CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047807	Staphylococcus aureus strain UP_1612 chromosome, complete genome	7 crisprs	csa3,cas3,DinG,DEDDh,WYL	4	2	215	1
NZ_CP047808	Staphylococcus aureus strain UP_1612 plasmid unnamed, complete sequence	0 crisprs	csa3	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047807_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_1

405539-405626

Orphan

Consensus_repeat	Method
TGGGGCCCCAACACAGAAGCTGACGAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047807_1

>merge|NZ_CP047807|1|405539-405626|CRISPRCasFinder
TGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACTATAATGTGCAAGTTGGGGTGGGGCCCCAACATAGAAGCTGACGAAAAG

>NZ_CP047807|1|1|405539-405626|CRISPRCasFinder
TGGGGCCCCAACACAGAAGCTGACGAAAAG	TCAGCTTACTATAATGTGCAAGTTGGGG
TGGGGCCCCAACATAGAAGCTGACGAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000182211.1\|408196_408823_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237622
NZ_CP047807.1\|WP_000953299.1\|399757_401905_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	unknown	unknown	gnl\|CDD\|225212
NZ_CP047807.1\|WP_000034716.1\|408891_410724_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP047807.1\|WP_047928473.1\|410859_411999_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237656
NZ_CP047807.1\|WP_001190127.1\|412942_413695_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|224303
NZ_CP047807.1\|WP_000108667.1\|413701_415048_+\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl\|CDD\|223694
NZ_CP047807.1\|WP_001019326.1\|396762_397347_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224627
NZ_CP047807.1\|WP_000048060.1\|415340_415517_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP047807.1\|WP_001088020.1\|397347_397701_+\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
NZ_CP047807.1\|WP_001802667.1\|415760_416444_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223961
NZ_CP047807.1\|WP_001282563.1\|401961_402936_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_CP047807.1\|WP_001274017.1\|402980_403232_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP047807.1\|WP_000368345.1\|403577_405401_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP047807.1\|WP_078104170.1\|398459_399146_+\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP047807.1\|WP_047928474.1\|405963_407088_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP047807.1\|WP_000725162.1\|396203_396773_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|273101
NZ_CP047807.1\|WP_000627144.1\|407187_408165_+\|heat-inducible-transcription-repressor-HrcA	unknown	unknown	gnl\|CDD\|273017
NZ_CP047807.1\|WP_000084822.1\|397703_398420_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP047807.1\|WP_000439693.1\|399237_399699_+\|ComE-operon-protein-2	unknown	unknown	gnl\|CDD\|131622
NZ_CP047807.1\|WP_001104607.1\|412002_412941_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000182211.1\|408196_408823_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237622	PRK14140, PRK14140, heat shock protein GrpE; Provisional.	3.74407e-81
NZ_CP047807.1\|WP_000953299.1\|399757_401905_+\|DNA-internalization-related-competence-protein-ComEC/Rec2	gnl\|CDD\|225212	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only].	1.36441e-90
NZ_CP047807.1\|WP_000034716.1\|408891_410724_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP047807.1\|WP_047928473.1\|410859_411999_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237656	PRK14280, PRK14280, molecular chaperone DnaJ.	0
NZ_CP047807.1\|WP_001190127.1\|412942_413695_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|224303	COG1385, COG1385, Uncharacterized protein conserved in bacteria [Function unknown].	1.46402e-91
NZ_CP047807.1\|WP_000108667.1\|413701_415048_+\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	0
NZ_CP047807.1\|WP_001019326.1\|396762_397347_+\|HD-domain-containing-protein	gnl\|CDD\|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	8.54529e-80
NZ_CP047807.1\|WP_000048060.1\|415340_415517_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	1.15423e-10
NZ_CP047807.1\|WP_001088020.1\|397347_397701_+\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	5.95861e-47
NZ_CP047807.1\|WP_001802667.1\|415760_416444_+\|hypothetical-protein	gnl\|CDD\|223961	COG1030, NfeD, Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones].	8.78003e-63
NZ_CP047807.1\|WP_001282563.1\|401961_402936_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	4.1415e-104
NZ_CP047807.1\|WP_001274017.1\|402980_403232_-\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.42889e-17
NZ_CP047807.1\|WP_000368345.1\|403577_405401_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP047807.1\|WP_078104170.1\|398459_399146_+\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	1.68903e-31
NZ_CP047807.1\|WP_047928474.1\|405963_407088_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP047807.1\|WP_000725162.1\|396203_396773_+\|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl\|CDD\|273101	TIGR00482, Probable_nicotinate-nucleotide_adenylyltransferase, nicotinate (nicotinamide) nucleotide adenylyltransferase. This model represents the predominant bacterial/eukaryotic adenylyltransferase for nicotinamide-nucleotide, its deamido form nicotinate nucleotide, or both. The first activity, nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), synthesizes NAD by the salvage pathway, while the second, nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) synthesizes the immediate precursor of NAD by the de novo pathway. In E. coli, NadD activity is biased toward the de novo pathway while salvage activity is channeled through the multifunctional NadR protein, but this division of labor may be exceptional. The given name of this model, nicotinate (nicotinamide) nucleotide adenylyltransferase, reflects the lack of absolute specificity with respect to substrate amidation state in most species. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides].	1.98239e-76
NZ_CP047807.1\|WP_000627144.1\|407187_408165_+\|heat-inducible-transcription-repressor-HrcA	gnl\|CDD\|273017	TIGR00331, Heat-inducible_transcription_repressor_HrcA, heat shock gene repressor HrcA. HrcA represses the class I heat shock operons groE and dnaK; overproduction prevents induction of these operons by heat shock while deletion allows constitutive expression even at low temperatures. In Bacillus subtilis, hrcA is the first gene of the dnaK operon and so is itself a heat shock gene. [Regulatory functions, DNA interactions].	2.05887e-119
NZ_CP047807.1\|WP_000084822.1\|397703_398420_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.00559e-15
NZ_CP047807.1\|WP_000439693.1\|399237_399699_+\|ComE-operon-protein-2	gnl\|CDD\|131622	TIGR02571, putative_dCMP_deaminase, ComE operon protein 2. This protein is found in the ComE operon for "late competence" as characterized in B. subtilis. Proteins in this family contain homology to a cytidine/deoxycytidine deaminase domain family (pfam00383), and may carry out this activity.	4.81051e-102
NZ_CP047807.1\|WP_001104607.1\|412002_412941_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	9.7051e-134

>NZ_CP047807.1|WP_000368345.1|403577_405401_+|elongation-factor-4
MDNEQRLKRRENIRNFSIIAHIDHGKSTLADRILENTKSVETRDMQDQLLDSMDLERERGITIKLNAVRLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNELELMPVINKIDLPAAEPERVKQEIEDMIGLDQDDVVLASAKSNIGIEEILEKIVEVVPAPDGDPEAPLKALIFDSEYDPYRGVISSIRIVDGVVKAGDKIRMMATGKEFEVTEVGINTPKQLPVDELTVGDVGYIIASIKNVDDSRVGDTITLASRPASEPLQGYKKMNPMVYCGLFPIDNKNYNDLREALEKLQLNDASLEFEPESSQALGFGYRTGFLGMLHMEIIQERIEREFGIELIATAPSVIYQCILRDGSEVTVDNPAQMPDRDKIDKIFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYELPLAEVVFDFFDQLKSNTKGYASFDYEFIENKESNLVKMDILLNGDKVDALSFIVHRDFAYERGKALVEKLKTLIPRQQFEVPVQAAIGQKIVARTNIKSMGKNVLAKCYGGDISRKRKLLEKQKAGKAKMKAVGNVEIPQDAFLAVLKMDDE
>NZ_CP047807.1|WP_001274017.1|402980_403232_-|30S-ribosomal-protein-S20
MANIKSAIKRVKTTEKAEARNISQKSAMRTAVKNAKTAVSNNADNKNELVSLAVKLVDKAAQSNLIHSNKADRIKSQLMTANK
>NZ_CP047807.1|WP_001282563.1|401961_402936_+|DNA-polymerase-III-subunit-delta
MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYETEIAPIVEETLTLPFFSDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGENLIVFEIYQNKLDERKKLTKTLKKHARLKKIEQMSEEEIKKWIQSKLNENFKDIKRDALDLFIELTGINFNIVSQEIEKLILFLGDRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAIHLVKDLITMKEEPIKLLALITSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLDELLNIVDACAETDYKLKSSYMDKQLILELFILSL
>NZ_CP047807.1|WP_000953299.1|399757_401905_+|DNA-internalization-related-competence-protein-ComEC/Rec2
MLSTFLFILLLYIAYRKNKIVYAPTSLFLIIFSSWYLHYSQQAIFNYINYIERTSQFNERAQVIQIQRQDSDTYKGRLSLKNEIYPFFLTDKKNFDLKKIESRNCIVKGQFKVNENKFVTLKLQSIVVQSCLESNRSNLIEKHKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNLPLFVIKGITIIVLTLFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFAFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQQLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYLVDLSFNFHDWLLDLFTRIKQSHFSVPKFNDWIFIIFIISVYYIFWLLAKRKYILVTFWTIIILTLLITFPTNSHHKITMLNVGQGDSILYEGGKNQNVLIDTGGKVIDDTKQPSYSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKGYSSNTLMLLSKLSHKYNIKLMDVRQVSSFKLGDSSFLFFDSFIPNSRDKNEYSIITMITYQNKKVLLMGDASKNNESLLLKKYNLPEIDILKVGHHGSKTSSSKEFIEMIKPKISLISSGKNNMYHLPNIEVVKRLQRIRSRIYNSQQNGQVTIDLDDNLKVDSNSYGNASGL
>NZ_CP047807.1|WP_000439693.1|399237_399699_+|ComE-operon-protein-2
MERIKWEEYFMAQSHLLALRSTCQRLSVGATIVKDNRIIAGGYNGSVAGEVHCIDEGCLIEDGHCIRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYATKLLKQSGIEFKKIPFSPEYVAKYLTKG
>NZ_CP047807.1|WP_078104170.1|398459_399146_+|ComEA-family-DNA-binding-protein
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKNGNINNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT
>NZ_CP047807.1|WP_000084822.1|397703_398420_+|class-I-SAM-dependent-methyltransferase
MSQYAEMSLVYDQLTQDQPYEKWFEIVKNHCKDESKILDIGCGTGSLTVQLEALGNVTGMDLSVDMLTVAAQKSANVNWLEGDMTSFDLQQQFDIITIFCDSLNYLQDETAVIETFINVYHHLTDSGVFIFDVHTVYKMMTLFNNQSYIDDKGDIFLAWDAVQGDLPLSVYHDMTFFIRHEDETYSRFDESHFQRTFDEKTYLSWLAQVGFKHVETFTDFNIDEHNEDAERLFFIAKK
>NZ_CP047807.1|WP_001088020.1|397347_397701_+|ribosome-silencing-factor
MNSQELLAIAVDAIDNKKGEDTISLEMKGISDMTDYFVVTHGNNERQVQAIARAVKEVANEQNIEVKRMEGYNEARWILIDLADVVVHVFHKDERNYYNIEKLYQDAPLESYGQVAY
>NZ_CP047807.1|WP_001019326.1|396762_397347_+|HD-domain-containing-protein
MNIEKAKRLAKEKLPEKRYNHSLRVSETAIKLAEIYDGDTSKVELAGVLHDFCKYDDLGKMYQIVRQYELGNDLLSYGSEILHGPVCAAIMEHEYGINDEEVLMAIKYHTTGRQQMTKTEKLIFIADYIEPGRTIPGVDDIRDMAYNQGSLDKTIYEISKRTVLFLIQKDITVYNKTIDCLNYYNYSDERIKDD
>NZ_CP047807.1|WP_000725162.1|396203_396773_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEYLKEMVTFVVVNRDKNSQNVENAMIAIQIPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYEH
>NZ_CP047807.1|WP_047928474.1|405963_407088_+|oxygen-independent-coproporphyrinogen-III-oxidase
MTVQSAYIHIPFCVRICTYCDFNKYFIQNQPVDEYLDALITEMSTAKYRNLKTMYVGGGTPTALSINQLERLLKAIRDTFTITGEYTFEANPDELTKEKVQLLEKYGVNRISMGVQTFKSELLSVLGRTHNTEDIYTSVLNAKNAGIKSISLDLMYHLPKQTIEDFEQSLDLALDMDIQHISSYGLILEPKTQFYNMYRKGLLKLPNEDLGADMYQLLMSKIEQSPFHQYEISNFALDGHESEHNKVYWFNEEYYGFGAGASGYVDGVRYTNINPVNHYIKAINKESKAILVSNKPSLTERMEEEMFLGLRLNEGVSSSRFKKKFDQSIESVFGQTINNLKEKELIVEKNDAIALTKRGKVIGNEVFEAFLIND
>NZ_CP047807.1|WP_000627144.1|407187_408165_+|heat-inducible-transcription-repressor-HrcA
MITDRQLSILNAIVEDYVDFGQPVGSKTLIERHNLNVSPATIRNEMKQLEDLNYIEKTHSSSGRSPSQLGFRYYVNRLLEQTSHQKTNKLRRLNQLLVENQYDVSSALTYFADELSNISQYTTLVVHPNHKQDIINNVHLIRANPNLVIMVIVFSSGHVEHVHLASDIPFSNDKLNTISNFVTNKLTEFNQNLQDDIVSFVQSEQEEIFINKLINTMNNHISNQSNSIYMGGKVKLIDALNESNVSSIQPILQYIESNRIAELLQDISSPNINVKIGNEIDDSLSDISIVTSQYHFDETLKGQIAVIGPTAMHYQNVIQLLNRIW
>NZ_CP047807.1|WP_000182211.1|408196_408823_+|nucleotide-exchange-factor-GrpE
MTNKDESVEKNTESTVEETNIKQNIDDSVEQAEESKGHLQDEAIEETSDENVIEEIDPKDQKINELQQLADENEEKYLRLYAEFENYKRRIQKENEINKTYQAQRVLTDILPAIDNIERALQIEGDDETFKSLQKGVQMVHESLINALKDNGLEVIKTEGEAFDPNIHQAVVQDDNPDFESGEITQELQKGYKLKDRVLRPSMVKVNQ
>NZ_CP047807.1|WP_000034716.1|408891_410724_+|molecular-chaperone-DnaK
MSKIIGIDLGTTNSCVTVLEGDEPKVIQNPEGSRTTPSVVAFKNGETQVGEVAKRQAITNPNTVQSIKRHMGTDYKVDIEGKSYTPQEISAMILQNLKNTAESYLGEKVDKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKTDKDEKVLVFDLGGGTFDVSILELGDGVFEVLSTAGDNKLGGDDFDQVIIDYLVAEFKKENGVDLSQDKMALQRLKDAAEKAKKDLSGVSQTQISLPFISAGENGPLHLEVNLTRSKFEELSDSLIRRTMEPTRQAMKDAGLTNSDIDEVILVGGSTRIPAVQEAVKKEIGKEPNKGVNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIEILGGRMNTLIERNTTIPTSKSQIYSTAVDNQPSVDVHVLQGERPMAADNKTLGRFQLTDIPPAERGKPQIEVTFDIDKNGIVNVTAKDLGTNKEQRITIQSSSSLSDEEIDRMVKDAEVNAEADKKRREEVDLRNEADSLVFQVEKTLTDLGENIGEEDKKSAEEKKDALKTALEGQDIEDIKSKKEELEKVIQELSAKVYEQAAQQQQQAQGANAGQNNDSTVEDAEFKEVKDDDKK
>NZ_CP047807.1|WP_047928473.1|410859_411999_+|molecular-chaperone-DnaJ
MAKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSGQEFEEACPTCHGKGTENKTVKLEVKVPEGVDNEQQIRLTGEGSPGVNGGPAGDLYVVFRVKPSETFKRDGDDIYYKLNVSFPQAALGDEIKIPTLNNEVMLTIPAGTQTGKQFRLKEKGIKNVHGYGYGDLYVDIKVVTPTKLTDRQKELMKEFAQLNGEEINEQPSNFKDRAKRFFKGE
>NZ_CP047807.1|WP_001104607.1|412002_412941_+|50S-ribosomal-protein-L11-methyltransferase
MNWTELSIIINHEAVELATNILENHGSNGVVIEDSDDLINQPEDKYGEIYALKKEDYPDKGVRLKAYFNEMTYDDKLRQQIKDELLNLDELDQHNIQFSEQIIAETDWENEWKNYFHPFRASKKFTIVPSWETYAKEADEELCIELDPGMAFGTGDHPTTSMCLKAIETYVLPQHSVIDVGTGSGILSIASHLIGVKRIKALDIDEMAVSVAKENFRRNHCETLIEAVPGNLLKDETEKFDIVIANILAHIIDEMIEDAYNTLNEGGYFITSGIIKEKYEGIQSHMERVGFKIISEQHDNGWVCLVGQKVSE
>NZ_CP047807.1|WP_001190127.1|412942_413695_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFIDQNADVSQRFFITKKEDIHHITNVMRYDVGSKIILTFNDQTVYLCEIADITSDKIEVDLKEKQNINTELPVDVTICSGLIKADKYEWLLQKATELGASSFIAVSMERSIVKLNEAKVAKKIERWQKIIKEAAEQSYRLVIPSIQFESNLKLICDTIDNYDYILIAYEEEAKDGELSNFKQTLQQFKAQDKVLMIFGPEGGLSENEISLFSNTSTVVGLGPRILRAETAPLYALSAISYEKELMG
>NZ_CP047807.1|WP_000108667.1|413701_415048_+|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MSTVAFHTLGCKVNHYETEAIWQLFKEANYERVDFEANADVFVINTCTVTNTGDKKSRQIIRRAIRQNPDAVICVTGCYAQTSSAEIMEIPGVDVVVGTQDRHKLLGYIDEFRKERQPINGVGNIMKNRKYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEKVVEQATQLVNSGYKEIVLTGIHTGGYGQDLKDYNLAQLLRDLETINGLERIRISSIEASQLTDEVIDVLERSTKVVRHLHIPLQSGSDTVLKRMRRKYTMDRFSERLTKLHKALPDLAVTSDVIVGFPGETEAEFQETYDFIVKHKFSELHVFPYSPRIGTPAARMDDQIDEEIKNERVHKLITLSNQLGKLYASKFDQDVLEVIPEEQGDTEGTLVGYADNYMKVQFEGDESLIGQIVKVKITQANYPLNEGQAIKVVDFATNKSDREVLV
>NZ_CP047807.1|WP_000048060.1|415340_415517_+|30S-ribosomal-protein-S21
MSKTVVRKNESLEDALRRFKRSVSKSGTIQEVRKREFYEKPSVKRKKKSEAARKRKFK
>NZ_CP047807.1|WP_001802667.1|415760_416444_+|hypothetical-protein
MTTILESTAGDTWVEQVSNIIVQPIFTLILTCLTFLGFVYQLYSKKINAAGIIATLSLLILFLGFLIQGNVNMHSILIFSIGVILVVIELFVVGAVIGIIGMILITISITTLGDNLLFMLANVIVALILTIVEWVILVKIFNRKIPFLDKVILKDSTNSESGYNSHDNRSHLVGKTAQTVTDLRPAGIIFCENERIDAVSDGNFILRNKTVKILEVEGTRVVVREVD

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Crispr_ID: NZ_CP047807_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_2

864748-864887

Orphan

Consensus_repeat	Method
TCTATGTTGGGGCCCCGCCAACTTGCA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP047807_2

>merge|NZ_CP047807|2|864748-864887|CRISPRCasFinder
TCTATGTTGGGGCCCCGCCAACTTGCACATTTTTGTAAGCTGACTTTTCGCCAGCTTCTATGTTGGGGCCCCCGCCAACTTGCATTGTTTGTTGGAATTGGTGATCCTATTTCTCTCTGTTGTGACCCCGCCAACTTGCA

>NZ_CP047807|2|2|864748-864887|CRISPRCasFinder
TCTATGTTGGGGCCCCGCCAACTTGCA	CATTTTTGTAAGCTGACTTTTCGCCAGCT
TCTATGTTGGGGCCCCCGCCAACTTGC	ATTGTTTGTTGGAATTGGTGATCCTATTTC
TCTCTGTTGTGACCCCGCCAACTTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000669536.1\|865307_865658_-\|complement-inhibitor-SCIN-B	unknown	unknown	gnl\|CDD\|371594
NZ_CP047807.1\|WP_001039659.1\|870422_871223_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP047807.1\|WP_000049483.1\|869327_869831_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|223695
NZ_CP047807.1\|WP_001032814.1\|864356_864542_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000765709.1\|861246_861393_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000857488.1\|862065_863025_+\|beta-channel-forming-cytolysin	unknown	unknown	gnl\|CDD\|273388
NZ_CP047807.1\|WP_047928337.1\|856701_857703_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235269
NZ_CP047807.1\|WP_000791581.1\|865811_866309_-\|fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|289007
NZ_CP047807.1\|WP_031775077.1\|868121_868193_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000231631.1\|863501_863735_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_076692497.1\|861065_861290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000739208.1\|868509_868839_-\|complement-convertase-inhibitor-Ecb	unknown	unknown	gnl\|CDD\|289007
NZ_CP047807.1\|WP_001063559.1\|858959_859685_+\|superantigen-like-protein-SSL13	unknown	unknown	gnl\|CDD\|106307
NZ_CP047807.1\|WP_001074342.1\|855746_856679_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_CP047807.1\|WP_000584398.1\|866567_867074_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_001791787.1\|869032_869200_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000739572.1\|867745_868141_+\|formyl-peptide-receptor	unknown	unknown	gnl\|CDD\|171849
NZ_CP047807.1\|WP_086097871.1\|854018_855524_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP047807.1\|WP_000659313.1\|869823_870411_-\|XTP/dITP-diphosphatase	unknown	unknown	gnl\|CDD\|184835
NZ_CP047807.1\|WP_000041896.1\|859792_860509_+\|superantigen-like-protein-SSL12	unknown	unknown	gnl\|CDD\|171995

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000669536.1\|865307_865658_-\|complement-inhibitor-SCIN-B	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	8.41017e-47
NZ_CP047807.1\|WP_001039659.1\|870422_871223_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	2.38427e-134
NZ_CP047807.1\|WP_000049483.1\|869327_869831_-\|metallophosphoesterase	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	9.74454e-43
NZ_CP047807.1\|WP_000739572.1\|867745_868141_+\|formyl-peptide-receptor	gnl\|CDD\|171849	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed.	1.17946e-62
NZ_CP047807.1\|WP_000857488.1\|862065_863025_+\|beta-channel-forming-cytolysin	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	1.66722e-141
NZ_CP047807.1\|WP_047928337.1\|856701_857703_-\|ornithine-carbamoyltransferase	gnl\|CDD\|235269	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional.	0
NZ_CP047807.1\|WP_000791581.1\|865811_866309_-\|fibrinogen-binding-protein	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	2.84801e-27
NZ_CP047807.1\|WP_000659313.1\|869823_870411_-\|XTP/dITP-diphosphatase	gnl\|CDD\|184835	PRK14822, PRK14822, XTP/dITP diphosphatase.	9.82079e-114
NZ_CP047807.1\|WP_001063559.1\|858959_859685_+\|superantigen-like-protein-SSL13	gnl\|CDD\|106307	PRK13349, PRK13349, superantigen-like protein; Reviewed.	1.29834e-148
NZ_CP047807.1\|WP_001074342.1\|855746_856679_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_CP047807.1\|WP_000739208.1\|868509_868839_-\|complement-convertase-inhibitor-Ecb	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	2.51827e-21
NZ_CP047807.1\|WP_086097871.1\|854018_855524_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP047807.1\|WP_000041896.1\|859792_860509_+\|superantigen-like-protein-SSL12	gnl\|CDD\|171995	PRK13350, PRK13350, superantigen-like protein; Reviewed.	1.29441e-152

>NZ_CP047807.1|WP_001032814.1|864356_864542_+|hypothetical-protein
MNKHINKKAAKLLEDYKKVQQRKSKETDRGCLKSVIMLIVLFFLIIFGIVACSTNVNFFFQ
>NZ_CP047807.1|WP_000231631.1|863501_863735_+|hypothetical-protein
MVFNDWEINVVYSGEHEVVANEKSLFVIDEFYDVAIAIYYLDGKLKVAHVNYGSDFTIDVANKVFELNIQNPNVDEH
>NZ_CP047807.1|WP_000857488.1|862065_863025_+|beta-channel-forming-cytolysin
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN
>NZ_CP047807.1|WP_000765709.1|861246_861393_-|hypothetical-protein
MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRQGIKNDRVE
>NZ_CP047807.1|WP_076692497.1|861065_861290_-|hypothetical-protein
MLIQDRGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQDLRNGKTKLEDARFRTIIKLYSYYVSLKEH
>NZ_CP047807.1|WP_000041896.1|859792_860509_+|superantigen-like-protein-SSL12
MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
>NZ_CP047807.1|WP_001063559.1|858959_859685_+|superantigen-like-protein-SSL13
MNNNITKKIILSTTLLLLGTASTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGIKDQETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPSTDANRYVKKPQNAKIEVILEKSN
>NZ_CP047807.1|WP_047928337.1|856701_857703_-|ornithine-carbamoyltransferase
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRANYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHNQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
>NZ_CP047807.1|WP_001074342.1|855746_856679_-|carbamate-kinase
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
>NZ_CP047807.1|WP_086097871.1|854018_855524_-|YfcC-family-protein
MPGAFMILFILTVVAVIATWVIPAGAYSKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTYERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKTKGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASSVGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKNDPKASYSYEDKDAFEQQWSVLKDDDSAHFTLRKKIILTLFVLPFPIMVWGVMTQGWWFPVMASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEGMISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGGLLITQVLIYS
>NZ_CP047807.1|WP_000669536.1|865307_865658_-|complement-inhibitor-SCIN-B
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSKADAKVALEKIYKEIDEIINR
>NZ_CP047807.1|WP_000791581.1|865811_866309_-|fibrinogen-binding-protein
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR
>NZ_CP047807.1|WP_000584398.1|866567_867074_-|hypothetical-protein
MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
>NZ_CP047807.1|WP_000739572.1|867745_868141_+|formyl-peptide-receptor
MKKNITKVIIASTVIATGLLTHSNDAKAFFSYEWKGLEIAKKLADDEKKDEERADRLIKDAEKERTYTGKTVEDLYVIAKKLGKGNTIAVVRIIDGGKNGYYTFDITRPLEEHRKNIKVVAKGEIDSITWY
>NZ_CP047807.1|WP_031775077.1|868121_868193_+|hypothetical-protein
MRLLGIKKHTELNSCTPNVRKQC
>NZ_CP047807.1|WP_000739208.1|868509_868839_-|complement-convertase-inhibitor-Ecb
MKKNFIGKSILSIAAISLTVSTFAGESHAQTKNAETVKKYNEYQTNFKKQVNKKVVDAQKAVNLFKRTRTVATHRKAQRAVNLIHFQHSYEKKKLQRQIDLVLKYNTLK
>NZ_CP047807.1|WP_001791787.1|869032_869200_-|hypothetical-protein
MKRIVILENVIVDNPIWLNHVDYLVKSVLLKSIKLRFQEVRKFEILVKIMNRIHI
>NZ_CP047807.1|WP_000049483.1|869327_869831_-|metallophosphoesterase
MSKWIIVSDNHTESGVLYQIYEMHPDADVYLHLGDSEFAYDDTELSLFNRVKGNCDFYPEFENEAVAKYNDVKAFYTHGHLYQVNRTRDLLAEKGLELGCLFAFYGHTHVAKYEYINGVHVINPGSISQSRSSMEETYAEVIFDDQTLHGTINFKNRHHETISHTTF
>NZ_CP047807.1|WP_000659313.1|869823_870411_-|XTP/dITP-diphosphatase
MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVISMSGPDMETKVFKGTISGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGKISHRRNAINLLQAFLEGDKNV
>NZ_CP047807.1|WP_001039659.1|870422_871223_-|glutamate-racemase
MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND

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Crispr_ID: NZ_CP047807_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_3

1330506-1330599

Orphan

Consensus_repeat	Method
GGCTTTTATGCAGTTGCTGCACAAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047807_3

>merge|NZ_CP047807|3|1330506-1330599|CRISPRCasFinder
GGCTTTTATGCAGTTGCTGCACAAACAACTGTATTCCTTTACTCCCCTTGAGCTTTAGCGATTAGGGGCTCTTATGCAGTTGCTGCACAAACAA

>NZ_CP047807|3|3|1330506-1330599|CRISPRCasFinder
GGCTTTTATGCAGTTGCTGCACAAACAA	CTGTATTCCTTTACTCCCCTTGAGCTTTAGCGATTAGG
GGCTCTTATGCAGTTGCTGCACAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_001790232.1\|1328413_1329364_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP047807.1\|WP_001018677.1\|1323753_1324128_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
NZ_CP047807.1\|WP_000180145.1\|1336027_1337323_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP047807.1\|WP_001836918.1\|1340018_1340588_-\|DUF443-family-protein	unknown	unknown	gnl\|CDD\|335700
NZ_CP047807.1\|WP_000036088.1\|1321238_1321442_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000633782.1\|1338007_1338544_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP047807.1\|WP_001200748.1\|1333969_1334980_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|181842
NZ_CP047807.1\|WP_000365354.1\|1327639_1328359_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943
NZ_CP047807.1\|WP_000735558.1\|1326213_1326720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_001819741.1\|1333277_1333661_-\|DUF1934-family-protein	unknown	unknown	gnl\|CDD\|226896
NZ_CP047807.1\|WP_000477504.1\|1337362_1337839_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP047807.1\|WP_061743941.1\|1324378_1325167_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP047807.1\|WP_001808006.1\|1321876_1322806_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225778
NZ_CP047807.1\|WP_031588930.1\|1338754_1339693_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381309
NZ_CP047807.1\|WP_000901749.1\|1330714_1331350_-\|endonuclease-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|225140
NZ_CP047807.1\|WP_000169043.1\|1321458_1321683_+\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
NZ_CP047807.1\|WP_001788287.1\|1335478_1336000_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378039
NZ_CP047807.1\|WP_001222133.1\|1325335_1326052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000362967.1\|1326855_1327656_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP047807.1\|WP_001021145.1\|1331619_1333281_-\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234964

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_001790232.1\|1328413_1329364_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	5.19191e-48
NZ_CP047807.1\|WP_001018677.1\|1323753_1324128_+\|transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.77309e-26
NZ_CP047807.1\|WP_000180145.1\|1336027_1337323_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.13106e-150
NZ_CP047807.1\|WP_001836918.1\|1340018_1340588_-\|DUF443-family-protein	gnl\|CDD\|335700	pfam04276, DUF443, Protein of unknown function (DUF443). Family of uncharacterized proteins.	1.03424e-54
NZ_CP047807.1\|WP_000633782.1\|1338007_1338544_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.16348e-26
NZ_CP047807.1\|WP_001200748.1\|1333969_1334980_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|181842	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional.	0
NZ_CP047807.1\|WP_000365354.1\|1327639_1328359_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.6864e-38
NZ_CP047807.1\|WP_001021145.1\|1331619_1333281_-\|arginine--tRNA-ligase	gnl\|CDD\|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
NZ_CP047807.1\|WP_001819741.1\|1333277_1333661_-\|DUF1934-family-protein	gnl\|CDD\|226896	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown].	9.50091e-54
NZ_CP047807.1\|WP_000477504.1\|1337362_1337839_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.13315e-11
NZ_CP047807.1\|WP_061743941.1\|1324378_1325167_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	6.60392e-35
NZ_CP047807.1\|WP_001808006.1\|1321876_1322806_+\|DMT-family-transporter	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	8.35021e-36
NZ_CP047807.1\|WP_031588930.1\|1338754_1339693_-\|aldo/keto-reductase	gnl\|CDD\|381309	cd19083, AKR_AKR11A1_11D1, AKR11A and AKR11D families of aldo-keto reductase (AKR). Bacillus subtilis aldo-keto reductase IolS, also called vegetative protein 147 (VEG147), is a founding member of aldo-keto reductase family 11 member A1 (AKR11A1). It is able to reduce the standard aldo-keto reductase (AKR) substrates DL-glyceraldehyde, D-erythrose, and methylglyoxal in the presence of NADPH, albeit with poor efficiency in vitro. Bacillus aryabhattai aldo keto reductase is a founding member of aldo-keto reductase family 11 member D1 (AKR11D1).	1.82718e-167
NZ_CP047807.1\|WP_000901749.1\|1330714_1331350_-\|endonuclease-III-domain-containing-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	9.55275e-93
NZ_CP047807.1\|WP_000169043.1\|1321458_1321683_+\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	5.21775e-14
NZ_CP047807.1\|WP_001788287.1\|1335478_1336000_-\|hypothetical-protein	gnl\|CDD\|378039	pfam08741, YwhD, YwhD family. This family of proteins are currently uncharacterized. They are around 170 amino acids in length.	8.7406e-98
NZ_CP047807.1\|WP_000362967.1\|1326855_1327656_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.17592e-26

>NZ_CP047807.1|WP_001790232.1|1328413_1329364_-|iron-ABC-transporter-permease
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>NZ_CP047807.1|WP_000365354.1|1327639_1328359_-|HAD-family-hydrolase
MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
>NZ_CP047807.1|WP_000362967.1|1326855_1327656_-|alpha/beta-hydrolase
MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRKMNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV
>NZ_CP047807.1|WP_000735558.1|1326213_1326720_-|hypothetical-protein
MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQSLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTHISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIKLYRIDLEK
>NZ_CP047807.1|WP_001222133.1|1325335_1326052_-|hypothetical-protein
MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL
>NZ_CP047807.1|WP_061743941.1|1324378_1325167_-|alpha/beta-hydrolase
MNKVTINPQIQLTYQIEGKGNPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS
>NZ_CP047807.1|WP_001018677.1|1323753_1324128_+|transcriptional-regulator
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
>NZ_CP047807.1|WP_001808006.1|1321876_1322806_+|DMT-family-transporter
MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGTICLIILNIIINPKVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIATVAGQIIMGVIIDTLGLFGATIHDFNLIKAIGVLLLIIGIVIMNQFNKNNLLLTDQKYLLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSLKLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILIDHFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF
>NZ_CP047807.1|WP_000169043.1|1321458_1321683_+|DUF2922-domain-containing-protein
MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVVRDSMNALVDLNIIKSNSGTITKVHSAQIIDKTTTVLFEDKK
>NZ_CP047807.1|WP_000036088.1|1321238_1321442_+|hypothetical-protein
MSKINHITIVLSFTKVDANGKQTEFKRRFANINPDASNDQIKTFSKLIERLTGETYSNIELIKSLSI
>NZ_CP047807.1|WP_000901749.1|1330714_1331350_-|endonuclease-III-domain-containing-protein
MLGTDELYKLLYRHMGPQNWWPADNDIELMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>NZ_CP047807.1|WP_001021145.1|1331619_1333281_-|arginine--tRNA-ligase
MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
>NZ_CP047807.1|WP_001819741.1|1333277_1333661_-|DUF1934-family-protein
MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE
>NZ_CP047807.1|WP_001200748.1|1333969_1334980_-|alcohol-dehydrogenase-AdhP
MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
>NZ_CP047807.1|WP_001788287.1|1335478_1336000_-|hypothetical-protein
MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
>NZ_CP047807.1|WP_000180145.1|1336027_1337323_-|HD-domain-containing-protein
MTNAFVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLRRIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHHNKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFEETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISELQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIHSITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN
>NZ_CP047807.1|WP_000477504.1|1337362_1337839_-|GNAT-family-N-acetyltransferase
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF
>NZ_CP047807.1|WP_000633782.1|1338007_1338544_-|flavodoxin-family-protein
MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ
>NZ_CP047807.1|WP_031588930.1|1338754_1339693_-|aldo/keto-reductase
MKQFVNLGKSDVEVLPIALGTNAVGGHNLYPNLDEEQGKDVVRQAINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQPEYLKQQVENSLKRLQTDYIDLYYIHFPDDNTPKDQAVAALQELKEQGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDENTKFSDHRTTRRDFIPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVIIPGAKRAEQVIENIKAADIVLSDDEIQYIDELFPIED
>NZ_CP047807.1|WP_001836918.1|1340018_1340588_-|DUF443-family-protein
MLLCESKIINKNPKYRIIKYNDEYLMVDIISTWISLFFPFINWFIPKEYVKISREEFENLNIVKPAKKNVFWPVAGSSALLGVALRKYTHLLDIQLDKKLVIAICCITFIGILIFYVRLIKKSSLNIYNTKNKRSKIFLIPTLKNVCFTLFGYILFGGLTMLFLDALLSMSYQNIIVYFVWIAVIMGFF

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Crispr_ID: NZ_CP047807_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_4

1808329-1808413

Orphan

Consensus_repeat	Method
CACCCCAACTTGCATTGTCTGTAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047807_4

>merge|NZ_CP047807|4|1808329-1808413|CRISPRCasFinder
CACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTCCTCTTTGTTGGGGCCCACACCCCAACTTGCATTGCCTGTAGAA

>NZ_CP047807|4|4|1808329-1808413|CRISPRCasFinder
CACCCCAACTTGCATTGTCTGTAGAA	ATTGGGAATCCAATTCCTCTTTGTTGGGGCCCA
CACCCCAACTTGCATTGCCTGTAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000779492.1\|1814083_1815346_-\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP047807.1\|WP_160179462.1\|1810166_1811654_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143435
NZ_CP047807.1\|WP_000825098.1\|1816286_1816844_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|225059
NZ_CP047807.1\|WP_001013481.1\|1808561_1809521_-\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP047807.1\|WP_000826670.1\|1805302_1806277_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270271
NZ_CP047807.1\|WP_000356963.1\|1808063_1808267_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000706137.1\|1801725_1802751_-\|NAD-dependent-formate-dehydrogenase	unknown	unknown	gnl\|CDD\|181041
NZ_CP047807.1\|WP_000590844.1\|1806290_1807031_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224041
NZ_CP047807.1\|WP_000239647.1\|1818060_1819266_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000723449.1\|1812861_1814007_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP047807.1\|WP_001237004.1\|1812080_1812464_+\|YbaN-family-protein	unknown	unknown	gnl\|CDD\|377291
NZ_CP047807.1\|WP_000171919.1\|1807372_1807885_-\|DUF4242-domain-containing-protein	unknown	unknown	gnl\|CDD\|379428
NZ_CP047807.1\|WP_047928060.1\|1800090_1801341_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP047807.1\|WP_001291007.1\|1816854_1818060_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340825
NZ_CP047807.1\|WP_001092004.1\|1802924_1803284_-\|DUF2294-domain-containing-protein	unknown	unknown	gnl\|CDD\|227896
NZ_CP047807.1\|WP_001230678.1\|1815399_1816287_-\|capsular-polysaccharide-type-5/8-biosynthesis-epimerase-CapN	unknown	unknown	gnl\|CDD\|187543
NZ_CP047807.1\|WP_000197961.1\|1804544_1805306_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP047807.1\|WP_000215724.1\|1791811_1792456_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	unknown	unknown	gnl\|CDD\|225002
NZ_CP047807.1\|WP_000480603.1\|1812470_1812797_+\|staphylobilin-forming-heme-oxygenase-IsdI	unknown	unknown	gnl\|CDD\|183968
NZ_CP047807.1\|WP_000171648.1\|1803500_1804532_-\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|224871

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000779492.1\|1814083_1815346_-\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP047807.1\|WP_160179462.1\|1810166_1811654_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143435	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.	0
NZ_CP047807.1\|WP_000825098.1\|1816286_1816844_-\|sugar-transferase	gnl\|CDD\|225059	COG2148, WcaJ, Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis, outer membrane].	3.08096e-87
NZ_CP047807.1\|WP_001013481.1\|1808561_1809521_-\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	3.08716e-108
NZ_CP047807.1\|WP_000826670.1\|1805302_1806277_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270271	cd13553, PBP2_NrtA_CpmA_like, Substrate binding domain of ABC-type nitrate/bicarbonate transporters, a member of the type 2 periplasmic binding fold superfamily. This subfamily includes nitrate (NrtA) and bicarbonate (CmpA) receptors. These domains are found in eubacterial perisplamic-binding proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding their ligand with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. These binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.66137e-50
NZ_CP047807.1\|WP_000706137.1\|1801725_1802751_-\|NAD-dependent-formate-dehydrogenase	gnl\|CDD\|181041	PRK07574, PRK07574, NAD-dependent formate dehydrogenase.	0
NZ_CP047807.1\|WP_000590844.1\|1806290_1807031_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224041	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism].	6.91027e-113
NZ_CP047807.1\|WP_000723449.1\|1812861_1814007_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP047807.1\|WP_001237004.1\|1812080_1812464_+\|YbaN-family-protein	gnl\|CDD\|377291	pfam04304, DUF454, Protein of unknown function (DUF454). Predicted membrane protein.	5.80598e-41
NZ_CP047807.1\|WP_000171919.1\|1807372_1807885_-\|DUF4242-domain-containing-protein	gnl\|CDD\|379428	pfam14026, DUF4242, Protein of unknown function (DUF4242). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and archaea. Proteins in this family are typically between 90 and 170 amino acids in length. There is a single completely conserved residue C that may be functionally important.	2.56603e-26
NZ_CP047807.1\|WP_047928060.1\|1800090_1801341_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.65394e-72
NZ_CP047807.1\|WP_001291007.1\|1816854_1818060_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	1.43416e-72
NZ_CP047807.1\|WP_001092004.1\|1802924_1803284_-\|DUF2294-domain-containing-protein	gnl\|CDD\|227896	COG5609, COG5609, Uncharacterized conserved protein [Function unknown].	6.06834e-49
NZ_CP047807.1\|WP_001230678.1\|1815399_1816287_-\|capsular-polysaccharide-type-5/8-biosynthesis-epimerase-CapN	gnl\|CDD\|187543	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.08984e-118
NZ_CP047807.1\|WP_000171648.1\|1803500_1804532_-\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	1.07089e-20
NZ_CP047807.1\|WP_000215724.1\|1791811_1792456_-\|4'-phosphopantetheinyl-transferase-superfamily-protein	gnl\|CDD\|225002	COG2091, Sfp, Phosphopantetheinyl transferase [Coenzyme metabolism].	4.82986e-62
NZ_CP047807.1\|WP_000480603.1\|1812470_1812797_+\|staphylobilin-forming-heme-oxygenase-IsdI	gnl\|CDD\|183968	PRK13313, PRK13313, staphylobilin-forming heme oxygenase IsdI.	1.40112e-64
NZ_CP047807.1\|WP_000197961.1\|1804544_1805306_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	1.22607e-73

>NZ_CP047807.1|WP_000356963.1|1808063_1808267_+|hypothetical-protein
MDKESVVASLARNKKIAVETMAGQRYIIERILHTNDEKHIHILKPKDVVLDVDSIKEIDENHLNDAT
>NZ_CP047807.1|WP_000171919.1|1807372_1807885_-|DUF4242-domain-containing-protein
MTLFLLEANNLDFASTKEELEAKAASLSTKTIPTLIEVQATENLTHGYFIVEANDEAEAKQFLTEADISIQLVKEVRLVGKDLDEVKNGDAHVDYLVTWNIPEGITMDQYLARKKKNSVHYEEVPEVEFKRTYVCEDMSKCICLYNAPDEEAVRRARKAVDTPIDGIEKL
>NZ_CP047807.1|WP_000590844.1|1806290_1807031_-|ABC-transporter-ATP-binding-protein
MIKIQQLQHHFGSHKVIHNFNLDISKGEIVTFIGKSGCGKSTLLNIIGGFIHPSSGRVIIDNEIKQQPSPDCLMLFQHHNLLPWKTINDNIRIGFQQKISDEEINAQLKLVDLEGRGKHFPEQLSGGMKQRVALCRAHVHKPNVILMDEPLGALDAFTRYKLQDQLVQLKHKTQSTIILVTHDIDEAIYLSDRIVLLGEGCNIISQYEITASHPRSRNDSHLLKIRNEIMETFALNHHQVEPEYYL
>NZ_CP047807.1|WP_000826670.1|1805302_1806277_-|ABC-transporter-substrate-binding-protein
MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGHHEGNVIMGQKGMHLNEFNNNDDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKMNDRKQSVDIMTHHFKQSRDVLTQSAAWTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS
>NZ_CP047807.1|WP_000197961.1|1804544_1805306_-|ABC-transporter-permease
MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE
>NZ_CP047807.1|WP_000171648.1|1803500_1804532_-|acyl-CoA/acyl-ACP-dehydrogenase
MTLETLIKEQLDPHLVEVDEGTYYPRTFIQQLFVDGYFGEAALRKNAEVIEAVSQSCLTTGFCLWCQLAFSTYLENATQPHLNNDLQQQLLSGEILGATGLSNPMKSFNDLEKLNLEHTYVDGQLVVSGRMPAVSNIQEDHYFGAISKHESSDEFVMFILRANQDGITLVEKTNFLGVNGSATYQITLNQVVVPQSQIITHDAKQFAATIRPQFIAYQIPIGLGSIKSSLELIDAFSNVQNGINQYLEYDVEAFKKRYRQLREEYYAILDDGNLTSHLNELISLKKDIGYLLLDVNQASVVNGGSRAYTPYSPQVRKLKEGFFFAALTPTLRHLGKLEAELKG
>NZ_CP047807.1|WP_001092004.1|1802924_1803284_-|DUF2294-domain-containing-protein
MNTIDTHTKEQQFSNLVRSYRKEYVGKGPNSIRVSFKDNWAIAHMTGVLSKVESFYLNDKRNESMLHYTRTEKIKQMYKEIDVNEMESLVGAKFVKLFTDIDLNDDEVISIFVFDKSIE
>NZ_CP047807.1|WP_000706137.1|1801725_1802751_-|NAD-dependent-formate-dehydrogenase
MKIVALFPEAVEGQENQLLNTKKALGLKTFLEERGHEFIILADNGEDLDKHLPDMDVIISAPFYPAYMTRERIEKAPNLKLAITAGVGSDHVDLAAASEHNIGVVEVTGSNTVSVAEHAVMDLLILLRNYEEGHRQSVEGEWNLSQVGNHAHELQHKTIGIFGFGRIGQLVAERLAPFNVTLQHYDPINQQDHKLSKFVSFDELVSTSDAITIHAPLTPETDNLFDKDVLSRMKKHSYLVNTARGKIVNRDALVEALASEHLQGYAGDVWYPQPAPADHPWRTMPRNAMTVHYSGMTLEAQKRIEDGVKDILERFFNHEPFQDKDIIVASGRIASKSYTAK
>NZ_CP047807.1|WP_047928060.1|1800090_1801341_-|MFS-transporter
MKRLSTTLKVRLISNFLQLIITTAFIPFIALYLTDMLSQSIVGIYLVGLVVLKFPLSIISGYFIEIFPKKLLVLIYQATMVIMLVFMGVFGSHQLWQIIGFCVAYAIFTIVWGLQFPVMDTLIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSMLLLFLIAACIFLIVLFILYIWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLVLKDRNYMLLISGFSIIMMGEFSISSYIAIRLKDQFETISIGSYDITGAKMLAILLMINTVVVILLTYSISKVVLKIDFKKALITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEIIYSPIVSEQRFKIIPKAKRGTYSAVNALGIHFSETLARLGIVLGVFLTSLQMGLYMFIVLTIGASMLVAGVFGGQKQVNTN
>NZ_CP047807.1|WP_000215724.1|1791811_1792456_-|4'-phosphopantetheinyl-transferase-superfamily-protein
MTVFVMQLQSNLKSIEELISQSRWSYKKPRTVNYRYNQDKLMHRLGDILVQYGIQHDTGLLPHEWHYHISPRGKADIVQHNRDGQPIYVSLSYSYPYIVCVVDKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQICSLNDFYQIWTQKESFTKLIGEGLIKGLDIYDMTQSHFYQSREVKFKQFIFDQFMVQVCFLGQAPWGYKKVSVFQLLSS
>NZ_CP047807.1|WP_001013481.1|1808561_1809521_-|cation-transporter
MNGKKANTINRYKYFHHVNHQKIQQSSKKTLWASLIITLLFTVIEFVGGLVSNSLALLSDSFHMLSDVLALGLSMLAIYFASKKPTARYTFGYLRFEILAAFLNGLALIVISIWILYEAIVRIIYPQPIESGIMFMIASIGLLVNIILTIILVRSLKQEDNINIQSALWHFMGDLLNSIGVIVAVVLIYFTGWRIIDPIISIVISLIILRGGYKITRNAWLILMESVPQHLDTDQIMADIKNIDGILDVHEFHLWSITTEHYSLSAHVVLDKKYEGDDYQAIDQVSSLLKEKYGIAHSTLQIENLQLNPLDEPYFDKLT
>NZ_CP047807.1|WP_160179462.1|1810166_1811654_-|aldehyde-dehydrogenase-family-protein
MAVNVRDYIAENYGLFINGEFVKGSSDEKIEVTNPATGETLSHITRAKDKDVDHAVKVAQEAFESWSLTSKSERAQMLRDIGDKLMAQKDKIAMIETLNNGKPIRETTAIDIPFAARHFHYFASVIETEEGTVNDIDKDTMSIVRHEPIGVVGAVVAWNFPMLLAAWKIAPAIAAGNTIVIQPSSSTPLSLLEVAKIFQEVLPKGVVNILTGKGSESGNAIFNHDGVDKLSFTGSTDVGYQVAEAAAKHLVPATLELGGKSANIILDDANLDLAVEGIQLGILFNQGEVCSAGSRLLVHEKIYDQLVPRLQEAFSNIKVGDPQDEATQMGSQTGKDQLDKIQSYIDAAKESDAQILAGGHRLTENGLDKGFFFEPTLIAVPDNHHKLAQEEIFGPVLTVIKVKDDQEAIDIANDSEYGLAGGVFSQNITRALNIAKAVRTGRIWINTYNQVPEGAPFGGYKKSGIGRETYKGALSNYQQVKNIYIYTSNALKGLY
>NZ_CP047807.1|WP_001237004.1|1812080_1812464_+|YbaN-family-protein
MRLILIVIGLIFTALGIAGAVLPLLPTTPFLLVAVFCFARSSDRFYNWLINQKIYKEYVENFYLHRGYTLQQKIKILISLYIVIGFSIYMVDVLAVRVGLIIMVIIQTAVLFTFVKTLPKSNHKIEE
>NZ_CP047807.1|WP_000480603.1|1812470_1812797_+|staphylobilin-forming-heme-oxygenase-IsdI
MFMAENRLQLQKGSAEETIERFYNRQGIETIEGFQQMFVTKTLNTEDTDEVKILTIWESEDSFNNWLNSDVFKEAHKNVRLKSDDDGQQSPILSNKVFKYDIGYHYQK
>NZ_CP047807.1|WP_000723449.1|1812861_1814007_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKKIMVIFGTRPEAIKMAPLVKEIDHNGNFEANIVITAQHRDMLDSVLSIFDIQADHDLNIMQDQQTLAGLTANALAKLDSIINEEQPDMILVHGDTTTTFVGSLAAFYHQIPVGHVEAGLRTHQKYSPFPEELNRVMVSNIAELNFAPTVIAAKNLLFENKDKERIFITGNTVIDALSTTVQNDFVSTIINKHKGKKVILLTAHRRENIGEPMHQIFKAVRDLADEYKDVVFIYPMHRNPKVRAIAEKYLSGRNRIELIEPLDAIEFHNFTNQSYLVLTDSGGIQEEAPTFGKPVLVLRNHTERPEGVEAGTSRVIGTDYDNIVRNVKQLIEDDEAYQRMSQANNPYGDGQASRRICEAIEYYFGLRPDKPDEFVPLRHK
>NZ_CP047807.1|WP_000779492.1|1814083_1815346_-|nucleotide-sugar-dehydrogenase
MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQSGQISIEEPGLQEIYEEVLSSGKLKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLEKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDICLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAGKYVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPRVNIHQPGPGVGGHCLAVDPYFIIAKDPENAKLIQTGREINNSMPAYVVDTTKQIIKALSGNKVTVFGLTYKGDVDDIRESPAFDIYELLNQEPDIEVCAYDPHVELDFVEHDMSHAVKDASLVLILSDHSEFKNLSDSHFDKMKHKVIFDTKNVAKSSFEDVSYYNYGNIFNFIDK
>NZ_CP047807.1|WP_001230678.1|1815399_1816287_-|capsular-polysaccharide-type-5/8-biosynthesis-epimerase-CapN
MRKNILITGVHGYIGNALKDKLIEQGHQVDQINVRNQLWKSTSFKDYDVLIHTAALVHNNSPQARLSDYMQVNMLLTKQLAQKAKAEDVKQFIFMSTMAVYGKEGQVGKSDQIDTQTPMNPTTNYGISKKFAEQALQELISDSFKVAIVRPPMIYGAHCPGNFQRLMQLSKRLPIIPNINNQRSALYIKHLTAFIDQLISLEVTGVYHPQDSFYFDTSSVMYEIRRQSHRKTVLINMPSVLNKYFNKLSVFRKLFGNLIYSNTLYENNNALEVIPGKMSLVIADIMDETTTKDKA
>NZ_CP047807.1|WP_000825098.1|1816286_1816844_-|sugar-transferase
MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTGKVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTHQSMMLDMYIIYKTIKNIVTSEGVHH
>NZ_CP047807.1|WP_001291007.1|1816854_1818060_-|glycosyltransferase-family-4-protein
MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVAKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPEMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQDMETLISFLKLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKALVLIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINTHSSKELHEMGERAHQLFKDKYTREINTMKYYNLLK
>NZ_CP047807.1|WP_000239647.1|1818060_1819266_-|capsular-polysaccharide-biosynthesis-protein
MVKKVFIMDSVKTIIGTLLIALGLQFLAYPIINQRVGNEAFGSILTIYTIITITSVVLGNTLNNIRLINMNLYKSNHYYWKFVSILLISILIESIALIIVFLYFFNLNTIDIIFLILLNILMCLRIYLNVFFRMTLKYNQILYIALIQFLGLLIGLFLYYLIQNWIVCFITSELFATIYTLVKLRGLTIGEYQSEDNNVVKDYVMLLSTNSLNNLNLYLDRLILLPIIGGTAVTISFLSTFIGKMLATFLYPINNVVLSYISVNESDNIKKQYLKTNLFAIAALCLVMIICYPITLIIVSLLYNIDSSLYSKFIILGNIGVLFNAVSIMIQTLNTKHASITLQANYMTLHTITFIFITILMTIAFGLNGFFWTTLFSNIIKYVILNIIGLKSKFINKKDVD

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Crispr_ID: NZ_CP047807_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_5

2172963-2173096

Orphan

Consensus_repeat	Method
TATTGAAGAAGATACAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP047807_5

>merge|NZ_CP047807|5|2172963-2173096|PILER-CR
TATTGAAGAAGATACAAACAAAGACAAACCTAATTATCAATTCGGTGGACACAACATTGTTGATTTTGAAGAAGATACACTTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAACGATTGAAGAAGATACAA

>NZ_CP047807|5|1|2172963-2173096|PILER-CR
TATTGAAGAAGATACAA	ACAAAGACAAACCTAATTATCAATTCGGTGGACACAACATTGTTGA
TTTTGAAGAAGATACAC	TTCCAAAAGTAAGCGGCCAAAATGAAGGTCAACAAAC
GATTGAAGAAGATACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000586384.1\|2161880_2163704_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP047807.1\|WP_000966095.1\|2178296_2179490_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP047807.1\|WP_000217714.1\|2179811_2180120_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_078104178.1\|2170028_2170331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000481425.1\|2168638_2169997_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NZ_CP047807.1\|WP_000581876.1\|2186835_2187621_+\|tandem-type-lipoprotein	unknown	unknown	gnl\|CDD\|367972
NZ_CP047807.1\|WP_000289134.1\|2164489_2165182_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP047807.1\|WP_072398205.1\|2179500_2179704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_001117047.1\|2163842_2164259_+\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP047807.1\|WP_000990133.1\|2166264_2166945_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP047807.1\|WP_061743978.1\|2166968_2168522_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP047807.1\|WP_047928629.1\|2174288_2177075_+\|fibronectin-binding-protein-FnbB	unknown	unknown	gnl\|CDD\|371043
NZ_CP047807.1\|WP_000446878.1\|2182739_2184209_+\|DNA-mismatch-repair-protein-MutH	unknown	unknown	gnl\|CDD\|238326
NZ_CP047807.1\|WP_000074005.1\|2165346_2166111_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP047807.1\|WP_001033636.1\|2184308_2185547_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|273211
NZ_CP047807.1\|WP_000660709.1\|2159693_2160971_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP047807.1\|WP_078104177.1\|2180813_2182622_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP047807.1\|WP_001790696.1\|2170379_2170481_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000678764.1\|2180263_2180530_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000721335.1\|2177254_2178121_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000586384.1\|2161880_2163704_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	3.71047e-89
NZ_CP047807.1\|WP_000966095.1\|2178296_2179490_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.6361e-57
NZ_CP047807.1\|WP_078104177.1\|2180813_2182622_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP047807.1\|WP_000481425.1\|2168638_2169997_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.53789e-168
NZ_CP047807.1\|WP_000581876.1\|2186835_2187621_+\|tandem-type-lipoprotein	gnl\|CDD\|367972	pfam04507, DUF576, Csa1 family. This family contains several uncharacterized staphylococcal proteins. These proteins have been called conserved staphylococcal antigens (Csa).	8.4195e-132
NZ_CP047807.1\|WP_000289134.1\|2164489_2165182_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	5.59791e-85
NZ_CP047807.1\|WP_000074005.1\|2165346_2166111_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	2.57514e-33
NZ_CP047807.1\|WP_000990133.1\|2166264_2166945_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.91306e-44
NZ_CP047807.1\|WP_061743978.1\|2166968_2168522_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP047807.1\|WP_047928629.1\|2174288_2177075_+\|fibronectin-binding-protein-FnbB	gnl\|CDD\|371043	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin. This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.	2.32022e-33
NZ_CP047807.1\|WP_000446878.1\|2182739_2184209_+\|DNA-mismatch-repair-protein-MutH	gnl\|CDD\|238326	cd00583, MutH_Sau3AI, MutH is a 28kD endonuclease involved in methyl-directed DNA mismatch repair in gram negative bacteria. MutH is both sequence-specific and methylation-specific, introducing a nick in the unmethylated strand of a hemi-methylated d(GATC) DNA duplex. MutH is homologous to the type II restriction endonuclease Sau3AI which also recognizes the d(GATC) sequence however, Sau3AI cleaves both strands regardless of their methylation state. The active form of MutH is monomeric while that of Sau3AI is homodimeric. In addition to MutH, MutS, involved in mismatch recognition, and MutL, involved in mediating the interactions between MutH and MutS, are essential in initiating mismatch repair in Escherichia coli.	2.93063e-77
NZ_CP047807.1\|WP_000721335.1\|2177254_2178121_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	2.36422e-176
NZ_CP047807.1\|WP_001033636.1\|2184308_2185547_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|273211	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm). All proteins in this family for which functions are known are DNA-cytosine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	3.05785e-111
NZ_CP047807.1\|WP_000660709.1\|2159693_2160971_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.24287e-91
NZ_CP047807.1\|WP_001117047.1\|2163842_2164259_+\|DUF2188-domain-containing-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	9.39579e-63

>NZ_CP047807.1|WP_001790696.1|2170379_2170481_+|hypothetical-protein
MLLKTEQYRLAFIKFKKLMNFAFKGRYYSEKQS
>NZ_CP047807.1|WP_078104178.1|2170028_2170331_+|hypothetical-protein
MQYIALKHVYFYAENRLKYSKSERYKKYIGYFRVMKGVSRHVFVRIVQAIIMKRLVYCFKLDNDEFNLKNKYKKYKPCVTRVSDDFNTIYRYIPNNKIIN
>NZ_CP047807.1|WP_000481425.1|2168638_2169997_+|gluconate-permease
MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALMLGIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHVQWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKVAQKMIPSAYTREGDISALGAQKEFTDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTAGTAMLIAVLFAIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGGVGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV
>NZ_CP047807.1|WP_061743978.1|2166968_2168522_+|gluconokinase
MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYVMRESKVNKDDIKFVSFSAQMHSLIAMDQKHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLVKIFWMKHEWQDVFQRTAKFADIKTYIFYHLFDTHIIDYSMASATGMFNLETLDWDVGALELLGISKEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPFEENVAVYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
>NZ_CP047807.1|WP_000990133.1|2166264_2166945_+|GntR-family-transcriptional-regulator
MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
>NZ_CP047807.1|WP_000074005.1|2165346_2166111_+|MerR-family-transcriptional-regulator
MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMICYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHMSTEQLEISRIQHNN
>NZ_CP047807.1|WP_000289134.1|2164489_2165182_+|GTP-pyrophosphokinase-family-protein
MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHIYSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAKEHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSIPVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNKAETEKYRDLLKECATEITEVENKLQQIHSEITE
>NZ_CP047807.1|WP_001117047.1|2163842_2164259_+|DUF2188-domain-containing-protein
MPFTMKGYPEKWKDFEVIKRQKAIEIANAMLKEGYLEKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
>NZ_CP047807.1|WP_000586384.1|2161880_2163704_+|FUSC-family-protein
MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDNFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELNAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDKTLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLATFENIAKHLELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV
>NZ_CP047807.1|WP_000660709.1|2159693_2160971_+|MFS-transporter
MKEKRTNVRWMFALAFFFIGVIAYMDRANISYIAKQMMDDLGMTKPQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMITIALVWWSAFTILTGMIKNHGLIYLVRFLFGVGEAPMYPSNAVFNSFWFSKNEKGRASSALLAGSYFGPVLAPIVTIAIVNAFNWQAVFYIFGAVGILMAVLWAIIAKDLPEQHRMVNEAEKRFIMENRDIVATEKSSPPWNDFFKRFSFYAIAIQYFVVQFIITLFLIWLPTYLTEVFHVNFKEMSISSLPWLLMFFLILSAGAISDRVLGLGRSKFVARGVIAIAGFIVFAVSIIFAVRTGNLYVSIFWLSLGLGGIGISMGMSWAAATDLGRNFSGTVSGWMNLWGNIGALISPLLAGLFVEHLGWTMTFQLLIVPAVIAVIMWFYVKPDQPLIVSDDKAIEK
>NZ_CP047807.1|WP_047928629.1|2174288_2177075_+|fibronectin-binding-protein-FnbB
MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQKNTTVEESGSSATESKASETQTTTNNVNTIDETQSYSATSTEQPSKSTQVTTEEAPKTVQAPKVETSRVDLPSEKVADKETTGTQVDTAQPSNVSEIKPRMKRSADVAEVAEKEVVGEAKTTGTDVTSKVEVTESSLEGHNKDSNIVNPHNAERVTLKYKWKFGEGIKKGDYFDFTLSNNVETHGISTLRKVPEIKSTDGQVMATGEVIEERKIRYTFKEYVKDKKDLTAELSLNLFIDPTTVTKKGKQKVEVSLGQNKISQEFDIQYLDGVKNPMGVTVNGRIHTLNKEEGKFSHFAYVKPNNQSLSSVTVTGQVTSGYKQNAKNPTVKVYKHIGSDELAESVYAKLDDTNKFEDVTNNMSLEFDTNGGYSLNIRDLDKTKDYVIKYEGDYDVNSRELNFQTHLLGYHNGYYSYYPSNLTWNNGVAFYSNNAQGDGKDKPNDPIIEKSEPIELDIKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEGVEGHAEGIVETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDEESTKGIVTGAVSDHTTIEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENNHHISHSGLGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIHGQNKGDQSFEEDTEKDKPKYEHGGNIIDIDFDSVPQIHGFNKHNEIIEEDTNKDKPNYQFGGHNSVDFEEDTLPQVSGHNEGQQTIEEDTTPPIVPPTPPTPEVPSEPETPTPPTPEVPSEPETPTPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPTKQKQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRRNKKNHKA
>NZ_CP047807.1|WP_000721335.1|2177254_2178121_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTQFIKALGL
>NZ_CP047807.1|WP_000966095.1|2178296_2179490_+|MFS-transporter
MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQSSLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKKILYLSDLILSLIIIIIPLLAITSNLNYLTLLTISTAITIINCYTDPAFRAILPEIIDEEHLATSNALIDSLQRGSNIILPALIGVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKEDFSETWEFLKKSKEIPFIIIIQFACILINTGLWRVALPLFISNILKEGVGVYGLATSCLGIASLLMSLIMGLLSEKRLIFKFSIGVLVWGIGLSIINVFPSVAILYIGATLVGLGQSIEGLTRSVAIQIKTPNHLMGKVFSISSTSNYAADTLSLGLISLIIPLLSLSNIFISGGAIISMLSLSGLKFFKKSM
>NZ_CP047807.1|WP_072398205.1|2179500_2179704_+|hypothetical-protein
MLINAIKVGIEMKYKISLAYNLAIIIGSLIILCILISRGYDIYVILIPILTILASLINLICDIKKHK
>NZ_CP047807.1|WP_000217714.1|2179811_2180120_-|hypothetical-protein
MTVNIVFSIVFCISMVILGIYVAITKDFTLISYINQTTIADKHKNQIAYIFTLCISLSAVFLMSSILCFEYDFIALSFLFLTIALLLIALFYVCFYKITKYP
>NZ_CP047807.1|WP_000678764.1|2180263_2180530_-|hypothetical-protein
MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAHTLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD
>NZ_CP047807.1|WP_078104177.1|2180813_2182622_-|phospho-sugar-mutase
MHFHTHLLYNTCEKYCLWAVFFYFWGVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLARYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPISKQNTSYIKSFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLQSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANKNHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKINAIMTKFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS
>NZ_CP047807.1|WP_000446878.1|2182739_2184209_+|DNA-mismatch-repair-protein-MutH
MESYLTKQAVHNRAKEAVGKSVLELNGGESIKQSKSSVGDAFENWFGKKKDSDSKPDMAEAGVELKATPFKKLKNGKYSSKERLVLNIINYEKVANENFETSSFLSKNNTIELAFYEYIKGTPSDNWIIKEAVLYEMHKNPIDYEIIKQDWEIINQYINEGKAHELSEGLTSYLAPCTKGANASSLRNQPYSDIKAKQRAFSLKSGYMTSILRKYVLGDEKIDSIVKDPFEIKEKSIEDIVFEKFQPYINWSIDKLCEHFSINKGEKGLNYRIASAILNLKGKTTKSKPFPEVEEFEKSSIVVKTVHFNKKNVNKESMSFGAFKFEELANEEWEDSEGYPSAQWRNFLLETRFLFFVVKEDEDGVDIFKGIKFFSMPEEDINGPVKRMWDDTVKKLKEGVTLEAVPDKSTKDGWRIKNNFVDKSDDLICHVRPHTNNRDYRGGSNADKLPKKINWINRPDSDDYSDEWMTKQSFWINNDYIKKQVEDLL
>NZ_CP047807.1|WP_001033636.1|2184308_2185547_+|DNA-cytosine-methyltransferase
MNKIKVVELFAGVGGFRLGLENTKNGIFDITWANQWEPSRKIQHAFDCYSKRFKNGIHSNKDIAQVSDEEMANTEADMIVGGFPCQDYSVARSLNGELGIQGKKGVLFWQIIRYIQNTFPKYLLLENVDRLLKSPSSQRGRDFAVMLSTLNELGYNVEWRVINAADYGNAQRRRRVFIFGYKQDLNYSKAMEESPLDKIIYHNGLFAEAFPIEDYANKNRVNRTHITHDIVDISDNFSFQFYNSGIMKNGEILTIDTIPKYEKSVTLGEIIESNVDDGFSLNQDQIDKFKYLRGPKKIKRTTKDGHEYYFSEGGMSETDSLELPARTMLTSESSINRSTHFLNVDGVYRTLTPIEAERLNGFPDNWTEGMPIKMRYFCMGNALVVPLITRIGNQIEKIDSITNDEFSQLRLF
>NZ_CP047807.1|WP_000581876.1|2186835_2187621_+|tandem-type-lipoprotein
MIHSKKLTLGICLVLLIILIGGCVIMTKTNGRNAQIKENFNKTLSVYPTKNLDDFYDKEGFRDQEFDKRDKGTWIIYSEMVIEPKGKNMESRGMVLYINRNTRTTKGNFIVTEITEDSKGYSRSKEKKYPVKMENNRIIPTKPIPDDKLKKEIENFKFFVQYGNFKDFKDYKNGDISYNPNVPSYSAKYQLNNDDYNVQQLRKRYHIPTKQAPELKLKGSGNLKGSSVGSKDLEFTFVENQEENIYFSDSVEFTPSEDDKS

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Crispr_ID: NZ_CP047807_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_6

2519582-2519667

Orphan

Consensus_repeat	Method
ACTAATGATACGCAAACATCAGTTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047807_6

>merge|NZ_CP047807|6|2519582-2519667|CRISPRCasFinder
ACTAATGATACGCAAACATCAGTTGGCCCAGTTGCAAACAATAAAGCTAAAGATATGCAAACTAATGATACGCAAAAATCAGTTGG

>NZ_CP047807|6|5|2519582-2519667|CRISPRCasFinder
ACTAATGATACGCAAACATCAGTTGG	CCCAGTTGCAAACAATAAAGCTAAAGATATGCAA
ACTAATGATACGCAAAAATCAGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000347896.1\|2509072_2509882_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP047807.1\|WP_000521495.1\|2510842_2512198_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP047807.1\|WP_001141006.1\|2499126_2500569_+\|multidrug-efflux-MFS-transporter-LmrS	unknown	unknown	gnl\|CDD\|129794
NZ_CP047807.1\|WP_000648723.1\|2520289_2521396_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP047807.1\|WP_000884746.1\|2494820_2496008_+\|UDPGP-type-1-family-protein	unknown	unknown	gnl\|CDD\|133036
NZ_CP047807.1\|WP_000927340.1\|2521841_2523974_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP047807.1\|WP_000047255.1\|2496026_2496710_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|224191
NZ_CP047807.1\|WP_000908180.1\|2528264_2529047_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP047807.1\|WP_000958531.1\|2500716_2501781_+\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|378455
NZ_CP047807.1\|WP_000894032.1\|2509883_2510816_+\|YbbR-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227193
NZ_CP047807.1\|WP_000167871.1\|2507975_2508884_+\|arginase	unknown	unknown	gnl\|CDD\|212515
NZ_CP047807.1\|WP_001237506.1\|2496888_2498232_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP047807.1\|WP_001802298.1\|2531467_2531572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000495681.1\|2532013_2533105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000334463.1\|2526227_2528033_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP047807.1\|WP_000636857.1\|2498330_2498804_+\|multidrug-efflux-transporter-SepA	unknown	unknown	gnl\|CDD\|374975
NZ_CP047807.1\|WP_001792784.1\|2530629_2530788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000083807.1\|2524008_2525547_-\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP047807.1\|WP_001292149.1\|2521395_2521830_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
NZ_CP047807.1\|WP_000370930.1\|2529114_2529972_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000347896.1\|2509072_2509882_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	2.13611e-103
NZ_CP047807.1\|WP_000521495.1\|2510842_2512198_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP047807.1\|WP_001141006.1\|2499126_2500569_+\|multidrug-efflux-MFS-transporter-LmrS	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.08461e-81
NZ_CP047807.1\|WP_000648723.1\|2520289_2521396_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP047807.1\|WP_000884746.1\|2494820_2496008_+\|UDPGP-type-1-family-protein	gnl\|CDD\|133036	cd04193, UDPGlcNAc_PPase, UDPGlcNAc pyrophosphorylase catalayzes the synthesis of UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc) pyrophosphorylase (UAP) (also named GlcNAc1P uridyltransferase), catalyzes the reversible conversion of UTP and GlcNAc1 to PPi and UDPGlcNAc. UDP-N-acetylglucosamine (UDPGlcNAc), the activated form of GlcNAc, is a key precursor of N- and O-linked glycosylations. It is essential for the synthesis of chitin (a major component of the fungal cell wall) and of the glycosylphosphatidylinositol (GPI) linker which anchors a variety of cell surface proteins to the plasma membrane. In bacteria, UDPGlcNAc represents an essential precursor for both peptidoglycan and lipopolysaccharide biosynthesis. Human UAP has two isoforms, resulting from alternative splicing of a single gene and differing by the presence or absence of 17 amino acids. UDPGlcNAc pyrophosphorylase shares significant sequence and structure conservation with UDPglucose pyrophosphorylase.	4.55468e-149
NZ_CP047807.1\|WP_000927340.1\|2521841_2523974_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	5.17174e-68
NZ_CP047807.1\|WP_000047255.1\|2496026_2496710_+\|hemolysin-III-family-protein	gnl\|CDD\|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	2.41003e-66
NZ_CP047807.1\|WP_000908180.1\|2528264_2529047_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	8.27306e-106
NZ_CP047807.1\|WP_000958531.1\|2500716_2501781_+\|P-loop-NTPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	6.43129e-115
NZ_CP047807.1\|WP_000894032.1\|2509883_2510816_+\|YbbR-like-domain-containing-protein	gnl\|CDD\|227193	COG4856, COG4856, Uncharacterized protein conserved in bacteria [Function unknown].	6.26423e-118
NZ_CP047807.1\|WP_000167871.1\|2507975_2508884_+\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	3.36534e-146
NZ_CP047807.1\|WP_001237506.1\|2496888_2498232_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.92638e-43
NZ_CP047807.1\|WP_000334463.1\|2526227_2528033_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP047807.1\|WP_000636857.1\|2498330_2498804_+\|multidrug-efflux-transporter-SepA	gnl\|CDD\|374975	pfam17080, SepA, Multidrug Resistance efflux pump. SepA is a drug efflux protein that is involved in bacterial multidrug resistance. It is predicted to have four transmembrane domains.	3.20059e-30
NZ_CP047807.1\|WP_000083807.1\|2524008_2525547_-\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP047807.1\|WP_001292149.1\|2521395_2521830_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_CP047807.1\|WP_000370930.1\|2529114_2529972_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.00207e-59

>NZ_CP047807.1|WP_000521495.1|2510842_2512198_+|phosphoglucosamine-mutase
MGKYFGTDGVRGVANQELTPELAFKLGRYGGYVLAHNKGEKHPRVLVGRDTRVSGEMLESALIAGLISIGAEVMRLGIISTPGVAYLTRDMGAELGVMISASHNPVADNGIKFFGSDGFKLSDEQENEIEALLDQENPELPRPVGNDIVHYSDYFEGAQKYLSYLKSTVDVNFEGLKIVLDGANGSTSSLAPFLFGDLEADTETIGCSPDGYNINEKCGSTHPEKLAEKVVETESDFGLAFDGDGDRIIAVDENGQIVDGDQIMFIIGQEMHKNQELNNDMIVSTVMSNLGFYKALEQEGIKSNKTKVGDRYVVEEMRRGNYNLGGEQSGHIVMMDYNTTGDGLLTGIQLASVIKMTGKSLSELAGQMKKYPQSLINVRVTDKYRVEENVDVKEVMTKVEVEMNGEGRILVRPSGTEPLVRVMVEAATDEDAERFAQQIADVVQDKMGLDK
>NZ_CP047807.1|WP_000894032.1|2509883_2510816_+|YbbR-like-domain-containing-protein
MLESKWGLRFIAFLLALFFFLSVNNVFGNIFNTGNLGQKSSKTIQDVPVEILYNTKDLHLTKAPETVNVTISGPQSKIIKIENPEDLRVVIDLSNAKAGKYQEKYQVKGLADDIHYSVKPKLANITLENKVTKKMTVQPDVSQSDIDPLYKITKQEVSPQTVKVTGGEEQLNDIAYLKATFKTNKKINGDTKDVAEVTAFDKKLNKLNVSIQPNEVNLQVKVEPFSKKVKVNVKQKGSLADDKELSSIDLEDKEIEIFGSRDDLQNISEVDAEVDLDGISESTEKTVKINLPEHVTKAQPSETKAYINVK
>NZ_CP047807.1|WP_000347896.1|2509072_2509882_+|TIGR00159-family-protein
MDFSNFFQNLSTLKIVTSILDLLIVWYVLYLLITVFKGTKAIQLLKGILVIVIGQQISMILNLTATSKLFDIVIQWGVLALIVIFQPEIRRALEQLGRGSFLKRYTSNTYSKDEEKLIQSVSKAVQYMAKRRIGALIVFEKETGLQDYIETGIAMDSNISQELLINVFIPNTPLHDGAMIIQGTKIAAAASYLPLSDSPKISKSLGTRHRAAVGISEVSDAFTVIVSEETGDISVTFDGKLRRDISNEIFEELLAEHWFGTRFQKKGVK
>NZ_CP047807.1|WP_000167871.1|2507975_2508884_+|arginase
MTKTKAIDIIGAPSTFGQRKLGVDLGPTAIRYAGLISRLKQLDLDVYDKGDIKVPAVNIEKFHSEQKGLRNYDEIIEVNQKLNKEVSASIENNRFPLVLGGDHSIAVGSVSAISKHYNNLGVIWYDAHGDLNIPEESPSGNIHGMPLRILTGEGPKELLELNSNVIKPENIVLIGMRDLDKGERQFIKDHNIKTFTMSDIDKLGIKEVIENTIEYLKSRNVDGVHLSLDVDALDPLETPGTGTRVLGGLSYRESHFALELLHQSHLISSMDLVEVNPLIDSNNHTAEQAVSLVGTFFGETLL
>NZ_CP047807.1|WP_000958531.1|2500716_2501781_+|P-loop-NTPase
MLTVDQVKELVGEIKDPIIDVPLKETEGIVEVSIKEEKEHVSVKLAMAQLGGAPQLDLQMAVVNALKENGAKTVGIRFETLPEEKVNQFKPKEENKPKTIEGLLSQNNPVEFIAIASGKGGVGKSTVAVNLAVALAREGKKVGLVDADIYGFSVPDMMGIDEKPGIKGKEVIPVERHGVKVISMAFFVEENAPVIWRGPMLGKMLTNFFTEVKWGDIEYLILDLPPGTGDVALDVHTMLPSSKEIIVTTPHPTAAFVAARAGAMAKHTDHSILGVIENMSYFESKETGNKEYVFGKGGGTKLADELNTQLLGELPLEQPSWNPKDFAPSIYQSDDRLGKIYSSIAQKVIAATNK
>NZ_CP047807.1|WP_001141006.1|2499126_2500569_+|multidrug-efflux-MFS-transporter-LmrS
MAKVELTTRRRNFIVAVMLISAFVAILNQTLLNTALPSIMRELNINESTSQWLVTGFMLVNGVMIPLTAYLMDRIKTRPLYLAAMGTFLLGSIVAALAPNFGVLMLARVIQAMGAGVLMPLMQFTLFTLFSKEHRGFAMGLAGLVIQFAPAIGPTVTGLIIDQASWRVPFIIIVGIALVAFVFGLVSISSYNEVKYTKLDKRSVMYSTIGFGLMLYAFSSAGDLGFTSPIVIGALIISMVIIYLFIRRQFNITNALLNLRVFKNRTFALCTISSMIIMMSMVGPALLIPLYVQNSLSLSALLSGLVIMPGAIINGIMSVFTGKFYDKYGPRPLIYTGFTILTITTIMLCFLHTDTSYTYLIVVYAIRMFSVSLLMMPINTTGINSLRNEEISHGTAIMNFGRVMAGSLGTALMVTLMSFGAKIFLSTSPSHLTATEIKQQSIAIGVDISFAFVAVLVMAAYVIALFIREPKEIESNRRKF
>NZ_CP047807.1|WP_000636857.1|2498330_2498804_+|multidrug-efflux-transporter-SepA
MIVNYLKHKFYNLLTTMIVLFIFVLSGAIFLTFLGFGLYGLSRILIYFRLGDFTYNRSMYDNLLYYGSYIIFGYFIIFAVEHLMDYFRKMLPENAYFRGATFHLISYTVATTLFYFIIHLNYVYINIDFWVIMVIIGFLYVCKLQFYPESKNLNNRK
>NZ_CP047807.1|WP_001237506.1|2496888_2498232_+|MFS-transporter
MRLKSIITVIALILIMFMSAIESSIISLALPTIKQDLNAGNLISLIFTAYFIALVIANPIVGELLSRFKIIYVAIAGLLLFSIGSFMCGLSTNFTMLIISRVIQGFGSGVLMSLSQIVPKLAFEIPLRYKIMGIVGSVWGISSIIGPLLGGGILEFATWHWLFYINIPIAIIAIILVIWTFHFPEEETVAKSKFDTKGLTLFYVFIGLIMFALLNQQLLLLNFLSFILAIVVAMCLFKVEKHVSSPFLPVVEFNRSITLVFITDLLTAICLMGFNLYIPVYLQEQLGLSPLQSGLVIFPLSVAWITLNFNLHRIEAKLSRKVIYLLSFTLLLVSSIIISFGIKLPVLIAFVLILAGLSFGYIYTKDSVIVQEETSPLQMKKMMSFYGLTKNLGASIGSTIMGYLYAIQSGIFGPNLHNVLSAVAVISIGLIVLWVVFFKEQSSQSKE
>NZ_CP047807.1|WP_000047255.1|2496026_2496710_+|hemolysin-III-family-protein
MSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTLASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVGGWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFILFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
>NZ_CP047807.1|WP_000884746.1|2494820_2496008_+|UDPGP-type-1-family-protein
MLDKNQLAKYKQDHLCEYEKLMSNNEKEALEEKVASLDLDFIAKLYNDLYINKKTIDDVSAVSEVKYDIKSQMSDDEIKRLEEQGLQAIKEGQFAVLLMAGGQGTRLGYKGPKGSFEIEGVSLFELQANQLKTLNHQSGHTIQWYIMTSDINHEETLAYFEAHSYFGYDQEAIHFFKQDNIVALSEEGKLILNQQGRIMETPNGNGGVFKSLDKTGYLEEMSNNGVKYIFLNNIDNVLVKVLDPLFAGFTVEHDYDITSKTIQPKPGESVGRLVNVDCKDTVLEYSELDPEVANQFNNANIGIHAFKLGFILNAVNRELPYHLAIKNLKQLDENFGVIEQPTLKFELFYFDIFTYGTSFVTLQVPREEEFSPLKNKEGKDSVATATEDLRRMGLI
>NZ_CP047807.1|WP_000648723.1|2520289_2521396_-|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFAGKATVLDAVKDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS
>NZ_CP047807.1|WP_001292149.1|2521395_2521830_-|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_CP047807.1|WP_000927340.1|2521841_2523974_-|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGADSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_CP047807.1|WP_000083807.1|2524008_2525547_-|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_CP047807.1|WP_000334463.1|2526227_2528033_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDGTPVVALATQENVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_CP047807.1|WP_000908180.1|2528264_2529047_+|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDEEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPMLAMIYVTHFIEEITSNFTKILLLKDGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_CP047807.1|WP_000370930.1|2529114_2529972_+|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITTFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIEHFGIHQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
>NZ_CP047807.1|WP_001792784.1|2530629_2530788_-|hypothetical-protein
MSKSSDALFNSLTQSFELIEGVYNELVTDNLKIVMYKPRKESTSGRINRRFK
>NZ_CP047807.1|WP_001802298.1|2531467_2531572_+|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_CP047807.1|WP_000495681.1|2532013_2533105_-|hypothetical-protein
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYVQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKETTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK

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Crispr_ID: NZ_CP047807_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047807_7

2531907-2531997

Orphan

Consensus_repeat	Method
AAGAAGCCCCTAACAACTAAAGTTG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP047807_7

>merge|NZ_CP047807|7|2531907-2531997|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTGAAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCATAAGAGCCCCTAACAACTAAAGTTG

>NZ_CP047807|7|6|2531907-2531997|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTG	AAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCA
TAAGAGCCCCTAACAACTAAAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047807.1\|WP_000003759.1\|2534352_2534673_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP047807.1\|WP_001127960.1\|2535925_2536864_+\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
NZ_CP047807.1\|WP_000334463.1\|2526227_2528033_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP047807.1\|WP_000648723.1\|2520289_2521396_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP047807.1\|WP_000495681.1\|2532013_2533105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000927340.1\|2521841_2523974_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP047807.1\|WP_000908180.1\|2528264_2529047_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP047807.1\|WP_001802298.1\|2531467_2531572_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_000123402.1\|2537795_2539169_+\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_CP047807.1\|WP_000070866.1\|2540238_2540682_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP047807.1\|WP_000808817.1\|2536894_2537125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047807.1\|WP_047928587.1\|2512474_2519971_+\|DUF1542-domain-containing-protein	unknown	unknown	gnl\|CDD\|275089
NZ_CP047807.1\|WP_000019743.1\|2533370_2534351_-\|CDF-family-zinc-efflux-transporter-CzrB	unknown	unknown	gnl\|CDD\|224151
NZ_CP047807.1\|WP_000160304.1\|2540802_2541513_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP047807.1\|WP_001024095.1\|2534824_2535490_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_CP047807.1\|WP_001123303.1\|2539625_2540039_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NZ_CP047807.1\|WP_000370930.1\|2529114_2529972_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP047807.1\|WP_000083807.1\|2524008_2525547_-\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP047807.1\|WP_001292149.1\|2521395_2521830_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
NZ_CP047807.1\|WP_001792784.1\|2530629_2530788_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047807.1\|WP_000003759.1\|2534352_2534673_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
NZ_CP047807.1\|WP_001127960.1\|2535925_2536864_+\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	7.24075e-129
NZ_CP047807.1\|WP_000648723.1\|2520289_2521396_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP047807.1\|WP_001024095.1\|2534824_2535490_+\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.27122e-47
NZ_CP047807.1\|WP_000927340.1\|2521841_2523974_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	5.17174e-68
NZ_CP047807.1\|WP_000908180.1\|2528264_2529047_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	8.27306e-106
NZ_CP047807.1\|WP_000334463.1\|2526227_2528033_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP047807.1\|WP_000123402.1\|2537795_2539169_+\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.86989e-06
NZ_CP047807.1\|WP_000070866.1\|2540238_2540682_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
NZ_CP047807.1\|WP_047928587.1\|2512474_2519971_+\|DUF1542-domain-containing-protein	gnl\|CDD\|275089	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain. This domain, about 375 amino acids long on average, occurs only in Staphylococcus and Streptococcus. It occurs as a non-repetitive N-terminal domain of LPXTG-anchored surface proteins, including SasC, Mrp, and FmtB. This region in SasC was shown to be involved in cell aggregation and biofilm formation, which may explain the methicillin resistance seen for Mrp and FmtB.	4.61583e-109
NZ_CP047807.1\|WP_000019743.1\|2533370_2534351_-\|CDF-family-zinc-efflux-transporter-CzrB	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.20197e-108
NZ_CP047807.1\|WP_000160304.1\|2540802_2541513_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
NZ_CP047807.1\|WP_001123303.1\|2539625_2540039_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	3.14887e-46
NZ_CP047807.1\|WP_000083807.1\|2524008_2525547_-\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP047807.1\|WP_001292149.1\|2521395_2521830_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_CP047807.1\|WP_000370930.1\|2529114_2529972_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.00207e-59

>NZ_CP047807.1|WP_001802298.1|2531467_2531572_+|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_CP047807.1|WP_001792784.1|2530629_2530788_-|hypothetical-protein
MSKSSDALFNSLTQSFELIEGVYNELVTDNLKIVMYKPRKESTSGRINRRFK
>NZ_CP047807.1|WP_000370930.1|2529114_2529972_+|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITTFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIEHFGIHQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
>NZ_CP047807.1|WP_000908180.1|2528264_2529047_+|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDEEVRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPMLAMIYVTHFIEEITSNFTKILLLKDGESVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_CP047807.1|WP_000334463.1|2526227_2528033_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEDGTPVVALATQENVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_CP047807.1|WP_000083807.1|2524008_2525547_-|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_CP047807.1|WP_000927340.1|2521841_2523974_-|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGADSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_CP047807.1|WP_001292149.1|2521395_2521830_-|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_CP047807.1|WP_000648723.1|2520289_2521396_-|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFAGKATVLDAVKDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS
>NZ_CP047807.1|WP_047928587.1|2512474_2519971_+|DUF1542-domain-containing-protein
MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPAAQPAAPANQGQPAAQPAAQPANQGGQANPAGGAAQPAGQGNQADPNNAAQAQPGNQAAPANQAGQGNNQATPNNNATPANQTQPANAPAAVQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGISKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLKNMTVNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNAQPEVTLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADTILNEDANHVETANRASQADIDGLVTKLQAALIDNQAAIAELDTKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTSQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNEVKQAATARKAQNATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQEVADTKSKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKEAAYTELDAKKQEARTNLDAANTNSDVTTAKDNGIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNAAANADVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAIDANNGSTTEEKEAAKQQVQTEKTAADAAIDAAHSNAEVEAAKNAEIAKIEAIQPATTTKDNAKEAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGETSIDQVTPTVNKKATARNEITTILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDESKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATTEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYLDILNAQTTNDVTQIKDQAVTDIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKENAIQAIDPIQASTDVKTNARAELLTEMQNKITEILSDNTTTNEEKGKDIEPVRATYEEGLNNINTANTTGDVTTAKDTAVQKVQQLHANPVKKPAGKTALDQAAADRKTQIEQTPNASQQEINDAKQEVDAALNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIADAYNAKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKETATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKANQAIEVKAEDTKESIDQSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADADASAKEIARTDLGRYFDRFADKLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTNNGIDNNDATANSNANATPENTGQPNVSETTDNGKADASPTTPNNSDAATGETTATSATDDANDKPQANNNSSVDASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAESTTNNNSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQSTNGKVAQPKSENKAKAEKDGRDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEESTTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKDKMTSTNVSQKDDTATADTNDTQTSVGPVANNKAKDMQTNDTQKSVGSAANNKATQNDGANASPATVSNGSNSANQDMLNVTKPEENKANAKSAQQGKVNKAKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE
>NZ_CP047807.1|WP_000495681.1|2532013_2533105_-|hypothetical-protein
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYVQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKETTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>NZ_CP047807.1|WP_000019743.1|2533370_2534351_-|CDF-family-zinc-efflux-transporter-CzrB
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHAH
>NZ_CP047807.1|WP_000003759.1|2534352_2534673_-|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>NZ_CP047807.1|WP_001024095.1|2534824_2535490_+|SDR-family-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
>NZ_CP047807.1|WP_001127960.1|2535925_2536864_+|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>NZ_CP047807.1|WP_000808817.1|2536894_2537125_+|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>NZ_CP047807.1|WP_000123402.1|2537795_2539169_+|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRMSNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>NZ_CP047807.1|WP_001123303.1|2539625_2540039_+|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>NZ_CP047807.1|WP_000070866.1|2540238_2540682_+|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>NZ_CP047807.1|WP_000160304.1|2540802_2541513_-|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	77872-77899	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	88565-88592	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	570102-570129	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	961633-961660	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	1161143-1161170	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	1168352-1168379	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	777043-777070	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	860851-860878	1	0.964
NZ_CP047807_1	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	NZ_CP047807.1	1607719-1607746	1	0.964
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	864888-864916	1	0.966
NZ_CP047807_2	2.2\|864831\|30\|NZ_CP047807\|CRISPRCasFinder	864831-864860	30	NZ_CP047807.1	864944-864973	1	0.967
NZ_CP047807_4	4.1\|1808355\|33\|NZ_CP047807\|CRISPRCasFinder	1808355-1808387	33	NZ_CP047807.1	2222064-2222096	1	0.97
NZ_CP047807_4	4.1\|1808355\|33\|NZ_CP047807\|CRISPRCasFinder	1808355-1808387	33	NZ_CP047807.1	570131-570163	1	0.97
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	88552-88580	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	860750-860778	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	860863-860891	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	961620-961648	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	1161130-1161158	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	1607731-1607759	2	0.931
NZ_CP047807_2	2.1\|864775\|29\|NZ_CP047807\|CRISPRCasFinder	864775-864803	29	NZ_CP047807.1	1976387-1976415	2	0.931

1. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 77872-77899, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

2. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 88565-88592, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

3. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 570102-570129, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

4. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 961633-961660, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

5. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 1161143-1161170, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

6. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 1168352-1168379, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacgataatgtgcaagttgggg	Protospacer
********* ******************

7. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 777043-777070, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

8. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 860851-860878, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

9. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to position: 1607719-1607746, mismatch: 1, identity: 0.964

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacaataatgtgcaagttgggg	Protospacer
********* ******************

10. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 864888-864916, mismatch: 1, identity: 0.966

catttttgtaagctgacttttcgccagct	CRISPR spacer
catttttgtatgctgacttttcgccagct	Protospacer
********** ******************

11. spacer 2.2|864831|30|NZ_CP047807|CRISPRCasFinder matches to position: 864944-864973, mismatch: 1, identity: 0.967

attgtttgttggaattggtgatcctatttc	CRISPR spacer
attgtctgttggaattggtgatcctatttc	Protospacer
*****.************************

12. spacer 4.1|1808355|33|NZ_CP047807|CRISPRCasFinder matches to position: 2222064-2222096, mismatch: 1, identity: 0.97

attgggaatccaattcctctttgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
***************.*****************

13. spacer 4.1|1808355|33|NZ_CP047807|CRISPRCasFinder matches to position: 570131-570163, mismatch: 1, identity: 0.97

attgggaatccaattcctctttgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttggggccca	Protospacer
***************.*****************

14. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 88552-88580, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

15. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 860750-860778, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgactttccgccagct	Protospacer
**** ***************.********

16. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 860863-860891, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

17. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 961620-961648, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

18. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 1161130-1161158, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

19. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 1607731-1607759, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgacttttcgtcagct	Protospacer
**** ******************.*****

20. spacer 2.1|864775|29|NZ_CP047807|CRISPRCasFinder matches to position: 1976387-1976415, mismatch: 2, identity: 0.931

catttttgtaagctgacttttcgccagct	CRISPR spacer
cattattgtaagctgactttccgccagct	Protospacer
**** ***************.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047807_2	2.2\|864831\|30\|NZ_CP047807\|CRISPRCasFinder	864831-864860	30	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	268766-268795	6	0.8
NZ_CP047807_2	2.2\|864831\|30\|NZ_CP047807\|CRISPRCasFinder	864831-864860	30	MN856116	Myoviridae sp. isolate 525, complete genome	4992-5021	7	0.767
NZ_CP047807_6	6.1\|2519608\|34\|NZ_CP047807\|CRISPRCasFinder	2519608-2519641	34	JN882286	Cronobacter phage vB_CsaP_GAP52, complete genome	23034-23067	8	0.765
NZ_CP047807_6	6.1\|2519608\|34\|NZ_CP047807\|CRISPRCasFinder	2519608-2519641	34	CP030544	Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence	7567-7600	8	0.765

1. spacer 2.2|864831|30|NZ_CP047807|CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 6, identity: 0.8

-attgtttgttggaattggtgatcctatttc	CRISPR spacer
tactg-ttgttggaattggtggtccaattaa	Protospacer
 *.** ***************.*** ***

2. spacer 2.2|864831|30|NZ_CP047807|CRISPRCasFinder matches to MN856116 (Myoviridae sp. isolate 525, complete genome) position: , mismatch: 7, identity: 0.767

attgt-ttgttggaattggtgatcctatttc	CRISPR spacer
-tggcattgttggaattggttttcctattgt	Protospacer
 * *. **************  ******* .

3. spacer 6.1|2519608|34|NZ_CP047807|CRISPRCasFinder matches to JN882286 (Cronobacter phage vB_CsaP_GAP52, complete genome) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
agcatataaaagctataaagctaaagatatgcaa	Protospacer
  **  *. **.* ********************

4. spacer 6.1|2519608|34|NZ_CP047807|CRISPRCasFinder matches to CP030544 (Staphylococcus aureus strain ER04166.3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.765

cccagttgcaaacaataaagctaaagatatgcaa	CRISPR spacer
tactgtttataacaataaagctaaagttattcaa	Protospacer
. * ***   **************** *** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 45553

Staphylococcus_phage(93.55%)

head,protease,holin,portal,terminase,integrase,tail,capsid

attL 39689:39705|attR 47123:47139

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625088.1\|0_1662_+\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	100.0
WP_000025274.1\|1677_2865_+\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	1.0e-219	100.0
WP_000642728.1\|2848_3586_+\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	1.8e-129	100.0
WP_000154555.1\|3609_4755_+\|capsid	phage major capsid protein	A0A1X9H072	Staphylococcus_phage	5.6e-215	100.0
WP_000238236.1\|4774_5059_+	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
WP_000150936.1\|5048_5333_+\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000755150.1\|5316_5679_+\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000114225.1\|5675_6080_+	hypothetical protein	A0A2I6PDJ6	Staphylococcus_phage	4.3e-69	100.0
WP_000565498.1\|6076_6484_+	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000268741.1\|6484_7129_+\|tail	phage tail protein	W5R9H4	Staphylococcus_phage	6.5e-120	100.0
WP_072050172.1\|7170_7395_+	hypothetical protein	A0A075LYE8	Staphylococcus_phage	8.8e-32	98.6
WP_001096355.1\|7444_7795_+	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_047928553.1\|8039_12569_+\|tail	phage tail tape measure protein	A0A1X9H084	Staphylococcus_phage	0.0e+00	99.9
WP_000567408.1\|12565_14050_+\|tail	phage tail protein	A0A2I6PDJ0	Staphylococcus_phage	1.2e-297	100.0
WP_000582177.1\|14065_17848_+	hypothetical protein	A0A068A201	Staphylococcus_phage	0.0e+00	99.8
WP_001000058.1\|17840_17993_+	hypothetical protein	A0A1W6JPL6	Staphylococcus_phage	7.6e-19	100.0
WP_001262620.1\|18038_18326_+	hypothetical protein	C5I682	Staphylococcus_phage	9.9e-44	100.0
WP_000340977.1\|18381_18756_+	hypothetical protein	G4KNR3	Staphylococcus_phage	3.3e-39	100.0
WP_072357969.1\|18898_19075_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	6.5e-22	96.6
WP_031762631.1\|19127_19235_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|19286_19541_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|19552_20308_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000920041.1\|20498_20990_+	staphylokinase	A7TWR8	Staphylococcus_phage	8.0e-86	100.0
WP_160179323.1\|22067_22517_-	chemotaxis-inhibiting protein CHIPS	A7TWR9	Staphylococcus_phage	9.6e-78	99.3
WP_000702262.1\|23199_23550_+	complement inhibitor SCIN-A	A7TWS0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|23602_23863_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000669789.1\|24173_24353_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
WP_160179325.1\|25310_27359_+	MAP domain-containing protein	NA	NA	NA	NA
WP_001068542.1\|27682_28969_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000990056.1\|29168_29267_+	hypothetical protein	NA	NA	NA	NA
WP_000681968.1\|29509_29686_+	hypothetical protein	NA	NA	NA	NA
WP_000691584.1\|29944_30325_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000991302.1\|30321_31218_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000645728.1\|31218_31899_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000763048.1\|31895_32768_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_047928552.1\|32767_33508_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
WP_000182842.1\|33573_34137_-	thioredoxin family protein	NA	NA	NA	NA
WP_000966288.1\|34257_34782_+	membrane protein	NA	NA	NA	NA
WP_001033971.1\|34841_35399_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_000713072.1\|35395_36238_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_001188077.1\|36294_37335_-	linear amide C-N hydrolase	NA	NA	NA	NA
WP_000267034.1\|37785_37959_+	hypothetical protein	NA	NA	NA	NA
WP_106905733.1\|38981_40133_+\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	8.1e-12	32.2
39689:39705	attL	NA	NA	NA	NA
WP_106905822.1\|40171_42199_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_106905732.1\|42557_43946_+	hypothetical protein	NA	NA	NA	NA
WP_106905731.1\|43988_44408_-	YolD-like family protein	U3PG23	Staphylococcus_phage	1.5e-27	50.4
WP_020977410.1\|44707_45553_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	1.3e-30	33.9
47123:47139	attR	NA	NA	NA	NA

DBSCAN-SWA_2

52172 : 54202

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000149686.1\|52172_52733_-	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_000275707.1\|53104_54202_+	pectate lyase	U5PWM6	Bacillus_phage	2.5e-47	34.9

DBSCAN-SWA_3

58231 : 60515

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284433.1\|58231_59701_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	3.5e-108	45.1
WP_000040866.1\|59693_60515_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.3e-69	52.7

DBSCAN-SWA_4

64176 : 70943

Gordonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000572878.1\|64176_65472_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9
WP_001165363.1\|65580_65883_+	hypothetical protein	NA	NA	NA	NA
WP_000272071.1\|66054_66747_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_000992921.1\|66743_68936_+	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
WP_000774565.1\|68939_70943_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	5.8e-114	36.1

DBSCAN-SWA_5

78002 : 83031

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001231451.1\|78002_78950_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.2e-16	27.8
WP_001147869.1\|79030_80392_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.1e-103	43.8
WP_000548775.1\|80561_81092_+	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_000140172.1\|81338_82409_+	DNA polymerase IV	NA	NA	NA	NA
WP_000613738.1\|82476_83031_-	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	1.2e-29	35.7

DBSCAN-SWA_6

86483 : 86897

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001670387.1\|86483_86897_+	hypothetical protein	A0A1Q1PVU5	Staphylococcus_phage	5.1e-17	39.1

DBSCAN-SWA_7

91890 : 92520

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153535.1\|91890_92520_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-06	30.8

DBSCAN-SWA_8

108000 : 109737

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000597239.1\|108000_109737_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4

DBSCAN-SWA_9

125880 : 126609

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144055.1\|125880_126609_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7

DBSCAN-SWA_10

137493 : 137838

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290301.1\|137493_137838_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7

DBSCAN-SWA_11

147427 : 148168

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216874.1\|147427_148168_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-24	29.8

DBSCAN-SWA_12

155954 : 160218

Staphylococcus_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129409671.1\|155954_156737_+	staphylococcal enterotoxin type O	A0A1X9H080	Staphylococcus_phage	1.4e-31	36.7
WP_000821658.1\|157017_157737_+	staphylococcal enterotoxin type M	A0A1X9H080	Staphylococcus_phage	2.3e-25	35.8
WP_000713847.1\|157771_158500_+	staphylococcal enterotoxin type I	A0A1X9H080	Staphylococcus_phage	1.1e-27	39.2
WP_160179339.1\|158653_159424_+	staphylococcal enterotoxin type C1/U	A0A097PAT7	Streptococcus_pyogenes_phage	3.1e-44	42.8
WP_001236364.1\|159462_160218_+	staphylococcal enterotoxin type N	A0A075M4C7	Staphylococcus_phage	1.0e-39	41.0

DBSCAN-SWA_13

163961 : 165056

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001792814.1\|163961_164090_-\|transposase	IS3 family transposase	A0A2H4PQU1	Staphylococcus_phage	6.6e-08	66.7
WP_000209099.1\|164267_165056_-	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	1.3e-138	95.0

DBSCAN-SWA_14

168408 : 172200

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001092773.1\|168408_168990_-	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	4.6e-56	63.2
WP_047928525.1\|169385_170942_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	6.3e-286	97.7
WP_000072555.1\|170934_172200_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	5.2e-44	34.3

DBSCAN-SWA_15

177276 : 224380

Staphylococcus_phage(91.89%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000764922.1\|177276_178029_-	hypothetical protein	A0A097PAT7	Streptococcus_pyogenes_phage	4.4e-51	47.2
WP_031775015.1\|178055_178781_-	enterotoxin	A0EX09	Staphylococcus_phage	4.0e-25	33.5
WP_000669028.1\|178825_179452_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	3.9e-93	93.8
WP_160179343.1\|179525_180521_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	4.2e-73	97.2
WP_078104171.1\|180601_181252_-	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	1.6e-41	83.8
WP_076692541.1\|181554_182010_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	1.2e-78	98.6
WP_000348379.1\|182168_183647_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.5e-289	100.0
WP_000778516.1\|183651_184653_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	9.7e-187	98.2
WP_000718110.1\|184649_184907_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	3.6e-45	98.8
WP_078098768.1\|184972_185446_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	1.4e-82	97.5
WP_016169057.1\|185450_186197_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.2e-143	99.2
WP_000109906.1\|186574_188167_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
WP_000933822.1\|188538_189732_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
WP_000366163.1\|189856_190765_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
WP_000453298.1\|190976_191810_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	7.8e-158	99.3
WP_000623478.1\|192193_192547_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	2.6e-22	100.0
WP_001200542.1\|192543_192909_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
WP_000091445.1\|193164_193467_-	hypothetical protein	NA	NA	NA	NA
WP_001096494.1\|193726_194440_+	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_001168907.1\|194879_195515_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001030469.1\|195810_196254_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-57	98.6
WP_001153742.1\|196240_196684_-	competence protein ComK	NA	NA	NA	NA
WP_000671052.1\|196796_197267_-	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
WP_000384171.1\|197465_197690_+	hypothetical protein	NA	NA	NA	NA
WP_001032833.1\|197965_198820_+	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000163235.1\|199115_199511_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	6.3e-73	100.0
WP_000989121.1\|199528_200821_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
WP_000221177.1\|200820_201135_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	9.8e-53	98.1
WP_160179345.1\|201657_203160_+	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.3e-30	100.0
WP_025174259.1\|203652_204684_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.0e-195	98.8
WP_000493888.1\|204690_205323_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.4e-113	100.0
WP_001159035.1\|205333_206515_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	1.7e-227	100.0
WP_001008549.1\|206527_206992_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	4.5e-70	100.0
WP_160179347.1\|207113_208115_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7
WP_001790712.1\|208226_208346_+	hypothetical protein	NA	NA	NA	NA
WP_000266096.1\|208348_209176_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_000757543.1\|209745_210147_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000764419.1\|210266_210830_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
WP_000526539.1\|210826_211780_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
WP_001025061.1\|211889_213071_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.6e-218	100.0
WP_001108728.1\|213361_215776_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.3
WP_000836465.1\|215797_216109_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	1.6e-52	100.0
WP_047928507.1\|216434_222995_+	LPXTG-anchored repetitive surface protein SasC	A0A2H4PQU6	Staphylococcus_phage	2.1e-298	96.2
WP_000285020.1\|223111_224380_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	9.1e-57	99.1

DBSCAN-SWA_16

235813 : 241141

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001091387.1\|235813_236671_+	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	6.8e-72	100.0
WP_001048368.1\|236699_237296_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_031775255.1\|237316_241141_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.0e-83	47.0

DBSCAN-SWA_17

248051 : 251753

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928504.1\|248051_249221_-	acetoin utilization protein AcuC	A0A2K9L0I3	Tupanvirus	7.4e-21	37.0
WP_001015996.1\|249245_249878_-	hypothetical protein	NA	NA	NA	NA
WP_000862083.1\|250046_251753_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.2e-274	100.0

DBSCAN-SWA_18

258370 : 261001

Cronobacter_phage(50.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186029.1\|258370_259633_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.7e-85	42.1
WP_001279338.1\|259726_261001_-\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	1.7e-10	29.0

DBSCAN-SWA_19

264770 : 268905

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808837.1\|264770_266375_-	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.2e-114	100.0
WP_000291419.1\|266361_267522_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_000553927.1\|267635_268082_-	OsmC family protein	NA	NA	NA	NA
WP_000174285.1\|268161_268905_+	glycerophosphoryl diester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	4.9e-18	30.0

DBSCAN-SWA_20

286722 : 289920

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031586435.1\|286722_289920_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.3e-136	30.7

DBSCAN-SWA_21

294853 : 296611

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179354.1\|294853_296611_+	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	1.3e-40	98.9

DBSCAN-SWA_22

303472 : 311636

Feldmannia_irregularis_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000080028.1\|303472_304177_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.6e-07	28.7
WP_160179534.1\|304176_305838_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	5.8e-35	39.4
WP_000849439.1\|306336_307824_+	hypothetical protein	NA	NA	NA	NA
WP_001038305.1\|308117_310748_+	DNA polymerase I	A8E2B3	Enterococcus_phage	6.1e-47	33.0
WP_160179356.1\|310763_311636_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	9.7e-42	37.9

DBSCAN-SWA_23

315551 : 326704

Brevibacillus_phage(20.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808621.1\|315551_316472_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	8.1e-31	29.4
WP_001790562.1\|316564_316687_+	hypothetical protein	NA	NA	NA	NA
WP_000435132.1\|316884_318822_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	7.8e-116	36.0
WP_000049154.1\|319247_320741_+	amino acid permease	NA	NA	NA	NA
WP_001791162.1\|320969_321497_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.1e-11	33.1
WP_001125540.1\|321525_321726_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_001138360.1\|321772_322129_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_000032657.1\|322270_322879_+	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	6.6e-21	35.9
WP_001280024.1\|322897_323827_+	hypothetical protein	NA	NA	NA	NA
WP_001790560.1\|323831_323942_+	hypothetical protein	NA	NA	NA	NA
WP_000127573.1\|323989_325291_+	trigger factor	NA	NA	NA	NA
WP_000472302.1\|325441_326704_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.0e-140	62.0

DBSCAN-SWA_24

336271 : 338902

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000425353.1\|336271_338902_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.7

DBSCAN-SWA_25

348835 : 384388

uncultured_Mediterranean_phage(18.75%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001005767.1\|348835_349840_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001019178.1\|349841_350867_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001112045.1\|350889_352029_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
WP_001160682.1\|352047_352308_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_000749795.1\|352582_354862_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_000594985.1\|355064_357338_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.1e-63	29.1
WP_000364542.1\|357359_357878_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
WP_001058587.1\|358305_360495_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
WP_000869983.1\|360506_360959_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_000717800.1\|360955_361831_+	cell wall amidase	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
WP_061743889.1\|362291_363554_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000044799.1\|363569_365336_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.3e-16	27.3
WP_001808039.1\|365668_365797_+	hypothetical protein	NA	NA	NA	NA
WP_000682646.1\|365796_366570_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_160179360.1\|366730_368005_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	4.1e-105	50.5
WP_000704122.1\|368089_368512_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000752909.1\|368611_368794_+	CsbD family protein	NA	NA	NA	NA
WP_000009238.1\|368833_368980_+	hypothetical protein	NA	NA	NA	NA
WP_000985895.1\|369216_370230_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_000409167.1\|370541_371684_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.3e-33	29.3
WP_000066097.1\|371684_372803_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000567018.1\|373437_374106_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_047928487.1\|374107_376585_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.1e-66	28.4
WP_047928486.1\|376927_379558_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.2e-64	34.4
WP_000426912.1\|379620_379881_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_000939059.1\|379884_380313_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_000134779.1\|380327_380636_+	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_000342266.1\|380920_381559_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
WP_000137779.1\|381561_382485_+	U32 family peptidase	NA	NA	NA	NA
WP_000848304.1\|382496_383765_+	U32 family peptidase	Q6DW11	Phage_TP	4.0e-36	31.7
WP_000648617.1\|383764_384388_+	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1

DBSCAN-SWA_26

399237 : 405401

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000439693.1\|399237_399699_+	ComE operon protein 2	A7KUY9	Bacillus_phage	3.6e-35	58.8
WP_000953299.1\|399757_401905_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.6e-32	32.2
WP_001282563.1\|401961_402936_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_001274017.1\|402980_403232_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_000368345.1\|403577_405401_+	elongation factor 4	A0A1S5SF82	Streptococcus_phage	8.0e-22	25.1

DBSCAN-SWA_27

408891 : 411999

Micromonas_pusilla_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000034716.1\|408891_410724_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	4.4e-137	46.5
WP_047928473.1\|410859_411999_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.2e-26	25.8

DBSCAN-SWA_28

418469 : 419417

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001117767.1\|418469_419417_+	PhoH family protein	L7TP00	Rhizobium_phage	6.4e-47	46.8

DBSCAN-SWA_29

422470 : 436216

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030080.1\|422470_423862_-\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	4.7e-46	27.4
WP_001797828.1\|424196_424820_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000411301.1\|424830_425649_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_001217244.1\|425709_427527_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.6e-54	36.0
WP_001283055.1\|427750_428857_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_023914705.1\|428987_429665_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_000683936.1\|429667_430768_+	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	5.2e-08	29.6
WP_001062177.1\|430881_432228_+	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	2.4e-55	34.0
WP_000924220.1\|432237_433128_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	3.4e-26	36.0
WP_031775221.1\|433253_434039_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.0e-18	28.3
WP_000564316.1\|434080_434944_+	metal ABC transporter permease	NA	NA	NA	NA
WP_001095260.1\|434930_435341_+	transcriptional repressor	NA	NA	NA	NA
WP_000863556.1\|435616_436216_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	9.2e-60	54.7

DBSCAN-SWA_30

442389 : 443013

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223008.1\|442389_443013_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-30	37.1

DBSCAN-SWA_31

448557 : 451369

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019690.1\|448557_449904_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	5.7e-65	39.9
WP_000202188.1\|449896_451369_+	glycine dehydrogenase subunit 2	E3SN07	Prochlorococcus_phage	2.8e-81	41.3

DBSCAN-SWA_32

458868 : 465439

Indivirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001286928.1\|458868_460206_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.6e-43	37.7
WP_000159865.1\|460198_460429_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000183375.1\|460406_461288_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	8.9e-11	26.1
WP_001124985.1\|461719_462172_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000942210.1\|462187_463867_+	DNA repair protein RecN	NA	NA	NA	NA
WP_047928467.1\|464017_465439_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	3.9e-40	26.3

DBSCAN-SWA_33

472268 : 473675

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000193707.1\|472268_473675_+	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	4.3e-31	31.1

DBSCAN-SWA_34

480102 : 481587

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000105070.1\|480102_481587_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	2.4e-80	37.8

DBSCAN-SWA_35

485114 : 493399

Klosneuvirus(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001171351.1\|485114_486023_-	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	3.4e-05	31.5
WP_000365246.1\|486104_486647_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000392691.1\|486751_487201_+	transcriptional repressor	NA	NA	NA	NA
WP_000447733.1\|487249_488137_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.6e-37	31.1
WP_001183436.1\|488214_488721_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_000273371.1\|488812_489544_+	segregation and condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	7.9e-05	21.8
WP_000368656.1\|489536_490079_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_000159577.1\|490071_490809_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000064078.1\|490941_491667_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-45	43.0
WP_000987774.1\|491647_493399_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	2.2e-21	33.2

DBSCAN-SWA_36

497030 : 499709

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001151997.1\|497030_497279_-	ferredoxin	A0A127AYY7	Bacillus_phage	8.3e-15	48.0
WP_001163801.1\|497386_498340_+	hypothetical protein	NA	NA	NA	NA
WP_000902099.1\|498329_499709_+	ATP-dependent DNA helicase RecQ	A0A2P1EM61	Moumouvirus	1.4e-55	33.6

DBSCAN-SWA_37

509133 : 514600

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043863.1\|509133_509406_+	DNA-binding protein HU	A7KV42	Bacillus_phage	4.2e-28	73.3
WP_000450555.1\|509836_510409_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_061743899.1\|510411_511137_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_001817755.1\|511153_512098_+	heptaprenyl diphosphate synthase subunit II	A0A1V0SE37	Indivirus	1.3e-10	24.4
WP_000442480.1\|512189_512639_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_000789522.1\|512847_513048_+	hypothetical protein	NA	NA	NA	NA
WP_001269921.1\|513433_514600_+	chorismate synthase	A0A291AU41	Pandoravirus	5.8e-34	31.8

DBSCAN-SWA_38

518262 : 518838

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000005212.1\|518262_518838_+	IDEAL domain-containing protein	G3MAV7	Bacillus_virus	2.1e-08	27.2

DBSCAN-SWA_39

522208 : 529714

unidentified_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000361552.1\|522208_523411_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.9e-35	43.3
WP_000049923.1\|523397_524369_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_000525078.1\|524392_527086_+	ATP-dependent helicase DinG	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000858789.1\|527407_528700_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.9e-54	30.0
WP_000362220.1\|529027_529714_+	DnaD domain-containing protein	Q938N2	Temperate_phage	5.5e-08	32.6

DBSCAN-SWA_40

533455 : 534082

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001108889.1\|533455_534082_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5

DBSCAN-SWA_41

543407 : 544286

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001133021.1\|543407_544286_+	5'-3' exonuclease	S5M4P0	Bacillus_phage	1.4e-19	29.5

DBSCAN-SWA_42

570267 : 579654

Staphylococcus_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000282171.1\|570267_570972_-	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	8.4e-12	23.8
WP_001795441.1\|571216_571411_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_160179369.1\|571422_571674_+	scaffolding protein	NA	NA	NA	NA
WP_000404645.1\|571711_572836_+	virulence factor C	NA	NA	NA	NA
WP_000995287.1\|572851_573289_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_000934887.1\|573712_574669_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.3e-167	85.2
WP_000175746.1\|574868_575348_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	2.0e-73	79.9
WP_047928450.1\|575362_576202_+	fatty acid kinase FakB2	A0A0N9SI50	Staphylococcus_phage	2.3e-48	77.3
WP_000159900.1\|576287_576821_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000913317.1\|576813_577242_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_000473653.1\|577253_577754_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_000801007.1\|577753_577975_+	hypothetical protein	NA	NA	NA	NA
WP_000342144.1\|578163_579654_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	5.9e-23	30.8

DBSCAN-SWA_43

583063 : 585075

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000192137.1\|583063_583723_+	response regulator transcription factor ArlR	W8CYM9	Bacillus_phage	1.1e-34	33.8
WP_000166801.1\|583719_585075_+	sensor histidine kinase ArlS	A0A1V0SGX0	Hokovirus	3.5e-14	27.8

DBSCAN-SWA_44

591240 : 592032

Halovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001185421.1\|591240_592032_+	MoxR family ATPase	R4TG24	Halovirus	3.3e-12	34.2

DBSCAN-SWA_45

595572 : 600603

Lactobacillus_phage(33.33%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000138413.1\|595572_596709_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	7.4e-34	28.3
WP_001788788.1\|596740_597370_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_001215907.1\|597388_597658_-	acylphosphatase	NA	NA	NA	NA
WP_000269923.1\|597820_598129_+	DUF1033 family protein	NA	NA	NA	NA
WP_000809131.1\|598299_598500_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	66.2
WP_000876201.1\|598696_599098_+	sarA expression modulator protein Msa	NA	NA	NA	NA
WP_000216946.1\|599337_600603_-	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	6.2e-13	23.2

DBSCAN-SWA_46

608650 : 610252

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000942303.1\|608650_610252_-	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	5.5e-51	25.7

DBSCAN-SWA_47

615340 : 618794

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000079447.1\|615340_616192_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.9e-16	29.7
WP_000974847.1\|616198_616840_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000077571.1\|616979_618794_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.1e-154	47.1

DBSCAN-SWA_48

622208 : 622910

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571259.1\|622208_622910_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.0e-13	30.3

DBSCAN-SWA_49

631007 : 633362

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153613.1\|631007_631790_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.7e-27	35.9
WP_047928445.1\|631791_632790_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	8.5e-34	34.9
WP_000604816.1\|632795_633362_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-23	32.1

DBSCAN-SWA_50

637680 : 638943

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000283016.1\|637680_638943_-	Y-family DNA polymerase	O64031	Bacillus_phage	2.6e-96	44.3

DBSCAN-SWA_51

648602 : 652996

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289579.1\|648602_651005_-	DNA topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	4.2e-95	32.7
WP_001548666.1\|651004_652996_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	8.0e-116	40.5

DBSCAN-SWA_52

658816 : 660463

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001088978.1\|658816_660463_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.5e-22	24.4

DBSCAN-SWA_53

664132 : 665254

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000691284.1\|664132_665254_-	exonuclease SbcCD subunit D	A0A1X9I9U0	Staphylococcus_phage	4.3e-10	22.7

DBSCAN-SWA_54

669403 : 675059

Phage_Wrath(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001208760.1\|669403_670027_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	3.5e-17	63.8
WP_000380719.1\|670406_671270_-	CAP domain-containing protein	U5Q0C0	Bacillus_phage	4.1e-16	41.5
WP_001791425.1\|671343_671448_+	hypothetical protein	NA	NA	NA	NA
WP_000688122.1\|671444_672422_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	8.0e-186	99.7
WP_001085655.1\|672578_672848_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_001265708.1\|673301_673451_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000082539.1\|673541_675059_-	catalase	A0A2K9L0T1	Tupanvirus	2.3e-91	43.2

DBSCAN-SWA_55

685211 : 697322

Staphylococcus_phage(58.33%)

integrase

attL 695520:695534|attR 703903:703917

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_061743908.1\|685211_685745_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.4e-21	43.5
WP_001027143.1\|685883_686072_+	hypothetical protein	NA	NA	NA	NA
WP_000202390.1\|686185_686788_-	response regulator transcription factor	NA	NA	NA	NA
WP_000670303.1\|686784_687876_-	sensor histidine kinase	NA	NA	NA	NA
WP_000603964.1\|687879_688611_-	ABC transporter permease	NA	NA	NA	NA
WP_072384901.1\|688579_689488_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.4e-21	27.6
WP_000786634.1\|691529_691796_-	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	3.0e-18	53.6
WP_000786993.1\|691785_692103_-	DUF2482 family protein	W5RAK4	Staphylococcus_phage	1.6e-39	80.6
WP_000072840.1\|692189_692351_-	DUF1270 family protein	R4IH12	Staphylococcus_phage	1.1e-12	69.8
WP_001157025.1\|692449_693133_-	phage repressor protein	A9CR56	Staphylococcus_phage	5.2e-107	85.6
WP_000800341.1\|693193_693400_+	hypothetical protein	A1BTY8	Staphylococcus_virus	3.3e-25	75.0
WP_000932238.1\|693823_694099_-	hypothetical protein	NA	NA	NA	NA
WP_001209962.1\|694125_694344_-	DUF739 family protein	A0A2I6PE94	Staphylococcus_phage	4.9e-19	62.5
WP_000664917.1\|694511_694904_+	helix-turn-helix domain-containing protein	A0A2I6PE55	Staphylococcus_phage	1.6e-28	53.6
WP_000554410.1\|695050_695434_+	hypothetical protein	NA	NA	NA	NA
WP_031587096.1\|695445_696141_+	hypothetical protein	A0A2H4J5B8	uncultured_Caudovirales_phage	1.4e-06	50.3
695520:695534	attL	NA	NA	NA	NA
WP_108630597.1\|696193_696484_+	hypothetical protein	A0A1W6JQD3	Staphylococcus_phage	7.0e-05	51.9
WP_031797583.1\|696605_697322_+\|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	4.1e-22	34.7
703903:703917	attR	NA	NA	NA	NA

DBSCAN-SWA_56

702038 : 702515

Fowlpox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000448078.1\|702038_702515_+	glutathione peroxidase	Q70H87	Fowlpox_virus	1.2e-22	38.0

DBSCAN-SWA_57

708457 : 714939

Acanthocystis_turfacea_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001103743.1\|708457_709276_-	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	2.4e-26	35.1
WP_001077635.1\|709750_710293_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_000516264.1\|710298_712308_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.8e-60	30.7
WP_000073352.1\|712320_714939_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	8.5e-41	23.7

DBSCAN-SWA_58

724353 : 725397

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368166.1\|724353_725397_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.3e-124	69.2

DBSCAN-SWA_59

729596 : 735140

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_158172995.1\|729596_730883_-	peptidase M16	G3MBJ8	Bacillus_virus	6.7e-15	27.9
WP_000089946.1\|730882_732148_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.6e-40	26.8
WP_001293307.1\|732178_732892_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001806691.1\|732896_735140_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.9e-84	47.7

DBSCAN-SWA_60

740280 : 752094

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000864185.1\|740280_741252_-	riboflavin biosynthesis protein RibF	A0A1V0SJE1	Klosneuvirus	1.7e-07	32.1
WP_000282302.1\|741266_742184_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000097322.1\|742353_742704_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_031587224.1\|743089_745207_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	1.8e-25	25.1
WP_000020853.1\|745211_745529_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000727423.1\|745525_745810_-	YlxR family protein	NA	NA	NA	NA
WP_000097461.1\|745830_747006_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000036633.1\|747026_747494_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_078170913.1\|747783_752094_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	3.5e-23	41.2

DBSCAN-SWA_61

756342 : 757113

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000473705.1\|756342_757113_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	7.3e-25	41.5

DBSCAN-SWA_62

761891 : 773096

Erwinia_phage(20.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000379049.1\|761891_763295_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	1.3e-27	25.8
WP_000072681.1\|763360_763906_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_160179378.1\|763902_764799_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	1.4e-30	31.2
WP_000195260.1\|765215_766523_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_160179380.1\|766678_768754_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	3.9e-105	39.1
WP_000931872.1\|768927_769800_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_000110253.1\|770123_771032_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.0e-17	33.2
WP_001020801.1\|771053_772220_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_000176406.1\|772328_773096_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	1.9e-25	44.1

DBSCAN-SWA_63

786649 : 788770

Acanthamoeba_polyphaga_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000043237.1\|786649_787381_-	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8
WP_000426914.1\|787496_787730_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000167269.1\|788035_788770_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3

DBSCAN-SWA_64

799140 : 801135

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000579564.1\|799140_801135_-	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8

DBSCAN-SWA_65

804282 : 805218

Prochlorococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161281.1\|804282_805218_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	3.6e-10	28.9

DBSCAN-SWA_66

810231 : 812488

Methanothermobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000722165.1\|810231_811431_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.2e-42	32.9
WP_000933956.1\|811646_811865_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000368227.1\|811864_812488_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	3.6e-22	34.7

DBSCAN-SWA_67

815802 : 816414

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001040248.1\|815802_816414_-	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	1.6e-27	33.8

DBSCAN-SWA_68

820381 : 824992

Halovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001190913.1\|820381_821482_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.6e-63	36.7
WP_000767028.1\|821483_822758_-	dihydroorotase	NA	NA	NA	NA
WP_001016166.1\|822775_823657_-	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.6e-31	33.9
WP_001178619.1\|823684_824992_-	uracil permease	Q9KX94	Enterobacteria_phage	3.3e-54	34.0

DBSCAN-SWA_69

829456 : 832210

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000384691.1\|829456_832210_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	3.6e-90	28.0

DBSCAN-SWA_70

851793 : 851982

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001245802.1\|851793_851982_-	hypothetical protein	A0A0K1LL29	Staphylococcus_phage	3.8e-20	86.9

DBSCAN-SWA_71

861065 : 863025

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076692497.1\|861065_861290_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	5.6e-18	71.4
WP_000765709.1\|861246_861393_-	hypothetical protein	NA	NA	NA	NA
WP_000857488.1\|862065_863025_+	beta-channel forming cytolysin	A0A2H4PQH7	Staphylococcus_phage	7.4e-35	30.3

DBSCAN-SWA_72

869823 : 870411

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000659313.1\|869823_870411_-	XTP/dITP diphosphatase	A0A2H4UUV7	Bodo_saltans_virus	1.3e-10	28.9

DBSCAN-SWA_73

877134 : 881692

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001018928.1\|877134_877449_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.6e-25	46.6
WP_047928316.1\|877621_879970_-	endonuclease MutS2	F2QAF8	Phaeocystis_pouchetii_virus	7.2e-15	25.1
WP_000161940.1\|879979_881692_-	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	8.9e-15	24.0

DBSCAN-SWA_74

886699 : 887758

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003563.1\|886699_887758_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5

DBSCAN-SWA_75

899693 : 902601

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000401377.1\|899693_900176_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2
WP_001263796.1\|900177_900720_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_047928303.1\|900789_901179_+	hypothetical protein	NA	NA	NA	NA
WP_001049150.1\|901181_901436_-	YlbG family protein	NA	NA	NA	NA
WP_000757570.1\|901674_902601_+	glycerophosphodiester phosphodiesterase	M1I1K8	Paramecium_bursaria_Chlorella_virus	1.7e-12	26.2

DBSCAN-SWA_76

914118 : 915966

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000182654.1\|914118_915966_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	1.8e-21	26.2

DBSCAN-SWA_77

924099 : 932931

Mycoplasma_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000433551.1\|924099_925194_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-37	44.3
WP_001020625.1\|925206_925746_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000455596.1\|925889_926165_-	UPF0223 family protein	NA	NA	NA	NA
WP_000260117.1\|926331_927738_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-46	29.1
WP_000863440.1\|927741_929034_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_160179393.1\|929124_930102_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_000035320.1\|930105_931218_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	A0A0K0KW14	Prochlorococcus_phage	1.4e-05	27.8
WP_000668339.1\|931388_932015_-	cell-wall-binding lipoprotein	NA	NA	NA	NA
WP_000957036.1\|932379_932931_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-13	42.2

DBSCAN-SWA_78

938943 : 943323

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289618.1\|938943_939177_+	glutaredoxin family protein	G3MBF0	Bacillus_virus	8.4e-09	38.7
WP_000040052.1\|939413_941132_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_000437472.1\|941134_941401_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_000505966.1\|941554_942097_-	hypothetical protein	NA	NA	NA	NA
WP_000685067.1\|942150_943323_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.0e-75	42.8

DBSCAN-SWA_79

946438 : 961200

Prochlorococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000921965.1\|946438_947839_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-10	26.3
WP_000273253.1\|947831_948638_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_001101899.1\|948904_950152_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_047928251.1\|950173_951652_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.2e-77	51.8
WP_000238669.1\|951666_952233_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1
WP_000030811.1\|952235_953264_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.4e-62	41.7
WP_000483713.1\|953256_954741_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
WP_000032740.1\|954719_956909_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.5e-141	39.8
WP_000666806.1\|956901_957573_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000848350.1\|957574_957838_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_160179395.1\|957837_958542_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
WP_001010413.1\|958545_959670_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000861572.1\|959656_960139_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
WP_000225837.1\|960339_961200_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.3e-40	39.2

DBSCAN-SWA_80

971653 : 975424

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001074552.1\|971653_975424_+	bifunctional autolysin	A0A1J0MFB0	Staphylococcus_phage	1.1e-54	37.6

DBSCAN-SWA_81

979090 : 980101

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031775067.1\|979090_980101_+	Glu-specific serine endopeptidase SspA	A0A2H4PQP7	Staphylococcus_phage	6.2e-16	32.3

DBSCAN-SWA_82

988406 : 992128

Enterococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001788574.1\|988406_988697_+	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
WP_001790177.1\|988760_988892_+	hypothetical protein	NA	NA	NA	NA
WP_000766009.1\|990385_990742_+	DoxX family protein	NA	NA	NA	NA
WP_001792054.1\|990830_990968_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
WP_001795266.1\|991108_991399_+	hypothetical protein	NA	NA	NA	NA
WP_000571167.1\|991486_992128_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.7e-19	33.0

DBSCAN-SWA_83

1002322 : 1007533

Pithovirus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001795272.1\|1002322_1004647_-\|protease	serine protease	W5SAB9	Pithovirus	2.8e-11	27.4
WP_000928413.1\|1004865_1005669_-	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_001049951.1\|1005970_1007533_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	1.7e-36	28.2

DBSCAN-SWA_84

1026463 : 1028272

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082725.1\|1026463_1028272_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.5e-47	24.5

DBSCAN-SWA_85

1034085 : 1036055

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427769.1\|1034085_1035066_-	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-16	34.1
WP_001067040.1\|1035068_1036055_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-15	30.0

DBSCAN-SWA_86

1039706 : 1041720

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000786736.1\|1039706_1040648_-	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	1.6e-05	26.9
WP_000140050.1\|1040637_1041720_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-19	28.8

DBSCAN-SWA_87

1050315 : 1057125

Micromonas_sp._RCC1109_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000619360.1\|1050315_1051461_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.5e-05	26.0
WP_001047069.1\|1051570_1052440_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000353954.1\|1052498_1055108_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	5.5e-117	34.3
WP_001044219.1\|1055310_1057125_-	acetyltransferase	B5WZU0	Pseudomonas_phage	3.0e-37	34.2

DBSCAN-SWA_88

1062735 : 1066389

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179407.1\|1062735_1066389_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	7.7e-24	24.3

DBSCAN-SWA_89

1076543 : 1083621

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185319.1\|1076543_1077473_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	3.7e-39	37.9
WP_000138487.1\|1077895_1079140_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_047928208.1\|1079248_1080439_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.3e-33	29.7
WP_000838039.1\|1080747_1081875_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_001067294.1\|1082235_1082613_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000035058.1\|1083027_1083621_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.1e-25	41.3

DBSCAN-SWA_90

1093541 : 1097169

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001009687.1\|1093541_1095017_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.9e-48	34.9
WP_000046076.1\|1095147_1096356_-	NADH dehydrogenase	NA	NA	NA	NA
WP_001143497.1\|1096809_1097169_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	2.1e-14	38.6

DBSCAN-SWA_91

1101212 : 1103881

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000613541.1\|1101212_1102427_-	PG:teichoic acid D-alanyltransferase DltB	A0A125RNP0	Pseudomonas_phage	8.5e-20	26.1
WP_000129653.1\|1102423_1103881_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	4.4e-39	28.3

DBSCAN-SWA_92

1117089 : 1120612

environmental_halophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001807949.1\|1117089_1118331_-	cysteine desulfurase	Q2XUY6	environmental_halophage	6.3e-111	44.8
WP_000205582.1\|1118445_1119753_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_160179413.1\|1119850_1120612_-	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	2.6e-06	23.3

DBSCAN-SWA_93

1124099 : 1133237

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928199.1\|1124099_1125125_-	methionine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-26	33.3
WP_001065801.1\|1125374_1125671_-	thioredoxin family protein	NA	NA	NA	NA
WP_001018962.1\|1125663_1126050_-	topiosmerase	NA	NA	NA	NA
WP_000932211.1\|1126464_1127343_-	DUF1963 domain-containing protein	NA	NA	NA	NA
WP_000662306.1\|1127344_1127458_-	hypothetical protein	NA	NA	NA	NA
WP_000290489.1\|1127521_1127902_-	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_000589549.1\|1128059_1128416_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.7e-19	46.6
WP_001190695.1\|1128559_1128880_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	3.1e-06	36.4
WP_000422908.1\|1129029_1129569_-	nitroreductase	NA	NA	NA	NA
WP_000150016.1\|1129651_1130368_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	1.0e-17	30.6
WP_000974460.1\|1130515_1130938_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000569884.1\|1131336_1131831_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000255553.1\|1131986_1132604_+	amino acid transporter	NA	NA	NA	NA
WP_072353886.1\|1132676_1133237_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	2.2e-31	40.9

DBSCAN-SWA_94

1136641 : 1137885

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001059082.1\|1136641_1136842_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.4e-20	70.8
WP_160179415.1\|1137198_1137885_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	1.4e-32	53.4

DBSCAN-SWA_95

1147051 : 1154794

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000757401.1\|1147051_1147780_+	DUF5067 domain-containing protein	H9A0X8	Staphylococcus_phage	1.4e-17	36.8
WP_001085185.1\|1148644_1149109_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.5e-81	100.0
WP_160179419.1\|1149130_1151503_-	ribonuclease R	Q0GXV6	Lactococcus_phage	6.6e-93	39.0
WP_001165964.1\|1151536_1152277_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_000556760.1\|1152392_1152626_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_000785252.1\|1152692_1153151_-	hypothetical protein	NA	NA	NA	NA
WP_001121760.1\|1153489_1154794_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.7e-196	80.7

DBSCAN-SWA_96

1163912 : 1169674

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001049165.1\|1163912_1164500_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.2e-53	55.3
WP_000006551.1\|1165073_1166018_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.1e-54	40.6
WP_001248939.1\|1166128_1167124_-	YvcK family protein	A1IMD5	Streptococcus_phage	4.8e-53	41.9
WP_000369722.1\|1167120_1168032_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	36.1
WP_000134963.1\|1168738_1169674_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.9e-84	49.2

DBSCAN-SWA_97

1174183 : 1177030

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000662681.1\|1174183_1177030_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.1

DBSCAN-SWA_98

1180348 : 1181188

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000753320.1\|1180348_1181188_-	CHAP domain-containing protein	A0A2H4J675	uncultured_Caudovirales_phage	3.5e-12	42.2

DBSCAN-SWA_99

1187266 : 1192979

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001793589.1\|1187266_1188349_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	2.0e-44	35.5
WP_000686342.1\|1188712_1189579_-	DegV family protein	NA	NA	NA	NA
WP_000192949.1\|1189722_1190364_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	5.3e-37	47.7
WP_000258151.1\|1190535_1191591_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_000460983.1\|1191908_1192979_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-16	33.5

DBSCAN-SWA_100

1202259 : 1225767

uncultured_Caudovirales_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000616842.1\|1202259_1203021_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6
WP_001245577.1\|1203017_1203974_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
WP_000876318.1\|1203960_1204932_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
WP_000499195.1\|1204970_1205126_-	hypothetical protein	NA	NA	NA	NA
WP_000562498.1\|1205639_1206611_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
WP_000855505.1\|1206728_1208834_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000692521.1\|1208796_1209195_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_001068494.1\|1209995_1210862_+	DMT family transporter	NA	NA	NA	NA
WP_000930014.1\|1210881_1211382_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
WP_000193751.1\|1211722_1213228_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_001790641.1\|1213305_1213407_-	hypothetical protein	NA	NA	NA	NA
WP_000429014.1\|1213497_1214415_+	lipid kinase	A0A1V0SBJ0	Catovirus	3.7e-07	22.0
WP_000197271.1\|1215038_1215581_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_061743932.1\|1215875_1216934_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	1.4e-21	26.7
WP_000180991.1\|1217173_1218688_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_000589260.1\|1218680_1219658_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-25	33.3
WP_000983677.1\|1219879_1221661_-	DNA helicase RecQ	A0A2P1EM61	Moumouvirus	6.5e-77	37.0
WP_076692510.1\|1221672_1223556_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.0e-55	30.6
WP_000098285.1\|1223826_1225767_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	1.3e-110	39.5

DBSCAN-SWA_101

1228906 : 1238752

Pandoravirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001217802.1\|1228906_1230058_-	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	1.2e-23	36.1
WP_000604514.1\|1230041_1230635_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_000446724.1\|1230985_1231654_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
WP_000941336.1\|1231655_1232075_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_001062972.1\|1232078_1232792_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000604990.1\|1232890_1233475_+	hypothetical protein	NA	NA	NA	NA
WP_001093562.1\|1233754_1234195_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001037807.1\|1234536_1235010_+	DoxX family protein	NA	NA	NA	NA
WP_160179427.1\|1234984_1235671_+	response regulator transcription factor	NA	NA	NA	NA
WP_000244417.1\|1235670_1236726_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	1.6e-14	29.5
WP_000702781.1\|1236797_1237781_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	1.5e-62	43.3
WP_000931237.1\|1237912_1238752_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.1e-56	42.3

DBSCAN-SWA_102

1250364 : 1251738

Powai_lake_megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000952026.1\|1250364_1251738_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	5.1e-45	33.6

DBSCAN-SWA_103

1256715 : 1262995

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000857624.1\|1256715_1258389_-	amino acid ABC transporter ATP-binding/permease protein	W8CYL7	Bacillus_phage	4.5e-11	23.4
WP_000737150.1\|1258385_1260017_-	ABC transporter ATP-binding protein/permease	W5SAS9	Pithovirus	6.7e-12	27.8
WP_000469890.1\|1260235_1261111_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000358498.1\|1261282_1261966_+	hypothetical protein	NA	NA	NA	NA
WP_000148828.1\|1261968_1262427_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_000820892.1\|1262428_1262995_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.1e-21	36.9

DBSCAN-SWA_104

1269917 : 1270391

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833486.1\|1269917_1270391_-	cupin	A0A291AU44	Pandoravirus	1.6e-14	39.4

DBSCAN-SWA_105

1275653 : 1276451

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000731644.1\|1275653_1276451_+	LysM peptidoglycan-binding domain-containing protein	A0A223LD43	Bacillus_phage	1.2e-06	30.2

DBSCAN-SWA_106

1281281 : 1282043

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000985996.1\|1281281_1282043_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-33	34.8

DBSCAN-SWA_107

1286417 : 1287461

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030771.1\|1286417_1287461_-	alpha/beta hydrolase	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	2.0e-17	26.6

DBSCAN-SWA_108

1293982 : 1294780

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001080809.1\|1293982_1294780_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	30.7

DBSCAN-SWA_109

1298005 : 1301964

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000817954.1\|1298005_1299733_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-110	43.3
WP_000793067.1\|1300153_1301449_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-14	26.9
WP_000832260.1\|1301565_1301964_-	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	3.2e-16	39.9

DBSCAN-SWA_110

1308891 : 1309635

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894464.1\|1308891_1309635_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.2e-11	29.7

DBSCAN-SWA_111

1320519 : 1321080

Streptococcus_phage(100.0%)

integrase

attL 1314673:1314687|attR 1324668:1324682

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1314673:1314687	attL	NA	NA	NA	NA
WP_001044915.1\|1320519_1321080_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
WP_001044915.1\|1320519_1321080_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
1324668:1324682	attR	NA	NA	NA	NA

DBSCAN-SWA_112

1333969 : 1337323

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001200748.1\|1333969_1334980_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	5.6e-33	27.3
WP_001788287.1\|1335478_1336000_-	hypothetical protein	NA	NA	NA	NA
WP_000180145.1\|1336027_1337323_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	2.1e-24	27.9

DBSCAN-SWA_113

1344630 : 1345953

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000860587.1\|1344630_1345953_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.4e-108	47.1

DBSCAN-SWA_114

1357257 : 1357914

Elephant_endotheliotropic_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455256.1\|1357257_1357914_-	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	1.1e-45	46.4

DBSCAN-SWA_115

1361554 : 1364875

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100835.1\|1361554_1362931_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.9e-21	24.5
WP_031588860.1\|1363474_1364875_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.4e-55	32.8

DBSCAN-SWA_116

1383579 : 1384242

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067255.1\|1383579_1384242_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.1e-24	37.4

DBSCAN-SWA_117

1390821 : 1392009

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000250823.1\|1390821_1392009_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	4.4e-45	30.6

DBSCAN-SWA_118

1395037 : 1405991

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090315.1\|1395037_1397119_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.7e-66	28.3
WP_001137495.1\|1397241_1397712_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_001142337.1\|1397777_1398191_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_000031892.1\|1398288_1398543_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_001788197.1\|1398679_1402276_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	3.3e-67	24.6
WP_000918667.1\|1402439_1405991_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.1e-50	24.3

DBSCAN-SWA_119

1409674 : 1414457

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288302.1\|1409674_1410223_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	8.6e-12	33.5
WP_001074473.1\|1410235_1410418_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001788193.1\|1410473_1410617_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000872876.1\|1410731_1411301_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_000664738.1\|1411381_1411906_-	NYN domain-containing protein	NA	NA	NA	NA
WP_000390332.1\|1411905_1412652_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000370182.1\|1412659_1413064_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_098691770.1\|1413056_1414457_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.9e-55	32.0

DBSCAN-SWA_120

1420467 : 1422924

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000897132.1\|1420467_1422924_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	A0A1C3S747	Escherichia_phage	1.4e-133	41.2

DBSCAN-SWA_121

1441849 : 1452121

Catovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288202.1\|1441849_1443337_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.1e-92	41.1
WP_001790128.1\|1443389_1443482_-	hypothetical protein	NA	NA	NA	NA
WP_000613716.1\|1443875_1444352_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_001154302.1\|1444348_1444714_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000167924.1\|1444691_1445495_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.3e-21	29.3
WP_000057594.1\|1445710_1446643_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.7e-108	65.7
WP_000148594.1\|1446821_1447703_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_160179444.1\|1447931_1450025_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQ50	Micromonas_sp._RCC1109_virus	1.2e-109	42.5
WP_000551283.1\|1450281_1450821_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.5e-12	29.8
WP_001176728.1\|1450825_1452121_-\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SI91	Klosneuvirus	8.2e-13	24.5

DBSCAN-SWA_122

1461377 : 1463842

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179447.1\|1461377_1462343_-	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	2.3e-44	35.1
WP_047928174.1\|1462489_1463842_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	A0A2K9L821	Tupanvirus	8.3e-24	30.4

DBSCAN-SWA_123

1469727 : 1472825

Klosneuvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001051129.1\|1469727_1471701_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-93	36.2
WP_000279926.1\|1471985_1472825_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-57	45.8

DBSCAN-SWA_124

1476731 : 1477349

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272126.1\|1476731_1477349_-	dTMP kinase	M1PSC7	Streptococcus_phage	9.2e-47	48.3

DBSCAN-SWA_125

1486521 : 1488219

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001109047.1\|1486521_1488219_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.9e-54	42.3

DBSCAN-SWA_126

1504872 : 1511113

Lactobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928170.1\|1504872_1505877_-	autolysin/adhesin Aaa	A0A0A7NU10	Lactobacillus_phage	3.3e-25	42.2
WP_031589187.1\|1506208_1507051_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_000467991.1\|1507087_1507747_-	ABC transporter permease	NA	NA	NA	NA
WP_000569289.1\|1507750_1508776_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.1e-31	36.8
WP_001036648.1\|1509072_1510215_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA
WP_160179538.1\|1510207_1511113_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	6.5e-49	39.4

DBSCAN-SWA_127

1534893 : 1537669

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000072580.1\|1534893_1536120_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	4.8e-47	36.1
WP_000028670.1\|1536112_1537669_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-288	98.3

DBSCAN-SWA_128

1552050 : 1555070

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000212549.1\|1552050_1552383_-	hypothetical protein	A0A0N9SJ02	Staphylococcus_phage	1.7e-10	54.8
WP_047928163.1\|1552883_1553729_-	aminoglycoside 6-adenylyltransferase	A0A1X9I6F2	Streptococcus_phage	7.7e-52	40.1
WP_000800379.1\|1554317_1555070_+	S8 family serine peptidase	A0A1W6JND5	Lactococcus_phage	9.6e-14	32.2

DBSCAN-SWA_129

1559986 : 1563019

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000424964.1\|1559986_1561528_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	32.6
WP_000264071.1\|1561552_1563019_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5

DBSCAN-SWA_130

1571978 : 1573502

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000930501.1\|1571978_1573502_+	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	1.9e-40	33.6

DBSCAN-SWA_131

1580971 : 1589388

Staphylococcus_phage(66.67%)

integrase

attL 1579010:1579024|attR 1585425:1585439

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1579010:1579024	attL	NA	NA	NA	NA
WP_001808003.1\|1580971_1581109_+	hypothetical protein	Q4ZE80	Staphylococcus_phage	2.8e-12	75.6
WP_115304765.1\|1581207_1581435_+\|integrase	tyrosine-type recombinase/integrase	Q4ZE80	Staphylococcus_phage	5.1e-11	66.0
WP_001817700.1\|1581556_1582495_+	Abi family protein	NA	NA	NA	NA
WP_000897044.1\|1582760_1583003_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_000934799.1\|1583054_1583558_-	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_001261460.1\|1583578_1583875_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_001052483.1\|1584118_1584310_+	hypothetical protein	U3PCX8	Staphylococcus_phage	4.9e-23	80.0
WP_001218732.1\|1584395_1585493_-	redox-regulated ATPase YchF	NA	NA	NA	NA
1585425:1585439	attR	NA	NA	NA	NA
WP_000157345.1\|1585504_1585708_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_001077602.1\|1585737_1586619_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_001566903.1\|1586775_1587621_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	1.6e-12	34.4
WP_000655707.1\|1588284_1589388_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	4.6e-12	29.0

DBSCAN-SWA_132

1599324 : 1600167

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000209566.1\|1599324_1600167_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-12	27.2

DBSCAN-SWA_133

1621437 : 1624172

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000280799.1\|1621437_1622460_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	6.7e-10	30.4
WP_001191945.1\|1622437_1623382_-	NAD-dependent deacetylase	NA	NA	NA	NA
WP_000449066.1\|1623371_1624172_-	protein-ADP-ribose hydrolase	A0A2K9L8X2	Tupanvirus	1.2e-41	43.9

DBSCAN-SWA_134

1642408 : 1643086

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000911017.1\|1642408_1643086_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-31	38.9

DBSCAN-SWA_135

1658756 : 1663196

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000549287.1\|1658756_1663196_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	6.3e-28	25.6

DBSCAN-SWA_136

1673801 : 1675463

Amsacta_moorei_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570070.1\|1673801_1674461_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	7.6e-23	37.2
WP_000736783.1\|1674512_1675463_-	glycine-glycine endopeptidase LytM	V5R8R0	Arthrobacter_phage	1.5e-16	42.7

DBSCAN-SWA_137

1684700 : 1686137

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000164009.1\|1684700_1686137_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	2.8e-30	25.8

DBSCAN-SWA_138

1689897 : 1694436

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000925394.1\|1689897_1691637_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.5e-62	31.5
WP_000608832.1\|1691896_1692571_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA
WP_000975345.1\|1692714_1694436_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.1e-11	37.4

DBSCAN-SWA_139

1704444 : 1705488

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000645615.1\|1704444_1705488_-	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	1.2e-14	25.0

DBSCAN-SWA_140

1712702 : 1714232

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000838204.1\|1712702_1714232_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	5.3e-11	52.0

DBSCAN-SWA_141

1723108 : 1724614

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928108.1\|1723108_1724614_+	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.3e-38	25.7

DBSCAN-SWA_142

1735758 : 1741117

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894660.1\|1735758_1738008_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.7e-186	45.1
WP_000837103.1\|1738595_1739564_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000127982.1\|1739560_1741117_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.8e-13	27.2

DBSCAN-SWA_143

1751327 : 1753387

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000818915.1\|1751327_1752425_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.4e-24	35.6
WP_000166921.1\|1752808_1753387_-	M23 family metallopeptidase	A0A2K9VGT1	Pontimonas_phage	4.3e-14	40.1

DBSCAN-SWA_144

1761921 : 1765063

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928087.1\|1761921_1763514_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-16	29.9
WP_001558793.1\|1764385_1765063_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.6e-20	34.4

DBSCAN-SWA_145

1768978 : 1769659

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571406.1\|1768978_1769659_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.8e-33	37.0

DBSCAN-SWA_146

1786449 : 1787634

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001084436.1\|1786449_1787634_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	9.2e-35	29.2

DBSCAN-SWA_147

1801725 : 1802751

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000706137.1\|1801725_1802751_-	NAD-dependent formate dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-29	33.9

DBSCAN-SWA_148

1806290 : 1809521

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000590844.1\|1806290_1807031_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-39	41.1
WP_000171919.1\|1807372_1807885_-	DUF4242 domain-containing protein	NA	NA	NA	NA
WP_000356963.1\|1808063_1808267_+	hypothetical protein	NA	NA	NA	NA
WP_001013481.1\|1808561_1809521_-	cation transporter	A0A1V0SED0	Indivirus	1.2e-11	34.2

DBSCAN-SWA_149

1812861 : 1815346

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723449.1\|1812861_1814007_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	3.2e-24	26.1
WP_000779492.1\|1814083_1815346_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	3.3e-22	25.5

DBSCAN-SWA_150

1822181 : 1828746

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413171.1\|1822181_1823306_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	6.7e-128	59.6
WP_001028286.1\|1823309_1824419_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_000459062.1\|1824431_1825460_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-41	35.3
WP_160179464.1\|1825449_1827273_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.3e-29	29.0
WP_000565293.1\|1827292_1828057_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_000037328.1\|1828059_1828746_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	3.7e-28	36.1

DBSCAN-SWA_151

1832771 : 1833947

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000469819.1\|1832771_1833947_-	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	2.3e-30	28.1

DBSCAN-SWA_152

1839285 : 1840059

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078092.1\|1839285_1840059_+	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-13	26.1

DBSCAN-SWA_153

1848096 : 1848696

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000874681.1\|1848096_1848696_-	Superoxide dismutase [Mn/Fe] 2	Q56AR7	Bacillus_thuringiensis_phage	7.6e-54	50.2

DBSCAN-SWA_154

1853632 : 1854613

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179468.1\|1853632_1854613_-	NAD-dependent epimerase/dehydratase family protein	A0A2H4UUK0	Bodo_saltans_virus	7.8e-48	37.5

DBSCAN-SWA_155

1857982 : 1859185

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928032.1\|1857982_1859185_-	staphyloferrin B biosynthesis decarboxylase SbnH	A0A2K9L4I2	Tupanvirus	5.1e-09	21.1

DBSCAN-SWA_156

1867451 : 1871661

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570808.1\|1867451_1868432_-	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	2.1e-40	35.6
WP_001045111.1\|1868662_1869655_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA
WP_160179470.1\|1869670_1870666_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA
WP_000136636.1\|1870662_1871661_+	staphyloferrin B ABC transporter permease subunit SirC	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-14	27.5

DBSCAN-SWA_157

1902337 : 1903405

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000816127.1\|1902337_1903405_-	persulfide response sulfurtransferase CstA	A0A2H4PQR9	Staphylococcus_phage	3.5e-09	41.5

DBSCAN-SWA_158

1910996 : 1921006

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088649.1\|1910996_1911797_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	1.0e-37	35.9
WP_001104166.1\|1912192_1912981_-	hypothetical protein	NA	NA	NA	NA
WP_061743967.1\|1912981_1914316_-	hypothetical protein	NA	NA	NA	NA
WP_000871607.1\|1914308_1916135_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
WP_000101976.1\|1916147_1916849_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-42	39.2
WP_047928004.1\|1918044_1919328_-	adenylosuccinate synthase	L7Y4J5	Megavirus	2.3e-68	34.6
WP_000375647.1\|1919605_1921006_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.4e-111	48.1

DBSCAN-SWA_159

1927696 : 1936736

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000884326.1\|1927696_1928983_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.7e-88	51.2
WP_000177462.1\|1929361_1930876_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	1.5e-90	38.4
WP_000449218.1\|1931201_1932014_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_047927991.1\|1932101_1934765_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.1e-119	35.9
WP_031588484.1\|1934801_1936736_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	7.4e-143	44.9

DBSCAN-SWA_160

1946818 : 1953243

Faecalibacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000742837.1\|1946818_1947658_+	nucleoid occlusion protein	A0A2K9V477	Faecalibacterium_phage	2.2e-06	23.8
WP_000491382.1\|1947975_1948329_+	DUF3147 family protein	NA	NA	NA	NA
WP_000779134.1\|1948396_1948792_+	DUF3147 family protein	NA	NA	NA	NA
WP_001054118.1\|1949051_1949621_+	helix-turn-helix domain-containing protein	D2XQ11	Bacillus_virus	6.2e-05	33.3
WP_001059079.1\|1949738_1949939_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-19	69.8
WP_000672041.1\|1950331_1950523_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA
WP_000143651.1\|1950614_1952495_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA
WP_000154162.1\|1952484_1953243_-	peptide resistance ABC transporter ATP-binding subunit VraD	G9BWD6	Planktothrix_phage	9.0e-36	39.5

DBSCAN-SWA_161

1968925 : 1969939

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000639185.1\|1968925_1969939_+	histidinol-phosphate aminotransferase family protein	A0A1X7QHI1	Faustovirus	9.6e-09	25.9

DBSCAN-SWA_162

1982185 : 1982878

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185863.1\|1982185_1982878_+	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	2.2e-28	38.0

DBSCAN-SWA_163

2008960 : 2010820

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001125611.1\|2008960_2010820_-	amidase domain-containing protein	A0A249Y0X5	Enterococcus_phage	9.7e-15	37.3

DBSCAN-SWA_164

2036425 : 2038177

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000143426.1\|2036425_2037313_+	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	3.3e-05	22.5
WP_000923760.1\|2037421_2038177_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-31	37.9

DBSCAN-SWA_165

2041597 : 2042095

Canarypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001065268.1\|2041597_2042095_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	1.8e-21	33.1

DBSCAN-SWA_166

2047143 : 2049527

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001071717.1\|2047143_2048994_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.2e-235	64.3
WP_000173329.1\|2048990_2049527_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.3e-41	48.6

DBSCAN-SWA_167

2054404 : 2064517

Klosneuvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000066521.1\|2054404_2056114_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	3.8e-58	32.3
WP_000011688.1\|2056391_2056604_+	hypothetical protein	NA	NA	NA	NA
WP_000708241.1\|2056883_2057327_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_001172340.1\|2057520_2059119_+	acetyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	5.3e-78	36.8
WP_031775001.1\|2059178_2059508_-	hypothetical protein	NA	NA	NA	NA
WP_001130051.1\|2059803_2061300_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_001031402.1\|2061492_2062383_-	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	1.6e-07	29.2
WP_001807954.1\|2062505_2062922_-	hypothetical protein	NA	NA	NA	NA
WP_000030070.1\|2063179_2064517_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	3.0e-18	26.7

DBSCAN-SWA_168

2093316 : 2097234

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000751276.1\|2093316_2094018_+	lytic transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	4.4e-37	45.9
WP_160179483.1\|2094423_2094912_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_031588406.1\|2095422_2097234_+	acetyltransferase	A0A1R3Y5Q6	Salmonella_virus	1.3e-35	31.5

DBSCAN-SWA_169

2105658 : 2109710

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179485.1\|2105658_2106657_+	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.0e-35	32.6
WP_000076661.1\|2106746_2106953_-	copper chaperone CopZ	NA	NA	NA	NA
WP_000024129.1\|2107301_2109710_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.9e-128	41.0

DBSCAN-SWA_170

2118944 : 2121980

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001058990.1\|2118944_2121050_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.2e-117	38.3
WP_000455986.1\|2121458_2121980_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.2e-26	41.7

DBSCAN-SWA_171

2129327 : 2135697

Yellowstone_lake_phycodnavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001062652.1\|2129327_2131067_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.3e-34	24.1
WP_000473680.1\|2131367_2133434_+	PTS glucoside EIICBA component	A0A2I7SAJ6	Vibrio_phage	8.3e-07	43.3
WP_000206033.1\|2133799_2134210_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_160179487.1\|2134251_2134590_+	thioredoxin family protein	NA	NA	NA	NA
WP_001228169.1\|2134728_2135697_+	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	5.2e-12	26.5

DBSCAN-SWA_172

2145410 : 2146403

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161536.1\|2145410_2146403_-	D-lactate dehydrogenase	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	1.1e-36	31.5

DBSCAN-SWA_173

2155687 : 2156383

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179491.1\|2155687_2156383_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.3e-38	38.4

DBSCAN-SWA_174

2177254 : 2185547

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000721335.1\|2177254_2178121_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	7.5e-79	52.6
WP_000966095.1\|2178296_2179490_+	MFS transporter	NA	NA	NA	NA
WP_072398205.1\|2179500_2179704_+	hypothetical protein	NA	NA	NA	NA
WP_000217714.1\|2179811_2180120_-	hypothetical protein	NA	NA	NA	NA
WP_000678764.1\|2180263_2180530_-	hypothetical protein	NA	NA	NA	NA
WP_078104177.1\|2180813_2182622_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.9e-95	38.1
WP_000446878.1\|2182739_2184209_+	DNA mismatch repair protein MutH	NA	NA	NA	NA
WP_001033636.1\|2184308_2185547_+	DNA cytosine methyltransferase	A0A141E0F9	Streptococcus_phage	8.4e-31	29.5

DBSCAN-SWA_175

2194245 : 2194941

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031586057.1\|2194245_2194941_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	8.6e-09	36.5

DBSCAN-SWA_176

2199864 : 2200683

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824946.1\|2199864_2200683_+	SDR family oxidoreductase	L7RG25	Acanthamoeba_polyphaga_moumouvirus	1.0e-08	28.7

DBSCAN-SWA_177

2208591 : 2210149

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000173866.1\|2208591_2209407_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-13	30.3
WP_000590515.1\|2209399_2210149_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-21	31.2

DBSCAN-SWA_178

2217290 : 2221719

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000923524.1\|2217290_2217953_+	ATP-binding cassette domain-containing protein	F2Y2R6	Organic_Lake_phycodnavirus	5.5e-21	31.3
WP_000072147.1\|2217945_2218722_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_000026194.1\|2219117_2220305_+	MFS transporter	NA	NA	NA	NA
WP_000700923.1\|2220366_2221719_-	carboxylesterase/lipase family protein	A0A0B5J865	Pandoravirus	2.5e-12	34.2

DBSCAN-SWA_179

2225527 : 2227386

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948981.1\|2225527_2226754_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-20	50.5
WP_000569120.1\|2226750_2227386_+	ABC transporter permease	G3M9Y4	Bacillus_virus	9.0e-05	26.2

DBSCAN-SWA_180

2245111 : 2251288

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001176863.1\|2245111_2246254_-	glycerate kinase	W6LM47	Streptococcus_phage	5.3e-56	44.3
WP_000779360.1\|2246511_2246898_+	GtrA family protein	NA	NA	NA	NA
WP_000482647.1\|2247031_2247139_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_001064816.1\|2247766_2249530_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.5e-37	24.9
WP_000486494.1\|2249554_2251288_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.0e-31	25.7

DBSCAN-SWA_181

2254749 : 2260521

Staphylococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160179495.1\|2254749_2255865_+	pyridoxal phosphate-dependent aminotransferase family protein	V5LQ39	Emiliania_huxleyi_virus	9.2e-21	24.7
WP_000286879.1\|2255875_2256568_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_000200945.1\|2256578_2257046_+	QueT transporter family protein	NA	NA	NA	NA
WP_000783428.1\|2257097_2258075_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	A0A2H4PQH7	Staphylococcus_phage	7.1e-142	76.2
WP_000916704.1\|2258076_2259024_-	bi-component gamma-hemolysin HlgCB subunit C	A0A2I6PER8	Staphylococcus_phage	3.2e-139	77.5
WP_000594519.1\|2259591_2260521_-	bi-component gamma-hemolysin HlgAB subunit A	A0A2H4PQI5	Staphylococcus_phage	3.2e-120	71.1

DBSCAN-SWA_182

2268345 : 2269077

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000615461.1\|2268345_2269077_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-25	34.7

DBSCAN-SWA_183

2285725 : 2287285

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692645.1\|2285725_2287285_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_184

2308819 : 2309854

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655972.1\|2308819_2309854_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	5.8e-17	26.6

DBSCAN-SWA_185

2321419 : 2325316

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000477332.1\|2321419_2322793_-	heme sensor histidine kinase HssS	A0A1V0SGX0	Hokovirus	1.3e-13	29.8
WP_000249497.1\|2322785_2323460_-	DNA-binding heme response regulator HssR	W8CYM9	Bacillus_phage	3.6e-52	45.2
WP_000761395.1\|2323595_2324651_+	ABC transporter permease	NA	NA	NA	NA
WP_001229920.1\|2324650_2325316_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-36	38.8

DBSCAN-SWA_186

2329055 : 2330264

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031775239.1\|2329055_2330264_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	7.9e-34	26.1

DBSCAN-SWA_187

2342354 : 2343254

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000524830.1\|2342354_2343254_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.2e-15	28.7

DBSCAN-SWA_188

2350621 : 2351041

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000920238.1\|2350621_2351041_-	FosB/FosD family fosfomycin resistance bacillithiol transferase	Q2LI91	Bacillus_phage	1.0e-36	61.1

DBSCAN-SWA_189

2356674 : 2357556

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000730034.1\|2356674_2357556_+	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	3.8e-62	45.9

DBSCAN-SWA_190

2365434 : 2366070

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285450.1\|2365434_2366070_+	HAD family hydrolase	A7J6N1	Paramecium_bursaria_Chlorella_virus	1.6e-09	27.1

DBSCAN-SWA_191

2379635 : 2383604

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011447058.1\|2379635_2380274_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JQU5	Staphylococcus_phage	2.6e-36	48.1
WP_000684145.1\|2380584_2381709_+	NAD(P)-binding protein	A0A2K9L3K5	Tupanvirus	1.2e-12	22.8
WP_000417015.1\|2381788_2382742_-	2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-31	28.9
WP_000737705.1\|2383103_2383604_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	2.0e-07	39.3

DBSCAN-SWA_192

2387521 : 2388331

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000717388.1\|2387521_2388331_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	9.4e-07	41.3

DBSCAN-SWA_193

2407313 : 2407919

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000913019.1\|2407313_2407919_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.8e-13	30.6

DBSCAN-SWA_194

2420003 : 2423171

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000592305.1\|2420003_2423171_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.1e-61	21.8

DBSCAN-SWA_195

2446855 : 2448522

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000389660.1\|2446855_2447665_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	1.7e-19	30.0
WP_047928595.1\|2447661_2448522_+	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	1.3e-09	23.9

DBSCAN-SWA_196

2453954 : 2459472

Vibrio_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000402465.1\|2453954_2455091_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2I7SAX5	Vibrio_phage	5.4e-08	27.0
WP_000655236.1\|2457178_2457361_+	hypothetical protein	NA	NA	NA	NA
WP_000130136.1\|2457807_2459472_+	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.4e-44	25.8

DBSCAN-SWA_197

2464556 : 2467654

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001015492.1\|2464556_2465405_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.7e-43	38.4
WP_001808034.1\|2465624_2465750_+	hypothetical protein	NA	NA	NA	NA
WP_000333461.1\|2466011_2466620_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_025174343.1\|2466913_2467654_-	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	1.5e-14	29.9

DBSCAN-SWA_198

2473975 : 2475388

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000169224.1\|2473975_2475388_+	6-phospho-beta-galactosidase	A0A0B5JD41	Pandoravirus	3.0e-48	28.9

DBSCAN-SWA_199

2479355 : 2480918

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000792342.1\|2479355_2480918_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	24.6

DBSCAN-SWA_200

2491119 : 2492088

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989083.1\|2491119_2492088_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.3e-15	28.8

DBSCAN-SWA_201

2507975 : 2508884

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167871.1\|2507975_2508884_+	arginase	A0A1V0SJM8	Klosneuvirus	1.4e-27	32.3

DBSCAN-SWA_202

2512474 : 2519971

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_047928587.1\|2512474_2519971_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	3.1e-19	24.9

DBSCAN-SWA_203

2526227 : 2529047

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000334463.1\|2526227_2528033_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1H1Z3	Paramecium_bursaria_Chlorella_virus	5.2e-98	38.8
WP_000908180.1\|2528264_2529047_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.6e-09	32.7

DBSCAN-SWA_204

2540238 : 2544070

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000070866.1\|2540238_2540682_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	5.6e-38	53.7
WP_000160304.1\|2540802_2541513_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_001083325.1\|2541827_2542490_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001242319.1\|2542768_2544070_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	6.1e-133	58.7

DBSCAN-SWA_205

2552010 : 2553621

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159960.1\|2552010_2553621_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.7e-146	49.6

DBSCAN-SWA_206

2561423 : 2569173

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000273356.1\|2561423_2562023_+	thymidine kinase	G3MBK1	Bacillus_virus	6.2e-32	42.9
WP_000460242.1\|2562023_2563100_+	peptide chain release factor 1	NA	NA	NA	NA
WP_000248735.1\|2563086_2563923_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_072362259.1\|2563955_2565053_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	3.6e-41	35.6
WP_000697335.1\|2565049_2565472_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_000654185.1\|2565575_2566100_+	TIGR01440 family protein	NA	NA	NA	NA
WP_000120494.1\|2566126_2567365_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.2e-103	53.0
WP_000048712.1\|2567392_2568022_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_047928577.1\|2568045_2569173_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.8e-27	29.6

DBSCAN-SWA_207

2579577 : 2579973

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000932694.1\|2579577_2579973_+	single-stranded DNA-binding protein	A0A1J0MFK5	Staphylococcus_phage	1.3e-14	38.5

DBSCAN-SWA_208

2586081 : 2586729

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031590210.1\|2586081_2586729_-	HD domain-containing protein	H2ED17	Moumouvirus	8.0e-09	27.0

DBSCAN-SWA_209

2593928 : 2595449

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178942.1\|2593928_2595449_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-58	33.9

DBSCAN-SWA_210

2601120 : 2603148

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000546584.1\|2601120_2603148_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	5.6e-24	23.1

DBSCAN-SWA_211

2608298 : 2611683

Clostridium_botulinum_C_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000621175.1\|2608298_2608661_+	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.2e-07	32.8
WP_000390829.1\|2609010_2610012_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_001052491.1\|2610130_2610457_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_001190829.1\|2610458_2610938_+	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001041102.1\|2610912_2611683_+	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	1.3e-21	34.9

DBSCAN-SWA_212

2625783 : 2630507

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031588337.1\|2625783_2627313_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	5.5e-08	28.1
WP_020978284.1\|2627342_2628362_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000196911.1\|2628483_2628738_-	ACT domain-containing protein	NA	NA	NA	NA
WP_000047810.1\|2628737_2630507_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.3e-63	30.1

DBSCAN-SWA_213

2634267 : 2649043

Moraxella_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159040.1\|2634267_2635293_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.3e-63	40.9
WP_000106313.1\|2635721_2637332_-	MutS family DNA mismatch repair protein	A0A0N9R0S5	Chrysochromulina_ericina_virus	6.2e-18	25.2
WP_000602069.1\|2638286_2640215_-	ABC-F type ribosomal protection protein	A0A2K9L0W2	Tupanvirus	2.4e-53	30.4
WP_001283612.1\|2640467_2641103_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_072414299.1\|2641457_2642486_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_000581077.1\|2642545_2642770_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_001052270.1\|2642977_2644228_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	4.5e-40	31.2
WP_000790330.1\|2644410_2645361_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_000141414.1\|2645509_2646994_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	4.0e-19	25.6
WP_001253314.1\|2646990_2647950_+	carbohydrate kinase	NA	NA	NA	NA
WP_000688498.1\|2648326_2649043_-	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	3.0e-25	32.6

DBSCAN-SWA_214

2656222 : 2671424

Staphylococcus_phage(46.15%)

integrase,capsid

attL 2658182:2658201|attR 2672511:2672530

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917289.1\|2656222_2656507_+	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
WP_000240642.1\|2656582_2658199_+	chaperonin GroEL	A0A240F779	uncultured_virus	3.4e-157	54.7
2658182:2658201	attL	NA	NA	NA	NA
WP_031912621.1\|2658267_2659440_-\|integrase	site-specific integrase	A0A1W6JQD3	Staphylococcus_phage	2.0e-212	94.6
WP_049949256.1\|2659449_2660073_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_160179530.1\|2660205_2660463_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_031912618.1\|2660443_2661085_+	Bro-N domain-containing protein	A0A2H4JB17	uncultured_Caudovirales_phage	1.0e-96	83.6
WP_031912617.1\|2661098_2661416_+	helix-turn-helix domain-containing protein	A0A1W6JQE0	Staphylococcus_phage	2.3e-49	96.2
WP_031912616.1\|2661551_2661776_+	hypothetical protein	A0A1W6JPA6	Staphylococcus_phage	6.8e-16	61.8
WP_001103961.1\|2661776_2662076_+	DUF1474 family protein	Q4ZE75	Staphylococcus_phage	5.9e-31	66.7
WP_064137301.1\|2662167_2664531_+	DNA primase	A0A2H4JCU9	uncultured_Caudovirales_phage	9.4e-148	41.3
WP_001081424.1\|2664951_2665296_+	hypothetical protein	A0A1W6JQD5	Staphylococcus_phage	9.4e-41	65.2
WP_047928558.1\|2665520_2665727_+	hypothetical protein	NA	NA	NA	NA
WP_047928557.1\|2665713_2666772_+\|capsid	phage capsid protein	NA	NA	NA	NA
WP_049949340.1\|2666954_2667443_+	pathogenicity island protein	A0A2H4JB26	uncultured_Caudovirales_phage	9.3e-26	41.8
WP_000801979.1\|2667863_2668832_+	Abi family protein	A0A0H4U080	Erysipelothrix_phage	5.9e-24	27.3
WP_031792985.1\|2669988_2670789_+	staphylococcal enterotoxin type B	A0A097PAT7	Streptococcus_pyogenes_phage	2.3e-53	45.9
WP_001035619.1\|2670866_2671424_-	DUF4888 domain-containing protein	A0A1W6JQE5	Staphylococcus_phage	8.6e-68	74.3
2672511:2672530	attR	NA	NA	NA	NA

DBSCAN-SWA_215

2678380 : 2697474

Staphylococcus_phage(100.0%)

integrase

attL 2681223:2681237|attR 2689613:2689627

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031588767.1\|2678380_2679436_+	bi-component leukocidin LukGH subunit H	A0A2I6PDF3	Staphylococcus_phage	1.3e-35	32.1
WP_160179532.1\|2679457_2680474_+	bi-component leukocidin LukGH subunit G	A0A1X9IGW5	Staphylococcus_phage	8.7e-26	30.6
2681223:2681237	attL	NA	NA	NA	NA
WP_000857176.1\|2681592_2682630_-\|integrase	site-specific integrase	A7TWL3	Staphylococcus_phage	3.4e-179	100.0
WP_000191460.1\|2682737_2683352_+	hypothetical protein	A0A2I6PDE9	Staphylococcus_phage	1.3e-106	100.0
WP_001013104.1\|2683348_2683495_-	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
WP_000694772.1\|2683530_2683713_-	hypothetical protein	A0A2I6PDF8	Staphylococcus_phage	6.9e-27	100.0
WP_001208482.1\|2683912_2684683_-	helix-turn-helix domain-containing protein	A0A1P8L6G7	Staphylococcus_phage	6.2e-141	100.0
WP_000338186.1\|2684841_2685066_+	DUF739 family protein	A7TW90	Staphylococcus_phage	4.5e-36	100.0
WP_000435341.1\|2685083_2685344_+	transcriptional regulator	A7TW91	Staphylococcus_phage	2.7e-40	100.0
WP_000351243.1\|2685367_2685907_-	hypothetical protein	A7TW92	Staphylococcus_phage	1.7e-97	100.0
WP_024928163.1\|2685963_2686716_+	oxidoreductase	G4KNN1	Staphylococcus_phage	3.3e-139	99.2
WP_000939496.1\|2686959_2687100_+	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	1.9e-16	100.0
WP_000275058.1\|2687114_2687747_-	hypothetical protein	A7TW95	Staphylococcus_phage	1.5e-113	100.0
WP_001120197.1\|2687805_2688126_+	DUF771 domain-containing protein	A0A2I6PDH6	Staphylococcus_phage	1.5e-56	100.0
WP_000066020.1\|2688122_2688284_+	DUF1270 domain-containing protein	A0A2I6PDF7	Staphylococcus_phage	1.9e-20	100.0
WP_000291488.1\|2688376_2688637_+	DUF1108 family protein	A0A2I6PDH1	Staphylococcus_phage	2.6e-43	100.0
WP_001205732.1\|2688645_2688909_+	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
WP_000700557.1\|2688917_2690861_+	AAA family ATPase	A0A2I6PDH3	Staphylococcus_phage	0.0e+00	98.0
2689613:2689627	attR	NA	NA	NA	NA
WP_000138475.1\|2690862_2691783_+	recombinase	A0A2I6PDH5	Staphylococcus_phage	2.3e-166	100.0
WP_072399433.1\|2691911_2692481_+	MBL fold metallo-hydrolase	S4SWA4	Staphylococcus_phage	8.4e-87	100.0
WP_000934770.1\|2692481_2692952_+	single-stranded DNA-binding protein	A0A0E3T9H6	Staphylococcus_phage	4.8e-80	99.4
WP_000148301.1\|2692981_2693866_+	DnaD domain protein	S4V6D4	Staphylococcus_phage	3.1e-136	95.9
WP_000338528.1\|2693872_2694091_+	hypothetical protein	A0A1P8L6E4	Staphylococcus_phage	1.4e-37	100.0
WP_000401964.1\|2694099_2694504_+	RusA family crossover junction endodeoxyribonuclease	A0A0E3XBN4	Staphylococcus_phage	1.4e-72	100.0
WP_031929144.1\|2694516_2694888_+	phage protein	A0A2I6PDG3	Staphylococcus_phage	9.8e-52	92.7
WP_001126836.1\|2694888_2695137_+	hypothetical protein	A0A2I6PDI0	Staphylococcus_phage	3.2e-43	100.0
WP_000982708.1\|2695201_2695651_+	hypothetical protein	A0A2I6PDH2	Staphylococcus_phage	9.3e-81	100.0
WP_001105620.1\|2695647_2695932_+	hypothetical protein	A0A2I6PDI3	Staphylococcus_phage	9.4e-47	100.0
WP_000370292.1\|2695924_2696179_+	DUF1024 family protein	A0A2I6PDI5	Staphylococcus_phage	6.5e-39	100.0
WP_000265042.1\|2696298_2696499_+	DUF1514 domain-containing protein	A0A2I6PDJ9	Staphylococcus_phage	1.4e-28	100.0
WP_000590124.1\|2696526_2696943_+	hypothetical protein	G4KNP7	Staphylococcus_phage	3.7e-76	99.3
WP_000988332.1\|2697174_2697474_+	HNH endonuclease	A0A2I6PDH9	Staphylococcus_phage	3.5e-52	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP047807.1|WP_001248939.1|1166128_1167124_-|YvcK-family-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP047807.1|WP_001248939.1|1166128_1167124_-|YvcK-family-protein

1166128_1167124_-

331 aa aa

HTH_WhiA

Identity	Hit_domain_coverage
NA	NA

1163912-1169674

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047807_1	Orphan	1.1\|405569\|28\|NZ_CP047807\|CRISPRCasFinder	405569-405596	28	1168352-1168379	1

1. spacer 1.1|405569|28|NZ_CP047807|CRISPRCasFinder matches to NZ_CP047807 position: 1168352-1168379, mismatch: 1

tcagcttactataatgtgcaagttgggg	CRISPR spacer
tcagcttacgataatgtgcaagttgggg	Protospacer
********* ******************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047807

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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