CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047790	Staphylococcus aureus strain UP_830 chromosome, complete genome	9 crisprs	csa3,cas3,DinG,DEDDh,WYL	5	5	213	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047790_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_1

88579-88707

Orphan

Consensus_repeat	Method
CAGGTTGGCGGGGCCCCAACAAAGA	PILER-CR
CAGGTTGGCGGGGCCCCAACACAGA	CRISPRCasFinder

2 spacers

DEDDh

The CRISPR arrays of NZ_CP047790_1

>merge|NZ_CP047790|1|88579-88707|PILER-CR,CRISPRCasFinder
CGGGGCCCCAACAAAGAGAATTTCAAAAAAGAAATTCTACAGGCAATACAGGTTGGCGGGGCCCCAACACAGAAGCTGACGAAAAGTCAGCTTACGATAATGTGCAGGTTGGCGGGGCCCCAACATAGA

>NZ_CP047790|1|1|88579-88707|PILER-CR
CGGGGCCCCAACAAAGAGAATTTCA	AAAAAGAAATTCTACAGGCAATACAGGTTGG
CGGGGCCCCAACACAGAAGCTGACG	AAAAGTCAGCTTACGATAATGTGCAGGTTGG
CGGGGCCCCAACATAGA

>NZ_CP047790|1|1|88627-88707|CRISPRCasFinder
CAGGTTGGCGGGGCCCCAACACAGA	AGCTGACGAAAAGTCAGCTTACGATAATGTG
CAGGTTGGCGGGGCCCCAACATAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000949467.1\|83464_83965_-\|H-type-ferritin-FtnA	unknown	unknown	gnl\|CDD\|224445
NZ_CP047790.1\|WP_000153530.1\|91992_92622_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP047790.1\|WP_000180460.1\|95121_95322_+\|DUF1128-family-protein	unknown	unknown	gnl\|CDD\|227177
NZ_CP047790.1\|WP_000636142.1\|88885_89644_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP047790.1\|WP_001789555.1\|95324_96581_+\|aminopeptidase	unknown	unknown	gnl\|CDD\|376723
NZ_CP047790.1\|WP_001790257.1\|86388_86499_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000548781.1\|80606_81137_+\|DUF3267-domain-containing-protein	unknown	unknown	gnl\|CDD\|378690
NZ_CP047790.1\|WP_000228666.1\|94510_94975_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
NZ_CP047790.1\|WP_001790679.1\|83290_83383_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000037079.1\|92733_93951_-\|YihY/virulence-factor-BrkB-family-protein	unknown	unknown	gnl\|CDD\|224214
NZ_CP047790.1\|WP_000428172.1\|94228_94504_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000140181.1\|81383_82454_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|235035
NZ_CP047790.1\|WP_000149064.1\|90261_90963_+\|cell-wall-active-antibiotics-response-protein	unknown	unknown	gnl\|CDD\|227100
NZ_CP047790.1\|WP_001017131.1\|90959_92003_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP047790.1\|WP_001110179.1\|89860_90247_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_025173836.1\|86527_86941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000999714.1\|87371_88358_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP047790.1\|WP_000544965.1\|85571_86303_+\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP047790.1\|WP_001250329.1\|84256_85570_+\|Mur-ligase-family-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP047790.1\|WP_160194974.1\|82520_83075_-\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99834

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000949467.1\|83464_83965_-\|H-type-ferritin-FtnA	gnl\|CDD\|224445	COG1528, Ftn, Ferritin-like protein [Inorganic ion transport and metabolism].	4.6035e-74
NZ_CP047790.1\|WP_000153530.1\|91992_92622_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.91794e-79
NZ_CP047790.1\|WP_000180460.1\|95121_95322_+\|DUF1128-family-protein	gnl\|CDD\|227177	COG4840, COG4840, Uncharacterized protein conserved in bacteria [Function unknown].	9.24488e-25
NZ_CP047790.1\|WP_000636142.1\|88885_89644_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.9498e-126
NZ_CP047790.1\|WP_001789555.1\|95324_96581_+\|aminopeptidase	gnl\|CDD\|376723	pfam02073, Peptidase_M29, Thermophilic metalloprotease (M29).	0
NZ_CP047790.1\|WP_000037079.1\|92733_93951_-\|YihY/virulence-factor-BrkB-family-protein	gnl\|CDD\|224214	COG1295, Rbn, Ribonuclease BN family enzyme [Replication, recombination, and repair].	3.59491e-85
NZ_CP047790.1\|WP_000544965.1\|85571_86303_+\|type-1-glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	2.14444e-120
NZ_CP047790.1\|WP_000228666.1\|94510_94975_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	3.39151e-65
NZ_CP047790.1\|WP_000140181.1\|81383_82454_+\|DNA-polymerase-IV	gnl\|CDD\|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	0
NZ_CP047790.1\|WP_000149064.1\|90261_90963_+\|cell-wall-active-antibiotics-response-protein	gnl\|CDD\|227100	COG4758, COG4758, Predicted membrane protein [Function unknown].	9.42019e-79
NZ_CP047790.1\|WP_001017131.1\|90959_92003_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	6.78722e-72
NZ_CP047790.1\|WP_000999714.1\|87371_88358_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	5.31001e-76
NZ_CP047790.1\|WP_000548781.1\|80606_81137_+\|DUF3267-domain-containing-protein	gnl\|CDD\|378690	pfam11667, DUF3267, Putative zincin peptidase. This family of proteins has a conserved HEXXH motif, suggesting the members are putative peptidases of zincin fold.	1.4991e-11
NZ_CP047790.1\|WP_001250329.1\|84256_85570_+\|Mur-ligase-family-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	3.37755e-99
NZ_CP047790.1\|WP_160194974.1\|82520_83075_-\|3'-5'-exonuclease	gnl\|CDD\|99834	cd06130, DNA_pol_III_epsilon_like, an uncharacterized bacterial subgroup of the DEDDh 3'-5' exonuclease domain family with similarity to the epsilon subunit of DNA polymerase III. This subfamily is composed of uncharacterized bacterial proteins with similarity to the epsilon subunit of DNA polymerase III (Pol III), a multisubunit polymerase which is the main DNA replicating enzyme in bacteria, functioning as the chromosomal replicase. The Pol III holoenzyme is a complex of ten different subunits, three of which (alpha, epsilon, and theta) compose the catalytic core. The Pol III epsilon subunit, encoded by the dnaQ gene, is a DEDDh-type 3'-5' exonuclease which is responsible for the proofreading activity of the polymerase, increasing the fidelity of DNA synthesis. It contains three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The epsilon subunit of Pol III also functions as a stabilizer of the holoenzyme complex.	2.85421e-75

>NZ_CP047790.1|WP_000999714.1|87371_88358_-|aromatic-acid-exporter-family-protein
MNDQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQELILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHLLYEVLMIYRLLDSRYA
>NZ_CP047790.1|WP_025173836.1|86527_86941_+|hypothetical-protein
MKPTKVILRDASYLHSKTSITFILKDVVIEEDNKIYYFDTSATFEDQEVKFEFALFDSDMDNLKHMDYDNPVTEIYFIEPDLHFTIIDFNQELLCIYIDFDSGLRHSNMATESGISLRINVAKSDFTKFINELASLY
>NZ_CP047790.1|WP_001790257.1|86388_86499_+|hypothetical-protein
MDGNNQIDVCFFVLVNNYYTMSIYPRIINSNGDYAT
>NZ_CP047790.1|WP_000544965.1|85571_86303_+|type-1-glutamine-amidotransferase
MHELTIYHFMSDKLNLYSDIGNIIALRQRAKKRNIKVNVVEINETEGITFDECDIFFIGGGSDREQALATKELSKIKTPLKEAIEDGMPGLTICGGYQFLGKKYITPDGTELEGLGILDFYTESKTNRLTGDIIIESDTFGTIVGFENHGGRTFHDFGTLGHVTFGYGNNDEDKKEGIHYKNLLGTYLHGPILPKNYEITDYLLEKACERKGIPFEPKEIDNEAEIQAKQVLIDRANRQKKSR
>NZ_CP047790.1|WP_001250329.1|84256_85570_+|Mur-ligase-family-protein
MRQWTAIHLAKLARKASRAVGKRGTDLPGQIARKVDTDILRKLAEQVDDIVFISGTNGKTTTSNLIGHTLKANNIQIIHNNEGANMAAGITSAFIMQSTPKTKIAVIEIDEGSIPRVLKEVTPSMMVFTNFFRDQMDRFGEIDIMVNNIAETISNKGIKLLLNADDPFVSRLKIASDTIVYYGMKAHAHEFEQSTMNESRYCPNCGRLLQYDYIHYNQIGHYHCQCGFKREQAKYEISSFDVAPFLHLNINDEKYDMKIAGDFNAYNALAAYSVLRELGLNEQTIKNGFETYTSDNGRMQYFKKERKEAMINLAKNPAGMNASLSVGEQLEGEKVYVISLNDNAADGRDTSWIYDADFEKLSKQQIEAIIVTGTRAEELQLRLKLAEVEVPIIVERDIYKATAKTMDYKGFTVAIPNYTSLAPMLEQLNRSFEGGQS
>NZ_CP047790.1|WP_000949467.1|83464_83965_-|H-type-ferritin-FtnA
MLSKNLLEALNDQMNHEYFAAHAYMAMAAYCDKESYEGFANFFIQQAKEERFHGQKIYNYINDRGAHAEFRAVSAPKIDFSSILETFKDSLSQEQEVTRRFYNLSEIARQDKDYATISFLNWFLDEQVEEESMFETHINYLTRIGDDSNALYLYEKELGARTFDEE
>NZ_CP047790.1|WP_001790679.1|83290_83383_+|hypothetical-protein
MTKNTIISLENEKTQINDSENESSDLRKAK
>NZ_CP047790.1|WP_160194974.1|82520_83075_-|3'-5'-exonuclease
MIQDAFVALDFETANGKRASICSVGMVKVIDSQITETFHTLVNPQDYFSQQNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQSIQNIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALNDAKACAMITFRLLKNYENLTYVTNIYGKNLKDKG
>NZ_CP047790.1|WP_000140181.1|81383_82454_+|DNA-polymerase-IV
MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEARKYGVYSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVEPMSLDEAYLDITELVRPDLPASKIAQYIRKDILEKTHLTASAGVSYNKFLAKLASGMNKPDGMTVIDYQNVHDILMTLDIGEFPGVGKASKKVMHDNGIFNGRDLYEKTEFELIRLFGKRGRGLYNKARGIDHSEVKSSRVRKSVGTERTFATDVNDDEEILRKVWELSGKTAERLNKLQKSAKTVTVKIKTYQFETLSKQMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRLIGVTVGNLEQSTYKNMTIYDFI
>NZ_CP047790.1|WP_000548781.1|80606_81137_+|DUF3267-domain-containing-protein
MHKIDLTTNNFQMRRFIILQLVIALFVILFTYKWALGVTAVVDQNIIINLVYGFAGFIILLILHELIHRALFLLFKKDSKPMFNIKKDRILFQTADACFNKWQFSIIMLSPLILLSTGLLILIKVFGYSSLIFMFSMHTAYCFIDILLVALTISSSFKYVQQDEDSIYLYHQKPTQ
>NZ_CP047790.1|WP_000636142.1|88885_89644_+|type-I-methionyl-aminopeptidase
MIVKTEEELQALKEIGYICAKVRNTMQAATKPGITTKELDNIAKELFEEYGAISAPIHDENFPGQTCISVNEEVAHGIPSKRVIREGDLVNIDVSALKNGYYADTGISFVVGESDDPMKQKVCDVATMAFENAIAKVKPGTKLSNIGKAVHNTARQNDLKVIKNLTGHGVGLSLHEAPAHVLNYFDPKDKTLLTEGMVLAIEPFISSNASFVTEGKNEWAFETSDKSFVAQIEHTVIVTKDGPILTTKIEEE
>NZ_CP047790.1|WP_001110179.1|89860_90247_+|hypothetical-protein
MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITKKEQLSKLIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQIETQIQQTSTEKIATEKTSYLINYMNAVA
>NZ_CP047790.1|WP_000149064.1|90261_90963_+|cell-wall-active-antibiotics-response-protein
MTHKYISTQMLIIFTALMIIANFYYIFFEKIGFLLVLLLGCVLVYVGYLYFHKIRGLLAFWIGALLIAFTLLSNKYTIIILFVFLLLLIVRYLIHKFKPKKVVATDEVMTSPSFIKQKWFGEQRTPVYVYKWEDVQIQHGIGDLHIDLTKAANIKENNTIVVRHILGKVQVILPVNYNINLHVAAFYGSTYVNEKSYKVENNNIHIEEMMKPDNYTVNIYVSTFIGDVEVIYR
>NZ_CP047790.1|WP_001017131.1|90959_92003_+|sensor-histidine-kinase
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKTQIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVSQQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEIQDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGATFHIVSLPDSGTRIEVKAPLNKEDSYDD
>NZ_CP047790.1|WP_000153530.1|91992_92622_+|response-regulator-transcription-factor
MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLIQ
>NZ_CP047790.1|WP_000037079.1|92733_93951_-|YihY/virulence-factor-BrkB-family-protein
MSKKDHSSSKYLNSVKEAQEESKKKNKSNPKIDVDRTYIEPQQFQSKKPKKDDQVFFLSRLNKPAKYKKDSNFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLLFLLTLLPFFNIKQSQITNMLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIIIFIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGIIILLLWLYITSFIIIVGAEINAIIHQRSVIKGKTPEEAALEHDDNNKNHYNENTRYEYDEDSNATHQRTYHVDEHPSDTYPEDDKNIKDKIVDKLKKD
>NZ_CP047790.1|WP_000428172.1|94228_94504_-|hypothetical-protein
MENKFVPGILIGAVIGGAISLADKSTRQALVQSVKDAKNGNRTRKPSKVSKIKDEVLYWKDVVEEIRRNNPELERSLKDAKETFVNRKNQR
>NZ_CP047790.1|WP_000228666.1|94510_94975_-|low-molecular-weight-phosphotyrosine-protein-phosphatase
MVDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSWNLGEPPHEGTQKILNKHNIPFDGMISELFEATDDFDYIVAMDQSNVDNIKSINPNLKGQLFKLLEFSNMEESDVPDPYYTNNFEGVYDMVLSSCDNLIDYIVKDANLKEG
>NZ_CP047790.1|WP_000180460.1|95121_95322_+|DUF1128-family-protein
MTNEEKVLAIREKLNIVNQGLLDPEKYKNANEEELTDIYDFVQSRERLSPSEVTAIADALGQLRHD
>NZ_CP047790.1|WP_001789555.1|95324_96581_+|aminopeptidase
MGILTNYKEKLQQYAELLVKVGMNVQPKQPVFIRSSVETLELTHLIVEEAYHCGASDVRVVYSDPTLKRLKFENESVEHFANHELKSYDVEARMDYVKRGAANLALISEDPDLMDGIDSQKLQAFQQQNARAFKGYMESVQKNQFPWVVAAFPSKAWAKRVYPELSVEEAYIKFIDEVFDIVRIDGNDPVENWRQHIANLSVYAQKLQQKNYHALHYVSEGTDLTVGLAKNHIWEDATSYVNGKEQAFIANIPTEEVFTAPDRNRVDGYVTNKLPLSYNGTIIDQFKLMFKDGEIIDFSAEKGEAVLKDLINTDEGSRRLGEVALVPDDSPISNRNTIFYNTLFDENAACHLAIGSAYAFNIQGGTEMTVEEKIASGLNDSNVHVDFMIGSSDLTIYGIFEDGSKELVFENGNWASTF

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Crispr_ID: NZ_CP047790_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_2

892291-892376

Orphan

Consensus_repeat	Method
CCAACTTGCACATTATTGTAAGCTGACTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_2

>merge|NZ_CP047790|2|892291-892376|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTTCCGCCAGCTTCTATGTTGGGGCCCCGCCAACTTGCACATTATTGTAAGCTGACTTT

>NZ_CP047790|2|2|892291-892376|CRISPRCasFinder
CCAACTTGCACATTATTGTAAGCTGACTTT	CCGCCAGCTTCTATGTTGGGGCCCCG
CCAACTTGCACATTATTGTAAGCTGACTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_031775077.1\|899390_899462_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001074342.1\|887351_888284_-\|carbamate-kinase	unknown	unknown	gnl\|CDD\|237071
NZ_CP047790.1\|WP_001032814.1\|895850_896036_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_086037085.1\|885623_887129_-\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP047790.1\|WP_001239286.1\|883837_884785_+\|TDT-family-transporter	unknown	unknown	gnl\|CDD\|187765
NZ_CP047790.1\|WP_000739572.1\|899014_899410_+\|formyl-peptide-receptor	unknown	unknown	gnl\|CDD\|171849
NZ_CP047790.1\|WP_020978131.1\|894995_895229_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000335234.1\|891398_892115_+\|superantigen-like-protein-SSL12	unknown	unknown	gnl\|CDD\|171995
NZ_CP047790.1\|WP_000584398.1\|897835_898342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000791580.1\|897079_897577_-\|fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|289007
NZ_CP047790.1\|WP_001245802.1\|883400_883589_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225382
NZ_CP047790.1\|WP_000739541.1\|889745_890471_+\|superantigen-like-protein-SSL14	unknown	unknown	gnl\|CDD\|171855
NZ_CP047790.1\|WP_000857488.1\|893559_894519_+\|beta-channel-forming-cytolysin	unknown	unknown	gnl\|CDD\|273388
NZ_CP047790.1\|WP_000398672.1\|880384_880519_-\|beta-class-phenol-soluble-modulin	unknown	unknown	gnl\|CDD\|368464
NZ_CP047790.1\|WP_001063558.1\|890565_891291_+\|superantigen-like-protein-SSL13	unknown	unknown	gnl\|CDD\|106307
NZ_CP047790.1\|WP_000149423.1\|885089_885317_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000765708.1\|892740_892887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000669537.1\|896575_896926_-\|complement-inhibitor-SCIN-B	unknown	unknown	gnl\|CDD\|371594
NZ_CP047790.1\|WP_001802045.1\|892559_892784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000793607.1\|888306_889308_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|235269

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_001074342.1\|887351_888284_-\|carbamate-kinase	gnl\|CDD\|237071	PRK12353, PRK12353, putative amino acid kinase; Reviewed.	0
NZ_CP047790.1\|WP_086037085.1\|885623_887129_-\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	0
NZ_CP047790.1\|WP_001239286.1\|883837_884785_+\|TDT-family-transporter	gnl\|CDD\|187765	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. This subfamily contains bacterial C4-dicarboxylate transporters, which is part of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family. It includes Tellurite resistance protein tehA; the tehA gene encodes an integral membrane protein that has been shown to have efflux activity of quaternary ammonium compounds. TehA protein of Escherichia coli functions as a tellurite-resistance uptake permease.	7.21166e-84
NZ_CP047790.1\|WP_000739572.1\|899014_899410_+\|formyl-peptide-receptor	gnl\|CDD\|171849	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed.	1.17946e-62
NZ_CP047790.1\|WP_000335234.1\|891398_892115_+\|superantigen-like-protein-SSL12	gnl\|CDD\|171995	PRK13350, PRK13350, superantigen-like protein; Reviewed.	5.01863e-153
NZ_CP047790.1\|WP_000791580.1\|897079_897577_-\|fibrinogen-binding-protein	gnl\|CDD\|289007	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal. This domain family is found in bacteria, and is approximately 70 amino acids in length. There is a conserved VLK sequence motif. It is the C terminal domain of bacterial extracellular fibrinogen binding protein. It contains a helical motif involved in complement regulation. This motif binds to complement and changes its conformation to a form which cannot activate downstream components of the complement cascade.	5.38388e-27
NZ_CP047790.1\|WP_001245802.1\|883400_883589_-\|hypothetical-protein	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	0.00787195
NZ_CP047790.1\|WP_000739541.1\|889745_890471_+\|superantigen-like-protein-SSL14	gnl\|CDD\|171855	PRK13043, PRK13043, superantigen-like protein; Reviewed.	1.59495e-161
NZ_CP047790.1\|WP_000857488.1\|893559_894519_+\|beta-channel-forming-cytolysin	gnl\|CDD\|273388	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin. This family of cytolytic pore-forming proteins includes alpha toxin and leukocidin F and S subunits from Staphylococcus aureus, hemolysin II of Bacillus cereus, and related toxins. [Cellular processes, Toxin production and resistance].	1.66722e-141
NZ_CP047790.1\|WP_000398672.1\|880384_880519_-\|beta-class-phenol-soluble-modulin	gnl\|CDD\|368464	pfam05480, Staph_haemo, Staphylococcus haemolytic protein. This family consists of several different short Staphylococcal proteins, it contains SLUSH A, B and C proteins as well as haemolysin and gonococcal growth inhibitor. Some strains of the coagulase-negative Staphylococcus lugdunensis produce a synergistic hemolytic activity (SLUSH), phenotypically similar to the delta-hemolysin of S. aureus. Gonococcal growth inhibitor from Staphylococcus act on the cytoplasmic membrane of the gonococcal cell causing cytoplasmic leakage and, eventually, death.	6.35158e-13
NZ_CP047790.1\|WP_001063558.1\|890565_891291_+\|superantigen-like-protein-SSL13	gnl\|CDD\|106307	PRK13349, PRK13349, superantigen-like protein; Reviewed.	2.07034e-148
NZ_CP047790.1\|WP_000669537.1\|896575_896926_-\|complement-inhibitor-SCIN-B	gnl\|CDD\|371594	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN. SCIN is released by Staphylococcus aureus to counteract the host immune defense. The protein binds to and inhibits C3 convertases on the bacterial surface, reducing phagocytosis and blocking downstream effector functions by C3b deposition on its surface. An 18 residue stretch 31-48 is crucial for SCIN activity.	2.0882e-48
NZ_CP047790.1\|WP_000793607.1\|888306_889308_-\|ornithine-carbamoyltransferase	gnl\|CDD\|235269	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional.	0

>NZ_CP047790.1|WP_000335234.1|891398_892115_+|superantigen-like-protein-SSL12
MCKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHFSFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKDKDTDQLWWSYRETFTGGVTPAAKPSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFRAREALIKNKILYNENRNKGKLKITGGGNNYTIDLSKRLHSDLANVYVKNPNKITVDVLFD
>NZ_CP047790.1|WP_001063558.1|890565_891291_+|superantigen-like-protein-SSL13
MNNNITKKIILSTTLLLLGTASTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTIHATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGIKDHETIDSFALSQETFTGGVTPAATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYNNSYNKGQIKITGADNNYTIDLSKRLPSTDANRYVKKPQNAKIEVILEKSN
>NZ_CP047790.1|WP_000739541.1|889745_890471_+|superantigen-like-protein-SSL14
MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHLSLSNKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEGYWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIRQTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPKNAQIEVILEKSN
>NZ_CP047790.1|WP_000793607.1|888306_889308_-|ornithine-carbamoyltransferase
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
>NZ_CP047790.1|WP_001074342.1|887351_888284_-|carbamate-kinase
MAKIVVALGGNALGKSPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIKTLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNELDAALEGKVGTVIKK
>NZ_CP047790.1|WP_086037085.1|885623_887129_-|YfcC-family-protein
MPGAFMILFILTVVAVIATWVIPAGAYSKLSYEPSSQELKIVNPHNQVKKVPGTQQELDKMGVKIKIEQFKSGAINKPVSIPNTYERLKQHPAGPEQITSSMVEGTIEAVDIMVFILVLGGLIGVVQASGSFESGLLALTKKTKGHEFMLIVFVSILMIIGGTLCGIEEEAVAFYPILVPIFIALGYDSIVSVGAIFLASSVGSTFSTINPFSVVIASNAAGTTFTDGLYWRIGACIVGAIFVISYLYWYCKKIKKDPKASYSYEDKDAFEQQWSVLKDDDSAHFTLRKKIILTLFVLPFPIMVWGVMTQGWWFPVMASAFLIFTIIIMFIAGTGKSGLGEKGTVDAFVNGASSLVGVSLIIGLARGINLVLNEGMISDTILHFSSSLVQHMSGPLFIIVLLFIFFCLGFIVPSSSGLAVLSMPIFAPLADTVGIPRFVIVTTYQFGQYAMLFLAPTGLVMATLQMLNMRYSHWFRFVWPVVAFVLIFGGGLLITQVLIYS
>NZ_CP047790.1|WP_000149423.1|885089_885317_-|hypothetical-protein
MTHLTKVLDTLTGICVVLLFSKYFVAYANMVFDWNLRWYLLENIPHLPIILFILMFIFGVPSEMIKDRQRKNNGV
>NZ_CP047790.1|WP_001239286.1|883837_884785_+|TDT-family-transporter
MRLQKAPLVTSGLVLGLLGLGNLLKDLSLTLNAVCGIFAFLIWIHLLCTMIKYFNNVKEQLNSPLVSSVFTTFFMSGFLGTTYLNTFFSNITFINSLITPIWILCLVGIMTHMIIFSIKYLKDFSLENVYPSWTVLFIGIAIAGLTAPVSGYFFIGQLTVIYGFVATCIVLPIVFKRLKAFPLQTSIKPNTSTICAPFSLVAAAYVIAFPKANAFIVIIFLLLAQIFYFYIIIQLPKLLKEPFSPVFSAFTFPLVISATALKNSLPVLMFPDIWKGLLFIEVLLATVIVLRVFIGYLHFFLKKENQDKFLRNASQ
>NZ_CP047790.1|WP_001245802.1|883400_883589_-|hypothetical-protein
MRNQIQKLLDSDLSSLHISKQTGVPQSTIHRMRKNERSLDNMSLKNAELLYKFANSIFSNEN
>NZ_CP047790.1|WP_000398672.1|880384_880519_-|beta-class-phenol-soluble-modulin
MEGLFNAIKDTVTAAINNDGAKLGTSIVSIVENGVGLLGKLFGF
>NZ_CP047790.1|WP_001802045.1|892559_892784_-|hypothetical-protein
MLIQERGLKMTELNNIINSLQSLFESESGYKISKNSGVPYQTVQDLRNGKTKLEDARFRTIIKLYSYYVSLKEH
>NZ_CP047790.1|WP_000765708.1|892740_892887_-|hypothetical-protein
MKLFYIVFLIIIWLNIFLGNEIIHTLTVLITTLYIVNSRKGIKNDRVE
>NZ_CP047790.1|WP_000857488.1|893559_894519_+|beta-channel-forming-cytolysin
MKTRIVSSVTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMHKKVFYSFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISDYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYERVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN
>NZ_CP047790.1|WP_020978131.1|894995_895229_+|hypothetical-protein
MVFNDWEINVVYSGEHEVVANEKSLFVIDEFYDVAIAIYYLDGKLKVAHVNYGSDFTIDVANKVFELNIKNPNVDEH
>NZ_CP047790.1|WP_001032814.1|895850_896036_+|hypothetical-protein
MNKHINKKAAKLLEDYKKVQQRKSKETDRGCLKSVIMLIVLFFLIIFGIVACSTNVNFFFQ
>NZ_CP047790.1|WP_000669537.1|896575_896926_-|complement-inhibitor-SCIN-B
MKFKKYILTGTLALLLSSTGIATIEGNKADASSLDKYLTESQFHDKRIAEELRTLLNKSNVYALAAGSLNPYYKRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKEIDEIINR
>NZ_CP047790.1|WP_000791580.1|897079_897577_-|fibrinogen-binding-protein
MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVK
>NZ_CP047790.1|WP_000584398.1|897835_898342_-|hypothetical-protein
MIIKILTILLLLCILSYLVTNRKKPFLFLKTLFMGVVFIFIGYISLAISAVIIYGIIQFITIDFGSFFLMGIILILISSIFQLFIVRLLFRKKNVDLTEVVVLEHLIQWFLVYFAIYQAVNEKMDINDINIDNFQSVFFDVSNLNLVILPTLIISWVTIFNYRMRSYK
>NZ_CP047790.1|WP_000739572.1|899014_899410_+|formyl-peptide-receptor
MKKNITKVIIASTVIATGLLTHSNDAKAFFSYEWKGLEIAKKLADDEKKDEERADRLIKDAEKERTYTGKTVEDLYVIAKKLGKGNTIAVVRIIDGGKNGYYTFDITRPLEEHRKNIKVVAKGEIDSITWY
>NZ_CP047790.1|WP_031775077.1|899390_899462_+|hypothetical-protein
MRLLGIKKHTELNSCTPNVRKQC

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Crispr_ID: NZ_CP047790_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_3

915122-915213

Orphan

Consensus_repeat	Method
CCTCTTTGATTTTTAATCATTAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_3

>merge|NZ_CP047790|3|915122-915213|CRISPRCasFinder
CCTCTTTGATTTTTAATCATTAGAGGCTTTTATGCAGTGATGCGAAGCATCATCTGTATTCCGCTGTTCCTCTTTGATTTTTAATCATTATG

>NZ_CP047790|3|3|915122-915213|CRISPRCasFinder
CCTCTTTGATTTTTAATCATTAGA	GGCTTTTATGCAGTGATGCGAAGCATCATCTGTATTCCGCTGTT
CCTCTTTGATTTTTAATCATTATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_001788625.1\|908245_908341_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001249293.1\|908890_911239_-\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_CP047790.1\|WP_000818276.1\|903542_905309_-\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236319
NZ_CP047790.1\|WP_000435372.1\|919404_920145_-\|RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223640
NZ_CP047790.1\|WP_001792655.1\|921666_922635_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223682
NZ_CP047790.1\|WP_001220199.1\|922644_923523_-\|heme-ABC-transporter-substrate-binding-protein-IsdE	unknown	unknown	gnl\|CDD\|274706
NZ_CP047790.1\|WP_000390524.1\|906298_908080_-\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP047790.1\|WP_001018928.1\|908403_908718_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP047790.1\|WP_000046704.1\|913555_913822_-\|cell-division-protein-ZapA	unknown	unknown	gnl\|CDD\|172616
NZ_CP047790.1\|WP_000079317.1\|905360_905975_-\|succinate-dehydrogenase-cytochrome-B558	unknown	unknown	gnl\|CDD\|239577
NZ_CP047790.1\|WP_000234068.1\|913033_913555_-\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|224205
NZ_CP047790.1\|WP_000670950.1\|920528_920852_-\|staphylobilin-forming-heme-oxygenase-IsdG	unknown	unknown	gnl\|CDD\|139480
NZ_CP047790.1\|WP_160195007.1\|915564_917967_-\|phenylalanine--tRNA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234804
NZ_CP047790.1\|WP_000161940.1\|911248_912961_-\|DNA-polymerase/3'-5'-exonuclease-PolX	unknown	unknown	gnl\|CDD\|236311
NZ_CP047790.1\|WP_000139712.1\|902727_903543_-\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|181515
NZ_CP047790.1\|WP_000003566.1\|917966_919025_-\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP047790.1\|WP_001788617.1\|920384_920492_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001242420.1\|920870_921605_-\|class-B-sortase	unknown	unknown	gnl\|CDD\|226898
NZ_CP047790.1\|WP_000789821.1\|924595_925279_-\|heme-uptake-protein-IsdC	unknown	unknown	gnl\|CDD\|274705
NZ_CP047790.1\|WP_001246696.1\|923519_924596_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_001249293.1\|908890_911239_-\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP047790.1\|WP_000818276.1\|903542_905309_-\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236319	PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP047790.1\|WP_000435372.1\|919404_920145_-\|RNA-methyltransferase	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	2.00285e-77
NZ_CP047790.1\|WP_001792655.1\|921666_922635_-\|iron-ABC-transporter-permease	gnl\|CDD\|223682	COG0609, FepD, ABC-type Fe3+-siderophore transport system, permease component [Inorganic ion transport and metabolism].	1.25627e-60
NZ_CP047790.1\|WP_001220199.1\|922644_923523_-\|heme-ABC-transporter-substrate-binding-protein-IsdE	gnl\|CDD\|274706	TIGR03659, heme_ABC_transporter_heme-binding_protein_isdE, heme ABC transporter, heme-binding protein isdE. This family of ABC substrate-binding proteins is observed primarily in close proximity with proteins localized to the cell wall and bearing the NEAT (NEAr Transporter, pfam05031) heme-binding domain. IsdE has been shown to bind heme and is involved in the process of scavenging heme for the purpose of obtaining iron.	9.77537e-156
NZ_CP047790.1\|WP_000390524.1\|906298_908080_-\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP047790.1\|WP_001018928.1\|908403_908718_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	3.26685e-48
NZ_CP047790.1\|WP_000046704.1\|913555_913822_-\|cell-division-protein-ZapA	gnl\|CDD\|172616	PRK14126, PRK14126, cell division protein ZapA; Provisional.	1.04877e-21
NZ_CP047790.1\|WP_000079317.1\|905360_905975_-\|succinate-dehydrogenase-cytochrome-B558	gnl\|CDD\|239577	cd03497, SQR_TypeB_1_TM, Succinate:quinone oxidoreductase (SQR) Type B subfamily 1, transmembrane subunit; composed of proteins similar to Bacillus subtilis SQR. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Bacillus subtilis SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside on the transmembrane subunit. The transmembrane subunit of Bacillus subtilis SQR is also called Sdh cytochrome b558 subunit. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	2.37018e-87
NZ_CP047790.1\|WP_000234068.1\|913033_913555_-\|CvpA-family-protein	gnl\|CDD\|224205	COG1286, CvpA, Uncharacterized membrane protein, required for colicin V production [General function prediction only].	4.13485e-29
NZ_CP047790.1\|WP_000670950.1\|920528_920852_-\|staphylobilin-forming-heme-oxygenase-IsdG	gnl\|CDD\|139480	PRK13312, PRK13312, staphylobilin-forming heme oxygenase IsdG.	3.35893e-67
NZ_CP047790.1\|WP_160195007.1\|915564_917967_-\|phenylalanine--tRNA-ligase-subunit-beta	gnl\|CDD\|234804	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed.	0
NZ_CP047790.1\|WP_000161940.1\|911248_912961_-\|DNA-polymerase/3'-5'-exonuclease-PolX	gnl\|CDD\|236311	PRK08609, PRK08609, DNA polymerase/3'-5' exonuclease PolX.	0
NZ_CP047790.1\|WP_000139712.1\|902727_903543_-\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|181515	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	0
NZ_CP047790.1\|WP_000003566.1\|917966_919025_-\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP047790.1\|WP_001242420.1\|920870_921605_-\|class-B-sortase	gnl\|CDD\|226898	COG4509, COG4509, Uncharacterized protein conserved in bacteria [Function unknown].	2.78558e-128
NZ_CP047790.1\|WP_000789821.1\|924595_925279_-\|heme-uptake-protein-IsdC	gnl\|CDD\|274705	TIGR03656, IsdC, heme uptake protein IsdC. Isd proteins are iron-regulated surface proteins found in Bacillus, Staphylococcus and Listeria species and are responsible for heme scavenging from hemoproteins. The IsdC protein consists of an N-terminal hydrophobic signal sequence, a central NEAT (NEAr Transporter, pfam05031) domain, which confers the ability to bind heme, and a C-terminal SrtB processing signal which targets the protein to the cell wall. IsdC is believed to make a direct contact with, and transfer heme to, the heme-binding component (IsdE) of an ABC transporter in the cytoplasmic membrane, and to receive heme from other NEAT-containing heme-binding proteins also localized in the cell wall.	2.0626e-97

>NZ_CP047790.1|WP_000046704.1|913555_913822_-|cell-division-protein-ZapA
MAQFKNKVNVSINDQLFTIVGEDNPEHIRYVAHLVDDKIKELGYKAAGLDTSRKAILTAVNIMHEKVLLEEENRRLKQQIHKLQQREQ
>NZ_CP047790.1|WP_000234068.1|913033_913555_-|CvpA-family-protein
MVIDFIIIIFFVYFVIVGFRRGFWLSMIHLSATIVSLWIASQFYKSIVERLIVFIPYPKTTAFNTTFAFHFNHLQNRFEAIVAFLMITLFCKFILYLIIVTFDKIIAYQNIHIFSRAMGMIVGVFMTIIVLHFTLYLLALYPNEALQHQLKISIVSHSLIFHIPYLSAFTINL
>NZ_CP047790.1|WP_000161940.1|911248_912961_-|DNA-polymerase/3'-5'-exonuclease-PolX
MTKKDVIKLLEQIATYMELKGENTFKISAYRKAAQSLELDERPLDEISDVTELKGIGKGVAEVINDYRETGESQYLQQLQEEVPEGLIPLLKIQGLGSKKIAKLYKELNIVDKASLQVACENGKVSELSGFAKKTEQNILEAVKQLGAKKDRYPIDQMRRLNQEIIDYIDTLNYIDQYSSAGSFRRFKEMSKDLDFIISTDNPKAVQQQLLNIPNKVKEVAVGNTKVSLELAYDDETIGVDFRLIEPSAFYHTLQHFTGSKEHNIRIRQLAKARDEKVSEYGIEQADGTLIQYDSEAKIYEHFNVNFIPPAMREDGSEFDKDLSNIITIDDINGDIHMHTTYSDGAFSIRDMVEANIAKGYKFMVITDHSQSLRVANGLQVERLLRQNEEIKALDKEYSEIDIYSGTEMDILPDGSLDYDDEILAQLDYVIGAIHQSFNQSEEQIMERLANACRNPYVRHIAHPTGRIIGRRDGYKPNIEQLMALAEETNTVLEINANPHRLDLNADIVRKYPNVKLTINTDAHHTNHLDFMNYGVATAQKGFVTKDRVINALSREAFKDFIENNIKLKK
>NZ_CP047790.1|WP_001249293.1|908890_911239_-|endonuclease-MutS2
MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEETDEIAQIYNKHRLPSLSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEGVKYPILDDKMNQLPVLTDLFQQINETCDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQANQKKLSDAIVTVRNERNVIPVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQISRLRHDEAIEKERILTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSIKGTKPIFKEERTVYLPKAYHPLLNRETVVANTIEFMEDIETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHDDLSKQYQQFQNYEKSLIEEAKEKANQKIKAATKEADDIIKDLRQLREQKGADVKEHELIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQKGEVLEIVNDEEAIVQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQNRQTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK
>NZ_CP047790.1|WP_001018928.1|908403_908718_-|thioredoxin
MAIVKVTDADFDSKVESGVQLVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
>NZ_CP047790.1|WP_001788625.1|908245_908341_+|hypothetical-protein
MLDYHLTFIDLLIPPFSSRKQYDDLSFNFLY
>NZ_CP047790.1|WP_000390524.1|906298_908080_-|excinuclease-ABC-subunit-UvrC
MEDYKQRIKNKLNVVPMEPGCYLMKDRNDQVIYVGKAKKLRNRLRSYFTGAHDAKTTRLVGEIRRFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDKSYPFIKITKEKYPRLLVTRTVKQGTGKYFGPYPNAYSAQETKKLLDRIYPYRKCDKMPDKLCLYYHIGQCLGPCVYDVDLSKYAQMTKEITDFLNGEDKTILKSLEERMLTASESLDFERAKEYRDLIQHIQNLTNKQKIMSSDKTIRDVFGYCVDKGWMCIQVFFIRQGNMIKRDTTMIPLQQTEEEEFYTFIGQFYSLNQHILPKEVHVPRNLDKEMIQSVVDTKIVQPARGPKKDMVDLAAHNAKVSLNNKFELISRDESRTIKAIEELGTQMGIQTPIRIEAFDNSNIQGVDPVSAMVTFVDGKPDKKNYRKYKIKTVKGPDDYKSMREVVRRRYSRVLNEGLPLPDLIIVDGGKGHMNGVIDVLQNELGLDIPVAGLQKNDKHQTSELLYGASAEIVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLKSILDDIDGIGNKRKTLLLRSFGSIKKMKEATLEDFKNIGIPENVAKNLHEQLHK
>NZ_CP047790.1|WP_000079317.1|905360_905975_-|succinate-dehydrogenase-cytochrome-B558
MAQSKNEFYLRRIHSLLGIIPIGAFLVVHLLVNHQATQGAEAFNKASNFMESLPFLIIVEFLFIYIPLLYHGLFGIHIAFTAKENVGHYSIFRNWMFFFQRVSGILTFIFIGIHLWQTRLQKAFYGKEVNYDLMHETLQHPGWAIFYIICIIAVVFHFANGLWSFLVTWGGLQSPKSQRVFTWVSLIVFLVISYIGVTAIIAFM
>NZ_CP047790.1|WP_000818276.1|903542_905309_-|succinate-dehydrogenase-flavoprotein-subunit
MAEKHLIVVGGGLAGLMSTIKAAEKGAHVDLFSVVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMTEAAPKIIHLLDRMGVMFNRTNEGLLDFRRFGGTLHHRTAYAGATTGQQLLYALDEQVRAFEVDGLVTKYEGWEFLGIVKGDDDSARGIVAQNMTTAEIETFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAIYANGEFIQIHPTAIPGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCINQKLGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYVDYDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAIDYISNIDRSYTDMDESIFEKRKAEEQERFDKLLAMRGTENAYKLHRELGEIMTANVTVVRENEKLLETDKKIVELMKRYEDIDMEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPERNDEEWLKTTMASFQGAFEKPQFTYDDVDVSLIPPRKRDYTSKSKGGKK
>NZ_CP047790.1|WP_000139712.1|902727_903543_-|succinate-dehydrogenase-iron-sulfur-subunit
MTEQSVKNTPQHETQSKPKQKTVKLIIKRQDTSDSKPYEETFEIPYRENLNVIACLMEIRRNPVNIKGEKTTPVVWDMNCLEEVCGACSMVINGRARQSCSAIVDQLEQPIRLEPMNTFPVIRDLQVDRSRMFDNLKRMKAWIPIDGTYDLGPGPRMPEKKRQTAYELSKCMTCGVCLEVCPNVTENNKFVGAQAISQVRLFNLHPTGSMTKDERLNALMGTGGLQQCGNSQNCVNACPKGIPLTTSIAAMNRETTFHMFKSFFGSDHEVE
>NZ_CP047790.1|WP_160195007.1|915564_917967_-|phenylalanine--tRNA-ligase-subunit-beta
MLISNEWLKEYVTIDDSVSNLAERITCTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDADKLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLPGGIKIKRAKLRGERSEGMICSLQEIGISSNYIPKSFESGIYVFSEAQVPGTDALQALYLDDQVMEFDLTPNRADALSMIGTAYEVAALYNTKMTKPDTTSNELELSANNELTVTIENEDKVPYYSARVVHDVTIEPSPIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLDGTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYDDIPSTLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVEYLSGILTGDYVVNQWQGKKETVDFYLAKGIVDRVSEKLNLEFSYRRADIDGLHPGRTAEILLENKVVGFIGELHPTLAADNDLKRTYVFELNFDALMAVSVGYINYQPIPRFPGMSRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKSIAIRLNYLDTEETLTDERVSKVQAEIEAALIEHGAVIR
>NZ_CP047790.1|WP_000003566.1|917966_919025_-|phenylalanine--tRNA-ligase-subunit-alpha
MSEQQTMSELKQQALVDINEANDERALQEVKVKYLGKKGSVSGLMKLMKDLPNEEKPAFGQKVNELRQTIQNELDERQQMLVKEKLNKQLAEETIDVSLPGRHIEIGSKHPLTRTIEEIEDLFLGLGYEIVNGYEVEQDHYNFEMLNLPKSHPARDMQDSFYITDEILLRTHTSPVQARTMESRHGQGPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNVKMSDLKGTLELLAKKLFGADREIRLRPSYFPFTEPSVEVDVSCFKCKGKGCNVCKHTGWIEILGAGMVHPNVLEMAGFDSSEYSGFAFGMGPDRIAMLKYGIEDIRHFYTNDVRFLDQFKAVEDRGDM
>NZ_CP047790.1|WP_000435372.1|919404_920145_-|RNA-methyltransferase
MEQITSAQNNRIKQANKLKKKRERDKTGLALIEGVHLIEEAYQSGIVITQLFAIEPARLDQQIIAYAQEVFEINMKVAESLSGTVTPQGFFAIIEKPHYDISKAQQVLLIDRVQDPGNLGTLIRTADAAGMDAVIMEKGTTDPYQDKVLRASQGSVFHLPVMIQDLDTFITQFNGPVYGTALENAVAYKEVTSSDSFALLLGNEGEGVNPELLAHTTQNLIIPIYGKAESLNVAIAGSILLYHLKG
>NZ_CP047790.1|WP_001788617.1|920384_920492_-|hypothetical-protein
MVLLAFVTTIHDTDDGRFFNEHKHANNKLLKHSLI
>NZ_CP047790.1|WP_000670950.1|920528_920852_-|staphylobilin-forming-heme-oxygenase-IsdG
MKFMAENRLTLTKGTAKDIIERFYTRHGIETLEGFDGMFVTQTLEQEDFDEVKILTVWKSKQAFTDWLKSDVFKAAHKHVRSKNEDESSPIINNKVITYDIGYSYMK
>NZ_CP047790.1|WP_001242420.1|920870_921605_-|class-B-sortase
MRMKRFLTIVQILLVVIIIIFGYKIVQTYIEDKQERANYEKLQQKFQMLMSKHQAHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDRIMTLSTCEDAYSETTKRIVVVAKIIKVS
>NZ_CP047790.1|WP_001792655.1|921666_922635_-|iron-ABC-transporter-permease
MMIKNKKKLLFLCLLVILIATAYISFVTGTIKLSFNDLFTKFTTGSNEAVDSIIDLRLPRILIALMVGAMLAVSGALLQAALQNPLAEANIIGVSSGALIMRALCMLFIPQLYFYLPLLSFIGGLIPFLIIILLHSKFRFNAVSMILVGVALFVLLNGVLEILTQNPLMKIPQGLTMKIWSDVYILAVSALLGLILTLLLSPKLNLLNLDDIQARSIGFNIDRYRWLTGLLAVFLASATVAIVGQLAFLGIIVPHVVRKLVGGNYRVLIPFSTVIGAWLLLVADLLGRVIQPPLEIPANAILMIVGGPMLICLICQSQRNRI
>NZ_CP047790.1|WP_001220199.1|922644_923523_-|heme-ABC-transporter-substrate-binding-protein-IsdE
MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
>NZ_CP047790.1|WP_001246696.1|923519_924596_-|hypothetical-protein
MRNVKQIATKSIIAIISLGILTYTTMIGSVLADEIKYPSAKFNQPEAKDKTELTTSIFDEKIKENKALELLIFNQENKNVTEEQKLVDEKAQLISDMTGKIYLQVKLKGQIDKEQLVFQNDKNEEFPFVIKDEKDDTIVRILIEQHMDKINMHVKTLAEKKNLDNKEMVYSIHFKEKKVQHDDAKEVPSKHQNQENNQDQLKKDIDDKKDSQKSDTKERRTSLFTEKGLNDIPVQKDKVQQDSNKKIENERPKASGTLKVENSPPTIKKVENNHKEQPKHKDEKSKKEKKKVVEKEKALPAFNRDDDSKNSSQLSSDIKELDEPNHKKQYILFAAGIVLATILLISAHLYSRKRGNQV
>NZ_CP047790.1|WP_000789821.1|924595_925279_-|heme-uptake-protein-IsdC
MKNILKVFNTTILALIIIIATFSNSANAADSGTLNYEVYKYNTNDTSIANDYFNKPAKYIKKNGKLYVQITVNHSHWITGMSIEGHKENIISKNTAKDERTSEFEVSKLNGKIDGKIDVYIDEKVNGKPFKYDHHYNITYKFNGPTDVAGANAPGKDDKNSASGSDKGSDGTTTGQSESNSSNKDKVENPQTNAGTPAYIYAIPVASLALLIAITLFVRKKSKGNVE

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Crispr_ID: NZ_CP047790_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_4

1112531-1112609

Orphan

Consensus_repeat	Method
CCAGCCTCTGTGTTGGGGCCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_4

>merge|NZ_CP047790|4|1112531-1112609|CRISPRCasFinder
CCAGCCTCTGTGTTGGGGCCCCGCCAACTTGCACACTATTGTAAGCTGACTTTCCACCAGCCTCTGTGTTGGGGCCCCG

>NZ_CP047790|4|4|1112531-1112609|CRISPRCasFinder
CCAGCCTCTGTGTTGGGGCCCCG	CCAACTTGCACACTATTGTAAGCTGACTTTCCA
CCAGCCTCTGTGTTGGGGCCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000154922.1\|1097546_1101200_-\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_CP047790.1\|WP_000066053.1\|1109732_1111112_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP047790.1\|WP_000573077.1\|1122196_1123693_+\|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl\|CDD\|181085
NZ_CP047790.1\|WP_000167307.1\|1114086_1115277_-\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736
NZ_CP047790.1\|WP_000781162.1\|1118522_1118906_+\|kinase	unknown	unknown	gnl\|CDD\|378054
NZ_CP047790.1\|WP_000670755.1\|1096478_1097381_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP047790.1\|WP_160195015.1\|1108537_1109743_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP047790.1\|WP_000035058.1\|1117865_1118459_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|238908
NZ_CP047790.1\|WP_160195016.1\|1115584_1116712_-\|NADH-dependent-flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240086
NZ_CP047790.1\|WP_000007967.1\|1105956_1106532_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP047790.1\|WP_000054608.1\|1119036_1121442_+\|Na+/H+-antiporter-subunit-A	unknown	unknown	gnl\|CDD\|237155
NZ_CP047790.1\|WP_000711893.1\|1104836_1105412_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP047790.1\|WP_000758204.1\|1105427_1105952_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP047790.1\|WP_000172378.1\|1101200_1104677_-\|helicase-exonuclease-AddAB-subunit-AddB	unknown	unknown	gnl\|CDD\|213736
NZ_CP047790.1\|WP_000185319.1\|1111353_1112283_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176543
NZ_CP047790.1\|WP_001067294.1\|1117073_1117451_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224023
NZ_CP047790.1\|WP_000138487.1\|1112733_1113978_-\|NAD-specific-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_CP047790.1\|WP_000148852.1\|1106856_1108188_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP047790.1\|WP_001081626.1\|1121434_1121863_+\|Na(+)/H(+)-antiporter-subunit-B	unknown	unknown	gnl\|CDD\|183602
NZ_CP047790.1\|WP_011443624.1\|1121874_1122204_+\|Na(+)/H(+)-antiporter-subunit-C	unknown	unknown	gnl\|CDD\|181497

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000154922.1\|1097546_1101200_-\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047790.1\|WP_000066053.1\|1109732_1111112_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP047790.1\|WP_000573077.1\|1122196_1123693_+\|Na+/H+-antiporter-subunit-D	gnl\|CDD\|181085	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_CP047790.1\|WP_000167307.1\|1114086_1115277_-\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_CP047790.1\|WP_000781162.1\|1118522_1118906_+\|kinase	gnl\|CDD\|378054	pfam08810, KapB, Kinase associated protein B. This bacterial protein forms an anti-parallel beta sheet with an extending alpha helical region.	8.96507e-53
NZ_CP047790.1\|WP_000670755.1\|1096478_1097381_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.74159e-87
NZ_CP047790.1\|WP_160195015.1\|1108537_1109743_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP047790.1\|WP_000035058.1\|1117865_1118459_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|238908	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.	3.93388e-65
NZ_CP047790.1\|WP_160195016.1\|1115584_1116712_-\|NADH-dependent-flavin-oxidoreductase	gnl\|CDD\|240086	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP047790.1\|WP_000007967.1\|1105956_1106532_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.01759e-40
NZ_CP047790.1\|WP_000054608.1\|1119036_1121442_+\|Na+/H+-antiporter-subunit-A	gnl\|CDD\|237155	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed.	0
NZ_CP047790.1\|WP_000711893.1\|1104836_1105412_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.65162e-54
NZ_CP047790.1\|WP_000758204.1\|1105427_1105952_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	9.64837e-49
NZ_CP047790.1\|WP_000172378.1\|1101200_1104677_-\|helicase-exonuclease-AddAB-subunit-AddB	gnl\|CDD\|213736	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RexAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. Nevertheless, the partner is designated AddB in both systems. This model describes the AddB protein as found Bacillus subtilis and related species. Although the RexB protein of Streptococcus and Lactococcus is considered to be orthologous, functionally equivalent, and merely named differently, all members of this protein family have a P-loop nucleotide binding motif GxxGxGK[ST] at the N-terminus, unlike RexB proteins, and a CxxCxxxxxC motif at the C-terminus, both of which may be relevant to function. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047790.1\|WP_000185319.1\|1111353_1112283_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176543	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	5.11302e-151
NZ_CP047790.1\|WP_001067294.1\|1117073_1117451_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|224023	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis].	3.22125e-44
NZ_CP047790.1\|WP_000138487.1\|1112733_1113978_-\|NAD-specific-glutamate-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP047790.1\|WP_000148852.1\|1106856_1108188_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP047790.1\|WP_001081626.1\|1121434_1121863_+\|Na(+)/H(+)-antiporter-subunit-B	gnl\|CDD\|183602	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B.	9.17513e-61
NZ_CP047790.1\|WP_011443624.1\|1121874_1122204_+\|Na(+)/H(+)-antiporter-subunit-C	gnl\|CDD\|181497	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed.	3.20641e-61

>NZ_CP047790.1|WP_000185319.1|1111353_1112283_+|glycerophosphodiester-phosphodiesterase
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSPDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK
>NZ_CP047790.1|WP_000066053.1|1109732_1111112_+|argininosuccinate-lyase
MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
>NZ_CP047790.1|WP_160195015.1|1108537_1109743_+|argininosuccinate-synthase
MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDIVYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVEIAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKHNIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDAADEIILTFDKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAEVILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVSGDVRIKLFKGNAIVNGRKSPYTLYNEKLATYTKEDAFNQDAAVGFIDIYGLPTQVNAMLHGGYSNEQ
>NZ_CP047790.1|WP_000148852.1|1106856_1108188_-|glucose-6-phosphate-isomerase
MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKLEDNIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL
>NZ_CP047790.1|WP_000007967.1|1105956_1106532_-|TVP38/TMEM64-family-protein
MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINIQAYGPILGILISWLGLISGTFTVYLICKRLVNTERMQRIKQRTAVQRLISFIDRQGLIPLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTHPLRGILMLVVLVVFWIVGKKLEQHFMGSKKE
>NZ_CP047790.1|WP_000758204.1|1105427_1105952_-|signal-peptidase-I
MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPSLNKGDRVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSKWTIQFKS
>NZ_CP047790.1|WP_000711893.1|1104836_1105412_-|signal-peptidase-I
MKKELLEWIISIAIALVIFAIIGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKHNFNPENTKN
>NZ_CP047790.1|WP_000172378.1|1101200_1104677_-|helicase-exonuclease-AddAB-subunit-AddB
MTLHAYLGRAGTGKSTKMLTETKQKMKADPLGDPIILIAPTQSTFQLEQAFVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQEQQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQTRTKNKIEDIALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKGLIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFKQLYRFNNQDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYQDIAILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLRLLKTDVLTASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTEDERNTFEQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELPNQLMTERDELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDETMSMERFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVELSPTSDILQMDEAFVCYVAMTRAKGDVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLEITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLYDEIVADSWLDAYQVIRDSDHLNQGLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNERTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPKVQFNLLNSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLTTTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYMDIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWADIDEDKLEQDLIKKFKLSGLVNADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFIETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQNININDEFGGEQ
>NZ_CP047790.1|WP_000154922.1|1097546_1101200_-|helicase-exonuclease-AddAB-subunit-AddA
MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVERIIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQAQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAFIELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQLVTPYEEEAQQAQLIQLLTDLSKVFITAAYDALNKAYDLFSMMDGVDKHLAVIEDERRLMGRVLEGGFIDIPYLTDHEFGARLPNVTAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQQLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYRQHFQEILVDEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYDEAAQLYYGAPYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRSATYKDIVILERSFGQAHNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPLQDIYLVGLMRSVIYQFKEDELAQIRILSPNDDYFYQSIVNYINDEAADAILVDKLKMFLSDIQSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLSKDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYKAVAEKELVSEEMRLVYVALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQSASIPDDLKFEKDIAQVEDSSRPNVNISIIYFEDVSTETILDNNEYRSVNQLETMQNGNEDVKAQIKHQLDYQYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFSTYERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADAKKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMIDLIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILNKEVKGYLYFFKFGTLQL
>NZ_CP047790.1|WP_000670755.1|1096478_1097381_-|fumarylacetoacetate-hydrolase-family-protein
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVERLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK
>NZ_CP047790.1|WP_000138487.1|1112733_1113978_-|NAD-specific-glutamate-dehydrogenase
MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDCDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRGWA
>NZ_CP047790.1|WP_000167307.1|1114086_1115277_-|ornithine--oxo-acid-transaminase
MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVAALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEVRGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ
>NZ_CP047790.1|WP_160195016.1|1115584_1116712_-|NADH-dependent-flavin-oxidoreductase
MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSDIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPGGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWVNQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQERLPLIHKWINGRIPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK
>NZ_CP047790.1|WP_001067294.1|1117073_1117451_-|S1-RNA-binding-domain-containing-protein
MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKYGFQTLKERLPIWIKQSKRAIRND
>NZ_CP047790.1|WP_000035058.1|1117865_1118459_-|peptidyl-prolyl-cis-trans-isomerase
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
>NZ_CP047790.1|WP_000781162.1|1118522_1118906_+|kinase
MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNPTETEGVFFHERKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKLKAQQTKHAEMSLASLARLKEDYSLQYKENFK
>NZ_CP047790.1|WP_000054608.1|1119036_1121442_+|Na+/H+-antiporter-subunit-A
MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWVWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFISTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTIFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVKNHE
>NZ_CP047790.1|WP_001081626.1|1121434_1121863_+|Na(+)/H(+)-antiporter-subunit-B
MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGLLFASSLVIITIAFDIETMRKIFPLDFKILIGIGLVFCIATPIASWFLGKNFFTHVTFDIPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE
>NZ_CP047790.1|WP_011443624.1|1121874_1122204_+|Na(+)/H(+)-antiporter-subunit-C
MIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLITMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDNVESMKGVPEDD
>NZ_CP047790.1|WP_000573077.1|1122196_1123693_+|Na+/H+-antiporter-subunit-D
MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGVAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK

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Crispr_ID: NZ_CP047790_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_5

1208914-1208991

Unclear

Consensus_repeat	Method
TGGCGGGGCCCCAACATAAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_5

>merge|NZ_CP047790|5|1208914-1208991|CRISPRCasFinder
TGGCGGGGCCCCAACATAAAGAATTTCGAAAAGAAATTCTACAAACAATGCAAGTTGGCGGGGCCCCAACATAAAGAA

>NZ_CP047790|5|5|1208914-1208991|CRISPRCasFinder
TGGCGGGGCCCCAACATAAAGAA	TTTCGAAAAGAAATTCTACAAACAATGCAAGT
TGGCGGGGCCCCAACATAAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000513313.1\|1206896_1207736_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_CP047790.1\|WP_001224795.1\|1206403_1206889_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP047790.1\|WP_000662681.1\|1209279_1212126_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP047790.1\|WP_000538141.1\|1214620_1215271_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_CP047790.1\|WP_000134961.1\|1203954_1204890_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP047790.1\|WP_000229238.1\|1212133_1214119_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP047790.1\|WP_000638419.1\|1214387_1214624_-\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_CP047790.1\|WP_001049165.1\|1198962_1199550_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP047790.1\|WP_000369722.1\|1202160_1203072_-\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|224574
NZ_CP047790.1\|WP_000057543.1\|1204956_1206396_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276808
NZ_CP047790.1\|WP_000753321.1\|1215444_1216284_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP047790.1\|WP_000958224.1\|1207741_1208674_-\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_CP047790.1\|WP_001790092.1\|1217971_1218076_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000506531.1\|1218117_1220649_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP047790.1\|WP_010956549.1\|1216692_1217803_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP047790.1\|WP_072360986.1\|1216431_1216539_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001248939.1\|1201168_1202164_-\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_CP047790.1\|WP_000006551.1\|1200113_1201058_-\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194
NZ_CP047790.1\|WP_000816300.1\|1197817_1198720_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP047790.1\|WP_000617735.1\|1221062_1221635_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000513313.1\|1206896_1207736_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	4.81145e-120
NZ_CP047790.1\|WP_001224795.1\|1206403_1206889_-\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	5.56005e-29
NZ_CP047790.1\|WP_000662681.1\|1209279_1212126_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP047790.1\|WP_000538141.1\|1214620_1215271_-\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_CP047790.1\|WP_000134961.1\|1203954_1204890_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	5.91243e-154
NZ_CP047790.1\|WP_000229238.1\|1212133_1214119_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP047790.1\|WP_000638419.1\|1214387_1214624_-\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	4.73465e-34
NZ_CP047790.1\|WP_001049165.1\|1198962_1199550_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.59321e-148
NZ_CP047790.1\|WP_000369722.1\|1202160_1203072_-\|RNase-adapter-RapZ	gnl\|CDD\|224574	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only].	4.97899e-170
NZ_CP047790.1\|WP_000057543.1\|1204956_1206396_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	4.14043e-06
NZ_CP047790.1\|WP_000753321.1\|1215444_1216284_-\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	1.82721e-42
NZ_CP047790.1\|WP_000958224.1\|1207741_1208674_-\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_CP047790.1\|WP_000506531.1\|1218117_1220649_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP047790.1\|WP_010956549.1\|1216692_1217803_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP047790.1\|WP_001248939.1\|1201168_1202164_-\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	5.06652e-172
NZ_CP047790.1\|WP_000006551.1\|1200113_1201058_-\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	7.40812e-153
NZ_CP047790.1\|WP_000816300.1\|1197817_1198720_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	1.43426e-153
NZ_CP047790.1\|WP_000617735.1\|1221062_1221635_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	1.13584e-37

>NZ_CP047790.1|WP_000958224.1|1207741_1208674_-|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_CP047790.1|WP_000513313.1|1206896_1207736_-|prolipoprotein-diacylglyceryl-transferase
MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYVENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
>NZ_CP047790.1|WP_001224795.1|1206403_1206889_-|acetyltransferase
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLVGANSIILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_CP047790.1|WP_000057543.1|1204956_1206396_-|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMAKQKFKQREYKRAAEYFEKVLELSPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYQNELFVSENDLMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_CP047790.1|WP_000134961.1|1203954_1204890_-|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLKDQA
>NZ_CP047790.1|WP_000369722.1|1202160_1203072_-|RNase-adapter-RapZ
MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
>NZ_CP047790.1|WP_001248939.1|1201168_1202164_-|YvcK-family-protein
MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK
>NZ_CP047790.1|WP_000006551.1|1200113_1201058_-|DNA-binding-protein-WhiA
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>NZ_CP047790.1|WP_001049165.1|1198962_1199550_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
>NZ_CP047790.1|WP_000816300.1|1197817_1198720_+|TIGR01777-family-protein
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
>NZ_CP047790.1|WP_000662681.1|1209279_1212126_-|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_CP047790.1|WP_000229238.1|1212133_1214119_-|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIEEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYRTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQIRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_CP047790.1|WP_000638419.1|1214387_1214624_-|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_CP047790.1|WP_000538141.1|1214620_1215271_-|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_CP047790.1|WP_000753321.1|1215444_1216284_-|CHAP-domain-containing-protein
MKKTLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKAVKTPVRKASQAKKVVKQPVQQASKKVVVKQAPKQAVAKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH
>NZ_CP047790.1|WP_072360986.1|1216431_1216539_-|hypothetical-protein
MYLLKQHMQCAFSNITYGDFQGIELIVENVLNYMV
>NZ_CP047790.1|WP_010956549.1|1216692_1217803_-|peptide-chain-release-factor-2
MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD
>NZ_CP047790.1|WP_001790092.1|1217971_1218076_-|hypothetical-protein
MLWEESFYFTSVKYFKKCEEVVKRCYVLSFKKSV
>NZ_CP047790.1|WP_000506531.1|1218117_1220649_-|preprotein-translocase-subunit-SecA
MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKTKQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKGKDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFGEAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK
>NZ_CP047790.1|WP_000617735.1|1221062_1221635_-|ribosome-associated-translation-inhibitor-RaiA
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLIQTSEQ

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Crispr_ID: NZ_CP047790_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_6

1610315-1610417

Orphan

Consensus_repeat	Method
CAAATTTAATACTCAATTCATATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_6

>merge|NZ_CP047790|6|1610315-1610417|CRISPRCasFinder
CAAATTTAATACTCAATTCATATATAGCTTTGATTTAAAAACTGATTTTTTATAAACCTATAGAACTGTAATTTACTTTCAAATTTAATACTCAATTCATAAA

>NZ_CP047790|6|6|1610315-1610417|CRISPRCasFinder
CAAATTTAATACTCAATTCATATA	TAGCTTTGATTTAAAAACTGATTTTTTATAAACCTATAGAACTGTAATTTACTTT
CAAATTTAATACTCAATTCATAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000394698.1\|1608561_1609224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000763767.1\|1608011_1608419_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP047790.1\|WP_000158377.1\|1619236_1619818_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP047790.1\|WP_000424963.1\|1602582_1604124_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP047790.1\|WP_000868264.1\|1618787_1619171_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000746679.1\|1617905_1618532_+\|NDxxF-motif-lipoprotein	unknown	unknown	gnl\|CDD\|380196
NZ_CP047790.1\|WP_000421410.1\|1606920_1607499_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_CP047790.1\|WP_000211678.1\|1619995_1620205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_064626855.1\|1617554_1617833_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000793020.1\|1605652_1606921_-\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP047790.1\|WP_000843947.1\|1598299_1598722_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000930514.1\|1614575_1616099_+\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
NZ_CP047790.1\|WP_001289311.1\|1612743_1613499_-\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_CP047790.1\|WP_000888757.1\|1599777_1600170_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000052781.1\|1613990_1614560_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_CP047790.1\|WP_000157765.1\|1599524_1599740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000264071.1\|1604148_1605615_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
NZ_CP047790.1\|WP_000956140.1\|1609341_1610298_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_CP047790.1\|WP_001792089.1\|1611092_1611191_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000991021.1\|1611275_1612664_+\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000763767.1\|1608011_1608419_+\|hypothetical-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	2.17298e-12
NZ_CP047790.1\|WP_000421410.1\|1606920_1607499_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	9.01486e-119
NZ_CP047790.1\|WP_000158377.1\|1619236_1619818_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	1.30018e-49
NZ_CP047790.1\|WP_000424963.1\|1602582_1604124_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP047790.1\|WP_000746679.1\|1617905_1618532_+\|NDxxF-motif-lipoprotein	gnl\|CDD\|380196	NF033193, lipo_NDxxF, NDxxF motif lipoprotein. Members of this family are lipoproteins, about 200 amino acids long in precursor form, found in Staphylococcus aureus, Bacillus cereus, and various other Firmicutes. The protein family is named for one of its several highly conserved motifs.	1.15385e-71
NZ_CP047790.1\|WP_000793020.1\|1605652_1606921_-\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	5.28569e-170
NZ_CP047790.1\|WP_000930514.1\|1614575_1616099_+\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
NZ_CP047790.1\|WP_001289311.1\|1612743_1613499_-\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.03864e-88
NZ_CP047790.1\|WP_000264071.1\|1604148_1605615_-\|IMP-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
NZ_CP047790.1\|WP_000052781.1\|1613990_1614560_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	1.50623e-124
NZ_CP047790.1\|WP_000956140.1\|1609341_1610298_+\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.00199609
NZ_CP047790.1\|WP_000991021.1\|1611275_1612664_+\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0

>NZ_CP047790.1|WP_000956140.1|1609341_1610298_+|hypothetical-protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVEDLRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQEAQASQAKVLAESTNKVEKNAVTEDKADSKDSKVAGVTTSTDAKTDTKAENAGDGTATKVDKEDQISATEAIEKASVEQSKNENAAETSNKEATVDADAQHDAEQQVAEAHAEASKQATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL
>NZ_CP047790.1|WP_000394698.1|1608561_1609224_+|hypothetical-protein
MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNKTENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHELNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHPTNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRKPF
>NZ_CP047790.1|WP_000763767.1|1608011_1608419_+|hypothetical-protein
MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHKEVQEHNSAYEEIDITHFAEASKGPKA
>NZ_CP047790.1|WP_000421410.1|1606920_1607499_-|xanthine-phosphoribosyltransferase
MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGHQRLEEAGLTVSSLCKVASLEGNKVTLVGEE
>NZ_CP047790.1|WP_000793020.1|1605652_1606921_-|purine-permease
MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILVLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLIICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEENVK
>NZ_CP047790.1|WP_000264071.1|1604148_1605615_-|IMP-dehydrogenase
MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF
>NZ_CP047790.1|WP_000424963.1|1602582_1604124_-|glutamine-hydrolyzing-GMP-synthase
MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCKGQWTMENFIEIEIEKIRQRVGDRRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNIIRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
>NZ_CP047790.1|WP_000888757.1|1599777_1600170_+|hypothetical-protein
MLEDNGDIRLLYQSIEELASVLGQSQFETKTVSLIFVQMDLRYSVFEKVQTDFMKYLAHKNSDEIKYIDLIKIIENALPEDKELSINVINSIIIGFANNYYPILQSLVPEIQSSYGITINKNFNIDSIDF
>NZ_CP047790.1|WP_000157765.1|1599524_1599740_-|hypothetical-protein
MASLTTVEIIPASPLLRPAFIAPRLTASPTELAGTSDHFSNGFNSFTIPEYPLSKIVAAVGGGLTGGVTFC
>NZ_CP047790.1|WP_000843947.1|1598299_1598722_+|hypothetical-protein
MKSVNILLNLLPTELKNMLENKDMENILTYFMSNEISDEKLVSYLSNLANQINTIEYHEMVASIYHFHFNYIDNAYDLAYYHYWQSLEISQFNNPNLLYEFLEILGEPDFDMISHENIQLVANKILERDPNNKLAIKYIN
>NZ_CP047790.1|WP_001792089.1|1611092_1611191_-|hypothetical-protein
MQLNVNMMKFDRWHKGICKQIVLNLVEKGEKG
>NZ_CP047790.1|WP_000991021.1|1611275_1612664_+|L-cystine-transporter
MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVFGVLLHLVYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKFAKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTAHTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKSAIDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYIIHLVILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFAATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDTFESNDNAALTSH
>NZ_CP047790.1|WP_001289311.1|1612743_1613499_-|NADPH-dependent-oxidoreductase
MSEHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFLQAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYGSTEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFGMAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGNRKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR
>NZ_CP047790.1|WP_000052781.1|1613990_1614560_+|peroxiredoxin
MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDEATGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI
>NZ_CP047790.1|WP_000930514.1|1614575_1616099_+|alkyl-hydroperoxide-reductase-subunit-F
MLNADLKQQLKQLLELMEGNVEFVASLGSDEKSKELKELLTEISDMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKNLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREESENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMSTGEEHLLNLDGIFVQIGLLPNTSWLKDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN
>NZ_CP047790.1|WP_064626855.1|1617554_1617833_+|hypothetical-protein
MKSDQAIKEFTSYLRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLIQPIMQLFIDNAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
>NZ_CP047790.1|WP_000746679.1|1617905_1618532_+|NDxxF-motif-lipoprotein
MKKRLLLSTFLASALILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK
>NZ_CP047790.1|WP_000868264.1|1618787_1619171_+|hypothetical-protein
MKVRITFIILSILSTIVCLFLAAMHPTGPSTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVDKNDSH
>NZ_CP047790.1|WP_000158377.1|1619236_1619818_-|histidine-phosphatase-family-protein
MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTDTGTKSADDLCDYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISANPKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQQDDIVIVAHQVVIRCLMVYFNNVSREEAVDLKVENCKPYIIE
>NZ_CP047790.1|WP_000211678.1|1619995_1620205_+|hypothetical-protein
MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPTSPHVNLLLFNPILPTFLNIIIHIDHFHANKKDDN

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Crispr_ID: NZ_CP047790_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_7

1766090-1766180

Orphan

Consensus_repeat	Method
TTCTACAGACAATGCAAGTTGGGGTGTGGGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047790_7

>merge|NZ_CP047790|7|1766090-1766180|CRISPRCasFinder
TTCTACAGACAATGCAAGTTGGGGTGTGGGCCCCAACAAAGAGAATTTCGAAAAGAAATTCTACAGGCAATGCAAGTTGGGGTGTGGGCCC

>NZ_CP047790|7|7|1766090-1766180|CRISPRCasFinder
TTCTACAGACAATGCAAGTTGGGGTGTGGGCCC	CAACAAAGAGAATTTCGAAAAGAAA
TTCTACAGGCAATGCAAGTTGGGGTGTGGGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000872486.1\|1763506_1764223_-\|D-ribitol-5-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|184017
NZ_CP047790.1\|WP_000608831.1\|1758206_1758881_-\|iron-sulfur-cluster-repair-di-iron-protein-ScdA	unknown	unknown	gnl\|CDD\|183940
NZ_CP047790.1\|WP_000531476.1\|1774771_1775239_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP047790.1\|WP_000598262.1\|1764498_1765668_-\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|367953
NZ_CP047790.1\|WP_001792906.1\|1754909_1755353_-\|antiholin-like-murein-hydrolase-modulator-LrgA	unknown	unknown	gnl\|CDD\|235222
NZ_CP047790.1\|WP_000610188.1\|1768434_1769460_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176199
NZ_CP047790.1\|WP_000607067.1\|1754215_1754917_-\|antiholin-like-protein-LrgB	unknown	unknown	gnl\|CDD\|179810
NZ_CP047790.1\|WP_000120109.1\|1772984_1774244_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP047790.1\|WP_000975365.1\|1759024_1760746_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|376098
NZ_CP047790.1\|WP_001012739.1\|1775223_1777320_-\|transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP047790.1\|WP_000645601.1\|1770696_1771740_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP047790.1\|WP_000167984.1\|1766718_1768413_-\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|367953
NZ_CP047790.1\|WP_000645456.1\|1755465_1756206_-\|DNA-binding-response-regulator	unknown	unknown	gnl\|CDD\|184495
NZ_CP047790.1\|WP_000240920.1\|1760778_1762467_-\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|367953
NZ_CP047790.1\|WP_000638475.1\|1769452_1770169_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|184017
NZ_CP047790.1\|WP_000646203.1\|1771911_1772967_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176219
NZ_CP047790.1\|WP_000610207.1\|1762488_1763514_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176199
NZ_CP047790.1\|WP_000230358.1\|1771763_1771910_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000925394.1\|1756208_1757948_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225814
NZ_CP047790.1\|WP_000815795.1\|1774470_1774749_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000872486.1\|1763506_1764223_-\|D-ribitol-5-phosphate-cytidylyltransferase	gnl\|CDD\|184017	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional.	2.28851e-105
NZ_CP047790.1\|WP_000608831.1\|1758206_1758881_-\|iron-sulfur-cluster-repair-di-iron-protein-ScdA	gnl\|CDD\|183940	PRK13276, PRK13276, iron-sulfur cluster repair di-iron protein ScdA.	7.18502e-154
NZ_CP047790.1\|WP_000531476.1\|1774771_1775239_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	1.27465e-37
NZ_CP047790.1\|WP_000598262.1\|1764498_1765668_-\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	1.25735e-161
NZ_CP047790.1\|WP_001792906.1\|1754909_1755353_-\|antiholin-like-murein-hydrolase-modulator-LrgA	gnl\|CDD\|235222	PRK04125, PRK04125, antiholin-like protein LrgA.	8.44339e-64
NZ_CP047790.1\|WP_000610188.1\|1768434_1769460_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176199	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	8.17637e-179
NZ_CP047790.1\|WP_000607067.1\|1754215_1754917_-\|antiholin-like-protein-LrgB	gnl\|CDD\|179810	PRK04288, PRK04288, antiholin-like protein LrgB; Provisional.	5.86643e-124
NZ_CP047790.1\|WP_000120109.1\|1772984_1774244_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	0
NZ_CP047790.1\|WP_000975365.1\|1759024_1760746_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|376098	pfam18674, TarS_C1, TarS beta-glycosyltransferase C-terminal domain 1. Beta-glycosyltransferase TarS is an enzyme responsible for the glycosylation of wall teichoic acid polymers of the S. aureus cell wall, a process that has been shown to be specifically responsible for methicillin resistance in MRSA. It contains a trimerization domain composed of tandem carbohydrate binding motifs.The two C-terminally localized regions composed of a series of beta-sheets participate in an extensive trimerization interface and they assume an immunoglobulin-like fold. It is suggested that both carbohydrate binding domains may be involved in polyRboP binding, however unlike pullulanase, the CBMs of TarS are involved in the formation of an extensive trimerization interface.	6.64158e-35
NZ_CP047790.1\|WP_001012739.1\|1775223_1777320_-\|transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	9.95484e-84
NZ_CP047790.1\|WP_000645601.1\|1770696_1771740_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	9.45294e-176
NZ_CP047790.1\|WP_000167984.1\|1766718_1768413_-\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	1.00668e-114
NZ_CP047790.1\|WP_000645456.1\|1755465_1756206_-\|DNA-binding-response-regulator	gnl\|CDD\|184495	PRK14084, PRK14084, DNA-binding response regulator.	4.37999e-152
NZ_CP047790.1\|WP_000240920.1\|1760778_1762467_-\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	4.42901e-119
NZ_CP047790.1\|WP_000638475.1\|1769452_1770169_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|184017	PRK13385, PRK13385, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Provisional.	3.70751e-127
NZ_CP047790.1\|WP_000646203.1\|1771911_1772967_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176219	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.06411e-146
NZ_CP047790.1\|WP_000610207.1\|1762488_1763514_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176199	cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	0
NZ_CP047790.1\|WP_000925394.1\|1756208_1757948_-\|sensor-histidine-kinase	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	0
NZ_CP047790.1\|WP_000815795.1\|1774470_1774749_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.43648e-34

>NZ_CP047790.1|WP_000598262.1|1764498_1765668_-|CDP-glycerol-glycerophosphotransferase-family-protein
MIKTTIKKLIEHSIYTTFKLLSKLPNKNLIYFESFHGKQYSDNPKALYEYLTEHSDAQLIWGVKKGYEHIFQQHNVPYVTKFSMKWFLAMPRAKAWMINTRTPDWLYKSPRTTYLQTWHGTPLKKIGLDISNVKMLGTNTQNYQDGFKKESQRWDYLVSPNPYSTSIFQHAFHVSRDKILETGYPRNDKLSHKRNDTEYINGIKTRLNIPLDKKVIMYAPTWRDDEAIREGSYQFNVNFDIEALRQALDDDYVILLRMHYLVVTRIDEHDDFVKDVSDYEDISDLYLISDALVTDYSSVMFDFGVLKRPQIFYAYDLDKYGDELRGFYMDYKKELPGPIVENQTALIDALKQIDETTNEYIEARTVFYQKFCSLEDGHASQRICQTIFK
>NZ_CP047790.1|WP_000872486.1|1763506_1764223_-|D-ribitol-5-phosphate-cytidylyltransferase
MKYAGILAGGIGSRMGNVPLPKQFLDLDNKPILIHTLEKFILINDFEKIIIATPQQWMTHTKDTLRKFKISDERIEVIQGGSDRNDTIMNIVKHIESTNGINDDDVIVTHDAVRPFLTHRIIKENIQAALEYGAVDTVIDAIDTIVTSKDNQTIDAIPVRNEMYQGQTPQSFNINLLKESYAQLSDEQKSILSDACKIIVETNKPVRLVKGELYNIKVTTPYDLKVANAIIRGGIADD
>NZ_CP047790.1|WP_000610207.1|1762488_1763514_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MINQVYQLVAPRQFEVTYNNVDIYSDYVIVRPLYMSICAADQRYYTGSRDENVLSQKLPMSLIHEGVGEVVFDSKGVFNKGTKVVMVPNTPTETDDVIAENYLKSSYFRSSGHDGFMQDFVLLNHDRAVPLPDDIDLSIISYTELVTVSLHAIRRFEKKSISNKNTFGIWGDGNLGYITAILLRKLYPESKIYVFGKTDYKLSHFSFVDDVFFINKIPEGLTFDHAFECVGGRGSQSAINQMIDYISPEGSIALLGVSEFPVEVNTRLVLEKGLTLIGSSRSGSKDFQDVVDLYIQYPDIVDKLALLKGQEFEIATINDLTEAFEADLSTSWGKTVLKWIM
>NZ_CP047790.1|WP_000240920.1|1760778_1762467_-|CDP-glycerol-glycerophosphotransferase-family-protein
MVKSKIYIDKIYWERVQLFVEGHSENLDLEDSNFVLRNLTETRTMKANDVKIDGNQFVCRFNVAILDNGYYLPEDKYLLVNEQELDYIAQLNPDVINDAYQNLKPEQEEEYNELETQNGKINFLLQTYLKEFRKGGISKKTVYTVTPEISSDVNEFVLDVVVTTPEVKSIYIVRKYKELRKYFRKQSFNTRQFIFKAIFNTTKFFHLKKGNTVLFTSDSRPTMSGNFEYIYNEMLRQNLDKKYDIHTVFKANITDRRGIIDKFRLPYLLGKADYIFVDDFHPLIYTVRFRRSQEVIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYVSSETDIPFYAEAFGIKEKNVVPTGVPRTDVLFDEAYATQIKQEMEDELPIIKGKKVILFAPTFRGSGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNIADKHKQYFVDVSDFREVNDILFITDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYESFVPGKIVQSFDALMDALDNEDYEGEKVIPFLDKHFKYQDGRSSERLVRNLFGS
>NZ_CP047790.1|WP_000975365.1|1759024_1760746_-|glycosyltransferase-family-2-protein
MMKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCSTDQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETLKDAAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRTTLLKDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVSPEDFYEVMRLIAVEILNADLEEAHKDQILAEFLNRHFSFSRTNGFSLKVKLEDQPQWINALGDFIQAVPERVDALVMSKLRPLLHYARAKDIDNYRTVEESYRQGQYYRFDIVDGKLNIQFNEGEPYFEGIDIAKPKVKMTAFKFDNHKIVTELTLNEFMIGEGHYDVRLKLHSRNKKHTMYVPLSVNANKQYRFNIMLEDIKAYLPKEKIWDVFLEVQIGTEVFEVRVGNQRNKYAYTAETSALIHLNNDFYRLTPYFTKDFNNISLYFTAITLTDSISLKLKGKNKIILTGLDRGYVFEEGMASVVLKDDMIMGMLSQTSENEVEILLSKDIKKRDFKNIVKLNTAHMTYSLK
>NZ_CP047790.1|WP_000608831.1|1758206_1758881_-|iron-sulfur-cluster-repair-di-iron-protein-ScdA
MINKNDIVADVVTDYPKAADIFRSVGIDFCCGGQVSIEAASLEKKNVDLNELLQRLNDVEQTNTPGSLNPKFLNVSSLIQYIQAAYHEPLREEFKNLTPYVTKLSKVHGPNHPYLVELKETYDTFKNGMLEHMQKEDDVDFPKLIKYEQGEVVDDINTVIDDLVSDHIATGQLLVKMSDLTSSYEPPIEACGTWRLVYQRLKALEVLTHEHVHLENHVLFKKVS
>NZ_CP047790.1|WP_000925394.1|1756208_1757948_-|sensor-histidine-kinase
MLLLERVGLIIILAYVLMNIPYFKNLMNRRRTWKARWQLCIIFSLFALMSNLTGIVIDHQHSLSGSVYFRLDDDVSLANTRVLTIGVAGLVGGPFVGLFVGVISGIFRVYMGGADAQVYLISSIFIGIIAGYFGLQAQRRKRYPSIAKSAMIGIVMEMIQMLSILTFSHDKAYAVDLISLIALPMIIVNSVGTAIFMSIIISTLKQEEQMKAVQTHDVLQLMNQTLPYFKEGLNRESAQQIAMIIKNLMKVSAVAITSKNEILSHVGAGSDHHIPTNEILTSLSKDVLKSGKLKEVHTKEEIGCSHPNCPLRAAIVIPLEMHGSIVGTLKMYFTNPNDLTFVERQLAEGLANIFSSQIELGEAETQSKLLKDAEIKSLQAQVSPHFFFNSINTISALVRINSEKARELLLELSYFFRANLQGSKQHTITLDKELSQVRAYLSLEQARYPGRFNININVEDKYRDVLVPPFLIQILVENAIKHAFTNRKQGNDIDVSVIKETATHVRIIVQDNGQGISKDKMHLLGETSVESESGTGSALENLNLRLKGLFGKSAALQFESTSSGTTFWCVLPYERQEEE
>NZ_CP047790.1|WP_000645456.1|1755465_1756206_-|DNA-binding-response-regulator
MKALIIDDEPLARNELTYLLNEIGGFEEINEAENVKETLEALLINQYDIIFLDVNLMDENGIELGAKIQKMKEPPAIIFATAHDQYAVQAFELNATDYILKPFGQKRIEQAVNKVRATKAKDDNSASAIANDMSANFDQSLPVEIDDKIHMLKQQNIIGIGTHNGITTIHTTNHKYETTEPLNRYEKRLNPAYFIRIHRSYIINTKHIKEVQQWFNYTYMVILTNGVKMQVGRSFMKDFKASIGLL
>NZ_CP047790.1|WP_001792906.1|1754909_1755353_-|antiholin-like-murein-hydrolase-modulator-LrgA
MVVKQQKDASKPAHFFHQVIVIALVLFVSKIIESFMPIPMPASVIGLVLLFVLLCTGAVKLGEVEKVGTTLTNNIGLLFVPAGISVVNSLGVISQAPFLIIGLIIVSTILLLICTGYVTQIIMKVTSRSKGDKVTKKIKIEEAQAHD
>NZ_CP047790.1|WP_000607067.1|1754215_1754917_-|antiholin-like-protein-LrgB
MINHLALNTPYFGILLSVIPFFLATILFEKTNRFFLFAPLFVSMVFGVAFLYLTGIPYKTYKIGGDIIYFFLEPATICFAIPLYKKREVLVKHWHRIIGGIGIGTVVALLIILTFAKLAQFANDVILSMLPQAATTAIALPVSAGIGGIKELTSLAVILNGVIIYALGNKFLKLFRITNPIARGLALGTSGHTLGVAPAKELGPVEESMASIALVLVGVVVVAVVPVFVAIFF
>NZ_CP047790.1|WP_000167984.1|1766718_1768413_-|CDP-glycerol-glycerophosphotransferase-family-protein
MTKTKQAIHIDNIYWERVQLYIEGHSEGVDLTSGQFVLRNLTETKTLEANEMKIDGNTFICRFNVAILDDGYYLPMDKYLFVYHDQLEYIGQLNPNIIDQAYAALNEEQIEEYNELTTQNGKVNYLLAYDAKVFRKGGVSQHTVYTITPEIASDVNEFVFDIEITLPQEKSGVIATSAHWLHKQGHKASFESRSFLFKAIFNITKLLHIKRSKTILFTSDSRPNLSGNFKYVYDELLRQKVDFDYDIKTVFKANITDRRKWRDKFRLPYLLGKADYIFVDDFHPLIYTVRFRPSQEIIQVWHAVGAFKTVGFSRTGKKGGPFIDSLNHRSYTKAYVSSETDIPFYAEAFGIREENVVPTGVPRTDVLFDETYATQIKQEMEDELPIIKGKKVILFAPTFRGNGHGTAHYPFFKIDFERLARYCEKNNAVVLFKMHPFVKNRLNISREHRQYFIDVSDYREVNDILFVTDLLISDYSSLIYEYAVFKKPMIFYAFDLEDYITTRDFYEPYESFVPGKIVQSFDALMDALDNEDYEVEKVVPFLDKHFKYQDGRSSERLVKDLFRR
>NZ_CP047790.1|WP_000610188.1|1768434_1769460_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MINQVYQLVAPRQFDVTYNNVDIYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPMSLVHEAVGEVVFDSKGVFEKGTKVVMVPNTPTEQHHIIAENYLASSYFRSSGYDGFMQDYVVMAHDRIVPLPNDIDLSTISYTELVSVSYHAIQRFERKSIPLKTSFGIWGDGNLGYITAILLRKLYPEAKTYVFGKTDYKLSHFSFVDDIFTVNQIPDDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELPVEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEKDLSTSWGKTVLKWTI
>NZ_CP047790.1|WP_000638475.1|1769452_1770169_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVSEFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDHIRNVNGINNDDVIVTHDAVRPFLTQRIIKENIEVAAKYGAVDTVIEAIDTIVMSKDKQNIHSIPVRNEMYQGQTPQSFNIKLLQDSYRALSSEQKEILSDACKIIVESGHAVKLVRGELYNIKVTTPYDLKVANAIIQGDIADD
>NZ_CP047790.1|WP_000645601.1|1770696_1771740_-|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGVEDLRYEDNEKPVIESANDVIIKVRATGICGSDTSRYKKMGPYIKGMPFGHEFSGVVDAIGSDVTHVNVGDKVTGCPAIACYQCGYCLKGEYARCEKLFVIGSYEPGSFAEYVKLPAQNVLKVPDNVDYIEAAMVEPSAVVAHGFYKSNIQPGMTVAVMGCGSIGLLAIQWARIFGAAHIIAIDIDAHKLDIATSLGAHQTINSKEENLEKFIENHYANQIDLAIESSGAKVTIGQILTLPKKGGEVVLLGIPYDDIEIDRVHFEKILRNELTVCGSWNCLSSNFPGKEWTATLHYMKTKDINVKPIISHFLPLEKGPETFDKLVNKKERFDKVMFTIY
>NZ_CP047790.1|WP_000230358.1|1771763_1771910_-|hypothetical-protein
MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKKKVVN
>NZ_CP047790.1|WP_000646203.1|1771911_1772967_-|zinc-binding-dehydrogenase
MKALVKTREGHGNLELLDKEVATPLDDKVKIKVHYAGICGTDIHTYEGHYKVNFPVTLGHEFSGEIVEVGADVKDFKVGDRVTSETTFYVCNECEYCKSKDYNLCNHRKGIGTQVDGAFTNYVIAREESLHHIPDEVSYQSAAMTEPLACAHHGVSKIQVNSGDVAVVMGPGPIGLLVAQVLKSKGATVVVTGLDNDKVRLDKAEALHMDYVVNLQQTDLKTYINGITDGYGADVVVECSGAVPAARQGLDILRKKGFYSQIGIFKDAEIPFDMEKVIQKEITVVGSRSQKPADWEPSLQLMADGLVNAEALVTKIYDISKWDEAYQHLKSGEGIKALLKPLDLDENEGEN
>NZ_CP047790.1|WP_000120109.1|1772984_1774244_-|PTS-galactitol-transporter-subunit-IIC
MSYFTDFVRGFLDLGATVILPVVIFLLGLFFRQKIGAAFRSGLTIGVAFVGIFLVIDLLVKNLGPAAQAMVKNLGVSLNVIDVGWPATSSIAWASSVAAFIIPLGIIVNVVLLVTKVTKTMNVDIWNFWHYTFTAAMVYAVSGSIWQALLAAVIFQVICLKVADWTAPMMSEFFDLPGVSIATGSTISYAPGIYLVKLLQKVPGLNKLDADPETIQKRFGAFGESIFVGLILGLGIGVLAGYKPGDIINLGMSMAAVMVLMPRMVKILMEGLMPVSESARTWLNKRFGEREIYIGLDAAVALGHPAVISTALILVPITVLLAVILPGNQVLPFGDLATIPFVVAFIVGAARGNIIHSVIVGTIMIAISLYIATDVAPIFTDMAKGTNVQMPKGSSEISSIDQGGNIVNYLIFKLFSLFN
>NZ_CP047790.1|WP_000815795.1|1774470_1774749_-|PTS-sugar-transporter-subunit-IIB
MKQVLVACGAGIATSTVVNNAIEEMAKEHNIKVDIKQIKITEVGPYEDTADLLVTTAMTKKEYKFPVINARNFLTGIGIEETKQQILTELQK
>NZ_CP047790.1|WP_000531476.1|1774771_1775239_-|PTS-sugar-transporter-subunit-IIA
MGQQLVHKENIMLNLSATDKESVLSQMSDVLFQNGFVKSTFKDAVIDREKEFATGLPTHLCSVAIPHTDVEHINHRTIGVAVLEKEVPFIEMGTLDQQTEVKIVFMLAMDKVDDQLKLLQQLMQIFQSEEKLEQILRTKDETILATLINDYLEYN
>NZ_CP047790.1|WP_001012739.1|1775223_1777320_-|transcription-antiterminator
MNGDNQQILREIVLNPTIHGKELESIFGLSRRQLGYRIQKINLWLEQEGYPKLERTSQGNFIVSSEIMTLFKRDVSEQQMLNGNNVIFSIETRRYYLMLMLFSKENAMSLNHFSIDLQVSKNTVIHDINHVKEQLEDHGLSLKYSRKHGYEIVGDEFEVRRFFIKLIDQRLNHDITKSEVLKALNLTFEDIAYQKDKIKQVEQFLKSRFIDKSLSSLPYVLCVIRRRIQSGHVMNPLNINYQYLRDTKEYQATEIMTQHEPDLPEAEKLYLTLHLLSTSVQWTDLQESDSISNLTMAIAQMIHHFEQITFINIEDKEKLSQQLLLHLTPAFYRIKYNLTDRDELINPLQGNYQSLFHMVKQSCQSLTEYFGKSLPDNEIAYLTMLFGGSLRRQDENFDGKIKAIIVCTQGTSVSQMMLYELRNLFPEIIFLDAISLRTFENYTLDYDIVFSPMFVLTHKKLFITKVALSENEQRKLRKEVMKYINKESADIDKEINKLMALIERTTTVNDITELRDGLEDFIANYNSISTINGSIVTQNKTLDLADLIPARHVKRIHHVENIDEAIAKASDVLVANHFIDIKYIHEMQQVFDDSYMVIMQNIAIPHAYSEKHVHKTAMSMLILQEPIYMSDGTAIHIIVPIAAVDKVTHLRALLQLRDVAQDNDAIKRIIQSRKNSDVNEILKNYSNKEARENGWDSN

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Crispr_ID: NZ_CP047790_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_8

2233556-2233689

Orphan

Consensus_repeat	Method
TATTGAAGAAGATACAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP047790_8

>merge|NZ_CP047790|8|2233556-2233689|PILER-CR
TATTGAAGAAGATACAAATAAAGATAAACCAAATTATCAATTTGGTGGACACAACAGTGTTGATTTTGAAGAAGATACACTTCCAAAAGTAAGCGGTCAAAATGAAGGTCAACAAACGATTGAAGAAGATACAA

>NZ_CP047790|8|2|2233556-2233689|PILER-CR
TATTGAAGAAGATACAA	ATAAAGATAAACCAAATTATCAATTTGGTGGACACAACAGTGTTGA
TTTTGAAGAAGATACAC	TTCCAAAAGTAAGCGGTCAAAATGAAGGTCAACAAAC
GATTGAAGAAGATACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000481425.1\|2229249_2230608_+\|gluconate-permease	unknown	unknown	gnl\|CDD\|129873
NZ_CP047790.1\|WP_000876662.1\|2227579_2229133_+\|gluconokinase	unknown	unknown	gnl\|CDD\|130381
NZ_CP047790.1\|WP_110179771.1\|2240573_2244689_+\|YSIRK-type-signal-peptide-containing-protein	unknown	unknown	gnl\|CDD\|375909
NZ_CP047790.1\|WP_000841432.1\|2234797_2237587_+\|fibronectin-binding-protein-FnbB	unknown	unknown	gnl\|CDD\|371043
NZ_CP047790.1\|WP_000678764.1\|2247038_2247305_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001790696.1\|2230990_2231092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_160195051.1\|2245072_2246266_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP047790.1\|WP_000721337.1\|2237766_2238633_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP047790.1\|WP_001117047.1\|2224453_2224870_+\|DUF2188-domain-containing-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP047790.1\|WP_000386367.1\|2238843_2239587_-\|HTH-type-transcriptional-regulator-SarU	unknown	unknown	gnl\|CDD\|130944
NZ_CP047790.1\|WP_000289134.1\|2225100_2225793_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP047790.1\|WP_000679366.1\|2230741_2230942_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_010956661.1\|2246246_2246480_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000586384.1\|2222491_2224315_+\|FUSC-family-protein	unknown	unknown	gnl\|CDD\|224208
NZ_CP047790.1\|WP_000998872.1\|2239912_2240269_+\|HTH-type-transcriptional-regulator-SarT	unknown	unknown	gnl\|CDD\|130944
NZ_CP047790.1\|WP_000217723.1\|2246586_2246895_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000660709.1\|2220304_2221582_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP047790.1\|WP_001792493.1\|2247588_2249397_-\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP047790.1\|WP_000990133.1\|2226875_2227556_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP047790.1\|WP_000074005.1\|2225957_2226722_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000481425.1\|2229249_2230608_+\|gluconate-permease	gnl\|CDD\|129873	TIGR00791, Gluconate_permease, gluconate transporter. This family includes known gluconate transporters of E. coli and Bacillus species as well as an idonate transporter from E. coli. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.53789e-168
NZ_CP047790.1\|WP_000876662.1\|2227579_2229133_+\|gluconokinase	gnl\|CDD\|130381	TIGR01314, gntK_FGGY, gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway. [Energy metabolism, Sugars].	0
NZ_CP047790.1\|WP_110179771.1\|2240573_2244689_+\|YSIRK-type-signal-peptide-containing-protein	gnl\|CDD\|375909	pfam18483, Bact_lectin, Bacterial lectin. This entry primarily matches to legume-like lectin domains found in prokaryotes.	1.63043e-17
NZ_CP047790.1\|WP_000841432.1\|2234797_2237587_+\|fibronectin-binding-protein-FnbB	gnl\|CDD\|371043	pfam10425, SdrG_C_C, C-terminus of bacterial fibrinogen-binding adhesin. This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). SdrG binds to its ligand with a dynamic "dock, lock, and latch" mechanism which represents a general mode of ligand-binding for structurally related cell wall-anchored proteins in most Gram-positive bacteria. The C-terminal part of SdrG(276-596) is integral to the folding of the immunoglobulin-like whole to create the docking grooves necessary for Fg binding. The domain is associated with families of Cna_B, pfam05738.	9.9461e-35
NZ_CP047790.1\|WP_001117047.1\|2224453_2224870_+\|DUF2188-domain-containing-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	9.39579e-63
NZ_CP047790.1\|WP_000386367.1\|2238843_2239587_-\|HTH-type-transcriptional-regulator-SarU	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	9.70785e-26
NZ_CP047790.1\|WP_000289134.1\|2225100_2225793_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	5.59791e-85
NZ_CP047790.1\|WP_160195051.1\|2245072_2246266_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.32017e-57
NZ_CP047790.1\|WP_000586384.1\|2222491_2224315_+\|FUSC-family-protein	gnl\|CDD\|224208	COG1289, COG1289, Predicted membrane protein [Function unknown].	3.71047e-89
NZ_CP047790.1\|WP_000998872.1\|2239912_2240269_+\|HTH-type-transcriptional-regulator-SarT	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	4.06037e-28
NZ_CP047790.1\|WP_000990133.1\|2226875_2227556_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.91306e-44
NZ_CP047790.1\|WP_000660709.1\|2220304_2221582_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.24287e-91
NZ_CP047790.1\|WP_001792493.1\|2247588_2249397_-\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP047790.1\|WP_000721337.1\|2237766_2238633_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	5.5142e-177
NZ_CP047790.1\|WP_000074005.1\|2225957_2226722_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	2.57514e-33

>NZ_CP047790.1|WP_001790696.1|2230990_2231092_+|hypothetical-protein
MLLKTEQYRLAFIKFKKLMNFAFKGRYYSEKQS
>NZ_CP047790.1|WP_000679366.1|2230741_2230942_+|hypothetical-protein
MKGVLRHVFVRIVQAIIMKRLVYCFKLDNDEFNLKNKYKKYKSCVTRVSDDLNTIYRYISNNKIIN
>NZ_CP047790.1|WP_000481425.1|2229249_2230608_+|gluconate-permease
MFNEIWPLISVVLGIVILLVLIIGFKLNTFISLIITSMITALMLGIPLTKIMETIEKGMGSTLGHIALIFGLGAILGKLLADGGGATRIADTLIQKFGQKHVQWAMLVAAFIVGIALFFEVGLVLLIPLVFTVAKRANVSVLKLGLPMVTALSVTHGFLPPHPGPVVIAKELKANVGDVLLYGMIIAIPVTLIAGPIFNKVAQKMIPSAYTREGDISALGAQKEFTDQEMPGFGMSLLTATLPVILMLVSTITQLVTGHDKPTNLFESIIYMIGTAGTAMLIAVLFAIVTMGLMRKRKMNHIMESVTNAIYPIGMMLLIIGGGGTFKQVLIDGGVGNTIAKMFEGTEMSPILLAWIVAAVLRIALGSATVAAISTTGIVLPLLQSSDVNVALVVLAIGAGSVILSHVNDAGFWMFKEYFGLTVKETFLTWSLLETIISVSGIIFILFISLFV
>NZ_CP047790.1|WP_000876662.1|2227579_2229133_+|gluconokinase
MKYMIGVDIGTTSTKSVLYDENGTFIMKHQIGYDLHTPNVDVSEENPDELFDAVLMTIKYVMRESKVNKDDIKFVSFSAQMHSLIAMDQKHQRLTNNITWADNRAAKYATVINEVHDGNAIYQRTGTPIHPMSPLVKIFWMKHEWQDVFQRTAKFADIKTYIFYHLFDTYIIDYSMASATGMFNLETLDWDVGALELLGISKEMLPELVPTTYVMKGMKERYATLMGLNEDTPFVIGASDGVLSNLGVNSVGKGEVAVTIGTSGAIRTVIDKPRTDYKGRIFCYVLTEDHYVIGGPVNNGGVVLRWLRDELLASEVETAKRLGVDPYDVLTQIAKRVKPGADGLIFHPYLAGERAPLWNANARGSFFGLTLSHKKEHMIRAALEGVLYNLYTVYLALIEVMNETPKMIKATGGFAKSEVWRQMMSDIFDTELVVPESYESSCLGACVLGLKAVGDIEDFSIVSSMVGATNNHTPFEENVAVYQELVSIFINLSRSLTENYEQIADFQRQHMAENKTQ
>NZ_CP047790.1|WP_000990133.1|2226875_2227556_+|GntR-family-transcriptional-regulator
MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKLLQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEMMKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNPQDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
>NZ_CP047790.1|WP_000074005.1|2225957_2226722_+|MerR-family-transcriptional-regulator
MSNYSTGELAKLCNVTTRTIQYYDRKGILKPQGFTEGKRRVYTEQQRQTLELILLLKDLGCALSDIDMLLKGEGTLKTLNTLLTMKQQEINQQVKQQQAVLNKIKNVQYYVNEASTSPITHLKDIEHVMSKSAEMKSIRRNIWISAGIIGIIQYSSIISAILMKNKWPFLIALPFMICYGIGVTFYYQQKVAYLCPNCQHIFSPSLWAVIKAKHTATTRRFECPNCHETHYCIEVPKAHMSTEQLEISRIQHNN
>NZ_CP047790.1|WP_000289134.1|2225100_2225793_+|GTP-pyrophosphokinase-family-protein
MYVDRKPSLYLEDLRHDFKNSLSKFENGDEAFDTLLGFVELDHIYSSALKEISTKLSILDDNFNHIYKHNPIHHMERRVKEMRSLIEKLNRKGLQISAETAKEHILDIAGIRVVCNYLDDIYLIEEMLLKQEDVQLIKRKDYIQHPKENGYRSLHIVVSIPVFLAERVEVLPVEIQIRTIGMDMWASLEHKIRYKNKAETEKYRDLLKECATEITEVENKLQQIHSEITE
>NZ_CP047790.1|WP_001117047.1|2224453_2224870_+|DUF2188-domain-containing-protein
MPFTMKGYPEKWKDFEVIKRQKAIEIANAMLKEGYLEKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQEQSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
>NZ_CP047790.1|WP_000586384.1|2222491_2224315_+|FUSC-family-protein
MIIPAIIGYLCGNFQFGLLVATGTLAHIYVFKGPSRSKLRTVIICNLAFAICMMLGTLTAKTPLVFGMTLLIVTVIPFYIFTALKIAGPSSTFFIVTFSLPINLPIAPEEALYRGFAILVGGILATMMVLITIVFSKNKAEEQAIQNDFKLISKLLHTYNDKSAFLQVAKTAVDNFKASDKLLITSTSSNDKLSRRFQKLLLLHTSAQGIYSELLELNAKQIRPLPDELIEMMDHIIAQLDNSEENVRYWRKEVTVTEEFQNLFNHILKIDEMVHANEARIAYEADMRKPLYSKRIYQNLTLDSIVFRNTLRYTAIMMIAIFIALMFDFEKAYWIPLSAHTILLGTSTIHAIERGMARGLGTILGVLVLSVILLFSIPTPVAVILMGIAALFTEALVGANYAIAVVFITIQVILMNGLASQNLTINIAFPRVIDVAMGIVIAIIGLFVLGQRTASALLPNVMAEVVRKEATLFHYLFSENQYKDDVYQKNTAMNLSVKLNNMTQVYNAANGELFSDKTLIQNYYPSLFALEEISFMLNRAMANEDRLTINEQLMGEYLATFENIAKHLELNTELEIKILPDLPQYNYIQSAMMNIQHNGFRERDKNV
>NZ_CP047790.1|WP_000660709.1|2220304_2221582_+|MFS-transporter
MKEKRTNVRWMFALAFFFIGVIAYMDRANISYIAKQMMDDLGMTKPQFGLLASFFSLGYALMQVPSGMLAEKFGPRKMITIALVWWSAFTILTGMIKNHGLIYLVRFLFGVGEAPMYPSNAVFNSFWFSKNEKGRASSALLAGSYFGPVLAPIVTIAIVNAFNWQAVFYIFGAVGILMAVLWAIIAKDLPEQHRMVNEAEKRFIMENRDIVATEKSSPPWNDFFKRFSFYAIAIQYFVVQFIITLFLIWLPTYLTEVFHVNFKEMSISSLPWLLMFFLILSAGAISDRVLGLGRSKFVARGVIAIAGFIVFAVSIIFAVRTGNLYVSIFWLSLGLGGIGISMGMSWAAATDLGRNFSGTVSGWMNLWGNIGALISPLLAGLFVEHLGWTMTFQLLIVPAVIAVIMWFYVKPDQPLIVSDDKAIEK
>NZ_CP047790.1|WP_000841432.1|2234797_2237587_+|fibronectin-binding-protein-FnbB
MKSNLRYGIRKHKLGAASVFLGTMIVVGMGQEKEAAASEQNNTTVEESGSSATESKASETQTTTNNVNTIDETQSYSATSTEQPSQSTQVTTEEAPTTVQAPKVETSRVDLASEKVADKKTTGTQVDTAQPSNVSEIKPRMKRSTDVAEVAEKEVVEEAKATGTDVTSKVTVENGSEIVGHKQDTNVVNPHNAERVTLKYKWKFGEGIKAGDYFDFTLSDNVETHGISTLRKVPEIKSSTEDKVMANGQVIGERKIRYTFTDYIDNKKDLTAELTLNLFIDPTTVTKQGMEKVEVSLGQNKVSKEFDIKYLDGVKDRMGVTVNGRIDTLNKADGKFSHFAYVKPNNQSLSSVTVTGQVTSGYKQNVKNPTVKVYKHIGSDELAESIYAKLDDVSKFEDVTGELTLQYTSNGGYSLNFNNLDQSKNYVIKYEGDYDSNASTLEFQTHLFGYYNYYYYNTSNLTWKNGVAFYSNNAQGDGKDKPNDPIIEKSEPIDLDIKSEPPVEKHELTGTIEESNDSKPIDFEYHTAVEGAEGHAEGIIETEEDSIHVDFEESTHENSKHHADVVEYEEDTNPGGGQVTTESNLVEFDEDSTKGIVTGAVSDHTTVEDTKEYTTESNLIELVDELPEEHGQAQGPIEEITENYQHISHSGLGTENGHGNYGVIEEIEENSHVDIKSELGYEGGQNSGNQSFEEDTEEDKPKYEQGGNIVDIDFDSVPQIQGQNNGDQSFEEDTEEDKPKYEQGGNIIDIDFDSVPHIHGFNKHTEIIEEDTNKDKPNYQFGGHSSVDFEEDTLPQVSGHNEGQQTIEEDTTPPIVPPTPPTPEVPSEPEVPTPPTSEIPSEPGKPVPPAKEEPKKPSKPVEQGKVVTPVIEINEKVKAVAPTKKAQSKKSELPETGGEESTNKGMLFGGLFSILGLALLRRNKKNHKA
>NZ_CP047790.1|WP_000721337.1|2237766_2238633_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKIKKAIIPAAGLGTRFLPATKAMPKEMLPILDKPTIQYIVEEAARAGIEDIIIVTGRHKRAIEDHFDSQKELEMVLKEKGKSELLEKVQYSTELANIFYVRQKEQKGLGHAISSARQFIGNEPFAVLLGDDIVESEVPAVKQLIDVYEETGHSVIGVQEVPEADTHRYGIIDPLTKNGRQYEVKKFVEKPAQGTAPSNLAIMGRYVLTPEIFDYLKTQKEGAGNEIQLTDAIERMNNDNQVYAYDFEGERYDVGEKLGFVKTTIEYALKDDSMREELTRFIKELGL
>NZ_CP047790.1|WP_000386367.1|2238843_2239587_-|HTH-type-transcriptional-regulator-SarU
MDYQTFEKVNKFINVEAYIFFLTQELKQQYKLSLKELLILAYFYYKNEHSISLKEIIGDILYKQSDVVKNIKSLSKKGFINKSRNEADERRIFVSVTPIQRKKIACVINELDKIIKGFNKERDYIKYQWAPKYSKEFFILFMNIMYSKDFLKYRFNLTFLDLSILYVISSRKNEILNLKDLFESIRFMYPQIVRSVNRLNNKGMLIKERSLADERIVLIKINKIQYNTIKSIFTDTSKILKPRKFFF
>NZ_CP047790.1|WP_000998872.1|2239912_2240269_+|HTH-type-transcriptional-regulator-SarT
MNDLKSKSNIKLMKRVLTTYELRKYLKKYFCLTLDNYLVLAYLDVFKNDEGKYFMRDIISYIGIDQSRIVKSVKELSKKGYLNKCRDPHDSRNVIIVVSVKQHNYIKNLLSEININET
>NZ_CP047790.1|WP_110179771.1|2240573_2244689_+|YSIRK-type-signal-peptide-containing-protein
MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKEVADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQSNPEDLKVSEVTRFNNKSIGKNELTGALQLKNKVSFKNDFEFNIRVANNHQSVTTGADGWGFLFSKGDGNEYLQKGGILGPKGMENSAGFKIDTGYNFKDPMDKEEKQAGQGFKGYGTFVKTGADGTTAKVGTNIPTRGKADNSFQYADNSIDTTDGKFHGQLLNNLKLAYNEKSGIMRAEYAGKVWEANISDLGLDKSEAYNFLITSSQRQGTSQGVYANGWMRTDLNNSTFKLTPNLVKKTEIKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPIDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPDNPGLSKDRAKPNEPVHSMDKNDKVKKSKIAKKSVANQEKKRAELPKTGAESTQKGLIFSSIIGIAGLMLLARRRKN
>NZ_CP047790.1|WP_160195051.1|2245072_2246266_+|MFS-transporter
MLYLEVLKNRNFTYLLIGNFLRRSCFVLFSLQIIWFTVELTNQSSLKLSMMVMSQTLPFIIFGIFGGAYSDKHNKKKILYLSDLILSLIIIIIPLLAITSNLNYLTLLTISTAITIINCYTDPAFRAILPEIIDEEHLATSNELIDSLQRGSNIILPALIGVIVILVGNVGVFFICSILLFLGFIFNALLKYTNNNMIDRHSKEDFSETWEFLKQSKEIPFIIIIQFACILINTGLWRVVLPLFISNILKEGVGVYGLATSCLGIASLLMSLIMGLLSEKRLIFKFSIGVLVWGIGLSIINVFPSVAILYIGATLLGLGQSIEGLTRSVAIQIKTPNHLMGKVFSISSTSNYAADTLSLGLISLIIPLLSLSNIFISGGAIISMLSLAGLKFVKKSM
>NZ_CP047790.1|WP_010956661.1|2246246_2246480_+|hypothetical-protein
MLRSLCKHNRILINAIKVGIEMKYKISLAYNLAIIIGSLIILCILISRGYDIYVILIPILTILASLINLFCDIKKHK
>NZ_CP047790.1|WP_000217723.1|2246586_2246895_-|hypothetical-protein
MTVNIVVSIVFCISMVILGIYVAITKDFTLISYINQTTIADKHKNQIAYIFALCISLSAVFLMSAILCFEYDFIALAFLFLTIALLLIALFYVCFYKITKYP
>NZ_CP047790.1|WP_000678764.1|2247038_2247305_-|hypothetical-protein
MKGSKQILLIMGIISLIVLFIFTLFIMAQYAKHYEQKSDSSNAHTLNSSSAIIEQHTMSNLASLDLYAPVRNITSSRDIHPIYFMTKD
>NZ_CP047790.1|WP_001792493.1|2247588_2249397_-|phospho-sugar-mutase
MHFHTHLLYNTCEKYCLGAVFFYFWDVFLYNSLHKCKGFSFHVLLSLTEILKGCLATMDKELWIERANDSLVKHFYEQQSDIEQREGFESKLTFGTAGIRGKFGLGEGRLNKFTIEKLALGLSRYLNAQTNNPTIVIHYDIRHLSTEFAQIIANVLANHQITVYLPDTYKTTPELSFAVRNLNTTAGIMITASHNPKDYNGIKVYGSDGAQLSTDASELASRYIEEVGDPLQIDIPSSKQNTSYIKPFPKSVTDDYMKHIQNMIGYIPKSDLQVVFTSLHGTSVPIVPELLKSLNFNQFNLVEAQCKPDPNFSSVQSANPEDHRAFDQAVELANKSHADLLISTDPDADRLGIAERDAHGHITYFNGNQIGALLLNYRIQQTSQLRHRLMIQSIVSSELTKSLARYNNVEYKEVLTGFKFIAQEIRQLDDHQNMIFAFEESYGFLSEPFVRDKDAVQIVPLIIKYASELKLYGKTLKDELEQIYQTVGRHEDTLFSHTLEGLEGKKKIESIMTHFRSNPPQEIQGLKVKAIEDYLTSEVYHLDKDTTSQINSPKSNVIRVLFDEGFIALRPSGTEPKIKLYVSLKCPNFDDVAQKINAMIFS

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Crispr_ID: NZ_CP047790_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047790_9

2595361-2595451

Orphan

Consensus_repeat	Method
AAGAAGCCCCTAACAACTAAAGTTG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP047790_9

>merge|NZ_CP047790|9|2595361-2595451|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTGAAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCATAAGAGCCCCTAACAACTAAAGTTG

>NZ_CP047790|9|8|2595361-2595451|CRISPRCasFinder
AAGAAGCCCCTAACAACTAAAGTTG	AAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCA
TAAGAGCCCCTAACAACTAAAGTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047790.1\|WP_000908189.1\|2591718_2592501_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044
NZ_CP047790.1\|WP_000083807.1\|2587462_2589001_-\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP047790.1\|WP_000370928.1\|2592568_2593426_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP047790.1\|WP_000160304.1\|2604257_2604968_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP047790.1\|WP_049308177.1\|2575970_2583425_+\|DUF1542-domain-containing-protein	unknown	unknown	gnl\|CDD\|275089
NZ_CP047790.1\|WP_000019743.1\|2596824_2597805_-\|CDF-family-zinc-efflux-transporter-CzrB	unknown	unknown	gnl\|CDD\|224151
NZ_CP047790.1\|WP_001292149.1\|2584849_2585284_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
NZ_CP047790.1\|WP_000927361.1\|2585295_2587428_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP047790.1\|WP_000003755.1\|2597806_2598127_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP047790.1\|WP_000808817.1\|2600348_2600579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_000123402.1\|2601250_2602624_+\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_CP047790.1\|WP_000495681.1\|2595467_2596559_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001127964.1\|2599379_2600318_+\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
NZ_CP047790.1\|WP_001024095.1\|2598278_2598944_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_CP047790.1\|WP_001802298.1\|2594921_2595026_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_001123301.1\|2603080_2603494_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NZ_CP047790.1\|WP_000334465.1\|2589681_2591487_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP047790.1\|WP_001792784.1\|2594083_2594242_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047790.1\|WP_160195062.1\|2583743_2584850_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP047790.1\|WP_000070866.1\|2603693_2604137_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854

Protein	Function_ID	Function_description	E-value
NZ_CP047790.1\|WP_000908189.1\|2591718_2592501_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	3.34326e-106
NZ_CP047790.1\|WP_000083807.1\|2587462_2589001_-\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP047790.1\|WP_000370928.1\|2592568_2593426_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	1.99434e-58
NZ_CP047790.1\|WP_000160304.1\|2604257_2604968_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
NZ_CP047790.1\|WP_049308177.1\|2575970_2583425_+\|DUF1542-domain-containing-protein	gnl\|CDD\|275089	TIGR04263, cell_wall_surface_anchor_family_protein, SasC/Mrp/FmtB intercellular aggregation domain. This domain, about 375 amino acids long on average, occurs only in Staphylococcus and Streptococcus. It occurs as a non-repetitive N-terminal domain of LPXTG-anchored surface proteins, including SasC, Mrp, and FmtB. This region in SasC was shown to be involved in cell aggregation and biofilm formation, which may explain the methicillin resistance seen for Mrp and FmtB.	1.98617e-108
NZ_CP047790.1\|WP_000019743.1\|2596824_2597805_-\|CDF-family-zinc-efflux-transporter-CzrB	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.20197e-108
NZ_CP047790.1\|WP_001292149.1\|2584849_2585284_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_CP047790.1\|WP_000927361.1\|2585295_2587428_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	1.10767e-67
NZ_CP047790.1\|WP_000070866.1\|2603693_2604137_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
NZ_CP047790.1\|WP_000123402.1\|2601250_2602624_+\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.86989e-06
NZ_CP047790.1\|WP_001127964.1\|2599379_2600318_+\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	3.25063e-129
NZ_CP047790.1\|WP_001024095.1\|2598278_2598944_+\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.27122e-47
NZ_CP047790.1\|WP_000003755.1\|2597806_2598127_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.83702e-17
NZ_CP047790.1\|WP_000334465.1\|2589681_2591487_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP047790.1\|WP_001123301.1\|2603080_2603494_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	1.45785e-45
NZ_CP047790.1\|WP_160195062.1\|2583743_2584850_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0

>NZ_CP047790.1|WP_001802298.1|2594921_2595026_+|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_CP047790.1|WP_001792784.1|2594083_2594242_-|hypothetical-protein
MSKSSDALFNSLTQSFELIEGVYNELVTDNLKIVMYKPRKESTSGRINRRFK
>NZ_CP047790.1|WP_000370928.1|2592568_2593426_+|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITTFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQDETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAKHFLAD
>NZ_CP047790.1|WP_000908189.1|2591718_2592501_+|ABC-transporter-ATP-binding-protein
MLIQLDQVGRMKQGKTILKNISWQINGGDKWILYGLNGAGKTTLLNILNAYEPATTGDVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSESYPTLAMIYVTHFIEEITSNFTKILLLKDGKSVQQGLIDDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_CP047790.1|WP_000334465.1|2589681_2591487_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_CP047790.1|WP_000083807.1|2587462_2589001_-|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_CP047790.1|WP_000927361.1|2585295_2587428_-|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFADLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDIDGNTSFENEQTSYLTSVFEKHLSDEKSEQLMHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDAINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMVLITVLEEPLILPSIQNDNQTIKYMISMFIPDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_CP047790.1|WP_001292149.1|2584849_2585284_-|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_CP047790.1|WP_160195062.1|2583743_2584850_-|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFTNSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFAGKATVLDAVKDSSIEAGLRRVLAETSQYITIEFDFTEAEQAGYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS
>NZ_CP047790.1|WP_049308177.1|2575970_2583425_+|DUF1542-domain-containing-protein
MNLFRQQKFSIRKFNVGIFSALIATVTFISTNPTTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPTAQPAAPANQGQPAVQPANQGGQANPAGGAAQPNTQPAGQGNQADPNNAAQAQPGNQATPANQAGQGNNQATPNNNATPANQTQPANAPAAAQPAAQPAAPVAANAQTQDPNASNTGEGSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIGFVNSELRRSDMFDKNNPQNYQAKGNVAALGRVNANDSTDHGNFNGISKTVNVKPDSELIINFTTMQTNSKQGATNLVIKDAKKNTELATVNVAKTGTAHLFKVPTDADRLDLQFIPDNTAVADASRITTNKDGYKYYSFIDNVGLFSGSHLYVKNRDLAPKATNNKEYTINTEIGNNGNFGASLKADQFKYEVTLPQGVTYVNDSLTTTFPNGNEDSTVLKNMTVNYDQNANKVTFTSQGVTTARGTHTKEVLFPDKSLKLSYKVNVANIDTPKNIDFNEKLTYRTASDVVINNTQPEITLTADPFSVAVEMNKDALQQQVNSQVDNSHYTTASIAEYNKLKQQADTILNEDANHVETANRASQADIDGLVTKLQAALIDNQAAIAELDAKAQEKVTAAQQSKKVTQDEVAALVTKINNDKNNAIAEINKQTTSQGVTTEKDNGIAVLEQDVITPTVKPQAKQDIIQAVTTRKQQIKKSNASLQDEKDVANDKIGKIETKAIKDIDAATTNAQVEAIKTKAINDINQTTPATTAKAAALEEFDEVVQAQIDQAPLNPDTTNEEVAEAIERINAAKVSGVKAIEATTTAQDLERVKNEEISKIENITDSTQTKMDAYNEVKQAATARKAQNATVSNATNEEVAEADAAVDAAQKQGLHDIQVVKSKQEVADTKSKVIDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNASTTEEKQAAYTELDTKKQEARTNLDAANTNSDVTTAKDNGIAAINQVQAATTKKSDAKAEIAQKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNATANTDVDNAKTTNEATIAAITPDANVKPQAKQAIADKVQAQETAIDANNGSTTEEKTAAKQQAQTEKTTADAAIDAAHTNAEVEAAKNAEIAKIEAIQPATTTKDNAKEAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGETSIDQVTPTVNKKATARNEITTILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATTEEKEAAIQQLATAVTDAKNNITAATDDNGVDQAKDAGKNSIQSTQPATAVKSNAKNDVDQAVTTQNQAIDNTTGATTEEKNAAKDLVLKAKEKAYQDILNAQTTNDVTQIKDQAVADIQGITADTTIKDVAKDELATKANEQKALIAQTADATTEEKEQANQQVDAQLTQGNQNIENAQSIDDVNTAKENAIQAIDPIQASTDVKTNARAELLTEMQNKITEILSDNTTTNEEKGKDIEPVRATYEEGLNNINTANTTGDVTTAKDTAVQKVQQLHANPVKKPAGKTALDQAAADRKTQIEQTPNASQQEINDAKQEVDAALNQAKTNVDQSSTNEYVDNAVKEGKAKINAVKTFSEYKKDALAKIADAYNAKVNEADNSNASTSSEIAEAKQKLAELKQTADQNVNQATSKDDIEVQIHNDLDNINDYTIPTGKKETATTDLYAYADQKKNNISADTNATQDEKQQAIKQVDQNVQTALESINNGVDNGDVDDALTQGKAAIDAIQVDATVKPKANQAIEVKAEDTKESIDQSDQLTAEEKTEALAMIKQITDQAKQGITDATTTAEVEKAKAQGLEAFDNIQIDSTEKQKAIEELETALDQIEAGVNVDADATTEEKEAFTNALEDILSKATEDISDQTTNAEIATVKNSALEQLKAQRINPEVKKNALEAIREVVNKQIEIIKNADADASAKEIARTDLGRYFDRFADKLDKTQTNAEVAELQNVTIPAIEAIVPQNDPDANDTNNGIDNNDATANSNANATPENTGQPNVSETTDNGKADASPTTPNNSDAATGETTATSATDDANDKPQANNNSSVDASTNSPTMDNDVTSKPEVESTNNGTTDKPVTETDNATPAESTTNNNSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQSTNGKVAQPKSENKAKAEKDGRDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEESTTNQTDAGQLKSETNVASNEADKSPSKADTEVSNKPSTSASSEAKDKMTSTNVSQKDDTATADTNDTQTSVGPVANNKAKDMQTNDMKASLATVSNGSNSANQDMLNVTNTDDHQAKTKSAQQGKVNKPKQQAKTLPDTGMSHNDDLPYAELALGAGMAFLIRRFTKKDQQTEE
>NZ_CP047790.1|WP_000495681.1|2595467_2596559_-|hypothetical-protein
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYVQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKETTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>NZ_CP047790.1|WP_000019743.1|2596824_2597805_-|CDF-family-zinc-efflux-transporter-CzrB
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHAH
>NZ_CP047790.1|WP_000003755.1|2597806_2598127_-|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA
MSEQYSEIHTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>NZ_CP047790.1|WP_001024095.1|2598278_2598944_+|SDR-family-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGEQDIKDALTQFEIEKD
>NZ_CP047790.1|WP_001127964.1|2599379_2600318_+|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQRGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>NZ_CP047790.1|WP_000808817.1|2600348_2600579_+|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>NZ_CP047790.1|WP_000123402.1|2601250_2602624_+|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRMSNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>NZ_CP047790.1|WP_001123301.1|2603080_2603494_+|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWFVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>NZ_CP047790.1|WP_000070866.1|2603693_2604137_+|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>NZ_CP047790.1|WP_000160304.1|2604257_2604968_-|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047790_2	2.1\|892321\|26\|NZ_CP047790\|CRISPRCasFinder	892321-892346	26	NZ_CP047790.1	682357-682382	0	1.0
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	682449-682479	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	892355-892385	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	1373775-1373805	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	1650430-1650460	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	415080-415110	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	992813-992843	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	2203162-2203192	1	0.968
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	2490565-2490595	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	682449-682479	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	892355-892385	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	1373775-1373805	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	1650430-1650460	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	415080-415110	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	992813-992843	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	2203162-2203192	1	0.968
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	2490565-2490595	1	0.968
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	239010-239041	1	0.969
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	1650257-1650288	1	0.969
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	1650312-1650343	1	0.969
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	87245-87269	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	415013-415037	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	593875-593899	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	593933-593957	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	992746-992770	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1203374-1203398	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1203432-1203456	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	2490615-2490639	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	239029-239053	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	682522-682546	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1373848-1373872	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1650276-1650300	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1650331-1650355	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1869797-1869821	1	0.96
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	2152668-2152692	1	0.96
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	1161161-1161191	2	0.935
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	1203499-1203529	2	0.935
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NZ_CP047790.1	2479648-2479678	2	0.935
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	1161161-1161191	2	0.935
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	1203499-1203529	2	0.935
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NZ_CP047790.1	2479648-2479678	2	0.935
NZ_CP047790_2	2.1\|892321\|26\|NZ_CP047790\|CRISPRCasFinder	892321-892346	26	NZ_CP047790.1	1161257-1161282	2	0.923
NZ_CP047790_2	2.1\|892321\|26\|NZ_CP047790\|CRISPRCasFinder	892321-892346	26	NZ_CP047790.1	1112528-1112553	2	0.923
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	77908-77939	2	0.938
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	1203386-1203417	2	0.938
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	1373829-1373860	2	0.938
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	1869778-1869809	2	0.938
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	2152649-2152680	2	0.938
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	NZ_CP047790.1	2479707-2479738	2	0.938
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	678032-678056	2	0.92
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	1196233-1196257	2	0.92
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	NZ_CP047790.1	2479695-2479719	2	0.92

1. spacer 2.1|892321|26|NZ_CP047790|CRISPRCasFinder matches to position: 682357-682382, mismatch: 0, identity: 1.0

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctatgttggggccccg	Protospacer
**************************

2. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 682449-682479, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

3. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 892355-892385, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

4. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 1373775-1373805, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

5. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 1650430-1650460, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

6. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 415080-415110, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

7. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 992813-992843, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

8. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 2203162-2203192, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

9. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 2490565-2490595, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

10. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 682449-682479, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

11. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 892355-892385, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

12. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 1373775-1373805, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

13. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 1650430-1650460, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

14. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 415080-415110, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

15. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 992813-992843, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

16. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 2203162-2203192, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

17. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 2490565-2490595, mismatch: 1, identity: 0.968

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcttacaataatgtg	Protospacer
**********************.********

18. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 239010-239041, mismatch: 1, identity: 0.969

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacagacaatgcaagt	Protospacer
********************.***********

19. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 1650257-1650288, mismatch: 1, identity: 0.969

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaagcaatgcaagt	Protospacer
*********************.**********

20. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 1650312-1650343, mismatch: 1, identity: 0.969

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaagcaatgcaagt	Protospacer
*********************.**********

21. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 87245-87269, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

22. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 415013-415037, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

23. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 593875-593899, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

24. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 593933-593957, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

25. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 992746-992770, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

26. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1203374-1203398, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

27. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1203432-1203456, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

28. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 2490615-2490639, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

29. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 239029-239053, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

30. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 682522-682546, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

31. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1373848-1373872, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

32. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1650276-1650300, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcgaaaagaaa	Protospacer
***** *******************

33. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1650331-1650355, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcgaaaagaaa	Protospacer
***** *******************

34. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1869797-1869821, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

35. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 2152668-2152692, mismatch: 1, identity: 0.96

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

36. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 1161161-1161191, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacggaaagtcagcttacaataatgtg	Protospacer
********.*************.********

37. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 1203499-1203529, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agcttacgaaaagtcagcttacaataatgtg	Protospacer
**** *****************.********

38. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to position: 2479648-2479678, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcatacaataatgtg	Protospacer
****************** ***.********

39. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 1161161-1161191, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacggaaagtcagcttacaataatgtg	Protospacer
********.*************.********

40. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 1203499-1203529, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agcttacgaaaagtcagcttacaataatgtg	Protospacer
**** *****************.********

41. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to position: 2479648-2479678, mismatch: 2, identity: 0.935

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
agctgacgaaaagtcagcatacaataatgtg	Protospacer
****************** ***.********

42. spacer 2.1|892321|26|NZ_CP047790|CRISPRCasFinder matches to position: 1161257-1161282, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcttctgtgttggggcaccg	Protospacer
************.********* ***

43. spacer 2.1|892321|26|NZ_CP047790|CRISPRCasFinder matches to position: 1112528-1112553, mismatch: 2, identity: 0.923

ccgccagcttctatgttggggccccg	CRISPR spacer
ccgccagcctctgtgttggggccccg	Protospacer
********.***.*************

44. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 77908-77939, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaggaaattctacagacaatgcaagt	Protospacer
********.***********.***********

45. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 1203386-1203417, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaggcaatgcaagt	Protospacer
********************..**********

46. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 1373829-1373860, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaggcaatgcaagt	Protospacer
********************..**********

47. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 1869778-1869809, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaggcaatgcaagt	Protospacer
********************..**********

48. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 2152649-2152680, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaggcaatgcaagt	Protospacer
********************..**********

49. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to position: 2479707-2479738, mismatch: 2, identity: 0.938

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcaaaaagaaattctacagacaatgcaagt	Protospacer
****.***************.***********

50. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 678032-678056, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgataagaaa	Protospacer
***** ************ ******

51. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 1196233-1196257, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaatgaaa	Protospacer
***** ************** ****

52. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to position: 2479695-2479719, mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacatagagaatttcaaaaagaaa	Protospacer
***** **********.********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047790_7	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	LC371242	Escherichia phage EcS1 DNA, complete sequence	15447-15471	2	0.92
NZ_CP047790_1	1.1\|88604\|31\|NZ_CP047790\|PILER-CR	88604-88634	31	NC_008443	Borrelia burgdorferi strain Ip21 plasmid, complete sequence	5653-5683	8	0.742
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	NC_021536	Synechococcus phage S-IOM18 genomic sequence	159749-159779	8	0.742
NZ_CP047790_1	1.2\|88660\|31\|NZ_CP047790\|PILER-CR	88660-88690	31	LN846932	Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome	10622-10652	8	0.742
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	NC_021536	Synechococcus phage S-IOM18 genomic sequence	159749-159779	8	0.742
NZ_CP047790_1	1.3\|88652\|31\|NZ_CP047790\|CRISPRCasFinder	88652-88682	31	LN846932	Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome	10622-10652	8	0.742
NZ_CP047790_1	1.1\|88604\|31\|NZ_CP047790\|PILER-CR	88604-88634	31	NZ_CP017210	Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence	2024-2054	9	0.71
NZ_CP047790_5	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	MN693281	Marine virus AFVG_25M371, complete genome	6448-6479	9	0.719

1. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to LC371242 (Escherichia phage EcS1 DNA, complete sequence) position: , mismatch: 2, identity: 0.92

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacaaaaagaatttcgtaaagaaa	Protospacer
*******.********* *******

2. spacer 1.1|88604|31|NZ_CP047790|PILER-CR matches to NC_008443 (Borrelia burgdorferi strain Ip21 plasmid, complete sequence) position: , mismatch: 8, identity: 0.742

gaatttcaaaaaagaaattctacaggcaata	CRISPR spacer
caatttcaaaaaagaaattttccacaaagtg	Protospacer
 ******************.* ** . *.*.

3. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 8, identity: 0.742

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
gcttgacgaaaactcaccttacgataaaatt	Protospacer
. .********* *** ********** .*

4. spacer 1.2|88660|31|NZ_CP047790|PILER-CR matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 8, identity: 0.742

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
tgaagacgaaaaatcagattacgataaatta	Protospacer
 *  ********.**** *********  *.

5. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to NC_021536 (Synechococcus phage S-IOM18 genomic sequence) position: , mismatch: 8, identity: 0.742

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
gcttgacgaaaactcaccttacgataaaatt	Protospacer
. .********* *** ********** .*

6. spacer 1.3|88652|31|NZ_CP047790|CRISPRCasFinder matches to LN846932 (Carnobacterium maltaromaticum strain LMA28 LMA_pa plamid, complete genome) position: , mismatch: 8, identity: 0.742

agctgacgaaaagtcagcttacgataatgtg	CRISPR spacer
tgaagacgaaaaatcagattacgataaatta	Protospacer
 *  ********.**** *********  *.

7. spacer 1.1|88604|31|NZ_CP047790|PILER-CR matches to NZ_CP017210 (Borreliella burgdorferi strain B331 plasmid B331_cp9, complete sequence) position: , mismatch: 9, identity: 0.71

gaatttcaaaaaagaaattctacaggcaata	CRISPR spacer
caatttcaaaaaagaaatattacacagggtg	Protospacer
 ***************** .**** . ..*.

8. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 9, identity: 0.719

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
cacttagaagaaatcctacaaacaatgcaaaa	Protospacer
. .. *.*******.***************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 45498

Staphylococcus_phage(90.91%)

head,terminase,tail,capsid,transposase,integrase,portal,protease,holin

attL 33602:33618|attR 51354:51370

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039702440.1\|0_1662_+\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	99.8
WP_000025274.1\|1677_2865_+\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	1.0e-219	100.0
WP_000642728.1\|2848_3586_+\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	1.8e-129	100.0
WP_000154559.1\|3609_4755_+\|capsid	phage major capsid protein	G4KNQ3	Staphylococcus_phage	9.6e-215	100.0
WP_000238236.1\|4774_5059_+	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
WP_000150936.1\|5048_5333_+\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000755150.1\|5316_5679_+\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000114227.1\|5675_6080_+	hypothetical protein	G4KNQ5	Staphylococcus_phage	2.1e-68	99.3
WP_000565498.1\|6076_6484_+	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000268741.1\|6484_7129_+\|tail	phage tail protein	W5R9H4	Staphylococcus_phage	6.5e-120	100.0
WP_072050172.1\|7170_7395_+	hypothetical protein	A0A075LYE8	Staphylococcus_phage	8.8e-32	98.6
WP_001096355.1\|7444_7795_+	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_039702442.1\|8039_12569_+\|tail	phage tail tape measure protein	A0A1X9H084	Staphylococcus_phage	0.0e+00	99.9
WP_000567408.1\|12565_14050_+\|tail	phage tail protein	A0A2I6PDJ0	Staphylococcus_phage	1.2e-297	100.0
WP_000582165.1\|14065_17851_+	hypothetical protein	A0A1X9H0H3	Staphylococcus_phage	0.0e+00	98.5
WP_001153681.1\|17840_17993_+	hypothetical protein	D2JLG0	Staphylococcus_phage	5.2e-20	100.0
WP_001040261.1\|18039_18327_+	hypothetical protein	D2JLG1	Staphylococcus_phage	1.3e-43	100.0
WP_000539688.1\|18384_18681_+	DUF2951 domain-containing protein	D2JLG2	Staphylococcus_phage	2.9e-46	100.0
WP_011447039.1\|18830_19007_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_001791821.1\|19059_19167_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|19218_19473_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|19484_20240_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_039702443.1\|20430_20922_+	staphylokinase	A0A1X9H028	Staphylococcus_phage	2.8e-86	99.4
WP_020444758.1\|21448_21907_+	amidase	R9QTN8	Staphylococcus_phage	4.9e-85	98.7
WP_000727649.1\|22001_22451_-	chemotaxis-inhibiting protein CHIPS	A0A1P8L6A8	Staphylococcus_phage	1.1e-78	100.0
WP_000702263.1\|23134_23485_+	complement inhibitor SCIN-A	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|23537_23798_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000669791.1\|24108_24288_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	1.4e-24	98.3
WP_160194973.1\|25245_26994_+	MAP domain-containing protein	NA	NA	NA	NA
WP_001068523.1\|27618_28905_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000990056.1\|29104_29203_+	hypothetical protein	NA	NA	NA	NA
WP_000681968.1\|29445_29622_+	hypothetical protein	NA	NA	NA	NA
WP_000691584.1\|29880_30261_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000991301.1\|30257_31154_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000645733.1\|31154_31835_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000763048.1\|31831_32704_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_001221651.1\|32703_33444_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
WP_000182842.1\|33509_34073_-	thioredoxin family protein	NA	NA	NA	NA
33602:33618	attL	NA	NA	NA	NA
WP_000966288.1\|34193_34718_+	membrane protein	NA	NA	NA	NA
WP_001033971.1\|34777_35335_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_000713072.1\|35331_36174_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_001188043.1\|36230_37271_-	linear amide C-N hydrolase	NA	NA	NA	NA
WP_000267034.1\|37721_37895_+	hypothetical protein	NA	NA	NA	NA
WP_000289001.1\|38401_39553_+\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	9.0e-11	31.0
WP_160195067.1\|39591_41619_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000514485.1\|41627_41993_+	hypothetical protein	NA	NA	NA	NA
WP_014667729.1\|42021_42441_-	YolD-like family protein	U3PG23	Staphylococcus_phage	1.1e-30	54.2
WP_049308183.1\|42922_44602_+\|transposase	IS1182 family transposase	A0ZS58	Staphylococcus_virus	1.9e-243	77.4
WP_000733621.1\|44652_45498_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	3.4e-31	34.3
51354:51370	attR	NA	NA	NA	NA

DBSCAN-SWA_2

52117 : 54147

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000149686.1\|52117_52678_-	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_000275706.1\|53049_54147_+	pectate lyase	U5PWM6	Bacillus_phage	2.5e-47	34.9

DBSCAN-SWA_3

58177 : 60461

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284433.1\|58177_59647_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	3.5e-108	45.1
WP_000040866.1\|59639_60461_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	2.3e-69	52.7

DBSCAN-SWA_4

64163 : 70930

Gordonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000572878.1\|64163_65459_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9
WP_001165363.1\|65567_65870_+	hypothetical protein	NA	NA	NA	NA
WP_000272071.1\|66041_66734_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_000992921.1\|66730_68923_+	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
WP_000774565.1\|68926_70930_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	5.8e-114	36.1

DBSCAN-SWA_5

78047 : 83075

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001231455.1\|78047_78995_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.2e-16	27.8
WP_001147865.1\|79075_80437_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.4e-103	43.6
WP_000548781.1\|80606_81137_+	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_000140181.1\|81383_82454_+	DNA polymerase IV	NA	NA	NA	NA
WP_160194974.1\|82520_83075_-	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	1.2e-29	35.7

DBSCAN-SWA_6

86527 : 86941

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025173836.1\|86527_86941_+	hypothetical protein	A0A1Q1PVU5	Staphylococcus_phage	5.1e-17	39.1

DBSCAN-SWA_7

91992 : 92622

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153530.1\|91992_92622_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-06	30.8

DBSCAN-SWA_8

108102 : 109839

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000597238.1\|108102_109839_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4

DBSCAN-SWA_9

126448 : 180962

Staphylococcus_phage(86.36%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144055.1\|126448_127177_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7
WP_020978252.1\|127312_128455_+\|tRNA	tRNA epoxyqueuosine(34) reductase QueG	NA	NA	NA	NA
WP_000181394.1\|128459_128930_+\|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	NA	NA	NA	NA
WP_001251229.1\|129087_129687_+	glucosamine-6-phosphate isomerase	NA	NA	NA	NA
WP_000031108.1\|129711_129864_+	hypothetical protein	NA	NA	NA	NA
WP_000901023.1\|130697_131093_+	hypothetical protein	NA	NA	NA	NA
WP_000116231.1\|131288_132674_+	class II fumarate hydratase	NA	NA	NA	NA
WP_000669376.1\|133126_133948_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_000437968.1\|134110_135223_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_001045133.1\|135244_135868_+	response regulator transcription factor	NA	NA	NA	NA
WP_000375864.1\|136223_136688_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_064127899.1\|136866_137991_+	DUF445 domain-containing protein	NA	NA	NA	NA
WP_000290301.1\|138059_138404_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7
WP_001802255.1\|138896_138995_+	hypothetical protein	NA	NA	NA	NA
WP_000238230.1\|139285_140482_+	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_000584638.1\|140471_143408_+	AAA family ATPase	NA	NA	NA	NA
WP_001244175.1\|143404_144346_+	3'-5' exoribonuclease YhaM	NA	NA	NA	NA
WP_000782127.1\|144466_145429_-	foldase	NA	NA	NA	NA
WP_160194975.1\|145633_146191_-	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_000648118.1\|146923_147289_-	YtxH domain-containing protein	NA	NA	NA	NA
WP_000004981.1\|147430_147853_-	HIT family protein	NA	NA	NA	NA
WP_000216873.1\|147986_148727_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-24	29.8
WP_000551840.1\|148719_149943_+	ABC transporter permease	NA	NA	NA	NA
WP_160194976.1\|150066_150570_-	signal transduction protein TraP	NA	NA	NA	NA
WP_001790154.1\|150732_150843_+	hypothetical protein	NA	NA	NA	NA
WP_000233526.1\|150832_151870_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA
WP_000162881.1\|151927_152851_+	ferrochelatase	NA	NA	NA	NA
WP_000167545.1\|152874_154275_+	protoporphyrinogen oxidase	NA	NA	NA	NA
WP_000132890.1\|154595_155150_+	serine hydrolase family protein	NA	NA	NA	NA
WP_129409671.1\|156500_157283_+	staphylococcal enterotoxin type O	A0A1X9H080	Staphylococcus_phage	1.4e-31	36.7
WP_000821658.1\|157563_158283_+	staphylococcal enterotoxin type M	A0A1X9H080	Staphylococcus_phage	2.3e-25	35.8
WP_000713847.1\|158317_159046_+	staphylococcal enterotoxin type I	A0A1X9H080	Staphylococcus_phage	1.1e-27	39.2
WP_000764689.1\|159199_159970_+	staphylococcal enterotoxin type C1/U	A0A097PAT7	Streptococcus_pyogenes_phage	1.4e-44	43.2
WP_001236364.1\|160008_160764_+	staphylococcal enterotoxin type N	A0A075M4C7	Staphylococcus_phage	1.0e-39	41.0
WP_000736710.1\|161046_161823_+	staphylococcal enterotoxin type G	NA	NA	NA	NA
WP_000848315.1\|162374_163151_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_000617704.1\|163171_163408_-	hypothetical protein	NA	NA	NA	NA
WP_001253432.1\|163485_163980_-	hypothetical protein	NA	NA	NA	NA
WP_001792814.1\|164507_164636_-\|transposase	IS3 family transposase	A0A2H4PQU1	Staphylococcus_phage	6.6e-08	66.7
WP_000209099.1\|164813_165602_-	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	1.3e-138	95.0
WP_000473596.1\|166965_167901_+	beta-channel forming cytolysin	A0A2H4PQI5	Staphylococcus_phage	1.4e-174	100.0
WP_000782463.1\|167902_168886_+	bi-component leukocidin LukED subunit D	A0A2H4PQH7	Staphylococcus_phage	1.8e-185	99.4
WP_000543854.1\|169256_170048_-	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_000550252.1\|170052_170526_-	hypothetical protein	NA	NA	NA	NA
WP_000469595.1\|170781_171000_+	hypothetical protein	A0A2H4PQH0	Staphylococcus_phage	1.4e-26	81.9
WP_001092759.1\|171473_172052_-	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	1.9e-49	59.6
WP_001039432.1\|173016_173724_+\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	1.6e-127	97.9
WP_001039444.1\|173848_174571_+\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	6.4e-132	100.0
WP_001038867.1\|174628_175348_+\|protease	serine protease SplC	A0A2H4PQP7	Staphylococcus_phage	1.2e-130	99.2
WP_001038706.1\|175468_176188_+\|protease	serine protease SplD	A0A2H4PQP9	Staphylococcus_phage	5.1e-129	99.2
WP_011447030.1\|176136_176244_-	hypothetical protein	NA	NA	NA	NA
WP_160194977.1\|176345_177062_+\|protease	serine protease SplE	A0A2H4PQN5	Staphylococcus_phage	7.0e-131	98.7
WP_001038713.1\|177212_177932_+\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.0e-129	98.3
WP_001791797.1\|177996_178131_+	hypothetical protein	NA	NA	NA	NA
WP_160194978.1\|178111_179851_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.2e-285	98.6
WP_000072558.1\|179843_180962_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	7.6e-39	35.1

DBSCAN-SWA_10

186195 : 218162

Staphylococcus_phage(93.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000864139.1\|186195_186753_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	3.1e-78	97.5
WP_000414206.1\|186950_187523_-	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	1.6e-24	93.1
WP_000627547.1\|187623_187965_-	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	3.9e-55	95.6
WP_000669021.1\|188005_188632_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	1.3e-88	91.3
WP_000070648.1\|188705_189701_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	9.6e-70	94.4
WP_001789021.1\|189781_190432_-	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	5.2e-56	98.6
WP_072460539.1\|190734_191190_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	1.0e-79	99.3
WP_000348363.1\|191348_192827_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.5e-284	98.2
WP_000778537.1\|192831_193833_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	5.1e-188	98.8
WP_000718107.1\|193829_194087_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000672015.1\|194152_194626_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	5.5e-84	99.4
WP_072384924.1\|194630_195377_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	4.4e-144	100.0
WP_000109906.1\|195629_197222_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
WP_000933822.1\|197593_198787_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
WP_000366163.1\|198911_199820_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.4e-138	100.0
WP_000453317.1\|200031_200865_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	3.5e-158	99.6
WP_000623477.1\|202862_203216_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	1.0e-21	94.9
WP_001200542.1\|203212_203578_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
WP_000091445.1\|203833_204136_-	hypothetical protein	NA	NA	NA	NA
WP_001096494.1\|204395_205109_+	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_001168907.1\|205548_206184_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001030469.1\|206479_206923_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	2.4e-57	98.6
WP_001153742.1\|206909_207353_-	competence protein ComK	NA	NA	NA	NA
WP_000671052.1\|207465_207936_-	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
WP_000384171.1\|208134_208359_+	hypothetical protein	NA	NA	NA	NA
WP_001032833.1\|208634_209489_+	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000989121.1\|209575_210868_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
WP_000221177.1\|210867_211182_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	9.8e-53	98.1
WP_001261668.1\|211704_213207_+	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	1.9e-29	98.6
WP_000384185.1\|213699_214731_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	4.0e-196	98.8
WP_000493892.1\|214737_215370_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.7e-112	99.5
WP_001159022.1\|215380_216562_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.6e-227	99.7
WP_001008551.1\|216574_217039_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
WP_001196354.1\|217160_218162_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7

DBSCAN-SWA_11

221323 : 235443

Staphylococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000764419.1\|221323_221887_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
WP_000526538.1\|221883_222837_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	6.4e-79	99.3
WP_001025061.1\|222946_224128_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.6e-218	100.0
WP_001108725.1\|224418_226839_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.7
WP_000836465.1\|226860_227172_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	1.6e-52	100.0
WP_160194979.1\|227497_234058_+	LPXTG-anchored repetitive surface protein SasC	A0A2H4PQU6	Staphylococcus_phage	2.3e-308	98.2
WP_000285016.1\|234174_235443_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	4.1e-57	100.0

DBSCAN-SWA_12

246967 : 252295

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160194980.1\|246967_247825_+	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	5.7e-71	99.3
WP_001048368.1\|247853_248450_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_000118309.1\|248470_252295_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.6e-83	47.0

DBSCAN-SWA_13

261035 : 262742

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000862084.1\|261035_262742_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	2.1e-274	99.8

DBSCAN-SWA_14

269349 : 271980

Cronobacter_phage(50.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186031.1\|269349_270612_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	6.0e-85	42.1
WP_001279338.1\|270705_271980_-\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	1.7e-10	29.0

DBSCAN-SWA_15

275749 : 279884

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808837.1\|275749_277354_-	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.2e-114	100.0
WP_000291417.1\|277340_278501_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_000553922.1\|278614_279061_-	OsmC family protein	NA	NA	NA	NA
WP_000174282.1\|279140_279884_+	glycerophosphoryl diester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	4.9e-18	30.0

DBSCAN-SWA_16

297367 : 300565

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000226912.1\|297367_300565_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	3.8e-136	30.7

DBSCAN-SWA_17

305498 : 307256

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001232648.1\|305498_307256_+	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	2.6e-41	100.0

DBSCAN-SWA_18

312140 : 320304

Feldmannia_irregularis_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000080028.1\|312140_312845_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.6e-07	28.7
WP_015445861.1\|312844_314506_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	5.8e-35	39.4
WP_000849439.1\|315004_316492_+	hypothetical protein	NA	NA	NA	NA
WP_001038289.1\|316785_319416_+	DNA polymerase I	A8E2B3	Enterococcus_phage	6.1e-47	33.0
WP_001114467.1\|319431_320304_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	2.0e-42	38.2

DBSCAN-SWA_19

324219 : 335371

Brevibacillus_phage(20.0%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808624.1\|324219_325140_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	2.8e-31	29.7
WP_001790562.1\|325232_325355_+	hypothetical protein	NA	NA	NA	NA
WP_000435132.1\|325551_327489_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	7.8e-116	36.0
WP_160194985.1\|327914_329408_+	amino acid permease	NA	NA	NA	NA
WP_001791162.1\|329636_330164_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.1e-11	33.1
WP_001125540.1\|330192_330393_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_001138360.1\|330439_330796_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_000032657.1\|330937_331546_+	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	6.6e-21	35.9
WP_001280022.1\|331564_332494_+	hypothetical protein	NA	NA	NA	NA
WP_001790560.1\|332498_332609_+	hypothetical protein	NA	NA	NA	NA
WP_000127573.1\|332656_333958_+	trigger factor	NA	NA	NA	NA
WP_000472302.1\|334108_335371_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.0e-140	62.0

DBSCAN-SWA_20

344938 : 347569

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000425353.1\|344938_347569_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.7

DBSCAN-SWA_21

358415 : 393851

uncultured_Mediterranean_phage(18.75%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001005767.1\|358415_359420_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001019178.1\|359421_360447_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001112049.1\|360469_361609_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.6e-84	44.7
WP_001160682.1\|361627_361888_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_000749795.1\|362162_364442_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_000595005.1\|364644_366915_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.4e-63	29.3
WP_000364542.1\|366936_367455_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
WP_001058587.1\|367882_370072_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
WP_000869983.1\|370083_370536_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_000717800.1\|370532_371408_+	cell wall amidase	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
WP_000590824.1\|371868_373131_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000044799.1\|373146_374913_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.3e-16	27.3
WP_031824596.1\|375245_375374_+	hypothetical protein	NA	NA	NA	NA
WP_000682646.1\|375373_376147_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_000102735.1\|376307_377582_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.8e-105	50.7
WP_000704122.1\|377666_378089_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000752909.1\|378188_378371_+	CsbD family protein	NA	NA	NA	NA
WP_000009237.1\|378410_378557_+	hypothetical protein	NA	NA	NA	NA
WP_160194986.1\|378792_379806_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_000409167.1\|380117_381260_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.3e-33	29.3
WP_000066097.1\|381260_382379_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000567017.1\|382900_383569_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_160194987.1\|383570_386048_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	2.5e-66	28.9
WP_000734079.1\|386390_389021_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.2e-64	34.4
WP_000426912.1\|389083_389344_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_000939059.1\|389347_389776_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_000134779.1\|389790_390099_+	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_000342266.1\|390383_391022_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
WP_160194988.1\|391024_391948_+	U32 family peptidase	NA	NA	NA	NA
WP_077517334.1\|391959_393228_+	U32 family peptidase	Q6DW11	Phage_TP	8.9e-36	31.7
WP_000648617.1\|393227_393851_+	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1

DBSCAN-SWA_22

408701 : 414865

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000439693.1\|408701_409163_+	ComE operon protein 2	A7KUY9	Bacillus_phage	3.6e-35	58.8
WP_077534995.1\|409221_411369_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.2e-32	32.2
WP_001282562.1\|411425_412400_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_001274017.1\|412444_412696_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_000368338.1\|413041_414865_+	elongation factor 4	A0A1S5SF82	Streptococcus_phage	6.1e-22	25.1

DBSCAN-SWA_23

418417 : 421525

Micromonas_pusilla_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000034716.1\|418417_420250_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	4.4e-137	46.5
WP_001119016.1\|420385_421525_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	8.8e-27	26.0

DBSCAN-SWA_24

427995 : 428943

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001117767.1\|427995_428943_+	PhoH family protein	L7TP00	Rhizobium_phage	6.4e-47	46.8

DBSCAN-SWA_25

431949 : 445695

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030080.1\|431949_433341_-\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	4.7e-46	27.4
WP_001794939.1\|433675_434299_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000411301.1\|434309_435128_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_001217246.1\|435188_437006_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	3.6e-54	36.0
WP_160194990.1\|437229_438336_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_000624571.1\|438466_439144_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_160194991.1\|439146_440247_+	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	5.2e-08	29.6
WP_001062177.1\|440360_441707_+	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	2.4e-55	34.0
WP_000924220.1\|441716_442607_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	3.4e-26	36.0
WP_001213908.1\|442732_443518_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-19	28.3
WP_000564316.1\|443559_444423_+	metal ABC transporter permease	NA	NA	NA	NA
WP_160194992.1\|444409_444820_+	transcriptional repressor	NA	NA	NA	NA
WP_000863556.1\|445095_445695_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	9.2e-60	54.7

DBSCAN-SWA_26

451868 : 452492

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223008.1\|451868_452492_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-30	37.1

DBSCAN-SWA_27

458036 : 460848

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019681.1\|458036_459383_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	4.8e-64	39.7
WP_000202188.1\|459375_460848_+	glycine dehydrogenase subunit 2	E3SN07	Prochlorococcus_phage	2.8e-81	41.3

DBSCAN-SWA_28

468347 : 474918

Indivirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001286928.1\|468347_469685_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.6e-43	37.7
WP_000159865.1\|469677_469908_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000183375.1\|469885_470767_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	8.9e-11	26.1
WP_001124985.1\|471198_471651_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000942211.1\|471666_473346_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001291533.1\|473496_474918_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	5.1e-40	26.3

DBSCAN-SWA_29

481748 : 483155

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000193707.1\|481748_483155_+	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	4.3e-31	31.1

DBSCAN-SWA_30

487800 : 489285

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160194994.1\|487800_489285_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	2.4e-80	37.8

DBSCAN-SWA_31

494949 : 504426

Brevibacillus_phage(20.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000447733.1\|494949_495837_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.6e-37	31.1
WP_001183421.1\|495914_496421_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_000273378.1\|496512_497244_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	7.9e-05	21.8
WP_000368656.1\|497236_497779_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_000159577.1\|497771_498509_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000064078.1\|498641_499367_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-45	43.0
WP_000987769.1\|499347_501099_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-21	33.6
WP_001793476.1\|501343_502252_+	DUF1672 domain-containing protein	NA	NA	NA	NA
WP_020978192.1\|502263_504426_+	hypothetical protein	B5WZK7	Staphylococcus_phage	1.4e-105	96.0

DBSCAN-SWA_32

508429 : 511108

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001151997.1\|508429_508678_-	ferredoxin	A0A127AYY7	Bacillus_phage	8.3e-15	48.0
WP_001163809.1\|508785_509739_+	hypothetical protein	NA	NA	NA	NA
WP_000902108.1\|509728_511108_+	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	4.9e-56	33.6

DBSCAN-SWA_33

520532 : 525999

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043863.1\|520532_520805_+	DNA-binding protein HU	A7KV42	Bacillus_phage	4.2e-28	73.3
WP_000450557.1\|521235_521808_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_000774684.1\|521810_522536_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_073392434.1\|522552_523497_+	heptaprenyl diphosphate synthase	A0A1V0SE37	Indivirus	9.6e-11	24.4
WP_000442480.1\|523588_524038_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_000789522.1\|524246_524447_+	hypothetical protein	NA	NA	NA	NA
WP_001269921.1\|524832_525999_+	chorismate synthase	A0A291AU41	Pandoravirus	5.8e-34	31.8

DBSCAN-SWA_34

529661 : 530237

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000005212.1\|529661_530237_+	IDEAL domain-containing protein	G3MAV7	Bacillus_virus	2.1e-08	27.2

DBSCAN-SWA_35

533607 : 541113

unidentified_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000361544.1\|533607_534810_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	3.2e-35	42.5
WP_000049919.1\|534796_535768_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_000525081.1\|535791_538485_+	ATP-dependent helicase DinG	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000858789.1\|538806_540099_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.9e-54	30.0
WP_000362220.1\|540426_541113_+	DnaD domain-containing protein	Q938N2	Temperate_phage	5.5e-08	32.6

DBSCAN-SWA_36

544853 : 545480

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001108889.1\|544853_545480_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5

DBSCAN-SWA_37

554805 : 555684

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001133021.1\|554805_555684_+	5'-3' exonuclease	S5M4P0	Bacillus_phage	1.4e-19	29.5

DBSCAN-SWA_38

594120 : 603510

Staphylococcus_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000282171.1\|594120_594825_-	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	8.4e-12	23.8
WP_001795441.1\|595069_595264_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_000691942.1\|595275_595527_+	hypothetical protein	NA	NA	NA	NA
WP_000404645.1\|595564_596689_+	virulence factor C	NA	NA	NA	NA
WP_000995287.1\|596704_597142_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_000934894.1\|597565_598522_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.6e-167	85.2
WP_000175745.1\|598721_599201_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	2.0e-73	79.2
WP_000166059.1\|599215_600055_+	fatty acid kinase FakB2	A0A0N9SI50	Staphylococcus_phage	2.3e-48	77.3
WP_000159900.1\|600140_600674_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000913319.1\|600666_601095_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_000473654.1\|601106_601607_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_000801007.1\|601606_601828_+	hypothetical protein	NA	NA	NA	NA
WP_000342132.1\|602019_603510_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	2.9e-22	30.5

DBSCAN-SWA_39

606919 : 608931

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000192137.1\|606919_607579_+	response regulator transcription factor ArlR	W8CYM9	Bacillus_phage	1.1e-34	33.8
WP_000166801.1\|607575_608931_+	sensor histidine kinase ArlS	A0A1V0SGX0	Hokovirus	3.5e-14	27.8

DBSCAN-SWA_40

615096 : 615888

Halovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001185421.1\|615096_615888_+	MoxR family ATPase	R4TG24	Halovirus	3.3e-12	34.2

DBSCAN-SWA_41

619428 : 625980

Lactobacillus_phage(33.33%)

transposase,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000138406.1\|619428_620565_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	5.7e-34	28.3
WP_001788788.1\|620596_621226_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_001215907.1\|621244_621514_-	acylphosphatase	NA	NA	NA	NA
WP_000269923.1\|621676_621985_+	DUF1033 family protein	NA	NA	NA	NA
WP_000809131.1\|622155_622356_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	66.2
WP_000876202.1\|622552_622954_+	sarA expression modulator protein Msa	NA	NA	NA	NA
WP_025173837.1\|623318_624638_+\|transposase	ISL3-like element IS1181 family transposase	NA	NA	NA	NA
WP_000216946.1\|624714_625980_-	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	6.2e-13	23.2

DBSCAN-SWA_42

633825 : 635427

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000942306.1\|633825_635427_-	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	9.4e-51	25.7

DBSCAN-SWA_43

639853 : 643307

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000079447.1\|639853_640705_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	8.9e-16	29.7
WP_000974847.1\|640711_641353_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000077571.1\|641492_643307_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.1e-154	47.1

DBSCAN-SWA_44

646721 : 647423

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571258.1\|646721_647423_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.5e-13	30.3

DBSCAN-SWA_45

654939 : 657294

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154119.1\|654939_655722_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-27	35.9
WP_031871481.1\|655723_656722_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	4.2e-33	34.1
WP_000604816.1\|656727_657294_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-23	32.1

DBSCAN-SWA_46

661612 : 662875

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000283016.1\|661612_662875_-	Y-family DNA polymerase	O64031	Bacillus_phage	2.6e-96	44.3

DBSCAN-SWA_47

672534 : 676928

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289569.1\|672534_674937_-	DNA topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	1.8e-93	32.2
WP_025173823.1\|674936_676928_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	1.4e-115	40.5

DBSCAN-SWA_48

682921 : 684568

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001088978.1\|682921_684568_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	2.5e-22	24.4

DBSCAN-SWA_49

688237 : 689359

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000691303.1\|688237_689359_-	exonuclease SbcCD subunit D	A0A1X9I9U0	Staphylococcus_phage	4.3e-10	22.7

DBSCAN-SWA_50

693509 : 699182

Phage_Wrath(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001208755.1\|693509_694133_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	5.9e-17	63.8
WP_000380734.1\|694512_695376_-	CAP domain-containing protein	U5Q0C0	Bacillus_phage	9.1e-16	40.7
WP_001791425.1\|695449_695554_+	hypothetical protein	NA	NA	NA	NA
WP_000688120.1\|695550_696528_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	8.0e-186	99.7
WP_001085655.1\|696684_696954_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_001265708.1\|697424_697574_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000082539.1\|697664_699182_-	catalase	A0A2K9L0T1	Tupanvirus	2.3e-91	43.2

DBSCAN-SWA_51

709324 : 713600

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000841351.1\|709324_709858_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.4e-21	43.5
WP_001027143.1\|709996_710185_+	hypothetical protein	NA	NA	NA	NA
WP_000202390.1\|710297_710900_-	response regulator transcription factor	NA	NA	NA	NA
WP_000670307.1\|710896_711988_-	sensor histidine kinase	NA	NA	NA	NA
WP_000603969.1\|711991_712723_-	ABC transporter permease	NA	NA	NA	NA
WP_000593436.1\|712691_713600_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.1e-22	25.9

DBSCAN-SWA_52

717570 : 718032

Staphylococcus_phage(100.0%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001120914.1\|717570_718032_-\|capsid	phage capsid protein	A0A1J0MF61	Staphylococcus_phage	3.8e-29	46.0

DBSCAN-SWA_53

721216 : 724251

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000006110.1\|721216_721402_-	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.4e-19	78.7
WP_001788716.1\|721829_721940_-	hypothetical protein	NA	NA	NA	NA
WP_001002340.1\|722640_722847_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	1.3e-13	59.7
WP_001789892.1\|723139_723364_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	4.3e-18	71.0
WP_001792627.1\|724053_724251_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	1.4e-09	46.9

DBSCAN-SWA_54

729331 : 729808

Fowlpox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000448078.1\|729331_729808_+	glutathione peroxidase	Q70H87	Fowlpox_virus	1.2e-22	38.0

DBSCAN-SWA_55

735750 : 742224

Acanthocystis_turfacea_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001103743.1\|735750_736569_-	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	2.4e-26	35.1
WP_001792629.1\|737035_737578_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_000516267.1\|737583_739593_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	2.4e-59	29.1
WP_000073344.1\|739605_742224_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.9e-40	23.6

DBSCAN-SWA_56

751637 : 752681

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000368166.1\|751637_752681_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	9.3e-124	69.2

DBSCAN-SWA_57

756882 : 762426

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000664781.1\|756882_758169_-	insulinase family protein	G3MBJ8	Bacillus_virus	7.9e-16	28.4
WP_000089942.1\|758168_759434_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	9.1e-41	26.8
WP_001293307.1\|759464_760178_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001806691.1\|760182_762426_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.9e-84	47.7

DBSCAN-SWA_58

767568 : 779382

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000864185.1\|767568_768540_-	riboflavin biosynthesis protein RibF	A0A1V0SJE1	Klosneuvirus	1.7e-07	32.1
WP_000282302.1\|768554_769472_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000097322.1\|769641_769992_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000043635.1\|770377_772495_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	2.4e-25	25.1
WP_000020853.1\|772499_772817_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000727423.1\|772813_773098_-	YlxR family protein	NA	NA	NA	NA
WP_000097460.1\|773118_774294_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_160195004.1\|774314_774782_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_077535022.1\|775071_779382_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	3.5e-23	41.2

DBSCAN-SWA_59

783655 : 784426

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000473699.1\|783655_784426_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	7.3e-25	41.5

DBSCAN-SWA_60

789200 : 802871

Erwinia_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000379054.1\|789200_790604_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	4.9e-27	25.6
WP_000072681.1\|790669_791215_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001015597.1\|791211_792108_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	3.6e-31	31.5
WP_000195258.1\|792524_793832_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_001557331.1\|793987_796063_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-105	39.2
WP_160195006.1\|796236_797109_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_000672869.1\|797281_798526_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA
WP_001041669.1\|798553_799672_-	LysM peptidoglycan-binding domain-containing protein	A0A1W6JQB6	Staphylococcus_phage	1.6e-49	60.4
WP_000110251.1\|799898_800807_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.0e-17	33.2
WP_001020801.1\|800828_801995_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_000176386.1\|802103_802871_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	1.9e-25	44.1

DBSCAN-SWA_61

816251 : 818337

Acanthamoeba_polyphaga_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000043237.1\|816251_816983_-	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8
WP_000426914.1\|817098_817332_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000167269.1\|817602_818337_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3

DBSCAN-SWA_62

828774 : 830769

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000579571.1\|828774_830769_-	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8

DBSCAN-SWA_63

833916 : 834852

Prochlorococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161293.1\|833916_834852_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	4.7e-10	28.0

DBSCAN-SWA_64

839861 : 842118

Methanothermobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000722165.1\|839861_841061_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.2e-42	32.9
WP_000933956.1\|841276_841495_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000368226.1\|841494_842118_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	1.0e-21	34.1

DBSCAN-SWA_65

845432 : 846044

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001040248.1\|845432_846044_-	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	1.6e-27	33.8

DBSCAN-SWA_66

850011 : 854622

Halovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001190913.1\|850011_851112_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.6e-63	36.7
WP_000767030.1\|851113_852388_-	dihydroorotase	NA	NA	NA	NA
WP_001016166.1\|852405_853287_-	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.6e-31	33.9
WP_001178619.1\|853314_854622_-	uracil permease	Q9KX94	Enterobacteria_phage	3.3e-54	34.0

DBSCAN-SWA_67

859086 : 861840

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000384691.1\|859086_861840_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	3.6e-90	28.0

DBSCAN-SWA_68

883400 : 883589

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001245802.1\|883400_883589_-	hypothetical protein	A0A0K1LL29	Staphylococcus_phage	3.8e-20	86.9

DBSCAN-SWA_69

892559 : 894519

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001802045.1\|892559_892784_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	5.6e-18	71.4
WP_000765708.1\|892740_892887_-	hypothetical protein	NA	NA	NA	NA
WP_000857488.1\|893559_894519_+	beta-channel forming cytolysin	A0A2H4PQH7	Staphylococcus_phage	7.4e-35	30.3

DBSCAN-SWA_70

908403 : 912961

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001018928.1\|908403_908718_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.6e-25	46.6
WP_001249293.1\|908890_911239_-	endonuclease MutS2	F2QAF8	Phaeocystis_pouchetii_virus	3.2e-15	25.1
WP_000161940.1\|911248_912961_-	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	8.9e-15	24.0

DBSCAN-SWA_71

917966 : 919025

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003566.1\|917966_919025_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5

DBSCAN-SWA_72

930968 : 933876

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000401377.1\|930968_931451_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2
WP_001263796.1\|931452_931995_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_000814565.1\|932064_932454_+	hypothetical protein	NA	NA	NA	NA
WP_001049150.1\|932456_932711_-	YlbG family protein	NA	NA	NA	NA
WP_160195010.1\|932949_933876_+	glycerophosphodiester phosphodiesterase	M1I1K8	Paramecium_bursaria_Chlorella_virus	1.9e-11	25.8

DBSCAN-SWA_73

945393 : 947241

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000182654.1\|945393_947241_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	1.8e-21	26.2

DBSCAN-SWA_74

955376 : 964209

Mycoplasma_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000433551.1\|955376_956471_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-37	44.3
WP_001020625.1\|956483_957023_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000455597.1\|957166_957442_-	UPF0223 family protein	NA	NA	NA	NA
WP_000260117.1\|957609_959016_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-46	29.1
WP_160195011.1\|959019_960312_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_000068176.1\|960402_961380_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_000035320.1\|961383_962496_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	A0A0K0KW14	Prochlorococcus_phage	1.4e-05	27.8
WP_000668339.1\|962666_963293_-	cell-wall-binding lipoprotein	NA	NA	NA	NA
WP_000957036.1\|963657_964209_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-13	42.2

DBSCAN-SWA_75

970221 : 974601

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289614.1\|970221_970455_+	glutaredoxin family protein	G3MBF0	Bacillus_virus	8.4e-09	38.7
WP_000040052.1\|970691_972410_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_000437472.1\|972412_972679_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_000505966.1\|972832_973375_-	hypothetical protein	NA	NA	NA	NA
WP_000685063.1\|973428_974601_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	4.0e-75	42.8

DBSCAN-SWA_76

977717 : 992477

Prochlorococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000921973.1\|977717_979118_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-10	26.3
WP_000273245.1\|979110_979917_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_001101901.1\|980181_981429_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_000709284.1\|981450_982929_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.9e-77	52.1
WP_000238670.1\|982943_983510_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.6e-29	40.1
WP_000030811.1\|983512_984541_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.4e-62	41.7
WP_000483714.1\|984533_986018_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
WP_000032727.1\|985996_988186_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.0e-140	39.7
WP_000666794.1\|988178_988850_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_000848350.1\|988851_989115_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000174053.1\|989114_989819_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
WP_001010412.1\|989822_990947_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000861572.1\|990933_991416_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
WP_000225837.1\|991616_992477_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.3e-40	39.2

DBSCAN-SWA_77

1002792 : 1006563

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001074559.1\|1002792_1006563_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	A0A1J0MFB0	Staphylococcus_phage	1.1e-54	37.6

DBSCAN-SWA_78

1010229 : 1011222

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064127871.1\|1010229_1011222_+	Glu-specific serine endopeptidase SspA	A0A2H4PQP7	Staphylococcus_phage	6.1e-16	32.3

DBSCAN-SWA_79

1019528 : 1023249

Enterococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001788574.1\|1019528_1019819_+	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0
WP_020978112.1\|1019882_1020014_+	hypothetical protein	NA	NA	NA	NA
WP_160195013.1\|1020059_1021019_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000766009.1\|1021506_1021863_+	DoxX family protein	NA	NA	NA	NA
WP_001792676.1\|1021951_1022089_-	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA
WP_001795544.1\|1022229_1022520_+	hypothetical protein	NA	NA	NA	NA
WP_000571178.1\|1022607_1023249_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-19	33.7

DBSCAN-SWA_80

1033444 : 1038655

Pithovirus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455278.1\|1033444_1035769_-\|protease	serine protease	W5SAB9	Pithovirus	2.8e-11	27.4
WP_000928413.1\|1035987_1036791_-	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_001049951.1\|1037092_1038655_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	1.7e-36	28.2

DBSCAN-SWA_81

1060091 : 1061900

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082725.1\|1060091_1061900_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.5e-47	24.5

DBSCAN-SWA_82

1067713 : 1069683

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427767.1\|1067713_1068694_-	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.3e-15	33.5
WP_001067052.1\|1068696_1069683_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.4e-15	29.6

DBSCAN-SWA_83

1073334 : 1075348

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000786734.1\|1073334_1074276_-	ATP-binding cassette domain-containing protein	F2Y1V6	Organic_Lake_phycodnavirus	1.6e-05	26.9
WP_000140050.1\|1074265_1075348_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-19	28.8

DBSCAN-SWA_84

1086123 : 1090751

Agrobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195014.1\|1086123_1088733_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	1.2e-116	34.2
WP_001044224.1\|1088936_1090751_-	acetyltransferase	B5WZU0	Pseudomonas_phage	6.7e-37	33.9

DBSCAN-SWA_85

1097546 : 1101200

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154922.1\|1097546_1101200_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	2.9e-23	24.2

DBSCAN-SWA_86

1111353 : 1118459

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185319.1\|1111353_1112283_+	glycerophosphodiester phosphodiesterase	A0A220BYK6	Staphylococcus_phage	3.7e-39	37.9
WP_000138487.1\|1112733_1113978_-	NAD-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000167307.1\|1114086_1115277_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.3e-33	29.8
WP_160195016.1\|1115584_1116712_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_001067294.1\|1117073_1117451_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000035058.1\|1117865_1118459_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.1e-25	41.3

DBSCAN-SWA_87

1128379 : 1132006

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001009707.1\|1128379_1129855_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	4.5e-47	34.9
WP_000046076.1\|1129985_1131194_-	NADH dehydrogenase	NA	NA	NA	NA
WP_001143499.1\|1131646_1132006_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	3.5e-14	38.6

DBSCAN-SWA_88

1136049 : 1138718

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000613541.1\|1136049_1137264_-	PG:teichoic acid D-alanyltransferase DltB	A0A125RNP0	Pseudomonas_phage	8.5e-20	26.1
WP_000129651.1\|1137260_1138718_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	1.5e-39	28.5

DBSCAN-SWA_89

1151930 : 1155453

environmental_halophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000807670.1\|1151930_1153172_-	cysteine desulfurase	Q2XUY6	environmental_halophage	8.2e-111	44.8
WP_000205572.1\|1153286_1154594_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000168845.1\|1154691_1155453_-	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	4.4e-06	23.3

DBSCAN-SWA_90

1158939 : 1159965

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571213.1\|1158939_1159965_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.4e-28	36.8

DBSCAN-SWA_91

1163127 : 1168304

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000589549.1\|1163127_1163484_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.7e-19	46.6
WP_001190695.1\|1163627_1163948_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	3.1e-06	36.4
WP_000422913.1\|1164097_1164637_-	nitroreductase	NA	NA	NA	NA
WP_000150012.1\|1164719_1165436_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	1.5e-16	30.1
WP_000974460.1\|1165583_1166006_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000569884.1\|1166404_1166899_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000255561.1\|1167053_1167671_+	amino acid transporter	NA	NA	NA	NA
WP_001802951.1\|1167743_1168304_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	3.8e-31	40.4

DBSCAN-SWA_92

1171708 : 1172952

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001059082.1\|1171708_1171909_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.4e-20	70.8
WP_001792695.1\|1172265_1172952_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.8e-33	54.2

DBSCAN-SWA_93

1182162 : 1189906

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000757407.1\|1182162_1182891_+	DUF5067 domain-containing protein	H9A0X8	Staphylococcus_phage	1.3e-18	37.5
WP_001085185.1\|1183755_1184220_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.5e-81	100.0
WP_001050059.1\|1184241_1186614_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.7e-93	39.0
WP_001165956.1\|1186647_1187388_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_000556760.1\|1187503_1187737_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_000785252.1\|1187803_1188262_-	hypothetical protein	NA	NA	NA	NA
WP_001121759.1\|1188601_1189906_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	7.4e-195	80.5

DBSCAN-SWA_94

1198962 : 1204890

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001049165.1\|1198962_1199550_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.2e-53	55.3
WP_000006551.1\|1200113_1201058_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.1e-54	40.6
WP_001248939.1\|1201168_1202164_-	YvcK family protein	A1IMD5	Streptococcus_phage	4.8e-53	41.9
WP_000369722.1\|1202160_1203072_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	36.1
WP_000134961.1\|1203954_1204890_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	8.4e-84	49.5

DBSCAN-SWA_95

1209279 : 1212126

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000662681.1\|1209279_1212126_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.1

DBSCAN-SWA_96

1215444 : 1216284

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000753321.1\|1215444_1216284_-	CHAP domain-containing protein	A0A2H4J675	uncultured_Caudovirales_phage	3.5e-12	42.2

DBSCAN-SWA_97

1222362 : 1228068

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001548033.1\|1222362_1223445_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	1.3e-43	35.2
WP_000686343.1\|1223808_1224675_-	DegV family protein	NA	NA	NA	NA
WP_000192949.1\|1224818_1225460_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	5.3e-37	47.7
WP_000258150.1\|1225624_1226680_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_000460983.1\|1226997_1228068_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-16	33.5

DBSCAN-SWA_98

1237343 : 1260516

uncultured_Caudovirales_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000616840.1\|1237343_1238105_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	6.5e-18	31.6
WP_001245577.1\|1238101_1239058_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
WP_000876318.1\|1239044_1240016_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.3e-139	78.9
WP_000499195.1\|1240054_1240210_-	hypothetical protein	NA	NA	NA	NA
WP_000562498.1\|1240390_1241362_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
WP_000855505.1\|1241479_1243585_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000692521.1\|1243547_1243946_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_001068487.1\|1244746_1245613_+	DMT family transporter	NA	NA	NA	NA
WP_000930012.1\|1245632_1246133_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
WP_000193751.1\|1246473_1247979_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_031760357.1\|1248056_1248158_-	hypothetical protein	NA	NA	NA	NA
WP_000429008.1\|1248247_1249165_+	lipid kinase	A0A1V0SBJ0	Catovirus	2.8e-07	22.4
WP_000197271.1\|1249788_1250331_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000663030.1\|1250625_1251684_-	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	7.9e-22	26.7
WP_000180991.1\|1251923_1253438_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_000589259.1\|1253430_1254408_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-25	33.3
WP_000983677.1\|1254629_1256411_-	DNA helicase RecQ	A0A2P1EM61	Moumouvirus	6.5e-77	37.0
WP_160195019.1\|1256422_1258306_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.5e-55	30.8
WP_000098285.1\|1258575_1260516_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	1.3e-110	39.5

DBSCAN-SWA_99

1263655 : 1273501

Pandoravirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001217801.1\|1263655_1264807_-	anthranilate synthase component I family protein	S4VNU7	Pandoravirus	7.8e-23	35.7
WP_000604514.1\|1264790_1265384_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_000446724.1\|1265734_1266403_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	9.6e-66	57.5
WP_000941340.1\|1266404_1266824_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_001062972.1\|1266827_1267541_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000637687.1\|1267639_1268224_+	hypothetical protein	NA	NA	NA	NA
WP_001093557.1\|1268503_1268944_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001037807.1\|1269285_1269759_+	DoxX family protein	NA	NA	NA	NA
WP_000149344.1\|1269733_1270420_+	response regulator transcription factor	NA	NA	NA	NA
WP_000244415.1\|1270419_1271475_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	3.6e-14	29.8
WP_000702781.1\|1271546_1272530_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	1.5e-62	43.3
WP_000931239.1\|1272661_1273501_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.5e-55	41.9

DBSCAN-SWA_100

1285113 : 1286487

Powai_lake_megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000952035.1\|1285113_1286487_-	deoxyribodipyrimidine photo-lyase	A0A167RC11	Powai_lake_megavirus	3.0e-45	33.8

DBSCAN-SWA_101

1291464 : 1297744

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000857599.1\|1291464_1293138_-	amino acid ABC transporter ATP-binding/permease protein	W8CYL7	Bacillus_phage	3.4e-11	22.9
WP_020978073.1\|1293134_1294766_-	ABC transporter ATP-binding protein/permease	W5SAS9	Pithovirus	6.7e-12	27.8
WP_000469894.1\|1294984_1295860_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000358498.1\|1296031_1296715_+	hypothetical protein	NA	NA	NA	NA
WP_000148817.1\|1296717_1297176_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_000820892.1\|1297177_1297744_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.1e-21	36.9

DBSCAN-SWA_102

1304747 : 1305221

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833483.1\|1304747_1305221_-	cupin	A0A291AU44	Pandoravirus	2.1e-14	39.4

DBSCAN-SWA_103

1310483 : 1311281

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000731647.1\|1310483_1311281_+	LysM peptidoglycan-binding domain-containing protein	A0A223LD43	Bacillus_phage	4.2e-07	30.9

DBSCAN-SWA_104

1316111 : 1316873

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000985996.1\|1316111_1316873_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-33	34.8

DBSCAN-SWA_105

1321247 : 1322291

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030771.1\|1321247_1322291_-	alpha/beta hydrolase	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	2.0e-17	26.6

DBSCAN-SWA_106

1328814 : 1329612

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001080809.1\|1328814_1329612_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	30.7

DBSCAN-SWA_107

1332837 : 1336796

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000817956.1\|1332837_1334565_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-110	43.3
WP_000793045.1\|1334985_1336281_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-14	26.9
WP_000832260.1\|1336397_1336796_-	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	3.2e-16	39.9

DBSCAN-SWA_108

1343730 : 1344474

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894464.1\|1343730_1344474_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.2e-11	29.7

DBSCAN-SWA_109

1355359 : 1355920

Streptococcus_phage(100.0%)

integrase

attL 1345099:1345112|attR 1358425:1358438

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1345099:1345112	attL	NA	NA	NA	NA
WP_001044915.1\|1355359_1355920_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
WP_001044915.1\|1355359_1355920_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
1358425:1358438	attR	NA	NA	NA	NA

DBSCAN-SWA_110

1368987 : 1372341

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001200748.1\|1368987_1369998_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	5.6e-33	27.3
WP_001792725.1\|1370496_1371018_-	hypothetical protein	NA	NA	NA	NA
WP_000180238.1\|1371045_1372341_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.6e-24	27.9

DBSCAN-SWA_111

1379913 : 1381236

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000860575.1\|1379913_1381236_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	5.3e-108	47.1

DBSCAN-SWA_112

1394062 : 1394719

Elephant_endotheliotropic_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455256.1\|1394062_1394719_-	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	1.1e-45	46.4

DBSCAN-SWA_113

1398303 : 1401624

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195024.1\|1398303_1399680_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.0e-21	24.7
WP_000347061.1\|1400223_1401624_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.4e-55	32.8

DBSCAN-SWA_114

1424852 : 1425515

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067262.1\|1424852_1425515_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.4e-24	37.4

DBSCAN-SWA_115

1432098 : 1433286

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000250823.1\|1432098_1433286_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	4.4e-45	30.6

DBSCAN-SWA_116

1436314 : 1447268

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000090315.1\|1436314_1438396_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.7e-66	28.3
WP_001137495.1\|1438518_1438989_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_001142337.1\|1439054_1439468_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_000031892.1\|1439565_1439820_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_001788197.1\|1439956_1443553_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	3.3e-67	24.6
WP_000918667.1\|1443716_1447268_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.1e-50	24.3

DBSCAN-SWA_117

1450951 : 1455734

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288302.1\|1450951_1451500_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	8.6e-12	33.5
WP_001074473.1\|1451512_1451695_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001788193.1\|1451750_1451894_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000872873.1\|1452008_1452578_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_000664738.1\|1452658_1453183_-	NYN domain-containing protein	NA	NA	NA	NA
WP_000390332.1\|1453182_1453929_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000370182.1\|1453936_1454341_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_000631974.1\|1454333_1455734_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.5e-55	32.2

DBSCAN-SWA_118

1461744 : 1464201

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195026.1\|1461744_1464201_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A1C3S747	Escherichia_phage	6.1e-134	41.2

DBSCAN-SWA_119

1483142 : 1493413

Catovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288202.1\|1483142_1484630_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.1e-92	41.1
WP_001790128.1\|1484682_1484775_-	hypothetical protein	NA	NA	NA	NA
WP_000613716.1\|1485168_1485645_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_001154302.1\|1485641_1486007_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000167923.1\|1485984_1486788_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	3.9e-21	29.3
WP_000057594.1\|1487003_1487936_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.7e-108	65.7
WP_000148605.1\|1488114_1488996_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_001167888.1\|1489223_1491317_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQ50	Micromonas_sp._RCC1109_virus	4.0e-110	42.7
WP_000551283.1\|1491573_1492113_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.5e-12	29.8
WP_001176703.1\|1492117_1493413_-\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SI91	Klosneuvirus	8.2e-13	24.5

DBSCAN-SWA_120

1502669 : 1505134

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000933774.1\|1502669_1503635_-	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	6.1e-45	35.4
WP_001252529.1\|1503781_1505134_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	8.3e-24	30.4

DBSCAN-SWA_121

1511018 : 1514116

Klosneuvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001051129.1\|1511018_1512992_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.5e-93	36.2
WP_000279926.1\|1513276_1514116_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-57	45.8

DBSCAN-SWA_122

1518022 : 1518640

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272126.1\|1518022_1518640_-	dTMP kinase	M1PSC7	Streptococcus_phage	9.2e-47	48.3

DBSCAN-SWA_123

1527733 : 1529431

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001109040.1\|1527733_1529431_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.9e-54	42.3

DBSCAN-SWA_124

1547599 : 1553840

Lactobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001170264.1\|1547599_1548604_-	autolysin/adhesin Aaa	A0A0A7NU10	Lactobacillus_phage	1.6e-24	41.2
WP_160195029.1\|1548935_1549778_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_000468001.1\|1549814_1550474_-	ABC transporter permease	NA	NA	NA	NA
WP_000569263.1\|1550477_1551503_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-31	37.3
WP_001036661.1\|1551799_1552942_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA
WP_000634100.1\|1552925_1553840_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	2.3e-49	39.9

DBSCAN-SWA_125

1578241 : 1580960

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000072573.1\|1578241_1579411_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	4.6e-79	46.4
WP_000028683.1\|1579403_1580960_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.5e-287	97.7

DBSCAN-SWA_126

1594473 : 1597493

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025173828.1\|1594473_1594806_-	hypothetical protein	A0A0N9SJ02	Staphylococcus_phage	6.3e-10	53.2
WP_001255835.1\|1595306_1596152_-	aminoglycoside 6-adenylyltransferase	A0A1X9I6F2	Streptococcus_phage	5.3e-53	40.4
WP_000800379.1\|1596740_1597493_+	S8 family serine peptidase	A0A1W6JND5	Lactococcus_phage	9.6e-14	32.2

DBSCAN-SWA_127

1602582 : 1605615

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000424963.1\|1602582_1604124_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	32.6
WP_000264071.1\|1604148_1605615_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5

DBSCAN-SWA_128

1614575 : 1616099

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000930514.1\|1614575_1616099_+	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	1.4e-40	33.6

DBSCAN-SWA_129

1625757 : 1632091

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000934799.1\|1625757_1626261_-	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_001261460.1\|1626281_1626578_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_001052483.1\|1626821_1627013_+	hypothetical protein	U3PCX8	Staphylococcus_phage	4.9e-23	80.0
WP_001218732.1\|1627098_1628196_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_000157345.1\|1628207_1628411_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_001077602.1\|1628440_1629322_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_001566903.1\|1629478_1630324_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	1.6e-12	34.4
WP_000655707.1\|1630987_1632091_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	4.6e-12	29.0

DBSCAN-SWA_130

1642025 : 1642868

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000209565.1\|1642025_1642868_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-12	27.2

DBSCAN-SWA_131

1664138 : 1666873

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000280802.1\|1664138_1665161_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	1.1e-09	29.7
WP_001191956.1\|1665138_1666083_-	NAD-dependent deacetylase	NA	NA	NA	NA
WP_000449063.1\|1666072_1666873_-	protein-ADP-ribose hydrolase	A0A2K9L8X2	Tupanvirus	5.2e-42	43.9

DBSCAN-SWA_132

1685107 : 1685785

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000911017.1\|1685107_1685785_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-31	38.9

DBSCAN-SWA_133

1707701 : 1712141

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000549264.1\|1707701_1712141_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	8.2e-28	24.3

DBSCAN-SWA_134

1721580 : 1728158

Staphylococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001667277.1\|1721580_1722072_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	4.3e-31	45.9
WP_000163139.1\|1722037_1722544_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000166624.1\|1722655_1723018_-	cystatin-like fold lipoprotein	NA	NA	NA	NA
WP_000768323.1\|1723066_1723660_-	hypothetical protein	NA	NA	NA	NA
WP_000247512.1\|1723666_1724704_-	CHAP domain-containing protein	A0A1X9SGZ2	Bradyrhizobium_phage	1.2e-06	30.5
WP_000824164.1\|1724693_1726607_-	membrane protein	NA	NA	NA	NA
WP_000178429.1\|1726802_1728158_-	cell division protein FtsK	A0A1S5SFB5	Streptococcus_phage	2.2e-45	29.8

DBSCAN-SWA_135

1740111 : 1741773

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570065.1\|1740111_1740771_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.5e-23	32.5
WP_000736795.1\|1740822_1741773_-	glycine-glycine endopeptidase LytM	V5R8R0	Arthrobacter_phage	1.5e-16	42.7

DBSCAN-SWA_136

1751011 : 1752448

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000164005.1\|1751011_1752448_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	1.1e-29	25.7

DBSCAN-SWA_137

1756208 : 1760746

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000925394.1\|1756208_1757948_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.5e-62	31.5
WP_000608831.1\|1758206_1758881_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA
WP_000975365.1\|1759024_1760746_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.1e-11	37.4

DBSCAN-SWA_138

1770696 : 1771740

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000645601.1\|1770696_1771740_-	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	2.7e-14	24.7

DBSCAN-SWA_139

1778954 : 1780484

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000838204.1\|1778954_1780484_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	5.3e-11	52.0

DBSCAN-SWA_140

1789359 : 1790865

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001008396.1\|1789359_1790865_+	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	7.8e-39	25.9

DBSCAN-SWA_141

1801988 : 1807347

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195037.1\|1801988_1804238_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.7e-186	45.1
WP_000837103.1\|1804825_1805794_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000127985.1\|1805790_1807347_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.8e-13	27.2

DBSCAN-SWA_142

1817557 : 1819618

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000818914.1\|1817557_1818655_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.4e-24	35.6
WP_000166906.1\|1819039_1819618_-	M23 family metallopeptidase	A0A2K9VGT1	Pontimonas_phage	9.7e-14	39.4

DBSCAN-SWA_143

1828152 : 1829745

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000067358.1\|1828152_1829745_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-21	33.2

DBSCAN-SWA_144

1847893 : 1849078

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001084431.1\|1847893_1849078_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	7.0e-35	29.2

DBSCAN-SWA_145

1853912 : 1864196

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025173831.1\|1853912_1861088_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.5e-68	29.7
WP_000826865.1\|1861534_1862785_-	MFS transporter	NA	NA	NA	NA
WP_000706137.1\|1863170_1864196_-	NAD-dependent formate dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-29	33.9

DBSCAN-SWA_146

1867732 : 1870904

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000590859.1\|1867732_1868473_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-38	40.6
WP_000171919.1\|1868814_1869327_-	DUF4242 domain-containing protein	NA	NA	NA	NA
WP_000356963.1\|1869505_1869709_+	hypothetical protein	NA	NA	NA	NA
WP_001013481.1\|1869944_1870904_-	cation transporter	A0A1V0SED0	Indivirus	1.2e-11	34.2

DBSCAN-SWA_147

1874245 : 1876730

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723451.1\|1874245_1875391_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	3.2e-24	26.1
WP_000779515.1\|1875467_1876730_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	1.1e-22	25.8

DBSCAN-SWA_148

1883565 : 1890130

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413169.1\|1883565_1884690_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	8.7e-128	59.6
WP_001028293.1\|1884693_1885803_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_000459062.1\|1885815_1886844_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	1.1e-41	35.3
WP_160195038.1\|1886833_1888657_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	2.3e-29	29.7
WP_000565293.1\|1888676_1889441_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_000037332.1\|1889443_1890130_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	3.7e-28	36.1

DBSCAN-SWA_149

1901449 : 1902223

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078092.1\|1901449_1902223_+	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-13	26.1

DBSCAN-SWA_150

1910257 : 1910857

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000874681.1\|1910257_1910857_-	Superoxide dismutase [Mn/Fe] 2	Q56AR7	Bacillus_thuringiensis_phage	7.6e-54	50.2

DBSCAN-SWA_151

1915794 : 1916775

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001789408.1\|1915794_1916775_-	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	1.0e-47	37.0

DBSCAN-SWA_152

1920144 : 1921347

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223704.1\|1920144_1921347_-	staphyloferrin B biosynthesis decarboxylase SbnH	A0A2K9L4I2	Tupanvirus	1.1e-08	20.8

DBSCAN-SWA_153

1929613 : 1933823

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570808.1\|1929613_1930594_-	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	2.1e-40	35.6
WP_001045111.1\|1930824_1931817_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA
WP_000924997.1\|1931832_1932828_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA
WP_000136636.1\|1932824_1933823_+	staphyloferrin B ABC transporter permease subunit SirC	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-14	27.5

DBSCAN-SWA_154

1969405 : 1979416

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088649.1\|1969405_1970206_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	1.0e-37	35.9
WP_001104168.1\|1970594_1971383_-	hypothetical protein	NA	NA	NA	NA
WP_001060140.1\|1971383_1972718_-	hypothetical protein	NA	NA	NA	NA
WP_000871607.1\|1972710_1974537_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
WP_000101976.1\|1974549_1975251_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-42	39.2
WP_000095328.1\|1976453_1977737_-	adenylosuccinate synthase	L7Y4J5	Megavirus	1.8e-68	34.6
WP_160195042.1\|1978015_1979416_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	2.7e-110	47.9

DBSCAN-SWA_155

1986106 : 1995151

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000884334.1\|1986106_1987393_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.7e-88	51.2
WP_000177477.1\|1987770_1989285_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	2.6e-90	38.2
WP_000449218.1\|1989610_1990423_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_000819083.1\|1990510_1993180_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.7e-119	35.9
WP_000255586.1\|1993216_1995151_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	5.7e-143	44.9

DBSCAN-SWA_156

2005239 : 2011799

Faecalibacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000742837.1\|2005239_2006079_+	nucleoid occlusion protein	A0A2K9V477	Faecalibacterium_phage	2.2e-06	23.8
WP_000491382.1\|2006530_2006884_+	DUF3147 family protein	NA	NA	NA	NA
WP_000779136.1\|2006951_2007347_+	DUF3147 family protein	NA	NA	NA	NA
WP_001054120.1\|2007606_2008176_+	helix-turn-helix transcriptional regulator	D2XQ11	Bacillus_virus	6.2e-05	33.3
WP_001059079.1\|2008293_2008494_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-19	69.8
WP_000672039.1\|2008886_2009078_-	peptide resistance ABC transporter activity modulator VraH	NA	NA	NA	NA
WP_000143651.1\|2009170_2011051_-	peptide resistance ABC transporter permease subunit VraE	NA	NA	NA	NA
WP_160195043.1\|2011040_2011799_-	peptide resistance ABC transporter ATP-binding subunit VraD	G9BWD6	Planktothrix_phage	9.0e-36	39.5

DBSCAN-SWA_157

2025105 : 2026818

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000138649.1\|2025105_2026818_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.5e-19	31.8

DBSCAN-SWA_158

2032446 : 2033460

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000639186.1\|2032446_2033460_+	histidinol-phosphate aminotransferase family protein	A0A1X7QHI1	Faustovirus	9.6e-09	25.9

DBSCAN-SWA_159

2045708 : 2046401

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185863.1\|2045708_2046401_+	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	2.2e-28	38.0

DBSCAN-SWA_160

2071794 : 2073654

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001125606.1\|2071794_2073654_-	amidase domain-containing protein	A0A249Y0X5	Enterococcus_phage	9.7e-15	37.3

DBSCAN-SWA_161

2099329 : 2101081

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000143420.1\|2099329_2100217_+	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	3.3e-05	22.5
WP_000923760.1\|2100325_2101081_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-31	37.9

DBSCAN-SWA_162

2104501 : 2104999

Canarypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001065269.1\|2104501_2104999_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	2.4e-21	33.1

DBSCAN-SWA_163

2110051 : 2112435

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001071717.1\|2110051_2111902_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.2e-235	64.3
WP_000173329.1\|2111898_2112435_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.3e-41	48.6

DBSCAN-SWA_164

2117312 : 2127425

Klosneuvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000066521.1\|2117312_2119022_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	3.8e-58	32.3
WP_000011688.1\|2119299_2119512_+	hypothetical protein	NA	NA	NA	NA
WP_000708241.1\|2119791_2120235_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_001172351.1\|2120428_2122027_+	AMP-binding protein	A0A2H4PQU7	Staphylococcus_phage	4.1e-78	36.8
WP_001791775.1\|2122086_2122416_-	hypothetical protein	NA	NA	NA	NA
WP_001130051.1\|2122711_2124208_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_001031413.1\|2124400_2125291_-	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	1.0e-06	28.6
WP_001237629.1\|2125413_2125830_-	hypothetical protein	NA	NA	NA	NA
WP_000030073.1\|2126087_2127425_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	4.7e-19	26.7

DBSCAN-SWA_165

2156674 : 2160591

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000751267.1\|2156674_2157376_+	lytic transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	4.0e-38	46.4
WP_000379830.1\|2158779_2160591_+	acetyltransferase	A0A1R3Y5Q6	Salmonella_virus	9.7e-36	31.3

DBSCAN-SWA_166

2169024 : 2173007

Acanthocystis_turfacea_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161366.1\|2169024_2170023_+	D-lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.6e-35	30.2
WP_000076661.1\|2170112_2170319_-	copper chaperone CopZ	NA	NA	NA	NA
WP_160195048.1\|2170598_2173007_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	1.3e-128	40.8

DBSCAN-SWA_167

2182248 : 2185278

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094969835.1\|2182248_2184348_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.5e-117	38.4
WP_160195049.1\|2184756_2185278_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.6e-26	41.1

DBSCAN-SWA_168

2191707 : 2198077

Yellowstone_lake_phycodnavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001062652.1\|2191707_2193447_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.3e-34	24.1
WP_000473680.1\|2193747_2195814_+	PTS glucoside EIICBA component	A0A2I7SAJ6	Vibrio_phage	8.3e-07	43.3
WP_000206033.1\|2196179_2196590_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000240662.1\|2196631_2196976_+	thioredoxin family protein	NA	NA	NA	NA
WP_001228169.1\|2197108_2198077_+	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	5.2e-12	26.5

DBSCAN-SWA_169

2207660 : 2208653

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161533.1\|2207660_2208653_-	D-lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.4e-36	32.3

DBSCAN-SWA_170

2217933 : 2218629

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000382903.1\|2217933_2218629_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	8.8e-38	37.6

DBSCAN-SWA_171

2237766 : 2238633

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000721337.1\|2237766_2238633_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	3.4e-79	52.9

DBSCAN-SWA_172

2247588 : 2252784

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001792493.1\|2247588_2249397_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.6e-94	37.5
WP_000755946.1\|2249528_2249921_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_000088736.1\|2249922_2252784_+	DUF3427 domain-containing protein	Q5YA94	Bacillus_phage	2.4e-28	27.9

DBSCAN-SWA_173

2261534 : 2262230

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000217459.1\|2261534_2262230_+	SDR family oxidoreductase	W8CYX9	Bacillus_phage	8.6e-09	36.5

DBSCAN-SWA_174

2266783 : 2267602

Acanthamoeba_polyphaga_moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824933.1\|2266783_2267602_+	SDR family oxidoreductase	L7RG25	Acanthamoeba_polyphaga_moumouvirus	5.8e-12	28.0

DBSCAN-SWA_175

2275596 : 2277154

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000173865.1\|2275596_2276412_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-13	30.3
WP_000590512.1\|2276404_2277154_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.1e-20	30.8

DBSCAN-SWA_176

2284483 : 2288912

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000923524.1\|2284483_2285146_+	ATP-binding cassette domain-containing protein	F2Y2R6	Organic_Lake_phycodnavirus	5.5e-21	31.3
WP_000072147.1\|2285138_2285915_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_000026187.1\|2286310_2287498_+	MFS transporter	NA	NA	NA	NA
WP_000700920.1\|2287559_2288912_-	carboxylesterase/lipase family protein	A0A0B5J865	Pandoravirus	2.5e-12	34.2

DBSCAN-SWA_177

2292304 : 2294163

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948976.1\|2292304_2293531_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-20	50.5
WP_000569110.1\|2293527_2294163_+	ABC transporter permease	G3M9Y4	Bacillus_virus	9.0e-05	25.7

DBSCAN-SWA_178

2311880 : 2318077

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001176863.1\|2311880_2313023_-	glycerate kinase	W6LM47	Streptococcus_phage	5.3e-56	44.3
WP_000779358.1\|2313280_2313667_+	GtrA family protein	NA	NA	NA	NA
WP_000482650.1\|2313800_2313908_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_001064820.1\|2314555_2316319_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.5e-37	24.7
WP_160195054.1\|2316343_2318077_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.6e-30	25.5

DBSCAN-SWA_179

2321538 : 2327309

Staphylococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000971546.1\|2321538_2322654_+	pyridoxal phosphate-dependent aminotransferase family protein	V5LQ39	Emiliania_huxleyi_virus	7.1e-21	24.7
WP_000286879.1\|2322664_2323357_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_000200946.1\|2323367_2323835_+	hypothetical protein	NA	NA	NA	NA
WP_000783428.1\|2323886_2324864_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	A0A2H4PQH7	Staphylococcus_phage	7.1e-142	76.2
WP_000916704.1\|2324865_2325813_-	bi-component gamma-hemolysin HlgCB subunit C	A0A2I6PER8	Staphylococcus_phage	3.2e-139	77.5
WP_000594519.1\|2326379_2327309_-	bi-component gamma-hemolysin HlgAB subunit A	A0A2H4PQI5	Staphylococcus_phage	3.2e-120	71.1

DBSCAN-SWA_180

2335184 : 2335916

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000615461.1\|2335184_2335916_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-25	34.7

DBSCAN-SWA_181

2352576 : 2354136

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692645.1\|2352576_2354136_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_182

2373573 : 2374608

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655972.1\|2373573_2374608_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	5.8e-17	26.6

DBSCAN-SWA_183

2386187 : 2390084

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000477339.1\|2386187_2387561_-	heme sensor histidine kinase HssS	A0A1V0SGX0	Hokovirus	1.3e-13	29.8
WP_000249497.1\|2387553_2388228_-	DNA-binding heme response regulator HssR	W8CYM9	Bacillus_phage	3.6e-52	45.2
WP_000761395.1\|2388363_2389419_+	ABC transporter permease	NA	NA	NA	NA
WP_001229911.1\|2389418_2390084_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-36	38.8

DBSCAN-SWA_184

2393823 : 2395032

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000999168.1\|2393823_2395032_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	4.6e-34	26.4

DBSCAN-SWA_185

2407127 : 2408027

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000524829.1\|2407127_2408027_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.2e-15	28.7

DBSCAN-SWA_186

2415399 : 2415819

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000920238.1\|2415399_2415819_-	FosB/FosD family fosfomycin resistance bacillithiol transferase	Q2LI91	Bacillus_phage	1.0e-36	61.1

DBSCAN-SWA_187

2421872 : 2422754

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000235289.1\|2421872_2422754_+	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	3.8e-62	46.3

DBSCAN-SWA_188

2430632 : 2431268

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285450.1\|2430632_2431268_+	HAD family hydrolase	A7J6N1	Paramecium_bursaria_Chlorella_virus	1.6e-09	27.1

DBSCAN-SWA_189

2444836 : 2448806

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011447058.1\|2444836_2445475_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JQU5	Staphylococcus_phage	2.6e-36	48.1
WP_000684140.1\|2445785_2446910_+	NAD(P)-binding protein	A0A2K9L3K5	Tupanvirus	4.2e-13	22.8
WP_000417016.1\|2446990_2447944_-	2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-31	28.9
WP_000737705.1\|2448305_2448806_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	2.0e-07	39.3

DBSCAN-SWA_190

2452722 : 2453532

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000717388.1\|2452722_2453532_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	9.4e-07	41.3

DBSCAN-SWA_191

2472515 : 2473121

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000913019.1\|2472515_2473121_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.8e-13	30.6

DBSCAN-SWA_192

2485204 : 2488372

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000592313.1\|2485204_2488372_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	3.6e-62	21.9

DBSCAN-SWA_193

2512070 : 2513737

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195060.1\|2512070_2512880_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	4.8e-19	30.9
WP_000155383.1\|2512876_2513737_+	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	9.7e-10	23.9

DBSCAN-SWA_194

2518603 : 2522918

Burkholderia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195061.1\|2518603_2520463_+	DUF262 domain-containing protein	E5E3X3	Burkholderia_phage	6.5e-27	34.6
WP_000655243.1\|2520674_2520857_+	hypothetical protein	NA	NA	NA	NA
WP_000130141.1\|2521253_2522918_+	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.8e-44	25.8

DBSCAN-SWA_195

2528011 : 2531027

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001015500.1\|2528011_2528860_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.0e-44	39.2
WP_001566764.1\|2529078_2529204_+	hypothetical protein	NA	NA	NA	NA
WP_000333458.1\|2529394_2530003_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_020978309.1\|2530286_2531027_-	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	1.1e-14	29.9

DBSCAN-SWA_196

2537347 : 2538760

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000169224.1\|2537347_2538760_+	6-phospho-beta-galactosidase	A0A0B5JD41	Pandoravirus	3.0e-48	28.9

DBSCAN-SWA_197

2542727 : 2544290

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000792342.1\|2542727_2544290_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	24.6

DBSCAN-SWA_198

2554491 : 2555460

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989083.1\|2554491_2555460_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.3e-15	28.8

DBSCAN-SWA_199

2571470 : 2572379

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167867.1\|2571470_2572379_+	arginase	A0A1V0SJM8	Klosneuvirus	3.2e-27	32.0

DBSCAN-SWA_200

2575970 : 2583425

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049308177.1\|2575970_2583425_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	2.4e-19	23.9

DBSCAN-SWA_201

2589681 : 2592501

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000334465.1\|2589681_2591487_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1H1Z3	Paramecium_bursaria_Chlorella_virus	2.0e-97	38.6
WP_000908189.1\|2591718_2592501_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.4e-09	32.1

DBSCAN-SWA_202

2603693 : 2607527

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000070866.1\|2603693_2604137_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	5.6e-38	53.7
WP_000160304.1\|2604257_2604968_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_001083324.1\|2605282_2605945_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001242311.1\|2606225_2607527_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	3.6e-133	58.9

DBSCAN-SWA_203

2615465 : 2617076

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159960.1\|2615465_2617076_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.7e-146	49.6

DBSCAN-SWA_204

2626400 : 2634150

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000273356.1\|2626400_2627000_+	thymidine kinase	G3MBK1	Bacillus_virus	6.2e-32	42.9
WP_000460242.1\|2627000_2628077_+	peptide chain release factor 1	NA	NA	NA	NA
WP_000248735.1\|2628063_2628900_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_160195063.1\|2628932_2630030_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	6.1e-41	43.7
WP_000697336.1\|2630026_2630446_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_000654185.1\|2630552_2631077_+	TIGR01440 family protein	NA	NA	NA	NA
WP_000120488.1\|2631103_2632342_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.1e-102	52.7
WP_000048712.1\|2632369_2632999_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_000723418.1\|2633022_2634150_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.0e-27	29.9

DBSCAN-SWA_205

2644551 : 2644947

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000932694.1\|2644551_2644947_+	single-stranded DNA-binding protein	A0A1J0MFK5	Staphylococcus_phage	1.3e-14	38.5

DBSCAN-SWA_206

2650777 : 2651425

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001187630.1\|2650777_2651425_-	HD domain-containing protein	H2ED17	Moumouvirus	8.0e-09	27.0

DBSCAN-SWA_207

2658625 : 2660146

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178943.1\|2658625_2660146_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-58	33.9

DBSCAN-SWA_208

2665817 : 2667845

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000546597.1\|2665817_2667845_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	2.3e-25	23.5

DBSCAN-SWA_209

2672995 : 2676380

Clostridium_botulinum_C_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000621175.1\|2672995_2673358_+	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.2e-07	32.8
WP_000390829.1\|2673707_2674709_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_001052491.1\|2674827_2675154_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_001190829.1\|2675155_2675635_+	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001041102.1\|2675609_2676380_+	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	1.3e-21	34.9

DBSCAN-SWA_210

2690674 : 2695398

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000094580.1\|2690674_2692204_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	5.5e-08	28.1
WP_020978284.1\|2692233_2693253_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000196911.1\|2693374_2693629_-	ACT domain-containing protein	NA	NA	NA	NA
WP_000047813.1\|2693628_2695398_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	1.2e-62	29.9

DBSCAN-SWA_211

2699158 : 2713004

Moraxella_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160195066.1\|2699158_2700184_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.4e-61	39.4
WP_000106327.1\|2700285_2701896_-	MutS family DNA mismatch repair protein	A0A0N9R0S5	Chrysochromulina_ericina_virus	3.3e-19	26.9
WP_001792272.1\|2701984_2702113_+	hypothetical protein	NA	NA	NA	NA
WP_000602067.1\|2702256_2704185_-	ABC-F type ribosomal protection protein	A0A2K9L0W2	Tupanvirus	1.9e-53	30.4
WP_001283612.1\|2704437_2705073_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_072490427.1\|2705427_2706456_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_000581077.1\|2706515_2706740_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_001052276.1\|2706946_2708197_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	2.0e-40	31.5
WP_000790325.1\|2708379_2709330_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_000141430.1\|2709478_2710963_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	1.5e-18	25.4
WP_001253305.1\|2710959_2711919_+	carbohydrate kinase	NA	NA	NA	NA
WP_000688492.1\|2712287_2713004_-	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	2.3e-25	32.6

DBSCAN-SWA_212

2720194 : 2722171

uncultured_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917289.1\|2720194_2720479_+	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
WP_000240642.1\|2720554_2722171_+	chaperonin GroEL	A0A240F779	uncultured_virus	3.4e-157	54.7

DBSCAN-SWA_213

2728022 : 2747321

Staphylococcus_phage(89.47%)

integrase

attL 2717808:2717822|attR 2744443:2744457

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2717808:2717822	attL	NA	NA	NA	NA
WP_000791419.1\|2728022_2729075_+	bi-component leukocidin LukGH subunit H	A0A2I6PER8	Staphylococcus_phage	2.4e-34	31.8
WP_000595326.1\|2729096_2730113_+	bi-component leukocidin LukGH subunit G	A0A2I6PER8	Staphylococcus_phage	5.1e-26	29.3
WP_000857191.1\|2731231_2732269_-\|integrase	site-specific integrase	A0EWV2	Staphylococcus_phage	9.1e-180	100.0
WP_000825947.1\|2732327_2732792_-	hypothetical protein	A0EWV3	Staphylococcus_phage	1.1e-28	100.0
WP_000705248.1\|2732891_2733074_-	hypothetical protein	M9NSW6	Staphylococcus_phage	4.1e-27	100.0
WP_000804507.1\|2733118_2733976_-	restriction endonuclease	R9QTP0	Staphylococcus_phage	3.5e-161	99.6
WP_001083967.1\|2733987_2734704_-	helix-turn-helix domain-containing protein	R9QTP6	Staphylococcus_phage	9.2e-131	100.0
WP_000639927.1\|2734867_2735110_+	DUF739 family protein	Q9G038	Staphylococcus_virus	2.8e-39	100.0
WP_000435341.1\|2735123_2735384_+	transcriptional regulator	A7TW91	Staphylococcus_phage	2.7e-40	100.0
WP_000351243.1\|2735407_2735947_-	hypothetical protein	A7TW92	Staphylococcus_phage	1.7e-97	100.0
WP_001148341.1\|2736003_2736759_+	oxidoreductase	A0A1P8L6G2	Staphylococcus_phage	3.3e-139	100.0
WP_001148861.1\|2736774_2736972_+	hypothetical protein	A0A1W6JPV3	Staphylococcus_phage	1.2e-24	100.0
WP_000939496.1\|2737002_2737143_+	hypothetical protein	A0A2I6PDG0	Staphylococcus_phage	1.9e-16	100.0
WP_000275058.1\|2737157_2737790_-	hypothetical protein	A7TW95	Staphylococcus_phage	1.5e-113	100.0
WP_001120197.1\|2737844_2738165_+	DUF771 domain-containing protein	A0A2I6PDH6	Staphylococcus_phage	1.5e-56	100.0
WP_000066023.1\|2738161_2738323_+	DUF1270 family protein	C8CGY5	Staphylococcus_phage	2.0e-17	88.7
WP_000165366.1\|2738412_2738715_+	DUF2482 family protein	A0A0F6N3N3	Staphylococcus_phage	8.0e-28	62.0
WP_039702428.1\|2738719_2738980_+	DUF1108 family protein	A0A2I6PEM2	Staphylococcus_phage	1.6e-40	93.0
WP_001004336.1\|2738992_2739529_+	hypothetical protein	A0A0F6N4M6	Staphylococcus_phage	1.4e-80	100.0
WP_000139720.1\|2739529_2740153_+	DUF1071 domain-containing protein	A0A2H4PQQ6	Staphylococcus_phage	1.4e-114	100.0
WP_039702429.1\|2740152_2740608_+	single-stranded DNA-binding protein	A0A0H3U4B5	Staphylococcus_phage	1.4e-55	71.2
WP_039702430.1\|2740619_2741294_+	hypothetical protein	A1KX69	Staphylococcus_virus	1.4e-128	97.8
WP_039702431.1\|2741286_2742030_+	hypothetical protein	C8CGZ1	Staphylococcus_phage	1.0e-60	77.5
WP_039702432.1\|2742039_2742819_+	ATP-binding protein	A0A068A1Z4	Staphylococcus_phage	1.3e-143	98.1
WP_000256594.1\|2742812_2742971_+	hypothetical protein	A0A2I6PDX0	Staphylococcus_phage	4.5e-22	98.1
WP_039702433.1\|2742983_2743205_+	DUF3269 family protein	A0A0H3U2V4	Staphylococcus_phage	8.4e-35	97.3
WP_000401953.1\|2743214_2743622_+	RusA family crossover junction endodeoxyribonuclease	A9CR74	Staphylococcus_phage	1.0e-73	100.0
WP_039702434.1\|2743621_2743807_+	DUF3113 family protein	A0A0H3U473	Staphylococcus_phage	2.7e-26	98.4
WP_039702435.1\|2743807_2744167_+	phage protein	D2JGL0	Staphylococcus_phage	3.8e-61	98.3
WP_000022722.1\|2744166_2744421_+	DUF3310 domain-containing protein	A0A2K9VBW1	Staphylococcus_phage	1.6e-42	100.0
WP_039702436.1\|2744426_2744669_+	phage protein	A0A2K9VBX5	Staphylococcus_phage	2.8e-39	97.5
2744443:2744457	attR	NA	NA	NA	NA
WP_039702437.1\|2744683_2745085_+	hypothetical protein	A0EWR3	Staphylococcus_virus	6.0e-71	99.2
WP_000982697.1\|2745081_2745498_+	hypothetical protein	A0A0D4DC71	Staphylococcus_phage	1.0e-17	60.3
WP_039702438.1\|2745494_2745779_+	hypothetical protein	Q9G014	Staphylococcus_virus	6.3e-43	95.7
WP_039702439.1\|2745771_2746026_+	DUF1024 family protein	A0A2I6PDI5	Staphylococcus_phage	3.2e-38	98.8
WP_000265042.1\|2746145_2746346_+	DUF1514 domain-containing protein	A0A2I6PDJ9	Staphylococcus_phage	1.4e-28	100.0
WP_000590122.1\|2746373_2746790_+	hypothetical protein	G4KNP7	Staphylococcus_phage	1.3e-76	100.0
WP_000988330.1\|2747021_2747321_+	HNH endonuclease	G4KNP8	Staphylococcus_phage	4.6e-52	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP047790.1|WP_000356963.1|1869505_1869709_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP047790.1|WP_000356963.1|1869505_1869709_+|hypothetical-protein

1869505_1869709_+

67 aa aa

1867732-1870904

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047790_5	Unclear	5.1\|1208937\|32\|NZ_CP047790\|CRISPRCasFinder	1208937-1208968	32	1869809-1869778	2
NZ_CP047790_7	Orphan	7.1\|1766123\|25\|NZ_CP047790\|CRISPRCasFinder	1766123-1766147	25	1869821-1869797	1

1. spacer 5.1|1208937|32|NZ_CP047790|CRISPRCasFinder matches to NZ_CP047790 position: 1869809-1869778, mismatch: 2

tttcgaaaagaaattctacaaacaatgcaagt	CRISPR spacer
tttcgaaaagaaattctacaggcaatgcaagt	Protospacer
********************..**********

2. spacer 7.1|1766123|25|NZ_CP047790|CRISPRCasFinder matches to NZ_CP047790 position: 1869821-1869797, mismatch: 1

caacaaagagaatttcgaaaagaaa	CRISPR spacer
caacacagagaatttcgaaaagaaa	Protospacer
***** *******************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047790

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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