CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047850	Staphylococcus aureus strain UP_403 plasmid unnamed, complete sequence	0 crisprs	csa3	0	0	1	0
NZ_CP047849	Staphylococcus aureus strain UP_403 chromosome, complete genome	9 crisprs	csa3,cas3,DinG,DEDDh,WYL	10	3	216	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047849_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_1

981980-982075

Orphan

Consensus_repeat	Method
TTTTATGCATGTGCTCGACGCATGTATCCCTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047849_1

>merge|NZ_CP047849|1|981980-982075|CRISPRCasFinder
TTTTATGCATGTGCTCGACGCATGTATCCCTCTCCTTCCTTACAACTTTTAGTTGTTAGGGGCTTTTATGCATGTGCTCGGCGCATGTATCCCTCT

>NZ_CP047849|1|1|981980-982075|CRISPRCasFinder
TTTTATGCATGTGCTCGACGCATGTATCCCTCT	CCTTCCTTACAACTTTTAGTTGTTAGGGGC
TTTTATGCATGTGCTCGGCGCATGTATCCCTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000033477.1\|982527_983103_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|227065
NZ_CP047849.1\|WP_000514290.1\|972188_972851_-\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP047849.1\|WP_000709290.1\|986850_988329_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_CP047849.1\|WP_000381849.1\|973999_975361_-\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP047849.1\|WP_000505965.1\|978169_978712_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368297
NZ_CP047849.1\|WP_000040054.1\|976028_977747_-\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_CP047849.1\|WP_000032728.1\|991396_993586_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	unknown	unknown	gnl\|CDD\|234921
NZ_CP047849.1\|WP_000666799.1\|993578_994250_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	unknown	unknown	gnl\|CDD\|235140
NZ_CP047849.1\|WP_001289614.1\|975558_975792_+\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_CP047849.1\|WP_000638456.1\|972983_974003_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224213
NZ_CP047849.1\|WP_000238664.1\|988343_988910_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|223376
NZ_CP047849.1\|WP_000030812.1\|988912_989941_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_CP047849.1\|WP_000009069.1\|980362_981658_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000483713.1\|989933_991418_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235984
NZ_CP047849.1\|WP_000064214.1\|981809_981944_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000921968.1\|983117_984518_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP047849.1\|WP_000437472.1\|977749_978016_-\|phosphocarrier-protein-HPr	unknown	unknown	gnl\|CDD\|237503
NZ_CP047849.1\|WP_001101908.1\|985581_986829_-\|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl\|CDD\|237507
NZ_CP047849.1\|WP_000685079.1\|978765_979938_-\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP047849.1\|WP_000273253.1\|984510_985317_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000033477.1\|982527_983103_+\|ECF-transporter-S-component	gnl\|CDD\|227065	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism].	4.34592e-70
NZ_CP047849.1\|WP_000514290.1\|972188_972851_-\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	4.35421e-66
NZ_CP047849.1\|WP_000709290.1\|986850_988329_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_CP047849.1\|WP_000381849.1\|973999_975361_-\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	2.48829e-165
NZ_CP047849.1\|WP_000505965.1\|978169_978712_-\|hypothetical-protein	gnl\|CDD\|368297	pfam05128, DUF697, Domain of unknown function (DUF697). Family of bacterial hypothetical proteins that is sometimes associated with GTPase domains.	0.00779365
NZ_CP047849.1\|WP_000040054.1\|976028_977747_-\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_CP047849.1\|WP_000032728.1\|991396_993586_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurL	gnl\|CDD\|234921	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL.	0
NZ_CP047849.1\|WP_000666799.1\|993578_994250_-\|phosphoribosylformylglycinamidine-synthase-subunit-PurQ	gnl\|CDD\|235140	PRK03619, PRK03619, phosphoribosylformylglycinamidine synthase subunit PurQ.	1.77638e-140
NZ_CP047849.1\|WP_001289614.1\|975558_975792_+\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	5.00495e-16
NZ_CP047849.1\|WP_000638456.1\|972983_974003_-\|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	6.42118e-76
NZ_CP047849.1\|WP_000238664.1\|988343_988910_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|223376	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism].	7.23817e-92
NZ_CP047849.1\|WP_000030812.1\|988912_989941_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP047849.1\|WP_000483713.1\|989933_991418_-\|amidophosphoribosyltransferase	gnl\|CDD\|235984	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional.	0
NZ_CP047849.1\|WP_000921968.1\|983117_984518_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.67975e-64
NZ_CP047849.1\|WP_000437472.1\|977749_978016_-\|phosphocarrier-protein-HPr	gnl\|CDD\|237503	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional.	2.44795e-51
NZ_CP047849.1\|WP_001101908.1\|985581_986829_-\|phosphoribosylamine--glycine-ligase	gnl\|CDD\|237507	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP047849.1\|WP_000685079.1\|978765_979938_-\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	5.6543e-145
NZ_CP047849.1\|WP_000273253.1\|984510_985317_+\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	7.39205e-29

>NZ_CP047849.1|WP_000064214.1|981809_981944_+|hypothetical-protein
MSNENQNKKAAEKAKEVEEKLKDKKEEKTEDINQTKQDIQDTLN
>NZ_CP047849.1|WP_000009069.1|980362_981658_-|hypothetical-protein
MSFLRKHAEIIFSYLIGIVSLFTGLIILINLPLIKQLNGGKKVDTHVHNVWEFLNAFFSEIIKVMSRFIGNFPIVSAIVIIIFGILVMLIGHTLLRTIKYDYDISIFFLVIGIMYFIITLILMTQVYGFFAVIFIIPFTIHIGYIVYKDELNQENVKNHFMWIIVSYGISYLITQIALYGRIDANEIESIDILSVNAFFIIMWLLGQMAIWNFLFLRRALPLTKQELGEEEPELSRTSKGNVTNQTKIHLKQLQDKTTEYARKTRRSVDLDKIRAKRDKFKKKVNDIIDIQEDDIPDWMRKPKWVKPMYVELFCGVVIFLFTFLEFNNRNALFVSGDWKLSQTQYVIEWVTLLILLFIIIAYIATTLTFHLKGKFYYLQLFMGSILFFKLLTEFINIMIHGLLLSVFITPTLLLMLLAIIISYSLQLRERP
>NZ_CP047849.1|WP_000685079.1|978765_979938_-|class-I-SAM-dependent-rRNA-methyltransferase
MKIATLNKGKETKYFNGYPLIEEEDIYSQDHLKEGDIFQIVTDKSQYVATAYVGRQHKGLGWVLTYDKAQQINTAFFVKLFNTALAERDYYFNIDGTNAFRLFNAEGDGVGGLTIDNYDGHLLIQWYSKGIYKFKYAILEAVRKVFDYKSIYEKVRFKDSEYSGGFVEGDAPEFPIVIEENFTFYNVDLEDGLMTGIFLDQKEVRKKLRDQYAKERHVLNLFSYTGAFSAIAASEASSTTSVDLANRSRSLTEENFGLNAIDPKSQYIYVMDTFDFYKYAARHGHSYDTIVIDPPSFARNKKRTFSVQKDYDKLINGALNILSSEGTLLLCTNASVYPLKQFKNTIKKTLEESGVDYELTEVMGLPKDFKTHPHYKPSKYLKAVFVNIRH
>NZ_CP047849.1|WP_000505965.1|978169_978712_-|hypothetical-protein
MGFKNNLTSNLTNKIGNSVFKIENVDGKGAMPTTIQELRERRQRAEAIVKRKSLMSSTMSVVPIPGLDFGVDLKLMKDIIEDVNKIYGLDHKQVNSLGDDVKERIMSAAAIQGSQFIGKRISNAFLKIVIRDVAKRTAAKQTKWFPVVGQAVSASISYYFMNKIGKDHIQKCENVIKNVM
>NZ_CP047849.1|WP_000437472.1|977749_978016_-|phosphocarrier-protein-HPr
MEQNSYVIIDETGIHARPATMLVQTASKFDSDIQLEYNGKKVNLKSIMGVMSLGVGKDAEITIYADGSDESDAIQAISDVLSKEGLTK
>NZ_CP047849.1|WP_000040054.1|976028_977747_-|phosphoenolpyruvate--protein-phosphotransferase
MSKLIKGIAASDGVAIAKAYLLVEPDLTFDKNEKVTDVEGEVAKFNSAIEASKVELTKIRNNAEVQLGADKAAIFDAHLLVLDDPELIQPIQDKIKNENANAATALTDVTTQFVTIFESMDNEYMKERAADIRDVSKRVLSHILGVELPNPSMIDESVVIVGNDLTPSDTAQLNKEFVQGFATNIGGRTSHSAIMSRSLEIPAIVGTKSITQEVKQGDMIIVDGLNGDVIVNPTEDELIAYQDKRERYFADKKELQKLRDADTVTVDGVHAELAANIGTPNDLPGVIENGAQGIGLYRTEFLYMGRDQMPTEEEQFEAYKEVLEAMGGKRVVVRTLDIGGDKELSYLNLPEEMNPFLGYRAIRLCLAQQDIFRPQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSIGTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAGDETAIPLLLGLGLDEFSMSATSILKARRQINGLSKNEMTELANRAVDCATQEEVIELVNNYVK
>NZ_CP047849.1|WP_001289614.1|975558_975792_+|glutaredoxin-family-protein
MSEIIVYTQNDCPPCTFVKNYLNEHHIDFEERNINNQQYRNEMIDFDAFSTPFILLNGNPMYHVDLDEINKVLNIQD
>NZ_CP047849.1|WP_000381849.1|973999_975361_-|cytochrome-ubiquinol-oxidase-subunit-I
MDTVEISRFLTAMTLAVHIIFATIGVGMPLMFAIAEFLGIRKNDLQYIAMAKRWAKAYTITVAVGVVTGTIIGLQLSLIWPTFMEMGGHVIALPLFMETFAFFFEAIFLSIYLYTWDRFKNKWTHFLISIPVIIGGSFSAFFITSVNSFMNTPAGFELKNGKMVNVQPIEAMFNPSFIVRSFHVITTAGMTMAFVIASIAAFKLLRNRQPKDTVYHKKALKMSMIVGFFSTLLSMLAGDLSAKFLHKFQPEKLAAYEWHFDTSSHAKLLLFGVLDEKTQQVKGAIELPGLLSFLADNSVKTKVQGLNDFPKSLHPPMIVHYFFDLMVTMGILCFVISGVYVLTLMFKKLRKFSTHKWMLYGILLTGPASMLAIEFGWFLTEMGRQPWIVRGYMRVAEAATQAGGITFVTILFGILYIILMYTCAYVLIRMFKNKPAYEDVNRLAKKQGGEIEK
>NZ_CP047849.1|WP_000638456.1|972983_974003_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MIYAFIGITVLWLFLFCYIIIASIDFGAGFFALHSKLTGDEKKINHLISRYLNPVWEVTNVFFVFFFVGFVGFFPESIKYLGTVLLIPGSIALIMISLRNSFYAFENYGQDTKLAWMIMYGVSGLLIPASLSTALTITEGGYINVRNNVIDLDWVQLLLSPFAWSVVFLAIISVLYISSGFLTYYAKKANDEPAYNLTRQWHIFLGPPMIIICLFVFLSLRIQNSEHFYSAVFDYWWMFGISFLFFALASLLTFFKKKHGLAFVFVILQMMFAFFGYGISKLPYLLYPFVKITDAYVNPEMGWTLVIVFILGLLLLLPSLILLLRLFVFDKEYVEGKKS
>NZ_CP047849.1|WP_000514290.1|972188_972851_-|TrkA-family-potassium-uptake-protein
MGKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIATHAVVADTTDEAVMKSLGIRNFDHVIVAIGENIQSSTLTTLILKELGVKKVTAKAQNDYHAKILNKIGADTVVHPERDMGRRIAHNVASASVLDYLELADEHSIVELKATEKMAGQSIIDLDIRAQYGINIIAIKRGKEFIISPNPNINLEIGDILIMIGHDNDLNRFEKNIATR
>NZ_CP047849.1|WP_000033477.1|982527_983103_+|ECF-transporter-S-component
MSKGLKLSEILVTVLISVVFAVIYNLWWFVYNGVQATGLHLEQLTNGVWFMAAIVCYLIIPKPGIALLAEFAAGAGETIIMGRFDIPTIVYAFIQGLACELVFAIFKYQSRSVMVAMLAGFCTAIAAFPIDYFYGYLNEVAGWNLTLFIVFRLISGAVVAGVLSYLLVKALDKTGVTKLFRPAAKEDYDNL
>NZ_CP047849.1|WP_000921968.1|983117_984518_+|ABC-transporter-ATP-binding-protein
MLKVSDLRLKYPSGQRKIFDHLNITIQDKEKVLLLGPSGCGKSTLLNVLSGIVPNLIELPMKYDELIVDPLSGVIFQDPDSQFCMPKVYEELAFVLENRQLPREDMDALIINALNMVNLNVTPETYIKDLSGGMKQKLAIVETILQQSKTLFLDEPTAMLDVQATEDLWTKLIELWEDQTVVIVEHKVKHIWNHVDRVILMDYNGNIIADECPEIILQKYVHLLSEYGVWHPRAWEFAPSRVDFPTTNSHLLQFKNGRIIRGKSTLLSFSDLEIGLGEWITITGANGSGKTTLLESIMQLIKYQGDVYFENQRLTKIKHAAKHMYLVYQNPELQFITNSVYDEINIHFNHLSKDQSDDETIQLLKLLDLQNVKDQHPYELSIGQKRRLSVATALSSKADIIFLDEPTFGLDSHNTFQLIKLFQKRINLGQSIVMVTHDDEIIERYPSRRLKISDGALLDCDGDTNV
>NZ_CP047849.1|WP_000273253.1|984510_985317_+|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MYEQWKVRQSFVDDVNIITKLFLGIILFFFIIFVHNFDFMLYITILMLVFLLMFNGTQFKITAIFITISIGFALLSSLFMILYGNGSHTILKFGFIHITTESLVRGLHVSLRTIAISFFGILIALTSQVVMIFYSLMQHLKVKSKVAYAFMAAIRMIPLMISSLIQLRRSLKMRYQMIDAANYRGLKRFKHLIIPLLSQNIRKAHQLSVAMESKGFRDGPRTYYYNVPFSYKDIIFIIVLIAIITMAYYCSITLPITGIDDVRLGRVG
>NZ_CP047849.1|WP_001101908.1|985581_986829_-|phosphoribosylamine--glycine-ligase
MNVLVIGAGGREHALAYKLNQSNLVKQVFVIPGNEAMTPIAEVHTEISESDHQAILDFAKRQNVDWVVIGPEQPLIDGLADILRANGFKVFGPNKQAAQIEGSKLFAKKIMEKYNIPTADYKEVERKKDALTYIENCELPVVVKKDGLAAGKGVIIADTIEAARSAIEIMYGDEEEGTVVFETFLEGEEFSLMTFVNGDLAVPFDCIAQDHKRAFDHDEGPNTGGMGAYCPVPHISDDVLKLTNETIAQPIAKAMLNEGYQFFGVLYIGAILTKDGPKVIEFNARFGDPEAQVLLSRMESDLMQHIIDLDEGKRTEFKWKNESIVGVMLASKGYPDAYEKGHKVSGFDLNENYFVSGLKKQGDTFVTSGGRVILAIGKGDNVQDAQRDAYKKVSQIQSDHLFYRHDIANKALQLK
>NZ_CP047849.1|WP_000709290.1|986850_988329_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MKKAILSVSNKTGIVEFAKALTQLNYELYSTGGTKRILDEANVPVRSVSDLTHFPEIMDGRVKTLHPAVHGGILADRNKPQHLNELSEQHIDLIDMVVVNLYPFQQTVANPDVTMDEAIENIDIGGPTMLRAAAKNYKHVTTIVHPADYQEVLTRLRNDSLDESYRQSLMIKVFEHTAEYDEAIVRFFKGDKETLRYGENPQQSAYFVRTSNAKHTIAGAKQLHGKQLSYNNIKDADATLALVKKFDTPATVAVKHMNPCGVGIGDTIEQAFQHAYEADSQSIFGGIVALNRAVTPELAEQLHSIFLEVIIAPKFTDEALDILKQKKNVRLLEIDMTIDSNEEEFVSVSGGYLVQDKDNYVVPKEEMKVVTEVAPTDEQWEAMLLGWKVVPSVKSNAIILSNNKQTVGIGAGQMNRVGAAKIALERAIEINDHVALVSDGFFPMGDTVELAAQHGIKAIIQPGGSIKDQDSIDMANKHGIAMVVTGTRHFKH
>NZ_CP047849.1|WP_000238664.1|988343_988910_-|phosphoribosylglycinamide-formyltransferase
MVKIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQNAFCIDRAKKHDIPVYINEPKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKGIDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQRKCDIRPDDSKEQLEEKVKKLEYELYPSVIAKIVK
>NZ_CP047849.1|WP_000030812.1|988912_989941_-|phosphoribosylformylglycinamidine-cyclo-ligase
MSKAYEQSGVNIHAGYEAVERMSSHVKRTMRKEVIGGLGGFGATFDLSQLNMTAPVLVSGTDGVGTKLKLAIDYGKHDSIGIDAVAMCVNDILTTGAEPLYFLDYIATNKVVPEVIEQIVKGISDACVETNTALIGGETAEMGEMYHEGEYDVAGFAVGAVEKDDYVDGSEVKEGQVVIGLASSGIHSNGYSLVRKLINESGIDLASNFDNRPFIDVFLEPTKLYVKPVLALKKEVSIKAMNHITGGGFYENIPRALPAGYAARIDTTSFPTPKIFDWLQQQGNIDTNEMYNIFNMGIGYTVIVDEKDVSRALKILAEQNVEAYQIGHIVKNESTAIELLGV
>NZ_CP047849.1|WP_000483713.1|989933_991418_-|amidophosphoribosyltransferase
MFNYSGLNEECGVFGIWNHPEAAQLTYMGLHSLQHRGQEGAGIVVSDQNELKGERGLGLLTEAIKDDQMERLKGYQHAIGHVRYATSGNKGIENIQPFLYHFYDMSVGICHNGNLINAKSLRQNLEKQGAIFHSSSDTEVIMHLIRRSKAPTFEEALKESLRKVKGGFTFAILTKDALYGAVDPNAIRPLVVGKMKDGTYILASETCAIDVLGAEFVQDIHAGEYVVINDKGITVKSYTHHTTTAISAMEYIYFARPDSTIAGKNVHAVRKASGKKLAQESPVNADMVIGVPNSSLSAASGYAEEIGLPYEMGLVKNQYVARTFIQPTQELREQGVRVKLSAVKDIVDGKNIILVDDSIVRGTTIRRIVKMLKDSGANKVHVRIASPEFMFPSFYGIDVSTTAELISASKSPEEIKDYIGADSLAYLSVDGLIESIGLDYDAPYSGLCVESFTGDYPAGLYDYEANYKAHLSHRQKQYISKNKHFFDSEGNLNV
>NZ_CP047849.1|WP_000032728.1|991396_993586_-|phosphoribosylformylglycinamidine-synthase-subunit-PurL
MSKFIEPSVEEIKLEKVYQDMGLSDQEYEKVCDILGRQPNFTETGIFSVMWSEHCSYKHSKPFLKQFPTSGDHVLMGPGEGAGVVDIGDNQAVVFKVESHNHPSAIEPYQGAATGVGGIIRDIVSIGARPINLLNSLRFGELDNKQNQRLLKGVVKGIGGYGNCIGIPTTAGEIEFDERYDGNPLVNAMCVGVINHDMIQKGTAKGVGNSVIYVGLKTGRDGIHGATFASEELTEESESKRPSVQIGDPFVGKKLMEATLEAITFDELVGIQDMGAAGLTSSSSEMAAKGGSGLHLRLEQVPTREPGISPYEMMLSETQERMLLVVEKGTEQKFLDLFDKHELDSAVIGEVTDTNRFVLTYDDEVYADIPVEPLADEAPVYILEGEEKDYNTSKNDYTHIDVKDTFFKLLKHPTIASKHYLYDQYDQQVGANTIIKPGLQASVVRVEGTNKAIASTIDGEARYVYNNPYEGGKMVVAEAYRNLIAVGATPLAMTDCLNYGSPEKKEIYQQLIDSTKGMAEACDILKTPVVSGNVSLYNETKGTSIFPTPVVGMVGLIENVNYLNDFEPQVGDKLYLIGDTKDDFGGSQLEKLIYGKVNHEFESLDLSSEVEKGESIKTAIREGLLSHVQTVGKGGLLITLAKLSAHYGLGLKSSIDITNAQLFSETQGRYVVSVKSSKTLNIDNAIEIGLLTDSDNFKVTTPYTEISENVSDIKQIWEGAIAQCLTTQD
>NZ_CP047849.1|WP_000666799.1|993578_994250_-|phosphoribosylformylglycinamidine-synthase-subunit-PurQ
MKFAVLVFPGSNCDRDMFNAAIKSGVEAEYVDYRETSLSGFDGVLIPGGFSFGDYLRSGAMASVAPIISEVKRLAAEGKPVLGVCNGFQILTEIGLLPGALLHNDSHLFISRNEELEIVNNQTAFTNLYEQGEKVIYPVAHGEGHYYCTDEIYQQLKANNQIILKYVNNPNGSYDDIAGIVNEKGNVCGMMPHPERALETLLGTDSGVKLFEAMVKSWREQHV

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Crispr_ID: NZ_CP047849_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_2

1115443-1115751

Orphan

Consensus_repeat	Method
CCAACTTGCANNNTNTNNNNAGCTGNCTTT	CRT
CCAGCCTCTGTGTTGGGGCCCCG	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP047849_2

>merge|NZ_CP047849|2|1115443-1115751|CRT,CRISPRCasFinder
CCAAATTGAAATTATCCTACTGCTGTCTTTTTGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACCCCAACTTGCACACTATTGTAAGCTGACTTTTCGCCAGCTTCTGTGTTGGGGCCCCGCCAACTTGCATTGTCTGTAGAAATTGAGGAGCTAATTTCTCTGTGTCGGGGCTCCACCCCAACTTGCACACTATTGTAAGCTGACTTTCCGCCAGCCTCTGTGTTGGGGCCCCGCCAACTTGCACACTATTGTAAGCTGACTTTCCACCAGCCTCTGTGTTGGGGCCCCG

>NZ_CP047849|2|1|1115443-1115725|CRT
CCAAATTGAAATTATCCTACTGCTGTCTTT	TTGGGAGTGGGACAGAAATGATATTTTCGCAAAATTTATTTCGTCGTCCCACC
CCAACTTGCACACTATTGTAAGCTGACTTT	TCGCCAGCTTCTGTGTTGGGGCCCCG
CCAACTTGCATTGTCTGTAGAAATTGAGGA	GCTAATTTCTCTGTGTCGGGGCTCCACC
CCAACTTGCACACTATTGTAAGCTGACTTT	CCGCCAGCCTCTGTGTTGGGGCCCCG
CCAACTTGCACACTATTGTAAGCTGACTTT

>NZ_CP047849|2|2|1115673-1115751|CRISPRCasFinder
CCAGCCTCTGTGTTGGGGCCCCG	CCAACTTGCACACTATTGTAAGCTGACTTTCCA
CCAGCCTCTGTGTTGGGGCCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000185326.1\|1114443_1115373_+\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176543
NZ_CP047849.1\|WP_000711486.1\|1107925_1108501_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP047849.1\|WP_160203733.1\|1115875_1117120_-\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_CP047849.1\|WP_011443624.1\|1125017_1125347_+\|Na(+)/H(+)-antiporter-subunit-C	unknown	unknown	gnl\|CDD\|181497
NZ_CP047849.1\|WP_000035058.1\|1121008_1121602_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|238908
NZ_CP047849.1\|WP_160203734.1\|1124577_1125006_+\|Na(+)/H(+)-antiporter-subunit-B	unknown	unknown	gnl\|CDD\|183602
NZ_CP047849.1\|WP_000007967.1\|1109045_1109621_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP047849.1\|WP_000148855.1\|1109945_1111277_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP047849.1\|WP_000670752.1\|1099567_1100470_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP047849.1\|WP_000781155.1\|1121665_1122049_+\|kinase	unknown	unknown	gnl\|CDD\|378054
NZ_CP047849.1\|WP_000066053.1\|1112822_1114202_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP047849.1\|WP_000573073.1\|1125339_1126836_+\|Na+/H+-antiporter-subunit-D	unknown	unknown	gnl\|CDD\|181085
NZ_CP047849.1\|WP_000758215.1\|1108516_1109041_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP047849.1\|WP_160203732.1\|1100635_1104289_-\|helicase-exonuclease-AddAB-subunit-AddA	unknown	unknown	gnl\|CDD\|274299
NZ_CP047849.1\|WP_001067294.1\|1120215_1120593_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224023
NZ_CP047849.1\|WP_000838037.1\|1118726_1119854_-\|NADH-dependent-flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240086
NZ_CP047849.1\|WP_000172342.1\|1104289_1107766_-\|helicase-exonuclease-AddAB-subunit-AddB	unknown	unknown	gnl\|CDD\|213736
NZ_CP047849.1\|WP_000054609.1\|1122179_1124585_+\|Na+/H+-antiporter-subunit-A	unknown	unknown	gnl\|CDD\|237155
NZ_CP047849.1\|WP_000660045.1\|1111627_1112833_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP047849.1\|WP_000167314.1\|1117228_1118419_-\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000185326.1\|1114443_1115373_+\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176543	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.	3.10889e-150
NZ_CP047849.1\|WP_000711486.1\|1107925_1108501_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	4.05406e-53
NZ_CP047849.1\|WP_160203733.1\|1115875_1117120_-\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP047849.1\|WP_011443624.1\|1125017_1125347_+\|Na(+)/H(+)-antiporter-subunit-C	gnl\|CDD\|181497	PRK08600, PRK08600, putative monovalent cation/H+ antiporter subunit C; Reviewed.	3.20641e-61
NZ_CP047849.1\|WP_000035058.1\|1121008_1121602_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|238908	cd01927, cyclophilin_WD40, cyclophilin_WD40: cyclophilin-type peptidylprolyl cis- trans isomerases (cyclophilins) having a WD40 domain. This group consists of several hypothetical and putative eukaryotic and bacterial proteins which have a cyclophilin domain and a WD40 domain. Function of the protein is not known.	3.93388e-65
NZ_CP047849.1\|WP_160203734.1\|1124577_1125006_+\|Na(+)/H(+)-antiporter-subunit-B	gnl\|CDD\|183602	PRK12573, PRK12573, Na(+)/H(+) antiporter subunit B.	3.42729e-60
NZ_CP047849.1\|WP_000007967.1\|1109045_1109621_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	1.01759e-40
NZ_CP047849.1\|WP_000148855.1\|1109945_1111277_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP047849.1\|WP_000670752.1\|1099567_1100470_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.0042e-87
NZ_CP047849.1\|WP_000781155.1\|1121665_1122049_+\|kinase	gnl\|CDD\|378054	pfam08810, KapB, Kinase associated protein B. This bacterial protein forms an anti-parallel beta sheet with an extending alpha helical region.	1.00806e-51
NZ_CP047849.1\|WP_000066053.1\|1112822_1114202_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP047849.1\|WP_000573073.1\|1125339_1126836_+\|Na+/H+-antiporter-subunit-D	gnl\|CDD\|181085	PRK07691, PRK07691, putative monovalent cation/H+ antiporter subunit D; Reviewed.	0
NZ_CP047849.1\|WP_000758215.1\|1108516_1109041_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.63848e-48
NZ_CP047849.1\|WP_160203732.1\|1100635_1104289_-\|helicase-exonuclease-AddAB-subunit-AddA	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047849.1\|WP_001067294.1\|1120215_1120593_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|224023	COG1098, VacB, Predicted RNA binding protein (contains ribosomal protein S1 domain) [Translation, ribosomal structure and biogenesis].	3.22125e-44
NZ_CP047849.1\|WP_000838037.1\|1118726_1119854_-\|NADH-dependent-flavin-oxidoreductase	gnl\|CDD\|240086	cd04735, OYE_like_4_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 4. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP047849.1\|WP_000172342.1\|1104289_1107766_-\|helicase-exonuclease-AddAB-subunit-AddB	gnl\|CDD\|213736	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RexAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. Nevertheless, the partner is designated AddB in both systems. This model describes the AddB protein as found Bacillus subtilis and related species. Although the RexB protein of Streptococcus and Lactococcus is considered to be orthologous, functionally equivalent, and merely named differently, all members of this protein family have a P-loop nucleotide binding motif GxxGxGK[ST] at the N-terminus, unlike RexB proteins, and a CxxCxxxxxC motif at the C-terminus, both of which may be relevant to function. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP047849.1\|WP_000054609.1\|1122179_1124585_+\|Na+/H+-antiporter-subunit-A	gnl\|CDD\|237155	PRK12645, PRK12645, monovalent cation/H+ antiporter subunit A; Reviewed.	0
NZ_CP047849.1\|WP_000660045.1\|1111627_1112833_+\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP047849.1\|WP_000167314.1\|1117228_1118419_-\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0

>NZ_CP047849.1|WP_000185326.1|1114443_1115373_+|glycerophosphodiester-phosphodiesterase
MTNSSKSFTKFMAASAVFTMGFLSVPTAGAEQTNQIANKPQAIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKVEDYTLDELKQLDAGSWFNKKYPKYARASYKNAKVPTLDEILERYGPNANYYIETKSSDVYPGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPLVKLVDKGELQQFNDQRLKEIRSYAIGLGPDYTDLTEQNTHHLKDLGFIVHPYTVNEKADMLRLNKYGVDGVFTNFADKYKEVIK
>NZ_CP047849.1|WP_000066053.1|1112822_1114202_+|argininosuccinate-lyase
MSNKAWGGRFEVQPEEWVDDFNASITFDQTLIDQDIEGSIAHATMLANQGIISQQDSEQIIQGLKSIQHDYHQDQIQFSASLEDIHLNIEHELIKRIGDAGGKLHTGRSRNDQVATDMHLYTKKQVQDIIALIKSLQSVIVDIASNNVDTIMPGYTHLQRAQPISFAHHIMTYFWMLQRDQQRFEDSLKRIDINPLGAAALSGTTYPIDRHETTALLNFGSLYENSLDAVSDRDYIIETLHNISLTMVHLSRFAEEIIFWSTDEAKFITLSDAFSTGSSIMPQKKNPDMAELIRGKVGRTTGHLMSMLMTLKGLPLAYNKDMQEDKEGLFDAVHTIKGSLRIFEGMIQTMTINKERLNQTVKEDFSNATELADYLVTKNIPFRTAHEIVGKIVLECIQQGHYLLDVPLATYQQHHSSIDADIYDYLQPENCLKRRQSYGSTGQSSVKQQLDVAKQLLSQ
>NZ_CP047849.1|WP_000660045.1|1111627_1112833_+|argininosuccinate-synthase
MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDIVYKKALDMGAVECHIIDATKEFSDEYVSYAIKGNLMYENAYPLVSALSRPLIAKKLVEIAEKTNSVGIAHGCTGKGNDQVRFEVAIKALNPSLKAFAPVREWAWSREEEIDYAIKHNIPVSINHDSPYSIDQNLWGRANECGILEDPYAAPPEDAFDLTNALEETPDTADEIILTFDKGIPVQIDGKTYELDDLILTLNALAGKHGIGRIDHVENRLVGIKSREIYEAPAAEVILKAHKALETITLTKDVAHFKPIIEKQFAEQLYNGLWFSPLTDSLKLFIDSTQQYVSGDVRIKLFKGNAIVNGRKSPYTLYDEKLATYTKEDAFNQDAAVGFIDIYGLPTQVNAMLHGGYSNEQ
>NZ_CP047849.1|WP_000148855.1|1109945_1111277_-|glucose-6-phosphate-isomerase
MTHIQLDFSKTLEFFGEHELKQQQEIVKSIHKTIHEGTGAGSDFLGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIGIGGSYLGARAAIEMLTSSFRNSNEYPEIVFVGNHLSSTYTKELVDYLADKDFSVNVISKSGTTTEPAVAFRLFKQLVEERYGKEEAQKRIFATTDKEKGALKQLATNEGYETFIVPDDVGGRYSVLTAVGLLPIATAGINIEAMMIGAAKAREELSSDKLEENIAYQYATIRNILYAKGYTTEMLINYEPSMQYFNEWWKQLFGESEGKDFKGIYPSSANYTTDLHSLGQYVQEGRRFLFETVVKVNHPKYDITIEKDSDDLDGLNYLAGKTIDEVNTKAFEGTLLAHTDGGVPNMVVNIPQLDEETFGYVVYFFELACAMSGYQLGVNPFNQPGVEAYKQNMFALLGKPGFEDLKKELEERL
>NZ_CP047849.1|WP_000007967.1|1109045_1109621_-|TVP38/TMEM64-family-protein
MSFHQVEEWFEIFRQFGYLPGFILLYIRAIIPVFPLALYILINIQAYGPILGILISWLGLISGTFTVYLICKRLVNTERMQRIKQRTAVQRLISFIDRQGLIPLFILLCFPFTPNTLINFVASLSHIRPKYYFIVLASSKLVSTIILGYLGKEITTILTHPLRGILMLVVLVVFWIVGKKLEQHFMGSKKE
>NZ_CP047849.1|WP_000758215.1|1108516_1109041_-|signal-peptidase-I
MKKVVKYLISLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRGNEIYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFVVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSKWTVQFKS
>NZ_CP047849.1|WP_000711486.1|1107925_1108501_-|signal-peptidase-I
MKKEILEWIISIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHANKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSEFKHNFNPENTKN
>NZ_CP047849.1|WP_000172342.1|1104289_1107766_-|helicase-exonuclease-AddAB-subunit-AddB
MTLHAYLGRAGTGKSTKMLTEIKQKMKADPLGDPIILIAPTQSTFQLEQAFVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIVQEQQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQTRTKNKLEDIALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADIYIDGFHNFSTIEYLIIKGLIKYAKSVTIILTTDGNHDQFSLFRKPSEVLRHIEEIANELNISIERQYFNQLYRFNNQDLKHLEQEFDALQINRVACQGHINILESATMREEINEIARRIIVDIRDKQLRYQDIAILYRDESYAYLFDSILPLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLRLLKTDVLTASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTEDERNTFEQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELPNQLMTERDELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERFLEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMPQPVTASSLITDEEKKYFEQQANVELSPTSDILQMDEAFVCYVAMTRAKGDVTFSYSLMGSSGDDKEISPFLNQIQSLFNQLEITNIPQYHEVNPLSLMQHAKQTKITLFEALRAWLYDEIVADSWLDAYQVIRDSDHLNQGLDYLMSALTFDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNERTKYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPKVQFNLLNSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRRKPRTNDELIAQTLTTTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSEGSATLDLTKVYYGMQMQMMTYMDIVLQNKQRLGLTDIVKPGGLLYFHVHEPRIKFKSWSDIDEDKLEQDLIKKFKLSGLVNADQTVIDALDIRLEPKFTSDIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFIETASNIMDGHTEVAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQNININDEFGGEQ
>NZ_CP047849.1|WP_160203732.1|1100635_1104289_-|helicase-exonuclease-AddAB-subunit-AddA
MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVERIIQKILRDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKIHQAQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIEQHYDILDPAFIELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQLVTPYEEEAQQAQLIQLLTDLSKVFITAAYDALNKAYDLFSMMDSVDKHLAVIEDERRLMGRVLEGGFIDIPYLTGHEFGARLPNVTAKIKEANEMMVDALEDAKLQYKKYKSLIDKVKSDYFSREADDLKADMQQLAPRVKYLARIVKDVMSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYRQHFQEILVDEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYDEAAQLYYGAPYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDILEHQKVYDMKTGSYRSATYKDIVILERSFGQARNLQQAFKNEDIPFHVNSREGYFEQTEVRLVLSFLRAIDNPLQDIYLVGLMRSVIYQFKEDELAQIRILSPNDDYFYQSIVNYINDEAADAILVDKLKMFLSDIQSYQQYSKDHPVYQLIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLSKDFNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYRAVAEKELVSEEMRLAYVALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSPNPFHLIYSILSKHQSASIPDDLKFEKDIAQIEDSSRPNVNISIVYFEDVSTETILDNDEYRSVNQLETMQNGNEDVKAQIKHQLDYRYPYVNDTKKPSKQSVSELKRQYETEESGTSYERVRQYRIGFSTYERPKFLSEQGKRKANEIGTLMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADAKKDIRMDEIMTFINSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMIDLIFVKDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILNKEVKGYLYFFKFGTLQL
>NZ_CP047849.1|WP_000670752.1|1099567_1100470_-|fumarylacetoacetate-hydrolase-family-protein
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILKIDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK
>NZ_CP047849.1|WP_160203733.1|1115875_1117120_-|Glu/Leu/Phe/Val-dehydrogenase
MTENNNLVTSTQGIIKEALHKLGFDEGMYDLIKEPLRMLQVRIPVRMDDGTVKTFTGYRAQHNDAVGPTKGGVRFHPDVDEEEVKALSMWMTLKCGIVNLPYGGGKGGIVCDPRQMSIHEVERLSRGYVRAISQFVGPNKDIPAPDVFTNSQIMAWMMDEYSALDKFNSPGFITGKPIVLGGSHGRDRSTALGVVIAIEQAAKRRNMQIEGAKVVIQGFGNAGSFLAKFLYDLGAKIVGISDAYGALHDPNGLDIDYLLDRRDSFGTVTNLFEETISNKELFELDYDILVPAAISNQITEDNAHDIKASIVVEAANGPTTPEATRILTERGILLVPDVLASAGGVTVSYFEWVQNNQGYYWSEEEVNEKLREKLEAAFDTIYELSQNRKIDMRLAAYIIGIKRTAEAARYRGWA
>NZ_CP047849.1|WP_000167314.1|1117228_1118419_-|ornithine--oxo-acid-transaminase
MTKSEKIIELTNHYGAHNYLPLPIVISEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLVSRAFHSDNLGEWYEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLDGFRKVDFGDVDALKAAINENTAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHPSIKEVRGRGLFIGVELNESARPYCEALKEEGLLCKETHDTVIRFAPPLIITKEELDLALEKIRHVFQ
>NZ_CP047849.1|WP_000838037.1|1118726_1119854_-|NADH-dependent-flavin-oxidoreductase
MKSKYEPLFDKVELPNGVELRNRFVLAPLTHISSNDDGTISDVELPYIEKRSQDVGITINAASNVSDVGKAFPGQPSIAHDSNIEGLKRLATAMKKNGAKALVQIHHGGAQALPELTPDGDVVAPSPISLKSFGQKQEHSAREMTNEEIEQAIKDFGEATRRAIEAGFDGVEIHGANHYLIHQFVSPYYNRRNDVWANQYKFPVAVIEEVLKAKEAYGNKDFIVGYRLSPEEAESPGITMEITEELVNKISHMPIDYIHVSMMDTHATTREGKYAGQERLPLIHKWINGRMPLIGIGSIFTADEALDAVENVGVDLVAIGRELLLDYQFVEKIKDGREDEIINYFDPEREDNHHLTPNLWHQFNEGFYPLPRKDK
>NZ_CP047849.1|WP_001067294.1|1120215_1120593_-|S1-RNA-binding-domain-containing-protein
MNNYKIGQHIKVRVTGIQPYGAFVETPNHTEGLIHISEIMDDYVHNLKKFLSEGQIVKAKILSIDDEGKLNLSLKDNDYFKNYERKKEKQSVLDEIRETEKYGFQTLKERLPIWIKQSKRAIRND
>NZ_CP047849.1|WP_000035058.1|1121008_1121602_-|peptidyl-prolyl-cis-trans-isomerase
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
>NZ_CP047849.1|WP_000781155.1|1121665_1122049_+|kinase
MKLYRFSHKTGSYGVTIVEENGDDVLVKVEQVIKHPKQGDLHNPTETEGVFFHDRKALSHFEKRYTKRSQLRDFNVDVLRYEDSLQQAITDLETKIKAQQTKHAEMSLASLARLKEDYSLQYKENFK
>NZ_CP047849.1|WP_000054609.1|1122179_1124585_+|Na+/H+-antiporter-subunit-A
MSLLHIAVILPLIFALIIPILYRFFKRIHLGWFVLPVPIVIFIYMLTLIKTTMSGNTVMKTLNWMPHFGMNFDLYLDGLGLLFSLLISGIGSLVVLYSIGYLSKSEQLGNFYCYLLLFMGAMLGVVLSDNVIILYLFWELTSFSSFLLISFWRERQASIYGAQKSLIITVFGGLSLLGGIILLAIPTQSFSIQYMIQHASEIQNSPFFIFAMILIMIGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGLYLIARMTPIFAASQGWVWTVTLVGLITLFWASLNATKQQDLKGILAFSTVSQLGMIMAMLGIGAISYHYQGDDSKIYAAAFTAAIFHLINHATFKGALFMITGAVDHSTGTRDVKKLGGLLTIMPISFTITVITALSMAGVPPFNGFLSKESFLETTFTASQANLFSVDTLGYLFPIIGIVGSVFTFVYSIKFIMHIFFGQYKPEQLPKKAHEVSILMLLSPAILATLVIVFGLFPGILTNSIIEPATSSINHTVIDDVEFHMFHGLTPAFLSTLVIYILGILLIVTFSYWVKLLQRQPGKLTFNYWYNRSANVIPNYSEKMTNSYVTDYSRNNLVIIFGALILLTFVTIFSVPFNINFKDVSPIRIFEVCIVILLLSAAFLILFAKSRLFSIIMLSAVGYAVSVLFIFFKAPDLALTQFVVESISTALFLLCFYHLPNLNRYNEKRSFQLTNALIAGGVGLSVIIIGLIAYGNRHFESISKFYQEHVYDLAHGKNMVNVILVDFRGMDTLFESSVLGIAGLAVYTMIKLRKKRQTQGNEVKNHE
>NZ_CP047849.1|WP_160203734.1|1124577_1125006_+|Na(+)/H(+)-antiporter-subunit-B
MNRQQNDLILQFAAVIIFFMVMVFGFSLFLAGHYTPGGGFVGGLLFASSLVIITIAFDIETMRKIFPLDFKILIGIGSVFCIATPIASWFLGKNFFTHVTFDIPLFILEPVHMTTAVFFDFGVLCAVVGTVMTIIISIGENE
>NZ_CP047849.1|WP_011443624.1|1125017_1125347_+|Na(+)/H(+)-antiporter-subunit-C
MIFVSGILTAISVYLVLSKSLIRIVMGTTLLTHAANLFLITMGGLKHGTVPIYEANVKSYVDPIPQALILTAIVIAFATTAFFLVLAFRTYKELGTDNVESMKGVPEDD
>NZ_CP047849.1|WP_000573073.1|1125339_1126836_+|Na+/H+-antiporter-subunit-D
MIESNMLVLTLVIPVITAILLVFIGKRPIIKRYVALGGTLLTLVAAIINLANVVKHGPIRVELGSWKAPYSIVFVLDIFSALLIITSIIITAIVILYSYQTIGIERERYYYYFSVLFMLIGIIGAFTTGDIFNLFVFFEVFLMSSYFLLVIGSTKIQLQETIKYVLVNVVSSSFFVMGVAILYSVVGTLNLADISNKLANLSAHDSGLVNIVFILFIFVFATKAGVFPMFVWLPSAYYAPPIPIIAFFGALLTKVGVYAIARTLSLFFSDNVSFSHYVILFLALLTIIFGCVGAVAYANIKKIILYNVMIAVGVILVGIAMMTESGMIGAIYYTLHDMLVKLALFLLIGIMIKITGTADLRQFGGLIKRYPVLGWSFFIAALSLAGIPPLSGFYGKFFIVQSTFERGFYLSGVIVLLSSLVVLYSVIRIFLQGFFGQPKGYDLNNKVDVKYLTTIAIVAVVITVLYGLSADYLYPMVKAGAETFYNPSTYVKAVLGGK

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Crispr_ID: NZ_CP047849_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_3

1164499-1164580

Orphan

Consensus_repeat	Method
TTCTACAGGCAATGCAAGTTGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047849_3

>merge|NZ_CP047849|3|1164499-1164580|CRISPRCasFinder
TTCTACAGGCAATGCAAGTTGGGGATGGGCCCCAACAAAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGGG

>NZ_CP047849|3|3|1164499-1164580|CRISPRCasFinder
TTCTACAGGCAATGCAAGTTGGGG	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT
TTCTACAGACAATGCAAGTTGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000520233.1\|1161303_1161999_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP047849.1\|WP_000422908.1\|1167243_1167783_-\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_CP047849.1\|WP_001183858.1\|1158832_1159684_+\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_CP047849.1\|WP_001065801.1\|1163266_1163563_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP047849.1\|WP_160203736.1\|1160464_1161286_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP047849.1\|WP_000205572.1\|1156338_1157646_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP047849.1\|WP_001018962.1\|1163555_1163942_-\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_CP047849.1\|WP_000150017.1\|1167865_1168582_-\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_CP047849.1\|WP_000807671.1\|1154982_1156224_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP047849.1\|WP_000974460.1\|1168729_1169152_+\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_CP047849.1\|WP_001802951.1\|1170889_1171450_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP047849.1\|WP_001190695.1\|1166773_1167094_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP047849.1\|WP_000168845.1\|1157743_1158505_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP047849.1\|WP_000589549.1\|1166273_1166630_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP047849.1\|WP_000569884.1\|1169550_1170045_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_CP047849.1\|WP_000571218.1\|1161991_1163017_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP047849.1\|WP_000660172.1\|1165558_1165672_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000290485.1\|1165735_1166116_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP047849.1\|WP_000752917.1\|1159916_1160111_-\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_CP047849.1\|WP_000255561.1\|1170199_1170817_+\|amino-acid-transporter	unknown	unknown	gnl\|CDD\|224198

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000520233.1\|1161303_1161999_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	9.67625e-100
NZ_CP047849.1\|WP_000422908.1\|1167243_1167783_-\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	2.10032e-49
NZ_CP047849.1\|WP_001183858.1\|1158832_1159684_+\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	4.58436e-76
NZ_CP047849.1\|WP_001065801.1\|1163266_1163563_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	7.01368e-14
NZ_CP047849.1\|WP_160203736.1\|1160464_1161286_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	5.38143e-112
NZ_CP047849.1\|WP_000205572.1\|1156338_1157646_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	8.11734e-136
NZ_CP047849.1\|WP_001018962.1\|1163555_1163942_-\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	2.45102e-36
NZ_CP047849.1\|WP_000150017.1\|1167865_1168582_-\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.26721e-148
NZ_CP047849.1\|WP_000807671.1\|1154982_1156224_-\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP047849.1\|WP_000974460.1\|1168729_1169152_+\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	5.58225e-61
NZ_CP047849.1\|WP_001802951.1\|1170889_1171450_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	7.9429e-44
NZ_CP047849.1\|WP_001190695.1\|1166773_1167094_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.70086e-24
NZ_CP047849.1\|WP_000168845.1\|1157743_1158505_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.29081e-150
NZ_CP047849.1\|WP_000589549.1\|1166273_1166630_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.06191e-56
NZ_CP047849.1\|WP_000569884.1\|1169550_1170045_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	2.53639e-47
NZ_CP047849.1\|WP_000571218.1\|1161991_1163017_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	3.37873e-170
NZ_CP047849.1\|WP_000290485.1\|1165735_1166116_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	2.81086e-68
NZ_CP047849.1\|WP_000752917.1\|1159916_1160111_-\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	5.95583e-07
NZ_CP047849.1\|WP_000255561.1\|1170199_1170817_+\|amino-acid-transporter	gnl\|CDD\|224198	COG1279, COG1279, Lysine efflux permease [General function prediction only].	9.12336e-62

>NZ_CP047849.1|WP_001018962.1|1163555_1163942_-|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
>NZ_CP047849.1|WP_001065801.1|1163266_1163563_-|thioredoxin-family-protein
MNNSLDIKDVTTFYEEDKHLIFGYTPTCGTCKVSERMLDIANEILQLPLLKIDLNFYPQFCKDMQIMSTPILLLMNKDKEVKRIYAFKSVTDLLENLK
>NZ_CP047849.1|WP_000571218.1|1161991_1163017_-|methionine-ABC-transporter-ATP-binding-protein
MIELKEVVKEYRTKNKEVLAVDHVNLSIRAGSIYGVIGFSGAGKSTLIRMFNHLEAPTSGEVIIDGDHIGQLSKNGLRAKRQKVSMIFQHFNLLWSRTVLKNIMFPLEIAGVPRRRAKQKALELVELVGLKGREKAYPSELSGGQKQRVGIARALANDPTVLLCDEATSALDPQTTDEILDLLLKIREQQNLTIVLITHEMHVIRRICDEVAVMESGKVIEQGPVTQVFENPQHTVTKRFVKDDLNDDFETSLTELEPLEKDAYIVRLVFAGSTTTEPIVSSLSTAYDIKINILEANIKNTKNGTVGFLVLHIPYISSVDFGKFEKELIERQVKMEVLRHG
>NZ_CP047849.1|WP_000520233.1|1161303_1161999_-|ABC-transporter-permease
MGKSFSEIINEMITMPNIQWPEVWTAIVETLYMTVVSTIFAFILGLILGVLLFLSAKGKSIGARLFYSIVSFIVNLFRAIPFIILILLLIPFTSLILGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTWTVIRKVLLPEAMPALVSGITVTAIALVGSTAVAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFIGDWLTNKLDKR
>NZ_CP047849.1|WP_160203736.1|1160464_1161286_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGLILVLTFAVVLAACGNGNKSGSDDKKITVGASPAPHAEILEKAKPLLEKKGYELDIKTINDYTTPNKLLDKGEIDANYFQHTPYLNTEKKDKGYKIVSAGDVHLEPMAVYSKKYKSLKELPKGATVYVSNNPAEQGRFLKFFVDAGLIKIKKGVKIEEAKFSDITENKKDIKFNNKQSAEFLPKIYQNEDADAVIINSNFAIEQKLNPKKDSIAVESAKDNPYANLIAVKEGHQDDKKIKALIEVLQSKDIQDFINEKYNGAVIPAK
>NZ_CP047849.1|WP_000752917.1|1159916_1160111_-|CsbD-family-protein
MADESKFEQAKGNVKETVGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
>NZ_CP047849.1|WP_001183858.1|1158832_1159684_+|DUF368-domain-containing-protein
MQQFKWINILKGFAMGTSDLVPGVSGGTIALLLGIYNQFIASISGIFSRRFWPSFTFLIPIIIGMLLAMGSLSNLFNYLLSQHHIPTMFFFGGLIIGIVPYLLKISNYKTSFTTKHYMMVIAGIAILIVITLMNNGDKHAGETLTLSTSLIIKYFIAGMCASSAMLLPGISGSFMLLVFGVYGTVMLAISEVVKLNFAGLPILLAVGFGVLAGFIISSKIIQYFLTHHKLMTFALIIGFVVGSLFAVFPGLPTNIVMWFVSLVVFIIGFIVSLTLGRITAENE
>NZ_CP047849.1|WP_000168845.1|1157743_1158505_-|Fe-S-cluster-assembly-ATPase-SufC
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEGYEWVKEEFGSAE
>NZ_CP047849.1|WP_000205572.1|1156338_1157646_-|Fe-S-cluster-assembly-protein-SufD
MTTDILNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDSFKQHDVKGDVYQSLSQLPESVREIIDVDHSKNLVIQHNNTIAYTQVDDNASKDGVIVEGLADALMNHSDLVQKYFMKDAVTVDEHRITALHTALVNGGVFVYVPKNVVVEHPVQYVVLHDDENASFYNHVIIVTEESAEVTYVENYLSNASGEGNQLNIISEVIAGANSNITYGSVDYMDKGFTGHIIRRGITEADASINWALGLMNEGSQIIDNTTNLFGDRSTSSLKSVVVGTGEQKINLTSKIVQYGKETDGYILKHGVMKEHASSVFNGIGYIKHGGTKSIANQESRVLMLSEHARGDANPILLIDEDDVQAGHAASVGRVDPDQLYYLMSRGISQREAERLVIHGFLDPVVRELPIEDVKRQLREVIERKVSK
>NZ_CP047849.1|WP_000807671.1|1154982_1156224_-|cysteine-desulfurase
MAEHSFDVNEVIKDFPILDQKVNGKRLAYLDSTATSQTPVQVLNVLEDYYKRYNSNVHRGVHTLGSLATDGYENARETVRRFINAKYFEEIIFTRGTTASINLVAHSYGDANVEEGDEIVVTEMEHHANIVPWQQLAKRKNATLKFIPMTADGELNIEDIKQTINDKTKIVAIAHISNVLGTINDVKTIAEIAHQHGAIISVDGAQAAPHMKLDMQEMNADFYSFSGHKMLGPTGIGVLFGKRELLQKMEPIEFGGDMIDFVSKYDATWADLPTKFEAGTPLIAQAIGLAEAIRYLERIGFDAIHKYEQELTIYAYEQMSAIEGIEIYGPPKDRRAGVITFNLQDVHPHDVATAVDTEGVAVRAGHHCAQPLMKWLNVSSTARASFYIYNTKEDVDQLINALKQTKEFFSYEF
>NZ_CP047849.1|WP_000660172.1|1165558_1165672_-|hypothetical-protein
MKEKLLGTIIWSIATFYYSRMMEIMNLAILKIKIGGS
>NZ_CP047849.1|WP_000290485.1|1165735_1166116_-|glycine-cleavage-system-protein-GcvH
MAVPNELKYSKEHEWVKVEGNVAIIGITEYAQSELGDIVFVELPETDDEINEGDTFGSVESVKTVSELYAPISGKVVEVNEELEDSPEFVNESPYEKAWMVKVEISDESQIEALLTAEKYSEMIGE
>NZ_CP047849.1|WP_000589549.1|1166273_1166630_-|arsenate-reductase-family-protein
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA
>NZ_CP047849.1|WP_001190695.1|1166773_1167094_+|thioredoxin-family-protein
MQSIKSNESFKSVINSDTPVIVKFEAGWCPDCRAMDLWIDPIVEQYNDYQWYTVNRDELEDVVVENEVMGIPSLLVFKNGDKIAHLHSANAKSPEQVESFLAETFK
>NZ_CP047849.1|WP_000422908.1|1167243_1167783_-|nitroreductase
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEEDMPKAPRKNRNLITLY
>NZ_CP047849.1|WP_000150017.1|1167865_1168582_-|type-I-3-dehydroquinate-dehydratase
MTHVEVVATIAPQLSIEETLIQKINHRIDAIDVLELRIDQIENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQADIDIEKHQRIITHLQQYNKEVVISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKLGLISRTAQGVFGGALTYGCIGVPQAPGQIDVTDLKAQVTLY
>NZ_CP047849.1|WP_000974460.1|1168729_1169152_+|organic-hydroperoxide-resistance-protein
MAIHYETKATNVGGRKGHVYTDDRALDIDIVPPAQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAHPEVTLTVRLEDDSDSESPKLSVSIDATIKNVISQEEAEKYLQMAHEFCPYSKATQGNINVDLNVNVVD
>NZ_CP047849.1|WP_000569884.1|1169550_1170045_+|GNAT-family-N-acetyltransferase
MIEIKTLTNNDFNEYKRLVSTVNEEFTQDSHYSQTMTDTLIHDILNQGSPKCIVFGCYENETLIATAALEQIRYVGKEHKSLIKYNFVTNNDKSINSELINFIINYARQNNYESLLTSIVSNNIGAKVFYSALGFDILGFEKNAIKIGNTYFDEHWLFYDLINK
>NZ_CP047849.1|WP_000255561.1|1170199_1170817_+|amino-acid-transporter
MVTAIIHGFILAIGLILPLGAQNVFIFNQGANQPKYRYVLPAIITAGLSDSLLIIIAVVGVSIIIMSLPVLQAIIYIVGLIFLMYMAWTIWHDKPSTDGETQIMSPMKQVSFALSVSLLNPHAILDTIGVIGSSAALYSGSNKIAFTIACISVSWLWFFLLAILGKMVGSIDKTGKLLTIINKISSIIIIIVALMILQKLIQLLF
>NZ_CP047849.1|WP_001802951.1|1170889_1171450_-|histidine-phosphatase-family-protein
MRHGQTLFNFKGLIQGFGDSPLTELGIAQAQKARSYYETKGINFDLYASSTQERASDTLENVAPNQSYQRFKGLKEWHFGIFEGESVYLFDNLYKPEDLFGDRIVPFKGEARQQVEERIVKTLHDIMSQTKNNALVVSHGTIMGVFLRYCLKLDEALKHNIGNCNILKFEYDNGTFKFVELIDPNL

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Crispr_ID: NZ_CP047849_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_4

1212897-1212977

Unclear

Consensus_repeat	Method
AGTTGGCGGGGCCCCAACATAAAGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047849_4

>merge|NZ_CP047849|4|1212897-1212977|CRISPRCasFinder
AGTTGGCGGGGCCCCAACATAAAGAATTTCGAAAAGAAATTCTACAAACAATGCAAGTTGGCGGGGCCCCAACATAAAGAA

>NZ_CP047849|4|4|1212897-1212977|CRISPRCasFinder
AGTTGGCGGGGCCCCAACATAAAGAA	TTTCGAAAAGAAATTCTACAAACAATGCA
AGTTGGCGGGGCCCCAACATAAAGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000958224.1\|1211727_1212660_-\|HPr-kinase/phosphorylase	unknown	unknown	gnl\|CDD\|235459
NZ_CP047849.1\|WP_001790092.1\|1221958_1222063_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000369722.1\|1206147_1207059_-\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|224574
NZ_CP047849.1\|WP_010956549.1\|1220679_1221790_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP047849.1\|WP_001224793.1\|1210389_1210875_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP047849.1\|WP_000506531.1\|1222104_1224636_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP047849.1\|WP_000229253.1\|1216120_1218106_-\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP047849.1\|WP_001790093.1\|1220418_1220526_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000057542.1\|1208942_1210382_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276808
NZ_CP047849.1\|WP_000749380.1\|1219431_1220271_-\|CHAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|226451
NZ_CP047849.1\|WP_000006551.1\|1204101_1205046_-\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194
NZ_CP047849.1\|WP_000513308.1\|1210882_1211722_-\|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl\|CDD\|183527
NZ_CP047849.1\|WP_000638419.1\|1218374_1218611_-\|CsbA-family-protein	unknown	unknown	gnl\|CDD\|227234
NZ_CP047849.1\|WP_000617735.1\|1225049_1225622_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|224461
NZ_CP047849.1\|WP_000538141.1\|1218607_1219258_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378993
NZ_CP047849.1\|WP_000662681.1\|1213266_1216113_-\|excinuclease-ABC-subunit-UvrA	unknown	unknown	gnl\|CDD\|234734
NZ_CP047849.1\|WP_001248939.1\|1205155_1206151_-\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_CP047849.1\|WP_000816295.1\|1201796_1202699_+\|epimerase	unknown	unknown	gnl\|CDD\|224015
NZ_CP047849.1\|WP_000134963.1\|1207940_1208876_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP047849.1\|WP_001049165.1\|1202941_1203529_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000958224.1\|1211727_1212660_-\|HPr-kinase/phosphorylase	gnl\|CDD\|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	1.22623e-170
NZ_CP047849.1\|WP_000369722.1\|1206147_1207059_-\|RNase-adapter-RapZ	gnl\|CDD\|224574	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only].	4.97899e-170
NZ_CP047849.1\|WP_010956549.1\|1220679_1221790_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP047849.1\|WP_001224793.1\|1210389_1210875_-\|acetyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	4.85181e-30
NZ_CP047849.1\|WP_000506531.1\|1222104_1224636_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP047849.1\|WP_000229253.1\|1216120_1218106_-\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP047849.1\|WP_000057542.1\|1208942_1210382_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	3.57983e-06
NZ_CP047849.1\|WP_000749380.1\|1219431_1220271_-\|CHAP-domain-containing-protein	gnl\|CDD\|226451	COG3942, COG3942, Surface antigen [General function prediction only].	2.23913e-42
NZ_CP047849.1\|WP_000006551.1\|1204101_1205046_-\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	7.40812e-153
NZ_CP047849.1\|WP_000513308.1\|1210882_1211722_-\|prolipoprotein-diacylglyceryl-transferase	gnl\|CDD\|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	1.39921e-119
NZ_CP047849.1\|WP_000638419.1\|1218374_1218611_-\|CsbA-family-protein	gnl\|CDD\|227234	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown].	4.73465e-34
NZ_CP047849.1\|WP_000617735.1\|1225049_1225622_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|224461	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis].	1.13584e-37
NZ_CP047849.1\|WP_000538141.1\|1218607_1219258_-\|HD-domain-containing-protein	gnl\|CDD\|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	6.51021e-58
NZ_CP047849.1\|WP_000662681.1\|1213266_1216113_-\|excinuclease-ABC-subunit-UvrA	gnl\|CDD\|234734	PRK00349, uvrA, excinuclease ABC subunit UvrA.	0
NZ_CP047849.1\|WP_001248939.1\|1205155_1206151_-\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	5.06652e-172
NZ_CP047849.1\|WP_000816295.1\|1201796_1202699_+\|epimerase	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	4.94096e-153
NZ_CP047849.1\|WP_000134963.1\|1207940_1208876_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	4.19425e-154
NZ_CP047849.1\|WP_001049165.1\|1202941_1203529_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	4.59321e-148

>NZ_CP047849.1|WP_000958224.1|1211727_1212660_-|HPr-kinase/phosphorylase
MLTTEKLVETLKLDLIAGEEGLSKPIKNADISRPGLEMAGYFSHYASDRIQLLGTTELSFYNLLPDKDRAGRMRKLCRPETPAIIVTRGLQPPEELVEAAKELNTPLIVAKDATTSLMSRLTTFLEHALAKTTSLHGVLVDVYGVGVLITGDSGIGKSETALELVKRGHRLVADDNVEIRQINKDELIGKPPKLIEHLLEIRGLGIINVMTLFGAGSILTEKRIRLNINLENWNKQKLYDRVGLNEETLSILDTEITKKTIPVRPGRNVAVIIEVAAMNYRLNIMGINTAEEFSERLNEEIIKNSHKSEE
>NZ_CP047849.1|WP_000513308.1|1210882_1211722_-|prolipoprotein-diacylglyceryl-transferase
MGIVFNYIDPVAFNLGPLSVRWYGIIIAVGILLGYFVAQRALVKAGLHKDTLVDIIFYSALFGFIAARIYFVIFQWPYYAENPSEIIKIWHGGIAIHGGLIGGFIAGVIVCKVKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGSVSRAFLEQLHLPNFIIENMYINGQYYHPTFLYESIWDVAGFIILVNIRKHLKLGETFFLYLTWYSIGRFFIEGLRTDSLMLTSNIRVAQLVSILLILISISLIVYRRIKYNPPLYSKVGALPWPTKKVK
>NZ_CP047849.1|WP_001224793.1|1210389_1210875_-|acetyltransferase
MRKFLSKTHHHTNPLWRVYRLVKFSKVFKNVIIIEFSKFIPSMVLKRHIYKQLLNINIGNQSSIAYKVMLDIFYPELITIGSNSVIGYNVTILTHEALVDEFRYGPVTIGSNTLIGANATILPGITIGDNVKVAAGTVVSKDIPDNGFAYGNPMYIKMIRR
>NZ_CP047849.1|WP_000057542.1|1208942_1210382_-|tetratricopeptide-repeat-protein
MAQKNNNVIPMTFDDAFYRKMAKQKFKQREYKRAAEYFEKVLELSPDDLEIQIDYAQCLVQLGIAKKAEHLFYDNIIYNRHLEDSFYELSQLNIEVNEPNKAFLFGINYVIVSDDQDYRDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLHQPQEVQDHRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYALCHYTLLLYNTKENEQYQKYLKILNKVVPMNDDESFKLGIVLSYLKQYRASQQLLYPLYKKGKFLSIQMYNALAYNYYYLGEEDESHYYWDKLKQISKVEIGHAPWVIENSKEVFDQHILPLLQSDDSHYRLYGIFLLDQLNGKEIVMTESIWQVLENLNNYEKLYLTYLVQGLTLNKLDFIHRGLLTLYHNELFVSENDVMVAWINQGELIIAEKVDLTDVEPYIGAFIYLYFKNQPRNVTKKQITTWLGITQYKLNKMIEFLLSI
>NZ_CP047849.1|WP_000134963.1|1207940_1208876_-|thioredoxin-disulfide-reductase
MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA
>NZ_CP047849.1|WP_000369722.1|1206147_1207059_-|RNase-adapter-RapZ
MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLVAVVDKVKSESDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDLLDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
>NZ_CP047849.1|WP_001248939.1|1205155_1206151_-|YvcK-family-protein
MRQIKVVLIGGGTGLSVMARGLREFPIDITAIVTVADNGGSTGKIRDEMDIPAPGDIRNVIAALSDSESVLSQLFQYRFEENQISGHSLGNLLIAGMTNITNDFGHAIKALSKILNIKGRVIPSTNTSVQLNAVMEDGEIVFGETNIPKKHKKIDRVFLEPNDVQPMEEAIDALREADLIVLGPGSLYTSVISNLCVNGISDALIHSDAPKLYVSNVMTQPGETDGYSVKDHIDAIHRQAGQPFIDYVICSTQTFNAQVLKKYEEKHSKPVEVNKAELEKESINVKTSSNLVEISENHLVRHNTKVLSTMIYDIALELISTIPFVPSDKRK
>NZ_CP047849.1|WP_000006551.1|1204101_1205046_-|DNA-binding-protein-WhiA
MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSLIKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDDEMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGSITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQVESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLNDLADKIRNGEQIEL
>NZ_CP047849.1|WP_001049165.1|1202941_1203529_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
>NZ_CP047849.1|WP_000816295.1|1201796_1202699_+|epimerase
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNDKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKALFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWAPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLIKE
>NZ_CP047849.1|WP_000662681.1|1213266_1216113_-|excinuclease-ABC-subunit-UvrA
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTVATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKIQLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNHTIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESHACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKTLNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYGSGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKYMTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSEQDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQIGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDTMRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIEVPEYRRPASDRKISIRGARSNNLKGVDVDIPLSIMTVVTGVSGSGKSSLVNEVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPATYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFENIPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKSIYILDEPTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYIIDLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>NZ_CP047849.1|WP_000229253.1|1216120_1218106_-|excinuclease-ABC-subunit-UvrB
MVEHYPFKIHSDFEPQGDQPQAIKEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG
>NZ_CP047849.1|WP_000638419.1|1218374_1218611_-|CsbA-family-protein
MIWYFSAAFFPCVLVVLFSVITRSKWVGTILTLILIGASIYKEYFHNEWIIFIDVVSLLAGYLIIDQLEFHKHQDEDR
>NZ_CP047849.1|WP_000538141.1|1218607_1219258_-|HD-domain-containing-protein
MGVHQYFKRLSDMERLIRLPGKFKYFEHNVAAHSFKVTKIAQYLATVEEYHGRKINWKSLYEKALNHDFAEVFTGDIKTPVKYASSELKKLFSQVEEEMVETFIEEEIPLQYRDVYKQRLQEGKDDSLEGQILSVADKIDLLYETFGEIQKRNPEELFFEIYEMSLETIIQFDHLASVQDFINNIIPEMLTENFIPRTELRETTMNILNKRKEENE
>NZ_CP047849.1|WP_000749380.1|1219431_1220271_-|CHAP-domain-containing-protein
MKKSLTVTVSSVLAFLALNNAAHAQQHGTQVKTPVQHNYVSNVQAQTQSPTTYTVVAGDSLYKIALEHHLTLNQLYSYNPGVTPLIFPGDVISLVPQNKVKQTKAVKSPVRKASQAKKVVKQPVQQASKKVVVKQAPKQAVTKTVNVAYKPAQVQKSVPTVPVAHNYNKSVANRGNLYAYGNCTYYAFDRRAQLGRSIGSLWGNANNWNYAAKVAGFKVDKTPEVGAIFQTAAGPYGHVGVVESVNPNGTITVSEMNYAGFNVKSSRTILNPGKYNYIH
>NZ_CP047849.1|WP_001790093.1|1220418_1220526_-|hypothetical-protein
MCLLKQHMQCAFSNITYGDFQGIELIIENVLNYMV
>NZ_CP047849.1|WP_010956549.1|1220679_1221790_-|peptide-chain-release-factor-2
MELSEIKRNIDKYNQDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD
>NZ_CP047849.1|WP_001790092.1|1221958_1222063_-|hypothetical-protein
MLWEESFYFTSVKYFKKCEEVVKRCYVLSFKKSV
>NZ_CP047849.1|WP_000506531.1|1222104_1224636_-|preprotein-translocase-subunit-SecA
MGFLSKILDGNNKEIKQLGKLADKVIALEEKTAILTDEEIRNKTKQFQTELADIDNVKKQNDYLDKILPEAYALVREGSKRVFNMTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLNALAGRGVHVITVNEYLSSVQSEEMAELYNFLGLTVGLNLNSKTTEEKREAYAQDITYSTNNELGFDYLRDNMVNYSEDRVMRPLHFAIIDEVDSILIDEARTPLIISGEAEKSTSLYTQANVFAKMLKQDEDYKYDEKTKAVHLTEQGADKAERMFKVENLYDVQNVDVISHINTALRAHVTLQRDVDYMVVDGEVLIVDQFTGRTMPGRRFSEGLHQAIEAKEGVQIQNESKTMASITFQNYFRMYNKLAGMTGTAKTEEEEFRNIYNMTVTQIPTNKPVQRNDKSDLIYISQKGKFDAVVEDVVEKHKAGQPVLLGTVAVETSEYISNLLKKRGIRHDVLNAKNHEREAEIVAGAGQKGAVTIATNMAGRGTDIKLGEGVEELGGLAVIGTERHESRRIDDQLRGRSGRQGDKGDSRFYLSLQDELMIRFGSERLQKMMSRLGLDDSTPIESKMVSRAVESAQKRVEGNNFDARKRILEYDEVLRKQREIIYNERNSIIDEEDSSQVVDAMLRSTLQRSINYYINTADDEPEYQPFIDYINDIFLQEGDITEDDIKGKDAEDIFEVVWAKIEAAYQSQKDILEEQMNEFERMILLRSIDSHWTDHIDTMDQLRQGIHLRSYAQQNPLRDYQNEGHELFDIMMQNIEEDTCKFILKSVVQVEDNIEREKTTEFGEAKHVSAEDGKEKVKPKPIVKGDQVGRNDDCPCGSGKKFKNCHGK
>NZ_CP047849.1|WP_000617735.1|1225049_1225622_-|ribosome-associated-translation-inhibitor-RaiA
MIRFEIHGDNLTITDAIRNYIEEKIGKLERYFNDVPNAVAHVKVKTYSNSATKIEVTIPLKNVTLRAEERNDDLYAGIDLINNKLERQVRKYKTRINRKSRDRGDQEVFVAELQEMQETQVDNDAYDDNEIEIIRSKEFSLKPMDSEEAVLQMNLLGHDFFVFTDRETDGTSIVYRRKDGKYGLIQTSEQ

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Crispr_ID: NZ_CP047849_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_5

1369776-1369868

Orphan

Consensus_repeat	Method
TAGCATCCAACTGCGTTCCTCTTCATCTTTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047849_5

>merge|NZ_CP047849|5|1369776-1369868|CRISPRCasFinder
TAGCATCCAACTGCGTTCCTCTTCATCTTTAGCGATTAGAGGCTTTTATGCAGTTGTGCCTTAGCATCCAACTGCGTTCCTCTTCACCTTTAG

>NZ_CP047849|5|5|1369776-1369868|CRISPRCasFinder
TAGCATCCAACTGCGTTCCTCTTCATCTTTAG	CGATTAGAGGCTTTTATGCAGTTGTGCCT
TAGCATCCAACTGCGTTCCTCTTCACCTTTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_001222133.1\|1364643_1365360_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000633782.1\|1377496_1378033_-\|flavodoxin-family-protein	unknown	unknown	gnl\|CDD\|223728
NZ_CP047849.1\|WP_000169042.1\|1360765_1360990_+\|DUF2922-domain-containing-protein	unknown	unknown	gnl\|CDD\|378571
NZ_CP047849.1\|WP_001788287.1\|1374967_1375489_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378039
NZ_CP047849.1\|WP_000362967.1\|1366163_1366964_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP047849.1\|WP_001813976.1\|1368819_1369647_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238563
NZ_CP047849.1\|WP_000808902.1\|1378243_1379182_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381309
NZ_CP047849.1\|WP_001819741.1\|1372767_1373151_-\|DUF1934-family-protein	unknown	unknown	gnl\|CDD\|226896
NZ_CP047849.1\|WP_153154990.1\|1363686_1364475_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP047849.1\|WP_000180230.1\|1375516_1376812_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP047849.1\|WP_000477504.1\|1376851_1377328_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP047849.1\|WP_001553862.1\|1361184_1362114_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225778
NZ_CP047849.1\|WP_001021145.1\|1371109_1372771_-\|arginine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234964
NZ_CP047849.1\|WP_000655099.1\|1373276_1373384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000901764.1\|1370085_1370721_-\|endonuclease-III-domain-containing-protein	unknown	unknown	gnl\|CDD\|225140
NZ_CP047849.1\|WP_001018677.1\|1363061_1363436_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|130944
NZ_CP047849.1\|WP_001790232.1\|1367721_1368672_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP047849.1\|WP_001200748.1\|1373458_1374469_-\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|181842
NZ_CP047849.1\|WP_000735558.1\|1365521_1366028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000365354.1\|1366947_1367667_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|223943

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000633782.1\|1377496_1378033_-\|flavodoxin-family-protein	gnl\|CDD\|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	3.16348e-26
NZ_CP047849.1\|WP_000169042.1\|1360765_1360990_+\|DUF2922-domain-containing-protein	gnl\|CDD\|378571	pfam11148, DUF2922, Protein of unknown function (DUF2922). This bacterial family of proteins has no known function.	1.74707e-13
NZ_CP047849.1\|WP_001788287.1\|1374967_1375489_-\|hypothetical-protein	gnl\|CDD\|378039	pfam08741, YwhD, YwhD family. This family of proteins are currently uncharacterized. They are around 170 amino acids in length.	8.7406e-98
NZ_CP047849.1\|WP_000362967.1\|1366163_1366964_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.17592e-26
NZ_CP047849.1\|WP_001813976.1\|1368819_1369647_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238563	cd01143, YvrC, Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.	1.32108e-72
NZ_CP047849.1\|WP_000808902.1\|1378243_1379182_-\|aldo/keto-reductase	gnl\|CDD\|381309	cd19083, AKR_AKR11A1_11D1, AKR11A and AKR11D families of aldo-keto reductase (AKR). Bacillus subtilis aldo-keto reductase IolS, also called vegetative protein 147 (VEG147), is a founding member of aldo-keto reductase family 11 member A1 (AKR11A1). It is able to reduce the standard aldo-keto reductase (AKR) substrates DL-glyceraldehyde, D-erythrose, and methylglyoxal in the presence of NADPH, albeit with poor efficiency in vitro. Bacillus aryabhattai aldo keto reductase is a founding member of aldo-keto reductase family 11 member D1 (AKR11D1).	7.3194e-168
NZ_CP047849.1\|WP_001819741.1\|1372767_1373151_-\|DUF1934-family-protein	gnl\|CDD\|226896	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown].	9.50091e-54
NZ_CP047849.1\|WP_153154990.1\|1363686_1364475_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	2.3327e-34
NZ_CP047849.1\|WP_000180230.1\|1375516_1376812_-\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	1.70707e-150
NZ_CP047849.1\|WP_000477504.1\|1376851_1377328_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.13315e-11
NZ_CP047849.1\|WP_001553862.1\|1361184_1362114_+\|DMT-family-transporter	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	7.93315e-37
NZ_CP047849.1\|WP_001021145.1\|1371109_1372771_-\|arginine--tRNA-ligase	gnl\|CDD\|234964	PRK01611, argS, arginyl-tRNA synthetase; Reviewed.	0
NZ_CP047849.1\|WP_000901764.1\|1370085_1370721_-\|endonuclease-III-domain-containing-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	3.98158e-90
NZ_CP047849.1\|WP_001018677.1\|1363061_1363436_+\|transcriptional-regulator	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	1.77309e-26
NZ_CP047849.1\|WP_000365354.1\|1366947_1367667_-\|HAD-family-hydrolase	gnl\|CDD\|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	3.6864e-38
NZ_CP047849.1\|WP_001200748.1\|1373458_1374469_-\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|181842	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional.	0
NZ_CP047849.1\|WP_001790232.1\|1367721_1368672_-\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	5.19191e-48

>NZ_CP047849.1|WP_001813976.1|1368819_1369647_-|ABC-transporter-substrate-binding-protein
MKDNDKQGSNDNGSSKSPYHRIVSLMPSNTEILYELGLGKYIVGVSTVDDYPKDVKKGKKQFDALNLNKEELLKAKPDLILAHESQKATANKVLSSLEKQGIKVVYVKDAQSIDETYNTFKQIGKLTHHDKQAEQLVEETKDNIDKVIDSIPAHHKKSKVFIEVSSKPEIYTAGKHTFFNDMLEKLEAQNVYSDINGWNPVTKESIIKKNPDILISTEAKTRSDYMDIIKKRGGFNKINAVKNTRIEVVNGDEVSRPGPRIDEGLKELRDAIYRK
>NZ_CP047849.1|WP_001790232.1|1367721_1368672_-|iron-ABC-transporter-permease
MTFNKVLLSWIVILIITTSIYLFWQLGDINDVFNQSILINVRLPRLLEALLTGMILTVAGLIFQTVLNNALADSFTLGLASGATFGSGLALFLGLTTLWIPVFSITFSLITLITVLVITSVLSQGYPVRILILSGLMIGALFNSLLYFLILLKPRKLNTIANYLFGGFGDAEYSNVSIIAITFIIALFGIFIILNQLKLLQLGELKSQSLGLNVQLITYIALCIASMITAINVAYVGIIGFIGMVIPQLIRKWQWKQSLGRQLALNIVTGGQIMVMADFIGSHILSPVQIPASIIIALIGIPVLFYMLISQSKRLH
>NZ_CP047849.1|WP_000365354.1|1366947_1367667_-|HAD-family-hydrolase
MDLNQIKAVVFDLEGTLLDRVKSREKFIEEQYERFHDYLIHVQLADFKKAFIELDDDEDNDKPDLYKEIIKRFHVDRLTWKDLFNDFEMHFYRYVFPYYDTLYTLEKLSQKGFQIGVIANGKSKIKQFRLHSLGLMHVINYLSTSETVGFRKPHPKIFEDMIDQLGVLPEQIMYVGDDALNDVAPARAMGMVSVWYKQEDAEIEPLEEEVDFTITTVEELLTILPIKNDNKGENYGSIY
>NZ_CP047849.1|WP_000362967.1|1366163_1366964_-|alpha/beta-hydrolase
MDLFTRKDGTSIHYSTLGEGYPIVLIHTVLDNYSVFNKLAAELAKSFQVVLIDLRGHGYSDKPRHIEIKDFSDDIVELLKYLYIEEVAFVCHEMGGIIGADISVRYPEFTSSLTLVNPTSIEGELPEERLFRKYAHIIRNWDPEKQDKFLNKRKYYRPRKMNRFLKHVVDTNEISTKEEIQAVKEVFKNADISQTYRNVVVPTKIIAGEFGERTTRLEAKEVADLIQNADFEVYQESSAFPFVEEQERFVEDTAAFINKHHDEKHV
>NZ_CP047849.1|WP_000735558.1|1365521_1366028_-|hypothetical-protein
MKKLLTASIIACSVVMGVGLVNTSAEAASGNSIDTVKQLIKGDQSLENVKIGESIKDVLTKYKNPMYSYNEDGTEHYYEFHTKKGMLLVTTDGKKNNGKVTHISMMYNDANGPTYQAVKNYVGKAVTHTEYSKVAGNFGYIEKGKTTYQFASAPKDKNIKLYRIDLEK
>NZ_CP047849.1|WP_001222133.1|1364643_1365360_-|hypothetical-protein
MRINDKILLENIEDYFNHKGLSPHLIDDIKEKVITDIKNSEKKDQDYIEYKRKSPAQIILMIQRNLFALQMNPVIFFIINFILISYLYDKQYVQFQAITGMSLFYCLVIFPMTIVVYLRVSQKNYLRSNKIEMIMGTIIAIISLLLIILQAFNITWGVIPITNFGHQFFFFIGIILVIAGIFYKRLEFSGIGLLFCQKTVDAMIHNPQSAQIFSLIIWILLVVLVIYFTIRLSSRTRL
>NZ_CP047849.1|WP_153154990.1|1363686_1364475_-|alpha/beta-fold-hydrolase
MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKSSKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGGVAKLFTDKYAYRVKSLTTIASKKDDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSAVAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGHAPHIEEPEAFMNYYLKFLKSVS
>NZ_CP047849.1|WP_001018677.1|1363061_1363436_+|transcriptional-regulator
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
>NZ_CP047849.1|WP_001553862.1|1361184_1362114_+|DMT-family-transporter
MLLFYIIGVLVGMLIPIQTSVNSRLSLYTKSPFYTSFISFSVGTICLIILNIIINPEVFTIHFYNNQSFNYTWVVGGLLGVSFLTGNLLLLPKLGATLTVIATVAGQIIMGVIIDTFGLFGATIHDFNLIKAIGVLLLIVGIVIMNQFNKNNLLLTDQKYLLFWLLLGFIFGFFPPIQTTINSALASHTHSPAFASLVSFTIGSIALLILTAIFNRSLKLKTSHLKFGKLKPIYFTGGILGMAFVTANIILMPHMGAALTTLIGMFGQILMGILIDHFGLFGSPKIAMTSRKTIGLLCILTGIILLRLF
>NZ_CP047849.1|WP_000169042.1|1360765_1360990_+|DUF2922-domain-containing-protein
MTKTLELSFKSSLDKPVKLQLPQLNNVVTEQVARDSMNALVDLNIIKSNSGTITKVHSAQIIDKTTTVLFEDKK
>NZ_CP047849.1|WP_000901764.1|1370085_1370721_-|endonuclease-III-domain-containing-protein
MLGTDELYKVLYEHLGPQFWWPADNDIEMMLGAILVQNTRWRNAEIALNQIKEHTHFNPNHILELPIETLQSLIHSSGFYKSKSLTIKTLLTWLARHHFNYQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIYDKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIKNYDFLEPYFKK
>NZ_CP047849.1|WP_001021145.1|1371109_1372771_-|arginine--tRNA-ligase
MNIIDQVKQTLVEEIAASINKAGLADEIPDIKIEVPKDTKNGDYATNIAMVLTKIAKRNPREIAQAIVDNLDTEKAHVKQIDIAGPGFINFYLDNQYLTAIIPEAIEKGDQFGHVNESKGQNVLLEYVSANPTGDLHIGHARNAAVGDALANILTAAGYNVTREYYINDAGNQITNLARSIETRFFEALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKNDLAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKDDKDRVLIKNDGTYTYFLPDIAYHFDKVKRGNDILIDLFGADHHGYINRLKASLETFGVDSNRLEIQIMQMVRLMENGKEVKMSKRTGNAITLREIMDEVGVDAARYFLTMRSPDSHFDFDMELAKEQSQDNPVYYAQYAHARICSILKQAKEQGIEVTAANDFTTITNEKAIELLKKVADFEPTIESAAEHRSAHRITNYIQDLASHFHKFYNAEKVLTDDIEKTKAHVAMIEAVRITLKNALAMVGVSAPESM
>NZ_CP047849.1|WP_001819741.1|1372767_1373151_-|DUF1934-family-protein
MLKQHNEKEKFEFTTEGTWQQRQSNFIRYVEQIEDATVNVTIKVDDDSVKLIRKGDINMNLHFVEGQTTTTFYDISAGRIPLEVKTLRILHFVSGDGGKLKIHYELYQDNEKMGSYQYEINYKEIGE
>NZ_CP047849.1|WP_000655099.1|1373276_1373384_-|hypothetical-protein
MKDSENLVFFGFEVLFVFYKMAYIYEALIKYGIVN
>NZ_CP047849.1|WP_001200748.1|1373458_1374469_-|alcohol-dehydrogenase-AdhP
MRAAVVTKDHKVSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARVVAVGLPVDKMNLDIPRLVLDGIEVVGSLVGTRQDLREAFEFAAENKVTPKVQLRKLEEINDIFEEMENGTITGRMVIKF
>NZ_CP047849.1|WP_001788287.1|1374967_1375489_-|hypothetical-protein
MEVISLSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFIDIGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTTERNEQGPYYAGLTACYLLVNKAIRRGYKSMPEHVNMMDKSMKHHIIIDQIGDENKAILKDFLMNHDEGMWKHSSDALHQAFN
>NZ_CP047849.1|WP_000180230.1|1375516_1376812_-|HD-domain-containing-protein
MTNAYVDLKLVEEKVFKDPIHRYIHVEDQLIWDLIKTKEFQRLRRIRQLGTLYLSFHTAEHSRFGHSLGVYEIVRRLIDESFIGHDAWDNKDRPLALCAALLHDLGHGPFSHSFEKIFNTDHEAYTQAIITGDTEVNAVLRKVAPEFPREVAEVINKTHHNKLVISMISSQIDADRMDYLQRDAYFTGVSYGAFDMERILRLMRPSKDEVLIKESGMHAVENFIMSRYQMYWQIYFHPVSRGGEVLLNNCLKRAKQLYNEGYEFKLHPHDFIPFFEETVTIEQYVELDEAVVTYYLEKWTKEDDAILSDLASRFINRDLFKYIPFDGSIITISELQELFEAGGINPDYYFVSEAFSDLPYDYDRPGSNRKPIHLLRQDGTIREISNQSLVIHSITGINRQDYKLYYPREMVAKIKDKTIREAIENLINELN
>NZ_CP047849.1|WP_000477504.1|1376851_1377328_-|GNAT-family-N-acetyltransferase
MFKVRQATEKDVVQIRDVATKAWFNTYLNIYAATTVNHLLEASYNEHHLKKRLQEQLFLVVEEGNDIVGFANFIYGEELYLSAHYVKPESQHTGYGTALLNEGLSRFEDKFEGVYLEVDNKNEEAVAYYKEQGFTILRSYEPEMYGEKLDLALMYKAF
>NZ_CP047849.1|WP_000633782.1|1377496_1378033_-|flavodoxin-family-protein
MITVLFGGSRPNGNTAQLTKFALQDLEYQWIDVTQHQFKPIRDVRHTAETITSYDDDYLPILDKILASDTIIFASPVYWYSISAPLKAFIEHWSETLQDKRYPNFKAQMAEKDFRVILVGGDCPKIKAKPAITQMKYSLDFLGATLNGYIIGTAEKPGDIMKDNYALARATEWNSILQ
>NZ_CP047849.1|WP_000808902.1|1378243_1379182_-|aldo/keto-reductase
MKQFVNLGKSDVEVFPIALGTNAVGGHNLYPNLDEEQGKDVVRQAINHGINLLDTAYIYGPERSEELVGEVVKEYPREQIKIATKGSHEFDENQEVHQNNQPEYLKQQVENSLKRLQTDYIDLYYIHFPDNNTPKDQAVAALQELKEQGKIKAIGVSNFTLDQLKEANKDGYVDVVQLEYNLLHRENEAVLQYCVDHQITFIPYFPLASGILAGKYDENTKFSDHRTTRRDFKPGVFEENVRRVKALESIAAAHQTSIANIVLAFYLTRPAIDVIIPGAKRAEQVVENIKAADIVLSDDEIQYIDELFPIED

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047849_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_6

1614177-1614278

Orphan

Consensus_repeat	Method
CAAATTTAATACTCAATTCATATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP047849_6

>merge|NZ_CP047849|6|1614177-1614278|CRISPRCasFinder
CAAATTTAATACTCAATTCATATATAGCTTTGATTTAAAAACTGATTTTTATAAACCTATAGAACTGTAATTTACTTTCAAATTTAATACTCAATTCATAAA

>NZ_CP047849|6|6|1614177-1614278|CRISPRCasFinder
CAAATTTAATACTCAATTCATATA	TAGCTTTGATTTAAAAACTGATTTTTATAAACCTATAGAACTGTAATTTACTTT
CAAATTTAATACTCAATTCATAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000991007.1\|1615136_1616525_+\|L-cystine-transporter	unknown	unknown	gnl\|CDD\|224736
NZ_CP047849.1\|WP_000394698.1\|1612423_1613086_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000868248.1\|1621286_1621670_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000424966.1\|1606444_1607986_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP047849.1\|WP_001289311.1\|1616605_1617361_-\|NADPH-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380322
NZ_CP047849.1\|WP_000041883.1\|1604698_1605403_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	unknown	unknown	gnl\|CDD\|367091
NZ_CP047849.1\|WP_000159787.1\|1604027_1604300_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP047849.1\|WP_000930486.1\|1618437_1619961_+\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
NZ_CP047849.1\|WP_000746687.1\|1620405_1621032_+\|NDxxF-motif-lipoprotein	unknown	unknown	gnl\|CDD\|380196
NZ_CP047849.1\|WP_000793011.1\|1609514_1610783_-\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP047849.1\|WP_000956132.1\|1613203_1614160_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235334
NZ_CP047849.1\|WP_000763768.1\|1611873_1612281_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP047849.1\|WP_001789518.1\|1614950_1615052_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000211676.1\|1622494_1622704_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_160203745.1\|1617852_1618422_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_CP047849.1\|WP_000264071.1\|1608010_1609477_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|235507
NZ_CP047849.1\|WP_160203744.1\|1610782_1611361_-\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_CP047849.1\|WP_000158374.1\|1621735_1622317_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP047849.1\|WP_000551776.1\|1605795_1606332_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_001795623.1\|1620039_1620333_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000991007.1\|1615136_1616525_+\|L-cystine-transporter	gnl\|CDD\|224736	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only].	0
NZ_CP047849.1\|WP_000424966.1\|1606444_1607986_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP047849.1\|WP_001289311.1\|1616605_1617361_-\|NADPH-dependent-oxidoreductase	gnl\|CDD\|380322	cd02146, NfsA-like, nitroreductase similar to Escherichia coli NfsA. This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.	5.03864e-88
NZ_CP047849.1\|WP_000041883.1\|1604698_1605403_+\|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin	gnl\|CDD\|367091	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system. PemK is a growth inhibitor in E. coli known to bind to the promoter region of the Pem operon, auto-regulating synthesis. This family represents the toxin molecule of a typical bacterial toxin-antitoxin system pairing. The family includes a number of different toxins, such as MazF, Kid, PemK, ChpA, ChpB and ChpAK.	9.65175e-08
NZ_CP047849.1\|WP_000159787.1\|1604027_1604300_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.23077e-11
NZ_CP047849.1\|WP_000930486.1\|1618437_1619961_+\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
NZ_CP047849.1\|WP_000793011.1\|1609514_1610783_-\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	4.54806e-170
NZ_CP047849.1\|WP_000956132.1\|1613203_1614160_+\|hypothetical-protein	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0.000748442
NZ_CP047849.1\|WP_000763768.1\|1611873_1612281_+\|hypothetical-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	2.0219e-12
NZ_CP047849.1\|WP_160203745.1\|1617852_1618422_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	8.5893e-125
NZ_CP047849.1\|WP_000264071.1\|1608010_1609477_-\|IMP-dehydrogenase	gnl\|CDD\|235507	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed.	0
NZ_CP047849.1\|WP_160203744.1\|1610782_1611361_-\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	3.68263e-118
NZ_CP047849.1\|WP_000158374.1\|1621735_1622317_-\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	2.78414e-49
NZ_CP047849.1\|WP_000746687.1\|1620405_1621032_+\|NDxxF-motif-lipoprotein	gnl\|CDD\|380196	NF033193, lipo_NDxxF, NDxxF motif lipoprotein. Members of this family are lipoproteins, about 200 amino acids long in precursor form, found in Staphylococcus aureus, Bacillus cereus, and various other Firmicutes. The protein family is named for one of its several highly conserved motifs.	1.67126e-71

>NZ_CP047849.1|WP_000956132.1|1613203_1614160_+|hypothetical-protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIELFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLVEDLRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLKAIQTSQEAIQEAQASQAKALAESTNKVEKNAVTEDKADSKDSKVAGVNTSTDAKTDTKAENAGDGTATKVDKEDQISATEAIEKASVEQSKNDNAAETSNKEATVDAEAQHDAEQQVAEAHAEASKQATSNDSLEAKAENDSTASQSEMSEPKPQEEKKGFFARLFNL
>NZ_CP047849.1|WP_000394698.1|1612423_1613086_+|hypothetical-protein
MEFKTIQSVKDPHYNEALKLYDTKLNLSLTEDKRIIKRSLENNKTENDYVFIVGLENDVVVSLATAHYEATTNSAFLIYLFAKDLPNHDELMTQTLHQIEHELNLLSNLVHSRSINFLMMEVPKEPADLTQDNGLIIEHRRQFLYEHQFERQTEIDYIHPTNDGHTKKVDLFLKKNIKLTKDIYGTSVKSNYILKYVFANGIAREIIYALLEEMDLRKPF
>NZ_CP047849.1|WP_000763768.1|1611873_1612281_+|hypothetical-protein
MADITVVNDTGELYNVINQKKSEGYLESELTIISKSKLHLNDLHDSEISLISTSGTFSDRMTKLLTGEDGEHAVLSRYNLAPDELEKYKQLILDDKMLVVAVRDKSSHQEVHENNSAYEEIDITHFAEASKGPKA
>NZ_CP047849.1|WP_160203744.1|1610782_1611361_-|xanthine-phosphoribosyltransferase
MELLGQKVKEDGVVIDEKILKVDGFLNHQIDAKLMNEVGRTFYEQFKDKGITKILTIEASGIAPAIMAALHFDVPCLFAKKAKPSTLTDGYYETSIHSFTKNKTSTVIVSKEFLSEEDTVLIIDDFLANGDASLGLYDIAQQANAKTAGIGIVVEKSFQNGQQRLEEAGLTVSSLCKVASLEGNKVTLVGEE
>NZ_CP047849.1|WP_000793011.1|1609514_1610783_-|purine-permease
MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTGTGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTGSVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAILIGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIESTGVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNNVIYGMVVLLLICGCIPKLGALANIMPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNLLIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEENVK
>NZ_CP047849.1|WP_000264071.1|1608010_1609477_-|IMP-dehydrogenase
MWESKFAKESLTFDDVLLIPAQSDILPKDVDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLGVIHKNMGVEEQADEVQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLRFIEDFSIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLVKDGRLEGLITIKDIEKVIEFPNAAKDEHGRLLVAAAIGISKDTDIRAQKLVEAGVDVLVIDTAHGHSKGVIDQVKHIKKTYPEITLVAGNVATAEATKDLFEAGADIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATEARKHGKAIIADGGIKFSGDIIKALAAGGHAVMLGSLLAGTEESPGATEIFQGRQYKVYRGMGSLGAMEKGSNDRYFQEDKAPKKFVPEGIEGRTAYKGALQDTIYQLMGGVRAGMGYTGSHDLRELREEAQFTRMGPAGLAESHPHNIQITKESPNYSF
>NZ_CP047849.1|WP_000424966.1|1606444_1607986_-|glutamine-hydrolyzing-GMP-synthase
MEMAKEQELILVLDFGSQYNQLITRRIREMGVYSELHDHEISIEEIKKMNPKGIILSGGPNSVYEEGSFTIDPEIYNLGIPVLGICYGMQLTTKLLGGKVERANEREYGKAIINAKSDELFAGLPAEQTVWMSHSDKVIEIPEGFEVIADSPSTDYAAIEDKKRRIYGVQFHPEVRHTEYGNDLLNNFVRRVCDCRGQWTMENFIEIEIEKIRQRVGDRRVLCAMSGGVDSSVVAVLLHKAIGDQLTCIFVDHGLLRKGEGDMVMEQFGEGFNMNIIRVNAKDRFMNKLKGVSDPEQKRKIIGNEFVYVFDDEASKLKGVDFLAQGTLYTDVIESGTKTAQTIKSHHNVGGLPEDMEFELIEPINTLFKDEVRKLGIELGIPEHLVWRQPFPGPGLGIRVLGEITEDKLEIVRESDAILRQVIREEGLEREIWQYFTVLPNIQSVGVMGDYRTYDHTVGIRAVTSIDGMTSDFARIDWEVLQKISSRIVNEVDHVNRVVYDITSKPPSTIEWE
>NZ_CP047849.1|WP_000551776.1|1605795_1606332_+|hypothetical-protein
MHNNNEFNKKLKDFIGSDKRMALVKGYVNEYKLTTVLRALNNSDYTKGTIHTRSIGNLKQIVDNRIIPKNITQNTIFKLSNLTLEVNLYERNTIYHGDFAIYYPVESALIIETDTPRLINHINNNPVQKIFIITTNDWSFNTLELEKIVDETIIYDLKQEDPKQYEILYKNKHGKLPY
>NZ_CP047849.1|WP_000041883.1|1604698_1605403_+|type-II-toxin-antitoxin-system-PemK/MazF-family-toxin
MSKNINQANSKLNTSNKKLKQAYSKSDSKNMKVIYMPHWLEFYSIAIHSDVTSNKKRYYKSYSRGTVVYVKLGSNIGSEFSGNHFCVILDNKDNKGKETVTIVPLSSKGNKNYLKLNESVLNLTATDLKKQIIDISSKVQALAQKYREIDIKLSTEDKKLLSNLNQKANELYRVIGVYSKHKGKDTYVNISAITTISKRRISKINDSDPTGTIIISEDDMNEIEKQLKIKFFSN
>NZ_CP047849.1|WP_000159787.1|1604027_1604300_+|transposase
MTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISNSIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
>NZ_CP047849.1|WP_001789518.1|1614950_1615052_-|hypothetical-protein
MQLNVNMMKFDRWHKGICKQIVLNSVVIGGKGK
>NZ_CP047849.1|WP_000991007.1|1615136_1616525_+|L-cystine-transporter
MNAFLTLINIIVLVIFIVILHMMARKHISFAKRVFTALGIGIVFGVLLHLIYGTHSNVITSTSDWFNIVGQGYVALLQMIVMPLIFISIVAAFTKIQIGEKFAKIGSLIFIFLIGTVTIAAIVGVVYALVFGLDASTINLGNAEQARGSEIAKQAKDLTAHTLPQQILELLPKNPFLDFTGQRATSTIAVVIFASFIGFAYLRVARKQPDHGELLKRAIDAIYSLVMAIVTFVLRLTPYGVLAIMANTLSTSDFGAIWTLGKFLIASYAALITMYIIHLIILSLLGISPIRYVKKTLEVLIFAFTSRSSAGALPLNVQTQTRRLGVPEGIANFAATFGLSIGQNGCAGIYPAMLAIMVAPVANVEIDLQFIVTLIAVVIISSFGVAGVGGGATFASILVLSTLNLPVALAGVLISVEPLIDMGRTALNVNDSMLAGTGTAKLTKHWDKDTFDSNDNAALTSH
>NZ_CP047849.1|WP_001289311.1|1616605_1617361_-|NADPH-dependent-oxidoreductase
MSEHVYNLVKKHHSVRKFKNKPLSEDVVKKLVEAGQSASTSSFLQAYSIIGIDDEKIKENLREVSGQPYVVENGYLFVFVIDYYRHHLVDQHAETDMENAYGSTEGLLVGAIDAALVAENIAVTAEDMGYGIVFLGSLRNDVERVREILDLPDYVFPVFGMAVGEPADDENGAAKPRLPFDHVFHHNKYHADKETQYAQMADYDQTISEYYDQRTNGNRKETWSQQIEMFLGNKARLDMLEQLQKSGLIQR
>NZ_CP047849.1|WP_160203745.1|1617852_1618422_+|peroxiredoxin
MSLINKEILPFTAQAFDPKKDQFKEVTQEDLKGSWSVVCFYPADFSFVCPTELEDLQNQYEELQKLGVNVFSVSTDTHFVHKAWHDHSDAISKITYTMIGDPSQTITRNFDVLDESTGLAQRGTFIIDPDGVVQASEINADGIGRDASTLAHKIKAAQYVRKNPGEVCPAKWEEGAKTLQPGLDLVGKI
>NZ_CP047849.1|WP_000930486.1|1618437_1619961_+|alkyl-hydroperoxide-reductase-subunit-F
MLNADLKQQLKQLLELMEGNVEFVASLGSDDKSKELKDLLTEITDMSPRLSLSEKSLKRTPSFSVNRPGEETGVTFAGIPLGHEFNSLVLAILQVSGRAPKEKQSIIDQIKKLEGSFHFETFISLTCQKCPDVVQALNLMSVINPNITHSMIDGAVFREESENIMAVPAVFLNGEEFGNGRMTIQDILSKLGSTADASEFENKEPYDVLIVGGGPASGSAAIYTARKGLRTGIVADRIGGQVNDTAGIENFITVKETTGSEFSSNLAAHIDQYDIDAMTGIRATDIEKTDEAIKVTLENGAVLESKTVIIATGAGWRKLNIPGEEQLINKGVAFCPHCDGPLFENKDVAVIGGGNSGVEAAIDLAGIVNHVTLFEFASELKADNVLQDRLRSLSNVDIKTNAKTTEVVGEDHVTGIRYEDMNTGEEHLLNLDGIFVQIGLLPNTSWLNDAVELNERGEIVIDRNNNTNVPGIFAAGDVTDQKNKQIIISMGAGANAALNAFDYIIRN
>NZ_CP047849.1|WP_001795623.1|1620039_1620333_+|hypothetical-protein
MINLIYTTRCAIMLKVCTSRKQINMKNDIEKEKYVNEIIMLLRTIPTSKLVQPIMQLFIDKAILNNVQNDALLIEKATHARNHLRLWSLQGHRDIPN
>NZ_CP047849.1|WP_000746687.1|1620405_1621032_+|NDxxF-motif-lipoprotein
MKKRLLLSTFLASTLILTGCASDQSDNEDHHTSTGIHAPKSAKKLETKDIFNSDKKNSDISDAEMKQAIEKYLSVNSDILDNKYIMQHKLDKQIDSQTKVTEKQAETLSHLSNLAVKNDLHFKKFVTENNIPKEYKKPVELMMNYFKALNSTIANVDEDIEKLSYQPQNKINVVDVPTKYAGDVNKKQQDKIKDFLKSKGIKSDVIDK
>NZ_CP047849.1|WP_000868248.1|1621286_1621670_+|hypothetical-protein
MKVRITFIILAILSTIVCLFLAAMHPTGPNTVTFEQPYLFTLNIIIMVLVALPSLVLAIYDYMSFRISSAILQFLGAISWFFLSLILSLTQFTPFTLASFITSIILFTSTIITLAIGGKSVEKNDSP
>NZ_CP047849.1|WP_000158374.1|1621735_1622317_-|histidine-phosphatase-family-protein
MTIYLVRHGESKSNYDNKHFRSYFCGQLDVPLTDTGTKSADDLCDYFKEKQIKHVYVSDLLRTQQTFEHIFPYDIASTTTPLLRERSLGVFEGEYKDEISANPKYEKYFNDPNFKDFRHSFSQKAPEGESYEDVYQRVEHFMNHVVNEDTQKDDIVIVAHQVVIRCLMVYFNKVSRAEAVDLKVENCKPYIIE
>NZ_CP047849.1|WP_000211676.1|1622494_1622704_+|hypothetical-protein
MTTQSFIFMNIILLDGATQRHPFFICQILAFLFPKFPHINLLLFNPILSTFSNIIIHIDHFHANKKDDN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP047849_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_7

2032366-2032539

Orphan

Consensus_repeat	Method
TGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAG	PILER-CR
TTACAATAATGTGCAAGTTGGCGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP047849_7

>merge|NZ_CP047849|7|2032366-2032539|PILER-CR,CRISPRCasFinder
TTGGCGAGGCCCCAACATAAAGAATTTCGAAAAGAAATTCTACAAACAATGCAAGTTGGCGGGGCCCCAACAAAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAAGCTGGCGGAAAGTCAGGTTACAATAATGTGCAAGTTGGGGT

>NZ_CP047849|7|1|2032366-2032510|PILER-CR
TTGGCGAGGCCCCAACATAAAGAATTTCGAAAAGAAATTCTACAAACAATGCA	AGTTGGCGGGGCCCCAA
CAAAGAAGCTGGCGGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCC	CAACATAGAAGCTGGC
GGAAAG

>NZ_CP047849|7|7|2032460-2032539|CRISPRCasFinder
TTACAATAATGTGCAAGTTGGCGG	GGCCCCAACATAGAAGCTGGCGGAAAGTCAGG
TTACAATAATGTGCAAGTTGGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000301926.1\|2040575_2041052_+\|peptide-methionine-(S)-S-oxide-reductase	unknown	unknown	gnl\|CDD\|235497
NZ_CP047849.1\|WP_000592609.1\|2027745_2028504_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP047849.1\|WP_000659675.1\|2037702_2038365_+\|capsular-polysaccharide-biosynthesis-protein-CapA	unknown	unknown	gnl\|CDD\|226453
NZ_CP047849.1\|WP_000185864.1\|2038381_2039074_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP047849.1\|WP_160203758.1\|2039070_2039838_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|226870
NZ_CP047849.1\|WP_000640266.1\|2025898_2026477_+\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|153419
NZ_CP047849.1\|WP_025175201.1\|2029325_2029505_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000170492.1\|2028500_2029133_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl\|CDD\|235067
NZ_CP047849.1\|WP_000639183.1\|2024916_2025930_+\|histidinol-phosphate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223157
NZ_CP047849.1\|WP_000635623.1\|2026473_2027052_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|171871
NZ_CP047849.1\|WP_000244278.1\|2040072_2040573_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379326
NZ_CP047849.1\|WP_000571736.1\|2027044_2027749_+\|1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|172156
NZ_CP047849.1\|WP_001159430.1\|2034891_2036130_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	unknown	unknown	gnl\|CDD\|274866
NZ_CP047849.1\|WP_000930643.1\|2023650_2024901_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|172308
NZ_CP047849.1\|WP_000944149.1\|2023043_2023658_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|172153
NZ_CP047849.1\|WP_000877317.1\|2033753_2034626_-\|intercellular-adhesin-biosynthesis-polysaccharide-N-deacetylase	unknown	unknown	gnl\|CDD\|188448
NZ_CP047849.1\|WP_000723836.1\|2032714_2033767_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-protein	unknown	unknown	gnl\|CDD\|226446
NZ_CP047849.1\|WP_000240580.1\|2034622_2034928_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthesis-protein-IcaD	unknown	unknown	gnl\|CDD\|188447
NZ_CP047849.1\|WP_000653261.1\|2036293_2036854_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376089
NZ_CP047849.1\|WP_000842036.1\|2030225_2032268_+\|YSIRK-domain-containing-triacylglycerol-lipase-Lip1	unknown	unknown	gnl\|CDD\|224001

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000301926.1\|2040575_2041052_+\|peptide-methionine-(S)-S-oxide-reductase	gnl\|CDD\|235497	PRK05528, PRK05528, peptide-methionine (S)-S-oxide reductase.	1.4924e-106
NZ_CP047849.1\|WP_000592609.1\|2027745_2028504_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	5.46363e-153
NZ_CP047849.1\|WP_000659675.1\|2037702_2038365_+\|capsular-polysaccharide-biosynthesis-protein-CapA	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	5.65863e-89
NZ_CP047849.1\|WP_000185864.1\|2038381_2039074_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	2.92039e-84
NZ_CP047849.1\|WP_160203758.1\|2039070_2039838_+\|tyrosine-protein-phosphatase	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	1.40974e-143
NZ_CP047849.1\|WP_000640266.1\|2025898_2026477_+\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|153419	cd07914, IGPD, Imidazoleglycerol-phosphate dehydratase. Imidazoleglycerol-phosphate dehydratase (IGPD; EC 4.2.1.19) catalyzes the dehydration of imidazole glycerol phosphate to imidazole acetol phosphate, the sixth step of histidine biosynthesis in plants and microorganisms where the histidine is synthesized de novo. There is an internal repeat in the protein domain that is related by pseudo-dyad symmetry, perhaps as a result of an ancient gene duplication. The apo-form of IGPD exists as a catalytically inactive trimer which, in the presence of specific divalent metal cations such as manganese (Mn2+), cobalt (Co2+), cadmium (Cd2+), nickel (Ni2+), iron (Fe2+) and zinc (Zn2+), assembles to form a biologically active high molecular weight metalloenzyme; a 24-mer with 4-3-2 symmetry. Each 24-mer has 24 active sites, and contains around 1.5 metal ions per monomer, each monomer contributing residues to three separate active sites. IGPD enzymes are monofunctional in fungi, plants, archaea and some eubacteria while they are encoded as bifunctional enzymes in other eubacteria, such that the enzyme is fused to histidinol-phosphate phosphatase, the penultimate enzyme of the histidine biosynthesis pathway. The histidine biosynthesis pathway is a potential target for development of herbicides, and IGPD is a target for the triazole phosphonate herbicides.	2.40504e-103
NZ_CP047849.1\|WP_000170492.1\|2028500_2029133_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	1.98613e-110
NZ_CP047849.1\|WP_000571736.1\|2027044_2027749_+\|1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase	gnl\|CDD\|172156	PRK13587, PRK13587, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional.	2.24553e-168
NZ_CP047849.1\|WP_000635623.1\|2026473_2027052_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|171871	PRK13142, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	1.76981e-127
NZ_CP047849.1\|WP_000244278.1\|2040072_2040573_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379326	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.30563e-13
NZ_CP047849.1\|WP_000639183.1\|2024916_2025930_+\|histidinol-phosphate-aminotransferase-family-protein	gnl\|CDD\|223157	COG0079, HisC, Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism].	5.6943e-85
NZ_CP047849.1\|WP_001159430.1\|2034891_2036130_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthase	gnl\|CDD\|274866	TIGR03937, Poly-beta-16-N-acetyl-D-glucosamine_synthase, poly-beta-1,6 N-acetyl-D-glucosamine synthase. Members of this protein family are biofilm-forming enzymes that polymerize N-acetyl-D-glucosamine residues in beta(1,6) linkage. One named members is IcaA (intercellular adhesin protein A), an enzyme that acts (with aid of subunit IcaD) in Polysaccharide Intercellular Adhesin (PIA) biosynthesis in Staphylococcus epidermis). The homologous member in E. coli is designated PgaC. Members are often encoded next to a polysaccharide deacetylase and involved in biofilm formation. Note that chitin, although also made from N-acetylglucosamine, is formed with beta-1,4 linkages.	0
NZ_CP047849.1\|WP_000930643.1\|2023650_2024901_+\|histidinol-dehydrogenase	gnl\|CDD\|172308	PRK13770, PRK13770, histidinol dehydrogenase; Provisional.	0
NZ_CP047849.1\|WP_000944149.1\|2023043_2023658_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|172153	PRK13584, hisG, ATP phosphoribosyltransferase.	2.32782e-134
NZ_CP047849.1\|WP_000877317.1\|2033753_2034626_-\|intercellular-adhesin-biosynthesis-polysaccharide-N-deacetylase	gnl\|CDD\|188448	TIGR03933, Poly-beta-16-N-acetyl-D-glucosamine_N-deacetylase, intercellular adhesin biosynthesis polysaccharide N-deacetylase. A common motif in bacterial biosynthesis of polysaccharide for export is modification that follows polymerization. This model describes a subfamily of polysaccharide N-deacetylases that acts on poly-beta-1,6-N-acetyl-D-glyscosamine as produced by Staphylococcus epidermidis and S. aureus. The end product in these species is designated polysaccharide intercellular adhesin (PIA), and this gene designated icaB (intercellular adhesion protein B). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Cellular processes, Pathogenesis].	1.47819e-150
NZ_CP047849.1\|WP_000723836.1\|2032714_2033767_-\|poly-beta-1,6-N-acetyl-D-glucosamine-export-protein	gnl\|CDD\|226446	COG3936, COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism].	5.4483e-115
NZ_CP047849.1\|WP_000240580.1\|2034622_2034928_-\|poly-beta-1,6-N-acetyl-D-glucosamine-synthesis-protein-IcaD	gnl\|CDD\|188447	TIGR03932, IcaD_partial, intracellular adhesion protein D. Members of this protein family are IcaD (intracellular adhesion protein D), which with catalytic subunit IcaA forms an N-acetylglucosaminyltransferase. In the absence of IcaC, this enzyme forms N-acetylglucosamine oligomers up to 20 in length. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	3.14464e-30
NZ_CP047849.1\|WP_000653261.1\|2036293_2036854_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|376089	pfam18665, TetR_C_37, Tetracyclin repressor-like, C-terminal domain. IcaR belongs to the tetracycline repressor (TetR) family of proteins, which are involved in a wide variety of gene regulations. It binds to a 42 bp region immediately upstream of the icaA gene. This entry represents the C-terminal domain which is involved in dimerization.	2.88245e-28
NZ_CP047849.1\|WP_000842036.1\|2030225_2032268_+\|YSIRK-domain-containing-triacylglycerol-lipase-Lip1	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	1.58472e-82

>NZ_CP047849.1|WP_000842036.1|2030225_2032268_+|YSIRK-domain-containing-triacylglycerol-lipase-Lip1
MKSQNKYSIRKFSVGASSILIATLLFLSGGQAQAAEKQVNMGNSQEDTVTAQSIGDQQTRENANYQRENGVDEQQHTENLTKNLHNDKTISEENHRKTDDLNKDQLKDDKKSSLNNKNIQRDTTKNNNANPSDVNQGLEQAINDGKQSKVASQQQSKEADNSQDSNANNNLPSQSRIKEAPSLNKLDQTSQREIVNETEIEKVQPQQNNQANDKITNYNFNNEQEVKPQKDEKTLSVSDLKNNQKSPVEPTKDNDKKNGLNLLKSSAVATLPNKGTKELTAKAKDDQTNKVAKQGQYKNQDPIVLVHGFNGFTDDINPSVLAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAVELYYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTLGTPHNGTHASDLAGNEALVRQIVFDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWRENDGLVSVISSQHPFNQAYTKATDKIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKLTDTKQA
>NZ_CP047849.1|WP_025175201.1|2029325_2029505_+|hypothetical-protein
MKSKLSNSGIDVTVKDVEKYMNRYNEVMKGKNGEKAKELCLSLLPINIIVVFTFFVFIL
>NZ_CP047849.1|WP_000170492.1|2028500_2029133_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQRVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW
>NZ_CP047849.1|WP_000592609.1|2027745_2028504_+|imidazole-glycerol-phosphate-synthase-subunit-HisF
MIKKRIIPCLDVKDGRVVKGIQFKGLRDIGNPVDLAMYYNEAGADELVFLDISKTEEGHSLMLEVIEQTASRLFIPLTVGGGIQSLDDITQLLNHGADKVSLNSSALKNPQLIKQASDKFGRQCICIAIDSYYDPERKAHYCCTTGGKKMTNIKVYDWVQQVEQLGAGELLVTSMGHDGMKQGFDIEHLANIKSLVNIPIIASGGGGNAQHFVELFDQTDVSAGLAASILHDRETTVQSIKEVIRQGGIAVR
>NZ_CP047849.1|WP_000571736.1|2027044_2027749_+|1-(5-phosphoribosyl)-5-((5--phosphoribosylamino)methylideneamino)imidazole-4--carboxamide-isomerase
MIELWPAIDLIGSTSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQHAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPGRIYLSVDAYGEDIKVNGWEEDTELNLFSFVRRLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAHQASFWEGLK
>NZ_CP047849.1|WP_000635623.1|2026473_2027052_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MIVIVDYGLGNISNVKRAIEHLGYEVVVSNTSKIIDQAETIILPGVGHFKDAMSEIKRLNLNAILAKNTDKKMIGICLGMQLMYEHSDEGDASGLGFIPGNISRIQTEYPVPHLGWNNLVSKHPMLNQDVYFVHSYQAPMSENVIAYAQYGADIPAIVQFNNYIGIQFHPEKSGTYGLQILRQAIQGGFIND
>NZ_CP047849.1|WP_000640266.1|2025898_2026477_+|imidazoleglycerol-phosphate-dehydratase-HisB
MIYQKQRNTAETQLNISISDDQSPSHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRVPSSKGVIE
>NZ_CP047849.1|WP_000639183.1|2024916_2025930_+|histidinol-phosphate-aminotransferase-family-protein
MIYIDKNESPVTPLDEKTMTSIISATPYNLYPDAAYEQFKEAYAKFYGLSPEQIIAGNGSDELIQKLMLIMPEGPALTLNPDFFMYQAYAAQVNREIAFVDAGSDLTFDLETILTKIDEVQPSFFIMSNPHNPSGKQFDTAFLTAIADKMKALNGYFVIDEAYLDYGTAYDVELAPHILRMRTLSKAFGIAGLRLGVLISTAGTIKHIQKIEHPYPLNVFTLNIATYIFRHREETRQFLTMQRQLAEQLKQIFDTHVADKMSVFPSNANFVLTKGSAAQQLGQYVYEQGFKPRFYDEPVMKGYVRYSIATASQLKQLEEIVKEWSAKYDLSKTTKHS
>NZ_CP047849.1|WP_000930643.1|2023650_2024901_+|histidinol-dehydrogenase
MLNAQQFLNQFSLEAPLDESLYPIIRDICQEVKVHGDKALKMYNLTFDHTKTDHLEISHEQIKAAFDTLDEKTKQALQQSYERIKAYQESIKQTNQQLEESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLAACYITQVDQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQAEHDELARTYAISEDAQVLKDLESRIAKALPNVDRYDIVSKSIANQHYLIHASNFDEACHVMNTIAPEHASIQTVNPQPYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTNRTARFTNGLSVNDFLTRNTVIHLSKDTFEQIADSAQHIAHVEALYNHQQSILIRQS
>NZ_CP047849.1|WP_000944149.1|2023043_2023658_+|ATP-phosphoribosyltransferase
MLRIAIAKGRLMDSLINYLDVIEYTTLSETLKNRERQLLLSVDNIECILVKGSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPETTNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELACVVDMVDGIVDIVQTGTTLKANGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSLEVSIANA
>NZ_CP047849.1|WP_000723836.1|2032714_2033767_-|poly-beta-1,6-N-acetyl-D-glucosamine-export-protein
MKKIRLELVYLRAIICAIIIITHLLTQITLKHENMEGGSLVLQFYIRNIVIFGTPCFIILSQLLTTLNYQKVTYRYLTTRVKYILIPYILMGLFYSYSESLLTDSSFNKQFIENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFILQQSFLYYFTNNTAFHDTVLHYYPLSENTIIFGWIFYFFLGAYMGYNYERVLNFLERYLVIMIVLAVATYFVFIALANGDYWNVTSFSYSLTPYNSIMFIVILGICTHFKTMLFNTIQMISAFSFFIYLLHPIILDSLFAYTNIFEDNTMVFLAISLLFILGLCIGVGMILREFYIFRFIIGKQPYKLNINAY
>NZ_CP047849.1|WP_000877317.1|2033753_2034626_-|intercellular-adhesin-biosynthesis-polysaccharide-N-deacetylase
MKYRKFIILVLSILIILPVSTLDGHHIANADDDSPKKLKYKENSALALNYHRVRKANFLNNFIYFFSSSKEIKNYSVSQSQFESQIKWLKSHDAKFLTLKEFLYYKKKGKFPKRSVWINFDDMDETIYENAYPILKKYKIPATGFIITGHVGEENFHNLDMISKKELKEMYKTGLWEFETHTHDLHNLSKNNKSKLMKASEATIIKDLNKSEKYLTKNFKKSQKTIAYPYGLMNDDKLPVIKKAGLKYGFSLEEKAVTPNSNDYYIPRILISDDAFEHLIKRWDGFHEKD
>NZ_CP047849.1|WP_000240580.1|2034622_2034928_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthesis-protein-IcaD
MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVALNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES
>NZ_CP047849.1|WP_001159430.1|2034891_2036130_-|poly-beta-1,6-N-acetyl-D-glucosamine-synthase
MQFFNFLLFYPVFMSIYWIVGSIYFYFTREIRYSLNKKPDINVDELEGITFLLACYNESETIEDTLSNVLALKYEKKEIIIINDGSSDNTAELIYKIKENNDFIFVDLQENRGKANALNQGIKQASYDYVMCLDADTIVDQDAPYYMIENFKHDPKLGAVTGNPRIRNKSSILGKIQTIEYASLIGCIKRSQTLAGAVNTISGVFTLFKKSAVVDVGYWDTDMITEDIAVSWKLHLRGYRIKYEPLAMCWMLVPETLGGLWKQRVRWAQGGHEVLLRDFFSTMKTKRFPLYILMFEQIISILWVYIVLLYLGYLFITANFLDYTFMTYSFSIFLLSSFTMTFINVIQFTVALFIDSRYEKKNMAGLIFVSWYPTVYWIINAAVVLVAFPKALKRKKGGYATWSSPDRGNTQR
>NZ_CP047849.1|WP_000653261.1|2036293_2036854_+|TetR/AcrR-family-transcriptional-regulator
MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNTPEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQKFGAVEESKSQFKDEVYSLLNIFLKK
>NZ_CP047849.1|WP_000659675.1|2037702_2038365_+|capsular-polysaccharide-biosynthesis-protein-CapA
MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF
>NZ_CP047849.1|WP_000185864.1|2038381_2039074_+|polysaccharide-biosynthesis-tyrosine-autokinase
MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMRKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNRDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES
>NZ_CP047849.1|WP_160203758.1|2039070_2039838_+|tyrosine-protein-phosphatase
MIDIHNHILVDIDDGPKTIGKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLAELRTHPEVQALDIKLFPGQEIRITDSILKGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALSQLTSSSLVGGFGKNIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLDRPTKPGKVKSFLKWF
>NZ_CP047849.1|WP_000244278.1|2040072_2040573_+|GNAT-family-N-acetyltransferase
MVLRKVIMQDLDQIIALENIGFSPEEAATREALKLRIEQIQETFIVAEKNDEVIGYINGPVIKERYISDDLFKNVSTNNSEGGYISVLGLVVAPNYQGQGIAGRLLNYFETLAKNHHRHGVTLTCRESLISFYEKYGYRNEGVSESCHGGIKWYNLVKNIKKDDEV
>NZ_CP047849.1|WP_000301926.1|2040575_2041052_+|peptide-methionine-(S)-S-oxide-reductase
MAVVYVAGGCLWGVEAFFATIPGIIHTEAGRANGRSSKLDGPYDGYAECVKLHFDDRMLTITDIMNYLFEIIDPYSVNQQGNDIGQKYRTGLYSCVDDHLIEARQFIERRKDRDQIAVEVLPLSNYIKSAEEHQQHLEKYPEDMHMCHISKDLLNKYK

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Crispr_ID: NZ_CP047849_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_8

2473950-2474143

Orphan

Consensus_repeat	Method
TGCAAGTTGGCGGGGCCCCAACA	CRT

3 spacers

The CRISPR arrays of NZ_CP047849_8

>merge|NZ_CP047849|8|2473950-2474143|CRT
TACAAGTTGGCAGGGCCCCAACACAGAAGCTGACAGAAAGTCAGCTTACAATAATGTGCAAGTTGGCGGGGCCCCAACATAGAGAATTTCAAAAAGAAATTCTACAGACAATGCAAGTTGGGGAACGGGGCCCCAACACAGAAGGTGACGAAAAGTCAGCATACAATAATGTGCAAGTTGGCGGGGCCCCAACA

>NZ_CP047849|8|2|2473950-2474143|CRT
TACAAGTTGGCAGGGCCCCAACA	CAGAAGCTGACAGAAAGTCAGCTTACAATAATG
TGCAAGTTGGCGGGGCCCCAACA	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA
AGTTGGGGAACGGGGCCCCAACA	CAGAAGGTGACGAAAAGTCAGCATACAATAATG
TGCAAGTTGGCGGGGCCCCAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_001161085.1\|2482888_2483206_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000259718.1\|2469719_2470979_+\|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl\|CDD\|238452
NZ_CP047849.1\|WP_000066900.1\|2474498_2474849_+\|HTH-type-transcriptional-regulator-SarV	unknown	unknown	gnl\|CDD\|130944
NZ_CP047849.1\|WP_000051206.1\|2483450_2483615_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000134528.1\|2469162_2469657_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP047849.1\|WP_160203775.1\|2474202_2474373_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000503820.1\|2468654_2469161_+\|molybdenum-cofactor-biosynthesis-protein-MoaB	unknown	unknown	gnl\|CDD\|223595
NZ_CP047849.1\|WP_053868512.1\|2467619_2468624_+\|molybdopterin-biosynthesis-protein-MoeB	unknown	unknown	gnl\|CDD\|181084
NZ_CP047849.1\|WP_000866971.1\|2471926_2472160_+\|molybdopterin-converting-factor-subunit-1	unknown	unknown	gnl\|CDD\|340452
NZ_CP047849.1\|WP_000808500.1\|2471474_2471921_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|223391
NZ_CP047849.1\|WP_001549681.1\|2477512_2477764_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000184419.1\|2474950_2476162_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP047849.1\|WP_000413865.1\|2478152_2479418_+\|lipid-II:glycine-glycyltransferase-FemX	unknown	unknown	gnl\|CDD\|225224
NZ_CP047849.1\|WP_000600967.1\|2476756_2477521_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP047849.1\|WP_000592303.1\|2479534_2482702_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP047849.1\|WP_000643988.1\|2472166_2472766_+\|molybdenum-cofactor-guanylyltransferase-MobA	unknown	unknown	gnl\|CDD\|234725
NZ_CP047849.1\|WP_000951058.1\|2476154_2476595_-\|winged-helix-DNA-binding-protein	unknown	unknown	gnl\|CDD\|197670
NZ_CP047849.1\|WP_000602937.1\|2470975_2471461_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	unknown	unknown	gnl\|CDD\|224677
NZ_CP047849.1\|WP_000913019.1\|2466844_2467450_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226628
NZ_CP047849.1\|WP_000230173.1\|2472785_2473808_+\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000259718.1\|2469719_2470979_+\|molybdopterin-molybdotransferase-MoeA	gnl\|CDD\|238452	cd00887, MoeA, MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MoeA, together with MoaB, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes.	9.49423e-160
NZ_CP047849.1\|WP_000066900.1\|2474498_2474849_+\|HTH-type-transcriptional-regulator-SarV	gnl\|CDD\|130944	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family. This model represents a family of transcriptional regulatory proteins in Staphylococcus aureus and Staphylococcus epidermidis. Some members contain two tandem copies of this region. This family is related to the MarR transcriptional regulator family described by pfam01047. [Regulatory functions, DNA interactions].	2.64009e-20
NZ_CP047849.1\|WP_000134528.1\|2469162_2469657_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	3.63862e-98
NZ_CP047849.1\|WP_000643988.1\|2472166_2472766_+\|molybdenum-cofactor-guanylyltransferase-MobA	gnl\|CDD\|234725	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed.	5.68918e-67
NZ_CP047849.1\|WP_000503820.1\|2468654_2469161_+\|molybdenum-cofactor-biosynthesis-protein-MoaB	gnl\|CDD\|223595	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism].	9.7838e-65
NZ_CP047849.1\|WP_053868512.1\|2467619_2468624_+\|molybdopterin-biosynthesis-protein-MoeB	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	6.44846e-131
NZ_CP047849.1\|WP_000866971.1\|2471926_2472160_+\|molybdopterin-converting-factor-subunit-1	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	8.16473e-25
NZ_CP047849.1\|WP_000808500.1\|2471474_2471921_+\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	5.56799e-58
NZ_CP047849.1\|WP_000184419.1\|2474950_2476162_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.27961e-72
NZ_CP047849.1\|WP_000413865.1\|2478152_2479418_+\|lipid-II:glycine-glycyltransferase-FemX	gnl\|CDD\|225224	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis].	4.8324e-143
NZ_CP047849.1\|WP_000600967.1\|2476756_2477521_+\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	1.50083e-38
NZ_CP047849.1\|WP_000592303.1\|2479534_2482702_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP047849.1\|WP_000951058.1\|2476154_2476595_-\|winged-helix-DNA-binding-protein	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.35323e-15
NZ_CP047849.1\|WP_000602937.1\|2470975_2471461_+\|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B	gnl\|CDD\|224677	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism].	4.35501e-50
NZ_CP047849.1\|WP_000913019.1\|2466844_2467450_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226628	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism].	3.32197e-115
NZ_CP047849.1\|WP_000230173.1\|2472785_2473808_+\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	1.0538e-165

>NZ_CP047849.1|WP_000230173.1|2472785_2473808_+|GTP-3',8-cyclase-MoaA
MVEQIKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTRARLSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQRKKINMNYIGG
>NZ_CP047849.1|WP_000643988.1|2472166_2472766_+|molybdenum-cofactor-guanylyltransferase-MobA
MKAIILAGGHSVRFGKPKAFAEVNGETFYSRVIKTLESTNMFNEIIISTNAQLATQFKYPNVVIDDENHNDKGPLAGIYTIMKQHPEEELFFVVSVDTPMITGKAVSTLYQFLVSHLIENHLDVAAFKEDGRFIPTIAFYSPNALGAITKALHSDNYSFKNVYHELSTDYLDVRDVDAPSYWYKNINYQHDLDALIQKL
>NZ_CP047849.1|WP_000866971.1|2471926_2472160_+|molybdopterin-converting-factor-subunit-1
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQKSDFIQPNDTVALIPPVSGG
>NZ_CP047849.1|WP_000808500.1|2471474_2471921_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKQFEIVTEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGHQKGNYEEAKREE
>NZ_CP047849.1|WP_000602937.1|2470975_2471461_+|molybdopterin-guanine-dinucleotide-biosynthesis-protein-B
MILQIVGYKKSGKTTLMRHIVSFLKSHGYTVATIKHHGHGKEDIQLQDSDVDHMKHFEAGADQSIVQGFQYQQTVTRVDNQNLTQIIEKSVTIDTNIVLVEGFKNADFEKVVVYRNEEELQVLQQLSNVCYSINVREHEDFTAFEQWLLNKIKNDCDTQLT
>NZ_CP047849.1|WP_000259718.1|2469719_2470979_+|molybdopterin-molybdotransferase-MoeA
MVVEKRNPIPVKEAIQRIVNQQSSMPAITVALEKSLNHILAEDIVATYDIPRFDKSPYDGFAIRSVDSQGASGQNRIEFKVIDHIGAGSVSDKLVGDHEAVRIMTGAQIPNGADAVVMFEQTIELEDTFTIRKPFSKNENISLKGEETKTGDVVLKKGQVINPGAIAVLATYGYAEVKVIKQPSVAVIATGSELLDVNDVLEDGKIRNSNGPMIRALAEKLGLEVGIYKTQKDDLDSGIQVVKEAMEKHDIVITTGGVSVGDFDYLPEIYKAVKAEVLFNKVAMRPGSVTTVAFVDGKYLFGLSGNPSACFTGFELFVKPAVKHMCGALEVFPQIIKATLMEDFTKANPFTRFIRAKATLTSAGATVVPSGFNKSGAVVAIAHANCMVMLPGGSRGFKAGHTVDIILTESDAAEEELLL
>NZ_CP047849.1|WP_000134528.1|2469162_2469657_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MTEFTHINQQGHAKMVDVSDKQITKRTAVAHSSITVNETIFKQISNNTNTKGNVLNTAQIAGIMAAKNTSTLIPMCHPLPLTGIDVHFSWDETNAPLYTLNIQTTVSTTGKTGVEMEALTAASATALTIYDMTKAVDKGMIIGETYLESKSGGKSGDFQRQSNQ
>NZ_CP047849.1|WP_000503820.1|2468654_2469161_+|molybdenum-cofactor-biosynthesis-protein-MoaB
MGEHQNVKLNRTVKAAVLTVSDTRDFDTDKGGQCVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITTGGTGIAQRDVTIEAVKPLLTKEIEGFGELFRYLSYVEDVGTRALLSRAVAGTVNNKLIFSIPGSTGAVKLALEKLIKPELNHLIHELTK
>NZ_CP047849.1|WP_053868512.1|2467619_2468624_+|molybdopterin-biosynthesis-protein-MoeB
MSQERYSRQILFKQIGEIGQSKINQKCALIIGMGALGTHVAEGLVRAGIAKLIIVDRDYIEFSNLQRQTLFTEEDALKMMPKVVVAKKHLLALRSDVDIDDYIAHVDYYFLETHGQDVDVIIDATDNFETRQLINDFAYKYRIPWIYGGVVQSTYTEAAFIPGKTPCFNCLVPQLPALNLTCDTVGVIQPAVTMATSLQLRDAMKVLTEQPIDTKITYGDIWEGSHYSFGFSKMQRSDCTTCGDVPSYPYLNKNEQRYATLCGRDTVQYENASITHDILVQFLKQHQLNYRSNSYMVMFEFKGHRIVAFKGGRFLIHGMTRTSDATHLMNLLFG
>NZ_CP047849.1|WP_000913019.1|2466844_2467450_+|ATP-binding-cassette-domain-containing-protein
MLKINVKYQLKNTLIRINIDDTEPKIYAVRGPSGIGKTTVLNMIAGLRKADEAIIEVNGQLLTDTAKNVNVKIQQRRIGYLFQDYQLFPNMTVYKNITFMAEPSEHIDQLIQTLNIDHLMKQYPMTLSGGEAQRVALARALSTKPDLILLDEPFSSLDDTTKDESITLVKRIFNEWQIPIIFVTHSNYEAEQMAHEIITIG
>NZ_CP047849.1|WP_160203775.1|2474202_2474373_-|hypothetical-protein
MFRFISFGQLVVYLTTFIPKKDILQLNGMECDINVKEPLKIYYVVILKSGIEMIFS
>NZ_CP047849.1|WP_000066900.1|2474498_2474849_+|HTH-type-transcriptional-regulator-SarV
MSNKVQRFIEAERELSQLKHWLKTTHKISIEEFVVLFKVYEAEKISGKELRDTLHFEMLWDTSKIDVIIRKIYKKELISKLRSETDERQVFYFYSTSQKKLLDKITKEIEVLSVTN
>NZ_CP047849.1|WP_000184419.1|2474950_2476162_-|MFS-transporter
MTNQGSLNKSPIFTKSFTINFLVNFIVYLCMYLLLVVIAGYSKQAFDASDSLAGLVVGLFIVGSLIGRFATGKFVNQIGPKRLLFIGLIALIITQLLYFIDGSLAFLIFVRLINGIATAVVTTATGTIAAYVTPVNRKSEGISLFSLSLVLGTAIGPFLGMLLITKYAIDLLFIICVILGILGLIISLFIKVDFEVTNNKTETNVIDKPRFSIHQFIAKEAIPVAVIMLLIGVTYASILTYLQAFALERHLVTAASYFFICYAIASLITRPIAGRLMDDKNENIIVYPAFIMLFLSFVCLISSYQSWLILLAGACLGLGYGNLSSAMQSIAIKVSPPIKYGIATSTFYVGLDAGVGFGPSFLGLFTHMFSYSEIFGFMAALAIITMLVYFLIHGRHVTRNAMN
>NZ_CP047849.1|WP_000951058.1|2476154_2476595_-|winged-helix-DNA-binding-protein
MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEKPTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNISQDQMQETINVMNQIHEILLKEAHND
>NZ_CP047849.1|WP_000600967.1|2476756_2477521_+|VOC-family-protein
MILKFDHIIHYIDQLDRFSFPGDVIKLHSGGYHHKYGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV
>NZ_CP047849.1|WP_001549681.1|2477512_2477764_-|hypothetical-protein
MRTIILSLFIIMNIVAIIMTLSQPLTVNYFSLRVILIFFTFILSIFFILIKSSRLNNILTILSIVLVIIHMGILAHSTYVYLY
>NZ_CP047849.1|WP_000413865.1|2478152_2479418_+|lipid-II:glycine-glycyltransferase-FemX
MEKMHITNQEHDAFVKSHPNGDLLQLTKWAETKKLTGWYARRIAVGRDGEVQGVAQLLFKKVPKLPYTLCYISRGFVVDYSNKEALNALLDSAKEIAKAEKAYAIKIDPDVEVDKGTDALQNLKALGFKHKGFKEGLSKDYIQPRMTMITPIDKNDDELLNSFERRNRSKVRLALKRGTTVERSDREGLKTFAELMKITGERDGFLTRDISYFENIYDALHEDGDAELFLVKLDPKENIAKVNQELNELHAEIAKWQQKMKTSEKQAKKAQNMINDAQNKIAKNEDLKRDLEALEKEHPEGIYLSGALLMFAGSKSYYLYGASSNEFRDFLPNHHMQYTMMKYAREHGATTYDFGGTDNDPDKDSEHYGLWAFKKVWGTYLSEKIGEFDYVLNQPLYQLIEQVKPRLTKAKIKISRKLKRK
>NZ_CP047849.1|WP_000592303.1|2479534_2482702_+|efflux-RND-transporter-permease-subunit
MIKKLLQFSLGNKFAIFLMVVLVVLGGVYASAKLKLELLPNVQNPVISVTTTMPGATPQSTQDEISSKIDNQVRSLAYVKNVKTQSIQNASIVTVEYENNTDMDKAEEQLKKEIDKIKFKDEVGQPELRRNSMDAFPVLAYSFSNKENDLKKVTKVLNEQLIPKLQTVDGVQNAQLNGQTNREITLKFKQNELEKYGLTADDVENYLKTATRTTPLGLFQFGDKDKSIVVDGQYQSVDAFKNINIPLTLAGGQGQSQSQSDNKQNSAMSDVNQASPQQNSKASAPNNISGMPTAKLGDLADITVGDVRTSISKTNGKDAVNLQITKAQDANTVQVAKDVQRKIDTFVDENKDFNVTKTMDTAKPVEKSLYTMVEKASLGTIVAIIVILLFLRNIRTTAISIISIPLSLLMALIALKLSDVSLNILTLGALTVAIGRVIDDSIVVVENIYRRLTDSEEQLKGENLIISATTEVFKPIMSSTLVTIIVFLPLVFVSGSVGEMFRPFALAIAFSLLASLLVSITLVPALAATLFKKGVKRRNKQHQEGLGVVSTTYKKVLHWSLNHKWIVIILSTLILVATIVFGGPRLGTSFISAGDDKFLAITYTPKPGETEQAVLNHAKDVEKYLKQKKHVKTIQYSVGGSSPVDPTGSTNSMAIMVEYDNDTPNFDVEADKVIKHADGFKHPGEWKNQDLGTGAGNKSVEVTVKGPSMDAIKSTVKDIEQKMKQVKGLANVKSDLSQTYDQYEIKVDQNKAAENGISASQLAMHLNENLPEKTVTTVKENGKTVDVKVKQNKQTDWSEDKLNNITLKKPTGGTIKLGDIATLVKTTTPSKLTQEQGDYATTVSAKVTNKDVGGTTRQVMSKINNLDKPNNVKVNIGGASDDINNAMTQLAFAMLAAIIIVYLILVITFKGGLAPFTILFSLPFTVIGVIIALLITGETISVPSLIGMLMLIGIVVTNAIVLIDRVINNEQQGMEMKEALIEAGGTRIRPILMTAIATIGALVPLLFGQDSSILISKGLAATVIGGLISSTLLTLVVVPVIYEILFTLKKRFTKR
>NZ_CP047849.1|WP_001161085.1|2482888_2483206_-|hypothetical-protein
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
>NZ_CP047849.1|WP_000051206.1|2483450_2483615_-|hypothetical-protein
MSLENQLAELKYDYVRLQGDIEKRESLNLDTSALVRQLKDIENEIRNVRAQMQD

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Crispr_ID: NZ_CP047849_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047849_9

2598156-2598306

Orphan

Consensus_repeat	Method
TGCATAAGAGCCCCTAACAACTAAAGTT	CRISPRCasFinder

2 spacers

csa3

The CRISPR arrays of NZ_CP047849_9

>merge|NZ_CP047849|9|2598156-2598306|CRISPRCasFinder
TAGAAAGAAGCCCCTAACAACTAAAGTTGAAAAATAGAGGAACACAGTTGGATGCTACGCATCAACTGCATAAGAGCCCCTAACAACTAAAGTTTAAAAGTAGGAGCGCCTGCGCTAAGCGCATGCATAAGAGCCCCTAACAACTAAAGTT

>NZ_CP047849|9|8|2598156-2598306|CRISPRCasFinder
TAGAAAGAAGCCCCTAACAACTAAAGTT	GAAAAATAGAGGAACACAGTTGGATGCTACGCATCAAC
TGCATAAGAGCCCCTAACAACTAAAGTT	TAAAAGTAGGAGCGCCTGCGCTAAGCGCA
TGCATAAGAGCCCCTAACAACTAAAGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047849.1\|WP_000648719.1\|2585128_2586235_-\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP047849.1\|WP_000370924.1\|2593953_2594811_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|223635
NZ_CP047849.1\|WP_000115564.1\|2595896_2597033_+\|SAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|366887
NZ_CP047849.1\|WP_001127960.1\|2602234_2603173_+\|class-I-mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|224399
NZ_CP047849.1\|WP_001802298.1\|2597719_2597824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000808817.1\|2603203_2603434_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000160304.1\|2607113_2607824_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP047849.1\|WP_001123303.1\|2605936_2606350_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	unknown	unknown	gnl\|CDD\|225556
NZ_CP047849.1\|WP_000070866.1\|2606549_2606993_+\|DNA-starvation/stationary-phase-protection-protein	unknown	unknown	gnl\|CDD\|223854
NZ_CP047849.1\|WP_000495671.1\|2598323_2599415_-\|lytic-regulatory-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_001292149.1\|2586234_2586669_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	unknown	unknown	gnl\|CDD\|227014
NZ_CP047849.1\|WP_000334465.1\|2591066_2592872_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP047849.1\|WP_000123393.1\|2604105_2605479_+\|EVE-domain-containing-protein	unknown	unknown	gnl\|CDD\|376640
NZ_CP047849.1\|WP_160203781.1\|2586680_2588813_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP047849.1\|WP_000083807.1\|2588847_2590386_-\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP047849.1\|WP_001024094.1\|2601134_2601800_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187554
NZ_CP047849.1\|WP_000003759.1\|2600662_2600983_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_CP047849.1\|WP_001790138.1\|2595515_2595608_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047849.1\|WP_000019744.1\|2599680_2600661_-\|CDF-family-zinc-efflux-transporter-CzrB	unknown	unknown	gnl\|CDD\|224151
NZ_CP047849.1\|WP_000908177.1\|2593103_2593886_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224044

Protein	Function_ID	Function_description	E-value
NZ_CP047849.1\|WP_000648719.1\|2585128_2586235_-\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP047849.1\|WP_000370924.1\|2593953_2594811_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.39747e-59
NZ_CP047849.1\|WP_000115564.1\|2595896_2597033_+\|SAP-domain-containing-protein	gnl\|CDD\|366887	pfam02037, SAP, SAP domain. The SAP (after SAF-A/B, Acinus and PIAS) motif is a putative DNA/RNA binding domain found in diverse nuclear and cytoplasmic proteins.	3.91533e-06
NZ_CP047849.1\|WP_001127960.1\|2602234_2603173_+\|class-I-mannose-6-phosphate-isomerase	gnl\|CDD\|224399	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism].	7.24075e-129
NZ_CP047849.1\|WP_000160304.1\|2607113_2607824_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	2.10672e-157
NZ_CP047849.1\|WP_001123303.1\|2605936_2606350_+\|thiol-disulfide-oxidoreductase-DCC-family-protein	gnl\|CDD\|225556	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function prediction only].	3.14887e-46
NZ_CP047849.1\|WP_000070866.1\|2606549_2606993_+\|DNA-starvation/stationary-phase-protection-protein	gnl\|CDD\|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	1.22744e-67
NZ_CP047849.1\|WP_001292149.1\|2586234_2586669_-\|mannitol-specific-phosphotransferase-enzyme-IIA-component	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	2.08822e-62
NZ_CP047849.1\|WP_000334465.1\|2591066_2592872_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP047849.1\|WP_000123393.1\|2604105_2605479_+\|EVE-domain-containing-protein	gnl\|CDD\|376640	pfam01878, EVE, EVE domain. This domain was formerly known as DUF55. Crystal structures have shown that this domain is part of the PUA superfamily. This domain has been named EVE and is thought to be RNA-binding.	3.86989e-06
NZ_CP047849.1\|WP_160203781.1\|2586680_2588813_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	2.74141e-67
NZ_CP047849.1\|WP_000083807.1\|2588847_2590386_-\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP047849.1\|WP_001024094.1\|2601134_2601800_+\|SDR-family-oxidoreductase	gnl\|CDD\|187554	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5. This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	5.74381e-48
NZ_CP047849.1\|WP_000003759.1\|2600662_2600983_-\|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	1.8473e-17
NZ_CP047849.1\|WP_000019744.1\|2599680_2600661_-\|CDF-family-zinc-efflux-transporter-CzrB	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	1.049e-108
NZ_CP047849.1\|WP_000908177.1\|2593103_2593886_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224044	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism].	9.86955e-104

>NZ_CP047849.1|WP_001802298.1|2597719_2597824_+|hypothetical-protein
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
>NZ_CP047849.1|WP_000115564.1|2595896_2597033_+|SAP-domain-containing-protein
MSVNARDLLVLHTNVNRLVGEEIFANKCLANNDVQIMNSIKKLIEAELLTTTNDFEVSIYKKTRPELQSILKSFGIKTTGNKPDLIKRIDDNFHIINNLDLPYVYIPTKKGEEILKKTEYLTSFIQSYGEISLERAYYLVENYIDENCDDKVAEIYKFEFQRKYDNGEFDFNHGYNFELNMLIDHYKRDVKDYDNARKYSNIYLYFGLRDFLKKLMSNYSYYDSKGNIDLNEIQNDLNRFINSSASGMYERLIYNENLSNNIMFELFKKDTQDYSDLEEQLIEKFINYVVSNVKKESRSNTLIELSKILENGYTIDKEEFKKEDDYLSKYIFTDIDYLKKLESKINVAIDIRSGEIHLVLDDDSLDILIQNQKYGNEF
>NZ_CP047849.1|WP_001790138.1|2595515_2595608_-|hypothetical-protein
MFIFKTTSKSHFHNNVKSLECIKIPINKNR
>NZ_CP047849.1|WP_000370924.1|2593953_2594811_+|Cof-type-HAD-IIB-family-hydrolase
MDNVKAIFLDMDGTILHENNQASTYTKDVINQLREKGYKVFLATGRSHSEIHQLVPQDFAVNGIISSNGTIGEVDGEIIFKHGLSLAQVQQITNLAKRQQIYYEVFPFEGNRVSLKEDETWMRDMIRSQDPINGVSHSEWSSRQDALAGKIDWVTKFPEGEYSKIYLFSSNLEKITAFRDELKQNHVQLQISVSNSSRFNAETMAYQTDKGTGIKEMIAHFGIHQEETLVIGDSDNDRAMFEFGHYTVAMKNARPEIQALTSDVTAYTNEEDGAAKYLAEHFLAE
>NZ_CP047849.1|WP_000908177.1|2593103_2593886_+|ABC-transporter-ATP-binding-protein
MLIQLDQIGRMKQGKTILKKISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATSGTVNLFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEIRNEAHQLLKLVGMSAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARESLLSILDSLSDSYPTLAMIYVTHFIEEITANFSKILLLKDGQSIQQGAVEDILTSENMSRFFQKNVAVQRWNNRFSMAMLE
>NZ_CP047849.1|WP_000334465.1|2591066_2592872_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGYIGYDNAKELLLKGLEKLEYRGYDSAGIAVVNDDNTTVFKEKGRIAELRKVADSSDFDGPVGIGHTRWATHGVPNHENSHPHQSSNGRFTLVHNGVIENYEELKGEYLQGVSFISETDTEVIVQLVEYFSNQGLSTEEAFTKVVSLLHGSYALGLLDAEDKDTIYVAKNKSPLLLGVGEGFNVIASDALAMLQVTSEYKEIHDHEIVIVKKDEVIIKDADGNVVERDSYIAEIDASDAEKGVYAHYMLKEIHEQPAVMRRIIQEYQDAEGNLKIDQDIINDVKEADRIYVIAAGTSYHAGLVGKEFLEKWAGVPTEVHVASEFVYNMPLLSEKPLFVYISQSGETADSRAVLVETNKLGHKSLTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAKEHGREADIDLLRELAKVTTAIEAIVDDAPIMEQIATDFLETTRNAFFIGRTIDYNVSLEGALKLKEISYIQAEGFAGGELKHGTIALIEEGTPVVGLATQEKVNLSIRGNVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYYAALHRDLDVDKPRNLAKSVTVE
>NZ_CP047849.1|WP_000083807.1|2588847_2590386_-|PTS-mannitol-transporter-subunit-IICB
MSQTEEKKGIGRRVQAFGSFLSSMIMPNIGAFIAWGFIAAIFIDNGWLPNKDLATLAGPMITYLIPLLIAFSGGRLIYDLRGGIIAATATMGVIVALPDTPMLLGAMIMGPLVGWLMKKTDQLIQPRTPQGFEMLFNNFSAGILGFIMTIAGFKILAPLMKFIMHILSVAVEALVHAHLLPLVSILVEPAKIVFLNNAINHGVFTPLGADQAAKAGQSILYTIESNPGPGLGILLAYMIFGKGTAKATSYGAGIIHFLGGIHEIYFPYVLMRPLLFIAVILGGMTGVATYQATGFGFKSPASPGSFIVYCLNAPRGEFLHMLLGVFLAALVSFVVAALIMKFTREPKQDLEAATAQMENTKGKKSSVASKLVSSDKNVNTEENASGNVSETSSSDDDPEALLDNYNTEDVDAHNYNNINHVIFACDAGMGSSAMGASMLRNKFKKAGINDITVTNTAINQLPKDAQLVITQKKLTDRAIKQTPNAIHISVDNFLNSPRYEELLNNLKKDDQA
>NZ_CP047849.1|WP_160203781.1|2586680_2588813_-|BglG-family-transcription-antiterminator
MLLSTREKEMIALLIKYHGQYITIHDIAQQLAVSSRTIHRELKGVEAYLTSFSLTLERANKKGLRIAGTDSDLNDLKQSIAQHQTIDLSVEEQKVIIIYALIQAKEPVKQYSLAQEIGVSVQTLAKMLDDLELDLNKYQLSLSRKRGEGIYLVGTESKKREFLSQLMVNNLNSTSVYSVIENHFVFHSLNQIHKDFVDLERIFNVERLLMDYLSALPYQLTESSYLTLTVHIVLSISRIKNGEYVALNDDIYDSVQNTFEHKVASELADKLGQIYDVTFNQAEIAFITIHLRGAKRKNLNDTSLNNRCEENKIKAFVNKVEMISGMTFVDLDTLVDGLTLHLNPAINRLQANIETYNPLTDMIKFKYPRLFENVRLALNDCWPDLIFPESEIAFIVLHFGGSIKNQGNRFLNILVVCSSGMGTSRLLSTRLEQVFSEIERITQASVSDLKSLDLSQYDGIISTVNLDIDSPYLTVNPLLPDSDISYVAQFLNTKSTFQETHDKSSNMIDKDDVHVETKDVDGNTSFENEQTSYLTSVFEKHLSDEKSEQLLHHMRSGLTLLDSVKIVSTEVKQWQTYIADYLYQCDVINDPTSFAELLEQRLIDNPGWILSPYPVAIPHLRDNMIKHPMILITVLEEPLTLPSIQNDNQTIKYMISMFISDNDFMASLVSDLSEFLSLKLESIDTFMENPQELETLLRNKFLERIKKQFI
>NZ_CP047849.1|WP_001292149.1|2586234_2586669_-|mannitol-specific-phosphotransferase-enzyme-IIA-component
MSELFSNDNIFLNVNVNSQNEAIEKAGKALVDSGAVTDAYIQAMKDREQVVSTFMGNGLAIPHGTDEAKTNVIHSGLTLLQIPEGVDWDGEVVKVVVGIAGKDGEHLDLLSKIAITFSEEENVDRIVQAKSAEEIKQVFEEADA
>NZ_CP047849.1|WP_000648719.1|2585128_2586235_-|mannitol-1-phosphate-5-dehydrogenase
MKAVHFGAGNIGRGFIGYILADNNVKVTFADVNEEIINALAHDHQYDVILADESKTTTRVNNVDAINSMQPSEALKQAILEADIITTAVGVNILPIIAKSFAPFLKEKTNHVNIVACENAIMATDTLKKAVLDITGPLGNNIHFANSAVDRIVPLQKNENILDVMVEPFYEWVVEKDAWYGPELNHIKYVDDLTPYIERKLLTVNTGHAYLAYAGKFAGKATVLDAVEDSSIEAGLRRVLAETSQYITNEFDFTEAEQAGYVEKIIDRFNNSYLSDEVTRVGRGTLRKIGPKDRIIKPLTYLYNKDLERTGLLNTAALLLKYDDTADQETVEKNNYIKEHGLKAFLSEYAKVDDGLADEIIEAYNSLS
>NZ_CP047849.1|WP_000495671.1|2598323_2599415_-|lytic-regulatory-protein
MFTYFKSAFKNAKPQLLITLIYALIAFAVIAVVYLLANFQLAKYAQTIAIYSQFGQKPPVDAYLKVIAVLLIAAVVSLFVLVQIFIGITNVMKRAMSHEKVKFTDLFIAFKKGNYLKSVLIGLVSIAMIIVLSLLTSLLYKLFSPVSEMIMNSVQSSYADSTHLIGIAITTQSIIIIVVLLIKAIITWLLLIPIFNFMTSFVESTNDKVKTHLANGFKAMKNGQKTFFKFFIGILLLNLIIILFKTPVGYLISFNTQSLSQSVAENIIRVYTVMTIILFVVIHAIILMGIVQYYLKRGQKITKDKVKTADKNKKVVTEPKNTKVENDKVTTSVETKTEKAQDSLNDNTTKTMTSDKPEDNQPK
>NZ_CP047849.1|WP_000019744.1|2599680_2600661_-|CDF-family-zinc-efflux-transporter-CzrB
MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDTFSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSEVQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILIWAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQSVHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHKHDESIICSGTHSHSHNHHAHHHAHVH
>NZ_CP047849.1|WP_000003759.1|2600662_2600983_-|Zn(II)-responsive-metalloregulatory-transcriptional-repressor-CzrA
MSEQYSEINTDTLERVTEIFKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKRQGQSMIYSLDDIHVATMLKQAIHHANHPKESGL
>NZ_CP047849.1|WP_001024094.1|2601134_2601800_+|SDR-family-oxidoreductase
MNILVIGANGGVGSLLVQQLAKENVPFTAGVRQSDQLNALKSQGMKAILVDVENDSIETLTETFKPFDKVIFSVGSGGNTGADKTIIVDLDGAVKSMIASKEANIKHYVMVSTYDSRRQAFDDSGDLKPYTIAKHYADDYLRRSGLNYTILHPGALTNAAGSGKIEAAQYFDGKGEIPREDVATVLKEIVTSNHFNHQEFQIISGDQDIKDALTQFENETD
>NZ_CP047849.1|WP_001127960.1|2602234_2603173_+|class-I-mannose-6-phosphate-isomerase
MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRIWSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAEEDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYETMQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVSNDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSVFEGDFTLMISYV
>NZ_CP047849.1|WP_000808817.1|2603203_2603434_+|hypothetical-protein
MKQFLYIALVCGVIAGLGAFLHIPQYPSMTIPRIVAILGIISAMLTFKDKQISASLKFSALLINVLPLCGTFVASN
>NZ_CP047849.1|WP_000123393.1|2604105_2605479_+|EVE-domain-containing-protein
MTAETNYFWLNCGYNRWNHNEPLVGQTALFESGAHFNPSQGFRAFKKAKVGDQVIFYQVQTDTGLLGCGEIISVETGAQNKIRVQFRFNEQLKPLTADYLKRSEALEFRISNMKETLFNQITAEEFDLISGLGKGEIKIPRYFFLAETEEFEPGNQYTIYTHTYNGIKRNGYHFYTQLEEGDNIIFYNRTKNQSVVGIGEVSKHIHEKPPIPGRTNSTVIEVSYEKDITPITLSTLNKHPKLKNLYFLQENAKQAIASMSQAQYDAIIEMSDNNGLKSPFEMVQKPDMLESEKEEALKPFILLVVDRKEEGLKAANDLLQKANANPVITTGHPDFSEDMLYGKYLPNETGALYYREGFITQLMPKKDKSYLVIDNFNRIDTDIFQTYINVLEGYEVTLPRYNKDGNMIKWSRQKDSFYYFNPNWHIVGITYDSLEEIKEKYSEQFLKYTRIVKVKHD
>NZ_CP047849.1|WP_001123303.1|2605936_2606350_+|thiol-disulfide-oxidoreductase-DCC-family-protein
MPIVYYDGNCIYCYNYVIWLIQHDLPRNYQFATLKGEVGQQFFKQHPEAANKNSVILQKGDRIYFESQAIIKLITALPNRTKLLGVGLWLVPKPVRNFGYRMFANNRNRMWKTTWHQPNDYEKSFFLDDNAKVKLTD
>NZ_CP047849.1|WP_000070866.1|2606549_2606993_+|DNA-starvation/stationary-phase-protection-protein
MSNQQDVVKELNQQVANWTVAYTKLHNFHWYVKGPNFFSLHVKFEELYNEASQYVDELAERILAVGGNPVGTLTECLEQSIVKEAAKGYSAEQMVEELSQDFTNISKQLENAIEIAGNAGDDVSEDMFIGMQTSVDKHNWMFKSYLS
>NZ_CP047849.1|WP_000160304.1|2607113_2607824_-|purine-nucleoside-phosphorylase
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP047849_3	3.1\|1164523\|34\|NZ_CP047849\|CRISPRCasFinder	1164523-1164556	34	NZ_CP047849.1	601051-601084	0	1.0
NZ_CP047849_3	3.1\|1164523\|34\|NZ_CP047849\|CRISPRCasFinder	1164523-1164556	34	NZ_CP047849.1	689490-689523	0	1.0
NZ_CP047849_7	7.1\|2032419\|17\|NZ_CP047849\|PILER-CR	2032419-2032435	17	NZ_CP047849.1	1731428-1731444	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	78470-78485	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	89334-89349	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	601023-601038	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	685139-685154	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	689536-689551	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	897637-897652	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	998307-998322	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	1164226-1164241	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	1207554-1207569	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	1652845-1652860	0	1.0
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	2198462-2198477	0	1.0
NZ_CP047849_8	8.2\|2474029\|36\|NZ_CP047849\|CRT	2474029-2474064	36	NZ_CP047849.1	897690-897725	0	1.0
NZ_CP047849_2	2.2\|1115556\|26\|NZ_CP047849\|CRT	1115556-1115581	26	NZ_CP047849.1	89304-89329	1	0.962
NZ_CP047849_2	2.2\|1115556\|26\|NZ_CP047849\|CRT	1115556-1115581	26	NZ_CP047849.1	1207524-1207549	1	0.962
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	242842-242870	1	0.966
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	1652728-1652756	1	0.966
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	89393-89408	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	242675-242690	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	242731-242746	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	421511-421526	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	643492-643507	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	901605-901620	1	0.938
NZ_CP047849_7	7.2\|2032489\|16\|NZ_CP047849\|PILER-CR	2032489-2032504	16	NZ_CP047849.1	2384677-2384692	1	0.938
NZ_CP047849_8	8.2\|2474029\|36\|NZ_CP047849\|CRT	2474029-2474064	36	NZ_CP047849.1	242842-242877	1	0.972
NZ_CP047849_2	2.2\|1115556\|26\|NZ_CP047849\|CRT	1115556-1115581	26	NZ_CP047849.1	1652865-1652890	2	0.923
NZ_CP047849_2	2.4\|1115670\|26\|NZ_CP047849\|CRT	1115670-1115695	26	NZ_CP047849.1	1244420-1244445	2	0.923
NZ_CP047849_2	2.5\|1115696\|33\|NZ_CP047849\|CRISPRCasFinder	1115696-1115728	33	NZ_CP047849.1	1164219-1164251	2	0.939
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	897690-897718	2	0.931
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	2282476-2282504	2	0.931
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	78518-78546	2	0.931
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	421559-421587	2	0.931
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	1096028-1096056	2	0.931
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	NZ_CP047849.1	1164486-1164514	2	0.931
NZ_CP047849_8	8.1\|2473973\|33\|NZ_CP047849\|CRT	2473973-2474005	33	NZ_CP047849.1	689536-689568	2	0.939
NZ_CP047849_8	8.1\|2473973\|33\|NZ_CP047849\|CRT	2473973-2474005	33	NZ_CP047849.1	897637-897669	2	0.939
NZ_CP047849_8	8.1\|2473973\|33\|NZ_CP047849\|CRT	2473973-2474005	33	NZ_CP047849.1	89317-89349	2	0.939
NZ_CP047849_8	8.1\|2473973\|33\|NZ_CP047849\|CRT	2473973-2474005	33	NZ_CP047849.1	1207537-1207569	2	0.939
NZ_CP047849_8	8.1\|2473973\|33\|NZ_CP047849\|CRT	2473973-2474005	33	NZ_CP047849.1	2198445-2198477	2	0.939
NZ_CP047849_8	8.2\|2474029\|36\|NZ_CP047849\|CRT	2474029-2474064	36	NZ_CP047849.1	78511-78546	2	0.944
NZ_CP047849_8	8.2\|2474029\|36\|NZ_CP047849\|CRT	2474029-2474064	36	NZ_CP047849.1	421552-421587	2	0.944
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	689536-689568	2	0.939
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	897637-897669	2	0.939
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	89317-89349	2	0.939
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	601006-601038	2	0.939
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	1207537-1207569	2	0.939
NZ_CP047849_8	8.3\|2474088\|33\|NZ_CP047849\|CRT	2474088-2474120	33	NZ_CP047849.1	2198445-2198477	2	0.939

1. spacer 3.1|1164523|34|NZ_CP047849|CRISPRCasFinder matches to position: 601051-601084, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

2. spacer 3.1|1164523|34|NZ_CP047849|CRISPRCasFinder matches to position: 689490-689523, mismatch: 0, identity: 1.0

atgggccccaacaaagagaaattggattcccaat	CRISPR spacer
atgggccccaacaaagagaaattggattcccaat	Protospacer
**********************************

3. spacer 7.1|2032419|17|NZ_CP047849|PILER-CR matches to position: 1731428-1731444, mismatch: 0, identity: 1.0

aagaatttcgaaaagaa	CRISPR spacer
aagaatttcgaaaagaa	Protospacer
*****************

4. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 78470-78485, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

5. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 89334-89349, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

6. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 601023-601038, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

7. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 685139-685154, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

8. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 689536-689551, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

9. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 897637-897652, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

10. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 998307-998322, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

11. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 1164226-1164241, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

12. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 1207554-1207569, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

13. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 1652845-1652860, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

14. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 2198462-2198477, mismatch: 0, identity: 1.0

tcagcttacaataatg	CRISPR spacer
tcagcttacaataatg	Protospacer
****************

15. spacer 8.2|2474029|36|NZ_CP047849|CRT matches to position: 897690-897725, mismatch: 0, identity: 1.0

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcaaaaagaaattctacagacaatgca	Protospacer
************************************

16. spacer 2.2|1115556|26|NZ_CP047849|CRT matches to position: 89304-89329, mismatch: 1, identity: 0.962

tcgccagcttctgtgttggggccccg	CRISPR spacer
tcgtcagcttctgtgttggggccccg	Protospacer
***.**********************

17. spacer 2.2|1115556|26|NZ_CP047849|CRT matches to position: 1207524-1207549, mismatch: 1, identity: 0.962

tcgccagcttctgtgttggggccccg	CRISPR spacer
tcgtcagcttctgtgttggggccccg	Protospacer
***.**********************

18. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 242842-242870, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacagacaatgca	Protospacer
********************.********

19. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 1652728-1652756, mismatch: 1, identity: 0.966

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaagcaatgca	Protospacer
*********************.*******

20. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 89393-89408, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacgataatg	Protospacer
*********.******

21. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 242675-242690, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagctttcaataatg	Protospacer
******* ********

22. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 242731-242746, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagctttcaataatg	Protospacer
******* ********

23. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 421511-421526, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttactataatg	Protospacer
********* ******

24. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 643492-643507, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

25. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 901605-901620, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaaaaatg	Protospacer
*********** ****

26. spacer 7.2|2032489|16|NZ_CP047849|PILER-CR matches to position: 2384677-2384692, mismatch: 1, identity: 0.938

tcagcttacaataatg	CRISPR spacer
tcagcttacaacaatg	Protospacer
***********.****

27. spacer 8.2|2474029|36|NZ_CP047849|CRT matches to position: 242842-242877, mismatch: 1, identity: 0.972

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacagacaatgca	Protospacer
***********.************************

28. spacer 2.2|1115556|26|NZ_CP047849|CRT matches to position: 1652865-1652890, mismatch: 2, identity: 0.923

tcgccagcttctgtgttggggccccg	CRISPR spacer
tcgtcagcttctttgttggggccccg	Protospacer
***.******** *************

29. spacer 2.4|1115670|26|NZ_CP047849|CRT matches to position: 1244420-1244445, mismatch: 2, identity: 0.923

ccgccagcctctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** **.*****************

30. spacer 2.5|1115696|33|NZ_CP047849|CRISPRCasFinder matches to position: 1164219-1164251, mismatch: 2, identity: 0.939

ccaacttgcacactattgtaagctgactttcca	CRISPR spacer
ccaacttgcacattattgtaagctgacttacca	Protospacer
************.**************** ***

31. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 897690-897718, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcaaaaagaaattctacagacaatgca	Protospacer
****.***************.********

32. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 2282476-2282504, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

33. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 78518-78546, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaggaaattctacagacaatgca	Protospacer
********.***********.********

34. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 421559-421587, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

35. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 1096028-1096056, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

36. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to position: 1164486-1164514, mismatch: 2, identity: 0.931

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
tttcgaaaagaaattctacaggcaatgca	Protospacer
********************..*******

37. spacer 8.1|2473973|33|NZ_CP047849|CRT matches to position: 689536-689568, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

38. spacer 8.1|2473973|33|NZ_CP047849|CRT matches to position: 897637-897669, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

39. spacer 8.1|2473973|33|NZ_CP047849|CRT matches to position: 89317-89349, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

40. spacer 8.1|2473973|33|NZ_CP047849|CRT matches to position: 1207537-1207569, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

41. spacer 8.1|2473973|33|NZ_CP047849|CRT matches to position: 2198445-2198477, mismatch: 2, identity: 0.939

cagaagctgacagaaagtcagcttacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
***********..********************

42. spacer 8.2|2474029|36|NZ_CP047849|CRT matches to position: 78511-78546, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaggaaattctacagacaatgca	Protospacer
***********.***.********************

43. spacer 8.2|2474029|36|NZ_CP047849|CRT matches to position: 421552-421587, mismatch: 2, identity: 0.944

tagagaatttcaaaaagaaattctacagacaatgca	CRISPR spacer
tagagaatttcgaaaagaaattctacaggcaatgca	Protospacer
***********.****************.*******

44. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 689536-689568, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

45. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 897637-897669, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

46. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 89317-89349, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

47. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 601006-601038, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagatgacgaaaagtcagcttacaataatg	Protospacer
******.*************** **********

48. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 1207537-1207569, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

49. spacer 8.3|2474088|33|NZ_CP047849|CRT matches to position: 2198445-2198477, mismatch: 2, identity: 0.939

cagaaggtgacgaaaagtcagcatacaataatg	CRISPR spacer
cagaagctgacgaaaagtcagcttacaataatg	Protospacer
****** *************** **********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047849_2	2.1\|1115473\|53\|NZ_CP047849\|CRT	1115473-1115525	53	MG543995	Staphylococcus phage UPMK_1, partial genome	76246-76298	4	0.925
NZ_CP047849_2	2.2\|1115556\|26\|NZ_CP047849\|CRT	1115556-1115581	26	NZ_CP022541	Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence	333735-333760	5	0.808
NZ_CP047849_4	4.1\|1212923\|29\|NZ_CP047849\|CRISPRCasFinder	1212923-1212951	29	MN693281	Marine virus AFVG_25M371, complete genome	6448-6476	7	0.759

1. spacer 2.1|1115473|53|NZ_CP047849|CRT matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 4, identity: 0.925

ttgggagtgggacagaaatgatattttcgcaaaatttatttcgtcgtcccacc	CRISPR spacer
aagggagtgggacagaaatgatagtttctcaaaatttatttcgtcgtcccacc	Protospacer
  ********************* **** ************************

2. spacer 2.2|1115556|26|NZ_CP047849|CRT matches to NZ_CP022541 (Antarctobacter heliothermus strain SMS3 plasmid pSMS3-1, complete sequence) position: , mismatch: 5, identity: 0.808

tcgccagcttctgtgttggggccccg	CRISPR spacer
acgccagcttctgtgttgaggcctta	Protospacer
 *****************.****...

3. spacer 4.1|1212923|29|NZ_CP047849|CRISPRCasFinder matches to MN693281 (Marine virus AFVG_25M371, complete genome) position: , mismatch: 7, identity: 0.759

tttcgaaaagaaattctacaaacaatgca	CRISPR spacer
cacttagaagaaatcctacaaacaatgca	Protospacer
. .. *.*******.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 46106

Staphylococcus_phage(93.75%)

holin,tail,portal,integrase,head,terminase,capsid,protease

attL 40241:40257|attR 47676:47692

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625088.1\|0_1662_+\|terminase	terminase large subunit	A0A2I6PDJ8	Staphylococcus_phage	0.0e+00	100.0
WP_000025274.1\|1677_2865_+\|portal	phage portal protein	A0A2I6PDI1	Staphylococcus_phage	1.0e-219	100.0
WP_000642727.1\|2848_3586_+\|protease	Clp protease ClpP	G4KNQ2	Staphylococcus_phage	4.0e-129	99.6
WP_000154559.1\|3609_4755_+\|capsid	phage major capsid protein	G4KNQ3	Staphylococcus_phage	9.6e-215	100.0
WP_000238236.1\|4774_5059_+	hypothetical protein	A0A2I6PDJ3	Staphylococcus_phage	1.8e-45	100.0
WP_000150936.1\|5048_5333_+\|head,tail	phage head-tail adapter protein	A0A2I6PDJ5	Staphylococcus_phage	2.3e-45	100.0
WP_000755150.1\|5316_5679_+\|head,tail	head-tail adaptor protein	G4KNQ4	Staphylococcus_phage	4.4e-65	100.0
WP_000114226.1\|5675_6080_+	hypothetical protein	G4KNQ5	Staphylococcus_phage	4.3e-69	100.0
WP_000565498.1\|6076_6484_+	hypothetical protein	G4KNQ6	Staphylococcus_phage	7.1e-72	100.0
WP_000268735.1\|6484_7129_+\|tail	phage tail protein	A0EWZ9	Staphylococcus_phage	3.8e-120	100.0
WP_071621395.1\|7170_7395_+	hypothetical protein	A0A075LYE8	Staphylococcus_phage	3.0e-32	100.0
WP_001096355.1\|7444_7795_+	hypothetical protein	G4KNQ8	Staphylococcus_phage	7.8e-59	100.0
WP_160203704.1\|8039_12572_+\|tail	phage tail tape measure protein	A0A075M036	Staphylococcus_phage	0.0e+00	99.1
WP_000567393.1\|12568_14053_+\|tail	phage tail protein	A0A075LZV5	Staphylococcus_phage	5.3e-298	100.0
WP_000582184.1\|14068_17854_+	hypothetical protein	D2JLF9	Staphylococcus_phage	0.0e+00	97.8
WP_000654329.1\|17843_17996_+	hypothetical protein	D2JLG0	Staphylococcus_phage	1.2e-19	98.0
WP_001040255.1\|18042_18330_+	hypothetical protein	A0A075LZJ6	Staphylococcus_phage	5.8e-44	100.0
WP_000340977.1\|18385_18760_+	hypothetical protein	G4KNR3	Staphylococcus_phage	3.3e-39	100.0
WP_000034846.1\|19171_19954_+	staphylococcal enterotoxin type P	A0A075M4C7	Staphylococcus_phage	1.6e-149	99.6
WP_011447039.1\|20156_20333_+\|holin	putative holin-like toxin	D2JLG3	Staphylococcus_phage	2.2e-22	98.3
WP_031762631.1\|20385_20493_-	hypothetical protein	NA	NA	NA	NA
WP_000611512.1\|20544_20799_+\|holin	phage holin	D2JLG4	Staphylococcus_phage	4.1e-41	100.0
WP_000861038.1\|20810_21566_+	CHAP domain-containing protein	D2JLG5	Staphylococcus_phage	3.4e-152	100.0
WP_000920038.1\|21756_22248_+	staphylokinase	A0A1W6JQ12	Staphylococcus_phage	4.7e-86	99.4
WP_001110820.1\|22937_23234_+	peptidoglycan hydrolase	A0A1P8L6B4	Staphylococcus_phage	1.6e-49	95.9
WP_000702263.1\|23744_24095_+	complement inhibitor SCIN-A	A0A1P8L6B0	Staphylococcus_phage	7.5e-54	100.0
WP_001791826.1\|24147_24408_-	hypothetical protein	M9NS66	Staphylococcus_phage	2.3e-23	100.0
WP_000669791.1\|24718_24898_-	hypothetical protein	A0A1W6JQ29	Staphylococcus_phage	1.4e-24	98.3
WP_000669720.1\|25855_27910_+	MAP domain-containing protein	NA	NA	NA	NA
WP_001068542.1\|28233_29520_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_000990056.1\|29719_29818_+	hypothetical protein	NA	NA	NA	NA
WP_000681968.1\|30060_30237_+	hypothetical protein	NA	NA	NA	NA
WP_000691584.1\|30495_30876_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_000991302.1\|30872_31769_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	A0A2H4PQG7	Staphylococcus_phage	1.1e-16	30.2
WP_000645727.1\|31769_32450_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA
WP_000763048.1\|32446_33319_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	A0A2H4PQG7	Staphylococcus_phage	6.1e-28	35.2
WP_001221651.1\|33318_34059_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA
WP_000182842.1\|34124_34688_-	thioredoxin family protein	NA	NA	NA	NA
WP_000966288.1\|34808_35333_+	membrane protein	NA	NA	NA	NA
WP_001033971.1\|35392_35950_+	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_000713072.1\|35946_36789_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_001188077.1\|36845_37886_-	linear amide C-N hydrolase	NA	NA	NA	NA
WP_000267034.1\|38336_38510_+	hypothetical protein	NA	NA	NA	NA
WP_000289000.1\|39533_40685_+\|integrase	tyrosine-type recombinase/integrase	P97010	Streptococcus_pyogenes_phage	1.8e-11	31.6
40241:40257	attL	NA	NA	NA	NA
WP_002457928.1\|40723_42751_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_000410572.1\|42759_43125_+	hypothetical protein	NA	NA	NA	NA
WP_080009663.1\|44541_44961_-	hypothetical protein	U3PG23	Staphylococcus_phage	3.2e-27	50.4
WP_000733625.1\|45260_46106_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	3.4e-31	34.3
47676:47692	attR	NA	NA	NA	NA

DBSCAN-SWA_2

52727 : 54757

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000149686.1\|52727_53288_-	cysteine hydrolase	G3MA16	Bacillus_virus	2.0e-32	41.2
WP_000275730.1\|53659_54757_+	pectate lyase	U5PWM6	Bacillus_phage	1.9e-47	34.6

DBSCAN-SWA_3

58787 : 61071

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000284431.1\|58787_60257_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	4.5e-108	45.1
WP_000040873.1\|60249_61071_+	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	1.8e-69	52.7

DBSCAN-SWA_4

64773 : 71540

Gordonia_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000572878.1\|64773_66069_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.6e-16	32.9
WP_001165363.1\|66177_66480_+	hypothetical protein	NA	NA	NA	NA
WP_000272070.1\|66651_67344_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA
WP_000992921.1\|67340_69533_+	DNA helicase PcrA	A7KV33	Bacillus_phage	1.0e-135	42.2
WP_000774565.1\|69536_71540_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	5.8e-114	36.1

DBSCAN-SWA_5

78657 : 83686

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001231451.1\|78657_79605_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.2e-16	27.8
WP_001147868.1\|79685_81047_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A1X9I6F4	Streptococcus_phage	1.1e-103	43.8
WP_000548781.1\|81216_81747_+	DUF3267 domain-containing protein	NA	NA	NA	NA
WP_000140176.1\|81993_83064_+	DNA polymerase IV	NA	NA	NA	NA
WP_000613733.1\|83131_83686_-	3'-5' exonuclease	B5WZL1	Staphylococcus_phage	9.2e-30	36.3

DBSCAN-SWA_6

87137 : 87551

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001549145.1\|87137_87551_+	hypothetical protein	A0A1Q1PVU5	Staphylococcus_phage	5.1e-17	37.7

DBSCAN-SWA_7

92720 : 93350

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000153530.1\|92720_93350_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-06	30.8

DBSCAN-SWA_8

108834 : 110571

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000597238.1\|108834_110571_+	SAV1866 family putative multidrug efflux ABC transporter	W8CYL7	Bacillus_phage	1.7e-53	30.4

DBSCAN-SWA_9

127099 : 127828

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001144055.1\|127099_127828_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.0e-36	42.7

DBSCAN-SWA_10

138664 : 139009

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000290301.1\|138664_139009_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	7.5e-06	29.7

DBSCAN-SWA_11

148481 : 149222

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000216878.1\|148481_149222_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-24	29.8

DBSCAN-SWA_12

158103 : 221868

Staphylococcus_phage(92.16%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000206350.1\|158103_158892_-	DUF1828 domain-containing protein	A0A2H4PQI0	Staphylococcus_phage	5.3e-140	95.8
WP_001790220.1\|158904_159444_-	hypothetical protein	Q4ZCB9	Staphylococcus_virus	2.0e-61	76.8
WP_000473596.1\|160243_161179_+	beta-channel forming cytolysin	A0A2H4PQI5	Staphylococcus_phage	1.4e-174	100.0
WP_000782464.1\|161180_162164_+	bi-component leukocidin LukED subunit D	A0A2H4PQH7	Staphylococcus_phage	2.3e-185	99.1
WP_000416759.1\|162405_162549_+	gallidermin/nisin family lantibiotic	NA	NA	NA	NA
WP_000416756.1\|163285_163429_+	gallidermin/nisin family lantibiotic	A0A2H4PQH4	Staphylococcus_phage	5.3e-14	80.9
WP_001092605.1\|163493_166487_+	lantibiotic dehydratase	A0A2H4PQG8	Staphylococcus_phage	0.0e+00	97.3
WP_000566596.1\|166479_167724_+	lanthionine synthetase C family protein	A0A2H4PQH9	Staphylococcus_phage	5.1e-238	100.0
WP_000504439.1\|167739_168258_+	enterotoxin	A0A2H4PQG9	Staphylococcus_phage	2.0e-95	100.0
WP_000691541.1\|168267_169641_+	S8 family serine peptidase	A0A2H4PQH1	Staphylococcus_phage	2.9e-258	100.0
WP_001096791.1\|169663_170356_+	lantibiotic protection ABC transporter ATP-binding subunit	A0A2H4PQG7	Staphylococcus_phage	6.2e-124	100.0
WP_000581553.1\|170352_171114_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	A0A2H4PQH2	Staphylococcus_phage	1.7e-130	99.6
WP_000586140.1\|171110_171809_+	hypothetical protein	A0A2H4PQH0	Staphylococcus_phage	3.8e-113	94.4
WP_001092766.1\|172282_172849_-	DUF4888 domain-containing protein	A0A2H4PQH6	Staphylococcus_phage	9.5e-99	99.5
WP_001039435.1\|173812_174520_+\|protease	serine protease SplA	A0A2H4PQN3	Staphylococcus_phage	2.6e-130	100.0
WP_001039447.1\|174644_175367_+\|protease	serine protease SplB	A0A2H4PQN0	Staphylococcus_phage	2.4e-131	99.6
WP_001038867.1\|175424_176144_+\|protease	serine protease SplC	A0A2H4PQP7	Staphylococcus_phage	1.2e-130	99.2
WP_001038688.1\|176264_176984_+\|protease	serine protease SplF	A0A2H4PQP1	Staphylococcus_phage	1.1e-131	100.0
WP_001791797.1\|177048_177183_+	hypothetical protein	NA	NA	NA	NA
WP_001793440.1\|177163_178903_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.4e-289	100.0
WP_002868972.1\|185590_185950_+	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_001791893.1\|186297_186399_-	hypothetical protein	NA	NA	NA	NA
WP_001801861.1\|186521_186617_-	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA
WP_001549059.1\|186819_186963_+\|transposase	transposase	A0A2H4PQU1	Staphylococcus_phage	6.4e-20	100.0
WP_000070811.1\|187566_187950_+	hypothetical protein	NA	NA	NA	NA
WP_000375476.1\|187960_188137_+	hypothetical protein	NA	NA	NA	NA
WP_000809857.1\|188138_188324_+	hypothetical protein	NA	NA	NA	NA
WP_000494956.1\|188437_189079_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4PQN8	Staphylococcus_phage	2.6e-76	93.2
WP_000414205.1\|189296_189848_-	hypothetical protein	A0A2H4PQN4	Staphylococcus_phage	1.0e-20	94.1
WP_000627551.1\|189945_190290_-	DUF3969 family protein	A0A2H4PQN6	Staphylococcus_phage	6.3e-53	92.0
WP_000669046.1\|190330_190957_-	hypothetical protein	A0A2H4PQM7	Staphylococcus_phage	7.1e-79	82.7
WP_000070653.1\|191032_192028_-	DUF4352 domain-containing protein	A0A2H4PQN2	Staphylococcus_phage	7.1e-73	96.4
WP_001795535.1\|192108_192759_-	calcium-binding protein	A0A2H4PQM8	Staphylococcus_phage	2.7e-44	88.4
WP_011443643.1\|193061_193517_+	DUF4909 domain-containing protein	A0A2H4PQN7	Staphylococcus_phage	3.0e-79	98.6
WP_000348360.1\|193675_195154_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	2.0e-281	97.0
WP_000778525.1\|195158_196160_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	2.2e-186	97.9
WP_000718107.1\|196156_196414_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	7.2e-46	100.0
WP_000672014.1\|196479_196953_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	4.7e-83	98.1
WP_002868962.1\|196957_197704_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	7.1e-142	98.4
WP_000093392.1\|198078_198564_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	4.9e-19	35.4
WP_000109906.1\|198699_200292_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	0.0e+00	100.0
WP_000933822.1\|200662_201856_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.9e-218	99.7
WP_000366154.1\|201980_202889_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	3.2e-136	98.7
WP_000453320.1\|203100_203934_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.6e-156	98.6
WP_000623472.1\|206017_206371_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	6.5e-13	88.0
WP_001200542.1\|206367_206733_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.6e-59	100.0
WP_000091445.1\|206988_207291_-	hypothetical protein	NA	NA	NA	NA
WP_001096494.1\|207550_208264_+	transaldolase	M1PR54	Cyanophage	5.5e-19	35.3
WP_001168904.1\|208633_209269_-\|protease	CPBP family intramembrane metalloprotease SdpA	NA	NA	NA	NA
WP_001030465.1\|209564_210008_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	3.0e-55	85.0
WP_001153742.1\|209994_210438_-	competence protein ComK	NA	NA	NA	NA
WP_000671052.1\|210550_211021_-	RNA polymerase sigma factor SigS	A0A2H4PQT5	Staphylococcus_phage	1.0e-82	99.4
WP_000384171.1\|211219_211444_+	hypothetical protein	NA	NA	NA	NA
WP_001032833.1\|211719_212574_+	autolysin	Q4ZCC7	Staphylococcus_virus	9.8e-39	38.6
WP_000163235.1\|212868_213264_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	6.3e-73	100.0
WP_000989121.1\|213281_214574_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	5.0e-228	99.5
WP_000221180.1\|214573_214888_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	9.8e-53	99.0
WP_001261681.1\|215410_216913_+	FAD-dependent oxidoreductase	A0A2H4PQX2	Staphylococcus_phage	2.3e-30	100.0
WP_000384180.1\|217405_218437_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.4e-196	99.1
WP_000493892.1\|218443_219076_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.7e-112	99.5
WP_001159022.1\|219086_220268_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	6.6e-227	99.7
WP_001008551.1\|220280_220745_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.8e-70	99.4
WP_001196354.1\|220866_221868_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	9.0e-185	99.7

DBSCAN-SWA_13

225028 : 239142

Staphylococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000764419.1\|225028_225592_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	8.3e-103	99.5
WP_000526539.1\|225588_226542_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	2.2e-79	100.0
WP_001025061.1\|226651_227833_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	5.6e-218	100.0
WP_001108734.1\|228123_230538_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	99.3
WP_000836465.1\|230559_230871_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	1.6e-52	100.0
WP_160203708.1\|231196_237757_+	LPXTG-anchored repetitive surface protein SasC	A0A2H4PQU6	Staphylococcus_phage	6.8e-305	98.2
WP_000285019.1\|237873_239142_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	4.1e-57	100.0

DBSCAN-SWA_14

250794 : 256122

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001091387.1\|250794_251652_+	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	6.8e-72	100.0
WP_001048368.1\|251680_252277_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_000118293.1\|252297_256122_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.6e-83	47.0

DBSCAN-SWA_15

265027 : 266734

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000862083.1\|265027_266734_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.2e-274	100.0

DBSCAN-SWA_16

273350 : 275981

Cronobacter_phage(50.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000186029.1\|273350_274613_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.7e-85	42.1
WP_001279338.1\|274706_275981_-\|protease	trypsin-like serine protease	A0A1B1IRD3	uncultured_Mediterranean_phage	1.7e-10	29.0

DBSCAN-SWA_17

279750 : 283885

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808845.1\|279750_281355_-	phosphoglycerate dehydrogenase	A0A2H4PQU8	Staphylococcus_phage	1.2e-114	100.0
WP_000291430.1\|281341_282502_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA
WP_000553926.1\|282615_283062_-	OsmC family protein	NA	NA	NA	NA
WP_000174282.1\|283141_283885_+	glycerophosphoryl diester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	4.9e-18	30.0

DBSCAN-SWA_18

301425 : 304623

Streptomyces_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000226911.1\|301425_304623_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.3e-136	30.7

DBSCAN-SWA_19

309556 : 311314

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001232648.1\|309556_311314_+	pyruvate kinase	A0A2H4PQU5	Staphylococcus_phage	2.6e-41	100.0

DBSCAN-SWA_20

318175 : 326339

Feldmannia_irregularis_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000080028.1\|318175_318880_+	response regulator transcription factor	Q6XM27	Feldmannia_irregularis_virus	1.6e-07	28.7
WP_011443641.1\|318879_320541_+	PAS domain S-box protein	W8CYF6	Bacillus_phage	5.8e-35	39.4
WP_000849439.1\|321039_322527_+	hypothetical protein	NA	NA	NA	NA
WP_001038308.1\|322820_325451_+	DNA polymerase I	A8E2B3	Enterococcus_phage	6.1e-47	33.0
WP_001114452.1\|325466_326339_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	G3MA33	Bacillus_virus	2.0e-42	39.1

DBSCAN-SWA_21

330253 : 341406

Brevibacillus_phage(20.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000808621.1\|330253_331174_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	8.1e-31	29.4
WP_001790562.1\|331266_331389_+	hypothetical protein	NA	NA	NA	NA
WP_000435132.1\|331586_333524_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	7.8e-116	36.0
WP_000049154.1\|333949_335443_+	amino acid permease	NA	NA	NA	NA
WP_001791162.1\|335671_336199_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.1e-11	33.1
WP_001125540.1\|336227_336428_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_001138360.1\|336474_336831_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_000032659.1\|336972_337581_+	NUDIX domain-containing protein	A0A060AB76	Staphylococcus_phage	1.9e-20	35.5
WP_001280018.1\|337599_338529_+	hypothetical protein	NA	NA	NA	NA
WP_001790560.1\|338533_338644_+	hypothetical protein	NA	NA	NA	NA
WP_000127573.1\|338691_339993_+	trigger factor	NA	NA	NA	NA
WP_000472302.1\|340143_341406_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.0e-140	62.0

DBSCAN-SWA_22

350973 : 353604

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000425353.1\|350973_353604_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-153	40.7

DBSCAN-SWA_23

363471 : 398851

uncultured_Mediterranean_phage(18.75%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001005767.1\|363471_364476_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_001019172.1\|364477_365503_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_001112045.1\|365525_366665_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	5.4e-85	44.7
WP_001160682.1\|366683_366944_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	8.2e-05	35.3
WP_050958320.1\|367218_369498_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.8e-31	35.8
WP_000594993.1\|369700_371974_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.2e-62	28.8
WP_000364542.1\|371995_372514_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	5.6e-29	46.5
WP_001058583.1\|372941_375131_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A2I2L310	Orpheovirus	6.9e-12	37.7
WP_000869983.1\|375142_375595_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_000717800.1\|375591_376467_+	cell wall amidase	A0A0N9SGH1	Paenibacillus_phage	4.7e-12	33.7
WP_000590826.1\|376927_378190_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_000044799.1\|378205_379972_+\|tRNA	aspartate--tRNA ligase	A0A2K9L0E9	Tupanvirus	1.3e-16	27.3
WP_001790559.1\|380304_380433_+	hypothetical protein	NA	NA	NA	NA
WP_000682646.1\|380432_381206_+\|tRNA	tRNA threonylcarbamoyladenosine dehydratase	NA	NA	NA	NA
WP_000102735.1\|381366_382641_-	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.8e-105	50.7
WP_000704122.1\|382725_383148_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_000752909.1\|383247_383430_+	CsbD family protein	NA	NA	NA	NA
WP_000009238.1\|383469_383616_+	hypothetical protein	NA	NA	NA	NA
WP_000985886.1\|383852_384866_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_000409167.1\|385177_386320_+	cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.3e-33	29.3
WP_000066097.1\|386320_387439_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000567028.1\|387900_388569_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_001283311.1\|388570_391048_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	1.1e-66	29.0
WP_000734064.1\|391390_394021_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	3.2e-64	34.4
WP_000426912.1\|394083_394344_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_000939057.1\|394347_394776_+	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_000134779.1\|394790_395099_+	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_000342266.1\|395383_396022_+	O-methyltransferase	A0A2P1JQT7	Mycobacterium_phage	1.6e-09	28.8
WP_000137775.1\|396024_396948_+	U32 family peptidase	NA	NA	NA	NA
WP_000848304.1\|396959_398228_+	U32 family peptidase	Q6DW11	Phage_TP	4.0e-36	31.7
WP_000648617.1\|398227_398851_+	uridine kinase	A0A1V0SAA3	Catovirus	2.8e-35	41.1

DBSCAN-SWA_24

405523 : 407910

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000542309.1\|405523_406744_+	Fic family protein	Q9AZ49	Lactococcus_phage	5.0e-52	33.3
WP_001548981.1\|407157_407910_+	enterotoxin	A0EX09	Staphylococcus_phage	4.6e-48	39.8

DBSCAN-SWA_25

415179 : 421343

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000439693.1\|415179_415641_+	ComE operon protein 2	A7KUY9	Bacillus_phage	3.6e-35	58.8
WP_000953300.1\|415699_417847_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	1.2e-32	32.2
WP_001282562.1\|417903_418878_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_001274017.1\|418922_419174_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_000368341.1\|419519_421343_+	elongation factor 4	A0A1S5SF82	Streptococcus_phage	6.1e-22	25.1

DBSCAN-SWA_26

424834 : 427942

Micromonas_pusilla_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000034716.1\|424834_426667_+	molecular chaperone DnaK	G8DDB7	Micromonas_pusilla_virus	4.4e-137	46.5
WP_001119021.1\|426802_427942_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.2e-26	25.8

DBSCAN-SWA_27

434412 : 435360

Rhizobium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001117767.1\|434412_435360_+	PhoH family protein	L7TP00	Rhizobium_phage	6.4e-47	46.8

DBSCAN-SWA_28

438413 : 452141

Klosneuvirus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030080.1\|438413_439805_-\|tRNA	glycine--tRNA ligase	A0A1V0SIF1	Klosneuvirus	4.7e-46	27.4
WP_001789866.1\|440139_440763_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000411299.1\|440773_441592_+	kinase/pyrophosphorylase	NA	NA	NA	NA
WP_001556038.1\|441652_443452_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	6.0e-54	36.0
WP_001283055.1\|443675_444782_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.1e-37	38.1
WP_000624584.1\|444912_445590_+\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_000683931.1\|445592_446693_+	Nif3-like dinuclear metal center hexameric protein	A0A1S5V250	Saudi_moumouvirus	5.2e-08	29.6
WP_001062180.1\|446806_448153_+	DEAD/DEAH box helicase	A0A1V0SIR5	Klosneuvirus	5.3e-55	33.7
WP_000924214.1\|448162_449053_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	2.0e-26	33.1
WP_001213908.1\|449178_449964_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	8.0e-19	28.3
WP_000564316.1\|450005_450869_+	metal ABC transporter permease	NA	NA	NA	NA
WP_001095260.1\|450855_451266_+	transcriptional repressor	NA	NA	NA	NA
WP_000863556.1\|451541_452141_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	9.2e-60	54.7

DBSCAN-SWA_29

458314 : 458938

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223008.1\|458314_458938_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.6e-30	37.1

DBSCAN-SWA_30

464482 : 467294

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000019687.1\|464482_465829_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	6.3e-64	39.7
WP_000202189.1\|465821_467294_+	glycine dehydrogenase subunit 2	E3SN07	Prochlorococcus_phage	6.2e-81	41.3

DBSCAN-SWA_31

474794 : 481365

Indivirus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001286928.1\|474794_476132_+	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	1.6e-43	37.7
WP_000159865.1\|476124_476355_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000183378.1\|476332_477214_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	8.9e-11	26.1
WP_001124985.1\|477645_478098_+	transcriptional regulator ArgR	NA	NA	NA	NA
WP_000942211.1\|478113_479793_+	DNA repair protein RecN	NA	NA	NA	NA
WP_001291535.1\|479943_481365_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	5.1e-40	26.3

DBSCAN-SWA_32

488194 : 489601

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000193707.1\|488194_489601_+	NADP-dependent phosphogluconate dehydrogenase	A0A222YX62	Synechococcus_phage	4.3e-31	31.1

DBSCAN-SWA_33

494247 : 495732

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000105070.1\|494247_495732_-	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	2.4e-80	37.8

DBSCAN-SWA_34

499261 : 510875

Klosneuvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001171351.1\|499261_500170_-	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	3.4e-05	31.5
WP_000365246.1\|500251_500794_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000392691.1\|500898_501348_+	transcriptional repressor	NA	NA	NA	NA
WP_000447733.1\|501396_502284_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	5.6e-37	31.1
WP_160203711.1\|502361_502868_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_000273371.1\|502959_503691_+	segregation and condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	7.9e-05	21.8
WP_000368653.1\|503683_504226_+	SMC-Scp complex subunit ScpB	NA	NA	NA	NA
WP_000159577.1\|504218_504956_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000064078.1\|505088_505814_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-45	43.0
WP_000987772.1\|505794_507546_+	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.7e-21	33.6
WP_001838558.1\|507790_508720_+	DUF1672 domain-containing protein	NA	NA	NA	NA
WP_001033768.1\|508712_510875_+	hypothetical protein	B5WZK7	Staphylococcus_phage	1.1e-107	97.5

DBSCAN-SWA_35

515253 : 517932

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001151997.1\|515253_515502_-	ferredoxin	A0A127AYY7	Bacillus_phage	8.3e-15	48.0
WP_001163801.1\|515609_516563_+	hypothetical protein	NA	NA	NA	NA
WP_000902119.1\|516552_517932_+	ATP-dependent DNA helicase RecQ	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	2.9e-56	33.6

DBSCAN-SWA_36

527356 : 532823

Bacillus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001043863.1\|527356_527629_+	DNA-binding protein HU	A7KV42	Bacillus_phage	4.2e-28	73.3
WP_000450553.1\|528059_528632_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_000774684.1\|528634_529360_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_001817755.1\|529376_530321_+	heptaprenyl diphosphate synthase subunit II	A0A1V0SE37	Indivirus	1.3e-10	24.4
WP_000442480.1\|530412_530862_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	2.4e-28	43.8
WP_000789522.1\|531070_531271_+	hypothetical protein	NA	NA	NA	NA
WP_001269929.1\|531656_532823_+	chorismate synthase	A0A291AU41	Pandoravirus	7.6e-34	32.1

DBSCAN-SWA_37

536485 : 537061

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000005213.1\|536485_537061_+	IDEAL domain-containing protein	G3MAV7	Bacillus_virus	2.7e-08	27.2

DBSCAN-SWA_38

540431 : 547937

unidentified_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000361544.1\|540431_541634_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	3.2e-35	42.5
WP_000049919.1\|541620_542592_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_000525078.1\|542615_545309_+	ATP-dependent helicase DinG	A0A1X9I5C8	Streptococcus_phage	8.2e-47	34.4
WP_000858789.1\|545630_546923_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.9e-54	30.0
WP_000362212.1\|547250_547937_+	DnaD domain-containing protein	Q938N2	Temperate_phage	5.5e-08	32.6

DBSCAN-SWA_39

551677 : 552304

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001108889.1\|551677_552304_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5

DBSCAN-SWA_40

561629 : 562508

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001133011.1\|561629_562508_+	5'-3' exonuclease	S5M4P0	Bacillus_phage	6.2e-20	29.5

DBSCAN-SWA_41

601188 : 610578

Staphylococcus_phage(60.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000282171.1\|601188_601893_-	queuosine precursor transporter	A0A2H4J2N7	uncultured_Caudovirales_phage	8.4e-12	23.8
WP_001795441.1\|602137_602332_+	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_000691942.1\|602343_602595_+	hypothetical protein	NA	NA	NA	NA
WP_000404650.1\|602632_603757_+	virulence factor C	NA	NA	NA	NA
WP_000995287.1\|603772_604210_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA
WP_000934885.1\|604633_605590_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	1.6e-167	85.2
WP_000175746.1\|605789_606269_+	dihydrofolate reductase	A0A0N9S8H6	Staphylococcus_phage	2.0e-73	79.9
WP_000166059.1\|606283_607123_+	fatty acid kinase FakB2	A0A0N9SI50	Staphylococcus_phage	2.3e-48	77.3
WP_000159902.1\|607208_607742_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_000913315.1\|607734_608163_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_000473652.1\|608174_608675_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_000801007.1\|608674_608896_+	hypothetical protein	NA	NA	NA	NA
WP_000342125.1\|609087_610578_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	2.3e-22	30.5

DBSCAN-SWA_42

613986 : 615998

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000192137.1\|613986_614646_+	response regulator transcription factor ArlR	W8CYM9	Bacillus_phage	1.1e-34	33.8
WP_000166801.1\|614642_615998_+	sensor histidine kinase ArlS	A0A1V0SGX0	Hokovirus	3.5e-14	27.8

DBSCAN-SWA_43

622163 : 622955

Halovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001185421.1\|622163_622955_+	MoxR family ATPase	R4TG24	Halovirus	3.3e-12	34.2

DBSCAN-SWA_44

627435 : 632466

Lactobacillus_phage(33.33%)

lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000138402.1\|627435_628572_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	3.3e-34	28.3
WP_001788788.1\|628603_629233_-\|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein	NA	NA	NA	NA
WP_001215907.1\|629251_629521_-	acylphosphatase	NA	NA	NA	NA
WP_000269923.1\|629683_629992_+	DUF1033 family protein	NA	NA	NA	NA
WP_000809131.1\|630162_630363_+	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	66.2
WP_000876201.1\|630559_630961_+	sarA expression modulator protein Msa	NA	NA	NA	NA
WP_000216946.1\|631200_632466_-	diaminopimelate decarboxylase	A0A0P0YM38	Yellowstone_lake_phycodnavirus	6.2e-13	23.2

DBSCAN-SWA_45

640310 : 641912

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000942300.1\|640310_641912_-	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	5.5e-51	25.7

DBSCAN-SWA_46

646997 : 650451

Indivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203715.1\|646997_647849_+	phosphate ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	4.4e-15	29.2
WP_000974847.1\|647855_648497_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_000077571.1\|648636_650451_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	5.1e-154	47.1

DBSCAN-SWA_47

653865 : 654567

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571258.1\|653865_654567_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	1.5e-13	30.3

DBSCAN-SWA_48

662081 : 664436

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154116.1\|662081_662864_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	1.2e-27	36.3
WP_000173832.1\|662865_663864_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.8e-34	35.3
WP_000604817.1\|663869_664436_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.3e-23	32.1

DBSCAN-SWA_49

668754 : 670017

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000283015.1\|668754_670017_-	Y-family DNA polymerase	O64031	Bacillus_phage	2.2e-95	44.1

DBSCAN-SWA_50

679676 : 684070

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289569.1\|679676_682079_-	DNA topoisomerase IV subunit A	A0A172JHV7	Bacillus_phage	1.8e-93	32.2
WP_001548666.1\|682078_684070_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	8.0e-116	40.5

DBSCAN-SWA_51

690006 : 691653

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203717.1\|690006_691653_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	4.2e-22	24.2

DBSCAN-SWA_52

695322 : 696444

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000691284.1\|695322_696444_-	exonuclease SbcCD subunit D	A0A1X9I9U0	Staphylococcus_phage	4.3e-10	22.7

DBSCAN-SWA_53

700594 : 706250

Phage_Wrath(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001208760.1\|700594_701218_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	3.5e-17	63.8
WP_000380731.1\|701597_702461_-	CAP domain-containing protein	U5Q0C0	Bacillus_phage	4.1e-16	41.5
WP_001791425.1\|702534_702639_+	hypothetical protein	NA	NA	NA	NA
WP_000688126.1\|702635_703613_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	2.1e-186	100.0
WP_001085655.1\|703769_704039_-	30S ribosomal protein S14	NA	NA	NA	NA
WP_001265708.1\|704492_704642_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000082539.1\|704732_706250_-	catalase	A0A2K9L0T1	Tupanvirus	2.3e-91	43.2

DBSCAN-SWA_54

716386 : 720662

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000841351.1\|716386_716920_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.4e-21	43.5
WP_001027143.1\|717058_717247_+	hypothetical protein	NA	NA	NA	NA
WP_000202390.1\|717359_717962_-	response regulator transcription factor	NA	NA	NA	NA
WP_000670300.1\|717958_719050_-	sensor histidine kinase	NA	NA	NA	NA
WP_000603968.1\|719053_719785_-	ABC transporter permease	NA	NA	NA	NA
WP_000593436.1\|719753_720662_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	3.1e-22	25.9

DBSCAN-SWA_55

725210 : 731635

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000900530.1\|725210_725501_-	hypothetical protein	S6B1L4	Thermus_phage	5.4e-05	35.1
WP_000600812.1\|725928_726066_-	hypothetical protein	NA	NA	NA	NA
WP_000903039.1\|726062_726329_-	hypothetical protein	NA	NA	NA	NA
WP_001790531.1\|726448_726571_-	hypothetical protein	NA	NA	NA	NA
WP_000906224.1\|726605_726854_-	hypothetical protein	NA	NA	NA	NA
WP_000899337.1\|726974_727559_-	hypothetical protein	Q4ZE35	Staphylococcus_virus	2.0e-30	72.0
WP_000956747.1\|727604_727856_-	hypothetical protein	NA	NA	NA	NA
WP_001791646.1\|727856_728030_-	hypothetical protein	NA	NA	NA	NA
WP_000477492.1\|727984_728089_-	hypothetical protein	NA	NA	NA	NA
WP_000006110.1\|728600_728786_-	hypothetical protein	A0A0F6N3H3	Staphylococcus_phage	2.4e-19	78.7
WP_001788716.1\|729213_729324_-	hypothetical protein	NA	NA	NA	NA
WP_001002340.1\|730024_730231_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	1.3e-13	59.7
WP_001789892.1\|730524_730749_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	4.3e-18	71.0
WP_001789891.1\|731437_731635_-	hypothetical protein	A0A1W6JNK0	Staphylococcus_phage	1.7e-10	48.4

DBSCAN-SWA_56

736704 : 737181

Fowlpox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000448078.1\|736704_737181_+	glutathione peroxidase	Q70H87	Fowlpox_virus	1.2e-22	38.0

DBSCAN-SWA_57

743123 : 749595

Acanthocystis_turfacea_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001103743.1\|743123_743942_-	aquaporin family protein	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	2.4e-26	35.1
WP_001077635.1\|744406_744949_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_000516259.1\|744954_746964_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	4.8e-60	30.0
WP_000073352.1\|746976_749595_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	8.5e-41	23.7

DBSCAN-SWA_58

759009 : 760053

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203719.1\|759009_760053_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	4.2e-124	69.2

DBSCAN-SWA_59

764254 : 769798

Bacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000664766.1\|764254_765541_-	insulinase family protein	G3MBJ8	Bacillus_virus	6.7e-15	27.9
WP_000089940.1\|765540_766806_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	7.7e-40	26.5
WP_001293307.1\|766836_767550_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001806691.1\|767554_769798_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	6.9e-84	47.7

DBSCAN-SWA_60

774938 : 786751

Klosneuvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000864185.1\|774938_775910_-	riboflavin biosynthesis protein RibF	A0A1V0SJE1	Klosneuvirus	1.7e-07	32.1
WP_000282305.1\|775924_776842_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000097322.1\|777010_777361_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000043634.1\|777746_779864_-	translation initiation factor IF-2	E3T4N3	Cafeteria_roenbergensis_virus	2.4e-25	25.1
WP_000020853.1\|779868_780186_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000727423.1\|780182_780467_-	YlxR family protein	NA	NA	NA	NA
WP_000097466.1\|780487_781663_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000036631.1\|781683_782151_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_001820550.1\|782440_786751_-	DNA polymerase III subunit alpha	A0A0A8WJ41	Clostridium_phage	3.5e-23	41.2

DBSCAN-SWA_61

791049 : 791820

Flavobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000473705.1\|791049_791820_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	7.3e-25	41.5

DBSCAN-SWA_62

796594 : 810265

Erwinia_phage(16.67%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000379054.1\|796594_797998_-\|protease	ATP-dependent protease ATPase subunit HslU	A0A1B2IDZ7	Erwinia_phage	4.9e-27	25.6
WP_000072681.1\|798063_798609_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_001015597.1\|798605_799502_-	tyrosine recombinase XerC	A0A0K2CP59	Brevibacillus_phage	3.6e-31	31.5
WP_000195254.1\|799918_801226_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_001548566.1\|801381_803457_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-105	39.2
WP_000593193.1\|803630_804503_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_000672867.1\|804675_805920_-	FemA/FemB family glycyltransferase FmhC	NA	NA	NA	NA
WP_001041662.1\|805947_807066_-	LysM peptidoglycan-binding domain-containing protein	A0A1W6JQB6	Staphylococcus_phage	9.5e-50	61.1
WP_000110253.1\|807292_808201_-	succinate--CoA ligase subunit alpha	A0A2K9L1S3	Tupanvirus	3.0e-17	33.2
WP_001020801.1\|808222_809389_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA
WP_053868557.1\|809497_810265_-	ribonuclease HII	G9E3X7	Emiliania_huxleyi_virus	1.9e-25	44.1

DBSCAN-SWA_63

823649 : 825707

Acanthamoeba_polyphaga_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000043237.1\|823649_824381_-	ribonuclease III	A0A0G2Y7P9	Acanthamoeba_polyphaga_mimivirus	5.9e-24	28.8
WP_000426914.1\|824496_824730_-	acyl carrier protein	E3SSM9	Prochlorococcus_phage	1.6e-07	63.3
WP_000167269.1\|824972_825707_-	3-oxoacyl-[acyl-carrier-protein] reductase	Q06VL0	Trichoplusia_ni_ascovirus	3.1e-17	30.3

DBSCAN-SWA_64

836077 : 838072

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000579564.1\|836077_838072_-	serine/threonine protein kinase Stk1	M1PCM5	Moumouvirus	5.5e-24	34.8

DBSCAN-SWA_65

841219 : 842155

Prochlorococcus_phage(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161299.1\|841219_842155_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.2e-10	28.9

DBSCAN-SWA_66

847167 : 849424

Methanothermobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000722165.1\|847167_848367_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.2e-42	32.9
WP_000933956.1\|848582_848801_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_000368227.1\|848800_849424_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	3.6e-22	34.7

DBSCAN-SWA_67

852738 : 853350

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001040245.1\|852738_853350_-	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	6.2e-27	33.8

DBSCAN-SWA_68

857317 : 861928

Halovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001190913.1\|857317_858418_-	carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	5.6e-63	36.7
WP_000767028.1\|858419_859694_-	dihydroorotase	NA	NA	NA	NA
WP_001016166.1\|859711_860593_-	aspartate carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	4.6e-31	33.9
WP_001178619.1\|860620_861928_-	uracil permease	Q9KX94	Enterobacteria_phage	3.3e-54	34.0

DBSCAN-SWA_69

866391 : 869145

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000384691.1\|866391_869145_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	3.6e-90	28.0

DBSCAN-SWA_70

888735 : 888924

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001245802.1\|888735_888924_-	hypothetical protein	A0A0K1LL29	Staphylococcus_phage	3.8e-20	86.9

DBSCAN-SWA_71

897895 : 899855

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001802045.1\|897895_898120_-	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	5.6e-18	71.4
WP_000765708.1\|898076_898223_-	hypothetical protein	NA	NA	NA	NA
WP_160203724.1\|898895_899855_+	beta-channel forming cytolysin	A0A2H4PQH7	Staphylococcus_phage	2.8e-34	29.9

DBSCAN-SWA_72

913898 : 918456

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001018928.1\|913898_914213_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	6.6e-25	46.6
WP_001249285.1\|914385_916734_-	endonuclease MutS2	F2QAF8	Phaeocystis_pouchetii_virus	1.1e-15	25.3
WP_000161942.1\|916743_918456_-	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	8.9e-15	24.0

DBSCAN-SWA_73

923197 : 924256

Orpheovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000003559.1\|923197_924256_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-31	35.5

DBSCAN-SWA_74

936203 : 939111

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000401377.1\|936203_936686_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.6e-28	46.2
WP_001263796.1\|936687_937230_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_000814565.1\|937299_937689_+	hypothetical protein	NA	NA	NA	NA
WP_001049150.1\|937691_937946_-	YlbG family protein	NA	NA	NA	NA
WP_160203725.1\|938184_939111_+	glycerophosphodiester phosphodiesterase	M1I1K8	Paramecium_bursaria_Chlorella_virus	3.8e-12	25.8

DBSCAN-SWA_75

950628 : 952476

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000182654.1\|950628_952476_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	1.8e-21	26.2

DBSCAN-SWA_76

960611 : 969444

Mycoplasma_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000433551.1\|960611_961706_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.4e-37	44.3
WP_001020625.1\|961718_962258_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000455597.1\|962401_962677_-	UPF0223 family protein	NA	NA	NA	NA
WP_000260117.1\|962844_964251_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.2e-46	29.1
WP_000863441.1\|964254_965547_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_000068176.1\|965637_966615_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_000035320.1\|966618_967731_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	A0A0K0KW14	Prochlorococcus_phage	1.4e-05	27.8
WP_000668339.1\|967901_968528_-	cell-wall-binding lipoprotein	NA	NA	NA	NA
WP_000957036.1\|968892_969444_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.6e-13	42.2

DBSCAN-SWA_77

975558 : 979938

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001289614.1\|975558_975792_+	glutaredoxin family protein	G3MBF0	Bacillus_virus	8.4e-09	38.7
WP_000040054.1\|976028_977747_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_000437472.1\|977749_978016_-	phosphocarrier protein HPr	NA	NA	NA	NA
WP_000505965.1\|978169_978712_-	hypothetical protein	NA	NA	NA	NA
WP_000685079.1\|978765_979938_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	9.0e-75	42.8

DBSCAN-SWA_78

983117 : 997877

Prochlorococcus_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000921968.1\|983117_984518_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-10	26.3
WP_000273253.1\|984510_985317_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_001101908.1\|985581_986829_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_000709290.1\|986850_988329_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.2e-77	51.5
WP_000238664.1\|988343_988910_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.1
WP_000030812.1\|988912_989941_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	1.3e-61	41.4
WP_000483713.1\|989933_991418_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.2e-45	31.7
WP_000032728.1\|991396_993586_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.3e-140	39.7
WP_000666799.1\|993578_994250_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000848350.1\|994251_994515_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000174053.1\|994514_995219_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	7.3e-48	42.1
WP_001010412.1\|995222_996347_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_000861572.1\|996333_996816_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	6.2e-22	44.7
WP_160203726.1\|997016_997877_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	6.9e-40	38.8

DBSCAN-SWA_79

1008274 : 1012045

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203728.1\|1008274_1012045_+	mannosyl-glycoprotein endo-beta-N-acetylglucosamidase	A0A1J0MFB0	Staphylococcus_phage	1.1e-54	37.6

DBSCAN-SWA_80

1015711 : 1016722

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000676548.1\|1015711_1016722_+	Glu-specific serine endopeptidase SspA	A0A2H4PQP7	Staphylococcus_phage	6.2e-16	32.3

DBSCAN-SWA_81

1025028 : 1025319

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001788574.1\|1025028_1025319_+	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	7.5e-07	38.0

DBSCAN-SWA_82

1029882 : 1030524

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571179.1\|1029882_1030524_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-19	33.7

DBSCAN-SWA_83

1040719 : 1045930

Pithovirus(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455278.1\|1040719_1043044_-\|protease	serine protease	W5SAB9	Pithovirus	2.8e-11	27.4
WP_000928412.1\|1043262_1044066_-	TerC family protein	S5MAL1	Bacillus_phage	1.6e-30	40.5
WP_001049959.1\|1044367_1045930_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	4.9e-36	28.2

DBSCAN-SWA_84

1064857 : 1066666

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000082731.1\|1064857_1066666_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	9.3e-47	24.4

DBSCAN-SWA_85

1073461 : 1074448

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067038.1\|1073461_1074448_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.0e-15	30.4

DBSCAN-SWA_86

1078099 : 1080113

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000786734.1\|1078099_1079041_-	ATP-binding cassette domain-containing protein	F2Y1V6	Organic_Lake_phycodnavirus	1.6e-05	26.9
WP_000140050.1\|1079030_1080113_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-19	28.8

DBSCAN-SWA_87

1088708 : 1095518

Micromonas_sp._RCC1109_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000619365.1\|1088708_1089854_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	2.5e-05	26.0
WP_001047066.1\|1089963_1090833_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000353955.1\|1090891_1093501_-	ATP-dependent chaperone ClpB	A0A223W0B1	Agrobacterium_phage	5.5e-117	34.3
WP_001044214.1\|1093703_1095518_-	O-acetyltransferase	B5WZU0	Pseudomonas_phage	1.1e-36	33.9

DBSCAN-SWA_88

1100635 : 1104289

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203732.1\|1100635_1104289_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	1.2e-24	24.7

DBSCAN-SWA_89

1114443 : 1121602

Paramecium_bursaria_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185326.1\|1114443_1115373_+	glycerophosphodiester phosphodiesterase	M1HTS7	Paramecium_bursaria_Chlorella_virus	4.0e-17	28.7
WP_160203733.1\|1115875_1117120_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA
WP_000167314.1\|1117228_1118419_-	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	1.3e-33	29.7
WP_000838037.1\|1118726_1119854_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA
WP_001067294.1\|1120215_1120593_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000035058.1\|1121008_1121602_-	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	1.1e-25	41.3

DBSCAN-SWA_90

1131522 : 1135150

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001009697.1\|1131522_1132998_-	cytosol aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.9e-48	34.9
WP_000046076.1\|1133128_1134337_-	NADH dehydrogenase	NA	NA	NA	NA
WP_001143497.1\|1134790_1135150_-	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	2.1e-14	38.6

DBSCAN-SWA_91

1139193 : 1141862

Pseudomonas_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000613541.1\|1139193_1140408_-	PG:teichoic acid D-alanyltransferase DltB	A0A125RNP0	Pseudomonas_phage	8.5e-20	26.1
WP_000129653.1\|1140404_1141862_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	4.4e-39	28.3

DBSCAN-SWA_92

1154982 : 1158505

environmental_halophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000807671.1\|1154982_1156224_-	cysteine desulfurase	Q2XUY6	environmental_halophage	1.1e-110	44.5
WP_000205572.1\|1156338_1157646_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_000168845.1\|1157743_1158505_-	Fe-S cluster assembly ATPase SufC	A0A1V0SE00	Indivirus	4.4e-06	23.3

DBSCAN-SWA_93

1161991 : 1163017

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000571218.1\|1161991_1163017_-	methionine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.9e-26	33.3

DBSCAN-SWA_94

1166273 : 1171450

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000589549.1\|1166273_1166630_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	4.7e-19	46.6
WP_001190695.1\|1166773_1167094_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	3.1e-06	36.4
WP_000422908.1\|1167243_1167783_-	nitroreductase	NA	NA	NA	NA
WP_000150017.1\|1167865_1168582_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	3.0e-17	30.6
WP_000974460.1\|1168729_1169152_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000569884.1\|1169550_1170045_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000255561.1\|1170199_1170817_+	amino acid transporter	NA	NA	NA	NA
WP_001802951.1\|1170889_1171450_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	3.8e-31	40.4

DBSCAN-SWA_95

1174855 : 1176099

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001059082.1\|1174855_1175056_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.4e-20	70.8
WP_001548082.1\|1175412_1176099_-	thermonuclease family protein	A0A1P8CWK6	Bacillus_phage	3.8e-33	54.2

DBSCAN-SWA_96

1187733 : 1193884

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001085185.1\|1187733_1188198_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.5e-81	100.0
WP_001050064.1\|1188219_1190592_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.7e-94	39.2
WP_001165952.1\|1190625_1191366_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_000556760.1\|1191481_1191715_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_000785252.1\|1191781_1192240_-	hypothetical protein	NA	NA	NA	NA
WP_001121760.1\|1192579_1193884_-	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.7e-196	80.7

DBSCAN-SWA_97

1202941 : 1208876

Streptococcus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001049165.1\|1202941_1203529_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.2e-53	55.3
WP_000006551.1\|1204101_1205046_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	3.1e-54	40.6
WP_001248939.1\|1205155_1206151_-	YvcK family protein	A1IMD5	Streptococcus_phage	4.8e-53	41.9
WP_000369722.1\|1206147_1207059_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.1e-08	36.1
WP_000134963.1\|1207940_1208876_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.9e-84	49.2

DBSCAN-SWA_98

1213266 : 1216113

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000662681.1\|1213266_1216113_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	57.1

DBSCAN-SWA_99

1219431 : 1220271

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000749380.1\|1219431_1220271_-	CHAP domain-containing protein	A0A2H4J675	uncultured_Caudovirales_phage	3.5e-12	42.2

DBSCAN-SWA_100

1226349 : 1232060

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001548033.1\|1226349_1227432_-	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	1.3e-43	35.2
WP_000686342.1\|1227795_1228662_-	DegV family protein	NA	NA	NA	NA
WP_000192947.1\|1228805_1229447_+	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	4.0e-37	48.3
WP_000258151.1\|1229616_1230672_-	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_000460983.1\|1230989_1232060_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.3e-16	33.5

DBSCAN-SWA_101

1241342 : 1264793

uncultured_Caudovirales_phage(35.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000616842.1\|1241342_1242104_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	8.5e-18	31.6
WP_001245579.1\|1242100_1243057_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	1.2e-05	57.8
WP_000876321.1\|1243043_1244015_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	2.1e-138	78.6
WP_000499195.1\|1244053_1244209_-	hypothetical protein	NA	NA	NA	NA
WP_000562498.1\|1244610_1245582_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	4.2e-171	91.3
WP_000855505.1\|1245699_1247805_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	91.7
WP_000692521.1\|1247767_1248166_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	1.2e-52	72.0
WP_001068497.1\|1248966_1249833_+	DMT family transporter	NA	NA	NA	NA
WP_000930014.1\|1249852_1250353_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	5.9e-52	71.5
WP_000193751.1\|1250693_1252199_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	2.0e-58	32.2
WP_001790641.1\|1252276_1252378_-	hypothetical protein	NA	NA	NA	NA
WP_000429014.1\|1252468_1253386_+	lipid kinase	A0A1V0SBJ0	Catovirus	3.7e-07	22.0
WP_000197271.1\|1254008_1254551_-	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA
WP_000663022.1\|1254901_1255960_-	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	1.1e-20	27.3
WP_000180991.1\|1256199_1257714_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA
WP_000589260.1\|1257706_1258684_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.4e-25	33.3
WP_000983677.1\|1258905_1260687_-	DNA helicase RecQ	A0A2P1EM61	Moumouvirus	6.5e-77	37.0
WP_000525111.1\|1260698_1262582_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	2.0e-55	30.6
WP_000098285.1\|1262852_1264793_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	W6LM83	Streptococcus_phage	1.3e-110	39.5

DBSCAN-SWA_102

1267932 : 1277778

Pandoravirus(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001217785.1\|1267932_1269084_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	1.6e-23	35.7
WP_000604514.1\|1269067_1269661_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_160203738.1\|1270011_1270680_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.3e-65	57.1
WP_000941336.1\|1270681_1271101_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	6.3e-07	28.7
WP_001062972.1\|1271104_1271818_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	6.5e-52	43.5
WP_000637687.1\|1271916_1272501_+	hypothetical protein	NA	NA	NA	NA
WP_001093553.1\|1272780_1273221_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_001037807.1\|1273562_1274036_+	DoxX family protein	NA	NA	NA	NA
WP_000149344.1\|1274010_1274697_+	response regulator transcription factor	NA	NA	NA	NA
WP_000244412.1\|1274696_1275752_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.1e-14	30.0
WP_000702782.1\|1275823_1276807_-	glycosyltransferase family 2 protein	A0A192Y8W7	Salmonella_phage	1.5e-62	43.3
WP_000931237.1\|1276938_1277778_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.1e-56	42.3

DBSCAN-SWA_103

1289390 : 1290764

Bandra_megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000952048.1\|1289390_1290764_-	deoxyribodipyrimidine photo-lyase	A0A2K9V7Z5	Bandra_megavirus	5.6e-44	29.2

DBSCAN-SWA_104

1295741 : 1302021

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000857602.1\|1295741_1297415_-	amino acid ABC transporter ATP-binding/permease protein	W8CYL7	Bacillus_phage	4.5e-11	22.9
WP_000737143.1\|1297411_1299043_-	ABC transporter ATP-binding protein/permease	W5SAS9	Pithovirus	6.7e-12	27.8
WP_000469890.1\|1299261_1300137_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000358498.1\|1300308_1300992_+	hypothetical protein	NA	NA	NA	NA
WP_000148828.1\|1300994_1301453_+	YaiI/YqxD family protein	NA	NA	NA	NA
WP_000820892.1\|1301454_1302021_+	TIGR00730 family Rossman fold protein	A0A1G5S9X4	Enterococcus_phage	6.1e-21	36.9

DBSCAN-SWA_105

1308949 : 1309423

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000833483.1\|1308949_1309423_-	cupin	A0A291AU44	Pandoravirus	2.1e-14	39.4

DBSCAN-SWA_106

1314685 : 1315483

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000731644.1\|1314685_1315483_+	LysM peptidoglycan-binding domain-containing protein	A0A223LD43	Bacillus_phage	1.2e-06	30.2

DBSCAN-SWA_107

1320314 : 1321076

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000985996.1\|1320314_1321076_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-33	34.8

DBSCAN-SWA_108

1325450 : 1326494

Acanthamoeba_polyphaga_mimivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001030771.1\|1325450_1326494_-	alpha/beta hydrolase	A0A0G2YDK2	Acanthamoeba_polyphaga_mimivirus	2.0e-17	26.6

DBSCAN-SWA_109

1333016 : 1333814

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001080809.1\|1333016_1333814_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-18	30.7

DBSCAN-SWA_110

1337039 : 1340998

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000817954.1\|1337039_1338767_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.7e-110	43.3
WP_000793070.1\|1339187_1340483_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-14	26.9
WP_000832260.1\|1340599_1340998_-	glycerol-3-phosphate cytidylyltransferase	A0A222YWT0	Streptomyces_phage	3.2e-16	39.9

DBSCAN-SWA_111

1347932 : 1348676

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894464.1\|1347932_1348676_+	metal ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	1.2e-11	29.7

DBSCAN-SWA_112

1359826 : 1360387

Streptococcus_phage(100.0%)

integrase

attL 1353980:1353994|attR 1363976:1363990

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1353980:1353994	attL	NA	NA	NA	NA
WP_001044915.1\|1359826_1360387_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
WP_001044915.1\|1359826_1360387_-\|integrase	tyrosine-type recombinase/integrase	A0A141E172	Streptococcus_phage	5.7e-19	35.1
1363976:1363990	attR	NA	NA	NA	NA

DBSCAN-SWA_113

1363686 : 1364475

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_153154990.1\|1363686_1364475_-	alpha/beta fold hydrolase	A0A0B5A484	Mycobacterium_phage	2.9e-05	34.4

DBSCAN-SWA_114

1373458 : 1376812

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001200748.1\|1373458_1374469_-	alcohol dehydrogenase AdhP	A0A2K9L339	Tupanvirus	5.6e-33	27.3
WP_001788287.1\|1374967_1375489_-	hypothetical protein	NA	NA	NA	NA
WP_000180230.1\|1375516_1376812_-	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	2.1e-24	27.9

DBSCAN-SWA_115

1390361 : 1391684

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000860582.1\|1390361_1391684_+	FAD-containing oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	2.2e-109	47.3

DBSCAN-SWA_116

1402989 : 1403646

Elephant_endotheliotropic_herpesvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000455256.1\|1402989_1403646_-	uracil-DNA glycosylase	U5U4C1	Elephant_endotheliotropic_herpesvirus	1.1e-45	46.4

DBSCAN-SWA_117

1407287 : 1410608

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001100835.1\|1407287_1408664_-	long-chain fatty acid--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.9e-21	24.5
WP_000347061.1\|1409207_1410608_-	MFS transporter	Q6JIH2	Burkholderia_virus	9.4e-55	32.8

DBSCAN-SWA_118

1434035 : 1434698

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001067262.1\|1434035_1434698_+	deoxynucleoside kinase	A0A0M3UL55	Enterococcus_phage	1.4e-24	37.4

DBSCAN-SWA_119

1441277 : 1442465

Emiliania_huxleyi_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000250824.1\|1441277_1442465_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	7.5e-45	30.6

DBSCAN-SWA_120

1445493 : 1456447

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203740.1\|1445493_1447575_-	elongation factor G	E4ZFJ7	Streptococcus_phage	2.1e-66	28.3
WP_001137495.1\|1447697_1448168_-	30S ribosomal protein S7	NA	NA	NA	NA
WP_001142337.1\|1448233_1448647_-	30S ribosomal protein S12	NA	NA	NA	NA
WP_000031892.1\|1448744_1448999_-	50S ribosomal protein L7ae-like protein	NA	NA	NA	NA
WP_001788197.1\|1449135_1452732_-	DNA-directed RNA polymerase subunit beta'	R4TQM7	Phaeocystis_globosa_virus	3.3e-67	24.6
WP_000918667.1\|1452895_1456447_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.1e-50	24.3

DBSCAN-SWA_121

1460130 : 1464913

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288302.1\|1460130_1460679_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	8.6e-12	33.5
WP_001074473.1\|1460691_1460874_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_001788193.1\|1460929_1461073_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_000872873.1\|1461187_1461757_-	RNA polymerase sigma factor	NA	NA	NA	NA
WP_000664738.1\|1461837_1462362_-	NYN domain-containing protein	NA	NA	NA	NA
WP_000390328.1\|1462361_1463108_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000370182.1\|1463115_1463520_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_000631963.1\|1463512_1464913_-\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	3.2e-55	32.0

DBSCAN-SWA_122

1470924 : 1473381

Escherichia_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000897132.1\|1470924_1473381_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpC	A0A1C3S747	Escherichia_phage	1.4e-133	41.2

DBSCAN-SWA_123

1492162 : 1502434

Catovirus(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001288202.1\|1492162_1493650_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.1e-92	41.1
WP_001790128.1\|1493702_1493795_-	hypothetical protein	NA	NA	NA	NA
WP_000613716.1\|1494188_1494665_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_001154302.1\|1494661_1495027_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_000167924.1\|1495004_1495808_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.3e-21	29.3
WP_000057594.1\|1496023_1496956_-	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	3.7e-108	65.7
WP_000148605.1\|1497134_1498016_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_001167888.1\|1498244_1500338_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	E5EQ50	Micromonas_sp._RCC1109_virus	4.0e-110	42.7
WP_000551283.1\|1500594_1501134_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	6.5e-12	29.8
WP_001176715.1\|1501138_1502434_-\|tRNA	tRNA lysidine(34) synthetase TilS	A0A1V0SI91	Klosneuvirus	4.8e-13	24.5

DBSCAN-SWA_124

1511690 : 1514155

Hokovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000933774.1\|1511690_1512656_-	ribose-phosphate diphosphokinase	A0A1V0SHF7	Hokovirus	6.1e-45	35.4
WP_001252529.1\|1512802_1514155_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	8.3e-24	30.4

DBSCAN-SWA_125

1520037 : 1523135

Klosneuvirus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001051116.1\|1520037_1522011_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.2e-92	36.0
WP_000279926.1\|1522295_1523135_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-57	45.8

DBSCAN-SWA_126

1527041 : 1527659

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272126.1\|1527041_1527659_-	dTMP kinase	M1PSC7	Streptococcus_phage	9.2e-47	48.3

DBSCAN-SWA_127

1536793 : 1538491

Streptococcus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203742.1\|1536793_1538491_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	4.3e-54	42.0

DBSCAN-SWA_128

1555137 : 1561375

Lactobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001170264.1\|1555137_1556142_-	autolysin/adhesin Aaa	A0A0A7NU10	Lactobacillus_phage	1.6e-24	41.2
WP_000825521.1\|1556473_1557316_-	dipeptide ABC transporter glycylmethionine-binding lipoprotein	NA	NA	NA	NA
WP_000467994.1\|1557352_1558012_-	ABC transporter permease	NA	NA	NA	NA
WP_000569286.1\|1558015_1559041_-	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.2e-32	37.3
WP_001036663.1\|1559334_1560477_-	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA	NA	NA	NA
WP_000634105.1\|1560460_1561375_-	cysteine synthase family protein	A0A1W6JIM2	Lactococcus_phage	6.6e-49	39.7

DBSCAN-SWA_129

1587564 : 1590325

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000072584.1\|1587564_1588776_-	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	2.2e-44	35.2
WP_000028628.1\|1588768_1590325_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	6.8e-288	99.2

DBSCAN-SWA_130

1604027 : 1609477

Paenibacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159787.1\|1604027_1604300_+\|transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	1.3e-13	50.6
WP_000041883.1\|1604698_1605403_+	type II toxin-antitoxin system PemK/MazF family toxin	U5U4R0	Staphylococcus_phage	2.6e-29	37.6
WP_000551776.1\|1605795_1606332_+	hypothetical protein	NA	NA	NA	NA
WP_000424966.1\|1606444_1607986_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.2e-23	32.6
WP_000264071.1\|1608010_1609477_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	5.2e-96	40.5

DBSCAN-SWA_131

1618437 : 1619961

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000930486.1\|1618437_1619961_+	alkyl hydroperoxide reductase subunit F	A0A249XZT7	Enterococcus_phage	1.9e-40	33.6

DBSCAN-SWA_132

1626155 : 1634573

Staphylococcus_phage(66.67%)

integrase

attL 1623100:1623114|attR 1645452:1645466

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1623100:1623114	attL	NA	NA	NA	NA
WP_000237577.1\|1626155_1626314_+\|integrase	integrase	Q4ZE80	Staphylococcus_phage	6.7e-10	66.7
WP_001797636.1\|1626391_1626703_+\|integrase	tyrosine-type recombinase/integrase	Q4ZE80	Staphylococcus_phage	5.5e-24	70.5
WP_001822249.1\|1626741_1627680_+	Abi family protein	NA	NA	NA	NA
WP_000897044.1\|1627945_1628188_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_000934799.1\|1628239_1628743_-	single-stranded DNA-binding protein	A0A1W6JPL9	Staphylococcus_phage	1.2e-60	74.7
WP_001261460.1\|1628763_1629060_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_001052483.1\|1629303_1629495_+	hypothetical protein	U3PCX8	Staphylococcus_phage	4.9e-23	80.0
WP_160203746.1\|1629580_1630678_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_000157345.1\|1630689_1630893_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_001077602.1\|1630922_1631804_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_001550052.1\|1631960_1632806_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	1.6e-12	34.4
WP_000655692.1\|1633469_1634573_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	3.9e-11	28.0
1645452:1645466	attR	NA	NA	NA	NA

DBSCAN-SWA_133

1644491 : 1645334

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000209565.1\|1644491_1645334_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-12	27.2

DBSCAN-SWA_134

1666546 : 1669281

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000280803.1\|1666546_1667569_-	lipoate--protein ligase	A0A2H4UVX5	Bodo_saltans_virus	1.1e-09	29.7
WP_001191946.1\|1667546_1668491_-	NAD-dependent deacetylase	NA	NA	NA	NA
WP_000449060.1\|1668480_1669281_-	protein-ADP-ribose hydrolase	A0A2K9L8X2	Tupanvirus	8.9e-42	43.9

DBSCAN-SWA_135

1687509 : 1688187

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000911019.1\|1687509_1688187_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.2e-32	38.9

DBSCAN-SWA_136

1704234 : 1708674

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000549278.1\|1704234_1708674_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	8.2e-28	24.3

DBSCAN-SWA_137

1720637 : 1722299

Amsacta_moorei_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570071.1\|1720637_1721297_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	7.6e-23	37.2
WP_000736798.1\|1721348_1722299_-	glycine-glycine endopeptidase LytM	V5R8R0	Arthrobacter_phage	1.5e-16	42.7

DBSCAN-SWA_138

1731534 : 1732971

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000163988.1\|1731534_1732971_-	6-phospho-beta-glucosidase	A0A0B5JD41	Pandoravirus	3.7e-30	25.8

DBSCAN-SWA_139

1736731 : 1741271

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000925394.1\|1736731_1738471_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	1.5e-62	31.5
WP_000608826.1\|1738732_1739407_-	iron-sulfur cluster repair di-iron protein ScdA	NA	NA	NA	NA
WP_000975357.1\|1739546_1741271_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	2.1e-11	37.4

DBSCAN-SWA_140

1750598 : 1751642

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000645604.1\|1750598_1751642_-	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	4.6e-14	24.6

DBSCAN-SWA_141

1758849 : 1760379

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000838204.1\|1758849_1760379_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	5.3e-11	52.0

DBSCAN-SWA_142

1769254 : 1770760

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001008401.1\|1769254_1770760_+	acyl--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	3.5e-39	25.9

DBSCAN-SWA_143

1781831 : 1787190

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000894660.1\|1781831_1784081_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.7e-186	45.1
WP_000837105.1\|1784668_1785637_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_000127982.1\|1785633_1787190_+	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	5.8e-13	27.2

DBSCAN-SWA_144

1797400 : 1799459

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000818914.1\|1797400_1798498_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	1.4e-24	35.6
WP_000166917.1\|1798880_1799459_-	M23 family metallopeptidase	A0A2K9VGT1	Pontimonas_phage	9.7e-14	39.4

DBSCAN-SWA_145

1807994 : 1809587

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000067349.1\|1807994_1809587_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.4e-15	28.6

DBSCAN-SWA_146

1827747 : 1828932

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001084436.1\|1827747_1828932_+	ornithine--oxo-acid transaminase	A0A1V0SKB7	Klosneuvirus	9.2e-35	29.2

DBSCAN-SWA_147

1833768 : 1844052

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000605282.1\|1833768_1840944_-	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	1.0e-67	29.5
WP_000826862.1\|1841390_1842641_-	MFS transporter	NA	NA	NA	NA
WP_000706137.1\|1843026_1844052_-	NAD-dependent formate dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-29	33.9

DBSCAN-SWA_148

1847590 : 1850588

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000590853.1\|1847590_1848331_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.5e-38	41.1
WP_000171919.1\|1848672_1849185_-	DUF4242 domain-containing protein	NA	NA	NA	NA
WP_000356963.1\|1849363_1849567_+	hypothetical protein	NA	NA	NA	NA
WP_001013484.1\|1849628_1850588_-	cation transporter	A0A1V0SED0	Indivirus	1.2e-11	34.2

DBSCAN-SWA_149

1853943 : 1856428

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000723454.1\|1853943_1855089_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	2.4e-24	26.4
WP_000779497.1\|1855165_1856428_-	nucleotide sugar dehydrogenase	A0A127AXI2	Bacillus_phage	6.6e-23	26.0

DBSCAN-SWA_150

1863263 : 1869828

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413171.1\|1863263_1864388_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SJE0	Klosneuvirus	6.7e-128	59.6
WP_001028293.1\|1864391_1865501_-	capsular polysaccharide biosynthesis protein CapF	NA	NA	NA	NA
WP_000459054.1\|1865513_1866542_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	3.3e-41	35.0
WP_160203753.1\|1866531_1868355_-	polysaccharide biosynthesis protein	A0A1V0SAI8	Catovirus	5.2e-29	29.1
WP_000565302.1\|1868374_1869139_-	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_000037332.1\|1869141_1869828_-	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	3.7e-28	36.1

DBSCAN-SWA_151

1881108 : 1881882

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000078092.1\|1881108_1881882_+	phosphonate ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.8e-13	26.1

DBSCAN-SWA_152

1889917 : 1890517

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000874681.1\|1889917_1890517_-	Superoxide dismutase [Mn/Fe] 2	Q56AR7	Bacillus_thuringiensis_phage	7.6e-54	50.2

DBSCAN-SWA_153

1895454 : 1896435

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001789408.1\|1895454_1896435_-	NAD-dependent epimerase/dehydratase family protein	A0A1V0SAI6	Catovirus	1.0e-47	37.0

DBSCAN-SWA_154

1899805 : 1901008

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001223700.1\|1899805_1901008_-	staphyloferrin B biosynthesis decarboxylase SbnH	A0A2K9L4I2	Tupanvirus	1.1e-08	20.8

DBSCAN-SWA_155

1909274 : 1913484

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000570808.1\|1909274_1910255_-	2,3-diaminopropionate biosynthesis protein SbnA	A0A1W6JHY1	Lactococcus_phage	2.1e-40	35.6
WP_001045111.1\|1910485_1911478_+	staphyloferrin B ABC transporter substrate-binding protein SirA	NA	NA	NA	NA
WP_000924997.1\|1911493_1912489_+	staphyloferrin B ABC transporter permease subunit SirB	NA	NA	NA	NA
WP_000136636.1\|1912485_1913484_+	staphyloferrin B ABC transporter permease subunit SirC	A0A2H4IY97	uncultured_Caudovirales_phage	1.2e-14	27.5

DBSCAN-SWA_156

1950512 : 1951580

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000816129.1\|1950512_1951580_-	persulfide response sulfurtransferase CstA	A0A2H4PQR9	Staphylococcus_phage	3.5e-09	41.5

DBSCAN-SWA_157

1959172 : 1969184

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000088648.1\|1959172_1959973_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	4.6e-38	35.9
WP_001104172.1\|1960362_1961151_-	hypothetical protein	NA	NA	NA	NA
WP_001060154.1\|1961151_1962486_-	hypothetical protein	NA	NA	NA	NA
WP_000871607.1\|1962478_1964305_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.6e-30	31.3
WP_000101976.1\|1964317_1965019_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.5e-42	39.2
WP_000095327.1\|1966222_1967506_-	adenylosuccinate synthase	L7Y4J5	Megavirus	2.3e-68	34.6
WP_000375647.1\|1967783_1969184_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	5.4e-111	48.1

DBSCAN-SWA_158

1975871 : 1984910

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000884334.1\|1975871_1977158_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.7e-88	51.2
WP_000177464.1\|1977536_1979051_-	histidine ammonia-lyase	A0A1V0S940	Catovirus	6.8e-91	38.6
WP_000449218.1\|1979376_1980189_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_000819084.1\|1980275_1982939_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	2.7e-119	35.9
WP_000255584.1\|1982975_1984910_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	4.4e-143	44.9

DBSCAN-SWA_159

1994992 : 1998258

Faecalibacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000742837.1\|1994992_1995832_+	nucleoid occlusion protein	A0A2K9V477	Faecalibacterium_phage	2.2e-06	23.8
WP_000491382.1\|1996285_1996639_+	DUF3147 family protein	NA	NA	NA	NA
WP_000779136.1\|1996706_1997102_+	DUF3147 family protein	NA	NA	NA	NA
WP_001054118.1\|1997361_1997931_+	helix-turn-helix domain-containing protein	D2XQ11	Bacillus_virus	6.2e-05	33.3
WP_001059079.1\|1998057_1998258_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.4e-19	69.8

DBSCAN-SWA_160

2002558 : 2003317

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000154162.1\|2002558_2003317_-	peptide resistance ABC transporter ATP-binding subunit VraD	G9BWD6	Planktothrix_phage	9.0e-36	39.5

DBSCAN-SWA_161

2017574 : 2019287

Planktothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_160203757.1\|2017574_2019287_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-20	32.3

DBSCAN-SWA_162

2024916 : 2025930

Faustovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000639183.1\|2024916_2025930_+	histidinol-phosphate aminotransferase family protein	A0A1X7QHI1	Faustovirus	2.1e-08	22.2

DBSCAN-SWA_163

2038381 : 2039074

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000185864.1\|2038381_2039074_+	polysaccharide biosynthesis tyrosine autokinase	A0A1X9I5D6	Streptococcus_phage	1.7e-28	38.0

DBSCAN-SWA_164

2065175 : 2067035

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001125611.1\|2065175_2067035_-	amidase domain-containing protein	A0A249Y0X5	Enterococcus_phage	9.7e-15	37.3

DBSCAN-SWA_165

2092743 : 2094494

Ectocarpus_siliculosus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000143419.1\|2092743_2093631_+	sensor histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	2.5e-05	22.5
WP_000923760.1\|2093738_2094494_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-31	37.9

DBSCAN-SWA_166

2097914 : 2098412

Canarypox_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001065268.1\|2097914_2098412_+	glutathione peroxidase	Q6VZR0	Canarypox_virus	1.8e-21	33.1

DBSCAN-SWA_167

2103464 : 2105848

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001071717.1\|2103464_2105315_+	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.2e-235	64.3
WP_000601724.1\|2105311_2105848_+	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	8.6e-41	49.4

DBSCAN-SWA_168

2111693 : 2121807

Klosneuvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000066521.1\|2111693_2113403_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	3.8e-58	32.3
WP_000011688.1\|2113680_2113893_+	hypothetical protein	NA	NA	NA	NA
WP_000708242.1\|2114173_2114617_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_001172340.1\|2114810_2116409_+	acetyl-CoA synthetase	A0A2H4PQU7	Staphylococcus_phage	5.3e-78	36.8
WP_001791775.1\|2116468_2116798_-	hypothetical protein	NA	NA	NA	NA
WP_001130051.1\|2117093_2118590_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_053868499.1\|2118782_2119673_-	fructose bisphosphate aldolase	A0A0K0KVJ8	Prochlorococcus_phage	1.0e-06	28.6
WP_001237629.1\|2119795_2120212_-	hypothetical protein	NA	NA	NA	NA
WP_000030057.1\|2120469_2121807_+	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.0e-18	26.7

DBSCAN-SWA_169

2149358 : 2154530

Staphylococcus_phage(66.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001105940.1\|2149358_2150033_+\|transposase	IS6-like element ISSau6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.8e-113	87.9
WP_000751267.1\|2150743_2151445_+	lytic transglycosylase IsaA	Q4Z8Z7	Staphylococcus_phage	4.0e-38	46.4
WP_000996736.1\|2151720_2152209_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000379821.1\|2152718_2154530_+	O-acetyltransferase OatA	A0A1R3Y5Q6	Salmonella_virus	1.3e-35	31.5

DBSCAN-SWA_170

2162963 : 2166819

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161357.1\|2162963_2163962_+	D-lactate dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	2.6e-35	33.0
WP_000076661.1\|2164051_2164258_-	copper chaperone CopZ	NA	NA	NA	NA
WP_000024127.1\|2164410_2166819_-	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.9e-128	41.0

DBSCAN-SWA_171

2176060 : 2179096

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001058988.1\|2176060_2178166_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	3.1e-118	38.5
WP_000455987.1\|2178574_2179096_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	2.0e-26	41.1

DBSCAN-SWA_172

2186979 : 2193363

Yellowstone_lake_phycodnavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001062658.1\|2186979_2188719_+	pyruvate oxidase	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	2.7e-35	24.3
WP_000473675.1\|2189019_2191086_+	PTS glucoside EIICBA component	A0A2I7SAJ6	Vibrio_phage	8.3e-07	43.3
WP_000206033.1\|2191465_2191876_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_000240662.1\|2191917_2192262_+	thioredoxin family protein	NA	NA	NA	NA
WP_001228162.1\|2192394_2193363_+	alpha/beta hydrolase	A0A167RJ59	Powai_lake_megavirus	5.2e-12	26.5

DBSCAN-SWA_173

2202949 : 2203942

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000161536.1\|2202949_2203942_-	D-lactate dehydrogenase	M1HYB0	Acanthocystis_turfacea_Chlorella_virus	1.1e-36	31.5

DBSCAN-SWA_174

2213222 : 2213918

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000382904.1\|2213222_2213918_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	3.0e-38	38.0

DBSCAN-SWA_175

2234296 : 2235163

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000721336.1\|2234296_2235163_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.3e-78	52.6

DBSCAN-SWA_176

2242965 : 2248146

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001795457.1\|2242965_2244774_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	1.9e-95	38.1
WP_000755954.1\|2244890_2245283_+	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_160203767.1\|2245284_2248146_+	DUF3427 domain-containing protein	Q5YA94	Bacillus_phage	2.4e-28	27.9

DBSCAN-SWA_177

2254970 : 2255666

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000217466.1\|2254970_2255666_+	oxidoreductase	W8CYX9	Bacillus_phage	8.6e-09	36.5

DBSCAN-SWA_178

2269027 : 2270585

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000173869.1\|2269027_2269843_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-13	30.3
WP_000590516.1\|2269835_2270585_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.3e-20	30.4

DBSCAN-SWA_179

2277718 : 2282147

Organic_Lake_phycodnavirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000923520.1\|2277718_2278381_+	ATP-binding cassette domain-containing protein	F2Y2R6	Organic_Lake_phycodnavirus	6.5e-22	32.2
WP_000072147.1\|2278373_2279150_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_001802848.1\|2279554_2280733_+	MFS transporter	NA	NA	NA	NA
WP_000700921.1\|2280794_2282147_-	carboxylesterase/lipase family protein	A0A0B5J865	Pandoravirus	2.5e-12	34.2

DBSCAN-SWA_180

2285840 : 2287699

Mycoplasma_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000948981.1\|2285840_2287067_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	6.6e-20	50.5
WP_000569120.1\|2287063_2287699_+	ABC transporter permease	G3M9Y4	Bacillus_virus	9.0e-05	26.2

DBSCAN-SWA_181

2305426 : 2311613

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001176863.1\|2305426_2306569_-	glycerate kinase	W6LM47	Streptococcus_phage	5.3e-56	44.3
WP_000779358.1\|2306836_2307223_+	GtrA family protein	NA	NA	NA	NA
WP_000482650.1\|2307356_2307464_+	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA
WP_001064838.1\|2308091_2309855_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-36	24.9
WP_000486494.1\|2309879_2311613_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.0e-31	25.7

DBSCAN-SWA_182

2315073 : 2320845

Staphylococcus_phage(75.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000671751.1\|2315073_2316189_+	pyridoxal phosphate-dependent aminotransferase family protein	V5LQ39	Emiliania_huxleyi_virus	1.6e-20	24.7
WP_000286875.1\|2316199_2316892_+	6-carboxyhexanoate--CoA ligase	NA	NA	NA	NA
WP_000200948.1\|2316902_2317370_+	QueT transporter family protein	NA	NA	NA	NA
WP_000783428.1\|2317421_2318399_-	bi-component gamma-hemolysin HlgAB/HlgCB subunit B	A0A2H4PQH7	Staphylococcus_phage	7.1e-142	76.2
WP_000916713.1\|2318400_2319348_-	bi-component gamma-hemolysin HlgCB subunit C	A0A2I6PER8	Staphylococcus_phage	1.2e-138	77.1
WP_000594519.1\|2319915_2320845_-	bi-component gamma-hemolysin HlgAB subunit A	A0A2H4PQI5	Staphylococcus_phage	3.2e-120	71.1

DBSCAN-SWA_183

2328789 : 2329521

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000615461.1\|2328789_2329521_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-25	34.7

DBSCAN-SWA_184

2346169 : 2347729

Escherichia_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000692645.1\|2346169_2347729_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	4.4e-21	46.8

DBSCAN-SWA_185

2369147 : 2370182

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000655971.1\|2369147_2370182_+	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	5.8e-17	26.6

DBSCAN-SWA_186

2380041 : 2383938

Hokovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000477329.1\|2380041_2381415_-	heme sensor histidine kinase HssS	A0A1V0SGX0	Hokovirus	1.3e-13	29.8
WP_000249497.1\|2381407_2382082_-	DNA-binding heme response regulator HssR	W8CYM9	Bacillus_phage	3.6e-52	45.2
WP_000761395.1\|2382217_2383273_+	ABC transporter permease	NA	NA	NA	NA
WP_001229911.1\|2383272_2383938_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.2e-36	38.8

DBSCAN-SWA_187

2388517 : 2389726

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000999131.1\|2388517_2389726_+	multidrug effflux MFS transporter	S4TR35	Salmonella_phage	3.9e-33	26.3

DBSCAN-SWA_188

2401820 : 2402720

Brazilian_cedratvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000524836.1\|2401820_2402720_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.2e-16	29.2

DBSCAN-SWA_189

2410092 : 2410512

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000920239.1\|2410092_2410512_-	FosB1/FosB3 family fosfomycin resistance bacillithiol transferase	Q2LI91	Bacillus_phage	2.6e-37	61.9

DBSCAN-SWA_190

2416205 : 2417087

Diadromus_pulchellus_ascovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000730043.1\|2416205_2417087_+	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	2.2e-62	46.3

DBSCAN-SWA_191

2424965 : 2425601

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000285450.1\|2424965_2425601_+	HAD family hydrolase	A7J6N1	Paramecium_bursaria_Chlorella_virus	1.6e-09	27.1

DBSCAN-SWA_192

2439165 : 2443146

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011447058.1\|2439165_2439804_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JQU5	Staphylococcus_phage	2.6e-36	48.1
WP_000684141.1\|2440114_2441239_+	NAD(P)-binding protein	A0A2K9L3K5	Tupanvirus	5.5e-13	22.8
WP_000417016.1\|2441330_2442284_-	2-hydroxyacid dehydrogenase	A0A1V0SBV6	Catovirus	2.9e-31	28.9
WP_000737705.1\|2442645_2443146_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	2.0e-07	39.3

DBSCAN-SWA_193

2447062 : 2447866

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000717381.1\|2447062_2447866_-	CHAP domain-containing protein	A0A2R3ZXQ4	Staphylococcus_phage	9.3e-07	41.3

DBSCAN-SWA_194

2466844 : 2467450

Pithovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000913019.1\|2466844_2467450_+	ATP-binding cassette domain-containing protein	W5SAS9	Pithovirus	3.8e-13	30.6

DBSCAN-SWA_195

2479534 : 2482702

Leptospira_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000592303.1\|2479534_2482702_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	6.2e-62	21.8

DBSCAN-SWA_196

2506165 : 2507832

Anomala_cuprea_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000389662.1\|2506165_2506975_+	energy-coupling factor transporter ATPase	W6JKT0	Anomala_cuprea_entomopoxvirus	2.2e-19	30.0
WP_000155386.1\|2506971_2507832_+	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	9.7e-10	23.9

DBSCAN-SWA_197

2513261 : 2522491

Vibrio_phage(33.33%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000402465.1\|2513261_2514398_+\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2I7SAX5	Vibrio_phage	5.4e-08	27.0
WP_001549616.1\|2514526_2515933_+	hypothetical protein	NA	NA	NA	NA
WP_000655244.1\|2516486_2516669_+	hypothetical protein	NA	NA	NA	NA
WP_001797632.1\|2516650_2516890_-	hypothetical protein	NA	NA	NA	NA
WP_000130150.1\|2517122_2518787_+	acetolactate synthase AlsS	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	4.0e-44	25.7
WP_000186134.1\|2518823_2519528_+	acetolactate decarboxylase	NA	NA	NA	NA
WP_001549607.1\|2519891_2520317_-	MAP domain-containing protein	NA	NA	NA	NA
WP_000044363.1\|2520610_2521426_+	hydrolase	NA	NA	NA	NA
WP_001044432.1\|2521636_2522491_+	M23 family metallopeptidase	E5G070	Clostridium_phage	3.4e-07	41.4

DBSCAN-SWA_198

2525867 : 2528962

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001015500.1\|2525867_2526716_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.0e-44	39.2
WP_001549596.1\|2526935_2527061_+	hypothetical protein	NA	NA	NA	NA
WP_160203778.1\|2527322_2527931_+	DUF3885 domain-containing protein	NA	NA	NA	NA
WP_001791678.1\|2528023_2528185_-	hypothetical protein	NA	NA	NA	NA
WP_001549592.1\|2528221_2528962_-	NAD-dependent protein deacylase	A0A2I2L319	Orpheovirus	7.3e-14	29.4

DBSCAN-SWA_199

2535283 : 2536696

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000169220.1\|2535283_2536696_+	6-phospho-beta-galactosidase	A0A0B5JD41	Pandoravirus	5.0e-48	28.9

DBSCAN-SWA_200

2540656 : 2542219

Vibrio_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000792334.1\|2540656_2542219_+	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	25.2

DBSCAN-SWA_201

2554376 : 2555345

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000989091.1\|2554376_2555345_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4IY97	uncultured_Caudovirales_phage	1.3e-15	28.8

DBSCAN-SWA_202

2572874 : 2573783

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167867.1\|2572874_2573783_+	arginase	A0A1V0SJM8	Klosneuvirus	3.2e-27	32.0

DBSCAN-SWA_203

2577373 : 2584810

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001048287.1\|2577373_2584810_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	3.4e-18	23.5

DBSCAN-SWA_204

2591066 : 2593886

Paramecium_bursaria_Chlorella_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000334465.1\|2591066_2592872_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1H1Z3	Paramecium_bursaria_Chlorella_virus	2.0e-97	38.6
WP_000908177.1\|2593103_2593886_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-08	32.1

DBSCAN-SWA_205

2606549 : 2610381

Clostridium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000070866.1\|2606549_2606993_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	5.6e-38	53.7
WP_000160304.1\|2607113_2607824_-	purine-nucleoside phosphorylase	NA	NA	NA	NA
WP_001083311.1\|2608138_2608801_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_001242318.1\|2609079_2610381_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.7e-133	58.9

DBSCAN-SWA_206

2618319 : 2619930

Only_Syngen_Nebraska_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159960.1\|2618319_2619930_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.7e-146	49.6

DBSCAN-SWA_207

2627733 : 2635483

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000273356.1\|2627733_2628333_+	thymidine kinase	G3MBK1	Bacillus_virus	6.2e-32	42.9
WP_000460242.1\|2628333_2629410_+	peptide chain release factor 1	NA	NA	NA	NA
WP_000248735.1\|2629396_2630233_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_011447046.1\|2630265_2631363_+	threonylcarbamoyl-AMP synthase	A0A291ATS8	Pandoravirus	7.9e-41	35.6
WP_000697334.1\|2631359_2631779_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_000654185.1\|2631885_2632410_+	TIGR01440 family protein	NA	NA	NA	NA
WP_000120494.1\|2632436_2633675_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	8.2e-103	53.0
WP_000048712.1\|2633702_2634332_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_000723418.1\|2634355_2635483_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	1.0e-27	29.9

DBSCAN-SWA_208

2645887 : 2646283

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000932694.1\|2645887_2646283_+	single-stranded DNA-binding protein	A0A1J0MFK5	Staphylococcus_phage	1.3e-14	38.5

DBSCAN-SWA_209

2652453 : 2653101

Moumouvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001187629.1\|2652453_2653101_-	HD domain-containing protein	H2ED17	Moumouvirus	6.1e-09	27.0

DBSCAN-SWA_210

2660301 : 2661822

Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001178942.1\|2660301_2661822_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.0e-58	33.9

DBSCAN-SWA_211

2667509 : 2669537

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000546584.1\|2667509_2669537_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	5.6e-24	23.1

DBSCAN-SWA_212

2674687 : 2678072

Clostridium_botulinum_C_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000621175.1\|2674687_2675050_+	type II toxin-antitoxin system PemK/MazF family toxin	Q332J9	Clostridium_botulinum_C_phage	4.2e-07	32.8
WP_000390829.1\|2675399_2676401_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA
WP_001052491.1\|2676519_2676846_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_001190829.1\|2676847_2677327_+	anti-sigma B factor RsbW	NA	NA	NA	NA
WP_001041103.1\|2677301_2678072_+	RNA polymerase sigma factor SigB	A0A0A0RNH9	Bacillus_phage	1.3e-21	34.9

DBSCAN-SWA_213

2691755 : 2696479

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000094576.1\|2691755_2693285_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	5.5e-08	28.1
WP_000214557.1\|2693314_2694319_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_000196911.1\|2694455_2694710_-	ACT domain-containing protein	NA	NA	NA	NA
WP_000047820.1\|2694709_2696479_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	5.3e-63	30.1

DBSCAN-SWA_214

2700239 : 2714083

Moraxella_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159034.1\|2700239_2701265_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.9e-63	40.9
WP_000106330.1\|2701366_2702977_-	MutS family DNA mismatch repair protein	A0A0N9R0S5	Chrysochromulina_ericina_virus	3.3e-19	26.9
WP_001790685.1\|2703065_2703194_+	hypothetical protein	NA	NA	NA	NA
WP_000602074.1\|2703337_2705266_-	ABC-F type ribosomal protection protein	A0A2K9L0W2	Tupanvirus	2.4e-53	30.4
WP_001283612.1\|2705518_2706154_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_072353927.1\|2706508_2707537_+	YeeE/YedE family protein	NA	NA	NA	NA
WP_000581077.1\|2707596_2707821_+	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_001052270.1\|2708027_2709278_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	4.5e-40	31.2
WP_000790330.1\|2709460_2710411_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_000141414.1\|2710559_2712044_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	4.0e-19	25.6
WP_001253312.1\|2712040_2713000_+	carbohydrate kinase	NA	NA	NA	NA
WP_001790167.1\|2713187_2713295_-	hypothetical protein	NA	NA	NA	NA
WP_000688492.1\|2713366_2714083_-	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	2.3e-25	32.6

DBSCAN-SWA_215

2721184 : 2724662

uncultured_virus(50.0%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917289.1\|2721184_2721469_+	co-chaperone GroES	A0A221S386	uncultured_virus	4.7e-14	46.2
WP_000240645.1\|2721544_2723161_+	chaperonin GroEL	A0A240F779	uncultured_virus	3.4e-157	54.7
WP_000128898.1\|2723862_2724075_+	hypothetical protein	Q4ZE86	Staphylococcus_phage	1.1e-23	74.3
WP_001293058.1\|2724071_2724662_+\|terminase	terminase small subunit	Q4ZE85	Staphylococcus_phage	1.1e-97	95.8

DBSCAN-SWA_216

2732134 : 2752176

Staphylococcus_phage(97.22%)

integrase

attL 2734977:2734991|attR 2743668:2743682

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000791407.1\|2732134_2733190_+	bi-component leukocidin LukGH subunit H	A0A1X9IGW5	Staphylococcus_phage	2.8e-35	34.3
WP_000595324.1\|2733211_2734228_+	bi-component leukocidin LukGH subunit G	A0A2I6PER8	Staphylococcus_phage	1.1e-25	29.0
2734977:2734991	attL	NA	NA	NA	NA
WP_000857191.1\|2735346_2736384_-\|integrase	site-specific integrase	A0EWV2	Staphylococcus_phage	9.1e-180	100.0
WP_000825947.1\|2736442_2736907_-	hypothetical protein	A0EWV3	Staphylococcus_phage	1.1e-28	100.0
WP_000705248.1\|2737006_2737189_-	hypothetical protein	M9NSW6	Staphylococcus_phage	4.1e-27	100.0
WP_000591749.1\|2737392_2737734_-	hypothetical protein	A0A2I6PF04	Staphylococcus_phage	4.6e-56	100.0
WP_000759682.1\|2737739_2738672_-	ATP-dependent helicase	A0A2I6PEZ7	Staphylococcus_phage	5.7e-173	100.0
WP_001031454.1\|2738687_2739401_-	helix-turn-helix transcriptional regulator	M9NUL0	Staphylococcus_phage	1.2e-130	100.0
WP_061819782.1\|2739363_2739513_+	hypothetical protein	NA	NA	NA	NA
WP_001025404.1\|2739577_2739793_+	DUF2829 domain-containing protein	A0A0H3U4C7	Staphylococcus_phage	4.8e-35	100.0
WP_000128907.1\|2739781_2740111_-	hypothetical protein	M9NS98	Staphylococcus_phage	2.7e-53	100.0
WP_001148605.1\|2740161_2740914_+	oxidoreductase	M9NTH5	Staphylococcus_phage	1.1e-139	100.0
WP_001148862.1\|2740929_2741127_+	hypothetical protein	O80075	Staphylococcus_phage	3.5e-24	87.7
WP_000762521.1\|2741113_2741494_-	DUF2513 domain-containing protein	Q9T1Z5	Staphylococcus_phage	1.2e-68	100.0
WP_001120201.1\|2741548_2741872_+	DUF771 domain-containing protein	A0A075LYF5	Staphylococcus_phage	3.0e-57	100.0
WP_000048129.1\|2741868_2742030_+	DUF1270 family protein	A0A1P8L6G0	Staphylococcus_phage	1.9e-20	100.0
WP_000165371.1\|2742124_2742427_+	DUF2482 family protein	A0A1P8L6F8	Staphylococcus_phage	7.0e-48	100.0
WP_000291510.1\|2742431_2742692_+	DUF1108 family protein	A0A1P8L6F5	Staphylococcus_phage	5.2e-44	100.0
WP_001205732.1\|2742700_2742964_+	hypothetical protein	A0A2I6PDG2	Staphylococcus_phage	7.7e-43	100.0
WP_000700555.1\|2742972_2744916_+	AAA family ATPase	S4V9K6	Staphylococcus_phage	0.0e+00	100.0
2743668:2743682	attR	NA	NA	NA	NA
WP_160203783.1\|2744917_2745838_+	recombinase	A0A2I6PDH5	Staphylococcus_phage	8.6e-166	99.7
WP_071665632.1\|2745918_2746536_+	MBL fold metallo-hydrolase	A0A0H3U2T4	Staphylococcus_phage	4.1e-87	100.0
WP_000934760.1\|2746536_2747007_+	single-stranded DNA-binding protein	A0EWX3	Staphylococcus_phage	7.4e-81	99.4
WP_000148321.1\|2747036_2747930_+	DnaD domain-containing protein	A0A2I6PDG7	Staphylococcus_phage	5.5e-141	99.3
WP_000338530.1\|2747936_2748155_+	hypothetical protein	A0A2I6PDG4	Staphylococcus_phage	1.0e-37	100.0
WP_000401960.1\|2748163_2748568_+	RusA family crossover junction endodeoxyribonuclease	A0EWX6	Staphylococcus_phage	1.9e-72	100.0
WP_000101288.1\|2748580_2748949_+	hypothetical protein	A0A0H3U2T3	Staphylococcus_phage	2.0e-49	100.0
WP_000131370.1\|2748952_2749195_+	hypothetical protein	Q4ZDP7	Staphylococcus_virus	2.1e-39	95.0
WP_001065094.1\|2749209_2749458_+	DUF1024 family protein	A0A075LYF1	Staphylococcus_phage	4.1e-38	97.6
WP_001066447.1\|2749450_2749987_+	hypothetical protein	A0A0H3U2Z8	Staphylococcus_phage	7.2e-96	100.0
WP_001282074.1\|2750023_2750269_+	hypothetical protein	A0A2I6PDW7	Staphylococcus_phage	5.0e-36	100.0
WP_000195803.1\|2750265_2750472_+	DUF1381 domain-containing protein	A0A0H3U2R7	Staphylococcus_phage	1.3e-29	100.0
WP_000592207.1\|2750468_2750855_+	hypothetical protein	W5R986	Staphylococcus_phage	3.0e-64	100.0
WP_000595265.1\|2750851_2751001_+	transcriptional activator RinB	A0A1W6JPZ2	Staphylococcus_phage	4.8e-18	100.0
WP_000265043.1\|2751000_2751201_+	DUF1514 domain-containing protein	A0A2I6PDV9	Staphylococcus_phage	1.4e-28	100.0
WP_000590122.1\|2751228_2751645_+	hypothetical protein	G4KNP7	Staphylococcus_phage	1.3e-76	100.0
WP_000988336.1\|2751876_2752176_+	HNH endonuclease	A0EWY8	Staphylococcus_phage	4.6e-52	100.0

Anti-CRISPR protein detection

Acr_ID: NZ_CP047849.1|WP_001790641.1|1252276_1252378_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP047849.1|WP_001790641.1|1252276_1252378_-|hypothetical-protein

1252276_1252378_-

33 aa aa

1241342-1264793

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP047849_2	Orphan	2.4\|1115670\|26\|NZ_CP047849\|CRT	1115670-1115695	26	1244420-1244445	2

1. spacer 2.4|1115670|26|NZ_CP047849|CRT matches to NZ_CP047849 position: 1244420-1244445, mismatch: 2

ccgccagcctctgtgttggggccccg	CRISPR spacer
ccgcctgcttctgtgttggggccccg	Protospacer
***** **.*****************

2. NZ_CP047850

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

14332 : 23905

Staphylococcus_phage(57.14%)

integrase,transposase

attL 3837:3860|attR 24012:24035

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3837:3860	attL	NA	NA	NA	NA
WP_012816637.1\|14332_14941_+	recombinase family protein	G8I4U3	Mycobacterium_phage	1.0e-13	28.7
WP_000358995.1\|15131_15527_-	thioredoxin-dependent arsenate reductase	A0A2H4PQT9	Staphylococcus_phage	8.5e-62	86.3
WP_000153629.1\|15544_16834_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	1.7e-188	81.8
WP_000120606.1\|16833_17148_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	A0A2H4PQT4	Staphylococcus_phage	1.6e-39	74.0
WP_000633164.1\|17208_17544_-	recombinase family protein	NA	NA	NA	NA
WP_001035802.1\|17863_18076_+	hypothetical protein	NA	NA	NA	NA
WP_001105940.1\|18110_18785_-\|transposase	IS6-like element ISSau6 family transposase	A0A0N9RU54	Staphylococcus_phage	4.8e-113	87.9
WP_160203788.1\|18851_19418_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	3.8e-39	49.7
WP_160203789.1\|19617_21723_-	AlwI family type II restriction endonuclease	NA	NA	NA	NA
WP_012816642.1\|21772_23905_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1W6JN66	Lactococcus_phage	1.2e-61	43.2
24012:24035	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047849

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

2. NZ_CP047850

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection