CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP047660	Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence	0 crisprs	NA	0	6
NZ_CP047658	Escherichia coli strain LD39-1 chromosome, complete genome	11 crisprs	cas3,csa3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,DEDDh,c2c9_V-U4,DinG,RT,WYL	26	8
NZ_CP047659	Escherichia coli strain LD39-1 plasmid pLD39-1-MCR1, complete sequence	0 crisprs	csa3	0	2
NZ_CP047661	Escherichia coli strain LD39-1 plasmid pLD39-1-6kb, complete sequence	0 crisprs	NA	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 67025

Escherichia_phage(21.43%)

integrase,transposase,bacteriocin

attL 29108:29167|attR 59083:60414

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001066939.1\|1300_2041_-\|integrase	site-specific integrase	I3WFA4	Macacine_betaherpesvirus	7.0e-25	58.6
WP_089629747.1\|2589_3636_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_089590645.1\|3754_5044_+	autotransporter strand-loop-strand O-heptosyltransferase	NA	NA	NA	NA
WP_160183282.1\|5040_9300_+	autotransporter adhesin AIDA-I	A0A2L1IV18	Escherichia_phage	1.3e-67	31.2
WP_001298859.1\|10458_12000_+\|transposase	IS21-like element ISEc12 family transposase	K4I413	Acidithiobacillus_phage	1.7e-129	46.4
WP_001016257.1\|12014_12761_+	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.0e-55	48.5
WP_160183283.1\|13398_13980_-	lipopolysaccharide core heptose(II)-phosphate phosphatase	A0A2L1IV13	Escherichia_phage	7.9e-32	73.9
WP_160183284.1\|16122_17124_+	hypothetical protein	NA	NA	NA	NA
WP_160183297.1\|17908_20269_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA
WP_160183285.1\|20272_22957_+	autotransporter domain-containing protein	NA	NA	NA	NA
WP_160183286.1\|24407_25259_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_160183287.1\|25448_26129_-	EAL domain-containing protein	NA	NA	NA	NA
WP_160183288.1\|26275_27118_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_160183289.1\|27746_28858_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.6e-36	34.4
29108:29167	attL	NA	NA	NA	NA
WP_085948316.1\|29153_30426_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_160183290.1\|30437_31616_+	autotransporter strand-loop-strand O-heptosyltransferase	NA	NA	NA	NA
WP_160183291.1\|31612_35137_+	autotransporter adhesin AIDA-I	A0A2L1IV18	Escherichia_phage	1.1e-67	31.2
WP_001543753.1\|36183_36498_+	hypothetical protein	NA	NA	NA	NA
WP_085947598.1\|36525_37687_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	4.0e-51	40.6
WP_001061054.1\|38476_39283_-\|bacteriocin	bacteriocin family protein	NA	NA	NA	NA
WP_001493054.1\|39284_40340_-	Dyp-type peroxidase	S4VXK8	Pandoravirus	7.9e-22	28.0
WP_000362423.1\|40433_41210_-	NAD-dependent formate dehydrogenase	A0A1B1IVB5	uncultured_Mediterranean_phage	2.0e-14	29.3
WP_112022434.1\|42117_42693_+	recombinase family protein	A0A219YA40	Aeromonas_phage	1.0e-23	36.6
WP_000798353.1\|42891_43290_+	hypothetical protein	NA	NA	NA	NA
WP_000716854.1\|43309_44263_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000668513.1\|44333_45110_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_000427619.1\|45709_46714_+\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_000264477.1\|47693_48281_+	hypothetical protein	NA	NA	NA	NA
WP_112022435.1\|48321_49245_-\|transposase	IS5 family transposase	Q1MVF0	Enterobacteria_phage	3.0e-166	93.2
WP_000379665.1\|49322_49619_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001088744.1\|49924_50485_-	hypothetical protein	NA	NA	NA	NA
WP_001446018.1\|50582_50915_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001214166.1\|51117_51552_-	hypothetical protein	NA	NA	NA	NA
WP_000716059.1\|51551_53918_-	hypothetical protein	NA	NA	NA	NA
WP_000086929.1\|53914_55465_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_001059072.1\|55448_56324_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_160183292.1\|57135_58482_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_085948316.1\|59128_60401_+\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	2.8e-170	95.7
WP_089590652.1\|61524_62130_+	YfdX family protein	NA	NA	NA	NA
59083:60414	attR	NA	NA	NA	NA
WP_160183293.1\|65978_67025_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

75760 : 76501

Xanthomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_089590496.1\|75760_76501_-	type-F conjugative transfer system pilin acetylase TraX	A0A077JBM8	Xanthomonas_phage	3.7e-10	30.5

DBSCAN-SWA_3

100679 : 100901

Vibrio_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001278695.1\|100679_100901_-	conjugal transfer protein TraR	A2I309	Vibrio_virus	4.4e-07	40.8

DBSCAN-SWA_4

108860 : 109682

Yersinia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001234475.1\|108860_109682_-	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	5.7e-44	38.2

DBSCAN-SWA_5

113725 : 116579

Emiliania_huxleyi_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160183296.1\|113725_115684_-	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	1.2e-20	29.4
WP_000005990.1\|115749_115983_-	DUF905 domain-containing protein	NA	NA	NA	NA
WP_000290799.1\|116039_116579_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	3.8e-44	73.0

DBSCAN-SWA_6

120363 : 132113

Macacine_betaherpesvirus(66.67%)

integrase

attL 119085:119099|attR 132748:132762

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
119085:119099	attL	NA	NA	NA	NA
WP_000085939.1\|120363_121047_-	DNA methylase	A0A2I7RE86	Vibrio_phage	1.9e-29	37.4
WP_010891292.1\|121123_121429_-	hypothetical protein	NA	NA	NA	NA
WP_028985975.1\|121432_121870_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_001443029.1\|121851_122358_-	DUF1281 domain-containing protein	NA	NA	NA	NA
WP_000817031.1\|123243_124215_-	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	4.8e-175	100.0
WP_000772446.1\|124214_125381_-	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.0e-229	100.0
WP_000852146.1\|125968_126724_-	replication initiation protein RepE	I3WF20	Macacine_betaherpesvirus	3.8e-143	100.0
WP_000016982.1\|127445_128252_-\|integrase	phage integrase family protein	I3WFA4	Macacine_betaherpesvirus	5.8e-57	100.0
WP_001159868.1\|128252_128558_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA
WP_000813634.1\|128559_128778_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA
WP_000283688.1\|129491_132113_+	histidinol-phosphatase	A0A1B1IUG5	uncultured_Mediterranean_phage	3.5e-18	23.6
132748:132762	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP047658

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047658_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_1

1052389-1053150

Orphan

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCGN	CRT

12 spacers

The CRISPR arrays of NZ_CP047658_1

>merge|NZ_CP047658|1|1052389-1053150|PILER-CR,CRISPRCasFinder,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGTTCCGCGACCCGGCGATAAGGGAAGATGGGTGGAGTTCCCCGCGCCAGCGGGGATAAACCGTAACGACAGAGGGATTCGGCAGCGAAGAGGATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTAGTTTCGGCAGTCCAGTGCCTCGTTACGTGAGTTCCCCGCGCCAGCGGGGATAAACCGATAGAACGGGACGAGATTTTTAAACAATGGCTGAGTTCCCCGCGCCAGCGGGGATAAACCGCAATCTGAGCCAGACGCGACGAATAAAAGCATGAGTTCCCCGCGCCAGCGGGGATAAACCGTTGACGTTGATTTTGTTCGTTATGTTGCCAGCCGAGTTCCCCGCGCCAGCGGGGATAAACCGCTCTGATTCATCGGCGGCGATACTGTCATCACGAGTTCCCCGCGCCAGCGGGGATAAACCGGAAAAACAAATAGATGGATAGCTCGATATCATGAGTTCCCCGCGCCAGCGGGGATAAACCGCGGCTTATTGCTCTTGCCGACGGATTACAGTGGAGTTCCCCGCGCCAGCGGGGATAAACCGAGCGCGCGCGGGCTACTGCACTCGGTGATAACGAGTTCCCCGCGCCAGCGGGGATAAACCGCCGAGCATTATATCCTGTGCGTCGTTCATTTAGAGTTCCCCGCGCCAGCGGGGATAAACCGCCAGAAAACATGAAAAAACTTTGGGAGGGGATGAGTTCCCATAAGCGCTAACTTAAGGGTT

>NZ_CP047658|1|1|1052389-1053089|PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCGCGACCCGGCGATAAGGGAAGATGGGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAACGACAGAGGGATTCGGCAGCGAAGAGGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTAGTTTCGGCAGTCCAGTGCCTCGTTACGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATAGAACGGGACGAGATTTTTAAACAATGGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CAATCTGAGCCAGACGCGACGAATAAAAGCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGTTGATTTTGTTCGTTATGTTGCCAGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCATCGGCGGCGATACTGTCATCAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAAAACAAATAGATGGATAGCTCGATATCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCTTATTGCTCTTGCCGACGGATTACAGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGCGCGGGCTACTGCACTCGGTGATAAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGCATTATATCCTGTGCGTCGTTCATTTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG

>NZ_CP047658|1|1|1052389-1053090|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCGCGACCCGGCGATAAGGGAAGATGGGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAACGACAGAGGGATTCGGCAGCGAAGAGGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTAGTTTCGGCAGTCCAGTGCCTCGTTACGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATAGAACGGGACGAGATTTTTAAACAATGGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CAATCTGAGCCAGACGCGACGAATAAAAGCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGTTGATTTTGTTCGTTATGTTGCCAGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCATCGGCGGCGATACTGTCATCAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAAAACAAATAGATGGATAGCTCGATATCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCTTATTGCTCTTGCCGACGGATTACAGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGCGCGGGCTACTGCACTCGGTGATAAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGCATTATATCCTGTGCGTCGTTCATTTA
GAGTTCCCCGCGCCAGCGGGGATAAACCGC

>NZ_CP047658|1|1|1052389-1053150|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTCCGCGACCCGGCGATAAGGGAAGATGGGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TAACGACAGAGGGATTCGGCAGCGAAGAGGAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTAGTTTCGGCAGTCCAGTGCCTCGTTACGT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATAGAACGGGACGAGATTTTTAAACAATGGCT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CAATCTGAGCCAGACGCGACGAATAAAAGCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTGACGTTGATTTTGTTCGTTATGTTGCCAGCC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTGATTCATCGGCGGCGATACTGTCATCAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GAAAAACAAATAGATGGATAGCTCGATATCAT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGGCTTATTGCTCTTGCCGACGGATTACAGTG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGCGCGCGCGGGCTACTGCACTCGGTGATAAC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCGAGCATTATATCCTGTGCGTCGTTCATTTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CCAGAAAACATGAAAAAACTTTGGGAGGGGAT
GAGTTCCCATAAGCGCTAACTTAAGGGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001199966.1\|1051378_1052050_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP047658.1\|WP_000210878.1\|1047129_1048767_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP047658.1\|WP_001130266.1\|1064351_1064927_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP047658.1\|WP_000254738.1\|1045704_1046040_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP047658.1\|WP_000186450.1\|1038982_1041739_-\|two-component-sensor-histidine-kinase-BarA	unknown	unknown	gnl\|CDD\|236848
NZ_CP047658.1\|WP_000581937.1\|1045456_1045705_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP047658.1\|WP_001268461.1\|1050212_1051085_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP047658.1\|WP_001299097.1\|1063343_1064204_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP047658.1\|WP_000059300.1\|1059704_1061159_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP047658.1\|WP_000109526.1\|1064943_1065204_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP047658.1\|WP_000021322.1\|1058849_1059635_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP047658.1\|WP_001071648.1\|1046110_1046902_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP047658.1\|WP_160183230.1\|1048854_1050153_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP047658.1\|WP_000046790.1\|1041795_1043097_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP047658.1\|WP_001164544.1\|1057253_1058531_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP047658.1\|WP_005003492.1\|1053299_1054412_-\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP047658.1\|WP_000039693.1\|1055748_1057227_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP047658.1\|WP_001299652.1\|1062567_1063347_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP047658.1\|WP_001098105.1\|1061252_1062590_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP047658.1\|WP_000226815.1\|1043144_1045379_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001199966.1\|1051378_1052050_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.0458e-154
NZ_CP047658.1\|WP_000210878.1\|1047129_1048767_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP047658.1\|WP_001130266.1\|1064351_1064927_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP047658.1\|WP_000254738.1\|1045704_1046040_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP047658.1\|WP_000186450.1\|1038982_1041739_-\|two-component-sensor-histidine-kinase-BarA	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	0
NZ_CP047658.1\|WP_000581937.1\|1045456_1045705_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP047658.1\|WP_001268461.1\|1050212_1051085_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.84538e-98
NZ_CP047658.1\|WP_001299097.1\|1063343_1064204_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP047658.1\|WP_000059300.1\|1059704_1061159_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.77396e-83
NZ_CP047658.1\|WP_000109526.1\|1064943_1065204_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP047658.1\|WP_000021322.1\|1058849_1059635_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.9939e-139
NZ_CP047658.1\|WP_001071648.1\|1046110_1046902_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP047658.1\|WP_160183230.1\|1048854_1050153_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP047658.1\|WP_000046790.1\|1041795_1043097_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP047658.1\|WP_001164544.1\|1057253_1058531_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
NZ_CP047658.1\|WP_005003492.1\|1053299_1054412_-\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
NZ_CP047658.1\|WP_000039693.1\|1055748_1057227_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.97427e-109
NZ_CP047658.1\|WP_001299652.1\|1062567_1063347_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP047658.1\|WP_001098105.1\|1061252_1062590_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP047658.1\|WP_000226815.1\|1043144_1045379_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0

>NZ_CP047658.1|WP_001199966.1|1051378_1052050_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAIIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP047658.1|WP_001268461.1|1050212_1051085_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVSTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGFGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP047658.1|WP_160183230.1|1048854_1050153_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHYLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP047658.1|WP_000210878.1|1047129_1048767_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP047658.1|WP_001071648.1|1046110_1046902_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP047658.1|WP_000254738.1|1045704_1046040_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP047658.1|WP_000581937.1|1045456_1045705_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP047658.1|WP_000226815.1|1043144_1045379_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP047658.1|WP_000046790.1|1041795_1043097_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP047658.1|WP_000186450.1|1038982_1041739_-|two-component-sensor-histidine-kinase-BarA
MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDAGASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFHLDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYIALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRRGQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTIERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNRGSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYSPTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKLKQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQQTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPEVNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGLVDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREASKILG
>NZ_CP047658.1|WP_005003492.1|1053299_1054412_-|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPEGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>NZ_CP047658.1|WP_000039693.1|1055748_1057227_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP047658.1|WP_001164544.1|1057253_1058531_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP047658.1|WP_000021322.1|1058849_1059635_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASQASNYVNGHLLVVDGGYLVR
>NZ_CP047658.1|WP_000059300.1|1059704_1061159_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP047658.1|WP_001098105.1|1061252_1062590_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP047658.1|WP_001299652.1|1062567_1063347_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP047658.1|WP_001299097.1|1063343_1064204_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP047658.1|WP_001130266.1|1064351_1064927_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP047658.1|WP_000109526.1|1064943_1065204_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_2

1054472-1055110

Unclear

I-E

Consensus_repeat	Method
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GTTCCCCGCGCCAGCGGGGATAAACCG	PILER-CR
GTTCCCCGCGCCAGCGGGGATAAACCG	CRT

10 spacers

The CRISPR arrays of NZ_CP047658_2

>merge|NZ_CP047658|2|1054472-1055110|CRISPRCasFinder,PILER-CR,CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCGCTCTTCAGCAATGAAATCGTCAAACGAGATTAGAGTTCCCCGCGCCAGCGGGGATAAACCGATTACGCCGCCTCGCGTTTTTAGTCATTTCTAGAGTTCCCCGCGCCAGCGGGGATAAACCGAGGAGTTTAATTTCCAGATTGAGCGCTGGATAGAGTTCCCCGCGCCAGCGGGGATAAACCGCGTGGTCGGGATTGTTGCGCCAGTCTCCGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGCACGGCTGGCCATTTGAAATACCTGTTGCTCTGTGTTCCCCGCGCCAGCGGGGATAAACCGAACAGCGAGCCAACTGGTTTCAGATTGCTGAAGTGTTCCCCGCGCCAGCGGGGATAAACCGGCGATCTCGCGGAATACACCGACGAGGCGGGCGTGTTCCCCGCGCCAGCGGGGATAAACCGTAAGGCCGTCGCCGGATCAGCCTGGCTATGCCGAGCTCCCCGCGCCAGCGGGGATAAACCGGAGCCTGACGAGACTACTGAGGCCGTTCTGTCGAGTTCCCCGCGCCAGCGGGGATAAACCGGACGCCGCCGCCGCGAAGCCGTTTCCGATGTTGAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP047658|2|2|1054472-1055110|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CTCTTCAGCAATGAAATCGTCAAACGAGATTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATTACGCCGCCTCGCGTTTTTAGTCATTTCTA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	AGGAGTTTAATTTCCAGATTGAGCGCTGGATA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CGTGGTCGGGATTGTTGCGCCAGTCTCCGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CACGGCTGGCCATTTGAAATACCTGTTGCTCT
GTGTTCCCCGCGCCAGCGGGGATAAACCG	AACAGCGAGCCAACTGGTTTCAGATTGCTGAA
GTGTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCTCGCGGAATACACCGACGAGGCGGGC
GTGTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGCCGTCGCCGGATCAGCCTGGCTATGCC
GAGCTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTC
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCGCCGCCGCGAAGCCGTTTCCGATGTT
GAGTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP047658|2|2|1054474-1055110|PILER-CR
GTTCCCCGCGCCAGCGGGGATAAACCG	CTCTTCAGCAATGAAATCGTCAAACGAGATTAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	ATTACGCCGCCTCGCGTTTTTAGTCATTTCTAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	AGGAGTTTAATTTCCAGATTGAGCGCTGGATAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CGTGGTCGGGATTGTTGCGCCAGTCTCCGGGGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CACGGCTGGCCATTTGAAATACCTGTTGCTCTGT
GTTCCCCGCGCCAGCGGGGATAAACCG	AACAGCGAGCCAACTGGTTTCAGATTGCTGAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCTCGCGGAATACACCGACGAGGCGGGCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGCCGTCGCCGGATCAGCCTGGCTATGCCGA
GCTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTCGA
GTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCGCCGCCGCGAAGCCGTTTCCGATGTTGA
GTTCCCCGCGCCAGCGGGGATAAACCA

>NZ_CP047658|2|2|1054474-1055110|CRT
GTTCCCCGCGCCAGCGGGGATAAACCG	CTCTTCAGCAATGAAATCGTCAAACGAGATTAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	ATTACGCCGCCTCGCGTTTTTAGTCATTTCTAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	AGGAGTTTAATTTCCAGATTGAGCGCTGGATAGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CGTGGTCGGGATTGTTGCGCCAGTCTCCGGGGGA
GTTCCCCGCGCCAGCGGGGATAAACCG	CACGGCTGGCCATTTGAAATACCTGTTGCTCTGT
GTTCCCCGCGCCAGCGGGGATAAACCG	AACAGCGAGCCAACTGGTTTCAGATTGCTGAAGT
GTTCCCCGCGCCAGCGGGGATAAACCG	GCGATCTCGCGGAATACACCGACGAGGCGGGCGT
GTTCCCCGCGCCAGCGGGGATAAACCG	TAAGGCCGTCGCCGGATCAGCCTGGCTATGCCGA
GCTCCCCGCGCCAGCGGGGATAAACCG	GAGCCTGACGAGACTACTGAGGCCGTTCTGTCGA
GTTCCCCGCGCCAGCGGGGATAAACCG	GACGCCGCCGCCGCGAAGCCGTTTCCGATGTTGA
GTTCCCCGCGCCAGCGGGGATAAACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001199966.1\|1051378_1052050_+\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP047658.1\|WP_000210878.1\|1047129_1048767_+\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP047658.1\|WP_001130266.1\|1064351_1064927_-\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP047658.1\|WP_000254738.1\|1045704_1046040_+\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP047658.1\|WP_000581937.1\|1045456_1045705_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP047658.1\|WP_012304843.1\|1065194_1066466_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP047658.1\|WP_001268461.1\|1050212_1051085_-\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP047658.1\|WP_001299097.1\|1063343_1064204_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP047658.1\|WP_000059300.1\|1059704_1061159_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP047658.1\|WP_000109526.1\|1064943_1065204_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP047658.1\|WP_000021322.1\|1058849_1059635_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP047658.1\|WP_001071648.1\|1046110_1046902_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP047658.1\|WP_160183230.1\|1048854_1050153_+\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP047658.1\|WP_000046790.1\|1041795_1043097_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP047658.1\|WP_001164544.1\|1057253_1058531_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP047658.1\|WP_005003492.1\|1053299_1054412_-\|IS4-like-element-IS421-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP047658.1\|WP_000039693.1\|1055748_1057227_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP047658.1\|WP_001299652.1\|1062567_1063347_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP047658.1\|WP_001098105.1\|1061252_1062590_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP047658.1\|WP_000226815.1\|1043144_1045379_+\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001199966.1\|1051378_1052050_+\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	1.0458e-154
NZ_CP047658.1\|WP_000210878.1\|1047129_1048767_+\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP047658.1\|WP_001130266.1\|1064351_1064927_-\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP047658.1\|WP_000254738.1\|1045704_1046040_+\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP047658.1\|WP_000581937.1\|1045456_1045705_+\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP047658.1\|WP_012304843.1\|1065194_1066466_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	9.00126e-125
NZ_CP047658.1\|WP_001268461.1\|1050212_1051085_-\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.84538e-98
NZ_CP047658.1\|WP_001299097.1\|1063343_1064204_+\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP047658.1\|WP_000059300.1\|1059704_1061159_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	6.77396e-83
NZ_CP047658.1\|WP_000109526.1\|1064943_1065204_-\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	1.81311e-41
NZ_CP047658.1\|WP_000021322.1\|1058849_1059635_+\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.9939e-139
NZ_CP047658.1\|WP_001071648.1\|1046110_1046902_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP047658.1\|WP_160183230.1\|1048854_1050153_+\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP047658.1\|WP_000046790.1\|1041795_1043097_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP047658.1\|WP_001164544.1\|1057253_1058531_-\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
NZ_CP047658.1\|WP_005003492.1\|1053299_1054412_-\|IS4-like-element-IS421-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.16058e-15
NZ_CP047658.1\|WP_000039693.1\|1055748_1057227_-\|sugar-kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.97427e-109
NZ_CP047658.1\|WP_001299652.1\|1062567_1063347_+\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP047658.1\|WP_001098105.1\|1061252_1062590_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.74708e-50
NZ_CP047658.1\|WP_000226815.1\|1043144_1045379_+\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0

>NZ_CP047658.1|WP_005003492.1|1053299_1054412_-|IS4-like-element-IS421-family-transposase
MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPEGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKN
>NZ_CP047658.1|WP_001199966.1|1051378_1052050_+|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAIIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP047658.1|WP_001268461.1|1050212_1051085_-|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVSTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGFGLEEKVTDALAGDIIRSNMIPAFKQQKLAQGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP047658.1|WP_160183230.1|1048854_1050153_+|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHYLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP047658.1|WP_000210878.1|1047129_1048767_+|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP047658.1|WP_001071648.1|1046110_1046902_+|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP047658.1|WP_000254738.1|1045704_1046040_+|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP047658.1|WP_000581937.1|1045456_1045705_+|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP047658.1|WP_000226815.1|1043144_1045379_+|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP047658.1|WP_000046790.1|1041795_1043097_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKALFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILVPQLEALLPKVRACLGSLQAIRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK
>NZ_CP047658.1|WP_000039693.1|1055748_1057227_-|sugar-kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASSVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDKMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP047658.1|WP_001164544.1|1057253_1058531_-|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP047658.1|WP_000021322.1|1058849_1059635_+|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVDITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASQASNYVNGHLLVVDGGYLVR
>NZ_CP047658.1|WP_000059300.1|1059704_1061159_+|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKATGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP047658.1|WP_001098105.1|1061252_1062590_+|MFS-transporter
MNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP047658.1|WP_001299652.1|1062567_1063347_+|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP047658.1|WP_001299097.1|1063343_1064204_+|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP047658.1|WP_001130266.1|1064351_1064927_-|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP047658.1|WP_000109526.1|1064943_1065204_-|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGDLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP047658.1|WP_012304843.1|1065194_1066466_-|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGIECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_3

1080658-1080932

TypeI-E

I-E

Consensus_repeat	Method
GAGAGTTCCCCGCGCCAGCGGGGATAAACCGAT	PILER-CR
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	CRT

4 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP047658_3

>merge|NZ_CP047658|3|1080658-1080932|PILER-CR,CRISPRCasFinder,CRT
GAGAGTTCCCCGCGCCAGCGGGGATAAACCGGGTTACGCCTGCACAGAGTACAATGCGTGGGGGAGTTCCCCGCGCCAGCGGGGATAAACCGATCGGACGATGGCGATCGCAATCGCGCGGGAAGAGTTCCCCGCGCCAGCGGGGATAAACCGTTTTTGTTCTCTTCAAAACGCCGAACAACCAAGAGTTCCCCGCGTCAGCGAGGATAAACCGGACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP047658|3|3|1080658-1080812|PILER-CR
GAGAGTTCCCCGCGCCAGCGGGGATAAACCGGG	TTACGCCTGCACAGAGTACAATGCGTGG
GGGAGTTCCCCGCGCCAGCGGGGATAAACCGAT	CGGACGATGGCGATCGCAATCGCGCGGG
AAGAGTTCCCCGCGCCAGCGGGGATAAACCGTT

>NZ_CP047658|3|3|1080660-1080932|CRISPRCasFinder
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCCTGCACAGAGTACAATGCGTGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGACGATGGCGATCGCAATCGCGCGGGAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

>NZ_CP047658|3|3|1080660-1080932|CRT
GAGTTCCCCGCGCCAGCGGGGATAAACCG	GGTTACGCCTGCACAGAGTACAATGCGTGGGG
GAGTTCCCCGCGCCAGCGGGGATAAACCG	ATCGGACGATGGCGATCGCAATCGCGCGGGAA
GAGTTCCCCGCGCCAGCGGGGATAAACCG	TTTTTGTTCTCTTCAAAACGCCGAACAACCAA
GAGTTCCCCGCGTCAGCGAGGATAAACCG	GACGCACTGGATGCGATGATGGATATCACTTG
GAGTTCCCCGCCCCTGCGGTAGAACTCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_000281399.1\|1078735_1079335_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP047658.1\|WP_000433156.1\|1071903_1074570_+\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP047658.1\|WP_001258269.1\|1078074_1078749_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP047658.1\|WP_001416755.1\|1080269_1080554_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP047658.1\|WP_001246104.1\|1085233_1085557_+\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP047658.1\|WP_000490430.1\|1080952_1081990_-\|aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP047658.1\|WP_000568946.1\|1087266_1088316_+\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP047658.1\|WP_000039850.1\|1070810_1071545_+\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP047658.1\|WP_001090386.1\|1083151_1084579_+\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP047658.1\|WP_074478635.1\|1085750_1086062_+\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP047658.1\|WP_001050404.1\|1074984_1076493_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP047658.1\|WP_001173676.1\|1084578_1085184_+\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP047658.1\|WP_000372108.1\|1082241_1083150_+\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP047658.1\|WP_001219242.1\|1086790_1087270_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP047658.1\|WP_074478633.1\|1076980_1078072_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP047658.1\|WP_000752797.1\|1076485_1076968_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP047658.1\|WP_000246138.1\|1086080_1086791_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP047658.1\|WP_000220067.1\|1079350_1080268_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP047658.1\|WP_001295182.1\|1088296_1089058_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_CP047658.1\|WP_001290712.1\|1069023_1070736_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_000281399.1\|1078735_1079335_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	4.3792e-101
NZ_CP047658.1\|WP_000433156.1\|1071903_1074570_+\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP047658.1\|WP_001258269.1\|1078074_1078749_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	6.70134e-100
NZ_CP047658.1\|WP_001416755.1\|1080269_1080554_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.46262e-62
NZ_CP047658.1\|WP_001246104.1\|1085233_1085557_+\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP047658.1\|WP_000490430.1\|1080952_1081990_-\|aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP047658.1\|WP_000568946.1\|1087266_1088316_+\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP047658.1\|WP_000039850.1\|1070810_1071545_+\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
NZ_CP047658.1\|WP_001090386.1\|1083151_1084579_+\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP047658.1\|WP_074478635.1\|1085750_1086062_+\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	1.7386e-61
NZ_CP047658.1\|WP_001050404.1\|1074984_1076493_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP047658.1\|WP_001173676.1\|1084578_1085184_+\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	1.20197e-146
NZ_CP047658.1\|WP_000372108.1\|1082241_1083150_+\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP047658.1\|WP_001219242.1\|1086790_1087270_+\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP047658.1\|WP_074478633.1\|1076980_1078072_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	1.11731e-150
NZ_CP047658.1\|WP_000752797.1\|1076485_1076968_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.83779e-33
NZ_CP047658.1\|WP_000246138.1\|1086080_1086791_+\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP047658.1\|WP_000220067.1\|1079350_1080268_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	3.34057e-159
NZ_CP047658.1\|WP_001295182.1\|1088296_1089058_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150
NZ_CP047658.1\|WP_001290712.1\|1069023_1070736_+\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0

>NZ_CP047658.1|WP_001416755.1|1080269_1080554_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTESGFEFQTFGVNRRTPVDLDGLRLVSFLPV
>NZ_CP047658.1|WP_000220067.1|1079350_1080268_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTVNQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP047658.1|WP_000281399.1|1078735_1079335_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVITINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP047658.1|WP_001258269.1|1078074_1078749_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPQATMVMSELEKAVLKPRYTPYLGRRSCPLTQPLFLGTCQASDPQKVLLNYEPVGGDIYSEESVDGHHLKFTVRDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP047658.1|WP_074478633.1|1076980_1078072_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSDYYAQNIGESSLRTIHLAQLRDVLRQKLSERFDQKIIDKTLALLSGKSVNEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMSELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKANDGFLQPSLQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITGQVQQMPTLEQLKSWVRNNGEA
>NZ_CP047658.1|WP_000752797.1|1076485_1076968_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGACAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKPEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLAHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP047658.1|WP_001050404.1|1074984_1076493_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIDPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPITTFVRGIDLRSTVLLNVLTIPRLQKQFPNESHTENQPTWVKPVKPNESVPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP047658.1|WP_000433156.1|1071903_1074570_+|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQVCLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISDFGKNGERNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVIKGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSYEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNQDGWFWQGNSIVITYTRDEGMTRVIPANPK
>NZ_CP047658.1|WP_000039850.1|1070810_1071545_+|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP047658.1|WP_001290712.1|1069023_1070736_+|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLSGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD
>NZ_CP047658.1|WP_000490430.1|1080952_1081990_-|aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEVFDKAGIAVLSVEATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP047658.1|WP_000372108.1|1082241_1083150_+|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP047658.1|WP_001090386.1|1083151_1084579_+|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEKTFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMAWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP047658.1|WP_001173676.1|1084578_1085184_+|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRYFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP047658.1|WP_001246104.1|1085233_1085557_+|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP047658.1|WP_074478635.1|1085750_1086062_+|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYIRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP047658.1|WP_000246138.1|1086080_1086791_+|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP047658.1|WP_001219242.1|1086790_1087270_+|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP047658.1|WP_000568946.1|1087266_1088316_+|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLNDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP047658.1|WP_001295182.1|1088296_1089058_+|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_4

1573252-1573369

Orphan

Consensus_repeat	Method
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_4

>merge|NZ_CP047658|4|1573252-1573369|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGCTGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAACCGAGCCGTAGGCCGGATAAGGCGTTTACGC

>NZ_CP047658|4|4|1573252-1573369|CRISPRCasFinder
CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	TGCATCCGGCACCCGGAGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAA
CCGAGCCGTAGGCCGGATAAGGCGTTTACGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_000779091.1\|1569527_1570604_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP047658.1\|WP_001225852.1\|1592395_1593172_+\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP047658.1\|WP_001000358.1\|1563827_1565018_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP047658.1\|WP_112022334.1\|1590741_1592391_+\|DUF2300-domain-containing-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP047658.1\|WP_000990753.1\|1580249_1580972_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP047658.1\|WP_000992951.1\|1561887_1562691_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	unknown	unknown	gnl\|CDD\|182257
NZ_CP047658.1\|WP_112022333.1\|1594460_1595783_-\|TIGR00366-family-protein	unknown	unknown	gnl\|CDD\|280776
NZ_CP047658.1\|WP_021575256.1\|1583894_1585583_+\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP047658.1\|WP_000948723.1\|1568164_1569523_+\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP047658.1\|WP_000301049.1\|1571066_1571717_+\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP047658.1\|WP_112022335.1\|1565014_1566274_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP047658.1\|WP_000332037.1\|1572024_1573155_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP047658.1\|WP_001075164.1\|1573388_1575674_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP047658.1\|WP_000135040.1\|1571770_1572025_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668
NZ_CP047658.1\|WP_074477805.1\|1593245_1594430_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP047658.1\|WP_061359900.1\|1566263_1567892_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP047658.1\|WP_001281254.1\|1581118_1583746_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP047658.1\|WP_001295211.1\|1585579_1586203_+\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP047658.1\|WP_122987551.1\|1586346_1590741_+\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP047658.1\|WP_000140587.1\|1562731_1563634_-\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_000779091.1\|1569527_1570604_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP047658.1\|WP_001225852.1\|1592395_1593172_+\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
NZ_CP047658.1\|WP_001000358.1\|1563827_1565018_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP047658.1\|WP_112022334.1\|1590741_1592391_+\|DUF2300-domain-containing-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	2.17526e-126
NZ_CP047658.1\|WP_000990753.1\|1580249_1580972_-\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.58484e-171
NZ_CP047658.1\|WP_000992951.1\|1561887_1562691_+\|2-keto-3-deoxy-L-rhamnonate-aldolase	gnl\|CDD\|182257	PRK10128, PRK10128, 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional.	0
NZ_CP047658.1\|WP_112022333.1\|1594460_1595783_-\|TIGR00366-family-protein	gnl\|CDD\|280776	pfam02667, SCFA_trans, Short chain fatty acid transporter. This family consists of two sequences annotated as short chain fatty acid transporters, however, there are no references giving details of experimental characterization of this function.	0
NZ_CP047658.1\|WP_021575256.1\|1583894_1585583_+\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP047658.1\|WP_000948723.1\|1568164_1569523_+\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP047658.1\|WP_000301049.1\|1571066_1571717_+\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	1.43283e-158
NZ_CP047658.1\|WP_112022335.1\|1565014_1566274_-\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP047658.1\|WP_000332037.1\|1572024_1573155_-\|ribonucleoside-diphosphate-reductase-1-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP047658.1\|WP_001075164.1\|1573388_1575674_-\|ribonucleoside-diphosphate-reductase-1-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP047658.1\|WP_000135040.1\|1571770_1572025_-\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53
NZ_CP047658.1\|WP_074477805.1\|1593245_1594430_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP047658.1\|WP_061359900.1\|1566263_1567892_-\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP047658.1\|WP_001281254.1\|1581118_1583746_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP047658.1\|WP_001295211.1\|1585579_1586203_+\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
NZ_CP047658.1\|WP_122987551.1\|1586346_1590741_+\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP047658.1\|WP_000140587.1\|1562731_1563634_-\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0

>NZ_CP047658.1|WP_000332037.1|1572024_1573155_-|ribonucleoside-diphosphate-reductase-1-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP047658.1|WP_000135040.1|1571770_1572025_-|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP047658.1|WP_000301049.1|1571066_1571717_+|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP047658.1|WP_000779091.1|1569527_1570604_+|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTTDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP047658.1|WP_000948723.1|1568164_1569523_+|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFFYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRNGG
>NZ_CP047658.1|WP_061359900.1|1566263_1567892_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGIIAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL
>NZ_CP047658.1|WP_112022335.1|1565014_1566274_-|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQLQGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQHQFVHQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP047658.1|WP_001000358.1|1563827_1565018_-|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVITDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP047658.1|WP_000140587.1|1562731_1563634_-|ISNCY-family-transposase
MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDEPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGIDRDQVLAATQLSEADLAANNH
>NZ_CP047658.1|WP_000992951.1|1561887_1562691_+|2-keto-3-deoxy-L-rhamnonate-aldolase
MNALLSNPFKERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAVAPDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY
>NZ_CP047658.1|WP_001075164.1|1573388_1575674_-|ribonucleoside-diphosphate-reductase-1-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP047658.1|WP_000990753.1|1580249_1580972_-|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP047658.1|WP_001281254.1|1581118_1583746_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVEGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGEGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP047658.1|WP_021575256.1|1583894_1585583_+|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVHFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP047658.1|WP_001295211.1|1585579_1586203_+|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP047658.1|WP_122987551.1|1586346_1590741_+|alpha-2-macroglobulin-family-protein
MRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVEQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVMGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVDVTLDARNGGQGSFRLPENAVAGGDELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQAAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEYWRWVGQGVPDILSFGDELSPQNVQVRWREPAKTAQQSNIPVTVERQLYRLIPGEEEMSFTLQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP047658.1|WP_112022334.1|1590741_1592391_+|DUF2300-domain-containing-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFANDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMAAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP047658.1|WP_001225852.1|1592395_1593172_+|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP047658.1|WP_074477805.1|1593245_1594430_-|acetyl-CoA-C-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQYVDEVIMGNVLQAGLGQNPARQALLKSVLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKADSTTEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP047658.1|WP_112022333.1|1594460_1595783_-|TIGR00366-family-protein
MIGRISRFMTRFVSRWLPDPLIFAMLLTLLTFVIALWLTPQTPISMVKMWGDGFWNLLAFGMQMALIIVTGHALASSAPVKSLLRTAASAAKTPVQGVMLVTFFGSVACVINWGFGLVVGAMFAREVARRVPGSDYPLLIACAYIGFLTWGGGFSGSMPLLAATPGNPVEHIAGLIPVGDTLFSGFNIFITVALIVVMPFITRMMMPKPSDVVSIDPKLLMEEADFQKQLPKDAPPSERLEESRILTLIIGALGIAYLAMYFSEHGFNITINTVNLMFMIAGLLLHKTPMAYMRAISAAARSTAGILVQFPFYAGIQLMMEHSGLGGLITEFFINVANKDTFPVMTFFSSALINFAVPSGGGHWVIQGSFVIPAAQALGADLGKSVMAIAYGEQWMNMAQPFWALPALAIAGLGVRDIMGYCITALLFSGVIFVIGLTLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_5

2225564-2225687

Orphan

Consensus_repeat	Method
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_5

>merge|NZ_CP047658|5|2225564-2225687|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTACGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

>NZ_CP047658|5|5|2225564-2225687|CRISPRCasFinder
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	CGGACGCAGGATGGTGCGTTCAATTGGACTCGAACCAA
CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001070230.1\|2217651_2218278_+\|ferredoxin-like-protein	unknown	unknown	gnl\|CDD\|182135
NZ_CP047658.1\|WP_000098898.1\|2229567_2230716_-\|cyclopropane-fatty-acyl-phospholipid-synthase	unknown	unknown	gnl\|CDD\|183282
NZ_CP047658.1\|WP_000190982.1\|2233259_2234285_-\|HTH-type-transcriptional-repressor-PurR	unknown	unknown	gnl\|CDD\|236739
NZ_CP047658.1\|WP_000493947.1\|2228886_2229528_+\|riboflavin-synthase	unknown	unknown	gnl\|CDD\|183846
NZ_CP047658.1\|WP_000587555.1\|2222569_2223382_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182159
NZ_CP047658.1\|WP_000716904.1\|2223393_2224998_-\|FAD-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|182134
NZ_CP047658.1\|WP_000269501.1\|2232330_2233263_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182948
NZ_CP047658.1\|WP_001069987.1\|2221780_2222566_+\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968
NZ_CP047658.1\|WP_001349911.1\|2221115_2221784_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP047658.1\|WP_001174962.1\|2227298_2228672_-\|multidrug-efflux-MATE-transporter-MdtK	unknown	unknown	gnl\|CDD\|234981
NZ_CP047658.1\|WP_000534272.1\|2226001_2227258_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|137602
NZ_CP047658.1\|WP_000504352.1\|2220404_2221052_+\|YdhW-family-putative-oxidoreductase-system-protein	unknown	unknown	gnl\|CDD\|182160
NZ_CP047658.1\|WP_001295403.1\|2215018_2216431_-\|pyruvate-kinase-I	unknown	unknown	gnl\|CDD\|181699
NZ_CP047658.1\|WP_000528342.1\|2216987_2217197_+\|fumarate-hydratase-FumD	unknown	unknown	gnl\|CDD\|182359
NZ_CP047658.1\|WP_000212657.1\|2225123_2225429_-\|monooxygenase	unknown	unknown	gnl\|CDD\|182975
NZ_CP047658.1\|WP_000701040.1\|2234838_2236008_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP047658.1\|WP_000007283.1\|2236153_2236735_-\|superoxide-dismutase-[Fe]	unknown	unknown	gnl\|CDD\|182534
NZ_CP047658.1\|WP_001182363.1\|2231006_2232218_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|182924
NZ_CP047658.1\|WP_001273518.1\|2218298_2220401_+\|aldehyde-ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|236629
NZ_CP047658.1\|WP_000102278.1\|2234583_2234673_+\|stress-response-protein-YnhF	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001070230.1\|2217651_2218278_+\|ferredoxin-like-protein	gnl\|CDD\|182135	PRK09898, PRK09898, ferredoxin-like protein.	6.99609e-140
NZ_CP047658.1\|WP_000098898.1\|2229567_2230716_-\|cyclopropane-fatty-acyl-phospholipid-synthase	gnl\|CDD\|183282	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase.	0
NZ_CP047658.1\|WP_000190982.1\|2233259_2234285_-\|HTH-type-transcriptional-repressor-PurR	gnl\|CDD\|236739	PRK10703, PRK10703, HTH-type transcriptional repressor PurR.	0
NZ_CP047658.1\|WP_000493947.1\|2228886_2229528_+\|riboflavin-synthase	gnl\|CDD\|183846	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional.	2.24506e-123
NZ_CP047658.1\|WP_000587555.1\|2222569_2223382_+\|hypothetical-protein	gnl\|CDD\|182159	PRK09946, PRK09946, hypothetical protein; Provisional.	9.78241e-175
NZ_CP047658.1\|WP_000716904.1\|2223393_2224998_-\|FAD-NAD(P)-binding-protein	gnl\|CDD\|182134	PRK09897, PRK09897, FAD-NAD(P)-binding protein.	0
NZ_CP047658.1\|WP_000269501.1\|2232330_2233263_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|182948	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional.	0
NZ_CP047658.1\|WP_001069987.1\|2221780_2222566_+\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	1.01591e-161
NZ_CP047658.1\|WP_001349911.1\|2221115_2221784_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	7.32003e-76
NZ_CP047658.1\|WP_001174962.1\|2227298_2228672_-\|multidrug-efflux-MATE-transporter-MdtK	gnl\|CDD\|234981	PRK01766, PRK01766, multidrug efflux protein; Reviewed.	0
NZ_CP047658.1\|WP_000534272.1\|2226001_2227258_+\|hypothetical-protein	gnl\|CDD\|137602	PRK09945, PRK09945, hypothetical protein; Provisional.	0
NZ_CP047658.1\|WP_000504352.1\|2220404_2221052_+\|YdhW-family-putative-oxidoreductase-system-protein	gnl\|CDD\|182160	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein.	2.81741e-122
NZ_CP047658.1\|WP_001295403.1\|2215018_2216431_-\|pyruvate-kinase-I	gnl\|CDD\|181699	PRK09206, PRK09206, pyruvate kinase PykF.	0
NZ_CP047658.1\|WP_000528342.1\|2216987_2217197_+\|fumarate-hydratase-FumD	gnl\|CDD\|182359	PRK10292, PRK10292, fumarate hydratase FumD.	2.11502e-34
NZ_CP047658.1\|WP_000212657.1\|2225123_2225429_-\|monooxygenase	gnl\|CDD\|182975	PRK11118, PRK11118, putative monooxygenase; Provisional.	1.12003e-64
NZ_CP047658.1\|WP_000701040.1\|2234838_2236008_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.92383e-98
NZ_CP047658.1\|WP_000007283.1\|2236153_2236735_-\|superoxide-dismutase-[Fe]	gnl\|CDD\|182534	PRK10543, PRK10543, superoxide dismutase [Fe].	3.77321e-138
NZ_CP047658.1\|WP_001182363.1\|2231006_2232218_-\|Bcr/CflA-family-multidrug-efflux-MFS-transporter	gnl\|CDD\|182924	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter.	0
NZ_CP047658.1\|WP_001273518.1\|2218298_2220401_+\|aldehyde-ferredoxin-oxidoreductase	gnl\|CDD\|236629	PRK09849, PRK09849, putative oxidoreductase; Provisional.	0

>NZ_CP047658.1|WP_000212657.1|2225123_2225429_-|monooxygenase
MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTESEKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA
>NZ_CP047658.1|WP_000716904.1|2223393_2224998_-|FAD-NAD(P)-binding-protein
MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPYSDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILLGEYFRDQFLRLVDQARKQKFAVAVYESCQVTDLQITNAGVMLATNQGLPRETFDLAVIATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFIEDDKQHVVFHRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKGEEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFAQAWFAERKQRDPFDWAEKNLQEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPSESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKVKDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTACAEIGEAMARAVVKPASRARRRLSFD
>NZ_CP047658.1|WP_000587555.1|2222569_2223382_+|hypothetical-protein
MIITRADLREWRIGAVMYRWFLRHFPRGGSYADIHHALIEEGYTDWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCEDNARIATAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRIANTGMRVRVCTLGERCHVASNGDLAQIASFGANARIANSGDNVHIIASGENSTVVSTGVVDSIILGPGGSAALAYHDGERVRFAVAIEGENNIRAGVRYRLNEQHQFVEC
>NZ_CP047658.1|WP_001069987.1|2221780_2222566_+|thiosulfate-reductase-cytochrome-B-subunit
MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVLGLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGATAVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGIMQGEEHPLPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYWLLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH
>NZ_CP047658.1|WP_001349911.1|2221115_2221784_+|4Fe-4S-dicluster-domain-containing-protein
MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDESRCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCIDVCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLAKGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIKKENV
>NZ_CP047658.1|WP_000504352.1|2220404_2221052_+|YdhW-family-putative-oxidoreductase-system-protein
MGEMNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
>NZ_CP047658.1|WP_001273518.1|2218298_2220401_+|aldehyde-ferredoxin-oxidoreductase
MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDEVPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQMKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCVAAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKRLNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPPGNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGNTCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYSKGVFKRVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWNLGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPLKLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTVSPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRNEHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGCPTRETLQRLGLEDIAADLAAHNLLPV
>NZ_CP047658.1|WP_001070230.1|2217651_2218278_+|ferredoxin-like-protein
MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQEDIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFGDNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITV
>NZ_CP047658.1|WP_000528342.1|2216987_2217197_+|fumarate-hydratase-FumD
MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTALANKRIQRSELEKQAMETVINALVK
>NZ_CP047658.1|WP_001295403.1|2215018_2216431_-|pyruvate-kinase-I
MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVVMVSGALVPSGTTNTASVHVL
>NZ_CP047658.1|WP_000534272.1|2226001_2227258_+|hypothetical-protein
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGTDGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGAELQQSTITVQQGGVLILDGSTVKGDSVTFSVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
>NZ_CP047658.1|WP_001174962.1|2227298_2228672_-|multidrug-efflux-MATE-transporter-MdtK
MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDMAAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLIMLVLWNAGYIIRSMENIDPALAEKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQIALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTVSLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITFTAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRMPSAIILQRASR
>NZ_CP047658.1|WP_000493947.1|2228886_2229528_+|riboflavin-synthase
MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAHNGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGHIMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVHLIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA
>NZ_CP047658.1|WP_000098898.1|2229567_2230716_-|cyclopropane-fatty-acyl-phospholipid-synthase
MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNPDFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGARLFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISAEQQKMAQERCEGLDVTILLQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQSSESHFVMEDWHNFGADYDTTLMAWYERFLAAWPEIADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR
>NZ_CP047658.1|WP_001182363.1|2231006_2232218_-|Bcr/CflA-family-multidrug-efflux-MFS-transporter
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
>NZ_CP047658.1|WP_000269501.1|2232330_2233263_+|LysR-family-transcriptional-regulator
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
>NZ_CP047658.1|WP_000190982.1|2233259_2234285_-|HTH-type-transcriptional-repressor-PurR
MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELHYSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQGDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR
>NZ_CP047658.1|WP_000102278.1|2234583_2234673_+|stress-response-protein-YnhF
MSTDLKFSLVTTIIVLGLIVAVGLTAALH
>NZ_CP047658.1|WP_000701040.1|2234838_2236008_+|MFS-transporter
MKINYPLLALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAAGMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSRILTSLNHGAFFGLGSVVAASVVPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGWRMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGAMFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYLGGKLADRSVNGTLKGFLLLLMVIMLAIPFLARNEFGAAISMVVWGAATFAVVPPLQMRVMRVASEAPGLSSSVNIGAFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS
>NZ_CP047658.1|WP_000007283.1|2236153_2236735_-|superoxide-dismutase-[Fe]
MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_6

2953241-2953332

Orphan

Consensus_repeat	Method
CCACCTTTTTTACCTGCTTCAGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_6

>merge|NZ_CP047658|6|2953241-2953332|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGCGCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGTCCACCTTTTTTACCTGCTTCTGATGC

>NZ_CP047658|6|6|2953241-2953332|CRISPRCasFinder
CCACCTTTTTTACCTGCTTCAGATGC	GCGCTGCGGGTCATTCTTGAAATTACCCCCGCTGTGCTGT
CCACCTTTTTTACCTGCTTCTGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001062091.1\|2959843_2962390_-\|trimethylamine-N-oxide-reductase-TorA	unknown	unknown	gnl\|CDD\|237909
NZ_CP047658.1\|WP_001301233.1\|2947508_2948600_+\|pyrimidine-utilization-protein-A	unknown	unknown	gnl\|CDD\|163355
NZ_CP047658.1\|WP_001151437.1\|2953755_2954352_+\|NAD(P)H:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|179647
NZ_CP047658.1\|WP_001307708.1\|2948599_2949292_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	unknown	unknown	gnl\|CDD\|163356
NZ_CP047658.1\|WP_000420621.1\|2957870_2958791_+\|curved-DNA-binding-protein	unknown	unknown	gnl\|CDD\|182347
NZ_CP047658.1\|WP_001028095.1\|2951108_2951603_+\|pyrimidine-utilization-flavin-reductase-protein-F	unknown	unknown	gnl\|CDD\|132654
NZ_CP047658.1\|WP_000535362.1\|2956353_2957610_-\|YccE-family-protein	unknown	unknown	gnl\|CDD\|182074
NZ_CP047658.1\|WP_001230242.1\|2962389_2963562_-\|pentaheme-c-type-cytochrome-TorC	unknown	unknown	gnl\|CDD\|184992
NZ_CP047658.1\|WP_001301219.1\|2946581_2947220_-\|HTH-type-transcriptional-regulator-RutR	unknown	unknown	gnl\|CDD\|184970
NZ_CP047658.1\|WP_001143120.1\|2954372_2954600_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182285
NZ_CP047658.1\|WP_001126780.1\|2949303_2949690_+\|pyrimidine-utilization-protein-C	unknown	unknown	gnl\|CDD\|274677
NZ_CP047658.1\|WP_001619304.1\|2949697_2950498_+\|pyrimidine-utilization-protein-D	unknown	unknown	gnl\|CDD\|211851
NZ_CP047658.1\|WP_001044280.1\|2954819_2956061_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	unknown	unknown	gnl\|CDD\|182284
NZ_CP047658.1\|WP_001001189.1\|2950507_2951098_+\|malonic-semialdehyde-reductase	unknown	unknown	gnl\|CDD\|180040
NZ_CP047658.1\|WP_012304885.1\|2951623_2952952_+\|pyrimidine-utilization-transport-protein-G	unknown	unknown	gnl\|CDD\|132655
NZ_CP047658.1\|WP_000979516.1\|2942315_2942525_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047658.1\|WP_000024560.1\|2958790_2959096_+\|chaperone-modulator-CbpM	unknown	unknown	gnl\|CDD\|182346
NZ_CP047658.1\|WP_001741503.1\|2942579_2946542_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|236989
NZ_CP047658.1\|WP_001120125.1\|2963691_2964384_+\|two-component-system-response-regulator-TorR	unknown	unknown	gnl\|CDD\|182711
NZ_CP047658.1\|WP_000209915.1\|2959247_2959847_-\|molecular-chaperone-TorD	unknown	unknown	gnl\|CDD\|235326

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001301219.1\|2946581_2947220_-\|HTH-type-transcriptional-regulator-RutR	gnl\|CDD\|184970	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional.	3.85643e-153
NZ_CP047658.1\|WP_001301233.1\|2947508_2948600_+\|pyrimidine-utilization-protein-A	gnl\|CDD\|163355	TIGR03612, RutA, pyrimidine utilization protein A. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the luciferase family defined by pfam00296 and is likely a FMN-dependent monoxygenase. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP047658.1\|WP_001151437.1\|2953755_2954352_+\|NAD(P)H:quinone-oxidoreductase	gnl\|CDD\|179647	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional.	8.51484e-133
NZ_CP047658.1\|WP_001307708.1\|2948599_2949292_+\|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB	gnl\|CDD\|163356	TIGR03614, RutB, pyrimidine utilization protein B.	5.84226e-169
NZ_CP047658.1\|WP_000420621.1\|2957870_2958791_+\|curved-DNA-binding-protein	gnl\|CDD\|182347	PRK10266, PRK10266, curved DNA-binding protein.	0
NZ_CP047658.1\|WP_001028095.1\|2951108_2951603_+\|pyrimidine-utilization-flavin-reductase-protein-F	gnl\|CDD\|132654	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the flavin reductase family defined by pfam01613. Presumably, this protein recycles the flavin of the RutA luciferase-like oxidoreductase.	3.76111e-106
NZ_CP047658.1\|WP_000535362.1\|2956353_2957610_-\|YccE-family-protein	gnl\|CDD\|182074	PRK09784, PRK09784, YccE family protein.	0
NZ_CP047658.1\|WP_001230242.1\|2962389_2963562_-\|pentaheme-c-type-cytochrome-TorC	gnl\|CDD\|184992	PRK15032, PRK15032, pentaheme c-type cytochrome TorC.	0
NZ_CP047658.1\|WP_001143120.1\|2954372_2954600_+\|hypothetical-protein	gnl\|CDD\|182285	PRK10174, PRK10174, hypothetical protein; Provisional.	8.66725e-44
NZ_CP047658.1\|WP_001062091.1\|2959843_2962390_-\|trimethylamine-N-oxide-reductase-TorA	gnl\|CDD\|237909	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA.	0
NZ_CP047658.1\|WP_001126780.1\|2949303_2949690_+\|pyrimidine-utilization-protein-C	gnl\|CDD\|274677	TIGR03610, RutC, pyrimidine utilization protein C. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the endoribonuclease L-PSP family defined by pfam01042.	5.99808e-85
NZ_CP047658.1\|WP_001619304.1\|2949697_2950498_+\|pyrimidine-utilization-protein-D	gnl\|CDD\|211851	TIGR03611, RutD, pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.	4.69786e-141
NZ_CP047658.1\|WP_001001189.1\|2950507_2951098_+\|malonic-semialdehyde-reductase	gnl\|CDD\|180040	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional.	1.17913e-130
NZ_CP047658.1\|WP_012304885.1\|2951623_2952952_+\|pyrimidine-utilization-transport-protein-G	gnl\|CDD\|132655	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).	0
NZ_CP047658.1\|WP_001044280.1\|2954819_2956061_-\|bifunctional-glucose-1-phosphatase/inositol-phosphatase	gnl\|CDD\|182284	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional.	0
NZ_CP047658.1\|WP_000024560.1\|2958790_2959096_+\|chaperone-modulator-CbpM	gnl\|CDD\|182346	PRK10265, PRK10265, chaperone modulator CbpM.	5.75956e-65
NZ_CP047658.1\|WP_001741503.1\|2942579_2946542_+\|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|236989	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed.	0
NZ_CP047658.1\|WP_001120125.1\|2963691_2964384_+\|two-component-system-response-regulator-TorR	gnl\|CDD\|182711	PRK10766, PRK10766, two-component system response regulator TorR.	1.16516e-137
NZ_CP047658.1\|WP_000209915.1\|2959247_2959847_-\|molecular-chaperone-TorD	gnl\|CDD\|235326	PRK04976, torD, chaperone protein TorD; Validated.	1.16812e-84

>NZ_CP047658.1|WP_012304885.1|2951623_2952952_+|pyrimidine-utilization-transport-protein-G
MAMFGLPHWQLKSTSTESGVVAPDERLPFAQTAIMGVQHAVAMFGATVLMPILMGLDPNLSILMSGIGTLLFFFITGGRVPSYLGSSAAFVGVVIAATGFNGQGINPNISIALGGIIACGLVYTVIGLVVMKIGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKSVSASAFDSWMAVMTVLCIGLVAVFTRGMIQRLLILVGLIVACLLYGVMTNVLGLGKAVDFTLVSHAAWFGLPHFSTPAFNGQAMMLIAPVAVILVAENLGHLKAVAGMTGRNMDPYMGRAFVGDGLATMLSGSVGGSGVTTYAENIGVMAVTKVYSTLVFVAAAVIAMLLGFSPKFGALIHTIPAAVIGGASIVVFGLIAVAGARIWVQNRVDLSQNGNLIMVAVTLVLGAGDFALTLGGFTLGGIGTATFGAILLNALLSRKLVDVPPPEVVHQEP
>NZ_CP047658.1|WP_001028095.1|2951108_2951603_+|pyrimidine-utilization-flavin-reductase-protein-F
MNIVDQQTFRDAMSCMGAAVNIITTDGPAGRAGFTASAVCSVTDTPPTLLVCLNRGASVWPVFNENRTLCVNTLSAGQEPLSNLFGGKTPMEHRFAAARWQTGVTGCPQLEEALVSFDCRISQVVSVGTHDILFCAIEAIHRHATPYGLVWFDRSYHALMRPAC
>NZ_CP047658.1|WP_001001189.1|2950507_2951098_+|malonic-semialdehyde-reductase
MNEAVSPGALSTLFTDARTHNGWRETPVSDETLRELYALMKWGPTSANCSPARIVFIRTAEGKERLRPALSSGNLQKTLTAPVTAIVAWDSEFYERLPQLFPHGDARSWFTSSPQLAEETAFRNSSMQAAYLIIACRALGLDTGPMSGFDRQHVDDAFFAGSTLKSNLLINIGYGDSSKLFARLPRLSFEEACGLL
>NZ_CP047658.1|WP_001619304.1|2949697_2950498_+|pyrimidine-utilization-protein-D
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQVLVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLVSVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPSACSSELHAALPDSQKMVMRYGGHACNVTDPETFNALLLNGLASLLHHREAAL
>NZ_CP047658.1|WP_001126780.1|2949303_2949690_+|pyrimidine-utilization-protein-C
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFCIQCGLVKPDALVEIATIAHIAK
>NZ_CP047658.1|WP_001307708.1|2948599_2949292_+|peroxyureidoacrylate/ureidoacrylate-amidohydrolase-RutB
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFAQKAALFNIETFFGWVSDVETFCDALSPTSFARIA
>NZ_CP047658.1|WP_001301233.1|2947508_2948600_+|pyrimidine-utilization-protein-A
MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDFALSMIKLRGFGGKTEFWDHNLESFTLMAGLAAVTSRIQIYATAATLTLPPAIVARMAATIDSISGGRFGVNLVTGWQKPEYEQMGIWPGDDYFSRRYDYLTEYVQVLRDLWGTGKSDFKGDFFTMNDCRVSPQPSVPMKVICAGQSDAGMAFSAQYADFNFCFGKGVNTPTAFAPTAARMKQAAEQTGRDVGSYVLFMVIADETDDAARAKWEHYKAGADEEALSWLTEQSQKDTRSGTDTNVRQMADPTSAVNINMGTLVGSYASVARMLDEVASVPGAEGVLLTFDDFLSGIETFGERIQPLMQCRAHLPVLTQEVA
>NZ_CP047658.1|WP_001301219.1|2946581_2947220_-|HTH-type-transcriptional-regulator-RutR
MTQGAVKTTGKRSRVVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
>NZ_CP047658.1|WP_001741503.1|2942579_2946542_+|trifunctional-transcriptional-regulator/proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQLENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRPETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKATRDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEEKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPLVIDYLIDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTHETLLAYLVRRLLENGANTSFVNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDLANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPREVEQALESAVNNAPIWFATPPVERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGSTEVATLLQRNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVIDVLASAFDSAGQRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKVNIERHIQTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELQKEVFGPVLHVVRYNRNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNALREWAANRPELQALCTQYGELAQAGTQRLLPGPTGERNTWTLLPRERVLCIADDEQDALTQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDSDQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
>NZ_CP047658.1|WP_000979516.1|2942315_2942525_-|hypothetical-protein
MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQLTFLKGATAKNVRECNLMKNSVAEH
>NZ_CP047658.1|WP_001151437.1|2953755_2954352_+|NAD(P)H:quinone-oxidoreductase
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG
>NZ_CP047658.1|WP_001143120.1|2954372_2954600_+|hypothetical-protein
MPTQEAKAHHVGEWASLRNTSPEIAEAIFEVAGYDEKMAEKIWEEGSDEVLVKAFAKTDKDSLFWGEQTIERKNV
>NZ_CP047658.1|WP_001044280.1|2954819_2956061_-|bifunctional-glucose-1-phosphatase/inositol-phosphatase
MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVLMMSRHNLRAPLANNGSVLEQSTPNKWPEWDVPGGQLTTKGGVLEVYMGHYMREWLAEQGMVKSGECPPPYTVYAYANSLQRTVATAQFFITGAFPGCDIPVHHQEKMGTMDPTFNPVITDDSAAFSEQAVAAMEKELSKLQLTDSYQLLEKIVNYKDSPACKEKQQCSLVDGKNTFSAKYQQEPGVSGPLKVGNSLVDAFTLQYYEGFPMDQVAWGEIKSDQQWKVLSKLKNGYQDSLFTSPEVARNVAKPLVSYIDKALVTDRTSAPKITVLVGHDSNIASLLTALDFKPYQLHDQNERTPIGGKIVFQRWHDSKANRDLMKIEYVYQSAEQLRNADALTLQAPAQRVTLELSGCPIDANGFCPMDKFDSVLNEAVK
>NZ_CP047658.1|WP_000535362.1|2956353_2957610_-|YccE-family-protein
MGSNIHGISCTANNYLKQAWNDIKNEYEKNQTYSITLFENTLVCFMRLYNELRRKVNEEDTPCLECESLEKEFEEMQNDNDLSLFMRTLRTNDTQIYSGVSGGITYTIQYVRDIDIVRVSLPGRASESITDFKGYYWYGFMEYIENINACDDVFSEYCFDDENISVQPERINTPGISDLDSDIDLSGISFIQRETNQALGLKYAPVDGDGYCLLRAILVLKQHDYSWALVSYKMQKEVYNEFIKMVDKKTIEALVDTAFYNLREDVKTLFGVDLQSDNQIQGQSSLMSWSFLFFKKQFIDSCLNNEKCILHLPEFIFNDNKNLLALDTDTSDRIKAVKNFLAVLSDSICSLFIVNSNVASISLGNESFSTDEDLEYGYLMNTGNHYDVYLPPELFAQAYKLNNKEMNAQLDYLNRYAI
>NZ_CP047658.1|WP_000420621.1|2957870_2958791_+|curved-DNA-binding-protein
MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIFGQHARQSRQRPATRGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVSPWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMPPKPDENTAALWQQLADAQSSFDPRKDWGKA
>NZ_CP047658.1|WP_000024560.1|2958790_2959096_+|chaperone-modulator-CbpM
MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWVFDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP
>NZ_CP047658.1|WP_000209915.1|2959247_2959847_-|molecular-chaperone-TorD
MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLLKSEPPLVAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQEIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTALWQWLPEFVARCRQYDSFGFYAALSQLLLVLVECDHQNR
>NZ_CP047658.1|WP_001062091.1|2959843_2962390_-|trimethylamine-N-oxide-reductase-TorA
MNNNDLFQASRRRFLAQLGGLTVAGMLGPSLLTPRRATAAQAATDAVISKEGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGREHVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSSTIPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPATTQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHLPAFDDFWNNKEYVEFDHPQMFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVAGKEPVFINPQDASARGIRNGDVVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYNGTVEQVTAFNGPVEMVAQCEYVPASQVKS
>NZ_CP047658.1|WP_001230242.1|2962389_2963562_-|pentaheme-c-type-cytochrome-TorC
MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTSTTEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQTFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQMKVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAKGDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGDVQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHGAPEIAHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDTAGKAHGDKKEEK
>NZ_CP047658.1|WP_001120125.1|2963691_2964384_+|two-component-system-response-regulator-TorR
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_7

3095024-3095229

Orphan

I-F

Consensus_repeat	Method
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRISPRCasFinder
TTTCTAAGCTGCCTGTACGGCAGTGAAC	CRT
TTTCTAAGCTGCCTGTACGGCAGTGAACG	PILER-CR

3 spacers

The CRISPR arrays of NZ_CP047658_7

>merge|NZ_CP047658|7|3095024-3095229|CRISPRCasFinder,CRT,PILER-CR
CATTTTATCTGTCTGTACGGCAGTGAACATGGTGGGTGGAGTATGTTACCTGTGAATTTCTAAGCTGCCTGTACGGCAGTGAACGCCAACTTTCACAGCCTTTGCAAGATTGTTCCTTTCTAAGCTGCCTGTACGGCAGTGAACGTTCGCTGCAACCGCTAGCCAAGACGGTAGGTTTTTCTAAGCTGCCTGTACGGCAGTGAACT

>NZ_CP047658|7|7|3095024-3095228|CRISPRCasFinder
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP047658|7|4|3095024-3095228|CRT
CATTTTATCTGTCTGTACGGCAGTGAAC	ATGGTGGGTGGAGTATGTTACCTGTGAA
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GCCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAAC	GTTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAAC

>NZ_CP047658|7|4|3095080-3095229|PILER-CR
TTTCTAAGCTGCCTGTACGGCAGTGAACG	CCAACTTTCACAGCCTTTGCAAGATTGTTCC
TTTCTAAGCTGCCTGTACGGCAGTGAACG	TTCGCTGCAACCGCTAGCCAAGACGGTAGGTT
TTTCTAAGCTGCCTGTACGGCAGTGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_000410785.1\|3098387_3098612_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|77494
NZ_CP047658.1\|WP_000599802.1\|3102846_3104505_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP047658.1\|WP_001202189.1\|3091668_3093390_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP047658.1\|WP_000520781.1\|3097744_3098065_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP047658.1\|WP_000458809.1\|3107162_3108815_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP047658.1\|WP_001380339.1\|3101893_3102850_+\|DUF535-domain-containing-protein	unknown	unknown	gnl\|CDD\|225537
NZ_CP047658.1\|WP_001338421.1\|3106119_3107019_+\|L-lysine-exporter-LysO	unknown	unknown	gnl\|CDD\|225287
NZ_CP047658.1\|WP_000886683.1\|3080147_3081440_-\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP047658.1\|WP_001298299.1\|3104929_3105625_+\|aquaporin-Z	unknown	unknown	gnl\|CDD\|235453
NZ_CP047658.1\|WP_074478110.1\|3089901_3091668_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	unknown	unknown	gnl\|CDD\|236870
NZ_CP047658.1\|WP_000934041.1\|3095437_3097714_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828
NZ_CP047658.1\|WP_000067752.1\|3081530_3082874_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP047658.1\|WP_000228473.1\|3087774_3088269_-\|leucine-responsive-transcriptional-regulator-Lrp	unknown	unknown	gnl\|CDD\|183009
NZ_CP047658.1\|WP_001241678.1\|3093431_3094136_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP047658.1\|WP_000188180.1\|3098684_3100631_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	unknown	unknown	gnl\|CDD\|182528
NZ_CP047658.1\|WP_001040187.1\|3094420_3094639_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP047658.1\|WP_000537418.1\|3088813_3089779_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|182343
NZ_CP047658.1\|WP_000746460.1\|3100627_3101743_-\|macrolide-transporter-subunit-MacA	unknown	unknown	gnl\|CDD\|183211
NZ_CP047658.1\|WP_000077038.1\|3083650_3087640_-\|DNA-translocase-FtsK	unknown	unknown	gnl\|CDD\|236669
NZ_CP047658.1\|WP_001295343.1\|3082884_3083496_-\|outer-membrane-lipoprotein-chaperone-LolA	unknown	unknown	gnl\|CDD\|129638

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_000410785.1\|3098387_3098612_+\|cold-shock-like-protein-CspD	gnl\|CDD\|77494	PRK09937, PRK09937, cold shock-like protein CspD.	1.48016e-47
NZ_CP047658.1\|WP_000599802.1\|3102846_3104505_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	0
NZ_CP047658.1\|WP_001202189.1\|3091668_3093390_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP047658.1\|WP_000520781.1\|3097744_3098065_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	2.48686e-49
NZ_CP047658.1\|WP_000458809.1\|3107162_3108815_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP047658.1\|WP_001380339.1\|3101893_3102850_+\|DUF535-domain-containing-protein	gnl\|CDD\|225537	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown].	9.34941e-132
NZ_CP047658.1\|WP_001338421.1\|3106119_3107019_+\|L-lysine-exporter-LysO	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	4.37433e-118
NZ_CP047658.1\|WP_000886683.1\|3080147_3081440_-\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP047658.1\|WP_001298299.1\|3104929_3105625_+\|aquaporin-Z	gnl\|CDD\|235453	PRK05420, PRK05420, aquaporin Z; Provisional.	2.04944e-144
NZ_CP047658.1\|WP_074478110.1\|3089901_3091668_+\|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD	gnl\|CDD\|236870	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP047658.1\|WP_000934041.1\|3095437_3097714_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0
NZ_CP047658.1\|WP_000067752.1\|3081530_3082874_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP047658.1\|WP_000228473.1\|3087774_3088269_-\|leucine-responsive-transcriptional-regulator-Lrp	gnl\|CDD\|183009	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp.	5.32926e-117
NZ_CP047658.1\|WP_001241678.1\|3093431_3094136_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	3.45002e-139
NZ_CP047658.1\|WP_000188180.1\|3098684_3100631_-\|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	0
NZ_CP047658.1\|WP_001040187.1\|3094420_3094639_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	8.41354e-49
NZ_CP047658.1\|WP_000537418.1\|3088813_3089779_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|182343	PRK10262, PRK10262, thioredoxin reductase; Provisional.	0
NZ_CP047658.1\|WP_000746460.1\|3100627_3101743_-\|macrolide-transporter-subunit-MacA	gnl\|CDD\|183211	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional.	0
NZ_CP047658.1\|WP_000077038.1\|3083650_3087640_-\|DNA-translocase-FtsK	gnl\|CDD\|236669	PRK10263, PRK10263, DNA translocase FtsK; Provisional.	0
NZ_CP047658.1\|WP_001295343.1\|3082884_3083496_-\|outer-membrane-lipoprotein-chaperone-LolA	gnl\|CDD\|129638	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA. This protein, LolA, is known so far only in the gamma and beta subdivisions of the Proteobacteria. The E. coli major outer lipoprotein (Lpp) of E. coli is released from the inner membrane as a complex with this chaperone in an energy-requiring process, and is then delivered to LolB for insertion into the outer membrane. LolA is involved in the delivery of lipoproteins generally, rather than just Lpp, and is an essential protein in E. coli, unlike Lpp itself. [Protein fate, Protein and peptide secretion and trafficking].	1.48786e-125

>NZ_CP047658.1|WP_001040187.1|3094420_3094639_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP047658.1|WP_001241678.1|3093431_3094136_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQRGIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGCASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFSRMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGRLPNNFWVPRCLFSPQE
>NZ_CP047658.1|WP_001202189.1|3091668_3093390_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLSASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSKLLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMVVTIGLSFLDFTLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVADRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDPQQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQGL
>NZ_CP047658.1|WP_074478110.1|3089901_3091668_+|cysteine/glutathione-ABC-transporter-permease/ATP-binding-protein-CydD
MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWFMARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMVLVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELALTDPLTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDASEQELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATLLAHRQEEI
>NZ_CP047658.1|WP_000537418.1|3088813_3089779_+|thioredoxin-disulfide-reductase
MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK
>NZ_CP047658.1|WP_000228473.1|3087774_3088269_-|leucine-responsive-transcriptional-regulator-Lrp
MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTPCLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEEIQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLVIKTR
>NZ_CP047658.1|WP_000077038.1|3083650_3087640_-|DNA-translocase-FtsK
MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSFNPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQSSDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYEDDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDDEEITYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPVIAPAPEGYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPPVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRIRVPTRRELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDFEFSPMKALLDDGPHEPLFTPIVEPVQQPQQPVAPQQQYQQPQQPVPPQPQYQQPQQPVAPQPQYQQPQQPVAPQQQYQQPQQPVAPQQQYQQPQQPVAPQPQDTLLHPLLMRNGDSRPLHKPTTPLPSLDLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGVKAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRDNPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNLAGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKKVEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILDQAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSDSESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEAQGIVSEQGHNGNREVLAPPPFD
>NZ_CP047658.1|WP_001295343.1|3082884_3083496_-|outer-membrane-lipoprotein-chaperone-LolA
MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWLKDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQFSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK
>NZ_CP047658.1|WP_000067752.1|3081530_3082874_-|replication-associated-recombination-protein-A
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVYLLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRDAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
>NZ_CP047658.1|WP_000886683.1|3080147_3081440_-|serine--tRNA-ligase
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG
>NZ_CP047658.1|WP_000934041.1|3095437_3097714_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAEAAH
>NZ_CP047658.1|WP_000520781.1|3097744_3098065_-|ATP-dependent-Clp-protease-adapter-ClpS
MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKA
>NZ_CP047658.1|WP_000410785.1|3098387_3098612_+|cold-shock-like-protein-CspD
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA
>NZ_CP047658.1|WP_000188180.1|3098684_3100631_-|macrolide-ABC-transporter-ATP-binding-protein/permease-MacB
MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE
>NZ_CP047658.1|WP_000746460.1|3100627_3101743_-|macrolide-transporter-subunit-MacA
MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETREREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ
>NZ_CP047658.1|WP_001380339.1|3101893_3102850_+|DUF535-domain-containing-protein
MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQKFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEALRYHYALLRECMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLELTMMISMDKEGDSTILFRNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVMEAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHYRLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG
>NZ_CP047658.1|WP_000599802.1|3102846_3104505_-|ATP-dependent-endonuclease
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTPCTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLRDARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEHYFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQAKGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVEHVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWVINELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATVRSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRMAQIPENVPMNLRKIISKAIHRSSKPDLAIEVAMEAGRRGVDSVPTLLKKMFSRVLWLARGRAD
>NZ_CP047658.1|WP_001298299.1|3104929_3105625_+|aquaporin-Z
MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATDKFAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEKRD
>NZ_CP047658.1|WP_001338421.1|3106119_3107019_+|L-lysine-exporter-LysO
MFSGLLIILVPLIVGYLIPLRQKAALKVINQLLSWMVYLILFFMGISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRIAMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQIVLNRRGMIVAVVVVASSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAFFSA
>NZ_CP047658.1|WP_000458809.1|3107162_3108815_+|hydroxylamine-reductase
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSILDAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGAYDDRIWTRSIVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLLGGCDGARGERHYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_8

3215302-3215446

Orphan

Consensus_repeat	Method
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_8

>merge|NZ_CP047658|8|3215302-3215446|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGCTGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTCGTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

>NZ_CP047658|8|8|3215302-3215446|CRISPRCasFinder
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	TGCGAAAATGCCTTATCTGGCCTACAGATTCGATGCGATTC
GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGAATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_000815435.1\|3221652_3222648_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP047658.1\|WP_000042533.1\|3205686_3207708_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP047658.1\|WP_074478665.1\|3217913_3219347_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP047658.1\|WP_000118797.1\|3209698_3210853_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP047658.1\|WP_001295301.1\|3203200_3204190_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP047658.1\|WP_000723652.1\|3219422_3220475_-\|4-oxalomesaconate-tautomerase	unknown	unknown	gnl\|CDD\|380230
NZ_CP047658.1\|WP_000604034.1\|3224682_3225372_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP047658.1\|WP_000891515.1\|3226311_3226461_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	unknown	unknown	gnl\|CDD\|371231
NZ_CP047658.1\|WP_000679972.1\|3220658_3221612_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176131
NZ_CP047658.1\|WP_000951213.1\|3210849_3211890_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP047658.1\|WP_001300666.1\|3222802_3223621_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP047658.1\|WP_001091587.1\|3213952_3215236_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP047658.1\|WP_000767389.1\|3213324_3213801_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP047658.1\|WP_000101984.1\|3225371_3226145_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP047658.1\|WP_000044843.1\|3208286_3208964_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP047658.1\|WP_000891692.1\|3223621_3224680_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP047658.1\|WP_001295302.1\|3204586_3205495_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP047658.1\|WP_001300379.1\|3211976_3213266_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP047658.1\|WP_000246761.1\|3208956_3209712_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP047658.1\|WP_000593964.1\|3215469_3217731_-\|hydratase	unknown	unknown	gnl\|CDD\|183125

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_000815435.1\|3221652_3222648_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_CP047658.1\|WP_000042533.1\|3205686_3207708_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP047658.1\|WP_074478665.1\|3217913_3219347_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP047658.1\|WP_000118797.1\|3209698_3210853_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP047658.1\|WP_001295301.1\|3203200_3204190_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	0
NZ_CP047658.1\|WP_000723652.1\|3219422_3220475_-\|4-oxalomesaconate-tautomerase	gnl\|CDD\|380230	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase.	0
NZ_CP047658.1\|WP_000604034.1\|3224682_3225372_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.41762e-146
NZ_CP047658.1\|WP_000891515.1\|3226311_3226461_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	1.04381e-17
NZ_CP047658.1\|WP_000679972.1\|3220658_3221612_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176131	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.09679e-82
NZ_CP047658.1\|WP_000951213.1\|3210849_3211890_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP047658.1\|WP_001300666.1\|3222802_3223621_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP047658.1\|WP_001091587.1\|3213952_3215236_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP047658.1\|WP_000767389.1\|3213324_3213801_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	1.08182e-118
NZ_CP047658.1\|WP_000101984.1\|3225371_3226145_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	0
NZ_CP047658.1\|WP_000044843.1\|3208286_3208964_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	3.39733e-110
NZ_CP047658.1\|WP_000891692.1\|3223621_3224680_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP047658.1\|WP_001295302.1\|3204586_3205495_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	2.22556e-139
NZ_CP047658.1\|WP_001300379.1\|3211976_3213266_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP047658.1\|WP_000246761.1\|3208956_3209712_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	7.9121e-172
NZ_CP047658.1\|WP_000593964.1\|3215469_3217731_-\|hydratase	gnl\|CDD\|183125	PRK11413, PRK11413, putative hydratase; Provisional.	0

>NZ_CP047658.1|WP_001091587.1|3213952_3215236_+|putative-acyl-CoA-thioester-hydrolase
MNTFSVSRLALALAFGVTLTACSSTPPDQRPSDQTAPGTSSRPILSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPEFVVGPAGTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDDNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK
>NZ_CP047658.1|WP_000767389.1|3213324_3213801_+|kinase-inhibitor
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
>NZ_CP047658.1|WP_001300379.1|3211976_3213266_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTTDDLAFDQRHIWHPYTSMTSPLPVYPVASAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ
>NZ_CP047658.1|WP_000951213.1|3210849_3211890_-|biotin-synthase-BioB
MAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTDEYYNAAAL
>NZ_CP047658.1|WP_000118797.1|3209698_3210853_-|8-amino-7-oxononanoate-synthase
MSWQDKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNFSSNDYLGLSHHPQIIRAWKQSAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG
>NZ_CP047658.1|WP_000246761.1|3208956_3209712_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
>NZ_CP047658.1|WP_000044843.1|3208286_3208964_-|ATP-dependent-dethiobiotin-synthetase-BioD
MSKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL
>NZ_CP047658.1|WP_000042533.1|3205686_3207708_-|excinuclease-ABC-subunit-B
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP047658.1|WP_001295302.1|3204586_3205495_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
>NZ_CP047658.1|WP_001295301.1|3203200_3204190_-|GTP-3',8-cyclase-MoaA
MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNKGFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNGYRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVKVNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELLRRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLFGEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG
>NZ_CP047658.1|WP_000593964.1|3215469_3217731_-|hydratase
MIKLSEKGVFLASNNEIIAEEHFTREIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEVGDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFNKNRQM
>NZ_CP047658.1|WP_074478665.1|3217913_3219347_-|anion-permease
MNKKSLWKLILILAIPCIIGFMPAPAGLSELAWVLFGIYLAAIVGLVIKPFPEPVVLLIAVAASMVVVGNLSDGAFKTTAVLSGYSSGTTWLVFSAFTLSAAFVTTGLGKRIAYLLIGKIGNTTLGLGYVTVFLDLVLAPATPSNTARAGGIVLPIINSVAVALGSEPEKSPRRVGHYLMMSIYMVTKTTSYMFFTAMAGNILALKMINDILHLQISWGGWALAAGLPGIIMLLVTPLVIYTMYPPEIKKVDNKTIAKAGLAELGPMKIREKMLLGVFVLALLGWIFSKSLGVDESTVAIVVMATMLLLGIVTWEDVVKNKGGWNTLIWYGGIIGLSSLLSKVKFFEWLAEVFKNNLAFDGHGNVAFFVIIFLSIIVRYFFASGSAYIVAMLPVFAMLANVSGAPLMLTALVLLFSNSYGGMVTHYGGAAGPVIFGVGYNDIKSWWLVGAVLTILTFLVHITLGVWWWNMLIGWNML
>NZ_CP047658.1|WP_000723652.1|3219422_3220475_-|4-oxalomesaconate-tautomerase
MKKIPCVMMRGGTSRGAFLLAEHLPEDQTQRDKILMAIMGSGNDLEIDGIGGGNPLTSKVAIISRSSDPRADVDYLFAQVIVHEQRVDTTPNCGNMLSGVGAFAIENGLIAATSPVTRVRIRNVNTGTFIEADVQTPNGVVEYEGSARIDGVPGTAAPVALTFLNAAGTKTGKVFPTDNQIDYFDDVPVTCIDMAMPVVIIPAEYLGKTGYELPAELDADKALLARIESIRLQAGKAMGLGDVSNMVIPKPVLISPAQKGGAINVRYFMPHSCHRALAITGAIAISSSCALEGTVTRQIVPSVGYGNINIEHPSGALDVHLSNEGQDATTLRASVIRTTRKIFSGEVYLP
>NZ_CP047658.1|WP_000679972.1|3220658_3221612_+|LysR-family-transcriptional-regulator
MKHELSSMKAFVILAESSSFNNAAKLLNITQPALTRRIKKMEEDLHIQLFERTTRKVTLTKAGKRLLPEARELIKKFDETLFNIRDMNAYHRGMVTLACIPTAVFYFLPLAIGKFNELYPNIKVRILEQGTNNCMESVLCNESDFGINMNNVTNSSIDFTPLVNEPFVLACRRDHPLAKKQLVEWQELVGYKMIGVRSSSGNRLLIEQQLADKPWKLDWFYEVRHLSTSLGLVEAGLGISALPGLAMPHAPYSSIIGIPLVEPVIRRTLGIIRRKDAVLSPAAERFFALLINLWTDDKDNLWTNIVERQRHALQEIG
>NZ_CP047658.1|WP_000815435.1|3221652_3222648_-|6-phosphogluconolactonase
MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH
>NZ_CP047658.1|WP_001300666.1|3222802_3223621_+|pyridoxal-phosphatase
MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVIKALQLIEMLNEHHIHGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
>NZ_CP047658.1|WP_000891692.1|3223621_3224680_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAISGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMSKSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLDIPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWGSSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELAIKPGLWLYAQIKSVSITA
>NZ_CP047658.1|WP_000604034.1|3224682_3225372_-|molybdate-ABC-transporter-permease-subunit
MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGKALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVMSFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARSLGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEWLARISRERAGR
>NZ_CP047658.1|WP_000101984.1|3225371_3226145_-|molybdate-ABC-transporter-substrate-binding-protein
MARKWLNLFAGAALSFAVAGNALADEGKITVFAAASLTNAMQDIATQFKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTATRQTLLGNSLVVVAPKASVQKDFTIDSKTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKLGAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTIK
>NZ_CP047658.1|WP_000891515.1|3226311_3226461_-|multidrug-efflux-pump-associated-protein,-AcrZ-family
MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQPGQNH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_9

3593793-3593937

Orphan

Consensus_repeat	Method
TTTTGTAGGCCTGATAAGACGCGACAAGCGTCGCATCAGGCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_9

>merge|NZ_CP047658|9|3593793-3593937|CRISPRCasFinder
TTTTGTAGGCCTGATAAGACGCGACAAGCGTCGCATCAGGCATCGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACCTTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

>NZ_CP047658|9|9|3593793-3593937|CRISPRCasFinder
TTTTGTAGGCCTGATAAGACGCGACAAGCGTCGCATCAGGCAT	CGGAGCACTTATTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGTTCTGGCACC
TTTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001009885.1\|3580097_3580679_+\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207
NZ_CP047658.1\|WP_000158153.1\|3598784_3599249_-\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP047658.1\|WP_001221319.1\|3588063_3589266_+\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP047658.1\|WP_000193393.1\|3598083_3598608_-\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153
NZ_CP047658.1\|WP_001295329.1\|3582656_3584030_-\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_CP047658.1\|WP_000893582.1\|3585831_3587127_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_CP047658.1\|WP_000484048.1\|3600194_3601310_-\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_CP047658.1\|WP_122990581.1\|3595982_3596066_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047658.1\|WP_000698907.1\|3589262_3592406_+\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330
NZ_CP047658.1\|WP_000113933.1\|3587184_3587874_-\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_CP047658.1\|WP_000941942.1\|3596551_3596836_-\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_CP047658.1\|WP_001219309.1\|3593960_3594869_-\|fructokinase	unknown	unknown	gnl\|CDD\|236565
NZ_CP047658.1\|WP_000149639.1\|3584105_3585425_-\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331
NZ_CP047658.1\|WP_001298537.1\|3594993_3595905_+\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|225521
NZ_CP047658.1\|WP_001300528.1\|3580683_3582501_-\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_CP047658.1\|WP_001326926.1\|3592531_3593716_+\|MFS-transporter-AraJ	unknown	unknown	gnl\|CDD\|182234
NZ_CP047658.1\|WP_001142439.1\|3597842_3598034_-\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
NZ_CP047658.1\|WP_001295331.1\|3599368_3600178_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP047658.1\|WP_001266503.1\|3578934_3580005_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP047658.1\|WP_001276425.1\|3596907_3597585_-\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001009885.1\|3580097_3580679_+\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	3.03368e-136
NZ_CP047658.1\|WP_000158153.1\|3598784_3599249_-\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	3.53224e-80
NZ_CP047658.1\|WP_001221319.1\|3588063_3589266_+\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP047658.1\|WP_000193393.1\|3598083_3598608_-\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108
NZ_CP047658.1\|WP_001295329.1\|3582656_3584030_-\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP047658.1\|WP_000893582.1\|3585831_3587127_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_CP047658.1\|WP_000484048.1\|3600194_3601310_-\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_CP047658.1\|WP_000698907.1\|3589262_3592406_+\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_CP047658.1\|WP_000113933.1\|3587184_3587874_-\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
NZ_CP047658.1\|WP_000941942.1\|3596551_3596836_-\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
NZ_CP047658.1\|WP_001219309.1\|3593960_3594869_-\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
NZ_CP047658.1\|WP_000149639.1\|3584105_3585425_-\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_CP047658.1\|WP_001298537.1\|3594993_3595905_+\|recombination-associated-protein-RdgC	gnl\|CDD\|225521	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair].	0
NZ_CP047658.1\|WP_001300528.1\|3580683_3582501_-\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_CP047658.1\|WP_001326926.1\|3592531_3593716_+\|MFS-transporter-AraJ	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
NZ_CP047658.1\|WP_001142439.1\|3597842_3598034_-\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
NZ_CP047658.1\|WP_001295331.1\|3599368_3600178_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
NZ_CP047658.1\|WP_001266503.1\|3578934_3580005_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP047658.1\|WP_001276425.1\|3596907_3597585_-\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	1.41906e-119

>NZ_CP047658.1|WP_001326926.1|3592531_3593716_+|MFS-transporter-AraJ
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>NZ_CP047658.1|WP_000698907.1|3589262_3592406_+|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>NZ_CP047658.1|WP_001221319.1|3588063_3589266_+|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
>NZ_CP047658.1|WP_000113933.1|3587184_3587874_-|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>NZ_CP047658.1|WP_000893582.1|3585831_3587127_-|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASITGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>NZ_CP047658.1|WP_000149639.1|3584105_3585425_-|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>NZ_CP047658.1|WP_001295329.1|3582656_3584030_-|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>NZ_CP047658.1|WP_001300528.1|3580683_3582501_-|maltodextrin-glucosidase
MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWSMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>NZ_CP047658.1|WP_001009885.1|3580097_3580679_+|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>NZ_CP047658.1|WP_001266503.1|3578934_3580005_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE
>NZ_CP047658.1|WP_001219309.1|3593960_3594869_-|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>NZ_CP047658.1|WP_001298537.1|3594993_3595905_+|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>NZ_CP047658.1|WP_122990581.1|3595982_3596066_-|hypothetical-protein
MTQRSWSKLQRKTHNIAALKIIARRSE
>NZ_CP047658.1|WP_000941942.1|3596551_3596836_-|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>NZ_CP047658.1|WP_001276425.1|3596907_3597585_-|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNRGYDVIILMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>NZ_CP047658.1|WP_001142439.1|3597842_3598034_-|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>NZ_CP047658.1|WP_000193393.1|3598083_3598608_-|shikimate-kinase-AroL
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>NZ_CP047658.1|WP_000158153.1|3598784_3599249_-|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAAINPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRGQM
>NZ_CP047658.1|WP_001295331.1|3599368_3600178_+|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>NZ_CP047658.1|WP_000484048.1|3600194_3601310_-|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_10

3781418-3781514

Orphan

Consensus_repeat	Method
GCCAGCGTCGCATCAGGCATCCGCGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_10

>merge|NZ_CP047658|10|3781418-3781514|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCACAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGCGCCAGCGTCGCATCAGGCATCTGCGCA

>NZ_CP047658|10|10|3781418-3781514|CRISPRCasFinder
GCCAGCGTCGCATCAGGCATCCGCGCA	CAATTGCCGGATGCGGCACAAGTTTGTAGGCACGATAAGACGC
GCCAGCGTCGCATCAGGCATCTGCGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001292198.1\|3773699_3774686_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP047658.1\|WP_001118040.1\|3789462_3790233_+\|2-oxoglutaramate-amidase	unknown	unknown	gnl\|CDD\|182461
NZ_CP047658.1\|WP_001140809.1\|3779208_3781302_+\|flagellar-type-III-secretion-system-protein-FlhA	unknown	unknown	gnl\|CDD\|224217
NZ_CP047658.1\|WP_000333379.1\|3784557_3785325_-\|class-II-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|372525
NZ_CP047658.1\|WP_000785665.1\|3778085_3779225_+\|flagellar-type-III-secretion-system-protein-FlhB	unknown	unknown	gnl\|CDD\|235569
NZ_CP047658.1\|WP_000532698.1\|3788835_3789309_-\|C-lysozyme-inhibitor	unknown	unknown	gnl\|CDD\|182187
NZ_CP047658.1\|WP_000831221.1\|3776284_3777037_+\|flagellar-type-III-secretion-system-pore-protein-FliP	unknown	unknown	gnl\|CDD\|235566
NZ_CP047658.1\|WP_000284050.1\|3785530_3786109_-\|D-sedoheptulose-7-phosphate-isomerase	unknown	unknown	gnl\|CDD\|179012
NZ_CP047658.1\|WP_001353765.1\|3782190_3782964_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|223862
NZ_CP047658.1\|WP_001225679.1\|3783846_3784587_+\|murein-L,D-transpeptidase	unknown	unknown	gnl\|CDD\|225577
NZ_CP047658.1\|WP_000958542.1\|3777039_3777312_+\|flagellar-type-III-secretion-system-protein-FliQ	unknown	unknown	gnl\|CDD\|224898
NZ_CP047658.1\|WP_001260502.1\|3777313_3778096_+\|flagellar-biosynthetic-protein-FliR	unknown	unknown	gnl\|CDD\|224598
NZ_CP047658.1\|WP_000922501.1\|3775072_3775924_+\|FliM/FliN-family-flagellar-motor-switch-protein	unknown	unknown	gnl\|CDD\|376445
NZ_CP047658.1\|WP_000729704.1\|3783149_3783410_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	unknown	unknown	gnl\|CDD\|225619
NZ_CP047658.1\|WP_000993676.1\|3771692_3773339_-\|flagellar-M-ring-protein-FliF	unknown	unknown	gnl\|CDD\|235957
NZ_CP047658.1\|WP_000006261.1\|3781517_3782015_-\|REP-associated-tyrosine-transposase-RayT	unknown	unknown	gnl\|CDD\|224854
NZ_CP047658.1\|WP_000029090.1\|3773343_3773685_-\|flagellar-hook-basal-body-complex-protein-FliE	unknown	unknown	gnl\|CDD\|376721
NZ_CP047658.1\|WP_000043127.1\|3775916_3776288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131533
NZ_CP047658.1\|WP_000973083.1\|3786348_3788793_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236528
NZ_CP047658.1\|WP_000615979.1\|3783412_3783691_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	unknown	unknown	gnl\|CDD\|225583

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001292198.1\|3773699_3774686_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	5.5121e-121
NZ_CP047658.1\|WP_001118040.1\|3789462_3790233_+\|2-oxoglutaramate-amidase	gnl\|CDD\|182461	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional.	0
NZ_CP047658.1\|WP_001140809.1\|3779208_3781302_+\|flagellar-type-III-secretion-system-protein-FlhA	gnl\|CDD\|224217	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP047658.1\|WP_000333379.1\|3784557_3785325_-\|class-II-glutamine-amidotransferase	gnl\|CDD\|372525	pfam13230, GATase_4, Glutamine amidotransferases class-II. This family captures members that are not found in pfam00310.	1.1374e-145
NZ_CP047658.1\|WP_000785665.1\|3778085_3779225_+\|flagellar-type-III-secretion-system-protein-FlhB	gnl\|CDD\|235569	PRK05702, flhB, flagellar type III secretion system protein FlhB.	9.14643e-158
NZ_CP047658.1\|WP_000532698.1\|3788835_3789309_-\|C-lysozyme-inhibitor	gnl\|CDD\|182187	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional.	9.39999e-93
NZ_CP047658.1\|WP_000831221.1\|3776284_3777037_+\|flagellar-type-III-secretion-system-pore-protein-FliP	gnl\|CDD\|235566	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed.	3.04304e-107
NZ_CP047658.1\|WP_000284050.1\|3785530_3786109_-\|D-sedoheptulose-7-phosphate-isomerase	gnl\|CDD\|179012	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase.	1.61173e-142
NZ_CP047658.1\|WP_001353765.1\|3782190_3782964_-\|C40-family-peptidase	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	1.91548e-41
NZ_CP047658.1\|WP_001225679.1\|3783846_3784587_+\|murein-L,D-transpeptidase	gnl\|CDD\|225577	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown].	1.07529e-116
NZ_CP047658.1\|WP_000958542.1\|3777039_3777312_+\|flagellar-type-III-secretion-system-protein-FliQ	gnl\|CDD\|224898	COG1987, FliQ, Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion].	1.3006e-18
NZ_CP047658.1\|WP_001260502.1\|3777313_3778096_+\|flagellar-biosynthetic-protein-FliR	gnl\|CDD\|224598	COG1684, FliR, Flagellar biosynthesis pathway, component FliR [Cell motility and secretion / Intracellular trafficking and secretion].	9.23884e-50
NZ_CP047658.1\|WP_000922501.1\|3775072_3775924_+\|FliM/FliN-family-flagellar-motor-switch-protein	gnl\|CDD\|376445	pfam01052, FliMN_C, Type III flagellar switch regulator (C-ring) FliN C-term. This family includes the C-terminal region of flagellar motor switch proteins FliN and FliM. It is associated with family FliM, pfam02154 and family FliN_N pfam16973.	7.73036e-05
NZ_CP047658.1\|WP_000729704.1\|3783149_3783410_+\|type-II-toxin-antitoxin-system-antitoxin-DinJ	gnl\|CDD\|225619	COG3077, RelB, DNA-damage-inducible protein J [DNA replication, recombination, and repair].	4.04445e-29
NZ_CP047658.1\|WP_000993676.1\|3771692_3773339_-\|flagellar-M-ring-protein-FliF	gnl\|CDD\|235957	PRK07193, fliF, flagellar MS-ring protein; Reviewed.	0
NZ_CP047658.1\|WP_000006261.1\|3781517_3782015_-\|REP-associated-tyrosine-transposase-RayT	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.09955e-43
NZ_CP047658.1\|WP_000029090.1\|3773343_3773685_-\|flagellar-hook-basal-body-complex-protein-FliE	gnl\|CDD\|376721	pfam02049, FliE, Flagellar hook-basal body complex protein FliE.	1.16385e-15
NZ_CP047658.1\|WP_000043127.1\|3775916_3776288_+\|hypothetical-protein	gnl\|CDD\|131533	TIGR02480, Flagellar_motor_switch_protein_FliN, flagellar motor switch protein FliN. Proteins that consist largely of the domain described by this model for this protein family can be designated flagellar motor switch protein FliN. Longer proteins in which this region is a C-terminal domain typically are designated FliY. More distantly related sequences, outside the scope of this family, are associated with type III secretion and include the surface presentation of antigens protein SpaO required or invasion of host cells by Salmonella enterica. [Cellular processes, Chemotaxis and motility].	4.17066e-21
NZ_CP047658.1\|WP_000973083.1\|3786348_3788793_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|236528	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed.	0
NZ_CP047658.1\|WP_000615979.1\|3783412_3783691_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ	gnl\|CDD\|225583	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown].	8.29074e-42

>NZ_CP047658.1|WP_001140809.1|3779208_3781302_+|flagellar-type-III-secretion-system-protein-FlhA
MAKTTKSFLALLRGGNLGVPLVILCILAMVILPLPPALLDILFTFNIVLAVMVLLVAVSAKRPLEFSLFPTILLITTLMRLTLNVASTRVVLLHGHLGAGAAGKVIESFGQVVIGGNFVVGFVVFIILMIINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRHQLLASPSVLYTATGIMFVLAMVPGMPHLPFLLFSALLGFTGWRMSKRPQAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVLGNDPAYGMPVTWIQPAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLASMAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSAVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM
>NZ_CP047658.1|WP_000785665.1|3778085_3779225_+|flagellar-type-III-secretion-system-protein-FlhB
MADSSSEEKTEKPSAQKLRKAREEGQLPRSKDMGLAASLFAAFVVISSSFPWYADFVRESFISVHQYAQEINNPQVIGQFLRHHLLILGKFILTLLPMPAAALLSSLVPGGWLFLPKKILPDFSKISPLKGIGRLFSSEHLAETGKMTVKSVVVLVMLWISLRNNFAAFLGLQALPFKLAMNEGLSLYASVMRNFVILFIFFALLDVPLAKALFTKGLKMTKQELKEEYKNQEGKPEVKARVRRLQRQLAMGQIRKVVPKANVVITNPTHYAVALQYDQSRAAAPFVVAKGTDEIALYIRQVAAENQVEVVEFPRLARSVYYTTQVNQQIPFQLYRAIAHVLTYVLQMKHWREGAQPRPALNRDISIPKEVLKLDGENN
>NZ_CP047658.1|WP_001260502.1|3777313_3778096_+|flagellar-biosynthetic-protein-FliR
MRTSDVTQLMDLALGLWFPFVRIMAFLRYVPVLDNSALTVRVRIILSLALAIIITPLIPHPIPHDLLSLNSLILTVEQILWGMLFGLMFQFLFLALQLAGQILSFNMGMSMAVMNDPSSGASTTVLAELINVYAILLFFAMDGHLLLVSVLFKGFTYWPIGNALHPQTLRTIALAFSWVLASASLLALPTTFIMLIVQGCFGLLNRIAPPLNLFSLGFPINMLAGLVCFATLLYNLPDHYLHLANFVLQQLDALKGHYGG
>NZ_CP047658.1|WP_000958542.1|3777039_3777312_+|flagellar-type-III-secretion-system-protein-FliQ
MLTVDVAADIVASGIKVVILLVSVLVVPSLLVGLLVSVFQAVTQINEQTLSFLPRLIVTLVVLGVCGKWMIIQLHDLCIHLFTQAALLVH
>NZ_CP047658.1|WP_000831221.1|3776284_3777037_+|flagellar-type-III-secretion-system-pore-protein-FliP
MKRSTQLTLGLGLLALAPLAIAQGGDIALLNVVTHGNTQEYSVKIQVLILMTLVGLLPTMVLMMTCFTRFIIVLSLLRQALGLQQTPPNRILIGIALSLTMLVMRPIWLNIYDHAVVPFENDRITLTDALSTAATPLKRFMLAQTDKKAMAQIMTIGGAKGNAADQDLSIVVPAYVLSELKTAFQIGFMIYIPFLVIDLIVASVLMAMGMMMLSPLIVSLPFKLMLFVLIDGWSLTIGTLTTSIRGLGLG
>NZ_CP047658.1|WP_000043127.1|3775916_3776288_+|hypothetical-protein
MSKQEDILAGDFGLTDEVAPVAKSADAETLVTRLEDRFSDSMTLLKRIPVTLTLEVSSVEIMLADLLNIDDDTVIELDKLAGEPLDIKVNNILLGKAEVVVVNEKYGLRVLEFNTRDINDLAP
>NZ_CP047658.1|WP_000922501.1|3775072_3775924_+|FliM/FliN-family-flagellar-motor-switch-protein
MLKYSKTPGIFKLEGNRLGRPYHHLPTLFTGNFDVIDSHLGSYFLKKHRSNITLKKIGCEMDIINKNAELMVSQVGHLAFDIDRSLLLMLLGNFYGLESSLEEAKAHNGLPTKTETRLKNRLALDICTLIFNLQTSGIALKLKLDSSTVITHWAYQLTFTLAGDEESCFRILLDDAHTDFILNLIRHSEHSKPQQVAKSVNKPALIKEIIRSLPLTLNVKIAELSMNVADLTQIKAGDILPISLGETFPVAIGQSELFSALIVEDKDKLFLSELAGKNENSHE
>NZ_CP047658.1|WP_001292198.1|3773699_3774686_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENDNAPYIGVNCAAIPENMLEATLFGYDKGAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQLVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFREDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGVIYLDALGLPENDIADRSELQWPVQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMRKQGIEVFS
>NZ_CP047658.1|WP_000029090.1|3773343_3773685_-|flagellar-hook-basal-body-complex-protein-FliE
MSITTINSTMQAQIMQDVQRMQANAQAPVLPAMTFSSTNPDVSFNRIMSGALGHVDQFQQVAEQQQTAIDTGKSDDLAGAMIASQQASLSFSALVQVRNKIATGFNDLMSMSI
>NZ_CP047658.1|WP_000993676.1|3771692_3773339_-|flagellar-M-ring-protein-FliF
MNAQIKKLTQAFPAFRLRLADNKRWALMAGVGLAVAATAIIVSVLWTGNRGYVSLYGRQENLPVSQIVTVLDGEKLSYRIDPQSGQILVPEDELSKTRMTLAAKGVQAILPSGYELMDKDEVLGSSQFMQNVRYKRSLEGELAQSIMSLDAVESARVHLALNEESSFVVSDEPQNSASVVVRLHYGAKLNMDQVNAIVHLVSGSIPGLQASKVSVVDQAGNLLTDGIGAGEAVSAATRKRDQILKDIQDKTRASVANVLDSLVGSRNYRVSVMPDLDLSTIDETQEHYGDAPKINREESVLDSDTNQVAMGVPGSLSNRPPVAANQMTNGTEENRSPEALSKHSESKRDYSYDRSVQHIQHPGFAVKRLNVAVVLNQNAPALKNWKPEQTTQLTALLNNAAGIDAQRGDNLTLSLLNFVPQVVPVEPVIPLWKDDSVLAWVRLIGCGLLALLLLFFVVRPVMKRLTAVRAPVITPEPEAVSEPWIAMPEEERKNVDLPSLPGDDSLPSQSSGLEVKLEFLQKLAMSDTDRVAEVLRQWITSNERIDNK
>NZ_CP047658.1|WP_000006261.1|3781517_3782015_-|REP-associated-tyrosine-transposase-RayT
MSEYRRYYIKGGTWFFTVNLRNRRSQLLTTQYQMLRNAIIKVKRDRPFEINAWVVLPEHMHCIWTLPEGDDDFSSRWREIKKQFTHACGLKNIWQPRFWEHTIRNTKDYRHHVDYIYINPVKHGWVKQVSDWPFSTFHRDVERGLYPIDWAGDVTDINAGERIIL
>NZ_CP047658.1|WP_001353765.1|3782190_3782964_-|C40-family-peptidase
MHDQPLLRMSLPSIPSFVLSGLLLLCLPFSSFASATTSHISFSYAARQRMQNRARLLKQYQTHLKKQASYIVEGNAESRRALRQHNREQIKQHPEWFPAPLKASDRRWQALVENNHFLSSDHLHNITEVAIHRLEQQLGKPYVWGGTRPDQGFDCSGLVFYAYNKILEAKLPRTANEMYHYRRATIVANNDLRRGDLLFFHIHSREIADHMGVYLGDGQFIESPRTGETIRVSRLAEPFWQDHFLGARRILTEETIL
>NZ_CP047658.1|WP_000729704.1|3783149_3783410_+|type-II-toxin-antitoxin-system-antitoxin-DinJ
MAANAFVRARIDEDLKNQAADVLAGMGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKNSEAGVDVHKAKDADDLFDKLGI
>NZ_CP047658.1|WP_000615979.1|3783412_3783691_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin-YafQ
MIQRDIEYSGQFSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
>NZ_CP047658.1|WP_001225679.1|3783846_3784587_+|murein-L,D-transpeptidase
MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPVYIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQLKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTGALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVNGRYVVSKPLSHEVVQPQLASNYTLPEAK
>NZ_CP047658.1|WP_000333379.1|3784557_3785325_-|class-II-glutamine-amidotransferase
MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGKGCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRNWTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIASLADELRAKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTTPNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV
>NZ_CP047658.1|WP_000284050.1|3785530_3786109_-|D-sedoheptulose-7-phosphate-isomerase
MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAGGKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPHFGYADRIQEIHIKVIHILIQLIEKEMVK
>NZ_CP047658.1|WP_000973083.1|3786348_3788793_+|acyl-CoA-dehydrogenase
MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWSAWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDLFQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLKEHRFFAMIIKKEYGGLEFSAYAQSRVLQKLSGVSGILAITVGVPNSLGPGELLQHYGTDEQKDHYLPRLARGQEIPCFALTSPEAGSDAGAIPDTGIVCMGEWQGQQVLGMRLTWNKRYITLAPIATVLGLAFKLSDPEKLLGGAEDLGITCALIPTTTPGVEIGRRHFPLNVPFQNGPTRGKDVFVPIDYIIGGPKMAGQGWRMLVECLSVGRGITLPSNSTGGVKSVALATGAYAHIRRQFKISIGKMEGIEEPLARIAGNAYVMDAAASLITYGIMLGEKPAVLSAIVKYHCTHRGQQSIIDAMDITGGKGIMLGQSNFLARAYQGAPIAITVEGANILTRSMMIFGQGAIRCHPYVLEEMEAAKNNDVNAFDKLLFKHIGHVGSNKVRSFWLGLTRGLTSSTPTGDATKRYYQHLNRLSANLALLSDVSMAVLGGSLKRRERISARLGDILSQLYLASAVLKRYDDEGRNEADLPLVHWGVQDALYQAEQAMDDLLQNFPNRVVAGLLNVVIFPTGRHYLAPSDKLDHKVAKILQVPNATRSRIGRGQYLTPSEHNPVGLLEEALVDVIAADPIHQRICKELGKNLPFTRLDELAHNALVKGLIDKDEAAILVKAEESRLRSINVDDFDPEELATKPVKLPEKVRKVEAA
>NZ_CP047658.1|WP_000532698.1|3788835_3789309_-|C-lysozyme-inhibitor
MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTKAAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEKSNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK
>NZ_CP047658.1|WP_001118040.1|3789462_3790233_+|2-oxoglutaramate-amidase
MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMFTSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTVHFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLALYVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIATADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047658_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047658_11

3901002-3901133

Orphan

Consensus_repeat	Method
AATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047658_11

>merge|NZ_CP047658|11|3901002-3901133|CRISPRCasFinder
AATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGAGGCAGCGCGTGAGCGCATTCAGTCCGCCTCGCCTGAGCAGCGCCAGGCGGTTCGCGAGAAAATGCAGACTAACCCGCAGAACCAGCAGCGAAGAGA

>NZ_CP047658|11|11|3901002-3901133|CRISPRCasFinder
AATGCAGACTAACCCGCAGATCCAGCAGCGAAGAGA	GGCAGCGCGTGAGCGCATTCAGTCCGCCTCGCCTGAGCAGCGCCAGGCGGTTCGCGAGAA
AATGCAGACTAACCCGCAGAACCAGCAGCGAAGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047658.1\|WP_001295568.1\|3893904_3894252_+\|YacC-family-pilotin-like-protein	unknown	unknown	gnl\|CDD\|370620
NZ_CP047658.1\|WP_000331776.1\|3907963_3908728_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP047658.1\|WP_000963518.1\|3903232_3905125_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP047658.1\|WP_000734287.1\|3895239_3896034_+\|adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|235480
NZ_CP047658.1\|WP_001300407.1\|3901483_3902908_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP047658.1\|WP_000651599.1\|3888151_3888814_+\|carbonate-dehydratase	unknown	unknown	gnl\|CDD\|182460
NZ_CP047658.1\|WP_000150637.1\|3887116_3888043_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP047658.1\|WP_001135174.1\|3912174_3913068_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl\|CDD\|181612
NZ_CP047658.1\|WP_000172005.1\|3910684_3911539_-\|beta-lactamase-regulator-AmpE	unknown	unknown	gnl\|CDD\|374997
NZ_CP047658.1\|WP_000384306.1\|3896070_3896433_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP047658.1\|WP_074477302.1\|3913720_3915106_+\|type-II-secretion-system-protein-GspE	unknown	unknown	gnl\|CDD\|236694
NZ_CP047658.1\|WP_000818411.1\|3894357_3895224_+\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|234843
NZ_CP047658.1\|WP_000003820.1\|3905139_3907803_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP047658.1\|WP_001307570.1\|3896607_3899205_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP047658.1\|WP_001189647.1\|3892188_3893739_-\|multicopper-oxidase-CueO	unknown	unknown	gnl\|CDD\|236810
NZ_CP047658.1\|WP_000683335.1\|3888854_3889391_-\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|185321
NZ_CP047658.1\|WP_000923721.1\|3911535_3912087_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP047658.1\|WP_001297052.1\|3889596_3891987_+\|pyrroloquinoline-quinone-dependent-dehydrogenase	unknown	unknown	gnl\|CDD\|274418
NZ_CP047658.1\|WP_000360904.1\|3913270_3913711_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP047658.1\|WP_000399036.1\|3909271_3910642_+\|aromatic-amino-acid-transporter-AroP	unknown	unknown	gnl\|CDD\|182324

Protein	Function_ID	Function_description	E-value
NZ_CP047658.1\|WP_001295568.1\|3893904_3894252_+\|YacC-family-pilotin-like-protein	gnl\|CDD\|370620	pfam09691, T2SS_PulS_OutS, Type II secretion system pilotin lipoprotein (PulS_OutS). This family comprises lipoproteins from four gamma proteobacterial species: PulS protein of Klebsiella pneumoniae (P20440), the OutS protein of Erwinia chrysanthemi (Q01567) and Pectobacterium chrysanthemi, and the functionally uncharacterized E. coli protein EtpO. PulS and OutS have been shown to interact with and facilitate insertion of secretins into the outer membrane, suggesting a chaperone-like, or piloting function for members of this family. In the pilotin from this four-helix protein from enterohemorrhagic Escherichia coli, the straight helix alpha2, the curved helix alpha3 and the bent helix alpha4 surround the central N-terminal helix alpha1. These helices create a prominent groove, mainly formed by side chains of helices 1,2 and 3 suggesting this groove is important as a binding site.	8.48865e-08
NZ_CP047658.1\|WP_000331776.1\|3907963_3908728_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	2.65103e-167
NZ_CP047658.1\|WP_000963518.1\|3903232_3905125_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP047658.1\|WP_000734287.1\|3895239_3896034_+\|adenosylmethionine-decarboxylase	gnl\|CDD\|235480	PRK05462, PRK05462, adenosylmethionine decarboxylase.	0
NZ_CP047658.1\|WP_001300407.1\|3901483_3902908_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP047658.1\|WP_000651599.1\|3888151_3888814_+\|carbonate-dehydratase	gnl\|CDD\|182460	PRK10437, PRK10437, carbonic anhydrase; Provisional.	2.75383e-171
NZ_CP047658.1\|WP_000150637.1\|3887116_3888043_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.41864e-103
NZ_CP047658.1\|WP_001135174.1\|3912174_3913068_+\|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl\|CDD\|181612	PRK09016, PRK09016, carboxylating nicotinate-nucleotide diphosphorylase.	0
NZ_CP047658.1\|WP_000172005.1\|3910684_3911539_-\|beta-lactamase-regulator-AmpE	gnl\|CDD\|374997	pfam17113, AmpE, Regulatory signalling modulator protein AmpE. AmpE is a family of bacterial regulatory proteins. AmpE in conjunction with AmpD sense the effect of beta-lactam on peptidoglycan synthesis and relay this signal to AmpR. AmpR regulates the production of beta-lactamase.	4.35299e-180
NZ_CP047658.1\|WP_000384306.1\|3896070_3896433_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	3.86085e-68
NZ_CP047658.1\|WP_074477302.1\|3913720_3915106_+\|type-II-secretion-system-protein-GspE	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	0
NZ_CP047658.1\|WP_000818411.1\|3894357_3895224_+\|polyamine-aminopropyltransferase	gnl\|CDD\|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	2.3388e-178
NZ_CP047658.1\|WP_000003820.1\|3905139_3907803_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP047658.1\|WP_001307570.1\|3896607_3899205_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP047658.1\|WP_001189647.1\|3892188_3893739_-\|multicopper-oxidase-CueO	gnl\|CDD\|236810	PRK10965, PRK10965, multicopper oxidase; Provisional.	0
NZ_CP047658.1\|WP_000683335.1\|3888854_3889391_-\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|185321	PRK15423, PRK15423, hypoxanthine phosphoribosyltransferase; Provisional.	6.06525e-121
NZ_CP047658.1\|WP_000923721.1\|3911535_3912087_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	2.22246e-138
NZ_CP047658.1\|WP_001297052.1\|3889596_3891987_+\|pyrroloquinoline-quinone-dependent-dehydrogenase	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP047658.1\|WP_000360904.1\|3913270_3913711_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.85141e-108
NZ_CP047658.1\|WP_000399036.1\|3909271_3910642_+\|aromatic-amino-acid-transporter-AroP	gnl\|CDD\|182324	PRK10238, PRK10238, aromatic amino acid transporter AroP.	0

>NZ_CP047658.1|WP_001307570.1|3896607_3899205_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEFLLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRPALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVGPIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGGKIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDVLIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRACGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVEKKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNIVLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPILCAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPPTRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKADGVIFQTAV
>NZ_CP047658.1|WP_000384306.1|3896070_3896433_-|YacL-family-protein
MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQAAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCGVEDFLQVVAAYRNFVQQK
>NZ_CP047658.1|WP_000734287.1|3895239_3896034_+|adenosylmethionine-decarboxylase
MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYNANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLPETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDIVTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKMLLKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV
>NZ_CP047658.1|WP_000818411.1|3894357_3895224_+|polyamine-aminopropyltransferase
MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALPQYLQDALASQPS
>NZ_CP047658.1|WP_001295568.1|3893904_3894252_+|YacC-family-pilotin-like-protein
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
>NZ_CP047658.1|WP_001189647.1|3892188_3893739_-|multicopper-oxidase-CueO
MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVLMGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV
>NZ_CP047658.1|WP_001297052.1|3889596_3891987_+|pyrroloquinoline-quinone-dependent-dehydrogenase
MAINNTGSRRLLVTLTALFAALCGLYLLIGGGWLVAIGGSWYYPIAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGIWLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPAEAISPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEVTPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPELKTNESFQHVTCRGVSYHEAKAETASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYEPTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSDEHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATTGKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELVVPAPEKPVPQGAAKGDYVTPTQPFSELSFRPTKDLSGADMWGATMFDQLVCRVMFHQMRYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGNPMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEVVWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSNGEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK
>NZ_CP047658.1|WP_000683335.1|3888854_3889391_-|hypoxanthine-phosphoribosyltransferase
MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRGSFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDIIDSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDYAQRYRHLPYIGKVILLDE
>NZ_CP047658.1|WP_000651599.1|3888151_3888814_+|carbonate-dehydratase
MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHANHK
>NZ_CP047658.1|WP_000150637.1|3887116_3888043_-|ABC-transporter-ATP-binding-protein
MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGKSTTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQAGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTSMKALLAKLKSETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLSEQGIQVLSMRNKANRLEELFVSLVNEKQGDRA
>NZ_CP047658.1|WP_001300407.1|3901483_3902908_-|dihydrolipoyl-dehydrogenase
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGVCLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDPRIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDIVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISFETATFPWAASGRAIASDCADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNPKAKKK
>NZ_CP047658.1|WP_000963518.1|3903232_3905125_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAAAAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEIKVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDEVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIRRLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKVDFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAKRKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSDIRRLVM
>NZ_CP047658.1|WP_000003820.1|3905139_3907803_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEARKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDLELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQEQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLKDTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYVREHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIDKKVVADAIAKFNIDADKVNPRLA
>NZ_CP047658.1|WP_000331776.1|3907963_3908728_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLETRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEAAHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAREASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN
>NZ_CP047658.1|WP_000399036.1|3909271_3910642_+|aromatic-amino-acid-transporter-AroP
MEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPVNTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKTAKAVKAH
>NZ_CP047658.1|WP_000172005.1|3910684_3911539_-|beta-lactamase-regulator-AmpE
MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV
>NZ_CP047658.1|WP_000923721.1|3911535_3912087_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDCYPDIAKNMTGHCDIAPDRKTDPGPAFDWARFRVLVSKETT
>NZ_CP047658.1|WP_001135174.1|3912174_3913068_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANNDITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQSLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLRSALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVENLEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVDFISVGALTKHVQALDLSMRFR
>NZ_CP047658.1|WP_000360904.1|3913270_3913711_+|prepilin-peptidase-dependent-pilin
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
>NZ_CP047658.1|WP_074477302.1|3913720_3915106_+|type-II-secretion-system-protein-GspE
MNIPQLTALCLRYHGVLLDASEEVVHVAVVDAPSHELLDALHFATTKRIEITCWTRQQMEGHASRTQQTLPVAVQEKHQPKAELLTRTLQSALEQRASDIHIEPADNAYRIRLRIDGVLHPLPDVSPDAGVALTARLKVLGNLDIAEHRLPQDGQFTVELAGNAVSFRIATLPCRGGEKVVLRLLQQVGQALDVNTLGMQPLQLADFAHALQQPHGLVLVTGPTGSGKTVTLYSALQKLNTADINICSVEDPVEIPIAGLNQTQIHPRAGLTFQGVLRALLRQDPDVIMIGEIRDGETAEIAIKAAQTGHLVLSTLHTNSTCETLVRLQQMGVARWMLSSALTLVIAQRLVRKLCPHCRRQQGEPIHIPDNVWPSPLPHWQAPGCVHCYHGFYGRTALFEVLPITPVIRQLISANTDVESLETHARQAGMRTLFENGCLAVEQGLTTFEELIRVLGMPHGE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047658_6	6.1\|2953267\|40\|NZ_CP047658\|CRISPRCasFinder	2953267-2953306	40	NZ_CP041417	Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence	47951-47990	0	1.0
NZ_CP047658_3	3.6\|1080872\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080872-1080903	32	LC542972	Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence	246937-246968	1	0.969
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	63538-63569	2	0.938
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	MT074430	Salmonella phage pink, complete genome	39944-39975	2	0.938
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	KY709687	Salmonella phage 29485, complete genome	17835-17866	2	0.938
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	NC_022752	Salmonella phage SETP13, complete genome	32901-32932	2	0.938
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	KY176369	Salmonella phage STP03, complete genome	33437-33468	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NZ_CP021720	Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence	108175-108206	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NZ_CP020051	Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence	58913-58944	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	KP869108	Escherichia coli O157 typing phage 10, complete genome	36670-36701	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	KP869107	Escherichia coli O157 typing phage 9, partial genome	36794-36825	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NC_019711	Enterobacteria phage HK629, complete genome	30061-30092	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NC_007804	Escherichia phage phiV10, complete genome	36256-36287	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	DQ126339	Enterobacteria phage phiV10, complete genome	36256-36287	2	0.938
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	MT225100	Escherichia phage Lys8385Vzw, complete genome	29555-29586	2	0.938
NZ_CP047658_5	5.1\|2225607\|38\|NZ_CP047658\|CRISPRCasFinder	2225607-2225644	38	NZ_CP043437	Enterobacter sp. LU1 plasmid unnamed	113727-113764	2	0.947
NZ_CP047658_2	2.3\|1054623\|32\|NZ_CP047658\|CRISPRCasFinder	1054623-1054654	32	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	46242-46273	3	0.906
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NZ_CP042632	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence	38424-38455	3	0.906
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NZ_CP021537	Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence	25662-25693	3	0.906
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	NZ_CP047663	Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence	60243-60274	3	0.906
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	NZ_KY515226	Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence	63538-63571	3	0.912
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	MT074430	Salmonella phage pink, complete genome	39942-39975	3	0.912
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	KY709687	Salmonella phage 29485, complete genome	17835-17868	3	0.912
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	NC_022752	Salmonella phage SETP13, complete genome	32899-32932	3	0.912
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	KY176369	Salmonella phage STP03, complete genome	33437-33470	3	0.912
NZ_CP047658_2	2.13\|1054623\|34\|NZ_CP047658\|PILER-CR,CRT	1054623-1054656	34	CP053410	Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence	46242-46275	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	KP869108	Escherichia coli O157 typing phage 10, complete genome	36670-36703	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	KP869107	Escherichia coli O157 typing phage 9, partial genome	36794-36827	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NC_019711	Enterobacteria phage HK629, complete genome	30061-30094	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	MT225100	Escherichia phage Lys8385Vzw, complete genome	29555-29588	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NZ_CP021720	Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence	108173-108206	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NZ_CP020051	Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence	58911-58944	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NC_007804	Escherichia phage phiV10, complete genome	36254-36287	4	0.882
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	DQ126339	Enterobacteria phage phiV10, complete genome	36254-36287	4	0.882
NZ_CP047658_2	2.7\|1054867\|32\|NZ_CP047658\|CRISPRCasFinder	1054867-1054898	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	632328-632359	5	0.844
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NZ_CP021537	Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence	25662-25695	5	0.853
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NZ_CP042632	Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence	38422-38455	5	0.853
NZ_CP047658_2	2.15\|1054745\|34\|NZ_CP047658\|PILER-CR,CRT	1054745-1054778	34	NZ_CP047663	Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence	60241-60274	5	0.853
NZ_CP047658_1	1.3\|1052540\|32\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052540-1052571	32	MT375042	Acinetobacter phage vB_AbaP_Alexa, complete genome	10578-10609	6	0.812
NZ_CP047658_3	3.2\|1080752\|28\|NZ_CP047658\|PILER-CR	1080752-1080779	28	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1548234-1548261	6	0.786
NZ_CP047658_3	3.4\|1080750\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080750-1080781	32	NZ_CP025114	Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence	241497-241528	6	0.812
NZ_CP047658_3	3.4\|1080750\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080750-1080781	32	NZ_CP044544	Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence	137039-137070	6	0.812
NZ_CP047658_1	1.3\|1052540\|32\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052540-1052571	32	MT708550	Achromobacter phage Mano, complete genome	2350-2381	7	0.781
NZ_CP047658_2	2.10\|1055050\|32\|NZ_CP047658\|CRISPRCasFinder	1055050-1055081	32	KR080197	Mycobacterium phage FlagStaff, complete genome	15476-15507	7	0.781
NZ_CP047658_3	3.2\|1080752\|28\|NZ_CP047658\|PILER-CR	1080752-1080779	28	NC_015184	Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence	120691-120718	7	0.75
NZ_CP047658_3	3.6\|1080872\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080872-1080903	32	MK455769	Aeromonas phage MJG, complete genome	10369-10400	7	0.781
NZ_CP047658_1	1.6\|1052723\|33\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052723-1052755	33	NC_021529	Vibrio phage nt-1, complete genome	92163-92195	8	0.758
NZ_CP047658_1	1.12\|1053090\|32\|NZ_CP047658\|CRT	1053090-1053121	32	NC_012732	Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence	20202-20233	8	0.75
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	HQ634174	Cyanophage MED4-213, complete genome	93296-93327	8	0.75
NZ_CP047658_2	2.7\|1054867\|32\|NZ_CP047658\|CRISPRCasFinder	1054867-1054898	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	460575-460606	8	0.75
NZ_CP047658_2	2.9\|1054989\|32\|NZ_CP047658\|CRISPRCasFinder	1054989-1055020	32	MK814759	Gordonia phage Reyja, complete genome	4467-4498	8	0.75
NZ_CP047658_2	2.10\|1055050\|32\|NZ_CP047658\|CRISPRCasFinder	1055050-1055081	32	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	15418-15449	8	0.75
NZ_CP047658_3	3.1\|1080691\|28\|NZ_CP047658\|PILER-CR	1080691-1080718	28	MN850656	Flavobacterium phage fF4, complete genome	5085-5112	8	0.714
NZ_CP047658_1	1.7\|1052785\|32\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052785-1052816	32	MK693005	Klebsiella phage KPR2, complete genome	32997-33028	9	0.719
NZ_CP047658_1	1.7\|1052785\|32\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052785-1052816	32	NC_031267	Gordonia phage Lucky10, complete genome	11488-11519	9	0.719
NZ_CP047658_1	1.9\|1052907\|32\|NZ_CP047658\|PILER-CR,CRISPRCasFinder,CRT	1052907-1052938	32	NC_008760	Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence	97029-97060	9	0.719
NZ_CP047658_2	2.7\|1054867\|32\|NZ_CP047658\|CRISPRCasFinder	1054867-1054898	32	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	91348-91379	9	0.719
NZ_CP047658_2	2.8\|1054928\|32\|NZ_CP047658\|CRISPRCasFinder	1054928-1054959	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	224876-224907	9	0.719
NZ_CP047658_2	2.10\|1055050\|32\|NZ_CP047658\|CRISPRCasFinder	1055050-1055081	32	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	139210-139241	9	0.719
NZ_CP047658_2	2.17\|1054867\|34\|NZ_CP047658\|PILER-CR,CRT	1054867-1054900	34	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	460575-460608	9	0.735
NZ_CP047658_3	3.4\|1080750\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080750-1080781	32	NZ_CP054028	Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence	1548232-1548263	9	0.719
NZ_CP047658_3	3.6\|1080872\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080872-1080903	32	NC_047954	Pseudomonas phage Njord, complete genome	11435-11466	9	0.719
NZ_CP047658_7	7.3\|3095168\|33\|NZ_CP047658\|CRISPRCasFinder,CRT	3095168-3095200	33	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4203	9	0.727
NZ_CP047658_7	7.5\|3095169\|32\|NZ_CP047658\|PILER-CR	3095169-3095200	32	MN855903	Myoviridae sp. isolate 490, partial genome	4171-4202	9	0.719
NZ_CP047658_10	10.1\|3781445\|43\|NZ_CP047658\|CRISPRCasFinder	3781445-3781487	43	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	4037-4079	9	0.791
NZ_CP047658_10	10.1\|3781445\|43\|NZ_CP047658\|CRISPRCasFinder	3781445-3781487	43	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	4036-4078	9	0.791
NZ_CP047658_10	10.1\|3781445\|43\|NZ_CP047658\|CRISPRCasFinder	3781445-3781487	43	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	4036-4078	9	0.791
NZ_CP047658_10	10.1\|3781445\|43\|NZ_CP047658\|CRISPRCasFinder	3781445-3781487	43	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	4036-4078	9	0.791
NZ_CP047658_2	2.5\|1054745\|32\|NZ_CP047658\|CRISPRCasFinder	1054745-1054776	32	AP014501	Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, * SEQUENCING IN PROGRESS *, 3 ordered pieces	17722-17753	10	0.688
NZ_CP047658_2	2.10\|1055050\|32\|NZ_CP047658\|CRISPRCasFinder	1055050-1055081	32	NZ_CP012383	Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence	14130-14161	10	0.688
NZ_CP047658_2	2.17\|1054867\|34\|NZ_CP047658\|PILER-CR,CRT	1054867-1054900	34	NZ_CP006988	Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence	91346-91379	10	0.706
NZ_CP047658_2	2.20\|1055050\|34\|NZ_CP047658\|PILER-CR,CRT	1055050-1055083	34	NZ_CP014600	Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence	15418-15451	10	0.706
NZ_CP047658_3	3.6\|1080872\|32\|NZ_CP047658\|CRISPRCasFinder,CRT	1080872-1080903	32	NC_047894	Pseudomonas phage uligo, complete genome	11353-11384	10	0.688
NZ_CP047658_9	9.1\|3593836\|59\|NZ_CP047658\|CRISPRCasFinder	3593836-3593894	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
NZ_CP047658_2	2.18\|1054928\|34\|NZ_CP047658\|PILER-CR,CRT	1054928-1054961	34	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	224874-224907	11	0.676
NZ_CP047658_2	2.20\|1055050\|34\|NZ_CP047658\|PILER-CR,CRT	1055050-1055083	34	NZ_CP009292	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	139208-139241	11	0.676
NZ_CP047658_9	9.1\|3593836\|59\|NZ_CP047658\|CRISPRCasFinder	3593836-3593894	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814

1. spacer 6.1|2953267|40|NZ_CP047658|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgctgcgggtcattcttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
****************************************

2. spacer 3.6|1080872|32|NZ_CP047658|CRISPRCasFinder,CRT matches to LC542972 (Escherichia coli IOMTU792 plasmid pIOMTU792 DNA, complete sequence) position: , mismatch: 1, identity: 0.969

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactggatgcgatgatggacatcacttg	Protospacer
***********************.********

3. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 2, identity: 0.938

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagatagagcgctggata	Protospacer
*.***************** ************

4. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to MT074430 (Salmonella phage pink, complete genome) position: , mismatch: 2, identity: 0.938

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagatagagcgctggata	Protospacer
*.***************** ************

5. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 2, identity: 0.938

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagatagagcgctggata	Protospacer
*.***************** ************

6. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to NC_022752 (Salmonella phage SETP13, complete genome) position: , mismatch: 2, identity: 0.938

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagatagagcgctggata	Protospacer
*.***************** ************

7. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to KY176369 (Salmonella phage STP03, complete genome) position: , mismatch: 2, identity: 0.938

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagatagagcgctggata	Protospacer
*.***************** ************

8. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP021720 (Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaatacccgttgctct	Protospacer
****** ****************.********

9. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP020051 (Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaatacccgttgctct	Protospacer
****** ****************.********

10. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

11. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

12. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

13. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

14. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

15. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 2, identity: 0.938

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cacggcaggccatttgaaataccagttgctct	Protospacer
****** **************** ********

16. spacer 5.1|2225607|38|NZ_CP047658|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cggacgcaggatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
*.*******.****************************

17. spacer 2.3|1054623|32|NZ_CP047658|CRISPRCasFinder matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.906

aggagtttaatttccagattgagcgctggata	CRISPR spacer
aagagtttaatttccagacagagcgctggata	Protospacer
*.****************. ************

18. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP042632 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence) position: , mismatch: 3, identity: 0.906

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctct	Protospacer
*.**** ****************.********

19. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP021537 (Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence) position: , mismatch: 3, identity: 0.906

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctct	Protospacer
*.**** ****************.********

20. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP047663 (Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence) position: , mismatch: 3, identity: 0.906

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctct	Protospacer
*.**** ****************.********

21. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to NZ_KY515226 (Salmonella enterica subsp. enterica serovar Derby strain S701 plasmid AnCo3, complete sequence) position: , mismatch: 3, identity: 0.912

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagatagagcgctggataca	Protospacer
*.***************** ************ *

22. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to MT074430 (Salmonella phage pink, complete genome) position: , mismatch: 3, identity: 0.912

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagatagagcgctggataca	Protospacer
*.***************** ************ *

23. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to KY709687 (Salmonella phage 29485, complete genome) position: , mismatch: 3, identity: 0.912

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagatagagcgctggataca	Protospacer
*.***************** ************ *

24. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to NC_022752 (Salmonella phage SETP13, complete genome) position: , mismatch: 3, identity: 0.912

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagatagagcgctggataca	Protospacer
*.***************** ************ *

25. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to KY176369 (Salmonella phage STP03, complete genome) position: , mismatch: 3, identity: 0.912

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagatagagcgctggataca	Protospacer
*.***************** ************ *

26. spacer 2.13|1054623|34|NZ_CP047658|PILER-CR,CRT matches to CP053410 (Salmonella enterica strain 2014K-0203 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.882

aggagtttaatttccagattgagcgctggataga	CRISPR spacer
aagagtttaatttccagacagagcgctggataca	Protospacer
*.****************. ************ *

27. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to KP869108 (Escherichia coli O157 typing phage 10, complete genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

28. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to KP869107 (Escherichia coli O157 typing phage 9, partial genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

29. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NC_019711 (Enterobacteria phage HK629, complete genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

30. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

31. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP021720 (Escherichia coli strain AR_0128 plasmid tig00000793, complete sequence) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaatacccgttgctcttg	Protospacer
****** ****************.********

32. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP020051 (Escherichia coli strain AR_0118 plasmid unitig_3, complete sequence) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaatacccgttgctcttg	Protospacer
****** ****************.********

33. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NC_007804 (Escherichia phage phiV10, complete genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

34. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to DQ126339 (Enterobacteria phage phiV10, complete genome) position: , mismatch: 4, identity: 0.882

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cacggcaggccatttgaaataccagttgctcttg	Protospacer
****** **************** ********

35. spacer 2.7|1054867|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 5, identity: 0.844

gcgatctcgcggaatacaccgacg-aggcgggc	CRISPR spacer
acgatctcgcggaatacgtcgacgtaggccgg-	Protospacer
.****************..***** **** **

36. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP021537 (Escherichia coli strain AR_0119 plasmid unitig_3, complete sequence) position: , mismatch: 5, identity: 0.853

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctcttg	Protospacer
*.**** ****************.********

37. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP042632 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-5, complete sequence) position: , mismatch: 5, identity: 0.853

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctcttg	Protospacer
*.**** ****************.********

38. spacer 2.15|1054745|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP047663 (Escherichia coli strain LD93-1 plasmid pLD93-1-90kb, complete sequence) position: , mismatch: 5, identity: 0.853

cacggctggccatttgaaatacctgttgctctgt	CRISPR spacer
cgcggcaggccatttgaaatacccgttgctcttg	Protospacer
*.**** ****************.********

39. spacer 1.3|1052540|32|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to MT375042 (Acinetobacter phage vB_AbaP_Alexa, complete genome) position: , mismatch: 6, identity: 0.812

cgtagtttcggcagtccagtgcctcgttacgt	CRISPR spacer
catagacacggcagtccagcgcttcgttacgt	Protospacer
*.*** . ***********.**.*********

40. spacer 3.2|1080752|28|NZ_CP047658|PILER-CR matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 6, identity: 0.786

cggacgatggcgatcgcaatcgcgcggg	CRISPR spacer
aagacgatggcgatcgcaatcgtgcctt	Protospacer
 .********************.**

41. spacer 3.4|1080750|32|NZ_CP047658|CRISPRCasFinder,CRT matches to NZ_CP025114 (Bradyrhizobium sp. SK17 strain CBNU plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

42. spacer 3.4|1080750|32|NZ_CP047658|CRISPRCasFinder,CRT matches to NZ_CP044544 (Bradyrhizobium betae strain PL7HG1 plasmid pBbPL7HG1, complete sequence) position: , mismatch: 6, identity: 0.812

atcggacg-atggcgatcgcaatcgcgcgggaa	CRISPR spacer
-ttagacgcatggcgattgcaatcgcgtgggat	Protospacer
 *..**** ********.*********.****

43. spacer 1.3|1052540|32|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to MT708550 (Achromobacter phage Mano, complete genome) position: , mismatch: 7, identity: 0.781

cgtagtttcggcagtccagtgcctcgttacgt	CRISPR spacer
cgtacacgcggcagtccagggcctcgttgcgg	Protospacer
****  . *********** ********.**

44. spacer 2.10|1055050|32|NZ_CP047658|CRISPRCasFinder matches to KR080197 (Mycobacterium phage FlagStaff, complete genome) position: , mismatch: 7, identity: 0.781

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gacgccggcgccgcgatgccgttcgccgggtt	Protospacer
******* ******** ******. * . ***

45. spacer 3.2|1080752|28|NZ_CP047658|PILER-CR matches to NC_015184 (Agrobacterium sp. H13-3 plasmid pAspH13-3a, complete sequence) position: , mismatch: 7, identity: 0.75

cggacgatggcgatcgcaatcgcgcggg	CRISPR spacer
gtgacgatggcgatcgccatcgcggaaa	Protospacer
  *************** ****** ...

46. spacer 3.6|1080872|32|NZ_CP047658|CRISPRCasFinder,CRT matches to MK455769 (Aeromonas phage MJG, complete genome) position: , mismatch: 7, identity: 0.781

gacgcactggatgcgatgatggatatcacttg-	CRISPR spacer
gacgcactgtatgcaatgatgga-atcggaggc	Protospacer
********* ****.******** ***.   *

47. spacer 1.6|1052723|33|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to NC_021529 (Vibrio phage nt-1, complete genome) position: , mismatch: 8, identity: 0.758

ttgacgttgattttgttcgttatgttgccagcc	CRISPR spacer
gagacgttgattttgctcattatgttgactttc	Protospacer
  *************.**.******** *  .*

48. spacer 1.12|1053090|32|NZ_CP047658|CRT matches to NC_012732 (Rickettsia peacockii str. Rustic plasmid pRPR, complete sequence) position: , mismatch: 8, identity: 0.75

ccagaaaacatgaaaaaactttgggaggggat	CRISPR spacer
agggaaaacatgaaaaaactatggaagtagct	Protospacer
  .***************** ***.** .* *

49. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to HQ634174 (Cyanophage MED4-213, complete genome) position: , mismatch: 8, identity: 0.75

cacggc-tggccatttgaaatacctgttgctct	CRISPR spacer
-atagcacctccaattgaaatacctgttgcact	Protospacer
 *..** .  *** **************** **

50. spacer 2.7|1054867|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

gcgatctcgcggaatacaccgacgaggcgggc	CRISPR spacer
gcctgctggcggaatacgccgacgaggcgacg	Protospacer
**   ** *********.***********.

51. spacer 2.9|1054989|32|NZ_CP047658|CRISPRCasFinder matches to MK814759 (Gordonia phage Reyja, complete genome) position: , mismatch: 8, identity: 0.75

gagcctgacgagactactgaggccgttctgtc-	CRISPR spacer
aagcctgacgaggctactggggcca-gcggtgg	Protospacer
.***********.******.****.  * **

52. spacer 2.10|1055050|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.75

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gtcgccgccgccgcgcagccctttccacagcc	Protospacer
* ************* **** *****.  *..

53. spacer 3.1|1080691|28|NZ_CP047658|PILER-CR matches to MN850656 (Flavobacterium phage fF4, complete genome) position: , mismatch: 8, identity: 0.714

ttacgcctgcacagagtacaatgcgtgg	CRISPR spacer
ttacgcctgcaaagagtacaaaagacaa	Protospacer
*********** ********* . ....

54. spacer 1.7|1052785|32|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to MK693005 (Klebsiella phage KPR2, complete genome) position: , mismatch: 9, identity: 0.719

ctctgat-----tcatcggcggcgatactgtcatcac	CRISPR spacer
-----acagtcatcatcggcagcggtactgtcatcaa	Protospacer
     *.     ********.***.***********

55. spacer 1.7|1052785|32|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to NC_031267 (Gordonia phage Lucky10, complete genome) position: , mismatch: 9, identity: 0.719

ctctgattcatcggcggcgatactgtcatcac	CRISPR spacer
gtgccgttcatcggctgcgataccgtcatacc	Protospacer
 * . .********* *******.*****  *

56. spacer 1.9|1052907|32|NZ_CP047658|PILER-CR,CRISPRCasFinder,CRT matches to NC_008760 (Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, complete sequence) position: , mismatch: 9, identity: 0.719

cggcttattgctcttgccgacggattacagtg----	CRISPR spacer
tcacttattgcccttgcagacggatt----tgtccc	Protospacer
. .********.***** ********    **

57. spacer 2.7|1054867|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 9, identity: 0.719

gcgatctcgcggaatacaccgacgaggcgggc	CRISPR spacer
cgcacgtcgcggattacatcgacgaggcggta	Protospacer
   *. ******* ****.***********

58. spacer 2.8|1054928|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

taaggccgtcgccggatcagcctggctatgcc	CRISPR spacer
cggggccgtcgccggatcagccggtctgctgc	Protospacer
...******************* * **..  *

59. spacer 2.10|1055050|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 9, identity: 0.719

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
gaagccgccgccgcgaacccgtttttcccggg	Protospacer
** ************** ******..  .*

60. spacer 2.17|1054867|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

gcgatctcgcggaatacaccgacgaggcgggcgt	CRISPR spacer
gcctgctggcggaatacgccgacgaggcgacgct	Protospacer
**   ** *********.***********.   *

61. spacer 3.4|1080750|32|NZ_CP047658|CRISPRCasFinder,CRT matches to NZ_CP054028 (Rhizobium sp. JKLM19E plasmid pPR19E01, complete sequence) position: , mismatch: 9, identity: 0.719

atcggacgatggcgatcgcaatcgcgcgggaa	CRISPR spacer
aaaagacgatggcgatcgcaatcgtgcctttc	Protospacer
*  .********************.**

62. spacer 3.6|1080872|32|NZ_CP047658|CRISPRCasFinder,CRT matches to NC_047954 (Pseudomonas phage Njord, complete genome) position: , mismatch: 9, identity: 0.719

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggccgaggc	Protospacer
******** ************** ..*.

63. spacer 7.3|3095168|33|NZ_CP047658|CRISPRCasFinder,CRT matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.727

gttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
gttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
**************.* ******** ..*..

64. spacer 7.5|3095169|32|NZ_CP047658|PILER-CR matches to MN855903 (Myoviridae sp. isolate 490, partial genome) position: , mismatch: 9, identity: 0.719

ttcgctgcaaccgctagccaagacggtaggtt	CRISPR spacer
ttcgctgcaaccgttcgccaagaccacaaagg	Protospacer
*************.* ******** ..*..

65. spacer 10.1|3781445|43|NZ_CP047658|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

66. spacer 10.1|3781445|43|NZ_CP047658|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

67. spacer 10.1|3781445|43|NZ_CP047658|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

68. spacer 10.1|3781445|43|NZ_CP047658|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.791

caattgccggatgcggcacaagtttgtaggcacgataagacgc	CRISPR spacer
cggcctaccgatccggcacaagtttgtaggcatgataagacgc	Protospacer
*....  * *** *******************.**********

69. spacer 2.5|1054745|32|NZ_CP047658|CRISPRCasFinder matches to AP014501 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S32-C4, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 10, identity: 0.688

cacggctggccatttgaaatacctgttgctct	CRISPR spacer
aattcaataccatatgcaatacctgttgctct	Protospacer
 *.     .**** ** ***************

70. spacer 2.10|1055050|32|NZ_CP047658|CRISPRCasFinder matches to NZ_CP012383 (Streptomyces ambofaciens ATCC 23877 plasmid pSAM1, complete sequence) position: , mismatch: 10, identity: 0.688

gacgccgccgccgcgaagccgtttccgatgtt	CRISPR spacer
ttgcccgccgcggcgaagccgcttccgtcctc	Protospacer
    ******* *********.***** . *.

71. spacer 2.17|1054867|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP006988 (Rhizobium sp. IE4771 plasmid pRetIE4771b, complete sequence) position: , mismatch: 10, identity: 0.706

gcgatctcgcggaatacaccgacgaggcgggcgt	CRISPR spacer
cgcacgtcgcggattacatcgacgaggcggtact	Protospacer
   *. ******* ****.***********   *

72. spacer 2.20|1055050|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP014600 (Yangia sp. CCB-MM3 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.706

gacgccgccgccgcgaagccgtttccgatgttga	CRISPR spacer
gtcgccgccgccgcgcagccctttccacagcccc	Protospacer
* ************* **** *****.  *..

73. spacer 3.6|1080872|32|NZ_CP047658|CRISPRCasFinder,CRT matches to NC_047894 (Pseudomonas phage uligo, complete genome) position: , mismatch: 10, identity: 0.688

gacgcactggatgcgatgatggatatcacttg	CRISPR spacer
gacgcactcgatgcgatgatggaggcagaagc	Protospacer
******** ************** .. .

74. spacer 9.1|3593836|59|NZ_CP047658|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

-cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc	CRISPR spacer
tcagtgcac-gatcgccggatgcggcgtgaacgccttatccgtcctacggttctgtgctc	Protospacer
 *.* ****  **.**************************** ************   .*

75. spacer 2.18|1054928|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

taaggccgtcgccggatcagcctggctatgccga	CRISPR spacer
cggggccgtcgccggatcagccggtctgctgctc	Protospacer
...******************* * **..  *

76. spacer 2.20|1055050|34|NZ_CP047658|PILER-CR,CRT matches to NZ_CP009292 (Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence) position: , mismatch: 11, identity: 0.676

gacgccgccgccgcgaagccgtttccgatgttga	CRISPR spacer
gaagccgccgccgcgaacccgtttttcccgggcc	Protospacer
** ************** ******..  .*

77. spacer 9.1|3593836|59|NZ_CP047658|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

cggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcacc-	CRISPR spacer
ggtacggctttttgccggatgcggcgtaaacgccttatccggcctacggtt-tggtgcga	Protospacer
 * *  .*** ****************.*********************** ***..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1088296 : 1101479

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295182.1\|1088296_1089058_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0
WP_000254708.1\|1089051_1089678_+	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001272590.1\|1089817_1090957_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000081550.1\|1091019_1092012_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_000104459.1\|1092105_1093470_-	GntP family transporter	NA	NA	NA	NA
WP_001136925.1\|1093558_1094335_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_001278994.1\|1094339_1094978_-	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_000590403.1\|1094974_1096237_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
WP_000847971.1\|1096233_1097142_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	5.1e-118	76.5
WP_001295181.1\|1097337_1098105_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.5e-70	56.7
WP_001141320.1\|1098155_1098812_-	protein-serine/threonine phosphatase	A0A077SLQ6	Escherichia_phage	6.6e-51	47.0
WP_001272928.1\|1098917_1101479_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6

DBSCAN-SWA_2

1181203 : 1191324

Enterobacteria_phage(87.5%)

integrase

attL 1180184:1180197|attR 1192694:1192707

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1180184:1180197	attL	NA	NA	NA	NA
WP_112022386.1\|1181203_1183537_-	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	98.8
WP_112022387.1\|1183551_1183872_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_000459298.1\|1184007_1184463_-	hypothetical protein	Q7M298	Enterobacteria_phage	1.6e-64	99.1
WP_001244665.1\|1184455_1184743_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	8.6e-48	97.9
WP_021570267.1\|1184735_1185326_-	host cell division inhibitor Icd-like protein	Q7M2A7	Enterobacteria_phage	4.5e-67	97.0
WP_112022388.1\|1185322_1185589_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.1e-44	98.9
WP_001283021.1\|1186141_1186876_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	2.3e-129	98.8
WP_000638629.1\|1186872_1187373_+	transactivation protein	NA	NA	NA	NA
WP_047615351.1\|1187446_1188019_+	Polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.9e-94	96.2
WP_074478545.1\|1188442_1190128_-	hypothetical protein	NA	NA	NA	NA
WP_074478543.1\|1190124_1191324_-\|integrase	tyrosine-type recombinase/integrase	A0A1B5FPC6	Escherichia_phage	5.1e-110	50.7
1192694:1192707	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1702666 : 1712111

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000569358.1\|1702666_1703593_+	glycine betaine ABC transporter ATP binding protein YehX	F2Y1V5	Organic_Lake_phycodnavirus	5.7e-08	26.8
WP_000783120.1\|1703597_1704329_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_001216963.1\|1704309_1704417_-	protein YohO	NA	NA	NA	NA
WP_001240401.1\|1704476_1705208_-	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001295431.1\|1705429_1707115_+	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_000598641.1\|1707111_1707831_+	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295430.1\|1707877_1708348_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.8e-82	100.0
WP_074477818.1\|1708388_1708850_-	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.3e-74	98.0
WP_097344525.1\|1708974_1710978_-	hypothetical protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
WP_001292779.1\|1710974_1712111_-	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	8.5e-163	97.7

DBSCAN-SWA_4

1802356 : 1808658

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001115981.1\|1802356_1803751_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	1.3e-19	33.5
WP_000183060.1\|1803925_1804819_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	1.0e-46	42.0
WP_112022327.1\|1805190_1806276_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.7e-99	53.4
WP_001023627.1\|1806275_1807175_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.5e-29	35.6
WP_112022326.1\|1807232_1808111_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	8.7e-107	64.5
WP_112022325.1\|1808115_1808658_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.0e-53	60.0

DBSCAN-SWA_5

1817708 : 1878409

Enterobacteria_phage(35.71%)

transposase,protease,portal,head,terminase,integrase,tail,coat,lysis

attL 1810118:1810133|attR 1850129:1850144

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1810118:1810133	attL	NA	NA	NA	NA
WP_112022319.1\|1817708_1818845_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_112022318.1\|1819512_1820910_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_112022317.1\|1821044_1822451_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	1.8e-37	28.3
WP_000704889.1\|1822698_1823865_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	5.0e-110	52.2
WP_112022316.1\|1824009_1824987_+	LPS O-antigen chain length determinant protein WzzB	NA	NA	NA	NA
WP_112022315.1\|1825082_1825694_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA
WP_001403695.1\|1825687_1826464_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_112022314.1\|1826445_1827183_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_001103560.1\|1827182_1827773_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_000080091.1\|1827772_1828840_-	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_112022313.1\|1828839_1829910_-	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_112022312.1\|1829906_1831211_-	histidinol dehydrogenase	NA	NA	NA	NA
WP_000131756.1\|1831216_1832116_-	ATP phosphoribosyltransferase	A0A0F7Q4B0	Cellulophaga_phage	7.0e-11	92.1
WP_001364200.1\|1832261_1832312_-	his operon leader peptide	NA	NA	NA	NA
WP_001259255.1\|1832594_1832846_+	YoeB-YefM toxin-antitoxin system antitoxin YefM	NA	NA	NA	NA
WP_000767829.1\|1832842_1833097_+	type II toxin-antitoxin system mRNA interferase toxin YoeB	NA	NA	NA	NA
WP_032175485.1\|1833179_1834004_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_000803363.1\|1834049_1834979_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_010723108.1\|1835193_1835256_+	membrane protein YoeI	NA	NA	NA	NA
WP_000019197.1\|1835245_1836604_+	putrescine/proton symporter PlaP	NA	NA	NA	NA
WP_112022311.1\|1836782_1837841_+	transport protein YeeE	NA	NA	NA	NA
WP_000985273.1\|1837854_1838082_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_160183231.1\|1838124_1839549_-	exodeoxyribonuclease I	NA	NA	NA	NA
WP_108188948.1\|1839730_1840909_+\|integrase	site-specific integrase	A0A0P0ZDN8	Stx2-converting_phage	8.9e-232	99.5
WP_000132739.1\|1840889_1841081_-	AlpA family phage regulatory protein	A0A0P0ZBL0	Stx2-converting_phage	1.7e-31	100.0
WP_001277770.1\|1841185_1841365_-	Eag protein	K7PL40	Enterobacteria_phage	7.3e-29	98.3
WP_160183232.1\|1841461_1842031_-	DUF551 domain-containing protein	A0A088CPS0	Enterobacteria_phage	7.9e-69	71.4
WP_160183233.1\|1842032_1842332_-	hypothetical protein	A5VWB2	Enterobacteria_phage	2.4e-56	96.0
WP_001214454.1\|1842328_1842496_-	DUF2737 family protein	Q716F2	Shigella_phage	8.6e-24	98.2
WP_001111278.1\|1842506_1842800_-	DUF2856 family protein	G8C7L1	Escherichia_phage	2.5e-50	99.0
WP_000951325.1\|1842823_1843207_-	hypothetical protein	A0A2I6PID1	Escherichia_phage	3.8e-67	100.0
WP_085445097.1\|1843206_1843812_-	ERF family protein	Q9MCQ9	Enterobacteria_phage	9.2e-108	99.5
WP_097479754.1\|1844068_1844221_-	host cell division inhibitory peptide Kil	K7P837	Enterobacteria_phage	1.4e-20	98.0
WP_016042219.1\|1844205_1844331_-\|protease	protease FtsH-inhibitory lysogeny factor CIII	G8C7L6	Escherichia_phage	2.0e-17	100.0
WP_000213975.1\|1844554_1844755_-	Restriction inhibitor protein ral	A0A0K2FJE6	Enterobacteria_phage	1.4e-33	100.0
WP_160183234.1\|1844833_1845211_-	antitermination protein	A4KWR0	Enterobacteria_phage	1.5e-52	99.1
WP_001519589.1\|1845556_1846252_-	LexA family transcriptional regulator	A0A0N7BTS4	Escherichia_phage	1.3e-129	96.5
WP_000067728.1\|1846327_1846543_+	helix-turn-helix transcriptional regulator	A0A0N7C2U7	Escherichia_phage	8.2e-35	98.6
WP_000251073.1\|1846662_1846956_+	hypothetical protein	K7P6Y2	Enterobacteria_phage	2.8e-46	100.0
WP_001608293.1\|1847136_1847958_+	replication protein	K7PJZ3	Enterobacterial_phage	2.0e-153	99.6
WP_072770558.1\|1847954_1849331_+	AAA family ATPase	A0A0P0ZC27	Stx2-converting_phage	2.8e-253	99.6
WP_001543887.1\|1849605_1850022_+	hypothetical protein	A0A2D1GLH4	Escherichia_phage	5.1e-73	99.3
WP_160183235.1\|1850014_1850617_+	endonuclease	A0A2D1GLP6	Escherichia_phage	3.8e-114	99.5
1850129:1850144	attR	NA	NA	NA	NA
WP_160183236.1\|1850613_1851141_+	phage N-6-adenine-methyltransferase	K7PJZ4	Enterobacterial_phage	4.7e-100	99.4
WP_001254238.1\|1851137_1851314_+	NinE family protein	A0A220NRK6	Escherichia_phage	2.7e-28	100.0
WP_000386657.1\|1851316_1851676_+	DUF2591 domain-containing protein	G8EYI2	Enterobacteria_phage	1.2e-62	95.8
WP_000950963.1\|1851675_1851852_+	protein ninF	Q76H71	Enterobacteria_phage	6.7e-27	100.0
WP_057780661.1\|1851844_1852456_+	recombination protein NinG	A0A2D1GLP2	Escherichia_phage	3.0e-98	98.5
WP_000144614.1\|1852452_1852659_+	protein ninH	Q716C0	Shigella_phage	7.3e-33	100.0
WP_053920027.1\|1852636_1853308_+	serine/threonine protein phosphatase	Q716B9	Shigella_phage	3.3e-130	97.8
WP_000512810.1\|1853298_1853817_+	DUF1133 family protein	Q716B8	Shigella_phage	2.0e-95	99.4
WP_160183237.1\|1854415_1854619_+	hypothetical protein	I6R0S9	Salmonella_phage	9.4e-33	98.5
WP_160183278.1\|1854596_1855094_+	lysozyme	I6R0P2	Salmonella_phage	8.4e-91	98.8
WP_160183238.1\|1855182_1855620_+\|lysis	lysis protein	Q716B4	Shigella_phage	5.0e-71	97.9
WP_032353478.1\|1855607_1855760_+	hypothetical protein	C6ZR68	Salmonella_phage	2.1e-21	98.0
WP_001059339.1\|1855962_1856487_+	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	4.5e-87	94.2
WP_000807780.1\|1856785_1857028_+	DUF2560 family protein	A5VW77	Enterobacteria_phage	7.6e-29	78.8
WP_000113731.1\|1857030_1857471_+	hypothetical protein	C7U0V7	Enterobacteria_phage	5.9e-80	100.0
WP_160183239.1\|1857467_1858883_+\|terminase	PBSX family phage terminase large subunit	A5VW75	Enterobacteria_phage	2.0e-278	99.6
WP_063267181.1\|1858884_1861083_+\|portal	portal protein	A0A088CQ69	Enterobacteria_phage	0.0e+00	97.1
WP_000372575.1\|1861173_1862067_+	scaffold protein	A0A088CPT0	Enterobacteria_phage	4.3e-130	99.0
WP_000013274.1\|1862085_1863339_+\|coat	coat protein	A5VW72	Enterobacteria_phage	9.8e-237	99.8
WP_001462613.1\|1863380_1863569_+	hypothetical protein	A0A088CPR7	Enterobacteria_phage	6.5e-28	98.4
WP_001140510.1\|1863549_1864011_+\|head	head DNA stabilization protein	A5VW70	Enterobacteria_phage	7.1e-84	100.0
WP_021514403.1\|1864162_1864747_+	hypothetical protein	A0A2H4FQU5	Salmonella_phage	3.3e-110	99.5
WP_160183240.1\|1864694_1866113_+	hypothetical protein	Q9AYZ4	Salmonella_phage	3.5e-267	97.0
WP_160183241.1\|1866112_1866814_+\|tail	phage tail protein	A5VW68	Enterobacteria_phage	3.2e-96	81.1
WP_160183242.1\|1866813_1867269_+	DUF2824 family protein	A0A2D1GLX4	Escherichia_phage	6.7e-87	98.7
WP_100664626.1\|1867271_1867964_+	DNA transfer protein	G5DA80	Enterobacteria_phage	2.1e-111	99.1
WP_160183243.1\|1867973_1869269_+	acyltransferase	Q716G3	Shigella_phage	5.1e-180	89.6
WP_160183244.1\|1869268_1871266_+	lytic transglycosylase domain-containing protein	Q716G2	Shigella_phage	0.0e+00	95.9
WP_024191141.1\|1871440_1871950_-	HNH endonuclease	A0A1W6DXY0	Salmonella_phage	2.2e-30	45.6
WP_160183245.1\|1873995_1875234_-	glucosyl transferase	O22006	Shigella_phage	8.3e-55	34.5
WP_160183246.1\|1875233_1876151_-	glycosyltransferase family 2 protein	U5P087	Shigella_phage	2.2e-161	92.7
WP_024191140.1\|1876147_1876510_-	GtrA family protein	U5P0S6	Shigella_phage	1.2e-54	90.8
WP_001296209.1\|1877242_1878409_+	serine-type D-Ala-D-Ala carboxypeptidase DacD	B6DZZ7	Stx2-converting_phage	5.9e-228	99.5

DBSCAN-SWA_6

2323827 : 2345990

Enterobacteria_phage(35.0%)

transposase,lysis,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000955178.1\|2323827_2324010_-	hypothetical protein	Q7Y2Q9	Escherichia_phage	6.3e-12	74.5
WP_000589005.1\|2324187_2325501_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_001301033.1\|2325962_2326295_-	protein FlxA	NA	NA	NA	NA
WP_001326990.1\|2326497_2326803_-	hypothetical protein	NA	NA	NA	NA
WP_000534858.1\|2326827_2327067_+	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_000323025.1\|2327066_2327354_+	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000813254.1\|2327425_2327581_+	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000980994.1\|2327797_2328049_+	hypothetical protein	NA	NA	NA	NA
WP_012304870.1\|2328115_2328394_+	hypothetical protein	NA	NA	NA	NA
WP_001265198.1\|2328395_2329445_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.3e-112	57.3
WP_001047135.1\|2329458_2330211_+	antitermination protein	A0A192Y5X6	Salmonella_phage	7.1e-134	92.8
WP_120795389.1\|2330488_2330578_-	Qin prophage; protein YnfS	NA	NA	NA	NA
WP_000087756.1\|2330632_2330845_-	cold shock-like protein CspF	NA	NA	NA	NA
WP_000066484.1\|2331145_2331361_+	cold shock-like protein CspB	A0A1W6JNX5	Morganella_phage	3.4e-25	76.5
WP_000839590.1\|2332114_2332330_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_000189916.1\|2332334_2332646_+	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_001092971.1\|2332642_2333176_+	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_001071769.1\|2333172_2333670_+	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_000066495.1\|2334032_2334245_+	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_071524604.1\|2334255_2334444_+	cold-shock protein	NA	NA	NA	NA
WP_120795388.1\|2334446_2334512_+	Qin prophage; protein YnfR	NA	NA	NA	NA
WP_001309517.1\|2334591_2334747_+	hypothetical protein	NA	NA	NA	NA
WP_001019606.1\|2334918_2335092_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_000373090.1\|2335243_2335654_-	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
WP_001368374.1\|2335711_2335945_-	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
WP_054626213.1\|2338583_2340569_+	hypothetical protein	X2KTY7	Enterobacteria_phage	1.5e-186	57.7
WP_000885611.1\|2340568_2341144_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
WP_000086525.1\|2341241_2341832_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000836768.1\|2342148_2342382_-	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_120795384.1\|2342450_2342564_-	Rac prophage; protein YnaM	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000347482.1\|2343157_2344441_+	MHS family MFS transporter	NA	NA	NA	NA
WP_000527806.1\|2344529_2345990_+	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.9e-42	29.6

DBSCAN-SWA_7

2620843 : 2633591

Escherichia_phage(69.23%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001169151.1\|2620843_2620999_+	YdaF family protein	M4QQ57	Salicola_phage	6.1e-08	55.3
WP_010377803.1\|2620995_2621484_-	superinfection exclusion protein B	NA	NA	NA	NA
WP_000560223.1\|2621925_2622147_+	killing protein KilR	A0A0U2RTC4	Escherichia_phage	2.0e-36	98.6
WP_001352098.1\|2622146_2622317_+	conserved protein, Rac prophage	A0A0U2SHB5	Escherichia_phage	3.6e-17	71.4
WP_000632297.1\|2622391_2622667_+	protein RacC	A0A0U2QW85	Escherichia_phage	1.4e-42	96.7
WP_160183263.1\|2622768_2625369_+	exodeoxyribonuclease VIII	A0A0U2I1R6	Escherichia_phage	6.1e-249	63.5
WP_000166313.1\|2625361_2626171_+	recombination protein RecT	A0A1P8DTF2	Proteus_phage	4.0e-106	71.5
WP_001443846.1\|2626226_2626376_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	A0A0U2QQP4	Escherichia_phage	2.5e-22	95.9
WP_001302840.1\|2626413_2626602_+	DUF1187 family protein	A0A0U2QL97	Escherichia_phage	5.5e-27	98.4
WP_000079604.1\|2626701_2626917_+	excisionase XisR	A0A0U2RY08	Escherichia_phage	1.8e-37	100.0
WP_074478134.1\|2626918_2628154_+	DUF3596 domain-containing protein	A0A0U2JGI6	Escherichia_phage	1.9e-240	99.3
WP_000662472.1\|2628205_2629141_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.7e-145	98.4
WP_000123737.1\|2629269_2630643_-	ATP-dependent RNA helicase DbpA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	6.6e-53	33.1
WP_000387388.1\|2631120_2632104_-	zinc transporter ZntB	NA	NA	NA	NA
WP_012304881.1\|2632358_2633591_+	diguanylate cyclase DgcM	A0A127AWB9	Bacillus_phage	1.2e-16	38.8

DBSCAN-SWA_8

3672151 : 3704094

Shigella_phage(54.17%)

holin,integrase,lysis,terminase

attL 3682029:3682042|attR 3706370:3706383

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000131044.1\|3672151_3674185_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	3.4e-21	27.4
WP_001335745.1\|3674313_3674901_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_000089113.1\|3674914_3676387_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_001159094.1\|3676400_3678071_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	4.7e-61	31.2
WP_001209100.1\|3678283_3678952_+	hypothetical protein	NA	NA	NA	NA
WP_000370307.1\|3679194_3679890_-	lactate utilization protein C	NA	NA	NA	NA
WP_000023928.1\|3679882_3681310_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_001102108.1\|3681320_3682040_-	(Fe-S)-binding protein	NA	NA	NA	NA
3682029:3682042	attL	NA	NA	NA	NA
WP_000339594.1\|3682566_3683421_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001046307.1\|3683646_3684972_+	pyridine nucleotide-disulfide oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.5e-113	47.6
WP_000474076.1\|3685080_3685317_+	DUF1471 domain-containing protein	NA	NA	NA	NA
WP_001306921.1\|3685328_3685922_+	reactive chlorine species resistance protein RclC	NA	NA	NA	NA
WP_000621009.1\|3686511_3687363_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000929175.1\|3688966_3689461_-\|terminase	phage terminase small subunit P27 family	U5P067	Shigella_phage	3.9e-88	99.4
WP_001532225.1\|3689586_3689937_-	HNH endonuclease	M1FQV2	Enterobacteria_phage	3.1e-63	96.6
WP_000738423.1\|3690462_3690756_+	increased serum survival lipoprotein Iss	K7PL54	Enterobacteria_phage	2.0e-44	91.8
WP_001228695.1\|3690846_3691029_-\|lysis	prophage lysis lipoprotein RzoD	K7PHU6	Enterobacteria_phage	2.9e-17	98.3
WP_074478390.1\|3691245_3691722_-	glycoside hydrolase family protein	K7PKV2	Enterobacteria_phage	1.1e-84	95.6
WP_001120502.1\|3691725_3692061_-\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	5.2e-60	100.0
WP_096973088.1\|3692137_3693190_-	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.4e-204	98.0
WP_032192725.1\|3693339_3693534_-	hypothetical protein	Q8SBE3	Shigella_phage	3.7e-26	93.8
WP_032192726.1\|3694108_3695206_+	porin	Q1MVN1	Enterobacteria_phage	1.2e-158	77.6
WP_074478386.1\|3695393_3695777_-	antitermination protein	A0A088CD47	Shigella_phage	5.7e-55	80.8
WP_074478384.1\|3695794_3696091_-	DUF968 domain-containing protein	Q8SBE7	Shigella_phage	5.2e-32	100.0
WP_000450738.1\|3696601_3697228_+	LexA family transcriptional regulator	K7PM82	Enterobacteria_phage	2.5e-47	48.8
WP_000549623.1\|3697475_3697682_+	hypothetical protein	NA	NA	NA	NA
WP_000016389.1\|3697653_3698088_-	hypothetical protein	U5P096	Shigella_phage	8.4e-79	100.0
WP_000135682.1\|3698556_3698919_+	hypothetical protein	U5P4J6	Shigella_phage	3.3e-60	100.0
WP_000081287.1\|3698984_3699809_+	DUF2303 family protein	U5P439	Shigella_phage	6.0e-150	100.0
WP_074478380.1\|3699936_3700473_+	5'-deoxynucleotidase	U5P0T3	Shigella_phage	3.1e-99	98.3
WP_001242749.1\|3700463_3700826_+	phage protein	U5P092	Shigella_phage	2.1e-67	100.0
WP_074477881.1\|3700825_3701131_+	hypothetical protein	U5P0J0	Shigella_phage	2.6e-50	99.0
WP_000433939.1\|3701130_3701481_+	helix-turn-helix domain-containing protein	U5P4J3	Shigella_phage	4.9e-61	100.0
WP_000051887.1\|3701357_3702521_+\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_001407714.1\|3702693_3704094_+\|integrase	integrase family protein	A0A221SAN4	Ralstonia_phage	9.5e-07	28.4
3706370:3706383	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP047659

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

57775 : 99927

Escherichia_phage(30.77%)

integrase,transposase,protease

attL 52724:52737|attR 65235:65248

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
52724:52737	attL	NA	NA	NA	NA
WP_012478345.1\|57775_58750_+\|transposase	IS30-like element ISApl1 family transposase	W5R8L2	Staphylococcus_phage	2.3e-52	39.1
WP_049589868.1\|58945_60571_+	phosphoethanolamine--lipid A transferase MCR-1.1	NA	NA	NA	NA
WP_160183281.1\|60642_61449_+	PAP2 family protein	NA	NA	NA	NA
WP_001805195.1\|61384_61729_+	hypothetical protein	NA	NA	NA	NA
WP_000795947.1\|61750_62926_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_001285422.1\|63096_63309_+	hypothetical protein	NA	NA	NA	NA
WP_001232449.1\|63669_64752_+	hypothetical protein	NA	NA	NA	NA
WP_001284313.1\|64918_66418_-	kinase	NA	NA	NA	NA
65235:65248	attR	NA	NA	NA	NA
WP_000081622.1\|66443_68081_-	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_001253653.1\|68080_69121_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001253658.1\|69206_69845_-	VWA domain-containing protein	NA	NA	NA	NA
WP_000116681.1\|69844_70486_-	tellurium resistance protein TerX	NA	NA	NA	NA
WP_001388628.1\|70508_71147_-	VWA domain-containing protein	NA	NA	NA	NA
WP_001176767.1\|71609_72077_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_000506887.1\|72094_73303_-	DUF4236 domain-containing protein	NA	NA	NA	NA
WP_000797366.1\|73313_74270_-	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_042634304.1\|74269_75349_-\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.8e-38	34.1
WP_001040059.1\|75350_76124_-	hypothetical protein	NA	NA	NA	NA
WP_001285478.1\|76116_77259_-	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	1.7e-30	35.4
WP_001035162.1\|77268_78327_-	hypothetical protein	NA	NA	NA	NA
WP_042634303.1\|78650_79232_+	tellurium resistance protein TerZ	K4JRX3	Caulobacter_phage	6.3e-13	30.0
WP_001054787.1\|79231_80389_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_000007448.1\|80411_80867_+	Tellurite resistance protein TerB	NA	NA	NA	NA
WP_062914744.1\|80889_81930_+	tellurium resistance membrane protein TerC	K7QKE8	Escherichia_phage	2.2e-77	48.0
WP_000116677.1\|81978_82557_+	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	3.3e-06	40.0
WP_000301242.1\|82624_83200_+	TerD family protein	K4JRX3	Caulobacter_phage	8.7e-31	41.6
WP_001053338.1\|83628_84870_+	tellurium resistance protein TerF	NA	NA	NA	NA
WP_000077926.1\|85432_85714_-	hypothetical protein	NA	NA	NA	NA
WP_000398480.1\|85763_85955_-	hypothetical protein	NA	NA	NA	NA
WP_001371937.1\|86046_86418_-	hypothetical protein	NA	NA	NA	NA
WP_000341066.1\|86760_87153_+	hypothetical protein	NA	NA	NA	NA
WP_024136327.1\|87756_88050_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088046.1\|88054_89380_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA
WP_000134171.1\|89440_89647_+	hypothetical protein	NA	NA	NA	NA
WP_000985911.1\|89748_90159_+	hypothetical protein	NA	NA	NA	NA
WP_146881499.1\|90171_90987_+	HNH endonuclease	G0X580	Salmonella_phage	1.9e-15	35.4
WP_001043843.1\|91240_91666_+	hypothetical protein	NA	NA	NA	NA
WP_001224687.1\|92214_92523_+	hypothetical protein	NA	NA	NA	NA
WP_000784387.1\|92538_93396_+	HNH endonuclease	G0X580	Salmonella_phage	3.9e-11	34.2
WP_152921942.1\|94244_94712_-	DUF4158 domain-containing protein	A0A1B0V7H9	Salmonella_phage	4.9e-08	47.2
WP_063120614.1\|95369_96503_-	permease	NA	NA	NA	NA
WP_001175593.1\|96608_96932_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001067858.1\|97474_98179_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001067858.1\|98290_98995_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_001389365.1\|99162_99927_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7

DBSCAN-SWA_2

103265 : 160778

Escherichia_phage(33.33%)

integrase,transposase

attL 103213:103272|attR 156766:157586

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
103213:103272	attL	NA	NA	NA	NA
WP_001067855.1\|103265_103970_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000105383.1\|104236_105673_+	glutathione synthase	NA	NA	NA	NA
WP_000427623.1\|106090_107095_+\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_032193599.1\|107667_108372_-	replication initiation protein	I3WF20	Macacine_betaherpesvirus	6.4e-20	28.7
WP_001067858.1\|108401_109106_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.2e-138	99.6
WP_152921935.1\|109117_109273_-	hypothetical protein	NA	NA	NA	NA
WP_000193209.1\|109915_110734_+	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_001572381.1\|110730_111936_+	hypothetical protein	NA	NA	NA	NA
WP_000078514.1\|112215_113535_-	DUF1173 family protein	NA	NA	NA	NA
WP_000833382.1\|113785_115213_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	3.4e-100	52.3
WP_001572389.1\|115427_115943_+	thermonuclease family protein	A0A1X6WF84	Pacmanvirus	2.1e-07	38.6
WP_000975182.1\|115945_116842_+	hypothetical protein	NA	NA	NA	NA
WP_015059496.1\|117063_117297_+	hypothetical protein	NA	NA	NA	NA
WP_001572393.1\|117958_118189_+	hypothetical protein	NA	NA	NA	NA
WP_000185304.1\|118525_118987_+	hypothetical protein	NA	NA	NA	NA
WP_000074418.1\|119016_119424_+	hypothetical protein	NA	NA	NA	NA
WP_029698059.1\|119474_119792_-	hypothetical protein	NA	NA	NA	NA
WP_031613424.1\|120168_120519_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|122208_122913_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001617865.1\|123215_124091_+	class A extended-spectrum beta-lactamase CTX-M-14	A0A1B0VBP7	Salmonella_phage	6.1e-153	99.6
WP_014839980.1\|124702_125119_+	fosfomycin resistance glutathione transferase FosA3	Q2LI91	Bacillus_phage	2.0e-08	35.6
WP_014839979.1\|125123_125642_-	hypothetical protein	NA	NA	NA	NA
WP_071448054.1\|125641_126388_-	winged helix family transcriptional regulator	NA	NA	NA	NA
WP_001067855.1\|126393_127098_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001199192.1\|127211_127988_+	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA
WP_000602738.1\|129538_130291_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_006581703.1\|132101_132587_+	hypothetical protein	NA	NA	NA	NA
WP_085940648.1\|132783_133874_-\|transposase	IS4 family transposase ISAba1	NA	NA	NA	NA
WP_001043260.1\|133963_134779_+	sulfonamide-resistant dihydropteroate synthase Sul2	A0A0B5J4J5	Pandoravirus	5.9e-09	27.6
WP_000251875.1\|134865_135168_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_001445143.1\|135061_135313_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|135343_136837_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001255015.1\|136948_137254_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_058657119.1\|137281_138496_-	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	5.5e-19	28.7
WP_001447541.1\|138712_139597_-	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_001067784.1\|140521_141226_+\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_065800308.1\|141310_141700_-	hypothetical protein	NA	NA	NA	NA
WP_000427623.1\|141964_142969_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_015344976.1\|143047_145999_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
WP_000147567.1\|146001_146562_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_081316080.1\|146687_147272_-	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000845039.1\|147240_148254_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_001083725.1\|148398_148896_+	trimethoprim-resistant dihydrofolate reductase DfrA12	A0A0A0PL85	Bacillus_phage	7.5e-23	40.9
WP_001336345.1\|149007_149298_+	DUF1010 domain-containing protein	NA	NA	NA	NA
WP_001206356.1\|149303_150095_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA
WP_000095725.1\|150356_151616_+	chloramphenicol efflux MFS transporter CmlA1	S4TR35	Salmonella_phage	4.8e-26	31.7
WP_001206316.1\|151708_152500_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000800531.1\|152669_153002_+	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA
WP_000034420.1\|154181_154973_-	sulfonamide-resistant dihydropteroate synthase Sul3	A0A0B5J4J5	Pandoravirus	1.2e-14	26.5
WP_001354008.1\|155441_155687_-	hypothetical protein	NA	NA	NA	NA
WP_000612791.1\|155724_156588_-	SDR family oxidoreductase	W8CYX9	Bacillus_phage	2.5e-05	31.0
WP_001067855.1\|156818_157523_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|157673_158489_+	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
156766:157586	attR	NA	NA	NA	NA
WP_001067855.1\|158678_159383_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000376616.1\|159607_159811_-	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|159938_160778_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047660

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP047658

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP047659

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection