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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP047844 Staphylococcus aureus strain UP_620 plasmid unnamed, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP047843 Staphylococcus aureus strain UP_620 chromosome, complete genome 7 crisprs cas3,DEDDh,DinG,csa3,WYL 6 3 10 0

Results visualization

1. NZ_CP047843
NZ_CP047843 04000008000001200000160000020000002400000 CRISPR 1 2 3 4 5 6 7 Self-targeting Prophage 1 2 3 4 5 6 7 8 9 10 anti-CRISPR
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_1 774397-774477 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_2 779890-779973 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_3 1041845-1041986 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_4 1351800-1351881 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_5 1699520-1699605 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_6 1786038-1786120 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP047843_7 2450289-2450386 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 2738764-2738792 0 1.0
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1139145-1139173 0 1.0
NZ_CP047843_2 2.1|779916|32|NZ_CP047843|CRISPRCasFinder 779916-779947 32 NZ_CP047843.1 1068560-1068591 0 1.0
NZ_CP047843_2 2.1|779916|32|NZ_CP047843|CRISPRCasFinder 779916-779947 32 NZ_CP047843.1 1439432-1439463 0 1.0
NZ_CP047843_2 2.1|779916|32|NZ_CP047843|CRISPRCasFinder 779916-779947 32 NZ_CP047843.1 1992342-1992373 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1068564-1068594 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1439436-1439466 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1992346-1992376 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 128885-128915 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 128943-128973 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1227381-1227411 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1351781-1351811 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 2491026-2491056 0 1.0
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 2491084-2491114 0 1.0
NZ_CP047843_3 3.2|1041928|33|NZ_CP047843|CRISPRCasFinder 1041928-1041960 33 NZ_CP047843.1 1439377-1439409 0 1.0
NZ_CP047843_3 3.2|1041928|33|NZ_CP047843|CRISPRCasFinder 1041928-1041960 33 NZ_CP047843.1 330584-330616 0 1.0
NZ_CP047843_4 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder 1351824-1351857 34 NZ_CP047843.1 1227424-1227457 0 1.0
NZ_CP047843_4 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder 1351824-1351857 34 NZ_CP047843.1 1439331-1439364 0 1.0
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1666924-1666952 1 0.966
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 248297-248325 1 0.966
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 330705-330733 1 0.966
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 330760-330788 1 0.966
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1788345-1788373 1 0.966
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1843533-1843561 1 0.966
NZ_CP047843_2 2.1|779916|32|NZ_CP047843|CRISPRCasFinder 779916-779947 32 NZ_CP047843.1 1699488-1699519 1 0.969
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 940276-940306 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1666928-1666958 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1699492-1699522 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 248291-248321 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 248346-248376 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 330699-330729 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 330754-330784 1 0.968
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1843527-1843557 1 0.968
NZ_CP047843_4 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder 1351824-1351857 34 NZ_CP047843.1 128986-129019 1 0.971
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 2001750-2001778 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 128891-128919 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 128949-128977 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1227387-1227415 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 1351787-1351815 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 2491032-2491060 2 0.931
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 NZ_CP047843.1 2491090-2491118 2 0.931
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 2001754-2001784 2 0.935
NZ_CP047843_3 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder 1041871-1041901 31 NZ_CP047843.1 1139139-1139169 2 0.935
NZ_CP047843_4 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder 1351824-1351857 34 NZ_CP047843.1 1041824-1041857 2 0.941
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 233132-233163 2 0.938
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 330588-330619 2 0.938
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 1143337-1143368 2 0.938
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 1227325-1227356 2 0.938
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 1439374-1439405 2 0.938
NZ_CP047843_5 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder 1699547-1699578 32 NZ_CP047843.1 1843644-1843675 2 0.938

1. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 2738764-2738792, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

2. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1139145-1139173, mismatch: 0, identity: 1.0

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtagaatttcttttcgaaa	Protospacer
*****************************

3. spacer 2.1|779916|32|NZ_CP047843|CRISPRCasFinder matches to position: 1068560-1068591, mismatch: 0, identity: 1.0

cgcattgcctgtagaatttcttttcgaaattc	CRISPR spacer
cgcattgcctgtagaatttcttttcgaaattc	Protospacer
********************************

4. spacer 2.1|779916|32|NZ_CP047843|CRISPRCasFinder matches to position: 1439432-1439463, mismatch: 0, identity: 1.0

cgcattgcctgtagaatttcttttcgaaattc	CRISPR spacer
cgcattgcctgtagaatttcttttcgaaattc	Protospacer
********************************

5. spacer 2.1|779916|32|NZ_CP047843|CRISPRCasFinder matches to position: 1992342-1992373, mismatch: 0, identity: 1.0

cgcattgcctgtagaatttcttttcgaaattc	CRISPR spacer
cgcattgcctgtagaatttcttttcgaaattc	Protospacer
********************************

6. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1068564-1068594, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

7. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1439436-1439466, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

8. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1992346-1992376, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

9. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 128885-128915, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

10. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 128943-128973, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

11. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1227381-1227411, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

12. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1351781-1351811, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

13. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 2491026-2491056, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

14. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 2491084-2491114, mismatch: 0, identity: 1.0

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttcgaaattctct	Protospacer
*******************************

15. spacer 3.2|1041928|33|NZ_CP047843|CRISPRCasFinder matches to position: 1439377-1439409, mismatch: 0, identity: 1.0

cattattgtaagctgacttttcgtcagcttctt	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctt	Protospacer
*********************************

16. spacer 3.2|1041928|33|NZ_CP047843|CRISPRCasFinder matches to position: 330584-330616, mismatch: 0, identity: 1.0

cattattgtaagctgacttttcgtcagcttctt	CRISPR spacer
cattattgtaagctgacttttcgtcagcttctt	Protospacer
*********************************

17. spacer 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder matches to position: 1227424-1227457, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

18. spacer 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder matches to position: 1439331-1439364, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

19. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1666924-1666952, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

20. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 248297-248325, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

21. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 330705-330733, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

22. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 330760-330788, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcttgtagaatttcttttcgaaa	Protospacer
*******.*********************

23. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1788345-1788373, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

24. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1843533-1843561, mismatch: 1, identity: 0.966

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcttttcgaaa	Protospacer
********.********************

25. spacer 2.1|779916|32|NZ_CP047843|CRISPRCasFinder matches to position: 1699488-1699519, mismatch: 1, identity: 0.969

cgcattgcctgtagaatttcttttcgaaattc	CRISPR spacer
cgcattgcctgtagaatttctttacgaaattc	Protospacer
*********************** ********

26. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 940276-940306, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttcttttagaaattctct	Protospacer
******************** **********

27. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1666928-1666958, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgtctgtagaatttcttttcgaaattctct	Protospacer
***.***************************

28. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1699492-1699522, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcctgtagaatttctttacgaaattctct	Protospacer
******************* ***********

29. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 248291-248321, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgtctgtagaatttcttttcgaaattctct	Protospacer
***.***************************

30. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 248346-248376, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttacctgtagaatttcttttcgaaattctct	Protospacer
**.****************************

31. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 330699-330729, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcttgtagaatttcttttcgaaattctct	Protospacer
****.**************************

32. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 330754-330784, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgcttgtagaatttcttttcgaaattctct	Protospacer
****.**************************

33. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1843527-1843557, mismatch: 1, identity: 0.968

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgtctgtagaatttcttttcgaaattctct	Protospacer
***.***************************

34. spacer 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder matches to position: 128986-129019, mismatch: 1, identity: 0.971

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagaggaattggattcccaat	Protospacer
******************.***************

35. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 2001750-2001778, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtctgtagaatttcctttcgaaa	Protospacer
********.***********.********

36. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 128891-128919, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

37. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 128949-128977, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

38. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1227387-1227415, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

39. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 1351787-1351815, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

40. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 2491032-2491060, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

41. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to position: 2491090-2491118, mismatch: 2, identity: 0.931

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgcctgtagaatttcttttcgaaa	Protospacer
*******..********************

42. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 2001754-2001784, mismatch: 2, identity: 0.935

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgtctgtagaatttcctttcgaaattctct	Protospacer
***.************.**************

43. spacer 3.1|1041871|31|NZ_CP047843|CRISPRCasFinder matches to position: 1139139-1139169, mismatch: 2, identity: 0.935

ttgcctgtagaatttcttttcgaaattctct	CRISPR spacer
ttgtttgtagaatttcttttcgaaattctct	Protospacer
***..**************************

44. spacer 4.1|1351824|34|NZ_CP047843|CRISPRCasFinder matches to position: 1041824-1041857, mismatch: 2, identity: 0.941

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagaggaattggatttccaat	Protospacer
******************.*********.*****

45. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 233132-233163, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

46. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 330588-330619, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

47. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 1143337-1143368, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

48. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 1227325-1227356, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

49. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 1439374-1439405, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgtaagctgacttttcgtcagct	Protospacer
*********** ************ *******

50. spacer 5.1|1699547|32|NZ_CP047843|CRISPRCasFinder matches to position: 1843644-1843675, mismatch: 2, identity: 0.938

gcacattattgaaagctgacttttggtcagct	CRISPR spacer
gcacattattgaaagctgactattggccagct	Protospacer
********************* ****.*****

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP047843_1 1.1|774423|29|NZ_CP047843|CRISPRCasFinder 774423-774451 29 MN693281 Marine virus AFVG_25M371, complete genome 6448-6476 7 0.759
NZ_CP047843_2 2.1|779916|32|NZ_CP047843|CRISPRCasFinder 779916-779947 32 NZ_CP009619 Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence 270872-270903 8 0.75
NZ_CP047843_6 6.1|1786064|31|NZ_CP047843|CRISPRCasFinder 1786064-1786094 31 KM359505 Prochlorococcus phage P-TIM68, complete genome 102706-102736 8 0.742

1. spacer 1.1|774423|29|NZ_CP047843|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tgcattgtttgtagaatttcttttcgaaa	CRISPR spacer
tgcattgtttgtaggatttcttctaagtg	Protospacer
**************.*******.* .. .

2. spacer 2.1|779916|32|NZ_CP047843|CRISPRCasFinder matches to NZ_CP009619 (Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence) position: , mismatch: 8, identity: 0.75

cgcattgcctgtagaatttcttttcgaaattc	CRISPR spacer
tgcattacctgtagcatttcttttttcaacta	Protospacer
.*****.******* *********.  **.* 

3. spacer 6.1|1786064|31|NZ_CP047843|CRISPRCasFinder matches to KM359505 (Prochlorococcus phage P-TIM68, complete genome) position: , mismatch: 8, identity: 0.742

cagagaatttcgaaaagaaattctacagacc	CRISPR spacer
ttaactatttccaaaagaaattatacagatc	Protospacer
. .*  ***** ********** ******.*

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 711564 : 719384 10 Hokovirus(16.67%) NA NA
DBSCAN-SWA_2 731355 : 746030 14 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_3 832986 : 879166 70 Staphylococcus_phage(66.18%) capsid,head,terminase,portal,integrase,protease,tail,plate,holin attL 828294:828309|attR 886053:886068
DBSCAN-SWA_4 965755 : 1009338 38 Staphylococcus_virus(33.33%) protease,transposase,tRNA,bacteriocin NA
DBSCAN-SWA_5 1043433 : 1051906 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 1493426 : 1579707 101 Staphylococcus_phage(61.84%) capsid,head,terminase,tRNA,portal,protease,integrase,tail,plate,holin attL 1532941:1532958|attR 1578224:1578241
DBSCAN-SWA_7 1638528 : 1646858 7 Staphylococcus_phage(16.67%) tRNA NA
DBSCAN-SWA_8 1714712 : 1723755 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_9 1848645 : 1921786 71 Staphylococcus_phage(94.12%) protease,tRNA NA
DBSCAN-SWA_10 2046348 : 2052027 6 Staphylococcus_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage