\|3142910_3143378_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
WP_004218530.1\|3143898_3144927_+	hypothetical protein	NA	NA	NA	NA
WP_004196831.1\|3145134_3145380_-	hypothetical protein	NA	NA	NA	NA
WP_004218528.1\|3145435_3145738_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004201118.1\|3145734_3146583_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
WP_004201117.1\|3146579_3147440_-	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
WP_001548453.1\|3147525_3147747_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004201115.1\|3147787_3148015_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_004201113.1\|3148126_3148825_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
WP_019405077.1\|3148847_3148967_+	hypothetical protein	NA	NA	NA	NA
WP_004201109.1\|3149112_3150189_+	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
WP_004201108.1\|3150270_3150474_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
WP_004135674.1\|3150902_3151097_+	hypothetical protein	NA	NA	NA	NA
WP_004201105.1\|3151185_3151470_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
WP_004201103.1\|3151485_3152331_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
WP_088224434.1\|3152327_3152615_+	hypothetical protein	NA	NA	NA	NA
WP_004201102.1\|3152616_3153297_+	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
WP_004151898.1\|3153293_3153722_+	hypothetical protein	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
WP_004151899.1\|3153718_3154381_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
WP_004153574.1\|3154588_3155776_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
WP_004151901.1\|3155952_3156843_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3155952:3155967	attR	NA	NA	NA	NA
WP_004140266.1\|3156842_3157835_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004140269.1\|3157836_3158646_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_11

3286318 : 3375025

Klebsiella_phage(44.19%)

tRNA,lysis,head,terminase,transposase,capsid,portal,tail,integrase

attL 3313121:3313135|attR 3372836:3372850

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002901088.1\|3286318_3286819_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002901080.1\|3286935_3287382_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_002901073.1\|3287365_3288157_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004150777.1\|3288258_3289443_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140471.1\|3289474_3290167_-	CTP synthase	NA	NA	NA	NA
WP_004150778.1\|3290312_3290822_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004150779.1\|3290808_3291165_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_004150780.1\|3291154_3291394_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004150781.1\|3291694_3292708_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.4e-12	29.0
WP_004150782.1\|3292765_3292867_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_099119317.1\|3292866_3292941_+	protein YoaJ	NA	NA	NA	NA
WP_004140488.1\|3293058_3293184_+	hypothetical protein	NA	NA	NA	NA
WP_004140489.1\|3293243_3293507_-	DUF2534 family protein	NA	NA	NA	NA
WP_004150783.1\|3293637_3294276_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004148038.1\|3294365_3295280_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150784.1\|3295941_3296985_-	type II asparaginase	NA	NA	NA	NA
WP_004150785.1\|3297287_3298496_+	HD domain-containing protein	NA	NA	NA	NA
WP_004150787.1\|3298569_3300354_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150788.1\|3300360_3301251_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004140497.1\|3301371_3302880_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150790.1\|3303190_3303877_-	EAL domain-containing protein	NA	NA	NA	NA
WP_153233540.1\|3304326_3304515_+	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3304493_3305126_-	DNA-binding protein	NA	NA	NA	NA
WP_004140506.1\|3305692_3305890_+	hypothetical protein	NA	NA	NA	NA
WP_004140509.1\|3306005_3307016_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004150793.1\|3307012_3308419_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140512.1\|3308474_3309362_-	manganese catalase family protein	NA	NA	NA	NA
WP_004140514.1\|3309378_3309885_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150794.1\|3309911_3310406_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150795.1\|3310496_3310682_-	general stress protein	NA	NA	NA	NA
WP_004140529.1\|3311303_3312497_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004140530.1\|3312609_3312837_+	DUF1272 domain-containing protein	NA	NA	NA	NA
3313121:3313135	attL	NA	NA	NA	NA
WP_004150797.1\|3313273_3313597_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004150798.1\|3313589_3313982_+	amino acid-binding protein	NA	NA	NA	NA
WP_004150799.1\|3313978_3314692_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004892953.1\|3314964_3315117_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_023328083.1\|3315271_3316768_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	1.4e-125	63.7
WP_062955111.1\|3316836_3329541_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	47.1
WP_023328085.1\|3329603_3330197_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	8.0e-80	76.6
WP_047666390.1\|3330223_3330646_-	hypothetical protein	J9Q806	Salmonella_phage	5.9e-29	50.0
WP_047666389.1\|3330687_3331398_-	peptidase P60	Q6UAW4	Klebsiella_phage	1.9e-136	90.3
WP_023328087.1\|3331399_3332155_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	4.6e-125	80.5
WP_023328088.1\|3332151_3332490_-\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-57	88.4
WP_023328089.1\|3332489_3335825_-\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	0.0e+00	88.3
WP_014228914.1\|3336057_3336423_-\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	1.6e-51	89.3
WP_023328090.1\|3336480_3336942_-	hypothetical protein	Q6UAX0	Klebsiella_phage	7.8e-67	83.7
WP_023328091.1\|3336973_3337375_-	hypothetical protein	Q6UAX1	Klebsiella_phage	2.3e-62	94.0
WP_017880258.1\|3337371_3337761_-	hypothetical protein	Q6UAX2	Klebsiella_phage	9.6e-58	86.0
WP_023328092.1\|3337741_3338080_-\|head,tail	head-tail adaptor protein	Q6UAX3	Klebsiella_phage	2.8e-53	90.2
WP_020317538.1\|3338076_3338394_-\|head,tail	phage gp6-like head-tail connector protein	Q6UAX4	Klebsiella_phage	1.5e-45	89.8
WP_049010370.1\|3338374_3338635_-	hypothetical protein	Q6UAX5	Klebsiella_phage	7.4e-22	60.5
WP_023328094.1\|3338693_3339980_-\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	9.8e-216	89.0
WP_014907815.1\|3340057_3340978_-	S49 family peptidase	Q6UAX7	Klebsiella_phage	9.6e-149	88.2
WP_023279520.1\|3341014_3342274_-\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	1.8e-222	89.8
WP_017898992.1\|3342273_3342453_-	hypothetical protein	Q6UAX9	Klebsiella_phage	3.1e-11	57.6
WP_021462603.1\|3342446_3344168_-\|terminase	terminase large subunit	Q7Y413	Yersinia_phage	1.5e-190	57.4
WP_012542168.1\|3344167_3344602_-\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	9.4e-30	61.9
WP_014907818.1\|3344850_3345282_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.8e-41	61.6
WP_023297386.1\|3345278_3345602_-	hypothetical protein	NA	NA	NA	NA
WP_032428746.1\|3345553_3345916_-	HNH endonuclease	Q6UAS2	Klebsiella_phage	1.2e-57	83.3
WP_032749552.1\|3346242_3346467_+	hypothetical protein	NA	NA	NA	NA
WP_049115059.1\|3346505_3346943_-	hypothetical protein	NA	NA	NA	NA
WP_016160650.1\|3347892_3348243_-	hypothetical protein	R9TPM9	Aeromonas_phage	7.9e-11	38.1
WP_032432826.1\|3348239_3348737_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.1e-77	84.6
WP_016160648.1\|3348736_3348952_-\|lysis	phage S lysis protein	A5LH82	Enterobacteria_phage	2.7e-30	88.7
WP_004147999.1\|3349869_3350019_+	small membrane protein	NA	NA	NA	NA
WP_004147997.1\|3350756_3350960_+	hypothetical protein	NA	NA	NA	NA
WP_025861432.1\|3351203_3351806_-	hypothetical protein	H9C175	Pectobacterium_phage	1.1e-76	68.6
WP_062955112.1\|3351822_3352854_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.7e-96	49.6
WP_025861428.1\|3353053_3353446_-	DNA-binding protein	K7PHB4	Enterobacterial_phage	8.0e-12	36.6
WP_077255782.1\|3353486_3353777_-	hypothetical protein	H6WRY6	Salmonella_phage	8.0e-17	56.9
WP_025368263.1\|3353788_3354022_-	DinI family protein	K7PM44	Enterobacteria_phage	3.7e-25	71.1
WP_004152765.1\|3354100_3355585_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_062954975.1\|3356425_3357787_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
WP_062954976.1\|3357960_3358674_-	hypothetical protein	NA	NA	NA	NA
WP_062954989.1\|3359025_3359895_+	hypothetical protein	NA	NA	NA	NA
WP_062954977.1\|3359983_3361375_+	hypothetical protein	NA	NA	NA	NA
WP_032443841.1\|3361723_3362164_-	hypothetical protein	NA	NA	NA	NA
WP_047667474.1\|3362177_3362642_-	replication protein	A0A0U2JGJ0	Escherichia_phage	4.1e-63	72.2
WP_077265602.1\|3362634_3363639_-	DNA-binding protein	A0A0U2RT81	Escherichia_phage	1.0e-31	40.0
WP_046622349.1\|3363698_3364253_-	hypothetical protein	NA	NA	NA	NA
WP_071561166.1\|3364255_3364480_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.3e-19	62.5
WP_077257742.1\|3364568_3365006_+	helix-turn-helix domain-containing protein	H6WRX4	Salmonella_phage	1.3e-39	62.2
WP_040234937.1\|3365327_3365642_-	hypothetical protein	NA	NA	NA	NA
WP_023279538.1\|3366032_3366227_+	DUF1482 family protein	NA	NA	NA	NA
WP_014228879.1\|3366269_3366614_+	transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|3367632_3368337_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012542206.1\|3369774_3370020_+	excisionase	NA	NA	NA	NA
WP_032418030.1\|3370000_3371128_+\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	4.4e-119	58.4
WP_004150800.1\|3371245_3372496_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_004150801.1\|3372736_3373387_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
3372836:3372850	attR	NA	NA	NA	NA
WP_004150802.1\|3373403_3373862_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3373918_3375025_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_12

3591368 : 3686103

Salmonella_phage(55.93%)

tRNA,protease,lysis,head,terminase,transposase,plate,tail,capsid,portal,integrase

attL 3647478:3647496|attR 3686178:3686196

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002898139.1\|3591368_3592661_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
WP_002898137.1\|3592751_3594095_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
WP_002898132.1\|3594103_3594715_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_004150846.1\|3594837_3599091_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.2e-88	49.2
WP_000228469.1\|3599226_3599721_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_004141839.1\|3600226_3601222_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.3e-62	44.0
WP_002898017.1\|3601336_3603103_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
WP_004150847.1\|3603103_3604825_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3604869_3605571_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3605924_3606143_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3606263_3608543_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3608573_3608891_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3609216_3609438_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896440.1\|3611438_3612554_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_002896437.1\|3612700_3614359_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_002896434.1\|3614778_3615474_+	aquaporin Z	NA	NA	NA	NA
WP_004147773.1\|3615589_3616489_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_002896412.1\|3616632_3618285_+	hydroxylamine reductase	NA	NA	NA	NA
WP_002896410.1\|3618295_3619264_+	NADH oxidoreductase	NA	NA	NA	NA
WP_002896408.1\|3619475_3619910_-	DoxX family protein	NA	NA	NA	NA
WP_002896406.1\|3620061_3621780_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_002896404.1\|3621818_3622820_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_002896401.1\|3622830_3624273_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896399.1\|3624360_3625374_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_002896397.1\|3625370_3626201_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_004150851.1\|3626232_3627372_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|3628718_3629423_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_032419144.1\|3629588_3630317_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896390.1\|3630337_3631069_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896386.1\|3631075_3631792_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004150852.1\|3631791_3632460_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896384.1\|3632643_3633375_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896382.1\|3633417_3634890_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_002896380.1\|3634886_3635603_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
WP_002896378.1\|3635681_3636809_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896376.1\|3636850_3637339_-	DUF2593 family protein	NA	NA	NA	NA
WP_002896372.1\|3637396_3638242_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_002896371.1\|3638238_3639192_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896370.1\|3639202_3640336_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896368.1\|3640499_3641612_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896365.1\|3641960_3642440_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_002896363.1\|3642528_3643431_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
WP_002896354.1\|3644252_3644540_-	YbjC family protein	NA	NA	NA	NA
WP_002896352.1\|3644742_3645006_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896351.1\|3645012_3645396_-	membrane protein	NA	NA	NA	NA
WP_004179131.1\|3645662_3647348_+	aspartate:alanine antiporter	NA	NA	NA	NA
3647478:3647496	attL	NA	NA	NA	NA
WP_000972391.1\|3647567_3647786_-	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_002896225.1\|3647877_3648978_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_002896224.1\|3648974_3649460_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896222.1\|3649456_3652084_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896220.1\|3652076_3652196_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896204.1\|3652210_3652510_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896201.1\|3652562_3653078_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896193.1\|3653087_3654260_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896191.1\|3654398_3655475_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896188.1\|3655504_3655708_-	hypothetical protein	NA	NA	NA	NA
WP_002896186.1\|3655704_3656436_-	hypothetical protein	NA	NA	NA	NA
WP_004152882.1\|3656439_3659391_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_004150856.1\|3659392_3659992_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_002896182.1\|3659984_3660893_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_032441567.1\|3660879_3661242_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	4.9e-48	83.9
WP_002896177.1\|3661238_3661811_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_000019473.1\|3662035_3663016_+\|transposase	IS5-like element ISKpn26 family transposase	Q38213	Escherichia_phage	8.9e-185	99.1
WP_048255583.1\|3663129_3663798_+	hypothetical protein	NA	NA	NA	NA
WP_002896175.1\|3663794_3664241_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_002896172.1\|3664233_3664665_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896168.1\|3664760_3665189_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896163.1\|3665185_3665569_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896161.1\|3665573_3666083_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896158.1\|3666063_3666279_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896155.1\|3666282_3666486_-\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896151.1\|3666485_3666950_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_000059191.1\|3667045_3667696_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002895972.1\|3667699_3668758_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.1e-180	93.1
WP_002895967.1\|3668774_3669608_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_004150858.1\|3669750_3671517_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.0
WP_002895959.1\|3671516_3672542_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004199124.1\|3672603_3674346_-	AIPR family protein	NA	NA	NA	NA
WP_000700647.1\|3674621_3675299_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|3675413_3675647_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|3675657_3675846_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_004150862.1\|3675999_3678414_-	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	97.5
WP_004150863.1\|3678410_3679268_-	DNA adenine methylase	E5G6L8	Salmonella_phage	2.0e-156	95.4
WP_000752622.1\|3679264_3679492_-	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-36	98.7
WP_004150864.1\|3679491_3679725_-	DUF2732 family protein	E5G6L6	Salmonella_phage	4.1e-32	96.1
WP_000963473.1\|3679792_3680134_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	4.6e-56	99.1
WP_000956179.1\|3680097_3680298_-	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	1.6e-32	97.0
WP_000460893.1\|3680305_3680815_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	5.8e-87	98.8
WP_000188448.1\|3680847_3681069_-	hypothetical protein	NA	NA	NA	NA
WP_087530321.1\|3681214_3682093_+	phage repressor protein CI	A0A1S6KZZ7	Salmonella_phage	6.6e-30	39.4
WP_004150866.1\|3682104_3683049_+	hypothetical protein	NA	NA	NA	NA
WP_004152765.1\|3683147_3684632_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004151720.1\|3685050_3686103_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3686178:3686196	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4329897 : 4341550

Enterobacteria_phage(70.0%)

integrase

attL 4330347:4330361|attR 4353403:4353417

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004144574.1\|4329897_4331001_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4330347:4330361	attL	NA	NA	NA	NA
WP_002889940.1\|4331011_4332265_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_002889938.1\|4332617_4333808_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_004152029.1\|4333795_4334746_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_004152979.1\|4334745_4335171_+	hypothetical protein	NA	NA	NA	NA
WP_004152202.1\|4335738_4336305_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152203.1\|4336322_4336568_-	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_062956184.1\|4336564_4337302_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.9e-70	59.4
WP_002889915.1\|4337843_4338110_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_024940872.1\|4338106_4338664_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889911.1\|4338660_4338888_+	hypothetical protein	NA	NA	NA	NA
WP_002889897.1\|4338884_4339205_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889890.1\|4339216_4341550_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4353403:4353417	attR	NA	NA	NA	NA

DBSCAN-SWA_14

4810997 : 4819810

Enterobacteria_phage(83.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152207.1\|4810997_4813331_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	83.9
WP_004152206.1\|4813345_4813666_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_004152205.1\|4813662_4813890_-	hypothetical protein	NA	NA	NA	NA
WP_004153681.1\|4813886_4814435_-	ash family protein	Q7M2A7	Enterobacteria_phage	1.1e-30	69.4
WP_004152204.1\|4815258_4815996_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	1.1e-70	59.4
WP_004152203.1\|4815992_4816238_+	hypothetical protein	Q7M294	Enterobacteria_phage	5.5e-19	56.8
WP_004152202.1\|4816255_4816822_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	9.7e-59	63.8
WP_004152201.1\|4817562_4818642_+	hypothetical protein	NA	NA	NA	NA
WP_000019445.1\|4818829_4819810_+\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage