CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047782	Staphylococcus aureus strain UP_1352 chromosome, complete genome	9 crisprs	csa3,cas3,DEDDh,DinG,WYL	3	0	209	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047782_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_1

513475-513559

Unclear

Consensus_repeat	Method
CACCCCAACTTGCATTGTCTGTAGAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP047782_1

>merge|NZ_CP047782|1|513475-513559|CRISPRCasFinder
CACCCCAACTTGCATTGTCTGTAGAAATTGGGAATCCAATTTCTCTTTGTTGGGGCCCACACCCCAACTTGCATTGCCTGTAGAA

>NZ_CP047782|1|1|513475-513559|CRISPRCasFinder
CACCCCAACTTGCATTGTCTGTAGAA	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCA
CACCCCAACTTGCATTGCCTGTAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_098827697.1\|512188_513299_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP047782.1\|WP_000617735.1\|508356_508929_+\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461
NZ_CP047782.1\|WP_000229253.1\|516232_518218_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP047782.1\|WP_001224791.1\|523412_523898_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP047782.1\|WP_000370984.1\|506546_507629_+\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|226583
NZ_CP047782.1\|WP_001057973.1\|507621_508296_+\|ComF-family-protein	unknown	unknown	gnl\|CDD\|223970
NZ_CP047782.1\|WP_000749385.1\|514067_514907_+\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP047782.1\|WP_001791369.1\|511915_512014_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000638419.1\|515727_515964_+\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_CP047782.1\|WP_000057557.1\|523905_525345_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276808
NZ_CP047782.1\|WP_160199967.1\|525411_526347_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP047782.1\|WP_000506536.1\|509342_511874_+\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP047782.1\|WP_000460983.1\|501924_502995_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP047782.1\|WP_000508984.1\|522562_523405_+\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_CP047782.1\|WP_000538141.1\|515080_515731_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_CP047782.1\|WP_000258151.1\|503312_504368_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_CP047782.1\|WP_000192947.1\|504531_505173_-\|YigZ-family-protein	unknown	unknown	gnl\|CDD\|224653
NZ_CP047782.1\|WP_000662687.1\|518225_521072_+\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP047782.1\|WP_000958224.1\|521624_522557_+\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_CP047782.1\|WP_000686342.1\|505316_506183_+\|DegV-family-protein	unknown	unknown	gnl\|CDD\|273257

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_098827697.1\|512188_513299_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP047782.1\|WP_000617735.1\|508356_508929_+\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	1.13584e-37
NZ_CP047782.1\|WP_000229253.1\|516232_518218_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP047782.1\|WP_001224791.1\|523412_523898_+\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	7.57447e-30
NZ_CP047782.1\|WP_000370984.1\|506546_507629_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|226583	COG4098, comFA, Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein) [DNA replication, recombination, and repair].	1.30855e-179
NZ_CP047782.1\|WP_001057973.1\|507621_508296_+\|ComF-family-protein	gnl\|CDD\|223970	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only].	1.20522e-50
NZ_CP047782.1\|WP_000749385.1\|514067_514907_+\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	3.29354e-42
NZ_CP047782.1\|WP_000662687.1\|518225_521072_+\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP047782.1\|WP_000638419.1\|515727_515964_+\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	4.73465e-34
NZ_CP047782.1\|WP_000057557.1\|523905_525345_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	7.77476e-06
NZ_CP047782.1\|WP_160199967.1\|525411_526347_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	2.3819e-152
NZ_CP047782.1\|WP_000506536.1\|509342_511874_+\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP047782.1\|WP_000460983.1\|501924_502995_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.2404e-45
NZ_CP047782.1\|WP_000508984.1\|522562_523405_+\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	6.12313e-120
NZ_CP047782.1\|WP_000538141.1\|515080_515731_+\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_CP047782.1\|WP_000258151.1\|503312_504368_+\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	2.69988e-87
NZ_CP047782.1\|WP_000192947.1\|504531_505173_-\|YigZ-family-protein	gnl\|CDD\|224653	COG1739, COG1739, Uncharacterized conserved protein [Function unknown].	7.46066e-72
NZ_CP047782.1\|WP_000958224.1\|521624_522557_+\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_CP047782.1\|WP_000686342.1\|505316_506183_+\|DegV-family-protein	gnl\|CDD\|273257	TIGR00762, DegV, EDD domain protein, DegV family. This family of proteins is related to DegV of Bacillus subtilis and includes paralogous sets in several species (B. subtilis, Deinococcus radiodurans, Mycoplasma pneumoniae) that are closer in percent identity to each than to most homologs from other species. This suggests both recent paralogy and diversity of function. DegV itself is encoded immediately downstream of DegU, a transcriptional regulator of degradation, but is itself uncharacterized. Crystallography suggested a lipid-binding site, while comparison of the crystal structure to dihydroxyacetone kinase and to a mannose transporter EIIA domain suggests a conserved domain, EDD, with phosphotransferase activity. [Unknown function, General].	9.17692e-120

>NZ_CP047782.1|WP_098827697.1|512188_513299_+|peptide-chain-release-factor-2
MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD
>NZ_CP047782.1|WP_001791369.1|511915_512014_+|hypothetical-protein
MLWEESFYFTSVKYFKKCEEVVKRCYVLSLKK
>NZ_CP047782.1|WP_000506536.1|509342_511874_+|preprotein-translocase-subunit-SecA
MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKTKQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKSVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKGKDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFGEAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK
>NZ_CP047782.1|WP_000617735.1|508356_508929_+|ribosome-associated-translation-inhibitor-RaiA
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLIQTSEQ
>NZ_CP047782.1|WP_001057973.1|507621_508296_+|ComF-family-protein
MNNCLSCGAKLYENITIYNLFKKPNRLCDRCKENWDNIKLDIKARRCSRCLKYLDQNEAYCLDCKFLSAHFNLMEQLYCQFQYDGLMKEMIHQYKFSKDYYLCELLAHLIEIPQTSYDYIVPIPSSPAHDLSRTFNPVEAVLKAKGIRFDKILKMSNRPKQSHLTKKERLADENPFIIDTELDLNGKEILLVDDIYTTGLTIHRAGCKLYAKNIRKFKVFAFAR
>NZ_CP047782.1|WP_000370984.1|506546_507629_+|DEAD/DEAH-box-helicase
MDNVTRYKITESSQSSSQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSKVEHATIYMTATPPKQLLSEIPLENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINNQRYTLVFFNNIETMIKTFSIYKQKITKLTYVHSEDVFRFEKVEQLRNGQYDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKLECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE
>NZ_CP047782.1|WP_000686342.1|505316_506183_+|DegV-family-protein
MKIAVMTDSTSYLSQDLIDKYNIQIAPLSVTFDDGKNFTESNEIAIEEFYNKMASSQTIPTTSQPAIGEWITKYEMLRDQGYTDIIVICLSSGISGSYQSSYQAGEMVEGVNVHAFDSKLAAMIEGCYVLRAIEMVEEGYEPQQIIDDLTNMREHTGAYLIVDDLKNLQKSGRITGAQAWVGTLLKMKPVLKFEDGKIIPEEKVRTKKRAIQTLEKKVLDIVKDFEEVTLFVINGDHFEDGQALYKKLQDDCPSAYQVAYSEFGPVVAAHLGSGGLGLGYVGRKIRLT
>NZ_CP047782.1|WP_000192947.1|504531_505173_-|YigZ-family-protein
MTQNIITVKKEHIIENVISKSRFIAHIKPVQNEDEAKAFIAAIKKEHKDATHNCSAYTIGPEMNIQKANDDGEPTGTAGVPMLDILKKLDVHNACVVVTRYFGGIKLGGGGLIRAYSGAVRDVIYDIGRVELREAVPCIVTLNYDQTGKFEYELASTHFMLRNQTYTDKVSYYIDVVKSDYEAFINFLNQMTAGNFDLTEETPKQLPFDIPTE
>NZ_CP047782.1|WP_000258151.1|503312_504368_+|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MVTLLLVAVTMIVSLTITPIVIAISKRLNLVDKPNFRKVHTKPISVMGGTVILFSFLIGIWIGHPIETEIKPLIIGAIIMYVLGLVDDIYDLKPYIKLAGQIAAALVVAFYGVTIDFISLPMGTTIHFGFLSIPITVIWIVAITNAINLIDGLDGLASGVSAIGLITIGFIAILQANIFITMICCVLLGSLIGFLFYNFHPAKIFLGDSGALMIGFIIGFLSLLGFKNITIIALFFPIVILAVPFIDTLFAMIRRVKKGQHIMQADKSHLHHKLLALGYTHRQTVLLIYSISILFSLSSIILYVSPPLGVVLMFVLIIFSIELIVEFTGLIDNNYRPILNLISRKSSHKEE
>NZ_CP047782.1|WP_000460983.1|501924_502995_-|GGDEF-domain-containing-protein
MFEAFIYNISVIVAGIYLFHRLQYSENKRMVFSKAYVTVLMTIVSLLLSVYPIPYREDYLIHLTFVPLLFLGRFTNMVYTLSATVIVAIVEIVVFNNSIMYGVTLIVIAAVTSAIGPFLKQNDVLSLLILNVVTIIILFGVALVSPIYTLSEVIILIPISLIITLASAITFVDIWHFFSLVNRYENEDKYDYLTGLGNVKEFDRHLNEISRKAEKEHQSIALLLIDIDGFKDVNDTYSHKSGDAVLKQMSQLLKNYVPNQFKIFRNGGEEFSVVIHNYSLDQSVKLAENIRSGVEKSSFHLPNKEVIKLSVSIGVGYLTDDDPKSQRKVFKDADDMVHVAKNQGRNKVMFNPIINL
>NZ_CP047782.1|WP_000749385.1|514067_514907_+|CHAP-domain-containing-protein
MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKTVKSPVRKASQAKKVVQQPVQQASKKVVVKQAPKQTVAKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH
>NZ_CP047782.1|WP_000538141.1|515080_515731_+|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_CP047782.1|WP_000638419.1|515727_515964_+|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_CP047782.1|WP_000229253.1|516232_518218_+|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_CP047782.1|WP_000662687.1|518225_521072_+|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNINLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_CP047782.1|WP_000958224.1|521624_522557_+|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_CP047782.1|WP_000508984.1|522562_523405_+|prolipoprotein-diacylglyceryl-transferase
MGGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPGEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTRKVK
>NZ_CP047782.1|WP_001224791.1|523412_523898_+|acetyltransferase
MRKFLSKEYHRTNPLWHVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQILNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_CP047782.1|WP_000057557.1|523905_525345_+|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMANQKFKQREYKRAAEYFEKVLELSPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLKEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYHNELFVSENDLMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_CP047782.1|WP_160199967.1|525411_526347_+|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGVVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSAPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA

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Crispr_ID: NZ_CP047782_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_2

573835-573914

Orphan

Consensus_repeat	Method
CCGTCAGCTTCTGTGTTGGGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_2

>merge|NZ_CP047782|2|573835-573914|CRISPRCasFinder
CCGTCAGCTTCTGTGTTGGGGCCCACCCCAACTTGCATTGCTTGTAAGCTGACTTTCCGTCAGCTTCTATGTTGGGGCCC

>NZ_CP047782|2|2|573835-573914|CRISPRCasFinder
CCGTCAGCTTCTGTGTTGGGGCCC	ACCCCAACTTGCATTGCTTGTAAGCTGACTTT
CCGTCAGCTTCTATGTTGGGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_001183862.1\|578893_579745_-\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_CP047782.1\|WP_000255545.1\|567442_568060_-\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198
NZ_CP047782.1\|WP_000520233.1\|576114_576810_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP047782.1\|WP_001798062.1\|572702_573581_+\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|226395
NZ_CP047782.1\|WP_000732338.1\|576827_577649_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP047782.1\|WP_001065804.1\|574550_574847_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP047782.1\|WP_016187137.1\|566809_567370_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP047782.1\|WP_000150036.1\|569678_570395_+\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_CP047782.1\|WP_001018965.1\|574171_574558_+\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_CP047782.1\|WP_001147955.1\|571166_571487_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP047782.1\|WP_000168845.1\|580072_580834_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP047782.1\|WP_000290491.1\|572144_572525_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP047782.1\|WP_000422908.1\|570477_571017_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_CP047782.1\|WP_000752917.1\|578465_578660_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP047782.1\|WP_000974455.1\|569108_569531_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP047782.1\|WP_160199970.1\|575096_576122_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP047782.1\|WP_000589549.1\|571630_571987_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP047782.1\|WP_000807671.1\|582353_583595_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP047782.1\|WP_000205574.1\|580931_582239_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP047782.1\|WP_000569884.1\|568215_568710_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_001183862.1\|578893_579745_-\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	1.10175e-76
NZ_CP047782.1\|WP_000255545.1\|567442_568060_-\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	5.25608e-61
NZ_CP047782.1\|WP_000520233.1\|576114_576810_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.67625e-100
NZ_CP047782.1\|WP_001798062.1\|572702_573581_+\|DUF1963-domain-containing-protein	gnl\|CDD\|226395	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown].	1.81941e-75
NZ_CP047782.1\|WP_000732338.1\|576827_577649_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	5.3847e-113
NZ_CP047782.1\|WP_001065804.1\|574550_574847_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.8621e-13
NZ_CP047782.1\|WP_016187137.1\|566809_567370_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.24579e-44
NZ_CP047782.1\|WP_000150036.1\|569678_570395_+\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	6.29269e-147
NZ_CP047782.1\|WP_001018965.1\|574171_574558_+\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.24029e-35
NZ_CP047782.1\|WP_001147955.1\|571166_571487_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	3.63533e-24
NZ_CP047782.1\|WP_000168845.1\|580072_580834_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.29081e-150
NZ_CP047782.1\|WP_000290491.1\|572144_572525_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	9.01516e-70
NZ_CP047782.1\|WP_000422908.1\|570477_571017_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	2.10032e-49
NZ_CP047782.1\|WP_000752917.1\|578465_578660_+\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	5.95583e-07
NZ_CP047782.1\|WP_000974455.1\|569108_569531_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	1.40241e-61
NZ_CP047782.1\|WP_160199970.1\|575096_576122_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	1.19907e-168
NZ_CP047782.1\|WP_000589549.1\|571630_571987_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.06191e-56
NZ_CP047782.1\|WP_000807671.1\|582353_583595_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP047782.1\|WP_000205574.1\|580931_582239_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	8.69072e-134
NZ_CP047782.1\|WP_000569884.1\|568215_568710_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	2.53639e-47

>NZ_CP047782.1|WP_001798062.1|572702_573581_+|DUF1963-domain-containing-protein
MLNIQDVSHLSKKEQKAYNRFVESVENGNLPVLPCIEMDLKEMQEETLNQSKIGGMPFLKSFKDIPLDENNVPMVLLAQINLNDLPEQQELFPVNEGILQFWISSEDQMYGMSENLKGNNINSRLVYIKEPITDLSLKDIQAHLKSLDADNEDIPFSGAFSIEFRLSKQTITCTDYKYDEDDLALWNKVNPSFALKSMFGGYDELMEPVCNTFTAKEPFNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTDLEAMKFDDYMYSWDCS
>NZ_CP047782.1|WP_000290491.1|572144_572525_+|glycine-cleavage-system-protein-GcvH
MAVPNELKYSKEHEWVKVEGNVATIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQLEALLTAEKYSEMIGE
>NZ_CP047782.1|WP_000589549.1|571630_571987_+|arsenate-reductase-family-protein
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
>NZ_CP047782.1|WP_001147955.1|571166_571487_-|thioredoxin-family-protein
MQAIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
>NZ_CP047782.1|WP_000422908.1|570477_571017_+|nitroreductase
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEEDMPKAPRKNRNLITLY
>NZ_CP047782.1|WP_000150036.1|569678_570395_+|type-I-3-dehydroquinate-dehydratase
MTHVEVVATITPQLYIEETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGEPQAPGQIDVTDLKAQVTLY
>NZ_CP047782.1|WP_000974455.1|569108_569531_-|organic-hydroperoxide-resistance-protein
MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDPDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
>NZ_CP047782.1|WP_000569884.1|568215_568710_-|GNAT-family-N-acetyltransferase
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
>NZ_CP047782.1|WP_000255545.1|567442_568060_-|amino-acid-transporter
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLFIIIAVVGVSIIIMSLPILQAIIYIVGLIFLMYMAWTIWHDKPSTDGEAQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF
>NZ_CP047782.1|WP_016187137.1|566809_567370_+|histidine-phosphatase-family-protein
MRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYYETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGLFEGESVYLFDNLYKPEDLFGDRIVPFKGEARQQVEDRIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKLDEALKHNIGNCNILKFEYDNGTFKFVELIDPNL
>NZ_CP047782.1|WP_001018965.1|574171_574558_+|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSNDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPFLPNINNERLVLVNE
>NZ_CP047782.1|WP_001065804.1|574550_574847_+|thioredoxin-family-protein
MNNSLDIKDVTTFYEEDKHLIYGYTPTCGTCKVSERMLDITNEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFQSVTDLLENLK
>NZ_CP047782.1|WP_160199970.1|575096_576122_+|methionine-ABC-transporter-ATP-binding-protein
MIELKEVVKEYRTKNKEVLAVDHVNLSMRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIILITHEMHVIRRICDEVAVMESGKVIEHGPVTQVFENPQHAVTKRFVKEDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSIDFGKFEKELIERQVKMEVLRHG
>NZ_CP047782.1|WP_000520233.1|576114_576810_+|ABC-transporter-permease
MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
>NZ_CP047782.1|WP_000732338.1|576827_577649_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGLILVLTFAVVLAACGNGSKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGNVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEDAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
>NZ_CP047782.1|WP_000752917.1|578465_578660_+|CsbD-family-protein
MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
>NZ_CP047782.1|WP_001183862.1|578893_579745_-|DUF368-domain-containing-protein
MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMVIAGIAILIVITLMNNSDKHAGETLTLSTGLIIKYFIAGMCASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
>NZ_CP047782.1|WP_000168845.1|580072_580834_+|Fe-S-cluster-assembly-ATPase-SufC
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE
>NZ_CP047782.1|WP_000205574.1|580931_582239_+|Fe-S-cluster-assembly-protein-SufD
MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRRISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK
>NZ_CP047782.1|WP_000807671.1|582353_583595_+|cysteine-desulfurase
MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047782_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_3

967566-967658

Unclear

Consensus_repeat	Method
TAAGAAACAGTAATCAATAAATTGATAACT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP047782_3

>merge|NZ_CP047782|3|967566-967658|CRISPRCasFinder
TAAGAAACAGTAATCAATAAATTGATAACTAATAAGCGGAACGCCTGAGCTAAAGCTCATGCATAAGAAACAGTAATCAATAAATTGATAACT

>NZ_CP047782|3|3|967566-967658|CRISPRCasFinder
TAAGAAACAGTAATCAATAAATTGATAACT	AATAAGCGGAACGCCTGAGCTAAAGCTCATGCA
TAAGAAACAGTAATCAATAAATTGATAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_000262717.1\|968974_972541_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP047782.1\|WP_000547905.1\|958091_958733_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|224480
NZ_CP047782.1\|WP_000623906.1\|960133_961780_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|224378
NZ_CP047782.1\|WP_001548538.1\|964232_964805_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP047782.1\|WP_000164332.1\|957440_958085_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_CP047782.1\|WP_160199977.1\|961969_964030_+\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP047782.1\|WP_001261987.1\|976400_976904_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP047782.1\|WP_000531319.1\|973777_974110_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP047782.1\|WP_000007675.1\|972540_973791_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP047782.1\|WP_000171418.1\|959744_960119_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP047782.1\|WP_000863474.1\|974135_975503_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP047782.1\|WP_000239746.1\|964809_965796_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP047782.1\|WP_000687323.1\|976903_977641_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP047782.1\|WP_000426914.1\|967747_967981_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP047782.1\|WP_000181404.1\|977743_978094_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP047782.1\|WP_000047355.1\|965788_966715_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP047782.1\|WP_000043237.1\|968096_968828_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP047782.1\|WP_000517908.1\|959113_959302_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP047782.1\|WP_000167269.1\|966707_967442_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP047782.1\|WP_000268754.1\|975937_976213_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_000262717.1\|968974_972541_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP047782.1\|WP_000547905.1\|958091_958733_+\|thiamine-diphosphokinase	gnl\|CDD\|224480	COG1564, THI80, Thiamine pyrophosphokinase [Coenzyme metabolism].	1.16343e-81
NZ_CP047782.1\|WP_000623906.1\|960133_961780_+\|DAK2-domain-containing-protein	gnl\|CDD\|224378	COG1461, COG1461, Predicted kinase related to dihydroxyacetone kinase [General function prediction only].	0
NZ_CP047782.1\|WP_001548538.1\|964232_964805_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	2.37773e-98
NZ_CP047782.1\|WP_000164332.1\|957440_958085_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	1.52718e-114
NZ_CP047782.1\|WP_160199977.1\|961969_964030_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP047782.1\|WP_001261987.1\|976400_976904_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.02289e-68
NZ_CP047782.1\|WP_000531319.1\|973777_974110_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	1.00966e-46
NZ_CP047782.1\|WP_000007675.1\|972540_973791_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP047782.1\|WP_000171418.1\|959744_960119_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	4.1554e-37
NZ_CP047782.1\|WP_000863474.1\|974135_975503_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP047782.1\|WP_000239746.1\|964809_965796_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	7.80762e-178
NZ_CP047782.1\|WP_000687323.1\|976903_977641_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	3.27017e-164
NZ_CP047782.1\|WP_000426914.1\|967747_967981_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	5.23888e-31
NZ_CP047782.1\|WP_000181404.1\|977743_978094_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	6.77895e-70
NZ_CP047782.1\|WP_000047355.1\|965788_966715_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	6.35101e-134
NZ_CP047782.1\|WP_000043237.1\|968096_968828_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	4.78039e-115
NZ_CP047782.1\|WP_000517908.1\|959113_959302_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_CP047782.1\|WP_000167269.1\|966707_967442_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	3.68137e-140
NZ_CP047782.1\|WP_000268754.1\|975937_976213_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	3.01687e-41

>NZ_CP047782.1|WP_000167269.1|966707_967442_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP047782.1|WP_000047355.1|965788_966715_+|ACP-S-malonyltransferase
MSKTAIIFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFPSGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEKGKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEVIKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLEDVKGWNEND
>NZ_CP047782.1|WP_000239746.1|964809_965796_+|phosphate-acyltransferase-PlsX
MVKLAIDMMGGDNAPDIVLEAVQKAVEDFKDLEIILFGDEKKYNLNHERIEFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTIDGKGFVFLDVGANADAKPEHLLQYAQLGDIYAQKIRGIDNPKISLLNIGTEPAKGNSLTKKSYELLNQDHSLNFVGNIEAKTLMDGDTDVVVTDGYTGNMVLKNLEGTAKSIGKMLKDTIMSSTKNKIAGAILKKDLAEFAKKMDYSEYGGSVLLGLEGTVVKAHGSSNAKAFYSAIRQAKIAGEQNIVQTMKETVGESNE
>NZ_CP047782.1|WP_001548538.1|964232_964805_+|transcription-factor-FapR
MRGETLKLKKDKRREAIRQQIDSNPFITDHELSDLFQVSIQTIRLDRTYLNIPELRKRIKLVAEKNYDQISSIEEQEFIGDLIQVNPNVKAQSILDITSDSVFHKTGIARGHVLFAQANSLCVALIKQPTVLTHESSIQFIEKVKLNDTVRAEARVVNQTAKHYYVEVKSYVKHTLVFKGNFKMFYDKRG
>NZ_CP047782.1|WP_160199977.1|961969_964030_+|ATP-dependent-DNA-helicase-RecG
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIFFNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFLNSQGTQTQENADVQLEPVYRIKEGIKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTLNTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKSSDEAIEIDYDLDQVKSFIDRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIALFGDSMNVALLTGSVKGKKRKILLEQLENRTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVNQRQLLRGKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITTWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANLVEDYRMLEVARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD
>NZ_CP047782.1|WP_000623906.1|960133_961780_+|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTMTSGREEVENNLSKNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIESESEINSKLLAESFQAGVETAYKAVMKPVEGTILTVAKDAAQAAIEKANNTEDCIELMEYIIVKANESLENTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKALKGEKVEAKVAKLDKDEFVHDEHDFHGVINTEDIIYGYCTEMMVRFGKNKKAFDEQEFRQDMSQFGDSLLVINDEEIVKVHVHTEYPGKVFNYGQQYGELIKLKVENMREQHREVIRKEQHTAKPKMETVETAIITISMGEGISEIFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNILMASEQAASIVDAEAVVIPTKSIPQGISALFQYDVDATLEENKAQMADSVNNVKSGSLTYAVRDTKIDGVEIKKDAFMGLIEDKIVSSQSDQLTTVTELLNEMLADDSEILTVIIGQDAEQAVTDNMINWIEEQYPDVEVEVHEGGQPIYQYFFSVE
>NZ_CP047782.1|WP_000171418.1|959744_960119_+|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNEVIASVVGGKAVECYGIVGMASRQQVRDGIAEILGHENYAKGIKVTENNGVVDIDMYIIVSYGVKISEVANNVQSTVKYTLEKSLNVSVNSINIYVQGVRVNNTGKKA
>NZ_CP047782.1|WP_000517908.1|959113_959302_-|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNRRSHALNSTKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_CP047782.1|WP_000547905.1|958091_958733_+|thiamine-diphosphokinase
MHINLLCSDRHLPQDIWAKSNEGKWGGVDRGALILLKHQIIPFFSVGDFDSVSKEERQLLTEQLQIKPVQAEKADTDLALAVDKAVALGFDSITIYGATGGRLDHFFGAIQLLLKKAYYKHDVHIEVIDQQNKIELLPKGQHTVEKDKSYPYISFIPMTDDVELSLAGFKYNLARQMLNIGSTLTISNEIESLQAKVTVHDGLILQIRSTDLN
>NZ_CP047782.1|WP_000164332.1|957440_958085_+|ribulose-phosphate-3-epimerase
MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
>NZ_CP047782.1|WP_000426914.1|967747_967981_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINSLEK
>NZ_CP047782.1|WP_000043237.1|968096_968828_+|ribonuclease-III
MSKQKKSEIVNRFRKRFDTKMTELGFTYQNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPNLPEGNLTKMRATIVCEPSLVIFANKIGLNEMILLGKGEEKTGGRTRPSLISDAFEAFIGALYLDQGLDIVWKFAEKVIFPHVEQNELLGVVDFKTQFQEYVHQQNKGDVTYNLIKEEGPAHHRLFTSEVILQGEAIAEGKGKTKKESEQRAAESAYKQLKQIK
>NZ_CP047782.1|WP_000262717.1|968974_972541_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADQTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGSKMEDIIFSGAEHRKAQNYAEVQLRLDNHSKKLSVDENEVIVTRRLYRSGESEYYINNDRARLKDIADLFLDSGLGKEAYSIISQGRVDEILNAKPIDRRQIIEESAGVLKYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKTLSHQMKHSDIVVTVNDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGKRHQLDNDVESLNYQLVKATEAFEKYTGQLNVLVERKKNQSETNARYEEEQENLIELLENISSEISEAQDTYKSLKSKQKELNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSEQSDVNNDIRFLKHTIEENEVKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELSAVDKEIKNIEKDLTDTKKAQNEYEEKLYQAYRYTEKMKTRIDSLATQEEEYTYFFNGVKHILKAKNKELKGIHGAVAEIIDVPSKLTQAIETALGASLQHVIVDSEKDGRQAIQFLKERNLGRATFLPLNVIQSRAVATDIKSIAKEANGFISIASEAVKVAPEYQNIIGNLLGNTIIVDHLKHANELARAIKYRTRIVTLEGDIVNPGGSMTGGGARKSKSILSQKDELTTMRHQLEDYLRQTESFEQQFKELKIKSDQLSELYFEKSQKHNTLKEQVHHFEMELDRLTTQETQIKNDHEEFEFEKNDGYTSDKSRQTLSEKETHLESIKASLKRLEDEIERYTKLSKEGKESLTKTQQTLHQKQSDLAVVKERIKTQQQTIDRLNNQSQQTKHQLNDVKEKIAFFNSDEVMGEQAFQNIKDQINGQQETRTRLSDELDKLKQQRIELNEQIDAQEATLQVCHQDILAIENHYQDIKAEQSKLDVLIHHAIDHLNDEYQLTVERAKSEYTSDESIDALRKKVKLMKMSIDELGPVNLNAIEQFEELNERYTFLSEQRTDLRKAKETLEQIISEMDQEVTERFKETFHAIQGHFTAMFKQLFGGGDAELQLTEADYLTAGIDIVVQPPGKKLQHLSLLSGGERALTAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAKYLNELSDETQFIVITHRKGTMEFADRLYGVTMQESGVTKLVSVNLNTIDDVLKEEQ
>NZ_CP047782.1|WP_000007675.1|972540_973791_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFATNKENDEVKSLTEEQGQDKLEDTHSEGSTQDVNDLAENAEVKKKPRKLSEADFDDDGLISIEDFEEIEAQKMGAKFKAGLEKSRQNFQEQLNNLISRYRKVDEDFFEALEEMLITADVGFNTVMTLTEELRMEAQRRNIQDTEDLREVIVEKIVEIYHQEDDNSEAMNLEDGRLNVILMVGVNGVGKTTTIGKLAYRYKMEGKKVMLAAGDTFRAGAIDQLKVWGERVGVDVISQSEGSDPAAVMYDAINAAKNKGVDILICDTAGRLQNKTNLMQELEKVKRVINRAVPDAPHEALLCLDATTGQNALSQARNFKEVTNVTGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEQLDDLQPFNPESYVYGLFADMIEQNEEITTVENDQIVTEEKDDNHGAK
>NZ_CP047782.1|WP_000531319.1|973777_974110_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIRRTGDLVEDYEKKLELYQKFEQRREIYDEMKKHLSNPEQIQRYIQQLEDLE
>NZ_CP047782.1|WP_000863474.1|974135_975503_+|signal-recognition-particle-protein
MAFEGLSERLQATMQKMRGKGKLTEADIKIMMREVRLALLEADVNFKVVKEFIKTVSERALGSDVMQSLTPGQQVIKIVQDELTKLMGGENTSINMSNKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAADIYRPAAINQLQTVGKQIDIPVYSEGDQVKPQQIVTNALKHAKEEHLDFVIIDTAGRLHIDEALMNELKEVKDIAKPNEIMLVVDSMTGQDAVNVAESFDDQLDVTGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSEKQIDHIKAIIQSMTPAERNNPDTLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKGKRNQMQNMLKGMNLPF
>NZ_CP047782.1|WP_000268754.1|975937_976213_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQIGTYNPTSANAPEIKVDEALALKWLNDGAKPTDTVHNILSKEGIMKKFDEQKKAK
>NZ_CP047782.1|WP_001261987.1|976400_976904_+|ribosome-maturation-factor-RimM
MRVEVGQIVNTHGIKGEIKVKSNSDFTDVRFQPGQVLTVVHNNNDLEYTVKSHRVHKGLHMLTFEGINNINDIEHLKGSSIYQERDHEDIVLEENEFYYSDIIGCTVFDDQETPIGRVINIFETGANDVWVIKGSKEYLIPYIADVVKEVDVENKKIIITPMEGLLD
>NZ_CP047782.1|WP_000687323.1|976903_977641_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFDGVLNHSIMKRAQENNKLQINTVNFRDYAINKHNQVDDYPYGGGQGMVLKPEPVFNAMEDLDVTEQARVILMCPQGEPFSHQKAVELSKADHIVFICGHYEGYDERIRTHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEQSHQDDSFSDGLLEFPQYTRPREFKGLTVPDVLLSGNHANIDAWRHEQKLIRTYNKRPDLIEKYPLTNADKQILERYKIGLKKG
>NZ_CP047782.1|WP_000181404.1|977743_978094_+|50S-ribosomal-protein-L19
MTNHKLIEAVTKSQLRTDLPSFRPGDTLRVHVRIIEGTRERIQVFEGVVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR

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Crispr_ID: NZ_CP047782_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_4

1692257-1692384

Orphan

Consensus_repeat	Method
AATTATGGAGCGGAAGATAGGATTTACACCTATACCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_4

>merge|NZ_CP047782|4|1692257-1692384|CRISPRCasFinder
AATTATGGAGCGGAAGATAGGATTTACACCTATACCTCATTCCAGGAAGGAATGTATTCTAAGAGTTGAAATACTCCCGCATTATTATTAAATTATGGAGCGGAAGATAGGATTTGCACCTATACCTC

>NZ_CP047782|4|4|1692257-1692384|CRISPRCasFinder
AATTATGGAGCGGAAGATAGGATTTACACCTATACCTC	ATTCCAGGAAGGAATGTATTCTAAGAGTTGAAATACTCCCGCATTATTATTA
AATTATGGAGCGGAAGATAGGATTTGCACCTATACCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_001144055.1\|1688100_1688829_-\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP047782.1\|WP_000869463.1\|1700964_1701915_-\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240632
NZ_CP047782.1\|WP_001251219.1\|1685589_1686189_-\|glucosamine-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|223440
NZ_CP047782.1\|WP_000110011.1\|1700421_1700868_-\|peroxide-responsive-transcriptional-repressor-PerR	unknown	unknown	gnl\|CDD\|223806
NZ_CP047782.1\|WP_000939530.1\|1701920_1702376_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224146
NZ_CP047782.1\|WP_000251252.1\|1707350_1707893_-\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219
NZ_CP047782.1\|WP_000063551.1\|1690531_1691593_-\|PTS-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226167
NZ_CP047782.1\|WP_001236371.1\|1704038_1705133_+\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP047782.1\|WP_000031108.1\|1685412_1685565_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000181394.1\|1686347_1686818_-\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	unknown	unknown	gnl\|CDD\|223297
NZ_CP047782.1\|WP_160200001.1\|1688815_1690273_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223836
NZ_CP047782.1\|WP_000901019.1\|1684416_1684812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000886472.1\|1710622_1711459_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224596
NZ_CP047782.1\|WP_001011603.1\|1702456_1703746_+\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP047782.1\|WP_000669380.1\|1681558_1682380_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_CP047782.1\|WP_000379091.1\|1709384_1710362_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP047782.1\|WP_000597238.1\|1705323_1707060_-\|SAV1866-family-putative-multidrug-efflux-ABC-transporter	unknown	unknown	gnl\|CDD\|224055
NZ_CP047782.1\|WP_001793998.1\|1686822_1687965_-\|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl\|CDD\|272993
NZ_CP047782.1\|WP_000116227.1\|1682835_1684221_-\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP047782.1\|WP_000284755.1\|1708195_1709233_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_001144055.1\|1688100_1688829_-\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.22702e-152
NZ_CP047782.1\|WP_001251219.1\|1685589_1686189_-\|glucosamine-6-phosphate-isomerase	gnl\|CDD\|223440	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism].	9.77274e-11
NZ_CP047782.1\|WP_000110011.1\|1700421_1700868_-\|peroxide-responsive-transcriptional-repressor-PerR	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.09298e-56
NZ_CP047782.1\|WP_000939530.1\|1701920_1702376_-\|peroxiredoxin	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	1.5916e-68
NZ_CP047782.1\|WP_000251252.1\|1707350_1707893_-\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	1.0244e-125
NZ_CP047782.1\|WP_000063551.1\|1690531_1691593_-\|PTS-transporter-subunit-IIC	gnl\|CDD\|226167	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only].	1.65132e-122
NZ_CP047782.1\|WP_001236371.1\|1704038_1705133_+\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	1.5476e-86
NZ_CP047782.1\|WP_000869463.1\|1700964_1701915_-\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|240632	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family. Phosphoglycerate Dehydrogenase (PGDH) catalyzes the NAD-dependent conversion of 3-phosphoglycerate into 3-phosphohydroxypyruvate, which is the first step in serine biosynthesis. Over-expression of PGDH has been implicated as supporting proliferation of certain breast cancers, while PGDH deficiency is linked to defects in mammalian central nervous system development. PGDH is a member of the 2-hydroxyacid dehydrogenase family, enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	8.45391e-136
NZ_CP047782.1\|WP_000181394.1\|1686347_1686818_-\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	gnl\|CDD\|223297	COG0219, CspR, Predicted rRNA methylase (SpoU class) [Translation, ribosomal structure and biogenesis].	1.70324e-88
NZ_CP047782.1\|WP_160200001.1\|1688815_1690273_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.35287e-97
NZ_CP047782.1\|WP_000886472.1\|1710622_1711459_-\|hypothetical-protein	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	0.000164936
NZ_CP047782.1\|WP_001011603.1\|1702456_1703746_+\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP047782.1\|WP_000669380.1\|1681558_1682380_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	3.57209e-78
NZ_CP047782.1\|WP_000379091.1\|1709384_1710362_+\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	1.21408e-39
NZ_CP047782.1\|WP_000597238.1\|1705323_1707060_-\|SAV1866-family-putative-multidrug-efflux-ABC-transporter	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP047782.1\|WP_001793998.1\|1686822_1687965_-\|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl\|CDD\|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	1.304e-179
NZ_CP047782.1\|WP_000116227.1\|1682835_1684221_-\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP047782.1\|WP_000284755.1\|1708195_1709233_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	4.67816e-157

>NZ_CP047782.1|WP_000063551.1|1690531_1691593_-|PTS-transporter-subunit-IIC
MSNAKNADNKQFFSKILNSIGAGVVIALVPNALLGEVLKIFKSGNEILELTYQLVILIQSFMAFIIGVLAAHQFKFNGAGAAIVGTSAMIGSGAVVYSNNSFMLKGIGDIINTSLVVIIACLIYMVLQNKLGSFELIILPVLVPIVSGGIGLITLPYIRKITQAIGNVIHSFTDLNPLLMSILISVAFSLLMVTPISLVAIATAISLNGLGSGAANLGIVAACVTFLFGSLRVNSIGVNAVLLIGAAKMMIPVYLKNLIISIPLTINGIITGIIAYVLQVKGTPLSAGFGYTGLVGPINAFNRMSGDPTMNIILLALGYFVIPFVSAFIVHELCKKFIPIYSNDIYKFEVPKQ
>NZ_CP047782.1|WP_160200001.1|1688815_1690273_-|ABC-transporter-permease-subunit
MKCLIRFILVLGLLISSAMVYINPAAYAEQDQKWEKIKERGELRVGLSADYAPMEFEHTVNGKTEYAGVDIDLAKKIAKDNNLKLKIVNMSFDSLLGALKTGKIDIIISGMTSTPERKKQVDFSDSYMMTKNIMLVKKDKVNDYKDIKDFNNKKVGAQKGTEQEKIAQTEIENASITSLSRLPDVILALKSGKVEGVVVEKPVAEAYLKQNPKLGISNVKFNEEEKDTVIAVPKDSPKLLSQINKTIKEVKDKGLIDKYMTNAANAMNDDSGFISKYGSFFLKGIKITILISLIGVALGSILGAFVALMKLSKIKIISWIASIYIEILRGTPMLVQVFIVFFGITAALGLDISALVCGTIALVINSSAYIAEIIRAGINAVDKGQMEAARSLGLNYRQTMKSVIMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDRFTPLLVAAALYFVLTFVLTRIMNMIEGRLNASD
>NZ_CP047782.1|WP_001144055.1|1688100_1688829_-|amino-acid-ABC-transporter-ATP-binding-protein
MPVIKINNLNKVFGDNEVLKDINLEINQGEVVAIIGPSGSGKSTLLRCMNLLEVPTKGQVIFEGNDLTEKGTQVDKLRQKMGMVFQNFNLFPHKKVVDNIILAPKLLKKDNNDELHKEALSLLDKVGLKEKADVYPNQLSGGQKQRVAIARALAMHPDVILFDEPTSALDPEVVGDVLKVMKDLAKEGMTMVVVTHEMGFAKDVSDKVIFMADGVVVESGTPVEIFEQPQHERTQNFLARVL
>NZ_CP047782.1|WP_001793998.1|1686822_1687965_-|tRNA-epoxyqueuosine(34)-reductase-QueG
MGGIRLDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE
>NZ_CP047782.1|WP_000181394.1|1686347_1686818_-|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL
MTNHIVLYQPEIPANTGNIARTCAGTNTHLHLIKPLGFRTDDKMLKRAGLDYWEFVNITYHDSIEAFFEATNGEYYLLTKFGKKTYSDFDFSNHDKDFYFIFGKETTGLPDWVKEKYQDTALRIPMSEHIRSLNLSNTAALLIYEALRQQDFPGLN
>NZ_CP047782.1|WP_001251219.1|1685589_1686189_-|glucosamine-6-phosphate-isomerase
MAMNFKVFDNSQLVAEYAADIIRKQFNNNPTTIAGFHLDTDQAPVLDELKKNIEKHAVDFSQINILDYDDKKSYFEALGVPAGQVYPIAYEKDAIELIADKIKTKENKGKLTLQVVSIDEQGKLNVSIRQGLMEAREIFLVVTGANKRDVVEKLYQENGKTSFEPADLKAHRMVNVILDKEAAAGLPEDVKAYFTSRFA
>NZ_CP047782.1|WP_000031108.1|1685412_1685565_-|hypothetical-protein
MSKDKDPKLNYHEEENSMVTDFEDLKELGKEMEQISDQNDQEKNSEEDSQ
>NZ_CP047782.1|WP_000901019.1|1684416_1684812_-|hypothetical-protein
MLGKYWIQLLIATVIISLISIKAFPLAIGALYLPIIFKVIKLQLNLSKGLIDDVNAQTFIKSNQSGIVISVICCLLITGILYYTLDGFYASLTGVLGTLVALNPYTTIVSAVLYILTAIATVEATKTKYRN
>NZ_CP047782.1|WP_000116227.1|1682835_1684221_-|class-II-fumarate-hydratase
MSVRIEHDTFGEIEVPADKYWGAQTERSKRNFPVGKERMPIEVVYGFAQLKRAAALANFDLGKLSEAKKDAIVYACDQILSGELDEHFPLVVWQTGSGTQSNMNVNEVVSYVANMYLKDHHSDESIHPNDDVNKSQSSNDTFPTAMHVALYQEVETKLEPALKLLRNTLKEKEDKFDSIIKIGRTHLQDATPIKLGQEISGWRYMLDRCETMLSESKKHILNLAIGGTAVGTGINAHPEFGDKVAQYISENTGYPFVSSENKFHALTAHDEVVQLHGTLKALAGDLMKIANDVRWLASGPRAGLAEISIPENEPGSSIMPGKVNPTQCEMLTMVAVQVMGNDTVVGFASSQGNFELNVYKPVIMHNTLQSIYLLADGMETFNNNCAVGIEPIEENIDNYLNQSLMLVTALNPHIGYEKAAQIAKKAHKEGLTLKESAIQTGYVTEEQFEAWIKPEDMVDPH
>NZ_CP047782.1|WP_000669380.1|1681558_1682380_+|RluA-family-pseudouridine-synthase
MKFKIPENFNDLSLRDIFQQLKVPKKDLHHLNMSKDITINDKPARLMDKVHTGDDVFVPTIDEKSNYVPSYRYAQIKYEDDDMAIVMKPKGVKTHPNDLKESNTLMNHVIYTVDSDYVEPIHRLDQETVGLLIVAKNPLMKKILDRMLEDNDITRIYKANVKALLPLKPQTIDMPIGKDKFHSNKRRVSPTGQRAITHILTSKMIKETVCQLEIKLDTGRTHQIRVHLAEIGHPVIGDPLYGDSTLRQLELESYKIEFVHPLTKEVISVSLDD
>NZ_CP047782.1|WP_000110011.1|1700421_1700868_-|peroxide-responsive-transcriptional-repressor-PerR
MSVEIESIEHELEESIASLRQAGVRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK
>NZ_CP047782.1|WP_000869463.1|1700964_1701915_-|2-hydroxyacid-dehydrogenase
MKVVGLNRMREVETELQQRFSDVDFKFYKKASEIPESDLANLDILVGYDGGINEAFLRRCPNLKWIAWFATGVNTLPLDYIADHGILLTNGKGVQAKQLSEYILAFILDDYKKMKLSYDNQRQHIYDSKITGKRLSGQTVLFLGTGAIATRTAKLAKAFNMNLIGLSKSGQNKDEFDEIYTIESLESTLPNADIVINALPETQETIHLLKKKHFELMKDEALFINIGRGSIVKEALLIEVLKSRVIRHAYLDVFENEPLKPNHELYELDNVTITAHITGNDYEAKYDLLDIFKNNLVNFLNKNGLIENEVDAKKGY
>NZ_CP047782.1|WP_000939530.1|1701920_1702376_-|peroxiredoxin
MLQKGEQFPIFKLENQDGTVITNDTLKGKKAIVYFYPRDNTPTCTTEACDFRDNLEMFNDLDVAVYGISGDSKKKHQNFIEKYGLNFDLLVDEDFKLAKETGVYQLKKSFGKESMGIVRTTFIIDEQGKVLDVIEKVKVKTQIEELKNILG
>NZ_CP047782.1|WP_001011603.1|1702456_1703746_+|glutamate-1-semialdehyde-2,1-aminomutase
MNFSESERLQQLSNEYILGGVNSPSRSYKAVGGGAPVVMKEGHGAYLYDVDGNKFIDYLQAYGPIITGHAHPHITKAIQEQAAKGVLFGTPTELEIEFSKKLRDAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPESVAREVITVPFNDINAYKEAIEFWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNEISHSNGTLVIYDEVITAFRFHYGAAQDLLGVIPDLTAFGKIVGGGLPIGGYGGRQDIMEQVAPLGPAYQAGTMAGNPLSMKAGIALLEVLEQDGVYEKLDSLGQQLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKVTHYDQVEHSDGEAFGKFFKLMLNQGINLAPSKFEAWFLTTEHTEEDIKQTLKAADYAFSQMK
>NZ_CP047782.1|WP_001236371.1|1704038_1705133_+|aromatic-acid-exporter-family-protein
MRLGARIFKTGIAIILAMSIASLLPDDVGLKALAGVSAVVAMQPSIYRSFKTVSDQALGNIIGAILSVTMVTIFSDNFIIMGVTVIVLIAILFKFNLAHVATLASVTALIIMGQHTGSFYITAFYRFVLVMIGVISSSLVNFVFLPPKFETKIYYNSLNISSDIFMWFKLVLNDTTEFNNIKQDSHNLKQRVEKLEKIYDYYSEERPITKKHIHQQNRKKILFREVVQTTRQAYEVLNKLSRYQNDLYLLNNNFLLQIKLDLDSLTAFHEQILASLSKKARYNVTHVDYELDNPQKKDLLSTFQHELINHPYQTEYSFANVMQIVAAIEEYRHHLEHLDRIRISFFTYHRSDADIEIVEEDFDL
>NZ_CP047782.1|WP_000597238.1|1705323_1707060_-|SAV1866-family-putative-multidrug-efflux-ABC-transporter
MIKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL
>NZ_CP047782.1|WP_000251252.1|1707350_1707893_-|DUF402-domain-containing-protein
MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKDRYKKIRQY
>NZ_CP047782.1|WP_000284755.1|1708195_1709233_-|A/G-specific-adenine-glycosylase
MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVIDYYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVHDKYEGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLNDDYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELGALICTPKNPLCLFCPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRSEKLLHGMWQFPMFKSEHARREMTEKIGHDIQPVETPIFELKHQFTHLTWKIKVYAVSGTINIERLPDDMIWFDLSDRDQYTFPVPMSKIYQFING
>NZ_CP047782.1|WP_000379091.1|1709384_1710362_+|metal-dependent-hydrolase
MDTATHIAIGVGLTALATQDPAMASTFGATATTLIVGSLIPDGDTVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFTFFSGTHPFHVWMWAQLAVFLHVFVDIFNSYGTQALRPITNKWIQLSVINTFDPIIFTVLCIGIVLWVVGLHPLAVFFPIIALLIIYYMIRFKMRAVIKQQALKAIQQEHHPVKVFVAPTIKFMEWRVAIQTDAHDYVGKAYGRNVVFSDKVERQKLSTDSILWKVKGNKDIRTFLNFSSIYRWQTTTLADGSTEIRLIDLRYLKNDHYSFVAIAHVTKDNVIDHSYIGWVFTEDKLQRKLYAK
>NZ_CP047782.1|WP_000886472.1|1710622_1711459_-|hypothetical-protein
MLDNIILYFKNLPHTKRYVTERLKQSWKSFLIVLAACLILIIASETLFSFSHLTDVKEVRWLFRLIALIVFAVLMFTIYISYHHYMNDFLVTKLFNISAATPVVIMSILSFIMLVILTMISALVKPVNFETSYIALFYFIVMATIFVGLISVTFGLIRLLTEKINIIFYGICVLCFLVLPIIFIPNPNHVFINHILMLNPMYYIVNGIAQSIIFGISSMENIPYHFYFILFLCLIAAVNFVLARYTTHAIYNKTSKVTQTDNQQDVSKDSTDEADTSS

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Crispr_ID: NZ_CP047782_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_5

1781394-1781475

Orphan

Consensus_repeat	Method
CCAACTTACATTGTCTGTAGAATTTC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP047782_5

>merge|NZ_CP047782|5|1781394-1781475|CRISPRCasFinder
CCAACTTACATTGTCTGTAGAATTTCTTTTCAAAATTCTCTATGTTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAATTTC

>NZ_CP047782|5|5|1781394-1781475|CRISPRCasFinder
CCAACTTACATTGTCTGTAGAATTTC	TTTTCAAAATTCTCTATGTTTGGGGCCCCG
CCAACTTGCATTGTCTGTAGAATTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_000613738.1\|1776261_1776816_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834
NZ_CP047782.1\|WP_000027924.1\|1783493_1784951_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP047782.1\|WP_001790257.1\|1772836_1772947_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001147874.1\|1778899_1780261_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP047782.1\|WP_160200010.1\|1787249_1788449_-\|CamS-family-sex-pheromone-protein	unknown	unknown	gnl\|CDD\|227188
NZ_CP047782.1\|WP_000545373.1\|1782053_1783481_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP047782.1\|WP_000272063.1\|1792657_1793350_-\|heptaprenylglyceryl-phosphate-synthase	unknown	unknown	gnl\|CDD\|224560
NZ_CP047782.1\|WP_001790679.1\|1775952_1776045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001165363.1\|1793532_1793835_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226893
NZ_CP047782.1\|WP_001791535.1\|1781868_1782015_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001250339.1\|1773765_1775079_-\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP047782.1\|WP_000544973.1\|1773032_1773764_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP047782.1\|WP_000774552.1\|1788461_1790465_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP047782.1\|WP_000949466.1\|1775370_1775871_+\|H-type-ferritin-FtnA	unknown	unknown	gnl\|CDD\|224445
NZ_CP047782.1\|WP_000140179.1\|1776882_1777953_-\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP047782.1\|WP_000548777.1\|1778199_1778730_-\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP047782.1\|WP_001231458.1\|1780341_1781289_-\|diacylglycerol-kinase	unknown	unknown	gnl\|CDD\|183982
NZ_CP047782.1\|WP_000992924.1\|1790468_1792661_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_CP047782.1\|WP_000957023.1\|1785622_1787161_+\|sodium/proline-symporter-PutP	unknown	unknown	gnl\|CDD\|273981
NZ_CP047782.1\|WP_000170162.1\|1784952_1785255_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_000613738.1\|1776261_1776816_+\|3'-5'-exonuclease	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	4.39188e-75
NZ_CP047782.1\|WP_001147874.1\|1778899_1780261_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	0
NZ_CP047782.1\|WP_160200010.1\|1787249_1788449_-\|CamS-family-sex-pheromone-protein	gnl\|CDD\|227188	COG4851, CamS, Protein involved in sex pheromone biosynthesis [General function prediction only].	0
NZ_CP047782.1\|WP_000545373.1\|1782053_1783481_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP047782.1\|WP_000272063.1\|1792657_1793350_-\|heptaprenylglyceryl-phosphate-synthase	gnl\|CDD\|224560	COG1646, COG1646, Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only].	2.53994e-99
NZ_CP047782.1\|WP_001165363.1\|1793532_1793835_-\|hypothetical-protein	gnl\|CDD\|226893	COG4496, COG4496, Uncharacterized protein conserved in bacteria [Function unknown].	1.66593e-59
NZ_CP047782.1\|WP_000027924.1\|1783493_1784951_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP047782.1\|WP_001250339.1\|1773765_1775079_-\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	3.60835e-98
NZ_CP047782.1\|WP_000544973.1\|1773032_1773764_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	1.79354e-120
NZ_CP047782.1\|WP_000774552.1\|1788461_1790465_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP047782.1\|WP_000949466.1\|1775370_1775871_+\|H-type-ferritin-FtnA	gnl\|CDD\|224445	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism].	1.15329e-74
NZ_CP047782.1\|WP_000140179.1\|1776882_1777953_-\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP047782.1\|WP_000548777.1\|1778199_1778730_-\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	1.54005e-11
NZ_CP047782.1\|WP_001231458.1\|1780341_1781289_-\|diacylglycerol-kinase	gnl\|CDD\|183982	PRK13337, PRK13337, putative lipid kinase; Reviewed.	0
NZ_CP047782.1\|WP_000992924.1\|1790468_1792661_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047782.1\|WP_000957023.1\|1785622_1787161_+\|sodium/proline-symporter-PutP	gnl\|CDD\|273981	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter. This family consists of the sodium/proline symporter (proline permease) from a number of Gram-negative and Gram-positive bacteria and from the archaeal genus Methanosarcina. Using the related pantothenate permease as an outgroup, candidate sequences from Bifidobacterium longum and several from archaea are found to be outside the clade defined by known proline permeases. These sequences, scoring between 570 and -40, define the range between trusted and noise cutoff scores. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP047782.1\|WP_000170162.1\|1784952_1785255_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	5.296e-34

>NZ_CP047782.1|WP_001231458.1|1780341_1781289_-|diacylglycerol-kinase
MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQVSYETPSKLKSIVGPFAYYIKGFEMLPQMKAVDLRIEYDGNVFQGEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDVFAPNDIVNEELINNDHVDDNLIEE
>NZ_CP047782.1|WP_001147874.1|1778899_1780261_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MQAIAKNDIKTGTVVDLTHEGHGVVKIDRFPIFIPQALINEQIEYKIIKVKKNFAIGKLLNINTRSENRVAPPCIYYERCGGCQLQHLSYEAQLEMKKEQVINLFQRKAHFDNSKINDTVGMTDPWRYRNKSQIPVGKNEQNEVIMGFYRQRSHDIIDMGSCLIQDSQHQEVMNEVKSILKDLNVSIYQEQLKKGLMRHLVVRTGYHTDEMMVIFVTNGKNWPQKNAVVEKILDAFPNVTSIKQNINDSHSNVIMGRQSITLYGKDTIIDQLTDSTFKISDQSFYQINSEQTEKLYNKAIEYAQLTGNEVVLDTYCGIGTIGLYMAPHAKHVYGVEVVPSAIEDAQQNATINQCNNTTFVCGKAEEVILQWKAQGIKPDVVMVDPPRKGCDETFIQTLLTLEPKRIVYISCNPSTQQRDALLLAEKYQLEEVTPVDMFPQTTHVETVALFNLK
>NZ_CP047782.1|WP_000548777.1|1778199_1778730_-|DUF3267-domain-containing-protein
MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSAGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
>NZ_CP047782.1|WP_000140179.1|1776882_1777953_-|DNA-polymerase-IV
MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPMSLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFLAKLASGMNKPDGMTVIDYRNVHDILMTLDIGDFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFGKRGRGLYNKARGIDHSEVKSTRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERLNKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRLIGVTVGNLEQSTYKNMTIYDFI
>NZ_CP047782.1|WP_000613738.1|1776261_1776816_+|3'-5'-exonuclease
MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNPQDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQNIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITFRLLKNYENLTYVTNIYGKNLKDKG
>NZ_CP047782.1|WP_001790679.1|1775952_1776045_-|hypothetical-protein
MTKNTIISLENEKTQINDSENESSDLRKAK
>NZ_CP047782.1|WP_000949466.1|1775370_1775871_+|H-type-ferritin-FtnA
MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFIQQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSEIARQDKDYATISFLNWFLDEQVEEEAMFETHINYLTRIGDDSNALYLYEKELGTRTFDEE
>NZ_CP047782.1|WP_001250339.1|1773765_1775079_-|Mur-ligase-family-protein
MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLAEQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKTKIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKLLLNGDDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQIGHYHCQCGFKREQAKYEISRFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYTVLRELGLNEQAIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEKVYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPIIVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS
>NZ_CP047782.1|WP_000544973.1|1773032_1773764_-|type-1-glutamine-amidotransferase
MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDFYTESKTNRLTGDIVIESDTFGTIVGFENHGGRTYHNFGTLGHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEKQAKQVLIDRANRQKKSR
>NZ_CP047782.1|WP_001790257.1|1772836_1772947_-|hypothetical-protein
MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT
>NZ_CP047782.1|WP_001791535.1|1781868_1782015_-|hypothetical-protein
MVADLDAIEGLFISIEVILLLTLFIVHVNGKNINFINALALIILRQTV
>NZ_CP047782.1|WP_000545373.1|1782053_1783481_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLSGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDGTMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNNEQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKR
>NZ_CP047782.1|WP_000027924.1|1783493_1784951_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSIRYESVENLLTLIKDKKIKPSDVVKDIYDAIEETDPTIKSFLALDKENAIKKAQELDELQAKDQMDGKLFGIPMGIKDNIITNGLETTCASKMLEGFVPIYESTVMEKLHNENAVLIGKLNMDEFAMGGSTETSYFKKTVNPFDHKAVPGGSSGGSAAAVAAGLVPFSLGSDTGGSIRQPAAYCGVVGMKPTYGRVSRFGLVAFASSLDQIGPLTRNVKDNAIVLEAISGADANDSTSAPVDDVDFTSEIGKDIKGLKVALPKEYLGEGVADDVKEAVQNAVETLKSLGAVVEEVSLPNTKFGIPSYYVIASSEASSNLSRFDGIRYGYHSKEAHSLEELYKMSRSEGFGKEVKRRIFLGTFALSSGYYDAYYKKSQKVRTLIKNDFDKVFENYDVVVGPTAPTTAFNLGEEIDDPLTMYANDLLTTPVNLAGLPGISVPCGQSNGRPIGLQFIGKPFDEKTLYRVAYQYETQYNLHDVYEKL
>NZ_CP047782.1|WP_000170162.1|1784952_1785255_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
>NZ_CP047782.1|WP_000957023.1|1785622_1787161_+|sodium/proline-symporter-PutP
MLTMGTALSQQVDANWQTYIMIAVYFLILIVIGFYGYKQATGNLSEYMLGGRSIGPYITALSAGASDMSGWMIMGLPGSVYSTGLSAMWITIGLTLGAYINYFVVAPRLRVYTELAGDAITLPDFFKNRLNDKNNVLKIISGLIIVVFFTLYTHSGFVSGGKLFESAFGLDYHFGLILVAFIVIFYTFFGGYLAVSITDFFQGVIMLIAMVMVPIVAMMNLNGWGTFHDVAAMKPTNLNLFKGLSFIGIISLFSWGLGYFGQPHIIVRFMSIKSHKMLPKARRLGISWMAVGLLGAVAVGLTGIAFVPAYHIKLEDPETLFIVMSQVLFHPLVGGFLLAAILAAIMSTISSQLLVTSSSLTEDFYKLVRGEEKAKTHQKEFVMVGRLSVLAVAIVAIAIAWNPNDTILNLVGNAWAGFGASFSPLVLFALYWKGLTRAGAVSGMVSGALVVIVWIAWIKPLAHINEIFGLYEIIPGFIVSVIVTYVVSKLTKKPGAFVETDLNKVRDIVREK
>NZ_CP047782.1|WP_160200010.1|1787249_1788449_-|CamS-family-sex-pheromone-protein
MKRTLVLLITAIFILAACGNHKDDQAGKDNQKHNNSSNQVKEIATDKNVQGDNYRTLLPFKESQARGLLQDNMANSYNGGDFEDGLLNLSKEVFPTDKYLYQDGQFLDKKTINAYLNPKYTKREIDKMSEKDKKDKKANENLGLNPSHEGETDPEKIAEKSPAYLSNILEQDFYGGGDTKGKNIKGMTIGLAMNSVYYYKKEKDGPTFSKKLDDREVKKQGKQMASEILSRLRENDDLKDIPIHFAIYKQSSEDSITPGEFITQATAEKSQTKLNEWHNINEKSALLPSSTAADYDENLNNNFKQFNDNLQSYFSNFTQAVGKVKFVDKKPQRLVVDLPIDYYGQAETIGITQYVTEQANKYFDKIDNYEIRIKDGNQPRALISKTKDDKEPQVHIYSN
>NZ_CP047782.1|WP_000774552.1|1788461_1790465_-|NAD-dependent-DNA-ligase-LigA
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHPEFKTVDSPTVRVGGEAQASFNKVNHDTPMLSLGNAFNEDDLRKFDQRIREQIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIHAIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGSLRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNRARVSDIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSPRWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRASLHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTHCPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKIIQQLYQSELIKDVADIFYLTEEDLLPLDRMGQKKVDNLLAAIQQAKDNSLENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVEIHDIGDKVAQSVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTGKLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGIEIWTEQQFVDKQNELNS
>NZ_CP047782.1|WP_000992924.1|1790468_1792661_-|DNA-helicase-PcrA
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED
>NZ_CP047782.1|WP_000272063.1|1792657_1793350_-|heptaprenylglyceryl-phosphate-synthase
MYDIKKWRHIFKLDPAKHISDDDLDAICMSQTDAIMIGGTDDVTEDNVIHLMSRVRRYPLPLVLEISNIESVMPGFDFYFVPTVLNSTDVAFHNGTLLEALKTYGHSIDFEEVIFEGYVVCNADSKVAKHTKANTDLTTEDLEAYAQMVNHLYRLPVMYIEYSGIYGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMAAIADTIIVGDIIYKDIKKALKTVKIKESSK
>NZ_CP047782.1|WP_001165363.1|1793532_1793835_-|hypothetical-protein
MQIEKLRGAALDELFDAILTLENREECYQFFDDLCTVNEIQSLSQRLQVAKMIKQGYTYATIEQESGASTATISRVKRSLQWGNDAYTMILDRMNIETNE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047782_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_6

1848169-1848257

Orphan

Consensus_repeat	Method
GTTTTTGACTGACTTCTCAATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_6

>merge|NZ_CP047782|6|1848169-1848257|CRISPRCasFinder
GTTTTTGACTGACTTCTCAATCAATTTATAACTTTATTATACATAATCGTTTTTCTTTTGCAATAGTTTTTCGACTGACTTCTCAATCA

>NZ_CP047782|6|6|1848169-1848257|CRISPRCasFinder
GTTTTTGACTGACTTCTCAATCA	ATTTATAACTTTATTATACATAATCGTTTTTCTTTTGCAATAG
TTTTTCGACTGACTTCTCAATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_001105709.1\|1857326_1857890_+\|accessory-gene-regulator-AgrB	unknown	unknown	gnl\|CDD\|214819
NZ_CP047782.1\|WP_000197638.1\|1852403_1853147_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP047782.1\|WP_000708433.1\|1847458_1847614_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001190608.1\|1841705_1842047_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000620857.1\|1848323_1848998_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379188
NZ_CP047782.1\|WP_000356937.1\|1843220_1843601_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001103930.1\|1846567_1846885_-\|DUF1474-family-protein	unknown	unknown	gnl\|CDD\|369323
NZ_CP047782.1\|WP_001019766.1\|1842582_1843224_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374630
NZ_CP047782.1\|WP_001002721.1\|1845634_1846504_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214926
NZ_CP047782.1\|WP_000917289.1\|1851944_1852229_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP047782.1\|WP_000153640.1\|1847932_1848151_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197775
NZ_CP047782.1\|WP_001549197.1\|1856956_1857091_-\|delta-lysin-family-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|173213
NZ_CP047782.1\|WP_000403839.1\|1846885_1847269_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000867948.1\|1855569_1856355_+\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
NZ_CP047782.1\|WP_000120330.1\|1853171_1854386_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236768
NZ_CP047782.1\|WP_000179345.1\|1849011_1850184_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP047782.1\|WP_000240651.1\|1850252_1851869_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP047782.1\|WP_001231378.1\|1847270_1847474_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000481967.1\|1847610_1847928_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP047782.1\|WP_000522388.1\|1854582_1855209_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|226090

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_001105709.1\|1857326_1857890_+\|accessory-gene-regulator-AgrB	gnl\|CDD\|214819	smart00793, AgrB, Accessory gene regulator B. The accessory gene regulator (agr) of Staphylococcus aureus is the central regulatory system that controls the gene expression for a large set of virulence factors. The arg locus consists of two transcripts: RNAII and RNAIII. RNAII encodes four genes (agrA, B, C, and D) whose gene products assemble a quorum sensing system. At low cell density, the agr genes are continuously expressed at basal levels. A signal molecule, autoinducing peptide (AIP), produced and secreted by the bacteria, accumulates outside of the cells. When the cell density increases and the AIP concentration reaches a threshold, it activates the agr response, i.e. activation of secreted protein gene expression and subsequent repression of cell wall-associated protein genes. AgrB and AgrD are essential for the production of the autoinducing peptide which functions as a signal for quorum sensing. AgrB is a transmembrane protein. AgrB is involved in the proteolytic processing of AgrD and may have both proteolytic enzyme activity and a transporter facilitating the export of the processed AgrD peptide.	1.06502e-53
NZ_CP047782.1\|WP_000197638.1\|1852403_1853147_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	1.80796e-11
NZ_CP047782.1\|WP_000867948.1\|1855569_1856355_+\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	2.32273e-126
NZ_CP047782.1\|WP_000620857.1\|1848323_1848998_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|379188	pfam13443, HTH_26, Cro/C1-type HTH DNA-binding domain. This is a helix-turn-helix domain that probably binds to DNA.	1.58614e-10
NZ_CP047782.1\|WP_001103930.1\|1846567_1846885_-\|DUF1474-family-protein	gnl\|CDD\|369323	pfam07342, DUF1474, Protein of unknown function (DUF1474). This family consists of several bacterial proteins of around 100 residues in length. Members of this family seem to be found exclusively in Staphylococcus aureus. The function of this family is unknown.	2.13556e-19
NZ_CP047782.1\|WP_001019766.1\|1842582_1843224_-\|hypothetical-protein	gnl\|CDD\|374630	pfam16560, SAPI, Putative mobile pathogenicity island. SAPI is a family of putative Gram-positive mobile pathogenicity island proteins. SAPIs are responsible for many superantigen-related diseases in humans as they carry two or more superantigens.	2.52046e-113
NZ_CP047782.1\|WP_001002721.1\|1845634_1846504_-\|hypothetical-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	2.61429e-15
NZ_CP047782.1\|WP_000917289.1\|1851944_1852229_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	5.94304e-45
NZ_CP047782.1\|WP_000153640.1\|1847932_1848151_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	9.85461e-11
NZ_CP047782.1\|WP_001549197.1\|1856956_1857091_-\|delta-lysin-family-phenol-soluble-modulin	gnl\|CDD\|173213	PRK14752, PRK14752, delta-lysin family phenol-soluble modulin.	8.25732e-15
NZ_CP047782.1\|WP_000179345.1\|1849011_1850184_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	5.10093e-47
NZ_CP047782.1\|WP_000120330.1\|1853171_1854386_-\|hypothetical-protein	gnl\|CDD\|236768	PRK10819, PRK10819, transport protein TonB; Provisional.	9.81296e-11
NZ_CP047782.1\|WP_000240651.1\|1850252_1851869_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP047782.1\|WP_000481967.1\|1847610_1847928_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	5.89089e-17
NZ_CP047782.1\|WP_000522388.1\|1854582_1855209_+\|nitroreductase-family-protein	gnl\|CDD\|226090	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only].	7.96692e-115

>NZ_CP047782.1|WP_000153640.1|1847932_1848151_-|helix-turn-helix-transcriptional-regulator
MTILANTRKFKEAMFLKGFNLSDLSRETGVGISYLSQIINGKKIPSPKLAKKMAEVLQVEVNELFEFEVKEA
>NZ_CP047782.1|WP_000481967.1|1847610_1847928_-|helix-turn-helix-domain-containing-protein
MFNINIDEDEARELLEQAINARVDELAKEKYFMTYKELSNYLNLSKPTIEELLINNGMKYYMVGSTYRFKKSDVDEFMEQLTAHMNIQNNDFKQVNIKKLLEARQ
>NZ_CP047782.1|WP_000708433.1|1847458_1847614_-|hypothetical-protein
MKIYLTYICLVSLLTILLLAISNMYVAFSVYAWLITLGCNLTGEITTCENK
>NZ_CP047782.1|WP_001231378.1|1847270_1847474_-|hypothetical-protein
MRKQVIITKTVVGWYNIKDTQHNLMLNIPPKVFEQYFPDVSKDVQVVCLEMDLSKITEIKNKKKVGS
>NZ_CP047782.1|WP_000403839.1|1846885_1847269_-|hypothetical-protein
MEIKQKYQLSKVVKILEVVLYEEDKFQSDKDYHYQDKALYEYALKLVHNGLFNILAELDFEDEAFLILDEVTMTLSDVMKETQHVYRYSVIDEKGEHKHTTDRKGHVIGMLEWALDYIAGNIEVEEL
>NZ_CP047782.1|WP_001103930.1|1846567_1846885_-|DUF1474-family-protein
MNWEIKDLMCDIEAVKEKINDVAIKHAWFVEDRFVKNELETKREHINFSASYLEHRIQNEHTVELLHVYLKEFGELIQKFHEIEKASSENFGEVSDDAQKLKITE
>NZ_CP047782.1|WP_001002721.1|1845634_1846504_-|hypothetical-protein
MNEIKLEYDTHVSVVHYESLDSRSFNSFSKINWSKLVNKLSVPIEANYKYARGVAVYGDIKNGANDQGEIIKKHRNDKNVIYRDVIVLDYDEINDLKQLHEAISSALSNVAWFWHTSYSHRTEQARIRLYIPLNERISADDYRKYTKVLANKIGHKVDEGSYQPSRCFALPVIQKGHIFIKRVNDCPIMNVDMLEQWSKEFEQSNASPNVIGYTRRDSEYWRELCFGTTEGNRNNALASLIGHLLRCHVNDYIVYSFALLWGQFACKPPMKEQEINATFQSILNKHYNN
>NZ_CP047782.1|WP_000356937.1|1843220_1843601_-|hypothetical-protein
MDKEQLKKYIYDYVKEYKEIPIYQLEDLFKEMNHDYIGRTSVTHDKDENIVFWSGWNKITMFALIELVKSEQLDLVYRGSFVMRYLLDGRVPNLPLAICYPEDGQQTDVPSWVPMVLRINKEEKIK
>NZ_CP047782.1|WP_001019766.1|1842582_1843224_-|hypothetical-protein
MNIETIVNQFETRAGTLLRYYTGLLEHSKVQPCCFKLYNDPFDMAYVMMNGKLFGHVYIKDCKVRQSFELASPKHTEGLIRSIEGHYVGYELHDGKQLSISDMMASQLFEDEYFMYGLQTYAESNNSDVFEYLENGFDTDTLEGIQSSNTDVIANIEMLYQLATGINEPAPELVEGLRLVTEFVQDENATQEDYKALEHKLTELKSSYYSLNK
>NZ_CP047782.1|WP_001190608.1|1841705_1842047_-|hypothetical-protein
MQSIAEKETYHLPTEHLQVFNVIKNTSNKYITKTKILNQLGYEYNSSNERWLRRVINSLVYDYGYPIGCSYKPSERGYYIIMTEQEKQQAMRSIKKLADGSMKRYEALKRIKV
>NZ_CP047782.1|WP_000620857.1|1848323_1848998_+|helix-turn-helix-transcriptional-regulator
MIRNRLSELLSERGLKISRVAKDVKIARSSLTSMAQNDSEMIRYDAIDKLCSYLHISPSEFFEHNPINFDFTFDEEPNYKINDVFEGFEVTANITHAFSIENFDFEILVDVELDNRQKLNFDLDVSYKETEKITNSQHRFIFTIKNEDENIGLKKYVDSLSAGLKNLLFKKINQKLSGYVSEIIVKNIDDIEELFPNKGEKSTTLHKEILQTDSRLSSDIFKEY
>NZ_CP047782.1|WP_000179345.1|1849011_1850184_+|site-specific-integrase
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQLRNGDYIAPSTSTFKQVADDWISQYANEVKVSSVRAREKAINHAIERFNNKPIQTINKHEYQRFVNDISAQYSKNYVDSIIASTNMIFKYAYDMKLIRIMPSEGIKRPKKKISVEELEDTEIHKKFLEKDELFQFLEVAKNHHSPQNSFEVFCTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQFQILTPKTESSIGKISVDPHVIKLLKNYKTDVQDTWKNELYVDNNFVFTDVNGYPLVIKKLQLWIKAILKKTDITNKQISTHSFRHTHCALLIEAGVHIKEIQERLRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF
>NZ_CP047782.1|WP_000240651.1|1850252_1851869_-|chaperonin-GroEL
MVKQLKFSEDARQAMLRGVDQLANAVKVTIGPKGRNVVLDKEFTAPLITNDGVTIAKEIELEDPYENMGAKLVQEVANKTNEIAGDGTTTATVLAQAMIQEGLKNVTSGANPVGLRQGIDKAVKVAVEALHENSQKVENKNEIAQVGAISAADEEIGRYISEAMEKVGNDGVITIEESNGLNTELEVVEGMQFDRGYQSPYMVTDSDKMVAELERPYILVTDKKISSFQDILPLLEQVVQSNRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLDLKDATIDMLGTASKVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIEAEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNMLEVGIVDPTKVTRSALQHAASVAAMFLTTEAVVASIPEKNNDQPNMGGMPGMM
>NZ_CP047782.1|WP_000917289.1|1851944_1852229_-|co-chaperone-GroES
MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTPEVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE
>NZ_CP047782.1|WP_000197638.1|1852403_1853147_+|CPBP-family-intramembrane-metalloprotease
MTRLWASLLTVIIYILSQFLPLLIVKKLPFVQYSGIELTKAVIYIQLVLFLIAATTIILINLKIKNPTKLELEVKEPKKYIIPWALLGFALVMIYQMVVSIVYTQIFGTQQTSPNTERLIVIARKIPLFIFFVSIVGPLLEEYVFRKVIFGELFNAIKGNRIVAFAIATTVSSLIFALAHNDYKFIPIYFGMGVIFSLAYVWTKRLAVPIIIHMLQNGFVVIFQLLNPEALKKATEQANFIYHIFIP
>NZ_CP047782.1|WP_000120330.1|1853171_1854386_-|hypothetical-protein
MSYHWFKKMLLSTSMLILSSSSSLGLATHTVEAKDNLNGEKPTTNLNHNVTSPSVNSEMNNNETGTPHESNQAGNEGTGSNSRDANPDSNNVKPDSNNQNPSPDSKPDPNNPNPGPNPKPDPDKPKPNPEPKPDPDKPKPNPDPKPDPDKPKPNPDPKPDPNPNPNPKPDPNKPNPNPSPNPNQPGDSNQSGGSKNGGTWNPNASDGSNQGQWQPNGNQGNSQNPTGNDFVSQRFLALANGAYKYNPYILNQINQLGKEYGEVTDEDIYNIIRKQNFSGNAYLNGLQQQSNYFRFQYFNPLKSERYYRNLDEQVLALITGEIGSMPDLKKPEDKPDSKQRSFEPHEKDDFTVVKKQEDNKKSASTAYSKSWLAIVCSMMVVFSIMLFLFVKRNKKKNKNESQRR
>NZ_CP047782.1|WP_000522388.1|1854582_1855209_+|nitroreductase-family-protein
MGLFKKDKKAMTFDNAMEERRSIYNLKDSISISDDELESMIAHAVKHVPSSFNSQSTRIVLLLNDNNNKFWDNTKAILKEVMGENRDFEPTEQKIDNFKHSYGTILFYENQDVVSGLQEQMPNYYDNFAIWSTQTNAMHQFAIWTALATKGIGASLQHYNPLVDEMTSNEFNIPKSWKLIAQMPFGDIREAAGEKTFNPVEDRFVIKK
>NZ_CP047782.1|WP_000867948.1|1855569_1856355_+|carbon-nitrogen-family-hydrolase
MKVQIYQLPIIFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGKLINEYDKVHLVPMLREHEFLTAGENVAEPFQLSDGTYVTQLICYDLRFPELLRYPARSGAKIAFYVAQWPMSRLQHWHSLLKARAIENNMFVIGTNSTGFDGNTEYAGHSIVINPNGDLVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK
>NZ_CP047782.1|WP_001549197.1|1856956_1857091_-|delta-lysin-family-phenol-soluble-modulin
MSCLILRIFILIKEGVISMAQDIISTIGDLVKWIIDTVNKFTKK
>NZ_CP047782.1|WP_001105709.1|1857326_1857890_+|accessory-gene-regulator-AgrB
MNYFDNKIDQFATYLQKRNNLDHIQFLQVRLGMQVLAKNIGKLIVMYTLAYILNIFIFTLITNISFYLIRRYAHGAHAPSSFWCYIESITLFIVLPLLVLHFHINETLMMFLALLSVGVVIKYAPAATKKKPIPARLVKQKRYFSIIISTILFIITLFVKEPYTQFIQLGIIIQAITLLPIYYSKED

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Crispr_ID: NZ_CP047782_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_7

2059166-2059291

Orphan

Consensus_repeat	Method
CCTCTTTACTCGAAAGCTCACAAAACTCTTGATATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_7

>merge|NZ_CP047782|7|2059166-2059291|CRISPRCasFinder
CCTCTTTACTCGAAAGCTCACAAAACTCTTGATATCACTGGTTTCTCATGATTTTTTAATGTTTTTATTTTGAGTTACTCGAAAATTTTCCTCTTTACTCGAAAGCTCACAAAACCCTTGATATCA

>NZ_CP047782|7|7|2059166-2059291|CRISPRCasFinder
CCTCTTTACTCGAAAGCTCACAAAACTCTTGATATCA	CTGGTTTCTCATGATTTTTTAATGTTTTTATTTTGAGTTACTCGAAAATTTT
CCTCTTTACTCGAAAGCTCACAAAACCCTTGATATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_000586768.1\|2063826_2064687_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|184205
NZ_CP047782.1\|WP_000044369.1\|2053287_2054103_-\|hydrolase	unknown	unknown	gnl\|CDD\|319792
NZ_CP047782.1\|WP_000569649.1\|2068073_2069018_-\|DNA-directed-RNA-polymerase-subunit-alpha	unknown	unknown	gnl\|CDD\|235359
NZ_CP047782.1\|WP_001791582.1\|2049572_2049740_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001250038.1\|2061545_2061983_-\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP047782.1\|WP_000130145.1\|2055954_2057619_-\|acetolactate-synthase-AlsS	unknown	unknown	gnl\|CDD\|236312
NZ_CP047782.1\|WP_001221836.1\|2062231_2063026_-\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP047782.1\|WP_000389651.1\|2064683_2065493_-\|energy-coupling-factor-transporter-ATPase	unknown	unknown	gnl\|CDD\|184207
NZ_CP047782.1\|WP_000222271.1\|2049736_2052163_+\|polysaccharide-lyase-8-family-protein	unknown	unknown	gnl\|CDD\|238517
NZ_CP047782.1\|WP_000179061.1\|2055213_2055918_-\|acetolactate-decarboxylase	unknown	unknown	gnl\|CDD\|226058
NZ_CP047782.1\|WP_000791607.1\|2063030_2063837_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP047782.1\|WP_001791584.1\|2058088_2058271_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_001044451.1\|2052222_2053077_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP047782.1\|WP_000850000.1\|2048913_2049330_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP047782.1\|WP_000204271.1\|2059348_2060785_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225420
NZ_CP047782.1\|WP_000542274.1\|2067688_2068057_-\|50S-ribosomal-protein-L17	unknown	unknown	gnl\|CDD\|235522
NZ_CP047782.1\|WP_000136272.1\|2058920_2059100_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236623
NZ_CP047782.1\|WP_000170975.1\|2061133_2061532_-\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP047782.1\|WP_094409958.1\|2065868_2067436_+\|IS3-like-element-ISSau2-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP047782.1\|WP_000769709.1\|2054397_2054823_+\|MAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|367591

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_000586768.1\|2063826_2064687_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|184205	PRK13646, cbiO, energy-coupling factor transporter ATPase.	0
NZ_CP047782.1\|WP_000044369.1\|2053287_2054103_-\|hydrolase	gnl\|CDD\|319792	cd02605, HAD_SPP, sucrose-phosphatase, similar to Synechocystis sp PCC 6803 SPP. Sucrose-phosphatase (SPP; EC 3.1.3.24) catalyzes the dephosphorylation of sucrose-6(F)-phosphate (Suc6P)-the final step in the pathway of sucrose biosynthesis in plants and cyanobacteria. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.06188e-100
NZ_CP047782.1\|WP_000569649.1\|2068073_2069018_-\|DNA-directed-RNA-polymerase-subunit-alpha	gnl\|CDD\|235359	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional.	1.89947e-175
NZ_CP047782.1\|WP_000130145.1\|2055954_2057619_-\|acetolactate-synthase-AlsS	gnl\|CDD\|236312	PRK08617, PRK08617, acetolactate synthase AlsS.	0
NZ_CP047782.1\|WP_001221836.1\|2062231_2063026_-\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	1.21958e-120
NZ_CP047782.1\|WP_000389651.1\|2064683_2065493_-\|energy-coupling-factor-transporter-ATPase	gnl\|CDD\|184207	PRK13648, cbiO, cobalt transporter ATP-binding subunit; Provisional.	0
NZ_CP047782.1\|WP_000222271.1\|2049736_2052163_+\|polysaccharide-lyase-8-family-protein	gnl\|CDD\|238517	cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase.	0
NZ_CP047782.1\|WP_000179061.1\|2055213_2055918_-\|acetolactate-decarboxylase	gnl\|CDD\|226058	COG3527, AlsD, Alpha-acetolactate decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism].	1.39507e-119
NZ_CP047782.1\|WP_000791607.1\|2063030_2063837_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	2.81787e-49
NZ_CP047782.1\|WP_001044451.1\|2052222_2053077_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.20929e-22
NZ_CP047782.1\|WP_001250038.1\|2061545_2061983_-\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	4.91074e-100
NZ_CP047782.1\|WP_000850000.1\|2048913_2049330_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.51415e-41
NZ_CP047782.1\|WP_000204271.1\|2059348_2060785_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	3.62307e-63
NZ_CP047782.1\|WP_000542274.1\|2067688_2068057_-\|50S-ribosomal-protein-L17	gnl\|CDD\|235522	PRK05591, rplQ, 50S ribosomal protein L17; Validated.	2.70058e-62
NZ_CP047782.1\|WP_000136272.1\|2058920_2059100_-\|hypothetical-protein	gnl\|CDD\|236623	PRK09775, PRK09775, type II toxin-antitoxin system HipA family toxin YjjJ.	0.0004492
NZ_CP047782.1\|WP_000170975.1\|2061133_2061532_-\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	2.2295e-82
NZ_CP047782.1\|WP_094409958.1\|2065868_2067436_+\|IS3-like-element-ISSau2-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.59839e-44
NZ_CP047782.1\|WP_000769709.1\|2054397_2054823_+\|MAP-domain-containing-protein	gnl\|CDD\|367591	pfam03642, MAP, MAP domain. This presumed 110 amino acid residue domain is found in multiple copies in MAP (MHC class II analogue protein). The protein has been found in a wide range of extracellular matrix proteins.	8.17372e-34

>NZ_CP047782.1|WP_000136272.1|2058920_2059100_-|hypothetical-protein
MTEIVEFLSDGKLASRLEIQETMGLQKSYTSELIAELKKLEIIGSEGRGPGTRYYLIRD
>NZ_CP047782.1|WP_001791584.1|2058088_2058271_-|hypothetical-protein
MIDSVFWKKAFIPVYFIVAMLVFLLFRFYIKTNNFSIYLMIIFLMCLGTASIIYNYKNNR
>NZ_CP047782.1|WP_000130145.1|2055954_2057619_-|acetolactate-synthase-AlsS
MTDKKYTAADMVIDTLKNNGVEYVFGIPGAKIDYLFNALIDDGPELIVTRHEQNAAMMAQGIGRLTGKPGVVLVTSGPGVSNLTTGLLTATSEGDPVLALGGQVKRNDLLRLTHQSIDNAALLKYSSKYSEEVQDPESLSEVMTNAIRIATSGKNGASFISIPQDVISSPVESKAISLCQKPNLGVPSEQDINDVIEAIKNASFPVLLAGMRSSSADETNAIRKLVERTNLPVVETFQGAGVISRELENHFFGRVGLFRNQVGDELLRKSDLVVTIGYDPIEYEASNWNKELETQIINIDEVQAEITNYMQPKKELIGNIAKTIEMISEKVDEPFINQQHLDELEQLRTHIDEETGIKATHEEGILHPVEIIESMQKVLTDDTTVTVDVGSHYIWMARNFRSYNPRHLLFSNGMQTLGVALPWAISAALVRPNTQVVSVAGDGGFLFSSQDLETAVRKNLNIIQLIWNDGKYNMVEFQEEMKYKRSSGVDFGPVDFVKYAESFGAKGLRVTNQEELEAAIKEGYETDGPVLIDIPVNYKDNIKLSTNMLPDVFN
>NZ_CP047782.1|WP_000179061.1|2055213_2055918_-|acetolactate-decarboxylase
MASVLYQHGTLGTLMAGLLKGTASINELLQHGDLGIATLTGSNGEVIFLDGKAYHANEHKEFVELKGDELTPYATVTKFVADTSYETKDKSSEAVFAEIKEKMLSENLFSAVKISGLFKKMHVRMMPAQEPPYTRLIDSARRQPEQTETYVKGAVVGFFTPELFHGIGSAGFHVHFANDDRNFGGHVLDFEVEDVKVEIQNIETFEQHFPIQDEDFINANIDYKDIADEIREAE
>NZ_CP047782.1|WP_000769709.1|2054397_2054823_+|MAP-domain-containing-protein
MKLKSFVTATLALGLLSTVGAALPSHEASADSNNGYKEMTMDGYHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNQLASQRGVTTEKINNAQTATYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK
>NZ_CP047782.1|WP_000044369.1|2053287_2054103_-|hydrolase
MSKRLLLFDFDETYFKHNTNEEDLSHLREMEKLLEKLTNNNEVITVVLTGSTFQSVMDKMDQVNMTFKPLHIFSDLSSKMFTWNNGEYVESETYKKKVLSEPFLFEDIEDILHHISAQYNVEFIPQRAFEGNETHYNFYFHSTGNHNNDRRILEVLVRYANDQNYTARFSRSNPLAGDPENAYDIDFTPSNAGKLYATQFLMKKYNIPVKSILGFGDSGNDEAYLSYLEHAYLMSNSRDEALKQKFRLTKYPYYQGITLHVKEFVEGKYDY
>NZ_CP047782.1|WP_001044451.1|2052222_2053077_-|M23-family-metallopeptidase
MNKTNFGDYLNKSKSRKIYKIFDQNLKREFSYWQFRKLFKSYTWQSDVHELKVCTQNDGTIEQIWIDKANQFGVAVTWKDNSIIGFVMRPLINYDAIKNETTLKYAVPTTDCYEVFWGGDNELYNYHYLYPHQRYAIDLVIKENHKTYKNLGKVNADYFCFGKDIIAPANGTVEKVVNGVQDNSIGSTKESQFLGNYIVIKHAENEYSLIAHLQQYSIIVNEGQNVKYGDIIGKVGNSGNSTEPHIHFQVMNDKNIEACTSLKIRFINNRELIKGDVVCGLQGE
>NZ_CP047782.1|WP_000222271.1|2049736_2052163_+|polysaccharide-lyase-8-family-protein
MTYRMKKWQKLSTITLLMAGVITLNGGEFRSIDKHQIAVADTNVQTTDYEKLRNIWLDVNYGYDKYDENNPDMKKKFEATENEAEKLLKEMKTESDRKYLWESSKDLDTKSADMTRTYRNIEKISEAMKHKNTKLKTDENKTKVKDALEWLHKNAYGKEPDKKVADLTSNFKNKTSRNTNLNWWDYEIGTPRALTNTLILLQEDFTDEEKKKYTAPIKTFAPDSDKILSSVGKSEPAKGGNLVDISKVKLLESIIEEDKDMMKKSIDSFNTVFTYAQNSATGKERNGFYKDGSYIDHQDVPYTGAYGVVLLEGISQMMPMIKETPFNDSNQNDTTLKSWIDDGFMPLIYKGEMMDLSRGRAISRENETSHSASATVMKSLLRLSDTMDKSTKAKYKKIVKTSVESDSSYKQTDYLSSYSDISKMKSLMEDSTISTNGLTQQLKIYNDMDRVTYHNKGLDFAFGLSMTSKNVARYESINGENLKGWHTGAGMSYLYNSDVKHYRDNFWATADMKRLAGTTTLDNEEPKSTDVKKSSKTFVGGTKFDDQHASIGMDFENQDKTLTAKKSYFILNDKIVFLGTGIKSTDSSKNPVTTIENRKANDYKLYKDDTQTTNSDNQETNSLFLESTNSTQNNIGYHFLNESKITVKKESHTGKWSDINKSQKDIQKTDEYYEVTQKHSNTDSKYAYVLYPGLSKDVFKSKASKVTVVKQEDDFHVVKDNESVWAGINYSDSAKTFEINNTKVEVKAKGMFILTKKDDNTYECSFYNPESTNSVSDIESKISMTGYSIINKNTSTSNESGVRFELTK
>NZ_CP047782.1|WP_001791582.1|2049572_2049740_+|hypothetical-protein
MLKIWVIDCLYASTFFVDCLTVDSQLYTLTNFEKLNHYLIIIFIAHAQHKKETCQ
>NZ_CP047782.1|WP_000850000.1|2048913_2049330_-|MerR-family-transcriptional-regulator
MKTKEVVALMNISQDTLRYYEKVGVIPPVNRDENGYRIYNDNDLNWIYLVKNLRNAGVSIESLIEFCRLAQLPKNENIQAQQKQILNKQLEELNENLKTIHDARDLLQYKIDNYDNHIAKINASDNHDDNVERLWERK
>NZ_CP047782.1|WP_000204271.1|2059348_2060785_-|MarR-family-transcriptional-regulator
MTSSKYIEYLQTEVEGQLLDRKRASINPKDVAQHISAFANAEGGKLVIGIEDNGEISGFNHSKAKKKEVYIEAPFEHLYRIPKYTYEIIEVKKRDGTMDEILIFDIEPSYDAIITLKDDSVYLRINDKSRKLTHNQITNLEYDRGSRRFEEELVEYSSIEDVNEELVDEFKQLLNTNVDNEKLLKARGFMREGKLTVAGLLLFSNHINVYLPGARIRFMRYEGTKEESGTRLNIVKDITFDKALPVAIREARAFINTQLREYTFLGKEGRFVTLPEYPEFAWFEGMINSIVHRRYDNQGDHIRIKMFDDRLEISSPGALPASVTLENIKEERYSRNPKLAAALTQYKWVRESNEGVGRIFDEMKQYFLDDPVYSEPNNSSVQLALKNNIIARKKRETGRVSNIITPELFESLNEQQELIVRHLYNQGELTASKIANIIQRSVPTARKRLKELEEMNIISTHGSSKNDPKRTYYLLGFE
>NZ_CP047782.1|WP_000170975.1|2061133_2061532_-|30S-ribosomal-protein-S9
MTLAQVEYRGTGRRKNSVARVRLVPGEGNITVNNRDVREYLPFESLILDLNQPFDVTETKGNYDVLVNVHGGGFTGQAQAIRHGIARALLEADPEYRGSLKRAGLLTRDPRMKERKKPGLKAARRSPQFSKR
>NZ_CP047782.1|WP_001250038.1|2061545_2061983_-|50S-ribosomal-protein-L13
MRQTFMANESNIERKWYVIDAEGQTLGRLSSEVASILRGKNKVTYTPHVDTGDYVIVINASKIEFTGNKETDKVYYRHSNHPGGIKSITAGELRRTNPERLIENSIKGMLPSTRLGEKQGKKLFVYGGAEHPHAAQQPENYELRG
>NZ_CP047782.1|WP_001221836.1|2062231_2063026_-|tRNA-pseudouridine(38-40)-synthase-TruA
MRILVEIAYQGNNFLGFQIQQNGRTVQQQFEKLLQRIHKRHVRIHPSSRTDRGVHAIQQYFHFDTDLNIPMSQWQYAMNRTLPDDIYVNNVVTVDDDFHCRYDCVGKRYRYKVYQAQQRDPFQSGLKTFIPEPLDLDKMNRAAQQFIGTHDFTGFCSQKTEVESKVRTLYQSEIVKTDDGFDYIVTGSGFLYNMVRVLVAFLIEVGKGRHEVSDVPKLLESKNRKNVPFTAPAEGLYLEKIYLDENELLKDFGNDIKIHRKKSL
>NZ_CP047782.1|WP_000791607.1|2063030_2063837_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWMFALILFFMRLAKIQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGIVMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIILAQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQLKWQLRDTLSLIMIIPIAIILFVLKYSGV
>NZ_CP047782.1|WP_000586768.1|2063826_2064687_-|energy-coupling-factor-transporter-ATPase
MIIRFDNVSYTYQKGTPYQHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREMIFGPKNFKMNLDEAKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVVDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKEKLADWHIGLPEIVQLQYDFEQKHQTKLKDIALTEEAFVSLYKEWQHEK
>NZ_CP047782.1|WP_000389651.1|2064683_2065493_-|energy-coupling-factor-transporter-ATPase
MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVSEALEQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEIFDHAEELTTIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL
>NZ_CP047782.1|WP_094409958.1|2065868_2067436_+|IS3-like-element-ISSau2-family-transposase
MKTLKGALFMSIKPKVDIDVLLYMFQEYEKGVSFQYLIDTLQLDINVNTLYPKYKYYKTHGIETLLTQKQYNHYSKELKLKVVNEYLNSNQSTQDIAIKYNIRSSTQVKNWIKMYTVGKEIKNQSPKTGVYIMKARKTTFEERVTIVEYYLNHKQSYREVAEHFNISYGQIYQWVHKYQAHGKNGLVDGRGKGKPKSMMTPEEQKEAEIQALKAQNRLLEMENDVFKKVSSIGKRDDSKRKQITAYKTIEALKHQYPIQRLCRILGISRASYYKWVHYQSSELELENEQLKREIESIYHKYNGIYGYRRIYIYIRLKLGKQVNRKRIYRLMKELNLKAVIRQKRKPYRRSTPQITSENKLNRQFDIDTPNKVWLTDVTEFKIKEGSKIYLSAIYDLGAKRIVSYELGPSNNNQLVFKTFNQAIEKVENTKGILFHSDRGFQYTSKTFKHMLDECGMIQSMSRVSKCIDNGPMEGVWGTIKSEIFRGNKHFKFNSVEEATKTIHDFILFFNHERITLKMADSV
>NZ_CP047782.1|WP_000542274.1|2067688_2068057_-|50S-ribosomal-protein-L17
MGYRKLGRTSDQRKAMLRDLATSLIISERIETTEARAKEVRSVVEKLITLGKKGDLASRRNAAKTLRNVEILNEDETTQTALQKLFGEIAERYTERQGGYTRILKQGPRRGDGAESVIIELV
>NZ_CP047782.1|WP_000569649.1|2068073_2069018_-|DNA-directed-RNA-polymerase-subunit-alpha
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEILNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED

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Crispr_ID: NZ_CP047782_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_8

2099173-2099253

Orphan

Consensus_repeat	Method
TCTATGTTGGGGCCCCGCCAACTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_8

>merge|NZ_CP047782|8|2099173-2099253|CRISPRCasFinder
TCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTTTCGTCACCTTCTATGTTGGGGCCCCGCCAATTTG

>NZ_CP047782|8|8|2099173-2099253|CRISPRCasFinder
TCTATGTTGGGGCCCCGCCAACTTG	CACATTATTGTAAGCTGACTTTTCGTCACCT
TCTATGTTGGGGCCCCGCCAATTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_000866973.1\|2101044_2101278_-\|molybdopterin-synthase-sulfur-carrier-subunit	unknown	unknown	gnl\|CDD\|340452
NZ_CP047782.1\|WP_000951069.1\|2096723_2097164_+\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP047782.1\|WP_001161085.1\|2090111_2090429_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000259736.1\|2102225_2103485_-\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP047782.1\|WP_000592290.1\|2090615_2093783_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP047782.1\|WP_000184403.1\|2097156_2098368_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP047782.1\|WP_000808500.1\|2101283_2101730_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP047782.1\|WP_001573526.1\|2095553_2095805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000643988.1\|2100438_2101038_-\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP047782.1\|WP_000051210.1\|2089702_2089867_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000600967.1\|2095796_2096561_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP047782.1\|WP_000913006.1\|2105750_2106356_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226628
NZ_CP047782.1\|WP_000134529.1\|2103547_2104042_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP047782.1\|WP_000602938.1\|2101743_2102229_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|224677
NZ_CP047782.1\|WP_000066900.1\|2098469_2098820_-\|HTH-type-transcriptional-regulator-SarV	unknown	unknown	gnl\|CDD\|130944
NZ_CP047782.1\|WP_000076914.1\|2104578_2105583_-\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|181084
NZ_CP047782.1\|WP_000503824.1\|2104043_2104550_-\|molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl\|CDD\|223595
NZ_CP047782.1\|WP_000413875.1\|2093899_2095165_-\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_CP047782.1\|WP_000230171.1\|2099396_2100419_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP047782.1\|WP_001791501.1\|2098945_2099116_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_000866973.1\|2101044_2101278_-\|molybdopterin-synthase-sulfur-carrier-subunit	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	2.40505e-24
NZ_CP047782.1\|WP_000951069.1\|2096723_2097164_+\|winged-helix-DNA-binding-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.58234e-15
NZ_CP047782.1\|WP_000066900.1\|2098469_2098820_-\|HTH-type-transcriptional-regulator-SarV	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	2.64009e-20
NZ_CP047782.1\|WP_000259736.1\|2102225_2103485_-\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	7.37627e-158
NZ_CP047782.1\|WP_000592290.1\|2090615_2093783_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP047782.1\|WP_000184403.1\|2097156_2098368_+\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.89275e-72
NZ_CP047782.1\|WP_000808500.1\|2101283_2101730_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.56799e-58
NZ_CP047782.1\|WP_000643988.1\|2100438_2101038_-\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.68918e-67
NZ_CP047782.1\|WP_000602938.1\|2101743_2102229_-\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|224677	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism].	3.19119e-50
NZ_CP047782.1\|WP_000600967.1\|2095796_2096561_-\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.50083e-38
NZ_CP047782.1\|WP_000134529.1\|2103547_2104042_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	5.35275e-97
NZ_CP047782.1\|WP_000076914.1\|2104578_2105583_-\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	4.64376e-130
NZ_CP047782.1\|WP_000503824.1\|2104043_2104550_-\|molybdenum-cofactor-biosynthesis-protein-MoaB	gnl\|CDD\|223595	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism].	2.50849e-64
NZ_CP047782.1\|WP_000413875.1\|2093899_2095165_-\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	2.47464e-141
NZ_CP047782.1\|WP_000230171.1\|2099396_2100419_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.0538e-165
NZ_CP047782.1\|WP_000913006.1\|2105750_2106356_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	1.03488e-114

>NZ_CP047782.1|WP_001791501.1|2098945_2099116_+|hypothetical-protein
MFRFISFGQLVVYSTTFIPKKDILQLNDLECDNNVKEPLKIYYVVILKSGIEMIFS
>NZ_CP047782.1|WP_000066900.1|2098469_2098820_-|HTH-type-transcriptional-regulator-SarV
MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLLDKITKEIEVLSVTN
>NZ_CP047782.1|WP_000184403.1|2097156_2098368_+|MFS-transporter
MTNQGSLNKSPIFTKSFTINFFVNFIVYLCMYLLFVVIAGYSKQAFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILGILGVIISLFIKVDFEVTNSKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILTYLQAFAIERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
>NZ_CP047782.1|WP_000951069.1|2096723_2097164_+|winged-helix-DNA-binding-protein
MLSQEFFNSFITIYRPYLKLTEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>NZ_CP047782.1|WP_000600967.1|2095796_2096561_-|VOC-family-protein
MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
>NZ_CP047782.1|WP_001573526.1|2095553_2095805_+|hypothetical-protein
MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILSIFFILIKSSRLNNILTILSIALAIIHMGILAHSTYVYLY
>NZ_CP047782.1|WP_000413875.1|2093899_2095165_-|lipid-II:glycine-glycyltransferase-FemX
MEKMHITNQEHDAFVKSNPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEIQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMETSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKRK
>NZ_CP047782.1|WP_000592290.1|2090615_2093783_-|efflux-RND-transporter-permease-subunit
MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQNPVISVTTSMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTDMDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQLIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGLFQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASPQQNSKTSASNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQVAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLRNIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYRRLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAIAFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWIVIILSTLILVTTIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKYLKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKHPGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTYDQYEIKIDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWSEDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAKVTNKDVGGTTRQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLAPFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQGMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISSTLLTLVVVPVIYEILFTLKKRFTKR
>NZ_CP047782.1|WP_001161085.1|2090111_2090429_+|hypothetical-protein
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
>NZ_CP047782.1|WP_000051210.1|2089702_2089867_+|hypothetical-protein
MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD
>NZ_CP047782.1|WP_000230171.1|2099396_2100419_-|GTP-3',8-cyclase-MoaA
MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATADGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG
>NZ_CP047782.1|WP_000643988.1|2100438_2101038_-|molybdenum-cofactor-guanylyltransferase-MobA
MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNEIIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMITGKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFKNVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL
>NZ_CP047782.1|WP_000866973.1|2101044_2101278_-|molybdopterin-synthase-sulfur-carrier-subunit
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFENLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
>NZ_CP047782.1|WP_000808500.1|2101283_2101730_-|molybdenum-cofactor-biosynthesis-protein-MoaE
MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE
>NZ_CP047782.1|WP_000602938.1|2101743_2102229_-|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDIQLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEGFKNADFEKVVVYRNEEELQVLQQLTNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQLT
>NZ_CP047782.1|WP_000259736.1|2102225_2103485_-|molybdopterin-molybdotransferase-MoeA
MVVEKRNPIPVKEAIQRIVNQQSTMPAITVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVRIMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETTTGDVVLKKGQVINPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALAEKLGLEVGIYKTQQDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAEVLFNKVAMRPGSVTTVAFADGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQIIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPGGSRGFKAGHTVDIILTESDAAEEELLL
>NZ_CP047782.1|WP_000134529.1|2103547_2104042_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIYKQISNNTNTKGNVLNTAQIAGIMAAKNTSTIIPMCHPLPLTGIDVHFNWDETNAPLYTLNIQTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQRQLDQ
>NZ_CP047782.1|WP_000503824.1|2104043_2104550_-|molybdenum-cofactor-biosynthesis-protein-MoaB
MGEHQNVKLNRTVKAAVLTVSDTRNFDTDKGGQCVLQLLQVDNVEVSDAHYTIVKDEKVAITTQVKKWLEEDVDVIITTGGTGIAQRDVTIEAVKPLLTKEIEGFGELFRYLSYVEDVGTRALLSRAVAGTVNDKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
>NZ_CP047782.1|WP_000076914.1|2104578_2105583_-|molybdopterin-biosynthesis-protein-MoeB
MSQERYSRQILFKQIGEIGQNKINQKCALIIGMGALGTHVAEGLVRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVAAKKHLLALRSDVDIDDYIDHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKHRIPWIYGGVVQSTYTEAAFIPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITYGDIWEGSHYSFGFSKMQRTACTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENTSITHDILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
>NZ_CP047782.1|WP_000913006.1|2105750_2106356_-|ATP-binding-cassette-domain-containing-protein
MLKINLKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG

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Crispr_ID: NZ_CP047782_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047782_9

2566321-2566406

Orphan

Consensus_repeat	Method
CCAACTTGCACATTATTGTAAGCTGACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047782_9

>merge|NZ_CP047782|9|2566321-2566406|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTT

>NZ_CP047782|9|9|2566321-2566406|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTT	CCGCCAGCTTCTATGTTGGGGCCCCG
CCAACTTGCACATTATTGTAAGCTGACTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047782.1\|WP_001789359.1\|2576269_2576515_+\|S4-domain-containing-protein-YaaA	unknown	unknown	gnl\|CDD\|274378
NZ_CP047782.1\|WP_000362509.1\|2570251_2571631_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP047782.1\|WP_001059079.1\|2564124_2564325_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP047782.1\|WP_000410770.1\|2557785_2558298_-\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP047782.1\|WP_000249659.1\|2568307_2570185_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP047782.1\|WP_000491382.1\|2565743_2566097_-\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP047782.1\|WP_001017410.1\|2556697_2557498_+\|arylamine-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225073
NZ_CP047782.1\|WP_000586237.1\|2562587_2563085_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047782.1\|WP_000672029.1\|2563541_2563733_+\|peptide-resistance-ABC-transporter-activity-modulator-VraH	unknown	unknown	unknown
NZ_CP047782.1\|WP_000969811.1\|2574755_2575889_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NZ_CP047782.1\|WP_000143662.1\|2559336_2561217_+\|peptide-resistance-ABC-transporter-permease-subunit-VraE	unknown	unknown	gnl\|CDD\|376899
NZ_CP047782.1\|WP_000742837.1\|2566706_2567546_-\|nucleoid-occlusion-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP047782.1\|WP_000779134.1\|2565280_2565676_-\|DUF3147-family-protein	unknown	unknown	gnl\|CDD\|288237
NZ_CP047782.1\|WP_001290433.1\|2573116_2574478_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_CP047782.1\|WP_000240855.1\|2572248_2572386_-\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|366117
NZ_CP047782.1\|WP_000672031.1\|2561309_2561501_+\|peptide-resistance-ABC-transporter-activity-modulator-VraH	unknown	unknown	unknown
NZ_CP047782.1\|WP_001054127.1\|2564451_2565021_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP047782.1\|WP_001789343.1\|2571774_2572128_-\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|234782
NZ_CP047782.1\|WP_000775112.1\|2576511_2577624_+\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|273173
NZ_CP047782.1\|WP_000215582.1\|2567588_2568308_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637

Protein	Function_ID	Function_description	E-value
NZ_CP047782.1\|WP_001789359.1\|2576269_2576515_+\|S4-domain-containing-protein-YaaA	gnl\|CDD\|274378	TIGR02988, YaaA_near_RecF, S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage. [DNA metabolism, DNA replication, recombination, and repair].	1.44335e-24
NZ_CP047782.1\|WP_000362509.1\|2570251_2571631_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP047782.1\|WP_001059079.1\|2564124_2564325_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.4289e-30
NZ_CP047782.1\|WP_000410770.1\|2557785_2558298_-\|HdeD-family-acid-resistance-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	3.26175e-22
NZ_CP047782.1\|WP_000249659.1\|2568307_2570185_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP047782.1\|WP_000779134.1\|2565280_2565676_-\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	5.93989e-39
NZ_CP047782.1\|WP_001017410.1\|2556697_2557498_+\|arylamine-N-acetyltransferase	gnl\|CDD\|225073	COG2162, NhoA, Arylamine N-acetyltransferase [Secondary metabolites biosynthesis, transport, and catabolism].	9.94075e-101
NZ_CP047782.1\|WP_000969811.1\|2574755_2575889_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	3.87922e-156
NZ_CP047782.1\|WP_000775112.1\|2576511_2577624_+\|DNA-replication/repair-protein-RecF	gnl\|CDD\|273173	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein. All proteins in this family for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	6.08527e-173
NZ_CP047782.1\|WP_000143662.1\|2559336_2561217_+\|peptide-resistance-ABC-transporter-permease-subunit-VraE	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	2.86389e-06
NZ_CP047782.1\|WP_000742837.1\|2566706_2567546_-\|nucleoid-occlusion-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.327e-113
NZ_CP047782.1\|WP_000491382.1\|2565743_2566097_-\|DUF3147-family-protein	gnl\|CDD\|288237	pfam11345, DUF3147, Protein of unknown function (DUF3147). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.	1.35852e-38
NZ_CP047782.1\|WP_001290433.1\|2573116_2574478_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047782.1\|WP_000240855.1\|2572248_2572386_-\|50S-ribosomal-protein-L34	gnl\|CDD\|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	8.39798e-10
NZ_CP047782.1\|WP_001054127.1\|2564451_2565021_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.64314e-16
NZ_CP047782.1\|WP_001789343.1\|2571774_2572128_-\|ribonuclease-P-protein-component	gnl\|CDD\|234782	PRK00499, rnpA, ribonuclease P; Reviewed.	3.11548e-51
NZ_CP047782.1\|WP_000215582.1\|2567588_2568308_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	1.18696e-95

>NZ_CP047782.1|WP_000491382.1|2565743_2566097_-|DUF3147-family-protein
MFSIGSAILHFVIGGIAVALASIIADKVGGKLGGIIATMPAVFLAAIIALALDHRGTQLVEMSMNLSTGAIVGILSCILTVFLTSLYIKHKGYRKGAIFTVVCWFVISLAIFSIRHL
>NZ_CP047782.1|WP_000779134.1|2565280_2565676_-|DUF3147-family-protein
MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHVSRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGFLSWFISAVCIFEAVEFIAQKRLEKHSWKAGKSNSK
>NZ_CP047782.1|WP_001054127.1|2564451_2565021_-|helix-turn-helix-transcriptional-regulator
MNLSKQIKKYRERDGYSQEYLAEKLYVSRQSISNWENDKSLPDIHNLLMMCELFNVTLDDLVKGTIPFVPDIKVQRSLNLWAYVMLIFMTLATILTGPLVVYWNWAWGITVIVIYGIGFYASMKIDDFKKVHKMDNYDRIVAFMNGKDPSEVQTTKARNIKTSVLSFIAFVGAFILIALISMYLANKFL
>NZ_CP047782.1|WP_001059079.1|2564124_2564325_+|cold-shock-protein
MNNGTVKWFNAEKGFGFIEQENGGDVFVHFSGIASDGYKTLEEGQKVTFEITEGQRGDQAVNVQTV
>NZ_CP047782.1|WP_000672029.1|2563541_2563733_+|peptide-resistance-ABC-transporter-activity-modulator-VraH
MKFRELVKQSYEDLKNLTVTWYNVIALAMIVIVLSTITTPIIGIPVGLLGGAYYLKRREEKGK
>NZ_CP047782.1|WP_000586237.1|2562587_2563085_-|hypothetical-protein
MIINLETQQIHFDLEHETPYFQSPEKNRIRLDIDVLNKKQISNIINVIFNNQSKTKCTFLSEYLYPVKFREKTRIGRFFNITNWYEEIHSTDEKYVIATIKNIKNKDIIDYSLYIKKGLVEPFIVFYNQENIFYISNAVIDIISVSKDTLGYIKSEFNDHCASPY
>NZ_CP047782.1|WP_000672031.1|2561309_2561501_+|peptide-resistance-ABC-transporter-activity-modulator-VraH
MKFRELVKQSYEDLKNLTVTWYNVIALAMIVIVLSTVTTPIIGIPVGLLGGAYYLKRREEKGK
>NZ_CP047782.1|WP_000143662.1|2559336_2561217_+|peptide-resistance-ABC-transporter-permease-subunit-VraE
MTFNHIVFKNLRQNLKHYAMYLFSLFFSIVLYFSFTTLQFTKGVNNDDSMAIIKKGALVGSIFLFIIIVIFLMYANHLFVKRRTREFALFQLIGLTRQNILKMLALEQMIVFLITGVVGVLCGIAGAQLLLSIVSKLMSLSINLSIHFEPMALVLTILMLIIAYILILFQSSLFLKRRSILSMMKDSIKTDVTTAKVTTAEVISGVLGIAMIALGYYMATEMFGTFKALTMAMTSPFIILFLTVVGAYLFFRSSVSLIFKTLKKSKNGRVSITDVVFTSSIMYRMKKNAMSLTIIAIISAVTVTVLCFAALSKSNTDQTLTSMAPNDFNVVASQDAQQFESKLSQQHITFSKNAYETITVDNVKDQVITLENGSDSGRTNSILSANTKLTGNNAIITNTKSLPNIINIHLNKDLVVKGTKNETFRVTQEDKGKVYPLNLSFNSPVVEVSPEKYQQLKTQNNVHTFYGYDIKQTSQKEKAQAIAKQFGDKIITYDDMKKEVDATNGILIFVTSFLGLAFLVAAGCIIYIKQMDETEDELSNFRILKRIGFTHTDMLKGLLLKITFNFGLPLLIAILHAVFAAIAFMKLMGNISFMPVIIVIIVYTLIYIVFALIAFVHSNKLIKKTI
>NZ_CP047782.1|WP_000410770.1|2557785_2558298_-|HdeD-family-acid-resistance-protein
MEKGNQGIKWSSLIMGVLLLMLAVVIFTFPIENFYAITWLIGLFVLINGVIQIVYRRKAKALVGGNQNWILFMGIVDILFGLIVIFNVGASSAFFIYMFAFWFIFSSIAGLFTFSGSGSLKLISVIFNLLGIVFGVILLFNPLMGIVFISTMIAIAFVFVGVIYVVDALA
>NZ_CP047782.1|WP_001017410.1|2556697_2557498_+|arylamine-N-acetyltransferase
MNIAKLEDYLQIEPTRYDQPSIEALNYYATRFMLTVPFENIDVQNGKPISVDIDALFNKIVHDKRGGFCYELNTFFKAYLQQKGFNPELMSATIHTPGGGRSQNGSHASLVVSINNVFYVTDVGFGDLPLNAIPITLPDGTQPITDISGTFRAIFNSEDKDIFYVQKYENNHWHTKYEAEFKAREIEEFDQNIEYNQTHPDSVFVKHLLITMPQSFGRATMSENHLTLTKDGTPEKLAITKDNYKQFLTTYFGLNVTISRLENSEN
>NZ_CP047782.1|WP_000742837.1|2566706_2567546_-|nucleoid-occlusion-protein
MKKPFSKLFGLKNKDDIIGHIEEDRNSNVESIQIERIVPNRYQPRQVFEPNKIKELAESIHEHGLLQPIVVRPIEEDMFEIIAGERRFRAIQSLNLPQADVIIRDMDDEETAVVALIENIQRENLSVVEEAEAYKKLLEIGDTTQSELAKSLGKSQSFIANKLRLLKLAPKVLLRLREGKITERHARAVLSLSDSEQEALIEQVIAQKLNVKQTEDRVRQKTGPEKVKAQNLRFAQDVTQARDEVGKSIQAIQQTGLHVEHKDKDHEDYYEIKIRIYKR
>NZ_CP047782.1|WP_000215582.1|2567588_2568308_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MTVEWLAEQLKEHNIELTETQKHQFQTYYRLLVEWNEKMNLTSITDEHDVYLKHFYDSIAPSFYFDFNQPISICDVGAGAGFPSIPLKIMFPQLKVTIVDSLNKRIQFLNHLASELQLQDVSFIHDRAETFGKGVYRESYDVVTARAVARLSVLSELCLPLVKKGGQFVALKSSKGEEELEEAKFAISVLGGNVTETHTFELPEDAGERQMFIIDKKRQTPKKYPRKPGTPNKTPLLEK
>NZ_CP047782.1|WP_000249659.1|2568307_2570185_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MVQEYDVIVIGAGHAGVEAGLASARRGAKTLMLTINLDNIAFMPCNPSVGGPAKGIVVREIDALGGQMAKTIDKTHIQMRMLNTGKGPAVRALRAQADKVLYQQEMKRVIEDEENLHIMQGMVDELIIEDNEVKGVRTNIGTEYLSKAVIITTGTFLRGEIILGNMKYSSGPNHQLPSITLSDNLRELGFDIVRFKTGTPPRVNSKTIDYSKTEIQPGDDVGRAFSFETTEYILDQLPCWLTYTNAETHKVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKFVRFNDKPRHQLFLEPEGRNTNEVYVQGLSTSLPEHVQRQMLETIPGLEKADMMRAGYAIEYDAIVPTQLWPTLETKMIKNLYTAGQINGTSGYEEAAGQGLMAGINAAGKVLNTGEKILSRSDAYIGVLIDDLVTKGTNEPYRLLTSRAEYRLLLRHDNADLRLTDMGYELGMISEERYARFNEKRQQIDAEIKRLSDIRIKPNEHTQAIIEQHGGSRLKDGILAIDLLRRPEMTYDIILEILEEEHQLNADVEEQVEIQTKYEGYINKSLQQVEKVKRMEEKKIPEDLDYSKIDSLATEAREKLSEVKPLNIAQASRISGVNPADISILLIYLEQSKLQRVSD
>NZ_CP047782.1|WP_000362509.1|2570251_2571631_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MDLDTITSISTPMGEGAIGIVRLSGPQAVEIADKLYKGKHLLNDVPSHTINYGHIIDPESKEVVEEVMVSVLRAPKTFTREDIIEINCHGGILTINRVLELTMTYGARMAEPGEFTKRAFLNGRIDLSQAEAVMDFIRSKTDRASKVAMNQIEGRLSDLIKKQRQSILEILAQVEVNIDYPEYDDVEDATTEFLLEQSKEIKQEINRLLDTGAQGKIMREGLSTVIVGKPNVGKSSMLNNLIQDNKAIVTEVAGTTRDVLEEYVNVRGVPLRLVDTAGIRETEDIVEKIGVERSRKALSQADLILFVLNNNEALTQEDYTLYEVVKNEDVIVIVNKMDLEQNIDINEVKDMIGDTPLIQTSMLKQEGIDELEIQIRDLFFGGEVQNQDMTYVSNSRHISLLKQARQTIQDAIDAAESGVPMDMVQIDLTRTWEILGEIIGETASDELIDQLFSQFCLGK
>NZ_CP047782.1|WP_001789343.1|2571774_2572128_-|ribonuclease-P-protein-component
MLLEKAYRIKKNADFQRIYKKGHSVANRQFVVYTCNNKEIDHFRLGISVSKKLGNAVLRNKIKRAIRENFKVHKSHILAKDIIVIARQPAKDMTTLQIQNSLEHVLKIAKVFNKKIK
>NZ_CP047782.1|WP_000240855.1|2572248_2572386_-|50S-ribosomal-protein-L34
MVKRTYQPNKRKHSKVHGFRKRMSTKNGRKVLARRRRKGRKVLSA
>NZ_CP047782.1|WP_001290433.1|2573116_2574478_+|chromosomal-replication-initiator-protein-DnaA
MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNELHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLDIPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
>NZ_CP047782.1|WP_000969811.1|2574755_2575889_+|DNA-polymerase-III-subunit-beta
MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVILTGSDSEISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTNEQFQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQTNFAVSTSETRPVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKNVIIPGKALAELNKIMSDNEEDIDIFFASNQVLFKVGNVNFISRLLEGHYPDTTRLFPENYEIKLSIDNGEFYHAIDRASLLAREGGNNVIKLSTGDDVVELSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYMMDALKAIDNDEVEVEFFGTMKPFILKPKGDDSVTQLILPIRTY
>NZ_CP047782.1|WP_001789359.1|2576269_2576515_+|S4-domain-containing-protein-YaaA
MIILVQEVVVEGDINLGQFLKTEGIIESGGQAKWFLQDVEVLINGVRETRRGKKLEHQDRIDIPELPEDAGSFLIIHQGEQ
>NZ_CP047782.1|WP_000775112.1|2576511_2577624_+|DNA-replication/repair-protein-RecF
MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEDIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEIELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGIDHEIMNNAKLYRINQGEIIK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047782_1	1.1\|513501\|33\|NZ_CP047782\|CRISPRCasFinder	513501-513533	33	NZ_CP047782.1	749823-749855	1	0.97
NZ_CP047782_1	1.1\|513501\|33\|NZ_CP047782\|CRISPRCasFinder	513501-513533	33	NZ_CP047782.1	2133425-2133457	1	0.97
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	776043-776073	1	0.968
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	1394327-1394357	1	0.968
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	2566385-2566415	1	0.968
NZ_CP047782_9	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	NZ_CP047782.1	2874305-2874330	1	0.962
NZ_CP047782_9	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	NZ_CP047782.1	573891-573916	1	0.962
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	526833-526863	2	0.935
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	1770894-1770924	2	0.935
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	578117-578147	2	0.935
NZ_CP047782_8	8.1\|2099198\|31\|NZ_CP047782\|CRISPRCasFinder	2099198-2099228	31	NZ_CP047782.1	622948-622978	2	0.935
NZ_CP047782_9	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	NZ_CP047782.1	1873873-1873898	2	0.923
NZ_CP047782_9	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	NZ_CP047782.1	1933899-1933924	2	0.923

1. spacer 1.1|513501|33|NZ_CP047782|CRISPRCasFinder matches to position: 749823-749855, mismatch: 1, identity: 0.97

attgggaatccaatttctctttgttggggccca	CRISPR spacer
attgggaatccaatttctctgtgttggggccca	Protospacer
******************** ************

2. spacer 1.1|513501|33|NZ_CP047782|CRISPRCasFinder matches to position: 2133425-2133457, mismatch: 1, identity: 0.97

attgggaatccaatttctctttgttggggccca	CRISPR spacer
attgggaatccaatttctctttgttgggaccca	Protospacer
****************************.****

3. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 776043-776073, mismatch: 1, identity: 0.968

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**************************** **

4. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 1394327-1394357, mismatch: 1, identity: 0.968

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**************************** **

5. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 2566385-2566415, mismatch: 1, identity: 0.968

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctgacttttcgtcagct	Protospacer
**************************** **

6. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to position: 2874305-2874330, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctatgttgggggcccg	Protospacer
********************* ****

7. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to position: 573891-573916, mismatch: 1, identity: 0.962

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgtcagcttctatgttggggccccg	Protospacer
***.**********************

8. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 526833-526863, mismatch: 2, identity: 0.935

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctgactttacgtcagct	Protospacer
********************** ***** **

9. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 1770894-1770924, mismatch: 2, identity: 0.935

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattatcgtaagctgacttttcgtcagct	Protospacer
********.******************* **

10. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 578117-578147, mismatch: 2, identity: 0.935

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctggcttttcgtcagct	Protospacer
*****************.********** **

11. spacer 8.1|2099198|31|NZ_CP047782|CRISPRCasFinder matches to position: 622948-622978, mismatch: 2, identity: 0.935

cacattattgtaagctgacttttcgtcacct	CRISPR spacer
cacattattgtaagctgacttttcgccagct	Protospacer
*************************.** **

12. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to position: 1873873-1873898, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccgcg	Protospacer
************.********** **

13. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to position: 1933899-1933924, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttttgtgttggggccccg	Protospacer
**********.*.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 21140

Staphylococcus_phage(100.0%)

head,protease,capsid,portal,tail,terminase,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_031891001.1\|0_1695_+\|terminase	terminase	D2JLE4	Staphylococcus_phage	9.9e-301	90.4
WP_001052526.1\|1708_1912_+	hypothetical protein	D2JLE5	Staphylococcus_phage	4.3e-17	75.4
WP_073396983.1\|1974_3171_+\|portal	phage portal protein	D2JLE6	Staphylococcus_phage	3.8e-198	87.7
WP_025173991.1\|3589_4174_+\|head,protease	HK97 family phage prohead protease	D2JLE7	Staphylococcus_phage	3.0e-103	95.9
WP_000849953.1\|4260_5496_+\|capsid	phage major capsid protein	Q8SDK8	Staphylococcus_phage	1.0e-169	79.5
WP_001240639.1\|5532_5691_+	hypothetical protein	D2JLE9	Staphylococcus_phage	3.9e-18	88.5
WP_001177664.1\|5699_6032_+\|head,tail	phage head-tail adapter protein	A7TWQ4	Staphylococcus_phage	4.6e-45	80.9
WP_000671501.1\|6021_6354_+\|head,tail	head-tail adaptor protein	D2JLF1	Staphylococcus_phage	3.3e-51	83.6
WP_000501001.1\|6353_6731_+	HK97 gp10 family phage protein	D2JLF2	Staphylococcus_phage	6.2e-54	86.4
WP_000608369.1\|6727_7108_+	hypothetical protein	D2JLF3	Staphylococcus_phage	8.7e-56	81.7
WP_031892662.1\|7108_8062_+\|tail	phage tail protein	A7TWD0	Staphylococcus_phage	4.0e-174	99.7
WP_000442602.1\|8126_8573_+	hypothetical protein	O80053	Staphylococcus_phage	1.9e-73	96.6
WP_000570353.1\|8632_8755_+	hypothetical protein	D2JLF6	Staphylococcus_phage	6.9e-15	100.0
WP_160199946.1\|8810_13460_+\|tail	phage tail tape measure protein	A0A1V0E5H1	Staphylococcus_phage	0.0e+00	99.7
WP_160199947.1\|13459_14950_+\|tail	phage tail protein	D2JLF8	Staphylococcus_phage	6.5e-296	99.2
WP_031895030.1\|14965_18751_+	phage minor structural protein	A0EX05	Staphylococcus_phage	0.0e+00	99.9
WP_001153681.1\|18740_18893_+	hypothetical protein	D2JLG0	Staphylococcus_phage	5.2e-20	100.0
WP_001040261.1\|18939_19227_+	hypothetical protein	D2JLG1	Staphylococcus_phage	1.3e-43	100.0
WP_000539688.1\|19284_19581_+	DUF2951 domain-containing protein	D2JLG2	Staphylococcus_phage	2.9e-46	100.0
WP_011447039.1\|19730_19907_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_001791821.1\|19959_20067_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|20118_20373_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|20384_21140_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0

DBSCAN-SWA_2

25812 : 28547

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000449073.1\|25812_26613_+	protein-ADP-ribose hydrolase	A0A2K9L8X2	Tupanvirus	1.5e-41	44.4
WP_160200046.1\|26602_27547_+	NAD-dependent deacetylase	NA	NA	NA	NA
WP_000280814.1\|27524_28547_+	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	6.7e-10	28.1

DBSCAN-SWA_3

49957 : 50800

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000209478.1\|49957_50800_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.5e-12	28.2

DBSCAN-SWA_4

60721 : 81726

Staphylococcus_phage(81.82%)

integrase,coat,terminase

attL 67332:67349|attR 82433:82450

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655687.1\|60721_61825_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	3.9e-11	28.0
WP_001573568.1\|62488_63334_+	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	1.6e-12	34.4
WP_000373076.1\|63487_64369_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_000157348.1\|64398_64602_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_001218732.1\|64613_65711_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_001052483.1\|65796_65988_-	hypothetical protein	U3PCX8	Staphylococcus_phage	4.9e-23	80.0
WP_001261460.1\|66231_66528_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_000934799.1\|66548_67052_+	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_000897044.1\|67103_67346_+	30S ribosomal protein S18	NA	NA	NA	NA
67332:67349	attL	NA	NA	NA	NA
WP_000400841.1\|67577_68297_-	type II toxin-antitoxin system PemK/MazF family toxin	Q4ZE81	Staphylococcus_phage	3.7e-23	29.8
WP_000270135.1\|68409_69624_-\|integrase	site-specific integrase	Q4ZE80	Staphylococcus_phage	3.3e-221	97.3
WP_000230361.1\|69784_70408_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001611932.1\|70556_70721_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001138305.1\|70721_70994_+	winged helix-turn-helix domain-containing protein	Q4ZE77	Staphylococcus_phage	1.2e-43	94.4
WP_000784892.1\|71005_71179_+	hypothetical protein	NA	NA	NA	NA
WP_160199949.1\|71145_71349_+	pathogenicity island protein	A0A1W6JQF4	Staphylococcus_phage	1.7e-29	97.0
WP_000403837.1\|71350_71734_+	hypothetical protein	A0A1W6JQI7	Staphylococcus_phage	4.8e-62	96.1
WP_001103967.1\|71734_72061_+	DUF1474 family protein	Q4ZE75	Staphylococcus_phage	3.5e-53	96.3
WP_001002709.1\|72125_72995_+	hypothetical protein	Q4ZE74	Staphylococcus_phage	5.3e-165	96.2
WP_000447468.1\|73008_74718_+	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	8.2e-303	92.8
WP_000356942.1\|75027_75408_+	hypothetical protein	Q4ZE71	Staphylococcus_phage	1.7e-67	96.8
WP_001019762.1\|75404_76046_+	hypothetical protein	Q4ZE67	Staphylococcus_phage	4.7e-110	92.5
WP_001288442.1\|76753_77098_+	hypothetical protein	Q4ZE66	Staphylococcus_phage	1.3e-50	91.7
WP_000214170.1\|77128_77782_+	hypothetical protein	Q4ZE82	Staphylococcus_phage	7.6e-116	99.5
WP_000771361.1\|77834_78362_+\|coat	spore coat protein	Q4ZE87	Staphylococcus_phage	6.8e-91	100.0
WP_001656917.1\|78493_78706_+	hypothetical protein	Q4ZE86	Staphylococcus_phage	5.4e-31	97.1
WP_001293071.1\|78702_79272_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	4.6e-101	98.4
WP_000801977.1\|79548_80517_+	Abi family protein	A0A0H4U080	Erysipelothrix_phage	2.7e-24	27.3
WP_073392942.1\|80658_81096_+	DUF3102 domain-containing protein	A0A2H4JAH5	uncultured_Caudovirales_phage	9.8e-27	58.2
WP_000813311.1\|81213_81726_+	hypothetical protein	Q4ZE83	Staphylococcus_phage	1.4e-69	100.0
82433:82450	attR	NA	NA	NA	NA

DBSCAN-SWA_5

90878 : 92402

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000930503.1\|90878_92402_-	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	5.5e-40	33.2

DBSCAN-SWA_6

101502 : 104535

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000264071.1\|101502_102969_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5
WP_000424963.1\|102993_104535_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	32.6

DBSCAN-SWA_7

107842 : 108169

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001799349.1\|107842_108169_-\|transposase	IS3 family transposase	A0A2H4PQU1	Staphylococcus_phage	4.3e-11	85.4

DBSCAN-SWA_8

119656 : 122438

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000028598.1\|119656_121213_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.7e-286	98.5
WP_000072632.1\|121205_122438_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	2.7e-45	35.9

DBSCAN-SWA_9

145144 : 151381

Lactococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000634110.1\|145144_146050_+	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	7.2e-48	39.4
WP_001036658.1\|146042_147185_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_000569267.1\|147475_148501_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-31	37.3
WP_000467992.1\|148504_149164_+	ABC transporter permease	NA	NA	NA	NA
WP_000825534.1\|149200_150043_+	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_001170274.1\|150376_151381_+	autolysin/adhesin Aaa	A0A0A7NU10	Lactobacillus_phage	1.4e-23	41.1

DBSCAN-SWA_10

157842 : 159410

Paenibacillus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094409958.1\|157842_159410_-\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8

DBSCAN-SWA_11

169681 : 171379

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001109044.1\|169681_171379_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.9e-54	42.3

DBSCAN-SWA_12

180224 : 180842

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272126.1\|180224_180842_+	dTMP kinase	M1PSC7	Streptococcus_phage	9.2e-47	48.3

DBSCAN-SWA_13

184748 : 187846

Streptococcus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000279925.1\|184748_185588_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-57	45.8
WP_001051120.1\|185872_187846_+\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	3.2e-93	32.6

DBSCAN-SWA_14

193730 : 196195

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001252534.1\|193730_195083_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	8.3e-24	30.4
WP_000933774.1\|195229_196195_+	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	6.1e-45	35.4

DBSCAN-SWA_15

205451 : 215909

Klosneuvirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199955.1\|205451_206747_+\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SI91	Klosneuvirus	8.2e-13	24.3
WP_000551283.1\|206751_207291_+	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.5e-12	29.8
WP_001167888.1\|207548_209642_+	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQ50	Micromonas_sp._RCC1109_virus	4.0e-110	42.7
WP_000148605.1\|210055_210937_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_000057594.1\|211115_212048_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.7e-108	65.7
WP_000167936.1\|212263_213067_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	6.7e-21	29.0
WP_001154303.1\|213044_213410_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000613720.1\|213406_213883_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_016186812.1\|214276_214369_+	hypothetical protein	NA	NA	NA	NA
WP_001288202.1\|214421_215909_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.1e-92	41.1

DBSCAN-SWA_16

234993 : 237450

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000897132.1\|234993_237450_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	A0A1C3S747	Escherichia_phage	1.4e-133	41.2

DBSCAN-SWA_17

243461 : 248244

Catovirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000631982.1\|243461_244862_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	2.5e-55	32.0
WP_000370181.1\|244854_245259_+	Mini-ribonuclease 3	NA	NA	NA	NA
WP_000390332.1\|245266_246013_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000664740.1\|246012_246537_+	NYN domain-containing protein	NA	NA	NA	NA
WP_000872867.1\|246617_247187_+	RNA polymerase sigma factor	NA	NA	NA	NA
WP_001791441.1\|247301_247445_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_001074473.1\|247500_247683_+	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001288302.1\|247695_248244_+	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	8.6e-12	33.5

DBSCAN-SWA_18

251927 : 262881

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000918664.1\|251927_255479_+	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	6.1e-50	24.2
WP_001819727.1\|255642_259239_+	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	4.3e-67	24.6
WP_000031892.1\|259375_259630_+	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_001142337.1\|259727_260141_+	30S ribosomal protein S12	NA	NA	NA	NA
WP_001137495.1\|260206_260677_+	30S ribosomal protein S7	NA	NA	NA	NA
WP_000090315.1\|260799_262881_+	elongation factor G	E4ZFJ7	Streptococcus_phage	2.7e-66	28.3

DBSCAN-SWA_19

265908 : 267096

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000250820.1\|265908_267096_+	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	1.5e-45	30.6

DBSCAN-SWA_20

273684 : 274347

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067261.1\|273684_274347_-	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.4e-24	37.4

DBSCAN-SWA_21

293836 : 295237

Burkholderia_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000347064.1\|293836_295237_+	MFS transporter	Q6JIH2	Burkholderia_virus	9.4e-55	33.0

DBSCAN-SWA_22

300826 : 301483

Elephant_endotheliotropic_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455258.1\|300826_301483_+	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	6.4e-46	46.4

DBSCAN-SWA_23

312787 : 314110

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000860607.1\|312787_314110_-	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	8.2e-109	46.8

DBSCAN-SWA_24

321641 : 324995

Cafeteria_roenbergensis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000180233.1\|321641_322937_+	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.2e-24	27.9
WP_001788287.1\|322964_323486_+	hypothetical protein	NA	NA	NA	NA
WP_001200748.1\|323984_324995_+	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	5.6e-33	27.3

DBSCAN-SWA_25

337948 : 338509

Streptococcus_phage(100.0%)

integrase

attL 330549:330563|attR 343190:343204

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
330549:330563	attL	NA	NA	NA	NA
WP_001044966.1\|337948_338509_+\|integrase	tyrosine-type recombinase/integrase	Q7Y4J2	Streptococcus_phage	1.3e-18	31.3
WP_001044966.1\|337948_338509_+\|integrase	tyrosine-type recombinase/integrase	Q7Y4J2	Streptococcus_phage	1.3e-18	31.3
343190:343204	attR	NA	NA	NA	NA

DBSCAN-SWA_26

351374 : 352118

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894458.1\|351374_352118_-	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.9e-12	29.7

DBSCAN-SWA_27

359051 : 363010

Streptomyces_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000832260.1\|359051_359450_+	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	3.2e-16	39.9
WP_000793055.1\|359566_360862_-	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-14	26.9
WP_000817954.1\|361282_363010_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-110	43.3

DBSCAN-SWA_28

366237 : 367035

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001080809.1\|366237_367035_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	30.7

DBSCAN-SWA_29

373557 : 374601

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030763.1\|373557_374601_+	alpha/beta hydrolase	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	3.8e-16	27.1

DBSCAN-SWA_30

378966 : 379728

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153733.1\|378966_379728_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.2e-33	35.0

DBSCAN-SWA_31

384449 : 385247

Lactobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000731642.1\|384449_385247_-	LysM peptidoglycan-binding domain-containing protein	C1KFN7	Lactobacillus_virus	2.1e-06	35.8

DBSCAN-SWA_32

390498 : 390972

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833480.1\|390498_390972_+	cupin	A0A291AU44	Pandoravirus	4.6e-14	38.7

DBSCAN-SWA_33

396276 : 465462

Staphylococcus_phage(24.0%)

tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001105942.1\|396276_396951_+\|transposase	IS6-like element ISSau6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.3e-113	88.4
WP_001035802.1\|396985_397198_-	hypothetical protein	NA	NA	NA	NA
WP_000120605.1\|397913_398228_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4PQT4	Staphylococcus_phage	4.7e-39	73.1
WP_000153633.1\|398227_399517_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.6e-187	81.1
WP_000358995.1\|399534_399930_+	thioredoxin-dependent arsenate reductase	A0A2H4PQT9	Staphylococcus_phage	8.5e-62	86.3
WP_000726502.1\|400309_400603_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000831610.1\|402616_402928_+	YxeA family protein	NA	NA	NA	NA
WP_000593106.1\|402939_403566_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.1e-22	33.7
WP_000277741.1\|403927_405574_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0
WP_001643491.1\|405728_406106_+	recombinase	NA	NA	NA	NA
WP_001582045.1\|406045_406372_+	recombinase	NA	NA	NA	NA
WP_000273007.1\|406438_406939_+	hypothetical protein	NA	NA	NA	NA
WP_000145511.1\|407302_408163_+	replication initiation protein	NA	NA	NA	NA
WP_000761344.1\|408249_408591_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001002795.1\|408805_408901_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_000843733.1\|409450_410194_-	DUF536 domain-containing protein	NA	NA	NA	NA
WP_000998976.1\|410983_411409_+	hypothetical protein	NA	NA	NA	NA
WP_000397995.1\|412630_412954_-	hypothetical protein	NA	NA	NA	NA
WP_001791613.1\|413182_413275_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_000377738.1\|413576_414398_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000838599.1\|414522_415518_+	YeiH family protein	NA	NA	NA	NA
WP_000690626.1\|415852_416428_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.9e-42	51.7
WP_000069452.1\|416694_418740_+	copper-translocating P-type ATPase CopB	E4ZFI9	Streptococcus_phage	2.3e-65	29.2
WP_000277154.1\|418754_420188_+	multi-copper oxidase Mco	NA	NA	NA	NA
WP_000277738.1\|420254_421901_-\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.0e-289	98.4
WP_160199962.1\|422263_424444_-	cadmium-translocating P-type ATPase CadA	E4ZFI9	Streptococcus_phage	1.2e-250	63.7
WP_000159128.1\|424436_424802_-	winged helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	8.5e-24	47.8
WP_000361064.1\|425039_425417_-	hypothetical protein	NA	NA	NA	NA
WP_001105942.1\|425511_426186_+\|transposase	IS6-like element ISSau6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.3e-113	88.4
WP_000842865.1\|426848_427538_-	DUF1129 family protein	NA	NA	NA	NA
WP_001259673.1\|427664_428108_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000733427.1\|428174_428564_+	hypothetical protein	NA	NA	NA	NA
WP_000545116.1\|428701_429001_+	hypothetical protein	NA	NA	NA	NA
WP_000638614.1\|429080_429623_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000820892.1\|429717_430284_-	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.1e-21	36.9
WP_000148821.1\|430285_430744_-	YaiI/YqxD family protein	NA	NA	NA	NA
WP_000358501.1\|430746_431430_-	hypothetical protein	NA	NA	NA	NA
WP_000469880.1\|431601_432477_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000737163.1\|432695_434327_+	ABC transporter ATP-binding protein/permease	W5SAS9	Pithovirus	2.3e-12	28.2
WP_000857616.1\|434323_435997_+	amino acid ABC transporter ATP-binding/permease protein	W8CYL7	Bacillus_phage	2.0e-11	24.2
WP_001283444.1\|436123_436567_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000794424.1\|436793_437720_+	GTP-binding protein	NA	NA	NA	NA
WP_000435104.1\|437822_438731_+	aldo/keto reductase family oxidoreductase	NA	NA	NA	NA
WP_000180420.1\|438765_439053_+	hypothetical protein	NA	NA	NA	NA
WP_000005632.1\|439335_440889_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_000952030.1\|440974_442348_+	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	1.2e-46	34.1
WP_000154465.1\|442502_442787_-	hypothetical protein	NA	NA	NA	NA
WP_001191871.1\|442783_443401_-	DUF1361 domain-containing protein	NA	NA	NA	NA
WP_000776010.1\|443587_444010_-	DNA-binding protein	NA	NA	NA	NA
WP_001041284.1\|444219_445386_+	multidrug efflux MFS transporter NorA	NA	NA	NA	NA
WP_000216727.1\|445682_446135_+	hypothetical protein	NA	NA	NA	NA
WP_001107240.1\|446308_446791_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_001574605.1\|447040_447805_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_000640738.1\|447801_448722_+	1-phosphofructokinase	NA	NA	NA	NA
WP_001266540.1\|448727_450686_+	PTS transporter subunit EIIA	NA	NA	NA	NA
WP_001292237.1\|450988_452170_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA
WP_000450253.1\|452390_453740_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_000931237.1\|453953_454793_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.1e-56	42.3
WP_000702776.1\|454924_455908_+	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	7.3e-62	43.0
WP_094409958.1\|455966_457533_+\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8
WP_160199963.1\|457642_458698_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	6.1e-14	29.8
WP_000149344.1\|458697_459384_-	response regulator transcription factor	NA	NA	NA	NA
WP_001037807.1\|459358_459832_-	DoxX family protein	NA	NA	NA	NA
WP_001093552.1\|460173_460614_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_000637686.1\|460893_461478_-	hypothetical protein	NA	NA	NA	NA
WP_001062968.1\|461576_462290_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000941336.1\|462293_462713_-	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_000446724.1\|462714_463383_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
WP_160199964.1\|463733_464327_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	8.9e-39	44.0
WP_001217804.1\|464310_465462_+	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	2.1e-23	36.1

DBSCAN-SWA_34

468601 : 492647

uncultured_Caudovirales_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199965.1\|468601_470542_+	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	1.7e-110	39.5
WP_000525101.1\|470813_472697_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	8.8e-56	30.8
WP_000983677.1\|472708_474490_+	DNA helicase RecQ	A0A2P1EM61	Moumouvirus	6.5e-77	37.0
WP_000589241.1\|474710_475688_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-25	33.8
WP_000180987.1\|475680_477195_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_000663016.1\|477434_478493_+	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	5.7e-20	26.5
WP_000197262.1\|478651_479194_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000429002.1\|479745_480663_-	lipid kinase	A0A1V0SBJ0	Catovirus	8.2e-07	22.0
WP_031788440.1\|480753_480855_+	hypothetical protein	NA	NA	NA	NA
WP_000193750.1\|480932_482438_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_000930016.1\|482777_483278_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.7e-52	66.2
WP_001068491.1\|483297_484164_-	DMT family transporter	NA	NA	NA	NA
WP_000692521.1\|484965_485364_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_000855505.1\|485326_487432_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_160199966.1\|487551_488523_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	5.5e-171	91.3
WP_000876311.1\|489974_490946_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	7.8e-141	80.2
WP_001245566.1\|490932_491889_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	5.5e-06	60.0
WP_000616865.1\|491885_492647_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	7.2e-17	30.1

DBSCAN-SWA_35

501924 : 507629

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000460983.1\|501924_502995_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-16	33.5
WP_000258151.1\|503312_504368_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_000192947.1\|504531_505173_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.0e-37	48.3
WP_000686342.1\|505316_506183_+	DegV family protein	NA	NA	NA	NA
WP_000370984.1\|506546_507629_+	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	1.2e-44	35.8

DBSCAN-SWA_36

514067 : 514907

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000749385.1\|514067_514907_+	CHAP domain-containing protein	A0A2H4J675	uncultured_Caudovirales_phage	3.5e-12	42.2

DBSCAN-SWA_37

518225 : 521072

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000662687.1\|518225_521072_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.2

DBSCAN-SWA_38

525411 : 532301

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199967.1\|525411_526347_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	8.4e-84	49.2
WP_000369719.1\|527114_528026_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	36.1
WP_001248939.1\|528022_529018_+	YvcK family protein	A1IMD5	Streptococcus_phage	4.8e-53	41.9
WP_000006551.1\|529126_530071_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.1e-54	40.6
WP_000121211.1\|530129_531077_-\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0
WP_001049165.1\|531713_532301_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.2e-53	55.3

DBSCAN-SWA_39

542989 : 552686

Staphylococcus_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001121760.1\|542989_544294_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.7e-196	80.7
WP_000785248.1\|544631_545090_+	hypothetical protein	NA	NA	NA	NA
WP_000556760.1\|545156_545390_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_001165967.1\|545518_546259_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_001050041.1\|546292_548665_+	ribonuclease R	Q0GXV6	Lactococcus_phage	1.9e-92	38.8
WP_001085185.1\|548686_549151_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.5e-81	100.0
WP_000121211.1\|550553_551501_+\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0
WP_001574560.1\|551957_552686_-	DUF5067 domain-containing protein	H9A0X8	Staphylococcus_phage	4.8e-18	36.8

DBSCAN-SWA_40

562160 : 563404

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001574556.1\|562160_562847_+	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.8e-33	54.2
WP_001059082.1\|563203_563404_+	cold-shock protein	Q9AZD3	Lactococcus_phage	1.4e-20	70.8

DBSCAN-SWA_41

566809 : 571987

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016187137.1\|566809_567370_+	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	3.8e-31	40.9
WP_000255545.1\|567442_568060_-	amino acid transporter	NA	NA	NA	NA
WP_000569884.1\|568215_568710_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000974455.1\|569108_569531_-	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000150036.1\|569678_570395_+	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	6.8e-17	29.7
WP_000422908.1\|570477_571017_+	nitroreductase	NA	NA	NA	NA
WP_001147955.1\|571166_571487_-	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	3.1e-06	36.4
WP_000589549.1\|571630_571987_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.7e-19	46.6

DBSCAN-SWA_42

575096 : 576122

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199970.1\|575096_576122_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-27	36.3

DBSCAN-SWA_43

580072 : 583595

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000168845.1\|580072_580834_+	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	4.4e-06	23.3
WP_000205574.1\|580931_582239_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000807671.1\|582353_583595_+	cysteine desulfurase	Q2XUY6	environmental_halophage	1.1e-110	44.5

DBSCAN-SWA_44

596806 : 599475

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000129645.1\|596806_598264_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	4.4e-39	28.3
WP_000613541.1\|598260_599475_+	PG:teichoic acid D-alanyltransferase DltB	A0A125RNP0	Pseudomonas_phage	8.5e-20	26.1

DBSCAN-SWA_45

603518 : 607146

Lake_Baikal_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001143497.1\|603518_603878_+	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	2.1e-14	38.6
WP_000046076.1\|604331_605540_+	NADH dehydrogenase	NA	NA	NA	NA
WP_001009683.1\|605670_607146_+	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.2e-47	34.9

DBSCAN-SWA_46

617080 : 624074

Aureococcus_anophage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000035058.1\|617080_617674_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.1e-25	41.3
WP_001067294.1\|618088_618466_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000838047.1\|618827_619955_+	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_000167321.1\|620262_621453_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.3e-33	30.0
WP_000138487.1\|621561_622806_+	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000185311.1\|623144_624074_-	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	1.8e-38	37.5

DBSCAN-SWA_47

634229 : 641689

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154949.1\|634229_637883_+	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	7.7e-24	24.3
WP_000670753.1\|638048_638951_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_000902813.1\|639276_639666_+	YisL family protein	NA	NA	NA	NA
WP_000277741.1\|640042_641689_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0

DBSCAN-SWA_48

644954 : 651765

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001044234.1\|644954_646769_+	O-acetyltransferase	B5WZU0	Pseudomonas_phage	8.8e-37	33.9
WP_000353950.1\|646971_649581_+	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	5.5e-117	34.3
WP_001047061.1\|649639_650509_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000619360.1\|650619_651765_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	1.5e-05	26.0

DBSCAN-SWA_49

662504 : 714413

Bacillus_virus(20.0%)

protease,tRNA,transposase,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000786746.1\|662504_663446_+	ABC transporter ATP-binding protein	F2Y1V6	Organic_Lake_phycodnavirus	9.3e-06	26.9
WP_000197096.1\|663464_665120_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000517177.1\|665331_665598_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000121211.1\|665589_666537_-\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0
WP_073392975.1\|666651_668121_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001067041.1\|668171_669158_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-15	30.0
WP_000427776.1\|669160_670141_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.7e-16	34.1
WP_001574526.1\|670133_670784_+	ABC transporter permease	NA	NA	NA	NA
WP_001180271.1\|670795_671677_+	ABC transporter permease	NA	NA	NA	NA
WP_094409958.1\|671765_673333_-\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8
WP_160193886.1\|673628_675275_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	9.0e-291	98.7
WP_000448933.1\|675301_676291_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_000258003.1\|676585_676981_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_001217728.1\|677351_678071_+	adaptor protein MecA	NA	NA	NA	NA
WP_000959276.1\|678191_679178_+	competence protein CoiA	NA	NA	NA	NA
WP_000082722.1\|679225_681034_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	9.3e-47	24.5
WP_000896691.1\|681493_682300_-	DsbA family protein	NA	NA	NA	NA
WP_000214067.1\|682322_682688_-	hypothetical protein	NA	NA	NA	NA
WP_000224620.1\|682791_683385_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_001242102.1\|683570_683918_+	hypothetical protein	NA	NA	NA	NA
WP_001077683.1\|683934_684570_+	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_001270834.1\|684586_685396_+	NAD kinase	NA	NA	NA	NA
WP_000669938.1\|685392_686247_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_160199971.1\|686267_687653_+	magnesium transporter	NA	NA	NA	NA
WP_000395156.1\|687662_689507_+	sodium:proton antiporter	NA	NA	NA	NA
WP_000933195.1\|689784_690555_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_000933105.1\|690750_691836_-	AI-2E family transporter	NA	NA	NA	NA
WP_000570704.1\|692177_693746_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_000889176.1\|693888_694647_+	esterase family protein	NA	NA	NA	NA
WP_001060545.1\|694812_695538_+	hypothetical protein	NA	NA	NA	NA
WP_000355329.1\|695539_696391_+	hypothetical protein	NA	NA	NA	NA
WP_000600387.1\|697132_697642_+	hypothetical protein	NA	NA	NA	NA
WP_001794241.1\|697754_698963_-	MFS transporter	NA	NA	NA	NA
WP_000258649.1\|698922_700098_-	diglucosyl diacylglycerol synthase	NA	NA	NA	NA
WP_000340133.1\|700529_702014_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_001794242.1\|701994_702255_+	hypothetical protein	NA	NA	NA	NA
WP_001049957.1\|702254_703817_+	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	2.2e-36	28.2
WP_000928413.1\|704118_704922_+	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_001794169.1\|705140_707465_+\|protease	serine protease	W5SAB9	Pithovirus	4.0e-10	26.8
WP_000021872.1\|707481_708840_+	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_000414169.1\|708978_710490_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_000287265.1\|710978_711548_-	competence protein ComK	NA	NA	NA	NA
WP_000876825.1\|711757_711976_+	IDEAL domain-containing protein	NA	NA	NA	NA
WP_000668820.1\|712056_713043_-	lipoate--protein ligase	NA	NA	NA	NA
WP_000214898.1\|713241_713418_+	YkvS family protein	NA	NA	NA	NA
WP_001033867.1\|713432_714035_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_099119695.1\|714335_714413_+\|holin	putative holin-like toxin	NA	NA	NA	NA

DBSCAN-SWA_50

717662 : 718304

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571191.1\|717662_718304_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-19	33.7

DBSCAN-SWA_51

722927 : 723218

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001794164.1\|722927_723218_-	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	2.6e-07	38.0

DBSCAN-SWA_52

731521 : 732613

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199973.1\|731521_732613_-	Glu-specific serine endopeptidase SspA	A0A2H4PQP7	Staphylococcus_phage	1.1e-15	31.7

DBSCAN-SWA_53

736279 : 740053

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001074519.1\|736279_740053_-	bifunctional autolysin	A0A1J0MFB0	Staphylococcus_phage	1.1e-54	38.0

DBSCAN-SWA_54

750232 : 764995

Synechococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000225845.1\|750232_751093_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.2e-39	38.8
WP_000861576.1\|751293_751776_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.0e-22	44.7
WP_001010391.1\|751762_752887_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000174050.1\|752890_753595_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	41.6
WP_000848351.1\|753594_753858_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666808.1\|753859_754531_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000032734.1\|754523_756713_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.1e-140	39.2
WP_000483716.1\|756691_758176_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	8.5e-46	31.4
WP_000030814.1\|758168_759197_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	7.6e-62	41.4
WP_000238673.1\|759199_759766_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.6e-29	40.1
WP_000709288.1\|759780_761259_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.2e-77	51.5
WP_001101912.1\|761280_762528_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_000273254.1\|762795_763602_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000921981.1\|763594_764995_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-10	25.7

DBSCAN-SWA_55

768174 : 772554

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000685075.1\|768174_769347_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	1.5e-74	42.6
WP_000505964.1\|769400_769943_+	hypothetical protein	NA	NA	NA	NA
WP_000437472.1\|770096_770363_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_000040041.1\|770365_772084_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_001289622.1\|772320_772554_-	glutaredoxin family protein	G3MBF0	Bacillus_virus	1.3e-09	38.7

DBSCAN-SWA_56

778668 : 779220

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000957036.1\|778668_779220_-	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-13	42.2

DBSCAN-SWA_57

783861 : 787504

Erysipelothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000260117.1\|783861_785268_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-46	29.1
WP_000455584.1\|785438_785714_+	UPF0223 family protein	NA	NA	NA	NA
WP_001020627.1\|785857_786397_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000433551.1\|786409_787504_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-37	44.3

DBSCAN-SWA_58

809145 : 812056

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000757584.1\|809145_810075_-	glycerophosphodiester phosphodiesterase	M1I1K8	Paramecium_bursaria_Chlorella_virus	6.5e-12	26.2
WP_001049150.1\|810313_810568_+	YlbG family protein	NA	NA	NA	NA
WP_000814565.1\|810570_810960_-	hypothetical protein	NA	NA	NA	NA
WP_001263793.1\|811029_811572_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_000401377.1\|811573_812056_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2

DBSCAN-SWA_59

824035 : 825094

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003566.1\|824035_825094_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5

DBSCAN-SWA_60

829972 : 834530

Bodo_saltans_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161937.1\|829972_831685_+	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	6.8e-15	24.0
WP_001249264.1\|831694_834043_+	endonuclease MutS2	F2QAF8	Phaeocystis_pouchetii_virus	7.2e-15	25.1
WP_001018928.1\|834215_834530_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.6e-25	46.6

DBSCAN-SWA_61

845964 : 925558

100

Staphylococcus_phage(94.12%)

integrase,head,protease,capsid,portal,tail,transposase,terminase,tRNA,holin

attL 839943:839959|attR 858271:858287

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
839943:839959	attL	NA	NA	NA	NA
WP_000669541.1\|845964_846315_+	complement inhibitor SCIN-C	A7TWS0	Staphylococcus_phage	1.9e-20	50.0
WP_001032820.1\|846563_846749_-	hypothetical protein	NA	NA	NA	NA
WP_000231331.1\|847358_847592_-	hypothetical protein	NA	NA	NA	NA
WP_000857191.1\|848461_849499_-\|integrase	site-specific integrase	A0EWV2	Staphylococcus_phage	9.1e-180	100.0
WP_000825947.1\|849557_850022_-	hypothetical protein	A0EWV3	Staphylococcus_phage	1.1e-28	100.0
WP_000705248.1\|850121_850304_-	hypothetical protein	M9NSW6	Staphylococcus_phage	4.1e-27	100.0
WP_000591749.1\|850507_850849_-	hypothetical protein	A0A2I6PF04	Staphylococcus_phage	4.6e-56	100.0
WP_000759682.1\|850854_851787_-	ATP-dependent helicase	A0A2I6PEZ7	Staphylococcus_phage	5.7e-173	100.0
WP_001031454.1\|851802_852516_-	helix-turn-helix transcriptional regulator	M9NUL0	Staphylococcus_phage	1.2e-130	100.0
WP_001801500.1\|852478_852652_+	hypothetical protein	NA	NA	NA	NA
WP_000854073.1\|852648_852912_+	helix-turn-helix transcriptional regulator	A0A2I6PF09	Staphylococcus_phage	2.1e-40	98.9
WP_001025404.1\|852927_853143_+	DUF2829 domain-containing protein	A0A0H3U4C7	Staphylococcus_phage	4.8e-35	100.0
WP_000128907.1\|853131_853461_-	hypothetical protein	M9NS98	Staphylococcus_phage	2.7e-53	100.0
WP_001148605.1\|853511_854264_+	oxidoreductase	M9NTH5	Staphylococcus_phage	1.1e-139	100.0
WP_001148862.1\|854279_854477_+	hypothetical protein	O80075	Staphylococcus_phage	3.5e-24	87.7
WP_000762519.1\|854463_854844_-	DUF2513 domain-containing protein	Q9T1Z5	Staphylococcus_phage	3.4e-68	99.2
WP_001120201.1\|854898_855222_+	DUF771 domain-containing protein	A0A075LYF5	Staphylococcus_phage	3.0e-57	100.0
WP_000048129.1\|855218_855380_+	DUF1270 family protein	A0A1P8L6G0	Staphylococcus_phage	1.9e-20	100.0
WP_000165371.1\|855474_855777_+	DUF2482 family protein	A0A1P8L6F8	Staphylococcus_phage	7.0e-48	100.0
WP_000291510.1\|855781_856042_+	DUF1108 family protein	A0A1P8L6F5	Staphylococcus_phage	5.2e-44	100.0
WP_001205732.1\|856050_856314_+	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
WP_000700555.1\|856322_858266_+	AAA family ATPase	S4V9K6	Staphylococcus_phage	0.0e+00	100.0
WP_000138475.1\|858267_859188_+	recombinase	A0A2I6PDH5	Staphylococcus_phage	2.3e-166	100.0
858271:858287	attR	NA	NA	NA	NA
WP_073394849.1\|859268_859886_+	MBL fold metallo-hydrolase	A0A2I6PDI9	Staphylococcus_phage	9.1e-87	100.0
WP_000610648.1\|859886_860357_+	single-stranded DNA-binding protein	A0EWX3	Staphylococcus_phage	1.3e-80	98.7
WP_000148321.1\|860386_861280_+	DnaD domain-containing protein	A0A2I6PDG7	Staphylococcus_phage	5.5e-141	99.3
WP_000338530.1\|861286_861505_+	hypothetical protein	A0A2I6PDG4	Staphylococcus_phage	1.0e-37	100.0
WP_000401960.1\|861513_861918_+	RusA family crossover junction endodeoxyribonuclease	A0EWX6	Staphylococcus_phage	1.9e-72	100.0
WP_000101288.1\|861930_862299_+	hypothetical protein	A0A0H3U2T3	Staphylococcus_phage	2.0e-49	100.0
WP_000131370.1\|862302_862545_+	hypothetical protein	Q4ZDP7	Staphylococcus_virus	2.1e-39	95.0
WP_001065097.1\|862559_862814_+	DUF1024 family protein	A0A0H3U469	Staphylococcus_phage	5.0e-39	100.0
WP_001066447.1\|862963_863500_+	hypothetical protein	A0A0H3U2Z8	Staphylococcus_phage	7.2e-96	100.0
WP_001282074.1\|863536_863782_+	hypothetical protein	A0A2I6PDW7	Staphylococcus_phage	5.0e-36	100.0
WP_000195803.1\|863778_863985_+	DUF1381 domain-containing protein	A0A0H3U2R7	Staphylococcus_phage	1.3e-29	100.0
WP_000592207.1\|863981_864368_+	hypothetical protein	W5R986	Staphylococcus_phage	3.0e-64	100.0
WP_000595265.1\|864364_864514_+	transcriptional activator RinB	A0A1W6JPZ2	Staphylococcus_phage	4.8e-18	100.0
WP_001622114.1\|864513_864714_+	DUF1514 domain-containing protein	A0A2I6PDV9	Staphylococcus_phage	4.0e-28	98.5
WP_000590122.1\|864741_865158_+	hypothetical protein	G4KNP7	Staphylococcus_phage	1.3e-76	100.0
WP_000988336.1\|865389_865689_+	HNH endonuclease	A0EWY8	Staphylococcus_phage	4.6e-52	100.0
WP_000402904.1\|865819_866164_+	hypothetical protein	G4KNP9	Staphylococcus_phage	9.4e-57	100.0
WP_000625088.1\|866160_867822_+\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	100.0
WP_000025274.1\|867837_869025_+\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	1.0e-219	100.0
WP_000642728.1\|869008_869746_+\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	1.8e-129	100.0
WP_000154559.1\|869769_870915_+\|capsid	phage major capsid protein	G4KNQ3	Staphylococcus_phage	9.6e-215	100.0
WP_000238236.1\|870934_871219_+	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
WP_000150936.1\|871208_871493_+\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000755150.1\|871476_871839_+\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000114227.1\|871835_872240_+	hypothetical protein	G4KNQ5	Staphylococcus_phage	2.1e-68	99.3
WP_000565498.1\|872236_872644_+	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000268733.1\|872644_873289_+\|tail	phage tail protein	A0A1X9H0J2	Staphylococcus_phage	1.5e-119	100.0
WP_071621395.1\|873330_873555_+	hypothetical protein	A0A075LYE8	Staphylococcus_phage	3.0e-32	100.0
WP_001096355.1\|873604_873955_+	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_001796452.1\|874199_878729_+\|tail	phage tail tape measure protein	A0A2I6PDK2	Staphylococcus_phage	0.0e+00	99.8
WP_160199974.1\|878725_880210_+\|tail	phage tail protein	A0A2I6PDJ0	Staphylococcus_phage	5.8e-297	99.8
WP_160199975.1\|880225_884011_+	hypothetical protein	A0A1X9H0H3	Staphylococcus_phage	0.0e+00	98.4
WP_001153681.1\|884000_884153_+	hypothetical protein	D2JLG0	Staphylococcus_phage	5.2e-20	100.0
WP_001040261.1\|884199_884487_+	hypothetical protein	D2JLG1	Staphylococcus_phage	1.3e-43	100.0
WP_000539688.1\|884544_884841_+	DUF2951 domain-containing protein	D2JLG2	Staphylococcus_phage	2.9e-46	100.0
WP_011447039.1\|884990_885167_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_001791821.1\|885219_885327_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|885378_885633_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|885644_886400_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000919350.1\|886590_887082_+	staphylokinase	A0A1X9H028	Staphylococcus_phage	9.5e-87	100.0
WP_020444758.1\|887608_888067_+	amidase	R9QTN8	Staphylococcus_phage	4.9e-85	98.7
WP_000727649.1\|888161_888611_-	chemotaxis-inhibiting protein CHIPS	A0A1P8L6A8	Staphylococcus_phage	1.1e-78	100.0
WP_000702263.1\|889296_889647_+	complement inhibitor SCIN-A	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|889699_889960_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000669789.1\|890270_890450_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	2.2e-25	100.0
WP_000765703.1\|892118_892265_+	hypothetical protein	NA	NA	NA	NA
WP_001801391.1\|892221_892449_+	hypothetical protein	Q4ZBW5	Staphylococcus_virus	1.9e-18	67.7
WP_000277741.1\|892750_894397_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0
WP_001224174.1\|894708_895425_-	superantigen-like protein SSL12	NA	NA	NA	NA
WP_000794663.1\|895533_896259_-	superantigen-like protein SSL13	NA	NA	NA	NA
WP_000739586.1\|896368_897094_-	superantigen-like protein SSL14	NA	NA	NA	NA
WP_000793607.1\|897523_898525_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_001074353.1\|898547_899480_+	carbamate kinase	NA	NA	NA	NA
WP_014532609.1\|899701_901207_+	YfcC family protein	NA	NA	NA	NA
WP_000149426.1\|901513_901741_+	hypothetical protein	NA	NA	NA	NA
WP_001239277.1\|902056_903004_-	TDT family transporter	NA	NA	NA	NA
WP_001245800.1\|903250_903448_+	hypothetical protein	A0A0K1LL29	Staphylococcus_phage	1.2e-19	85.2
WP_000398672.1\|904346_904481_+	beta-class phenol-soluble modulin	NA	NA	NA	NA
WP_001794142.1\|904604_905300_+	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_001289711.1\|905407_905848_-	N-acetyltransferase	NA	NA	NA	NA
WP_000340456.1\|906042_907656_+	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA
WP_000480800.1\|907799_908231_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_000468384.1\|908246_909182_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_000257598.1\|909195_909597_+	cell division protein FtsL	NA	NA	NA	NA
WP_001118652.1\|909577_911812_+	penicillin-binding protein	NA	NA	NA	NA
WP_000578458.1\|912103_913069_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_000935984.1\|913070_914420_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_000342188.1\|914435_915755_+	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_000391030.1\|915860_917267_+	cell division protein FtsA	NA	NA	NA	NA
WP_000888997.1\|917299_918472_+	cell division protein FtsZ	NA	NA	NA	NA
WP_076050783.1\|918804_919521_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_001548498.1\|919544_920213_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000018608.1\|920209_920773_+	cell division protein SepF	NA	NA	NA	NA
WP_000354114.1\|920784_921075_+	YggT family protein	NA	NA	NA	NA
WP_000232505.1\|921157_921964_+	RNA-binding protein	NA	NA	NA	NA
WP_001117068.1\|921987_922584_+	DivIVA domain-containing protein	NA	NA	NA	NA
WP_000384706.1\|922804_925558_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	2.1e-90	28.0

DBSCAN-SWA_62

930489 : 935100

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178615.1\|930489_931797_+	uracil transporter	Q9KX94	Enterobacteria_phage	3.3e-54	34.0
WP_001016166.1\|931824_932706_+	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.6e-31	33.9
WP_000767018.1\|932723_933998_+	dihydroorotase	NA	NA	NA	NA
WP_001190910.1\|933999_935100_+	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	9.6e-63	36.7

DBSCAN-SWA_63

939067 : 939679

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001040248.1\|939067_939679_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	1.6e-27	33.8

DBSCAN-SWA_64

942993 : 945250

Abalone_herpesvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368225.1\|942993_943617_+	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	6.1e-22	34.1
WP_000933956.1\|943616_943835_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000722165.1\|944050_945250_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.2e-42	32.9

DBSCAN-SWA_65

950259 : 951195

Prochlorococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161291.1\|950259_951195_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	4.7e-10	28.0

DBSCAN-SWA_66

954342 : 956337

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000579564.1\|954342_956337_+	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8

DBSCAN-SWA_67

966707 : 968828

Trichoplusia_ni_ascovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167269.1\|966707_967442_+	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3
WP_000426914.1\|967747_967981_+	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000043237.1\|968096_968828_+	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8

DBSCAN-SWA_68

982212 : 995883

Emiliania_huxleyi_virus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000176401.1\|982212_982980_+	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	2.5e-25	44.1
WP_001020801.1\|983088_984255_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_000110252.1\|984276_985185_+	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	2.3e-17	33.2
WP_001041658.1\|985411_986530_+	LysM peptidoglycan-binding domain-containing protein	A0A1W6JQB6	Staphylococcus_phage	9.5e-50	61.1
WP_000672864.1\|986557_987802_+	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA
WP_000620184.1\|987973_988846_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_001557331.1\|989019_991095_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-105	39.2
WP_000195263.1\|991250_992558_+\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_001015609.1\|992975_993872_+	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	6.1e-31	31.9
WP_000072681.1\|993868_994414_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_000379051.1\|994479_995883_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	6.4e-27	25.6

DBSCAN-SWA_69

1000657 : 1001428

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000473705.1\|1000657_1001428_+	isoprenyl transferase	R9W0U9	Flavobacterium_phage	7.3e-25	41.5

DBSCAN-SWA_70

1005701 : 1017516

Clostridium_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000139497.1\|1005701_1010012_+	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	3.5e-23	41.2
WP_000036631.1\|1010301_1010769_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_000097463.1\|1010789_1011965_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000727423.1\|1011985_1012270_+	YlxR family protein	NA	NA	NA	NA
WP_000020856.1\|1012266_1012584_+	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000043642.1\|1012588_1014706_+	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	2.4e-25	25.1
WP_000097322.1\|1015092_1015443_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000282296.1\|1015612_1016530_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000864182.1\|1016544_1017516_+	riboflavin biosynthesis protein RibF	A0A1V0SJE1	Klosneuvirus	1.7e-07	32.1

DBSCAN-SWA_71

1022656 : 1026914

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042907377.1\|1022656_1024900_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.9e-84	47.7
WP_001293307.1\|1024904_1025618_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000089941.1\|1025648_1026914_+	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.2e-40	26.8

DBSCAN-SWA_72

1032399 : 1033443

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368166.1\|1032399_1033443_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.3e-124	69.2

DBSCAN-SWA_73

1042857 : 1049339

Cafeteria_roenbergensis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000073334.1\|1042857_1045476_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.8e-41	23.7
WP_000516249.1\|1045488_1047498_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	4.1e-59	30.2
WP_001077635.1\|1047503_1048046_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_001103747.1\|1048520_1049339_+	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	3.1e-26	35.1

DBSCAN-SWA_74

1053877 : 1111636

Staphylococcus_phage(38.89%)

head,tRNA,transposase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001574397.1\|1053877_1054813_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_000561357.1\|1054827_1055061_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000448078.1\|1055282_1055759_-	glutathione peroxidase	Q70H87	Fowlpox_virus	1.2e-22	38.0
WP_000068622.1\|1055870_1057109_+	GTPase HflX	NA	NA	NA	NA
WP_000652040.1\|1057127_1058366_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000624945.1\|1058609_1058978_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001126603.1\|1058996_1060337_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001659797.1\|1060830_1061028_+	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	1.7e-10	48.4
WP_078367270.1\|1061319_1061856_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	1.3e-28	43.6
WP_000746372.1\|1061836_1062340_-\|transposase	transposase	NA	NA	NA	NA
WP_001255377.1\|1062448_1062790_-	cystatin-like fold lipoprotein	NA	NA	NA	NA
WP_000810443.1\|1062845_1063436_-	hypothetical protein	NA	NA	NA	NA
WP_031838476.1\|1063442_1064489_-	CHAP domain-containing protein	A0A1X9I9L1	Staphylococcus_phage	8.1e-19	36.9
WP_000681139.1\|1064478_1066326_-	membrane protein	NA	NA	NA	NA
WP_160199978.1\|1066330_1067689_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	8.9e-42	29.7
WP_001049264.1\|1067742_1070238_-	DUF87 domain-containing protein	NA	NA	NA	NA
WP_000358146.1\|1070272_1070656_-	hypothetical protein	NA	NA	NA	NA
WP_000015642.1\|1070667_1070928_-	hypothetical protein	NA	NA	NA	NA
WP_000692007.1\|1070932_1071988_-	conjugal transfer protein	NA	NA	NA	NA
WP_000388596.1\|1072048_1073074_-	replication initiation factor domain-containing protein	NA	NA	NA	NA
WP_000386891.1\|1073315_1073618_-	hypothetical protein	NA	NA	NA	NA
WP_000805733.1\|1073631_1073952_-	DUF961 domain-containing protein	NA	NA	NA	NA
WP_000134547.1\|1074102_1074387_-	hypothetical protein	NA	NA	NA	NA
WP_001071312.1\|1075072_1075285_+	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	3.6e-19	72.5
WP_001002343.1\|1075581_1075788_+	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	1.9e-12	56.7
WP_031788482.1\|1076489_1076600_+	hypothetical protein	NA	NA	NA	NA
WP_000006110.1\|1076992_1077178_+	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.4e-19	78.7
WP_000121213.1\|1077389_1078337_-\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.6e-183	99.7
WP_000477487.1\|1078763_1079180_+	hypothetical protein	NA	NA	NA	NA
WP_000585095.1\|1080700_1080952_+	hypothetical protein	NA	NA	NA	NA
WP_077670290.1\|1081012_1081678_+\|capsid	phage capsid protein	A0A1J0MF61	Staphylococcus_phage	4.6e-60	53.0
WP_000905625.1\|1081679_1081877_+	hypothetical protein	NA	NA	NA	NA
WP_001791415.1\|1081941_1082070_+	hypothetical protein	NA	NA	NA	NA
WP_000414196.1\|1082036_1082621_+	hypothetical protein	NA	NA	NA	NA
WP_001791418.1\|1083289_1083463_+	hypothetical protein	NA	NA	NA	NA
WP_001217295.1\|1083473_1083668_+	hypothetical protein	NA	NA	NA	NA
WP_000906224.1\|1084424_1084673_+	hypothetical protein	NA	NA	NA	NA
WP_000429703.1\|1084823_1085102_+	hypothetical protein	NA	NA	NA	NA
WP_001574384.1\|1085147_1085414_+	hypothetical protein	NA	NA	NA	NA
WP_000600810.1\|1085410_1085548_+	hypothetical protein	NA	NA	NA	NA
WP_077670291.1\|1085615_1085951_+\|head	phage head morphogenesis protein	A0A1J0MFV1	Staphylococcus_phage	2.6e-27	60.4
WP_001053369.1\|1085957_1086155_+	hypothetical protein	NA	NA	NA	NA
WP_160199979.1\|1086701_1087727_-	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_000435074.1\|1087996_1088194_+	hypothetical protein	NA	NA	NA	NA
WP_001160617.1\|1088250_1089732_+	cardiolipin synthase	NA	NA	NA	NA
WP_001794121.1\|1089905_1090814_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	9.8e-21	27.6
WP_000603961.1\|1090782_1091514_+	ABC transporter permease	NA	NA	NA	NA
WP_000670311.1\|1091517_1092609_+	sensor histidine kinase	NA	NA	NA	NA
WP_000624452.1\|1092605_1093208_+	response regulator transcription factor	NA	NA	NA	NA
WP_001027143.1\|1093320_1093509_-	hypothetical protein	NA	NA	NA	NA
WP_000841344.1\|1093647_1094181_+	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.4e-21	43.5
WP_000011827.1\|1094323_1095178_-	hypothetical protein	NA	NA	NA	NA
WP_001819878.1\|1095508_1096084_+	hypothetical protein	NA	NA	NA	NA
WP_160199980.1\|1096137_1097520_-	aspartate kinase	NA	NA	NA	NA
WP_000735863.1\|1097710_1098991_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_160199981.1\|1098996_1100058_+	threonine synthase	NA	NA	NA	NA
WP_000073177.1\|1100059_1100974_+	homoserine kinase	NA	NA	NA	NA
WP_000186306.1\|1101031_1101835_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_094409958.1\|1101908_1103475_+\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8
WP_000580201.1\|1103789_1104104_-	hypothetical protein	NA	NA	NA	NA
WP_001791424.1\|1104078_1104183_-	hypothetical protein	NA	NA	NA	NA
WP_000389946.1\|1104322_1105777_-	amino acid permease	NA	NA	NA	NA
WP_000089857.1\|1105980_1107498_+	catalase	A0A2K9L0T1	Tupanvirus	2.7e-92	43.8
WP_001265708.1\|1107588_1107738_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_001085657.1\|1108191_1108461_+	30S ribosomal protein S14	NA	NA	NA	NA
WP_000688127.1\|1108617_1109595_+	GMP reductase	Q4ZCY7	Staphylococcus_virus	8.0e-186	99.7
WP_001791425.1\|1109591_1109696_-	hypothetical protein	NA	NA	NA	NA
WP_000380738.1\|1109769_1110633_+	CAP domain-containing protein	U5Q0C0	Bacillus_phage	1.2e-15	41.5
WP_001208760.1\|1111012_1111636_-	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	3.5e-17	63.8

DBSCAN-SWA_75

1115785 : 1116907

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000691309.1\|1115785_1116907_+	exonuclease SbcCD subunit D	A0A1X9I9U0	Staphylococcus_phage	2.1e-09	22.1

DBSCAN-SWA_76

1120576 : 1122223

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001088983.1\|1120576_1122223_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.9e-22	24.5

DBSCAN-SWA_77

1127839 : 1132233

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001574370.1\|1127839_1129831_+	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	8.0e-116	40.5
WP_160199982.1\|1129830_1132233_+	DNA topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	1.1e-92	32.2

DBSCAN-SWA_78

1141502 : 1145068

Staphylococcus_virus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277741.1\|1141502_1143149_-\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0
WP_001123276.1\|1143472_1143658_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_000283027.1\|1143805_1145068_+	Y-family DNA polymerase	O64031	Bacillus_phage	1.7e-95	44.3

DBSCAN-SWA_79

1149386 : 1151739

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000604802.1\|1149386_1149953_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.7e-23	31.8
WP_000153717.1\|1150956_1151739_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-27	36.7

DBSCAN-SWA_80

1159220 : 1159922

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571253.1\|1159220_1159922_-	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	2.0e-13	29.8

DBSCAN-SWA_81

1163336 : 1166790

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000077549.1\|1163336_1165151_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	2.3e-154	47.3
WP_000974850.1\|1165290_1165932_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000079448.1\|1165938_1166790_-	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	6.8e-16	29.7

DBSCAN-SWA_82

1171215 : 1172817

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000942303.1\|1171215_1172817_+	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	5.5e-51	25.7

DBSCAN-SWA_83

1180659 : 1185685

Yellowstone_lake_phycodnavirus(33.33%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216956.1\|1180659_1181925_+	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	4.0e-12	23.0
WP_000876206.1\|1182160_1182562_-	sarA expression modulator protein Msa	NA	NA	NA	NA
WP_000809131.1\|1182758_1182959_-	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	66.2
WP_000269923.1\|1183129_1183438_-	DUF1033 family protein	NA	NA	NA	NA
WP_001215907.1\|1183599_1183869_+	acylphosphatase	NA	NA	NA	NA
WP_001794103.1\|1183887_1184517_+\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_000138413.1\|1184548_1185685_+	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	7.4e-34	28.3

DBSCAN-SWA_84

1189220 : 1190012

Halovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001185421.1\|1189220_1190012_-	MoxR family ATPase	R4TG24	Halovirus	3.3e-12	34.2

DBSCAN-SWA_85

1196380 : 1198392

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000166793.1\|1196380_1197736_-	sensor histidine kinase ArlS	A0A1V0SGX0	Hokovirus	3.5e-14	27.8
WP_000192137.1\|1197732_1198392_-	response regulator transcription factor ArlR	W8CYM9	Bacillus_phage	1.1e-34	33.8

DBSCAN-SWA_86

1201800 : 1211765

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160199987.1\|1201800_1203291_-	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.7e-22	30.5
WP_000121211.1\|1203529_1204477_+\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0
WP_000801007.1\|1204549_1204771_-	hypothetical protein	NA	NA	NA	NA
WP_000473654.1\|1204770_1205271_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_000913317.1\|1205282_1205711_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_000159899.1\|1205703_1206237_-	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000166055.1\|1206322_1207162_-	fatty acid kinase FakB2	A0A0N9SI50	Staphylococcus_phage	5.1e-48	76.5
WP_000175746.1\|1207176_1207656_-	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	2.0e-73	79.9
WP_000934885.1\|1207855_1208812_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.6e-167	85.2
WP_000995290.1\|1209235_1209673_-	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_160199988.1\|1209688_1210321_-	hypothetical protein	NA	NA	NA	NA
WP_001165814.1\|1210358_1210610_-	hypothetical protein	NA	NA	NA	NA
WP_001814377.1\|1210621_1210816_-	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_160199989.1\|1211060_1211765_+	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	1.9e-11	23.3

DBSCAN-SWA_87

1250372 : 1251251

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001133021.1\|1250372_1251251_-	5'-3' exonuclease	S5M4P0	Bacillus_phage	1.4e-19	29.5

DBSCAN-SWA_88

1260715 : 1261342

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001108885.1\|1260715_1261342_+	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5

DBSCAN-SWA_89

1265033 : 1272540

Temperate_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000362222.1\|1265033_1265720_-	DnaD domain-containing protein	Q938N2	Temperate_phage	5.5e-08	32.6
WP_000858795.1\|1266048_1267341_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	4.3e-54	30.0
WP_160199991.1\|1267662_1270356_-	ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000049917.1\|1270379_1271351_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_000361536.1\|1271337_1272540_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.4e-35	42.5

DBSCAN-SWA_90

1275912 : 1276488

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000005208.1\|1275912_1276488_-	IDEAL domain-containing protein	G3MAV7	Bacillus_virus	4.6e-08	27.2

DBSCAN-SWA_91

1280150 : 1285291

Pandoravirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001269937.1\|1280150_1281317_-	chorismate synthase	A0A291AU41	Pandoravirus	1.5e-34	32.3
WP_000442480.1\|1281785_1282235_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_001819897.1\|1282326_1283271_-	heptaprenyl diphosphate synthase subunit II	A0A1V0SE37	Indivirus	1.3e-10	24.4
WP_000774679.1\|1283287_1284013_-	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_000450555.1\|1284015_1284588_-	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_001043863.1\|1285018_1285291_-	DNA-binding protein HU	A7KV42	Bacillus_phage	4.2e-28	73.3

DBSCAN-SWA_92

1294698 : 1297377

Acanthamoeba_polyphaga_moumouvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000902107.1\|1294698_1296078_-	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	2.9e-56	33.3
WP_001163814.1\|1296067_1297021_-	hypothetical protein	NA	NA	NA	NA
WP_001151997.1\|1297128_1297377_+	ferredoxin	A0A127AYY7	Bacillus_phage	8.3e-15	48.0

DBSCAN-SWA_93

1300636 : 1310134

Staphylococcus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723488.1\|1300636_1302814_-	hypothetical protein	B5WZK7	Staphylococcus_phage	1.7e-31	40.5
WP_001574168.1\|1302800_1303733_-	DUF1672 domain-containing protein	NA	NA	NA	NA
WP_000987777.1\|1303984_1305736_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-21	33.6
WP_000064078.1\|1305716_1306442_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-45	43.0
WP_000159577.1\|1306574_1307312_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000368652.1\|1307304_1307847_-	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_160199992.1\|1307839_1308571_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.1e-09	24.6
WP_001183424.1\|1308662_1309169_+	DUF309 domain-containing protein	NA	NA	NA	NA
WP_000447733.1\|1309246_1310134_-	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.6e-37	31.1

DBSCAN-SWA_94

1315798 : 1317283

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000105070.1\|1315798_1317283_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	2.4e-80	37.8

DBSCAN-SWA_95

1324137 : 1327700

Paenibacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094409958.1\|1324137_1325705_-\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8
WP_000193707.1\|1326293_1327700_-	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	4.3e-31	31.1

DBSCAN-SWA_96

1334528 : 1341098

Indivirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001291540.1\|1334528_1335950_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	6.6e-40	26.3
WP_000942216.1\|1336100_1337780_-	DNA repair protein RecN	NA	NA	NA	NA
WP_001124985.1\|1337795_1338248_-	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000183386.1\|1338678_1339560_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	5.8e-10	25.8
WP_000159866.1\|1339537_1339768_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_001286928.1\|1339760_1341098_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.6e-43	37.7

DBSCAN-SWA_97

1348618 : 1351430

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000202178.1\|1348618_1350091_-	glycine dehydrogenase subunit 2	E3SN07	Prochlorococcus_phage	1.4e-80	41.1
WP_000019697.1\|1350083_1351430_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	2.1e-64	39.9

DBSCAN-SWA_98

1356974 : 1357598

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223008.1\|1356974_1357598_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-30	37.1

DBSCAN-SWA_99

1363770 : 1377498

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000863556.1\|1363770_1364370_-	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	9.2e-60	54.7
WP_001095260.1\|1364645_1365056_-	transcriptional repressor	NA	NA	NA	NA
WP_000564316.1\|1365042_1365906_-	metal ABC transporter permease	NA	NA	NA	NA
WP_001213908.1\|1365947_1366733_-	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-19	28.3
WP_000924211.1\|1366858_1367749_-	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.0e-26	33.1
WP_001062173.1\|1367758_1369105_-	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	1.4e-55	34.0
WP_000683921.1\|1369218_1370319_-	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	3.0e-08	30.6
WP_160199994.1\|1370321_1370999_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_001283055.1\|1371129_1372236_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_001217253.1\|1372459_1374259_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.5e-54	36.0
WP_000411298.1\|1374319_1375138_-	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_001794939.1\|1375148_1375772_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001030080.1\|1376106_1377498_+\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	4.7e-46	27.4

DBSCAN-SWA_100

1380552 : 1381500

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001117769.1\|1380552_1381500_-	PhoH family protein	L7TP00	Rhizobium_phage	4.9e-47	46.8

DBSCAN-SWA_101

1387969 : 1391077

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001119020.1\|1387969_1389109_-	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	6.8e-27	26.5
WP_000034716.1\|1389244_1391077_-	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	4.4e-137	46.5

DBSCAN-SWA_102

1394512 : 1400676

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368338.1\|1394512_1396336_-	elongation factor 4	A0A1S5SF82	Streptococcus_phage	6.1e-22	25.1
WP_001274017.1\|1396681_1396933_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_001282570.1\|1396977_1397952_-	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_078061231.1\|1398008_1400156_-	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	9.1e-33	32.2
WP_000439692.1\|1400214_1400676_-	ComE operon protein 2	A7KUY9	Bacillus_phage	3.6e-35	58.8

DBSCAN-SWA_103

1417140 : 1452738

uncultured_Mediterranean_phage(18.75%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000648617.1\|1417140_1417764_-	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1
WP_000848304.1\|1417763_1419032_-	U32 family peptidase	Q6DW11	Phage_TP	4.0e-36	31.7
WP_000137775.1\|1419043_1419967_-	U32 family peptidase	NA	NA	NA	NA
WP_000342267.1\|1419969_1420608_-	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
WP_000134779.1\|1420892_1421201_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_000939059.1\|1421215_1421644_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_000426912.1\|1421647_1421908_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_000734077.1\|1421970_1424601_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.2e-64	34.4
WP_001283316.1\|1424943_1427421_-	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.1e-66	29.0
WP_000567025.1\|1427422_1428091_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_000066097.1\|1428772_1429891_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000409167.1\|1429891_1431034_-	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.3e-33	29.3
WP_000985898.1\|1431343_1432357_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_000008061.1\|1432593_1432740_-	hypothetical protein	NA	NA	NA	NA
WP_000752909.1\|1432779_1432962_-	CsbD family protein	NA	NA	NA	NA
WP_000704122.1\|1433061_1433484_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000102741.1\|1433568_1434843_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	6.3e-106	50.9
WP_000682640.1\|1435003_1435777_-\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_001791215.1\|1435776_1435905_-	hypothetical protein	NA	NA	NA	NA
WP_000044796.1\|1436237_1438004_-\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.3e-16	27.3
WP_000590826.1\|1438019_1439282_-\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000717800.1\|1439742_1440618_-	cell wall amidase	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
WP_000869979.1\|1440614_1441067_-\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_001058583.1\|1441078_1443268_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
WP_160199997.1\|1443695_1444214_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	7.3e-29	46.5
WP_000595001.1\|1444235_1446509_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	6.2e-64	29.3
WP_000749802.1\|1446711_1448991_-	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_001160682.1\|1449265_1449526_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_001112045.1\|1449544_1450684_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
WP_001019178.1\|1450706_1451732_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001005767.1\|1451733_1452738_-	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1

DBSCAN-SWA_104

1462853 : 1465484

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000425358.1\|1462853_1465484_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.4

DBSCAN-SWA_105

1475050 : 1486204

Bacillus_virus(20.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000472293.1\|1475050_1476313_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.1e-139	61.7
WP_000127572.1\|1476463_1477765_-	trigger factor	NA	NA	NA	NA
WP_001790560.1\|1477812_1477923_-	hypothetical protein	NA	NA	NA	NA
WP_001280014.1\|1477927_1478857_-	hypothetical protein	NA	NA	NA	NA
WP_000032653.1\|1478875_1479484_-	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	1.7e-21	36.4
WP_001138360.1\|1479625_1479982_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_001125540.1\|1480028_1480229_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_001791219.1\|1480257_1480785_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	5.3e-11	33.1
WP_000049151.1\|1481013_1482507_-	amino acid permease	NA	NA	NA	NA
WP_000435132.1\|1482933_1484871_-\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	7.8e-116	36.0
WP_016186894.1\|1485095_1485191_-	hypothetical protein	NA	NA	NA	NA
WP_000808621.1\|1485283_1486204_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	8.1e-31	29.4

DBSCAN-SWA_106

1490118 : 1498283

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001114454.1\|1490118_1490991_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	2.6e-42	39.1
WP_001038301.1\|1491006_1493637_-	DNA polymerase I	A8E2B3	Enterococcus_phage	1.8e-46	32.7
WP_000849445.1\|1493929_1495417_-	hypothetical protein	NA	NA	NA	NA
WP_160200048.1\|1495917_1497579_-	PAS domain S-box protein	W8CYF6	Bacillus_phage	1.9e-33	38.6
WP_000080025.1\|1497581_1498283_-	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.6e-07	28.7

DBSCAN-SWA_107

1503166 : 1504924

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001232655.1\|1503166_1504924_-	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	3.3e-41	100.0

DBSCAN-SWA_108

1509856 : 1513054

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000226930.1\|1509856_1513054_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	5.5e-135	30.7

DBSCAN-SWA_109

1530635 : 1534777

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000174275.1\|1530635_1531379_-	glycerophosphoryl diester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	8.3e-18	29.9
WP_000553919.1\|1531458_1531905_+	OsmC family protein	NA	NA	NA	NA
WP_160199998.1\|1532019_1533186_+	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_000808837.1\|1533172_1534777_+	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.2e-114	100.0

DBSCAN-SWA_110

1538545 : 1541176

uncultured_Mediterranean_phage(50.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001279341.1\|1538545_1539820_+\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	1.7e-10	29.0
WP_000186029.1\|1539913_1541176_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.7e-85	42.1

DBSCAN-SWA_111

1547780 : 1549487

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000862086.1\|1547780_1549487_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	4.0e-273	99.4

DBSCAN-SWA_112

1558059 : 1563429

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000118301.1\|1558059_1561884_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.6e-83	47.0
WP_001048374.1\|1561904_1562543_-	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_160199999.1\|1562571_1563429_-	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	2.6e-71	99.3

DBSCAN-SWA_113

1569012 : 1572949

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000690628.1\|1569012_1569606_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.1e-41	51.1
WP_001284656.1\|1569869_1570250_-	penicillinase repressor BlaI	NA	NA	NA	NA
WP_001096374.1\|1570239_1571997_-	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA
WP_000733283.1\|1572103_1572949_+	BlaZ family penicillin-hydrolyzing class A beta-lactamase PC1	A0A1B0VBP7	Salmonella_phage	1.5e-31	34.0

DBSCAN-SWA_114

1581086 : 1651374

Staphylococcus_phage(93.18%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284993.1\|1581086_1582355_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	5.9e-56	99.1
WP_001050519.1\|1582471_1589038_-	LPXTG-anchored repetitive surface protein SasC	A0A2H4PQU6	Staphylococcus_phage	9.2e-294	88.6
WP_000836472.1\|1589361_1589673_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.5e-50	96.1
WP_001108722.1\|1589694_1592109_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	98.8
WP_001025064.1\|1592400_1593582_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	9.6e-218	99.7
WP_000526541.1\|1593691_1594645_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	6.4e-79	99.3
WP_000764425.1\|1594641_1595205_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	1.1e-99	95.7
WP_000757543.1\|1595323_1595725_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000266099.1\|1596297_1597125_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_014937042.1\|1597127_1597247_-	hypothetical protein	NA	NA	NA	NA
WP_001196351.1\|1597358_1598360_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	5.0e-183	99.1
WP_001008556.1\|1598481_1598946_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.9e-68	97.4
WP_001159032.1\|1598958_1600140_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.6e-227	99.7
WP_000493891.1\|1600150_1600783_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	8.4e-112	99.0
WP_001819953.1\|1600789_1601821_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.8e-195	98.3
WP_001261683.1\|1602313_1603816_-	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	5.0e-30	98.6
WP_000221181.1\|1604458_1604773_+	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	1.7e-52	97.1
WP_000989104.1\|1604772_1606065_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	2.6e-216	95.1
WP_001032833.1\|1606151_1607006_-	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000384171.1\|1607281_1607506_-	hypothetical protein	NA	NA	NA	NA
WP_000671059.1\|1607704_1608175_+	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	7.7e-70	85.8
WP_001152695.1\|1608287_1608731_+	competence protein ComK	NA	NA	NA	NA
WP_001030476.1\|1608717_1609161_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-49	77.4
WP_001168914.1\|1609458_1610094_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000492901.1\|1610260_1610881_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001096494.1\|1611338_1612052_-	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_000091444.1\|1612310_1612613_+	hypothetical protein	NA	NA	NA	NA
WP_001200542.1\|1612867_1613233_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
WP_000623481.1\|1613229_1613583_+	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	4.2e-20	97.4
WP_000453316.1\|1613832_1614666_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.2e-158	99.6
WP_000366165.1\|1614877_1615786_-	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	9.8e-138	99.7
WP_000933819.1\|1615910_1617104_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.3e-218	99.5
WP_000109909.1\|1617475_1619068_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	99.8
WP_001801476.1\|1619360_1620107_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	3.3e-139	97.2
WP_000672010.1\|1620111_1620585_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	9.5e-84	98.1
WP_000718107.1\|1620650_1620908_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000778539.1\|1620904_1621906_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	8.5e-183	96.7
WP_000348372.1\|1621910_1623389_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.4e-282	97.2
WP_016186903.1\|1623547_1624003_-	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	3.5e-75	94.5
WP_001794016.1\|1624304_1624955_+	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	1.0e-51	88.4
WP_000070654.1\|1625035_1626031_+	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	3.8e-74	97.2
WP_000669038.1\|1626106_1626733_+	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	4.5e-81	84.1
WP_000627550.1\|1626773_1627118_+	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	5.1e-55	94.7
WP_000414222.1\|1627215_1627788_+	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	3.2e-25	94.8
WP_001093574.1\|1627936_1629304_-	FRG domain-containing protein	NA	NA	NA	NA
WP_000125075.1\|1629303_1629873_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	2.2e-39	54.8
WP_000747804.1\|1630065_1630512_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_001801861.1\|1630962_1631058_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA
WP_001791232.1\|1631180_1631282_+	hypothetical protein	NA	NA	NA	NA
WP_001037039.1\|1631456_1631900_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_000731421.1\|1631899_1632343_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_000182553.1\|1633309_1635730_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA
WP_001819963.1\|1635855_1636215_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_000619920.1\|1636442_1636892_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_001053714.1\|1636934_1638545_+	hypothetical protein	NA	NA	NA	NA
WP_000095390.1\|1638559_1638859_+	secretion protein	NA	NA	NA	NA
WP_000413389.1\|1639120_1640938_-	hypothetical protein	NA	NA	NA	NA
WP_000072622.1\|1640974_1642129_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	7.8e-39	36.3
WP_001794363.1\|1642121_1643861_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	3.2e-286	98.6
WP_001038742.1\|1644040_1644760_-\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.0e-129	98.3
WP_001038734.1\|1644929_1645646_-\|protease	serine protease SplE	A0A2H4PQN5	Staphylococcus_phage	6.6e-129	97.1
WP_001038766.1\|1646691_1647408_-\|protease	serine protease	A0A2H4PQN5	Staphylococcus_phage	5.5e-83	62.6
WP_001039022.1\|1647531_1648251_-\|protease	serine protease SplC	A0A2H4PQP7	Staphylococcus_phage	6.4e-124	93.7
WP_000595635.1\|1649265_1649781_+	membrane protein	NA	NA	NA	NA
WP_000711499.1\|1650027_1651374_+	DUF4041 domain-containing protein	M1NRY5	Streptococcus_phage	2.5e-65	51.1

DBSCAN-SWA_115

1654628 : 1658908

Staphylococcus_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001235656.1\|1654628_1655384_-	staphylococcal enterotoxin type N	A0A075M4C7	Staphylococcus_phage	2.3e-39	40.8
WP_000764684.1\|1655422_1656208_-	staphylococcal enterotoxin type C1/U	A0A097PAT7	Streptococcus_pyogenes_phage	2.9e-45	42.7
WP_000721567.1\|1656361_1657090_-	staphylococcal enterotoxin type I	A0A1X9H080	Staphylococcus_phage	1.3e-28	39.8
WP_000821649.1\|1657124_1657844_-	staphylococcal enterotoxin type M	A0A1X9H080	Staphylococcus_phage	4.9e-23	34.6
WP_147612242.1\|1658125_1658908_-	exotoxin	A0A1X9H080	Staphylococcus_phage	8.7e-34	38.6

DBSCAN-SWA_116

1666771 : 1667512

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216874.1\|1666771_1667512_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-24	29.8

DBSCAN-SWA_117

1677100 : 1677445

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290301.1\|1677100_1677445_-	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7

DBSCAN-SWA_118

1686347 : 1760754

Staphylococcus_phage(82.09%)

head,integrase,capsid,plate,tail,portal,terminase,tRNA,holin

attL 1720697:1720713|attR 1768284:1768300

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000181394.1\|1686347_1686818_-\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_001793998.1\|1686822_1687965_-\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_001144055.1\|1688100_1688829_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7
WP_160200001.1\|1688815_1690273_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_000063551.1\|1690531_1691593_-	PTS transporter subunit IIC	NA	NA	NA	NA
WP_000110011.1\|1700421_1700868_-	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA
WP_000869463.1\|1700964_1701915_-	2-hydroxyacid dehydrogenase	NA	NA	NA	NA
WP_000939530.1\|1701920_1702376_-	peroxiredoxin	NA	NA	NA	NA
WP_001011603.1\|1702456_1703746_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_001236371.1\|1704038_1705133_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000597238.1\|1705323_1707060_-	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4
WP_000251252.1\|1707350_1707893_-	DUF402 domain-containing protein	NA	NA	NA	NA
WP_000284755.1\|1708195_1709233_-	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_000379091.1\|1709384_1710362_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_000886472.1\|1710622_1711459_-	hypothetical protein	NA	NA	NA	NA
WP_000535849.1\|1711467_1712985_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_000435806.1\|1712999_1713314_-	YfhH family protein	NA	NA	NA	NA
WP_001124422.1\|1713291_1714110_-	recombination regulator RecX	NA	NA	NA	NA
WP_000830380.1\|1714370_1715180_-	monofunctional peptidoglycan glycosyltransferase SgtB	NA	NA	NA	NA
WP_000163281.1\|1715520_1716036_-	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_001005407.1\|1716165_1716327_-	hypothetical protein	NA	NA	NA	NA
WP_106875183.1\|1716673_1716754_+	hypothetical protein	NA	NA	NA	NA
WP_160200002.1\|1716821_1717559_-	hypothetical protein	A7YGY5	Staphylococcus_virus	4.5e-133	97.6
WP_000238963.1\|1717565_1718360_-	phosphatidylinositol kinase	Q4ZAU0	Staphylococcus_virus	8.3e-149	100.0
WP_061641004.1\|1718868_1720314_-	CHAP domain-containing protein	A0A0H3U310	Staphylococcus_phage	1.8e-290	97.7
WP_160200003.1\|1720294_1720732_-\|holin	phage holin	S4SVG2	Staphylococcus_phage	9.1e-73	98.6
1720697:1720713	attL	NA	NA	NA	NA
WP_029550581.1\|1720786_1721182_-	hypothetical protein	Q4ZBP5	Staphylococcus_phage	7.9e-68	99.2
WP_098827718.1\|1721187_1722360_-\|plate	BppU family phage baseplate upper protein	A0EWN2	Staphylococcus_virus	2.7e-196	99.2
WP_000524023.1\|1722372_1724271_-	CHAP domain-containing protein	B2ZZ02	Staphylococcus_phage	0.0e+00	99.1
WP_000466778.1\|1724407_1724707_-	DUF2951 domain-containing protein	A0A0H4ITZ0	Staphylococcus_phage	7.6e-47	100.0
WP_000782200.1\|1724746_1724920_-	XkdX family protein	A0A0F6N3L7	Staphylococcus_phage	6.6e-27	100.0
WP_000705896.1\|1724923_1725301_-	DUF2977 domain-containing protein	A0A0F6N3G4	Staphylococcus_phage	1.5e-60	100.0
WP_053868349.1\|1725300_1727124_-\|plate	BppU family phage baseplate upper protein	A0A0H4ISS3	Staphylococcus_phage	0.0e+00	99.8
WP_160200004.1\|1727123_1729034_-	hypothetical protein	A0EWM6	Staphylococcus_virus	0.0e+00	98.9
WP_160200005.1\|1729048_1730950_-	peptidase	Q8SDT5	Staphylococcus_phage	0.0e+00	99.7
WP_000350680.1\|1730958_1731906_-\|tail	phage tail family protein	Q8SDT6	Staphylococcus_phage	2.1e-183	100.0
WP_160200006.1\|1731918_1735386_-	hypothetical protein	Q4ZDU6	Staphylococcus_virus	1.2e-273	97.8
WP_000105584.1\|1735402_1735747_-	hypothetical protein	A0A0F6N3F7	Staphylococcus_phage	2.5e-57	100.0
WP_001100163.1\|1735776_1736142_-	hypothetical protein	Q8SDT9	Staphylococcus_phage	2.8e-59	100.0
WP_000002583.1\|1736203_1736785_-\|tail	phage major tail protein, TP901-1 family	Q8SDU0	Staphylococcus_phage	4.9e-106	100.0
WP_098827722.1\|1736803_1737187_-	hypothetical protein	Q8SDU1	Staphylococcus_phage	5.9e-68	98.4
WP_031925055.1\|1737198_1737546_-	HK97 gp10 family phage protein	B2ZYY9	Staphylococcus_phage	5.9e-59	98.3
WP_001268313.1\|1737545_1737848_-	hypothetical protein	A4ZFB6	Staphylococcus_virus	7.4e-50	99.0
WP_000208960.1\|1737844_1738177_-\|head,tail	phage head-tail connector protein	A0A0F6N3F4	Staphylococcus_phage	5.5e-54	100.0
WP_001114085.1\|1738185_1738473_-	hypothetical protein	S4V6D9	Staphylococcus_phage	4.7e-46	100.0
WP_000438513.1\|1738494_1739469_-\|capsid	phage major capsid protein	S4V686	Staphylococcus_phage	1.7e-183	100.0
WP_000392143.1\|1739482_1740103_-	DUF4355 domain-containing protein	B2ZYY4	Staphylococcus_phage	8.6e-77	99.0
WP_000072202.1\|1740211_1740382_-	hypothetical protein	B2ZYY3	Staphylococcus_phage	6.7e-24	100.0
WP_098827723.1\|1740454_1741450_-\|head	phage head morphogenesis protein	B2ZYY2	Staphylococcus_phage	1.3e-183	99.7
WP_000921897.1\|1741456_1742992_-\|portal	phage portal protein	Q8SDU8	Staphylococcus_phage	9.3e-290	99.2
WP_160200007.1\|1743002_1744280_-\|terminase	PBSX family phage terminase large subunit	Q8SDU9	Staphylococcus_phage	2.1e-247	99.3
WP_001003272.1\|1744266_1744707_-\|terminase	terminase small subunit	Q8SDV0	Staphylococcus_phage	2.8e-74	100.0
WP_000162696.1\|1744893_1745316_-	RinA family phage transcriptional activator	S4V7K2	Staphylococcus_phage	1.6e-74	100.0
WP_000990005.1\|1745339_1745486_-	hypothetical protein	B2ZYX7	Staphylococcus_phage	2.2e-15	100.0
WP_000595244.1\|1745486_1745660_-	transcriptional activator RinB	S4SVE4	Staphylococcus_phage	6.4e-22	100.0
WP_160200008.1\|1745659_1746052_-	hypothetical protein	A0A2I6PDC1	Staphylococcus_phage	2.4e-64	99.2
WP_000483477.1\|1746035_1746272_-	hypothetical protein	A7TWB3	Staphylococcus_phage	1.9e-37	100.0
WP_029727878.1\|1746296_1746476_-	DUF1381 domain-containing protein	C8CH06	Staphylococcus_phage	9.2e-24	98.3
WP_141065319.1\|1746472_1746535_-	DUF1381 domain-containing protein	NA	NA	NA	NA
WP_001061840.1\|1746571_1747105_-	hypothetical protein	Q4ZBS9	Staphylococcus_virus	5.1e-94	98.9
WP_000454994.1\|1747281_1747563_-	hypothetical protein	A0A2I6PDX3	Staphylococcus_phage	8.5e-48	100.0
WP_001065110.1\|1747726_1747978_-	DUF1024 family protein	W5R8J0	Staphylococcus_phage	4.9e-39	100.0
WP_001126839.1\|1747992_1748241_-	hypothetical protein	A0A1W6JPX8	Staphylococcus_phage	2.5e-43	100.0
WP_000029372.1\|1748241_1748601_-	hypothetical protein	A0A0E3T8L4	Staphylococcus_phage	5.9e-62	99.2
WP_000101252.1\|1748728_1749034_-	hypothetical protein	A0A0F6N4H9	Staphylococcus_phage	1.7e-49	100.0
WP_001187250.1\|1749034_1749220_-	DUF3113 family protein	A0A1X9H053	Staphylococcus_phage	1.6e-26	98.4
WP_000049786.1\|1749224_1749629_-	DUF1064 domain-containing protein	Q6R835	Staphylococcus_virus	3.5e-71	98.5
WP_001123688.1\|1749639_1749861_-	DUF3269 family protein	Q9G021	Staphylococcus_phage	1.3e-35	100.0
WP_000256597.1\|1749873_1750032_-	hypothetical protein	Q4ZBL5	Staphylococcus_phage	3.4e-22	100.0
WP_000803070.1\|1750025_1750805_-	ATP-binding protein	A0A1X9H042	Staphylococcus_phage	1.4e-145	100.0
WP_160200009.1\|1750814_1751618_-	replication protein	A0A1X9H0K3	Staphylococcus_phage	8.7e-114	99.6
WP_001644874.1\|1751589_1752282_-	hypothetical protein	A0A1X9H044	Staphylococcus_phage	1.0e-131	100.0
WP_000704705.1\|1752294_1752846_-	single-stranded DNA-binding protein	Q4ZBM4	Staphylococcus_phage	3.4e-101	100.0
WP_001644875.1\|1752874_1753663_-	ATP-binding protein	A0A1X9H046	Staphylococcus_phage	2.6e-142	100.0
WP_000815402.1\|1753655_1753877_-	DUF2483 domain-containing protein	B2ZYV2	Staphylococcus_phage	3.2e-34	100.0
WP_000291089.1\|1753886_1754147_-	DUF1108 family protein	Q4ZBM7	Staphylococcus_phage	1.2e-43	100.0
WP_000066011.1\|1754243_1754405_-	DUF1270 domain-containing protein	Q4ZAZ7	Staphylococcus_virus	2.5e-20	100.0
WP_000594789.1\|1754397_1754619_-	hypothetical protein	B2ZYU8	Staphylococcus_phage	8.7e-32	100.0
WP_000395455.1\|1754689_1754920_+	hypothetical protein	C8CGY3	Staphylococcus_phage	2.3e-35	100.0
WP_000187184.1\|1755110_1755335_-	hypothetical protein	A0A0F6N4M2	Staphylococcus_phage	3.2e-34	100.0
WP_123985805.1\|1755335_1756103_-	phage antirepressor KilAC domain-containing protein	A0A0F6N3N8	Staphylococcus_phage	5.2e-140	98.0
WP_000108121.1\|1756102_1756297_-	helix-turn-helix transcriptional regulator	A0A0F6N3M9	Staphylococcus_phage	6.9e-25	96.9
WP_001055142.1\|1756559_1756892_+	helix-turn-helix transcriptional regulator	R4IH08	Staphylococcus_phage	2.0e-56	98.2
WP_000775189.1\|1756908_1757583_+	ImmA/IrrE family metallo-endopeptidase	A0A0F6N3H6	Staphylococcus_phage	5.2e-120	94.6
WP_000661378.1\|1757611_1758337_+	hypothetical protein	A0A0F6N4L7	Staphylococcus_phage	7.4e-120	95.4
WP_000391592.1\|1758553_1759459_+	hypothetical protein	A0A0F6N3N6	Staphylococcus_phage	1.4e-168	100.0
WP_000143212.1\|1759395_1759596_-	excisionase	Q38044	Staphylococcus_phage	5.6e-30	100.0
WP_015977943.1\|1759707_1760754_+\|integrase	site-specific integrase	Q4ZDS8	Staphylococcus_virus	1.2e-200	100.0
1768284:1768300	attR	NA	NA	NA	NA

DBSCAN-SWA_119

1766783 : 1767413

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153535.1\|1766783_1767413_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-06	30.8

DBSCAN-SWA_120

1772394 : 1772808

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001643743.1\|1772394_1772808_-	hypothetical protein	A0A1Q1PVU5	Staphylococcus_phage	3.0e-17	38.5

DBSCAN-SWA_121

1776261 : 1781289

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000613738.1\|1776261_1776816_+	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	1.2e-29	35.7
WP_000140179.1\|1776882_1777953_-	DNA polymerase IV	NA	NA	NA	NA
WP_000548777.1\|1778199_1778730_-	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_001147874.1\|1778899_1780261_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.5e-102	43.0
WP_001231458.1\|1780341_1781289_-	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.5e-16	27.8

DBSCAN-SWA_122

1788461 : 1795239

Ralstonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000774552.1\|1788461_1790465_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	9.8e-114	36.1
WP_000992924.1\|1790468_1792661_-	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
WP_000272063.1\|1792657_1793350_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_001165363.1\|1793532_1793835_-	hypothetical protein	NA	NA	NA	NA
WP_000572878.1\|1793943_1795239_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9

DBSCAN-SWA_123

1798929 : 1801213

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000040861.1\|1798929_1799751_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.3e-69	52.7
WP_000284434.1\|1799743_1801213_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	8.5e-107	44.5

DBSCAN-SWA_124

1805243 : 1807274

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160200011.1\|1805243_1806341_-	pectate lyase	U5PWM6	Bacillus_phage	8.7e-48	34.6
WP_000149686.1\|1806713_1807274_+	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2

DBSCAN-SWA_125

1811470 : 1811872

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000205106.1\|1811470_1811872_+	YolD-like family protein	U3PG23	Staphylococcus_phage	6.0e-23	42.9

DBSCAN-SWA_126

1817117 : 1875107

Staphylococcus_phage(57.58%)

integrase,protease,transposase,coat,terminase,tRNA

attL 1832123:1832143|attR 1873921:1873941

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000763048.1\|1817117_1817990_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_000645732.1\|1817986_1818667_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000991315.1\|1818667_1819564_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000691584.1\|1819560_1819941_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000681966.1\|1820198_1820375_-	hypothetical protein	NA	NA	NA	NA
WP_000990056.1\|1820616_1820715_-	hypothetical protein	NA	NA	NA	NA
WP_001068528.1\|1820914_1822201_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000277741.1\|1822448_1824095_-\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0
WP_000669728.1\|1824392_1826462_-	MAP domain-containing protein	NA	NA	NA	NA
WP_078100845.1\|1826850_1827843_+	sphingomyelin phosphodiesterase	A0A1P8L6H7	Staphylococcus_phage	5.0e-159	98.9
WP_000595617.1\|1828099_1829119_-	beta-channel forming cytolysin	A0A2I6PEU3	Staphylococcus_phage	3.4e-54	39.6
WP_000791402.1\|1829140_1830196_-	succinyl-diaminopimelate desuccinylase	A0A2I6PER8	Staphylococcus_phage	7.9e-38	34.6
WP_000206618.1\|1830627_1831851_+	ArgE/DapE family deacylase	NA	NA	NA	NA
1832123:1832143	attL	NA	NA	NA	NA
WP_001045073.1\|1832289_1833597_+	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_001573771.1\|1834174_1834516_-	hypothetical protein	C8CH40	Staphylococcus_phage	4.1e-20	46.0
WP_001573769.1\|1834505_1834802_-	hypothetical protein	C8CH40	Staphylococcus_phage	6.7e-11	40.4
WP_000201397.1\|1834798_1834978_-	hypothetical protein	NA	NA	NA	NA
WP_001239269.1\|1836096_1837032_+	TDT family transporter	NA	NA	NA	NA
WP_000812237.1\|1837886_1838114_-	hypothetical protein	A0A2H4JAH5	uncultured_Caudovirales_phage	1.9e-13	47.4
WP_001035597.1\|1838532_1839237_+	toxic shock syndrome toxin TSST-1	NA	NA	NA	NA
WP_001293073.1\|1839391_1839961_-\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	3.5e-101	98.4
WP_000358778.1\|1839957_1840299_-	hypothetical protein	A0A1W6JQM3	Staphylococcus_phage	1.7e-58	100.0
WP_000771368.1\|1840301_1840829_-\|coat	spore coat protein	A0A1W6JQH7	Staphylococcus_phage	3.5e-87	97.1
WP_000448775.1\|1840879_1841098_-	hypothetical protein	NA	NA	NA	NA
WP_000846285.1\|1841115_1841694_-	hypothetical protein	A0A2H4JBG0	uncultured_Caudovirales_phage	1.4e-28	38.4
WP_001190608.1\|1841705_1842047_-	hypothetical protein	Q4ZE66	Staphylococcus_phage	7.1e-57	98.2
WP_001019766.1\|1842582_1843224_-	hypothetical protein	Q4ZE67	Staphylococcus_phage	3.5e-113	94.8
WP_000356937.1\|1843220_1843601_-	hypothetical protein	Q4ZE71	Staphylococcus_phage	6.9e-69	100.0
WP_001002721.1\|1845634_1846504_-	hypothetical protein	Q4ZE74	Staphylococcus_phage	6.0e-169	99.3
WP_001103930.1\|1846567_1846885_-	DUF1474 family protein	A0A1W6JQH0	Staphylococcus_phage	1.6e-18	58.2
WP_000403839.1\|1846885_1847269_-	hypothetical protein	A0A1W6JQI7	Staphylococcus_phage	9.7e-63	96.1
WP_001231378.1\|1847270_1847474_-	hypothetical protein	A0A1W6JQF4	Staphylococcus_phage	7.5e-30	97.0
WP_000708433.1\|1847458_1847614_-	hypothetical protein	NA	NA	NA	NA
WP_000481967.1\|1847610_1847928_-	helix-turn-helix domain-containing protein	A0A1W6JQE0	Staphylococcus_phage	9.2e-51	98.1
WP_000153640.1\|1847932_1848151_-	helix-turn-helix transcriptional regulator	A0A2H4JB11	uncultured_Caudovirales_phage	1.3e-19	66.7
WP_000620857.1\|1848323_1848998_+	helix-turn-helix transcriptional regulator	A0A2H4JGT9	uncultured_Caudovirales_phage	1.6e-39	45.8
WP_000179345.1\|1849011_1850184_+\|integrase	site-specific integrase	A0A1W6JQD3	Staphylococcus_phage	3.5e-220	98.2
WP_000240651.1\|1850252_1851869_-	chaperonin GroEL	A0A240F779	uncultured_virus	2.6e-157	54.7
WP_000917289.1\|1851944_1852229_-	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
WP_000197638.1\|1852403_1853147_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000120330.1\|1853171_1854386_-	hypothetical protein	NA	NA	NA	NA
WP_000522388.1\|1854582_1855209_+	nitroreductase family protein	NA	NA	NA	NA
WP_000867948.1\|1855569_1856355_+	carbon-nitrogen family hydrolase	NA	NA	NA	NA
WP_001549197.1\|1856956_1857091_-	delta-lysin family phenol-soluble modulin	NA	NA	NA	NA
WP_001105709.1\|1857326_1857890_+	accessory gene regulator AgrB	NA	NA	NA	NA
WP_000735197.1\|1857893_1858034_+	cyclic lactone autoinducer peptide	NA	NA	NA	NA
WP_073392933.1\|1858115_1859351_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_000688492.1\|1859369_1860086_+	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	2.3e-25	32.6
WP_001253292.1\|1860459_1861419_-	carbohydrate kinase	NA	NA	NA	NA
WP_001791588.1\|1861415_1862900_-	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	5.2e-19	25.8
WP_000790325.1\|1863048_1863999_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_160200012.1\|1864182_1865433_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	5.8e-40	31.0
WP_000581078.1\|1865641_1865866_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_073392939.1\|1865925_1866954_-	YeeE/YedE family protein	NA	NA	NA	NA
WP_094409958.1\|1867298_1868866_-\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8
WP_001283612.1\|1868973_1869609_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_000602046.1\|1869861_1871790_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L0W2	Tupanvirus	3.2e-53	30.1
WP_001791590.1\|1871934_1872063_-	hypothetical protein	NA	NA	NA	NA
WP_000106312.1\|1872157_1873768_+	MutS family DNA mismatch repair protein	A0A0N9R0S5	Chrysochromulina_ericina_virus	5.1e-20	27.4
WP_000159047.1\|1874081_1875107_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	3.1e-63	40.9
1873921:1873941	attR	NA	NA	NA	NA

DBSCAN-SWA_127

1878867 : 1883591

Yellowstone_lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000047828.1\|1878867_1880637_+	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	4.1e-63	30.1
WP_000196911.1\|1880636_1880891_+	ACT domain-containing protein	NA	NA	NA	NA
WP_072399972.1\|1881012_1882032_+	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000094572.1\|1882061_1883591_+	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	9.4e-08	28.6

DBSCAN-SWA_128

1897704 : 1901088

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001041107.1\|1897704_1898475_-	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	1.3e-21	34.9
WP_001190825.1\|1898449_1898929_-	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001052491.1\|1898930_1899257_-	anti-sigma factor antagonist	NA	NA	NA	NA
WP_000390829.1\|1899375_1900377_-	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_000621176.1\|1900725_1901088_-	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.2e-07	32.8

DBSCAN-SWA_129

1906238 : 1908266

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000546609.1\|1906238_1908266_-	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	3.9e-25	23.6

DBSCAN-SWA_130

1913940 : 1915461

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178940.1\|1913940_1915461_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-58	33.9

DBSCAN-SWA_131

1923653 : 1924301

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001187612.1\|1923653_1924301_+	HD domain-containing protein	H2ED17	Moumouvirus	4.7e-09	27.0

DBSCAN-SWA_132

1930410 : 1930806

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000932696.1\|1930410_1930806_-	single-stranded DNA-binding protein	A0A1B1PAE7	Bacillus_phage	3.0e-14	36.8

DBSCAN-SWA_133

1941465 : 1949218

Catovirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723407.1\|1941465_1942596_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.0e-27	31.1
WP_000048712.1\|1942619_1943249_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_000120494.1\|1943276_1944515_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.2e-103	53.0
WP_000654191.1\|1944541_1945066_-	TIGR01440 family protein	NA	NA	NA	NA
WP_000697334.1\|1945172_1945592_-	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_001801520.1\|1945588_1946686_-	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	3.6e-41	35.6
WP_000248730.1\|1946718_1947555_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_000460244.1\|1947541_1948618_-	peptide chain release factor 1	NA	NA	NA	NA
WP_000273356.1\|1948618_1949218_-	thymidine kinase	G3MBK1	Bacillus_virus	6.2e-32	42.9

DBSCAN-SWA_134

1957021 : 1958632

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159960.1\|1957021_1958632_-	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.7e-146	49.6

DBSCAN-SWA_135

1966565 : 1972379

Geobacillus_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001242308.1\|1966565_1967867_-	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	1.4e-132	58.7
WP_001083335.1\|1968146_1968809_-	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_000160304.1\|1969123_1969834_+	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_160200016.1\|1969954_1970398_-	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	2.8e-37	52.9
WP_001123310.1\|1970597_1971011_-	thiol-disulfide oxidoreductase DCC family protein	NA	NA	NA	NA
WP_000121211.1\|1971431_1972379_+\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0

DBSCAN-SWA_136

1979978 : 1987396

Staphylococcus_virus(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277741.1\|1979978_1981625_+\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0
WP_073392962.1\|1982050_1982155_-	hypothetical protein	NA	NA	NA	NA
WP_001792784.1\|1982834_1982993_+	hypothetical protein	NA	NA	NA	NA
WP_000370937.1\|1983651_1984509_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_000908186.1\|1984576_1985359_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.7e-09	30.1
WP_000334466.1\|1985590_1987396_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1H1Z3	Paramecium_bursaria_Chlorella_virus	2.6e-97	38.6

DBSCAN-SWA_137

2004638 : 2005547

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000162591.1\|2004638_2005547_-	arginase	A0A1V0SJM8	Klosneuvirus	1.2e-26	32.7

DBSCAN-SWA_138

2021346 : 2022315

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989088.1\|2021346_2022315_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.0e-15	28.8

DBSCAN-SWA_139

2032518 : 2034081

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000792332.1\|2032518_2034081_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	3.5e-18	24.6

DBSCAN-SWA_140

2038049 : 2039462

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000169223.1\|2038049_2039462_-	6-phospho-beta-galactosidase	A0A0B5JD41	Pandoravirus	5.0e-48	28.9

DBSCAN-SWA_141

2045781 : 2048844

Orpheovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001573518.1\|2045781_2046522_+	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	7.3e-14	30.3
WP_000333457.1\|2046779_2047388_-	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_001293423.1\|2047401_2047695_-	hypothetical protein	NA	NA	NA	NA
WP_001573519.1\|2047649_2047775_-	hypothetical protein	NA	NA	NA	NA
WP_001015495.1\|2047995_2048844_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.3e-43	38.4

DBSCAN-SWA_142

2052222 : 2060785

Clostridium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001044451.1\|2052222_2053077_-	M23 family metallopeptidase	E5G070	Clostridium_phage	1.3e-06	34.8
WP_000044369.1\|2053287_2054103_-	hydrolase	NA	NA	NA	NA
WP_000769709.1\|2054397_2054823_+	MAP domain-containing protein	NA	NA	NA	NA
WP_000179061.1\|2055213_2055918_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_000130145.1\|2055954_2057619_-	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	4.7e-45	25.9
WP_001791584.1\|2058088_2058271_-	hypothetical protein	NA	NA	NA	NA
WP_000136272.1\|2058920_2059100_-	hypothetical protein	NA	NA	NA	NA
WP_000204271.1\|2059348_2060785_-	MarR family transcriptional regulator	A0A088F7M4	Mycobacterium_phage	5.5e-58	31.2

DBSCAN-SWA_143

2063826 : 2067435

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000586768.1\|2063826_2064687_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	7.4e-10	23.9
WP_000389651.1\|2064683_2065493_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	1.4e-18	30.8
WP_094409958.1\|2065868_2067435_+\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8

DBSCAN-SWA_144

2090615 : 2093783

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000592290.1\|2090615_2093783_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.3e-63	22.0

DBSCAN-SWA_145

2105750 : 2106356

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000913006.1\|2105750_2106356_-	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.8e-13	30.6

DBSCAN-SWA_146

2125329 : 2126139

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000717395.1\|2125329_2126139_+	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	9.4e-07	41.3

DBSCAN-SWA_147

2130059 : 2134326

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000737700.1\|2130059_2130551_+	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	2.0e-07	39.3
WP_000417008.1\|2130909_2131863_+	2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	5.8e-32	29.2
WP_000684154.1\|2131954_2133079_-	NAD(P)-binding protein	A0A2K9L3K5	Tupanvirus	1.6e-12	22.8
WP_072460394.1\|2133687_2134326_-	autolysin	A0A1W6JQU5	Staphylococcus_phage	4.5e-36	47.4

DBSCAN-SWA_148

2147329 : 2147965

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285452.1\|2147329_2147965_-	HAD family hydrolase	A7J6N1	Paramecium_bursaria_Chlorella_virus	7.1e-10	27.6

DBSCAN-SWA_149

2155844 : 2156726

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000730056.1\|2155844_2156726_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	1.7e-62	46.3

DBSCAN-SWA_150

2162417 : 2162837

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000920241.1\|2162417_2162837_+	FosB/FosD family fosfomycin resistance bacillithiol transferase	Q2LI91	Bacillus_phage	7.7e-37	61.9

DBSCAN-SWA_151

2170194 : 2171094

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000524842.1\|2170194_2171094_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	2.7e-15	28.2

DBSCAN-SWA_152

2183750 : 2184959

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000999130.1\|2183750_2184959_-	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	3.0e-33	26.5

DBSCAN-SWA_153

2188696 : 2195253

Planktothrix_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001229922.1\|2188696_2189362_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-37	40.3
WP_000761409.1\|2189361_2190417_-	ABC transporter permease	NA	NA	NA	NA
WP_000249492.1\|2190552_2191227_+	DNA-binding heme response regulator HssR	W8CYM9	Bacillus_phage	8.0e-52	44.7
WP_000477322.1\|2191219_2192593_+	heme sensor histidine kinase HssS	A0A1V0SGX0	Hokovirus	1.1e-12	29.3
WP_000977031.1\|2192755_2193199_+	response regulator transcription factor	NA	NA	NA	NA
WP_000793166.1\|2193195_2193651_+	DUF3021 domain-containing protein	NA	NA	NA	NA
WP_000372857.1\|2193827_2194391_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000388431.1\|2194524_2195253_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.7e-28	33.2

DBSCAN-SWA_154

2205716 : 2206751

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655979.1\|2205716_2206751_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.7e-16	26.2

DBSCAN-SWA_155

2217692 : 2219339

Staphylococcus_virus(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000277741.1\|2217692_2219339_-\|transposase	IS1182-like element ISSau3 family transposase	A0ZS58	Staphylococcus_virus	3.5e-295	100.0

DBSCAN-SWA_156

2230069 : 2231629

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692652.1\|2230069_2231629_-	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_157

2248493 : 2249225

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000615467.1\|2248493_2249225_-	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-23	34.3

DBSCAN-SWA_158

2257118 : 2262873

Staphylococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000594516.1\|2257118_2258048_+	bi-component gamma-hemolysin HlgAB subunit A	A0A2H4PQI5	Staphylococcus_phage	1.5e-120	71.4
WP_000916697.1\|2258598_2259546_+	bi-component gamma-hemolysin HlgCB subunit C	A0A2I6PER8	Staphylococcus_phage	2.1e-138	77.5
WP_001056917.1\|2259547_2260525_+	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	A0A2H4PQH7	Staphylococcus_phage	2.4e-142	76.2
WP_000200947.1\|2260576_2261044_-	QueT transporter family protein	NA	NA	NA	NA
WP_000286868.1\|2261054_2261747_-	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_000971554.1\|2261757_2262873_-	pyridoxal phosphate-dependent aminotransferase family protein	V5LQ39	Emiliania_huxleyi_virus	7.1e-21	24.9

DBSCAN-SWA_159

2266123 : 2273615

Bacillus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000121211.1\|2266123_2267071_-\|transposase	IS30-like element ISSau1 family transposase	Q9MBM9	Staphylococcus_prophage	1.1e-184	100.0
WP_000486505.1\|2267408_2269142_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-30	25.7
WP_001064829.1\|2269166_2270930_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-35	24.7
WP_000482647.1\|2271577_2271685_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_000779351.1\|2271818_2272205_-	GtrA family protein	NA	NA	NA	NA
WP_001176855.1\|2272472_2273615_+	glycerate kinase	W6LM47	Streptococcus_phage	2.6e-55	43.9

DBSCAN-SWA_160

2291991 : 2293218

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948990.1\|2291991_2293218_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-20	50.5

DBSCAN-SWA_161

2296611 : 2301038

Pandoravirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000700902.1\|2296611_2297964_+	carboxylesterase/lipase family protein	A0A0B5J865	Pandoravirus	3.0e-13	34.2
WP_000026190.1\|2298025_2299213_-	MFS transporter	NA	NA	NA	NA
WP_000072154.1\|2299606_2300383_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_000923514.1\|2300375_2301038_-	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.2e-17	34.5

DBSCAN-SWA_162

2307271 : 2308829

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000590515.1\|2307271_2308021_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.1e-21	31.2
WP_000173876.1\|2308013_2308829_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.1e-14	29.8

DBSCAN-SWA_163

2316894 : 2317713

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824929.1\|2316894_2317713_-	SDR family oxidoreductase	L7RG25	Acanthamoeba_polyphaga_moumouvirus	1.9e-10	26.8

DBSCAN-SWA_164

2323389 : 2324085

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000217452.1\|2323389_2324085_-	oxidoreductase	W8CYX9	Bacillus_phage	5.1e-09	36.5

DBSCAN-SWA_165

2328528 : 2335705

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088715.1\|2328528_2331390_-	DUF3427 domain-containing protein	Q5YA94	Bacillus_phage	1.2e-27	27.9
WP_000755954.1\|2331391_2331784_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_001793882.1\|2331900_2333709_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.0e-93	37.5
WP_000678764.1\|2333992_2334259_+	hypothetical protein	NA	NA	NA	NA
WP_001573690.1\|2334402_2334711_+	hypothetical protein	NA	NA	NA	NA
WP_000721330.1\|2334838_2335705_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.4e-79	52.6

DBSCAN-SWA_166

2354302 : 2354998

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000382892.1\|2354302_2354998_+	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-37	37.6

DBSCAN-SWA_167

2364414 : 2365407

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161541.1\|2364414_2365407_+	D-lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	9.7e-38	32.7

DBSCAN-SWA_168

2374231 : 2380614

Powai_lake_megavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001228158.1\|2374231_2375200_-	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	3.1e-12	26.5
WP_000240663.1\|2375320_2375677_-	thioredoxin family protein	NA	NA	NA	NA
WP_000206033.1\|2375718_2376129_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000473682.1\|2376508_2378575_-	PTS glucoside EIICBA component	A0A2I7SAJ6	Vibrio_phage	8.3e-07	43.3
WP_001062662.1\|2378874_2380614_-	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	6.0e-35	24.1

DBSCAN-SWA_169

2387038 : 2390028

Streptococcus_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000262597.1\|2387038_2387560_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.4e-27	42.3
WP_001063330.1\|2387922_2390028_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	6.9e-118	37.5

DBSCAN-SWA_170

2399269 : 2403586

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160200029.1\|2399269_2401678_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.9e-128	40.8
WP_000076662.1\|2402291_2402498_+	copper chaperone CopZ	NA	NA	NA	NA
WP_000161364.1\|2402587_2403586_-	D-lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.6e-35	30.2

DBSCAN-SWA_171

2412025 : 2415224

Salmonella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000379825.1\|2412025_2413837_-	O-acetyltransferase OatA	A0A1R3Y5Q6	Salmonella_virus	1.3e-35	31.5
WP_000751265.1\|2414522_2415224_-	lytic transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	2.1e-39	46.8

DBSCAN-SWA_172

2443379 : 2453490

Klosneuvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000030061.1\|2443379_2444717_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	6.7e-18	26.7
WP_001237625.1\|2444970_2445387_+	hypothetical protein	NA	NA	NA	NA
WP_001031407.1\|2445509_2446400_+	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	1.2e-07	29.2
WP_001130051.1\|2446592_2448089_-	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_001793854.1\|2448515_2448716_+	hypothetical protein	NA	NA	NA	NA
WP_001172333.1\|2448775_2450374_-	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	2.6e-77	36.6
WP_001028789.1\|2450567_2451011_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_000011688.1\|2451290_2451503_-	hypothetical protein	NA	NA	NA	NA
WP_000066521.1\|2451780_2453490_-\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	3.8e-58	32.3

DBSCAN-SWA_173

2458366 : 2460750

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160200030.1\|2458366_2458903_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	5.0e-41	48.0
WP_001071721.1\|2458899_2460750_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.3e-234	63.9

DBSCAN-SWA_174

2465804 : 2466302

Canarypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001065273.1\|2465804_2466302_-	glutathione peroxidase	Q6VZR0	Canarypox_virus	2.4e-21	33.1

DBSCAN-SWA_175

2469722 : 2471473

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000923769.1\|2469722_2470478_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-31	37.9
WP_000143430.1\|2470585_2471473_-	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	3.3e-05	22.5

DBSCAN-SWA_176

2497069 : 2500616

Enterococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001125624.1\|2497069_2498929_+	amidase domain-containing protein	A0A249Y0X5	Enterococcus_phage	4.3e-15	37.3
WP_094409958.1\|2499048_2500616_-\|transposase	IS3-like element ISSau2 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.0e-49	51.8

DBSCAN-SWA_177

2527426 : 2528119

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185863.1\|2527426_2528119_-	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	2.2e-28	38.0

DBSCAN-SWA_178

2540461 : 2541475

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000639194.1\|2540461_2541475_-	histidinol-phosphate aminotransferase family protein	A0A1X7QHI1	Faustovirus	3.7e-08	22.2

DBSCAN-SWA_179

2564124 : 2567546

Lactococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001059079.1\|2564124_2564325_+	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-19	69.8
WP_001054127.1\|2564451_2565021_-	helix-turn-helix transcriptional regulator	D2XQ11	Bacillus_virus	6.2e-05	33.3
WP_000779134.1\|2565280_2565676_-	DUF3147 family protein	NA	NA	NA	NA
WP_000491382.1\|2565743_2566097_-	DUF3147 family protein	NA	NA	NA	NA
WP_000742837.1\|2566706_2567546_-	nucleoid occlusion protein	A0A2K9V477	Faecalibacterium_phage	2.2e-06	23.8

DBSCAN-SWA_180

2577633 : 2586669

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000255586.1\|2577633_2579568_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	5.7e-143	44.9
WP_000819094.1\|2579604_2582265_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	1.0e-118	35.8
WP_000449218.1\|2582352_2583165_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_160200033.1\|2583490_2585005_+	histidine ammonia-lyase	A0A1V0S940	Catovirus	4.4e-90	38.7
WP_000884331.1\|2585382_2586669_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.6e-88	51.2

DBSCAN-SWA_181

2593354 : 2603358

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000375647.1\|2593354_2594755_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.4e-111	48.1
WP_000095328.1\|2595033_2596317_+	adenylosuccinate synthase	L7Y4J5	Megavirus	1.8e-68	34.6
WP_000101976.1\|2597513_2598215_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-42	39.2
WP_000871607.1\|2598227_2600054_+	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
WP_001060137.1\|2600046_2601381_+	hypothetical protein	NA	NA	NA	NA
WP_001104169.1\|2601381_2602170_+	hypothetical protein	NA	NA	NA	NA
WP_000088649.1\|2602557_2603358_+	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	1.0e-37	35.9

DBSCAN-SWA_182

2606944 : 2618266

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000504025.1\|2606944_2608363_+	hypothetical protein	A0A1S5SA14	Streptococcus_phage	1.2e-17	29.3
WP_000858081.1\|2608455_2613195_+	DEAD/DEAH box helicase	A0A2H4UTW8	Bodo_saltans_virus	3.8e-47	27.9
WP_001015148.1\|2613295_2613517_-	hypothetical protein	NA	NA	NA	NA
WP_000849084.1\|2613531_2614035_-	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_000703986.1\|2614050_2614365_-	hypothetical protein	NA	NA	NA	NA
WP_000859154.1\|2614451_2614802_-	hypothetical protein	NA	NA	NA	NA
WP_001186594.1\|2615267_2616896_-	recombinase family protein	A0A0S2SXR4	Bacillus_phage	4.9e-47	28.7
WP_000806249.1\|2616916_2618266_-	recombinase family protein	Q9T200	Bacillus_phage	2.8e-19	25.5

DBSCAN-SWA_183

2622902 : 2623577

Staphylococcus_phage(100.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001106068.1\|2622902_2623577_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	1.3e-123	95.5

DBSCAN-SWA_184

2634147 : 2634783

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000912323.1\|2634147_2634783_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.6e-09	24.5

DBSCAN-SWA_185

2642127 : 2644233

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000766543.1\|2642127_2644233_-	peptidase domain-containing ABC transporter	A0A1V0SE00	Indivirus	3.1e-25	34.2

DBSCAN-SWA_186

2648747 : 2650109

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000725320.1\|2648747_2650109_+	S8 family serine peptidase	A0A2H4PQH1	Staphylococcus_phage	5.7e-57	36.0

DBSCAN-SWA_187

2653403 : 2655307

Staphylococcus_phage(66.67%)

integrase,transposase

attL 2641785:2641800|attR 2657290:2657305

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2641785:2641800	attL	NA	NA	NA	NA
WP_000335382.1\|2653403_2653913_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0C5AEB1	Paenibacillus_phage	8.2e-41	43.9
WP_000251972.1\|2654080_2654191_-\|transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	2.0e-05	95.7
WP_000608675.1\|2654566_2655307_+	exotoxin	A0EX09	Staphylococcus_phage	2.7e-32	37.5
2657290:2657305	attR	NA	NA	NA	NA

DBSCAN-SWA_188

2691851 : 2696061

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000136642.1\|2691851_2692850_-	staphyloferrin B ABC transporter permease subunit SirC	A0A2H4IY97	uncultured_Caudovirales_phage	7.5e-14	27.2
WP_000924992.1\|2692846_2693842_-	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA
WP_001045124.1\|2693857_2694850_-	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA
WP_000570808.1\|2695080_2696061_+	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	2.1e-40	35.6

DBSCAN-SWA_189

2704327 : 2709422

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223717.1\|2704327_2705530_+	staphyloferrin B biosynthesis decarboxylase SbnH	A0A2K9L4I2	Tupanvirus	5.1e-09	21.3
WP_001015549.1\|2705533_2706298_+	bifunctional transcriptional regulator/O-phospho-L-serine synthase SbnI	NA	NA	NA	NA
WP_000414632.1\|2706493_2707120_+	MFS transporter	NA	NA	NA	NA
WP_000183771.1\|2707330_2708107_+	(S)-acetoin forming diacetyl reductase	NA	NA	NA	NA
WP_001793810.1\|2708441_2709422_+	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	1.3e-47	37.3

DBSCAN-SWA_190

2714356 : 2714956

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000874681.1\|2714356_2714956_+	Superoxide dismutase [Mn/Fe] 2	Q56AR7	Bacillus_thuringiensis_phage	7.6e-54	50.2

DBSCAN-SWA_191

2722842 : 2723616

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078278.1\|2722842_2723616_-	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.4e-13	26.1

DBSCAN-SWA_192

2729074 : 2730250

Clostridium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160200039.1\|2729074_2730250_+	ImmA/IrrE family metallo-endopeptidase	A0A0A7RTT7	Clostridium_phage	1.5e-29	27.9

DBSCAN-SWA_193

2734273 : 2740838

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000037317.1\|2734273_2734960_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	8.2e-28	36.1
WP_000565301.1\|2734962_2735727_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_000940769.1\|2735746_2737570_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	3.0e-29	29.4
WP_000459062.1\|2737559_2738588_+	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-41	35.3
WP_001028294.1\|2738600_2739710_+	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_000413167.1\|2739713_2740838_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	3.9e-128	59.6

DBSCAN-SWA_194

2747855 : 2750340

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000779509.1\|2747855_2749118_+	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	2.5e-22	25.5
WP_000723445.1\|2749194_2750340_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	3.2e-24	26.4

DBSCAN-SWA_195

2753681 : 2756680

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001013476.1\|2753681_2754641_+	cation transporter	A0A1V0SED0	Indivirus	2.8e-10	33.6
WP_000356967.1\|2754702_2754906_-	hypothetical protein	NA	NA	NA	NA
WP_000171926.1\|2755085_2755598_+	DUF4242 domain-containing protein	NA	NA	NA	NA
WP_000590840.1\|2755939_2756680_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.5e-39	40.6

DBSCAN-SWA_196

2760216 : 2770500

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000706134.1\|2760216_2761242_+	NAD-dependent formate dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-29	33.9
WP_000826855.1\|2761627_2762878_+	MFS transporter	NA	NA	NA	NA
WP_000605273.1\|2763324_2770500_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	3.4e-68	29.9

DBSCAN-SWA_197

2775358 : 2776543

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001084444.1\|2775358_2776543_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	2.4e-35	29.6

DBSCAN-SWA_198

2792634 : 2794227

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000067363.1\|2792634_2794227_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.4e-22	33.6

DBSCAN-SWA_199

2802038 : 2804097

Pontimonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000166911.1\|2802038_2802617_+	M23 family metallopeptidase	A0A2K9VGT1	Pontimonas_phage	1.6e-13	43.0
WP_000818914.1\|2802999_2804097_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.4e-24	35.6

DBSCAN-SWA_200

2814408 : 2819767

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000127979.1\|2814408_2815965_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.8e-13	27.2
WP_000837114.1\|2815961_2816930_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_000894660.1\|2817517_2819767_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.7e-186	45.1

DBSCAN-SWA_201

2830890 : 2832396

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001008409.1\|2830890_2832396_-	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.7e-38	26.5

DBSCAN-SWA_202

2842081 : 2843611

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000838204.1\|2842081_2843611_-	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	5.3e-11	52.0

DBSCAN-SWA_203

2850827 : 2851871

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000645611.1\|2850827_2851871_+	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	6.0e-14	24.6

DBSCAN-SWA_204

2861740 : 2866284

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000975347.1\|2861740_2863465_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.1e-11	37.4
WP_000608835.1\|2863604_2864279_+	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA
WP_000925396.1\|2864544_2866284_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	2.0e-62	31.5

DBSCAN-SWA_205

2872792 : 2874229

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000163995.1\|2872792_2874229_+	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.3e-30	26.0

DBSCAN-SWA_206

2883036 : 2884698

Arthrobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000736790.1\|2883036_2883987_+	glycine-glycine endopeptidase LytM	V5R8R0	Arthrobacter_phage	1.5e-16	42.7
WP_000570080.1\|2884038_2884698_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.8e-23	32.0

DBSCAN-SWA_207

2895302 : 2899751

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000549309.1\|2895302_2899751_+	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	1.7e-28	23.7

DBSCAN-SWA_208

2913803 : 2914481

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000911024.1\|2913803_2914481_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-31	39.4

DBSCAN-SWA_209

2928654 : 2947718

Staphylococcus_phage(86.05%)

integrase

attL 2916456:2916470|attR 2930297:2930311

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2916456:2916470	attL	NA	NA	NA	NA
WP_000264185.1\|2928654_2929860_-\|integrase	site-specific integrase	A7YGM7	Staphylococcus_virus	2.9e-222	99.8
WP_000191459.1\|2929969_2930584_+	hypothetical protein	A7TW88	Staphylococcus_phage	7.9e-107	100.0
2930297:2930311	attR	NA	NA	NA	NA
WP_001013104.1\|2930580_2930727_-	hypothetical protein	A0A2I6PEK8	Staphylococcus_phage	1.1e-14	89.6
WP_000705240.1\|2930763_2930946_-	hypothetical protein	A0A2I6PDR4	Staphylococcus_phage	5.3e-27	100.0
WP_160200044.1\|2931144_2931915_-	helix-turn-helix domain-containing protein	A0A1X9H0P5	Staphylococcus_phage	8.3e-138	97.7
WP_000338187.1\|2932074_2932296_+	DUF739 family protein	A0A1X9H090	Staphylococcus_phage	7.6e-36	100.0
WP_000435345.1\|2932319_2932766_+	hypothetical protein	A0A1X9H091	Staphylococcus_phage	7.3e-78	99.3
WP_001156085.1\|2932782_2932983_+	hypothetical protein	A7TWL8	Staphylococcus_phage	2.2e-05	51.8
WP_000801112.1\|2932966_2933221_-	hypothetical protein	A7TWL9	Staphylococcus_phage	3.6e-29	76.0
WP_001148541.1\|2933280_2934057_+	transcriptional regulator	A0A2D1G5J2	Staphylococcus_phage	2.2e-122	87.2
WP_160200045.1\|2934070_2934286_+	pathogenicity island protein	Q4ZCA9	Staphylococcus_virus	1.1e-12	58.6
WP_000939500.1\|2934338_2934479_+	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	9.4e-16	95.7
WP_001814660.1\|2934493_2935126_-	hypothetical protein	A7TW95	Staphylococcus_phage	7.6e-105	92.4
WP_001025595.1\|2935181_2935508_+	hypothetical protein	G4KNN2	Staphylococcus_phage	5.4e-54	100.0
WP_001038398.1\|2935504_2935723_+	hypothetical protein	A0A068A2A3	Staphylococcus_phage	8.6e-32	100.0
WP_001124198.1\|2935752_2936016_+	helix-turn-helix domain-containing protein	A0A2I6PEL8	Staphylococcus_phage	2.5e-46	100.0
WP_001837399.1\|2936027_2936198_+	DUF1270 domain-containing protein	E9LT78	Staphylococcus_phage	2.5e-23	100.0
WP_031838381.1\|2936202_2936517_+	hypothetical protein	I1W620	Staphylococcus_phage	4.8e-52	99.0
WP_031871916.1\|2936580_2936841_+	DUF1108 family protein	A1KX65	Staphylococcus_virus	5.8e-43	97.7
WP_000002516.1\|2936855_2937335_+	siphovirus Gp157 family protein	A0A0H4J328	Staphylococcus_phage	1.1e-82	100.0
WP_001288250.1\|2937334_2938108_+	AAA family ATPase	A0ZS20	Staphylococcus_virus	2.1e-141	100.0
WP_000704705.1\|2938137_2938689_+	single-stranded DNA-binding protein	Q4ZBM4	Staphylococcus_phage	3.4e-101	100.0
WP_073396995.1\|2938701_2939394_+	hypothetical protein	A0A1X9H044	Staphylococcus_phage	1.4e-131	99.6
WP_160200009.1\|2939365_2940169_+	replication protein	A0A1X9H0K3	Staphylococcus_phage	8.7e-114	99.6
WP_000803070.1\|2940178_2940958_+	ATP-binding protein	A0A1X9H042	Staphylococcus_phage	1.4e-145	100.0
WP_000256597.1\|2940951_2941110_+	hypothetical protein	Q4ZBL5	Staphylococcus_phage	3.4e-22	100.0
WP_001123688.1\|2941122_2941344_+	DUF3269 family protein	Q9G021	Staphylococcus_phage	1.3e-35	100.0
WP_000049786.1\|2941354_2941759_+	DUF1064 domain-containing protein	Q6R835	Staphylococcus_virus	3.5e-71	98.5
WP_001187250.1\|2941763_2941949_+	DUF3113 family protein	A0A1X9H053	Staphylococcus_phage	1.6e-26	98.4
WP_000101252.1\|2941949_2942255_+	hypothetical protein	A0A0F6N4H9	Staphylococcus_phage	1.7e-49	100.0
WP_000029372.1\|2942382_2942742_+	hypothetical protein	A0A0E3T8L4	Staphylococcus_phage	5.9e-62	99.2
WP_001126839.1\|2942742_2942991_+	hypothetical protein	A0A1W6JPX8	Staphylococcus_phage	2.5e-43	100.0
WP_001065110.1\|2943005_2943257_+	DUF1024 family protein	W5R8J0	Staphylococcus_phage	4.9e-39	100.0
WP_000454994.1\|2943420_2943702_+	hypothetical protein	A0A2I6PDX3	Staphylococcus_phage	8.5e-48	100.0
WP_001061840.1\|2943878_2944412_+	hypothetical protein	Q4ZBS9	Staphylococcus_virus	5.1e-94	98.9
WP_001209216.1\|2944448_2944622_+	hypothetical protein	A0A1W6JQ45	Staphylococcus_phage	4.7e-25	100.0
WP_000195761.1\|2944638_2944875_+	DUF1381 domain-containing protein	M1T303	Staphylococcus_phage	9.6e-37	100.0
WP_000483477.1\|2944899_2945136_+	hypothetical protein	A7TWB3	Staphylococcus_phage	1.9e-37	100.0
WP_000595234.1\|2945128_2945278_+	transcriptional activator RinB	A0A1W6JPZ2	Staphylococcus_phage	6.3e-18	98.0
WP_000265041.1\|2946085_2946286_+	DUF1514 domain-containing protein	R9QT57	Staphylococcus_phage	1.1e-28	100.0
WP_000282748.1\|2946308_2946779_+	hypothetical protein	D2JLE0	Staphylococcus_phage	3.7e-72	100.0
WP_000406186.1\|2946893_2947346_+	nucleoside triphosphate pyrophosphohydrolase family protein	D2JLE1	Staphylococcus_phage	3.3e-70	88.0
WP_102785854.1\|2947361_2947718_+	HNH endonuclease	A0A1J0MFT4	Staphylococcus_phage	6.3e-48	72.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP047782.1|WP_000681966.1|1820198_1820375_-|hypothetical-protein

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Acr_ID: NZ_CP047782.1|WP_000990056.1|1820616_1820715_-|hypothetical-protein

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Acr_ID: NZ_CP047782.1|WP_001791590.1|1871934_1872063_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP047782.1|WP_000681966.1|1820198_1820375_-|hypothetical-protein

1820198_1820375_-

58 aa aa

WHTH_GntR

Identity	Hit_domain_coverage
0.48484848484848486	1.0

1817117-1875107

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047782_9	Orphan	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	1873898-1873873	2

1. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to NZ_CP047782 position: 1873898-1873873, mismatch: 2

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccgcg	Protospacer
************.********** **

NZ_CP047782.1|WP_000990056.1|1820616_1820715_-|hypothetical-protein

1820616_1820715_-

32 aa aa

WHTH_GntR

Identity	Hit_domain_coverage
0.48484848484848486	1.0

1817117-1875107

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047782_9	Orphan	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	1873898-1873873	2

1. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to NZ_CP047782 position: 1873898-1873873, mismatch: 2

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccgcg	Protospacer
************.********** **

NZ_CP047782.1|WP_001791590.1|1871934_1872063_-|hypothetical-protein

1871934_1872063_-

42 aa aa

HTH_21

Identity	Hit_domain_coverage
0.4915254237288136	1.0

1817117-1875107

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047782_9	Orphan	9.1\|2566351\|26\|NZ_CP047782\|CRISPRCasFinder	2566351-2566376	26	1873898-1873873	2

1. spacer 9.1|2566351|26|NZ_CP047782|CRISPRCasFinder matches to NZ_CP047782 position: 1873898-1873873, mismatch: 2

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggccgcg	Protospacer
************.********** **

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047782

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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