CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP039846	Acetobacter pasteurianus strain CICC 22518 chromosome, complete genome	3 crisprs	csa3,DEDDh,cas3,DinG	0	1
NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	6 crisprs	DEDDh,cas1,cas3-cas2,cas3f,cas8f,cas5f,cas7f,cas6f,cas6e,cas5,cas7,cse2gr11,cas8e,c2c9_V-U4	65	0
NZ_CP039847	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-2, complete sequence	0 crisprs	csa3	0	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP039846_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039846_1

529706-529803

Orphan

Consensus_repeat	Method
TCCCACACACCGCCTTTAGTGGTATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039846_1

>merge|NZ_CP039846|1|529706-529803|CRISPRCasFinder
TCCCACACACCGCCTTTAGTGGTATCCGATGTATCCGGATCTTCCACCTTTACCTTCCTGTCTGTCCCGCCATCCCATACACCGCCTTTAGTGGTATC

>NZ_CP039846|1|1|529706-529803|CRISPRCasFinder
TCCCACACACCGCCTTTAGTGGTATC	CGATGTATCCGGATCTTCCACCTTTACCTTCCTGTCTGTCCCGCCA
TCCCATACACCGCCTTTAGTGGTATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039846.1\|WP_160256329.1\|533062_534598_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271184
NZ_CP039846.1\|WP_035362011.1\|543054_544557_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676
NZ_CP039846.1\|WP_004448887.1\|525877_527248_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP039846.1\|WP_160256331.1\|539607_542025_+\|DUF3772-domain-containing-protein	unknown	unknown	gnl\|CDD\|225803
NZ_CP039846.1\|WP_160256325.1\|517294_519217_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP039846.1\|WP_160256326.1\|525116_525848_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP039846.1\|WP_003628465.1\|520411_521125_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP039846.1\|WP_004448902.1\|516034_516322_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160256324.1\|516940_517270_+\|DUF1653-domain-containing-protein	unknown	unknown	gnl\|CDD\|377930
NZ_CP039846.1\|WP_003628460.1\|516331_516949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160256332.1\|542085_542874_-\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP039846.1\|WP_012812645.1\|514996_515962_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236971
NZ_CP039846.1\|WP_004448875.1\|534851_536243_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP039846.1\|WP_160256330.1\|536327_537359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003629137.1\|538349_539138_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224052
NZ_CP039846.1\|WP_160256327.1\|530499_531177_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP039846.1\|WP_003629138.1\|537567_538353_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223838
NZ_CP039846.1\|WP_003628464.1\|519434_519869_-\|DUF4148-domain-containing-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160256328.1\|532323_532875_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003628469.1\|527317_528913_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039846.1\|WP_160256329.1\|533062_534598_-\|hypothetical-protein	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	4.63516e-25
NZ_CP039846.1\|WP_004448887.1\|525877_527248_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	2.86452e-124
NZ_CP039846.1\|WP_160256324.1\|516940_517270_+\|DUF1653-domain-containing-protein	gnl\|CDD\|377930	pfam07866, DUF1653, Protein of unknown function (DUF1653). This is a family of hypothetical bacterial proteins of unknown function.	1.34435e-23
NZ_CP039846.1\|WP_004448875.1\|534851_536243_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP039846.1\|WP_160256331.1\|539607_542025_+\|DUF3772-domain-containing-protein	gnl\|CDD\|225803	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	1.9385e-68
NZ_CP039846.1\|WP_160256325.1\|517294_519217_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP039846.1\|WP_160256326.1\|525116_525848_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	1.83117e-14
NZ_CP039846.1\|WP_003628465.1\|520411_521125_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.88984e-46
NZ_CP039846.1\|WP_003629138.1\|537567_538353_+\|ABC-transporter-permease	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	2.59095e-75
NZ_CP039846.1\|WP_003629137.1\|538349_539138_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224052	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	6.59387e-119
NZ_CP039846.1\|WP_160256332.1\|542085_542874_-\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	6.11291e-24
NZ_CP039846.1\|WP_012812645.1\|514996_515962_+\|hypothetical-protein	gnl\|CDD\|236971	PRK11760, PRK11760, putative 23S rRNA C2498 ribose 2'-O-ribose methyltransferase; Provisional.	5.4327e-17
NZ_CP039846.1\|WP_160256327.1\|530499_531177_-\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	1.12388e-31
NZ_CP039846.1\|WP_035362011.1\|543054_544557_-\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0

>NZ_CP039846.1|WP_003628469.1|527317_528913_-|hypothetical-protein
MSNSFVRHARSHATSVCRGSRGFVKASCSLVALGLAAFAAPEEVRAEQTLVSIKGITLQGALDIGGSAFFLPNTNFGAGSYGTKSSGALVRHKNSTYGEFYGKPMLMGSWQTGWGFTVIGKASAIGATTLGDGDAEEVSQTSGTPRSIYLEEANLGVEVPLKMAGGHQILTVQGGRQAFAVDDGFLIGKGTYSAGDRGAWWYAPRYAFSGPGVIKLEGDSVRGDVFMLESNSDNDIDRGYDRPKTKFVGFDVSWFKNKPGGHGGSTYADRAAYVTLTYFHVRDADGSSHYDYSTRADRNGMNVAALSWGGTLFPVKALGISKNFTFYGNFVSEQNSHAGNGYKSVEAYGMFFEPGYTFSMLPWKPHLFYRYTRFGGGKNAEGSVKRNYDTFFLYDGKRYTYGGYWPGEIVGMYLAPLSDLEVHQFDLTGTPPVHLFRKKDELKLGVHFYDLSLLYPSGMGLKNVGRHVSNEVDFTAEYMLDETTSAAVAAGTAFSGPAGRALSRAGVPTGYRMHNIGRHAGVLEAYFYKHF
>NZ_CP039846.1|WP_004448887.1|525877_527248_-|amino-acid-permease
MPEPTTLPAGKPADGLRNRHIAMIALGGTIGAGLFVGSGAAIAATGPAVLLAFLLVGFLVILVMRMLGEMVVADPGRGSFVEYIRAAHGDKVGFTAGWLYWFFWVVVLGSEAIAGAILLQDWVHLPVWLLSVVLILVLKLINFAAPRVFGECEFWLSAIKVFSIIAFIAISLLYAAHVFGPGVSVKENLLGHGGLFPHGVVALLSIIPTILFTMMGSEIATVAAAESPEPGKNVARVTRSLGRRITLFYVAAVGMILIVVPWTNIVAGKSPFVAAMDVMGVPGAGLLMRIVVLSAILSCLNSAMYITSRILTELAAQGDAPGFLARSSAAVVPRKAIIVSSLAGTLVAFSSILAPGTIFAFLLSCSGGVILLIYSLIVTSYIVTRRAARQAGTEAENYTLPLFPLCNYVTLAGVVLVFVAMLLNPSERMTALATMGSSVVCYLMAVYFATNNKKAG
>NZ_CP039846.1|WP_160256326.1|525116_525848_+|DUF1275-domain-containing-protein
MRIKPLFSFFFFRGEIMTARTGHDAKLVIAILMVTMAMGMLDAISLLHLKIFAGYMTATIILMAVNIATSQAIVLSGLEAIACYFTGAIIGGRLVRRERHTRLVVGDILLGVGCLVGLAAFVWCAQLRGGIYITLGMLSLAMGLQTSATRHAKLPDMVLPAATMVLHGLAHNSTVAGGTNSGTWRRLAAIASLFVGAVIGTLVSDKNVGIGIAAAGATVFAAGGLLHWRRHPLALHLDKMSIP
>NZ_CP039846.1|WP_003628465.1|520411_521125_+|GntR-family-transcriptional-regulator
MLPASLFAKTEITGHGTASEAICDALRRAILEDQIQPGQPLPQSELASGFGVSIIPVREALKHLEAEGLVTFMPNKGAMVIGMNESDILEYSQIRAILEERAAAEGVRNMTRVDFARVEDAYEAFVEGVHGPSGRIRSGALNRAFHNSIYASARSPRLLEMIEDLHVRLDRYIRGHLVIEGRKDITDLEHKAILDACRNRDADLCAKLTRAHILEAAAISIDVFRSRKAAKTAATGT
>NZ_CP039846.1|WP_003628464.1|519434_519869_-|DUF4148-domain-containing-protein
MKLIAVRALSALALTTSLLAGAAVSAHAQENTDAPVTRAGDTSRLTDVDPSGFVGSIDPAENAGLLNYCVQNEYVDYDDGWRTLQEYNKKTNAVPEGQEGNMSYANGSAGLLHANNRTYTIAMAILPVRQKTCKAVLERAKASL
>NZ_CP039846.1|WP_160256325.1|517294_519217_-|acetate--CoA-ligase
MVDAFFPATDNPVSDRYQDLVQRAQRDPEEFWLAQAQRLAWHTQPMHASRSDFTGDVRISWYEDGRLNAAENCLDRHVLYQPDNAALIWQGQEDGHREVLSYRELHARVCRLGNVLRRLGVKKGDRVAIHLPMVAEGVISMLACARIGAVHVVLFGGFSAEGLAERLTDSGAVVVITADVARRGPKKIPSKTTMDEAIKLCGAQSAVRNVLVVPVTGADVPMQKGRDLSYTAEVALEIPDCPPEVMNACDPLFLLYTSGSTGRPKGLVHSTGGYLVWASFTQELVFDAKPSDVFWCTADTSWITGHTYVVYGPLVNGGTILVYEGLPSWPQPGRWWDVIDQNQVSVFYTSPTVIRAAMREDDSVVQSRSLSSLRVLGTVGEPISPEAWKWFYAEVGRNACPVVDTWWQTETGGVMITACAQNVAGKPGAAGLPLPGVAATLTDTKGQDIEGEGEGLLCLAQSWPGQAMTLWQDHERFRKTYFTTCPGHYFSGDGARRDATGYYWITGRVDDVVNVSGHRIGTAEIEDAVAEDHAVVESAAVGVPHDLKGQALVVFVVPKAEGAFDATAVNKAVAAGVGRYAVPEKIYVVPDLPKTRSGKIVRRLLRKIAANDLENMGDLSTLADPDIVAELIKLVAQQNG
>NZ_CP039846.1|WP_160256324.1|516940_517270_+|DUF1653-domain-containing-protein
MVQKCAPSATQDHNLPQQDTPIMIEHNQNNTDTQVPEMPCPGLYKHYKGGLYTVICTGRHSETEEWLVTYRSEARGDYWVRPLAMWQESVNGVLRFALLKAANAAETGA
>NZ_CP039846.1|WP_003628460.1|516331_516949_-|hypothetical-protein
MNHRVVLCQALTGFMFLFCVNPGHATTTGHAKTHAHTSKRTHHAAAAARSPAGGAPVVLTSQPGTSLDKEARRLNAEDMAAAARHKERPLVLIGSAPLSTSGGSMALFVQVQSASLCGSAGCSTDVYLKRGNDWDKILDSVSGPIELMSTSHGGMKDIVVDGTDRWVWKNNTYVDTIVAQDVPGLKDSIEQHQAQMRKHGKSSSR
>NZ_CP039846.1|WP_004448902.1|516034_516322_-|hypothetical-protein
MPAPQPGLAYTALKTLATVAITVVLIALLRGGLALLPKFDSATGGQVGTHLLQLLAGDGQARTQNAVSIGLMLGCFILAVLLVQVLEKWWRRRAR
>NZ_CP039846.1|WP_012812645.1|514996_515962_+|hypothetical-protein
MSTIRTAWLAADGLTSVLEADLAWRGVTIDRWHGRLALSSSKPVYSPWALDIWLDPQVTEITSIRNAADTLRAIQRNWSLYTIDHFRRTALITDKLPPVKAAPLVFPTLPPTSPLGAWTLLDTNTLLFSARKTSPFVNGAPQFVENRTGPPSRAYLKLWEACTRLGRWPTPEERCYDLGATPGGWTWAIANLGAQVTAFDRAPLDPKVAAMPGVSFQQASAFGLEPEKLPAVDWMFSDIIAYPQRLLRLTQNWIASGNTDNIVLTVKFQGETDHEIVAAFEAIPGGSLAHLAHNKHELTFFWNKTAAAENRPTLAGTNLTQ
>NZ_CP039846.1|WP_160256327.1|530499_531177_-|recombinase-family-protein
MRDLPTFVTYLRVSTQRQGQSGLGLEAQKKAVQDYAASSGGKVLAEFVEVESGKRNDRPQLTQAMQRCRLTGAVLLIAKLDRLSRDAHFLIGLEKAGVEFVAADMPHANRLTVGIMALVAQQEREAISARTKAALAAAKARGVKLGGYRGGPALNPAEGTQAASEARRKAAQGFAEQVGPMVKELTGQGLSLRQVAAKLTEQGIRTARGGKVWTAAGVSRVMMRI
>NZ_CP039846.1|WP_160256328.1|532323_532875_+|hypothetical-protein
MHTEASHNHHDTLKAPSTAPKPHRKKRADAGKPQGPKKPHAPSKTIALDNGTTKVSLQGRHGNGKHLLVSTQDLPDLLSFSDNGIRLHVVNNGTGRPYVSIHGHKAQAWKHSSNPKDLLTVARFLVGETHGGRRITFKDHNPFNCTRDNLEVLVPAIEQTFTIDWEKAEAARHAKAAQAQKAL
>NZ_CP039846.1|WP_160256329.1|533062_534598_-|hypothetical-protein
MLKRGNSYSVRFNVPEDRRADVGKVFGAKSGMKDEIVRTLGTRDYREAVKRRDAALEAIRKEVNAKLTDANLPPLHGDYVPNWWAAPEKAVEAGLHYKKQIDQASEAYEPCEGIVPGTIAEGAPTSEKEHIRAVVADLVLEASEKLPPAEGLRYYNTVMGIAEGQETPLEPLAERWLADARRLVSNGLLKRHRRVLTIFWKYLDSVGVARVVQKVDKRQARRFREWLIAKGKEANTVNSYLSSLRSFWTWLDDAGEVSDSNPWSGMSGGLKKLAKRDAKARGEKRPFTDDELLLLLKGQPSSRQRAQMIKDVFRLGLLTGARQNELCSLTRGRVVVPADPAELWGVEVTEDVSKTENSVRTIPLHPLAREIVERRLKDCTSPLADDLDAPLFPECPPGGEDNKRGWTFSKDFLRYRKAVLGAEGNGTDFHSTRRCFSTFMEVARANGVTACTDLVIDHLIGHKAERLAANTYAAKQLDWSLYSEAILGMVEKGMSEKVRAAMLDESQKEAR
>NZ_CP039846.1|WP_004448875.1|534851_536243_-|DNA-repair-protein-RadA
MAKKPSRTYVCTNCGAVHAKWAGQCDACGEWNTLEEMAVEPLAASSAAVRGGKGRRVALQALEGEIKLPPRTQTGIAELDRVLGGGLVPASVVLVGGDPGIGKSTLLLQAASKLAGKGERVLYISGEEAVDQIRLRAQRLGVAGAKLDLAASINVADIVATLEAEPDVRAVVIDSIQTMWLETIDSAPGTVSQVRACAFELIRAAKRRGFSLILVGHVTKEGALAGPRVLEHMVDAVMYFEGDRGHQFRILRAAKNRYGATDEIGVFAMTDRGLEEVSNPSALFLAERRGNIAGSAVFAGLEGTRPVLLEVQALLAPKGGDGAPRRAVVGWDTGRLSMLLAVLETRCGLKLSGMDVYLNVAGGLKVAEPAADLAVAAALVSAASGVPTSPGEVYFGEVGLSGEVRQVAQADARLKEAAKLGFDRAVLPRRIARGNTRSRPPEGLHLREIGHISDLVSAEMEAE
>NZ_CP039846.1|WP_160256330.1|536327_537359_-|hypothetical-protein
MDDVSRSVFVFGSPCNSNYGKVVFLPNGQLYGYQHENEHTWRMDGEELCLLNIQGQVSSRYHRTGNGWAGTVEDRRYPLYLNTLITTDTCETPGLPPVMVNTIPKAGTYYVEAALKAAGCPSHRLHLGGEDVVDDYRGLPDERVHIMPETLRLYCPLDLVTATLQGGHVVAHCDFQHVIDHVRSQGILVLSVVRNLRDIMKSMFRFLLYMIPPEPDDFLGQFWREQEGDARVTAFLAVEHERGLEHVRQMARMILADTSPQSIVLRYESLKQGDLQPHNIEKLQAINPEFTQRLSDAFVQTYGARTPTFSGEARQQPDPWCDVFEAYFHKSGMADLNAQLGYA
>NZ_CP039846.1|WP_003629138.1|537567_538353_+|ABC-transporter-permease
MDMVLDLVARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTFLETGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSATTAAVVAASIMLLAFDYLLTDLFFSQ
>NZ_CP039846.1|WP_003629137.1|538349_539138_+|ATP-binding-cassette-domain-containing-protein
MSQTMTGTTPKIRIRDLHKSFGAKKVLDGVSMDVAQGTSFVVIGGSGSGKSVLLRCILGLITPDSGVIEIDGENVLEAPEKRREKLRSEIGMLFQNAALFDSLTVWENVTFGLLALHKITRKNARNHAGTILAQVGLDPSVGDLYPSELSGGMQKRVGLARAIAAQPDILFFDEPTTGLDPIMGAVIDGLIVDCVKKLGSTAIAITHDMASAQRIGDEAAMLYKGKLIWQGAASSLMNSGNPYVDQFTHGRREGPISMELRR
>NZ_CP039846.1|WP_160256331.1|539607_542025_+|DUF3772-domain-containing-protein
MRLKRFCSLFLACFVLTQGALLFATPSPLLAADTENTSVTTPAPTTLITNTSDIVSNSTLESIGSEISAIYQSSQQERTNGQSTTELAALLRRANAVATQTDTLQARLKPYQAVYQNFLDILGKPPGKDEPAEAASITEQRKLLLKKQQDINSRMTRLKLYQVEAQQLVNELRQHGTAIQQATLWQRFPSPLGVNFWSQFTSNFHTDTTRLSALGGEALGVLGVAFSGKRIFISLGGIALSALLLVGWFFSHGIIRRLVARVLPAGRIRPIIATLLCGVLSLLAWGFAFQIFWSVLAFDNSALDEDLTTLGSMMGAQFPLCGLVIELGFCLLSRHPEWRIFPMSDTIARNLRLFPLWLAAALIMRGFLRYIDTQSGISMLSVQLMDGLYVLAVSPLLFVIPQELRISDQTDNTPSQPSRTQFLISLAMGISIVCWLAVFTGYIPLAYTIISWLSMMAISMTGLLLLSLLVTVTASTLFPAGAPLGRHLVELGLPPRFVNQMCVVVPGIVNVLLLAVVYAVATSGGGFDPQQIWHQLYWLFHGQASTDGSHISLDAILLCAVLPVAGYYAISILKSWFQQRFFPITRLDIGAQASILSILSYAAWILVGLSMLAVLGVTVKSMTWVVSALSVGIGFGLQSIVQNFVSGIILMAERPVSIGDVVTIAGVTGTVERISVRSTDIRLDDQSTMIVPNSQFITSAVKNATRAQKPGVFTIELNLPFASDLDKAMDVMARTLATCKDVDESMRPTVSMSSVSDGSALLIGSAKAMSGTDVKVVRSAALFEIWKAFQENKIPVTVRQNLITV
>NZ_CP039846.1|WP_160256332.1|542085_542874_-|NERD-domain-containing-protein
MDKLGAIIAMAVCLLVLLNISTVFAFLFLLVKIALVVGLLALAGFLVFGFIEKPEKHLPPPLAPQDETPAEPVFEKPYFDAHEKGREGEEKVCAILQHMGWPALHNVLLEDDRGLTEIDHLVKAPWGIVVIETKNYDGFISGSSTPGVWKQSFPNSTGVGYRLFMDPVHQNYRHVCAVKYLTGMENVRSVVVFAGRAYTSPFVHHQVVRLKNLERVLRTRPEGFAYVDDRELERAWHVLQQASIANTGRGREHIDKLRQRFS
>NZ_CP039846.1|WP_035362011.1|543054_544557_-|replicative-DNA-helicase
MTTTDTPNQKDESLLALTLRQPPANVEAEQALLGALLTNNRAYDRVSDFLAGEHFANRVNGQIYEAIARRIENGQLADPVTMRAELEHSGILASVGGMAYMAKLLSSMVGIINAGDYGRTIHDAWIRRQLIDIGENVVNSAFGTTMGLSGQDQIEAGEEALFKLATEKGNEGDFVSFNKALSGAISVAAQAFQNEGHVTGLTSGLRDLDKKTGGLHPSDLLILAGRPAMGKTALATKMAFSAARAIMDEAEETGEKPKGAVAIFSLEMSAEQLATRILSEQAEVSGERIRRGDIGQKEFDRFVRVSHELARLPLVIDDTPAISLSAMRTRCRRLKRTQGLCLVVVDYLQLMRPSVGTRPESRVLEISMITQGLKAIAKELEVPVIALSQLSRQVESREDKRPMLSDLRESGSIEQDADAVMFVYRDEYYLQQRMPKETAFESMEKYSVAMDEWQRKMSLVHNKAELILEKQRHGPTGTINLFFEGEYTRFADLDTIHQEH

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Crispr_ID: NZ_CP039846_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039846_2

532075-532161

Orphan

Consensus_repeat	Method
AAGCCATAAAGACACCCAGCAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039846_2

>merge|NZ_CP039846|2|532075-532161|CRISPRCasFinder
AAGCCATAAAGACACCCAGCAAGATGGTATAATGCTGAAGCATAAATAATGCTATTTGGTGTTAATCCATAAAGACACCCAGCAAGA

>NZ_CP039846|2|2|532075-532161|CRISPRCasFinder
AAGCCATAAAGACACCCAGCAAGA	TGGTATAATGCTGAAGCATAAATAATGCTATTTGGTGTT
AATCCATAAAGACACCCAGCAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039846.1\|WP_160256329.1\|533062_534598_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271184
NZ_CP039846.1\|WP_035362011.1\|543054_544557_-\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|181676
NZ_CP039846.1\|WP_003629145.1\|529653_529926_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_004448875.1\|534851_536243_-\|DNA-repair-protein-RadA	unknown	unknown	gnl\|CDD\|236994
NZ_CP039846.1\|WP_160256331.1\|539607_542025_+\|DUF3772-domain-containing-protein	unknown	unknown	gnl\|CDD\|225803
NZ_CP039846.1\|WP_160256325.1\|517294_519217_-\|acetate--CoA-ligase	unknown	unknown	gnl\|CDD\|234677
NZ_CP039846.1\|WP_160256326.1\|525116_525848_+\|DUF1275-domain-containing-protein	unknown	unknown	gnl\|CDD\|377734
NZ_CP039846.1\|WP_003628465.1\|520411_521125_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP039846.1\|WP_004448887.1\|525877_527248_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP039846.1\|WP_160256324.1\|516940_517270_+\|DUF1653-domain-containing-protein	unknown	unknown	gnl\|CDD\|377930
NZ_CP039846.1\|WP_003628460.1\|516331_516949_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160256332.1\|542085_542874_-\|NERD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377990
NZ_CP039846.1\|WP_160256333.1\|544629_545814_-\|mannose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|225493
NZ_CP039846.1\|WP_003629138.1\|537567_538353_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223838
NZ_CP039846.1\|WP_160256330.1\|536327_537359_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003629137.1\|538349_539138_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224052
NZ_CP039846.1\|WP_160256327.1\|530499_531177_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP039846.1\|WP_003628464.1\|519434_519869_-\|DUF4148-domain-containing-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160256328.1\|532323_532875_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003628469.1\|527317_528913_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039846.1\|WP_160256329.1\|533062_534598_-\|hypothetical-protein	gnl\|CDD\|271184	cd01184, INT_C_like_1, Uncharacterized site-specific tyrosine recombinase, C-terminal catalytic domain. Tyrosine recombinase (integrase) belongs to a DNA breaking-rejoining enzyme superfamily. The catalytic domain containing six conserved active site residues. The recombination reaction involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA. Many DNA breaking-rejoining enzymes also have N-terminal domains, which show little sequence or structure similarity.	4.63516e-25
NZ_CP039846.1\|WP_004448887.1\|525877_527248_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	2.86452e-124
NZ_CP039846.1\|WP_160256324.1\|516940_517270_+\|DUF1653-domain-containing-protein	gnl\|CDD\|377930	pfam07866, DUF1653, Protein of unknown function (DUF1653). This is a family of hypothetical bacterial proteins of unknown function.	1.34435e-23
NZ_CP039846.1\|WP_004448875.1\|534851_536243_-\|DNA-repair-protein-RadA	gnl\|CDD\|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0
NZ_CP039846.1\|WP_160256331.1\|539607_542025_+\|DUF3772-domain-containing-protein	gnl\|CDD\|225803	COG3264, COG3264, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	1.9385e-68
NZ_CP039846.1\|WP_160256325.1\|517294_519217_-\|acetate--CoA-ligase	gnl\|CDD\|234677	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional.	0
NZ_CP039846.1\|WP_160256326.1\|525116_525848_+\|DUF1275-domain-containing-protein	gnl\|CDD\|377734	pfam06912, DUF1275, Protein of unknown function (DUF1275). This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although most members have 6 TM regions, and may be putative permeases.	1.83117e-14
NZ_CP039846.1\|WP_003628465.1\|520411_521125_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	6.88984e-46
NZ_CP039846.1\|WP_003629138.1\|537567_538353_+\|ABC-transporter-permease	gnl\|CDD\|223838	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism].	2.59095e-75
NZ_CP039846.1\|WP_003629137.1\|538349_539138_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224052	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	6.59387e-119
NZ_CP039846.1\|WP_160256332.1\|542085_542874_-\|NERD-domain-containing-protein	gnl\|CDD\|377990	pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its predicted secondary structure is helix - sheet - sheet - sheet - sheet - weak sheet/long loop - helix - sheet - sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.	6.11291e-24
NZ_CP039846.1\|WP_160256327.1\|530499_531177_-\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	1.12388e-31
NZ_CP039846.1\|WP_160256333.1\|544629_545814_-\|mannose-6-phosphate-isomerase	gnl\|CDD\|225493	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism].	1.27263e-66
NZ_CP039846.1\|WP_035362011.1\|543054_544557_-\|replicative-DNA-helicase	gnl\|CDD\|181676	PRK09165, PRK09165, replicative DNA helicase; Provisional.	0

>NZ_CP039846.1|WP_160256327.1|530499_531177_-|recombinase-family-protein
MRDLPTFVTYLRVSTQRQGQSGLGLEAQKKAVQDYAASSGGKVLAEFVEVESGKRNDRPQLTQAMQRCRLTGAVLLIAKLDRLSRDAHFLIGLEKAGVEFVAADMPHANRLTVGIMALVAQQEREAISARTKAALAAAKARGVKLGGYRGGPALNPAEGTQAASEARRKAAQGFAEQVGPMVKELTGQGLSLRQVAAKLTEQGIRTARGGKVWTAAGVSRVMMRI
>NZ_CP039846.1|WP_003629145.1|529653_529926_-|hypothetical-protein
MKKTLYMCVAVLGLGFVQSASAATWDGGVSRHVEVKNPDQPDTTKGGVWDGGTDRKVKVEDPDTSDTTKGGVWDGGISEHVPVKYPSMPQ
>NZ_CP039846.1|WP_003628469.1|527317_528913_-|hypothetical-protein
MSNSFVRHARSHATSVCRGSRGFVKASCSLVALGLAAFAAPEEVRAEQTLVSIKGITLQGALDIGGSAFFLPNTNFGAGSYGTKSSGALVRHKNSTYGEFYGKPMLMGSWQTGWGFTVIGKASAIGATTLGDGDAEEVSQTSGTPRSIYLEEANLGVEVPLKMAGGHQILTVQGGRQAFAVDDGFLIGKGTYSAGDRGAWWYAPRYAFSGPGVIKLEGDSVRGDVFMLESNSDNDIDRGYDRPKTKFVGFDVSWFKNKPGGHGGSTYADRAAYVTLTYFHVRDADGSSHYDYSTRADRNGMNVAALSWGGTLFPVKALGISKNFTFYGNFVSEQNSHAGNGYKSVEAYGMFFEPGYTFSMLPWKPHLFYRYTRFGGGKNAEGSVKRNYDTFFLYDGKRYTYGGYWPGEIVGMYLAPLSDLEVHQFDLTGTPPVHLFRKKDELKLGVHFYDLSLLYPSGMGLKNVGRHVSNEVDFTAEYMLDETTSAAVAAGTAFSGPAGRALSRAGVPTGYRMHNIGRHAGVLEAYFYKHF
>NZ_CP039846.1|WP_004448887.1|525877_527248_-|amino-acid-permease
MPEPTTLPAGKPADGLRNRHIAMIALGGTIGAGLFVGSGAAIAATGPAVLLAFLLVGFLVILVMRMLGEMVVADPGRGSFVEYIRAAHGDKVGFTAGWLYWFFWVVVLGSEAIAGAILLQDWVHLPVWLLSVVLILVLKLINFAAPRVFGECEFWLSAIKVFSIIAFIAISLLYAAHVFGPGVSVKENLLGHGGLFPHGVVALLSIIPTILFTMMGSEIATVAAAESPEPGKNVARVTRSLGRRITLFYVAAVGMILIVVPWTNIVAGKSPFVAAMDVMGVPGAGLLMRIVVLSAILSCLNSAMYITSRILTELAAQGDAPGFLARSSAAVVPRKAIIVSSLAGTLVAFSSILAPGTIFAFLLSCSGGVILLIYSLIVTSYIVTRRAARQAGTEAENYTLPLFPLCNYVTLAGVVLVFVAMLLNPSERMTALATMGSSVVCYLMAVYFATNNKKAG
>NZ_CP039846.1|WP_160256326.1|525116_525848_+|DUF1275-domain-containing-protein
MRIKPLFSFFFFRGEIMTARTGHDAKLVIAILMVTMAMGMLDAISLLHLKIFAGYMTATIILMAVNIATSQAIVLSGLEAIACYFTGAIIGGRLVRRERHTRLVVGDILLGVGCLVGLAAFVWCAQLRGGIYITLGMLSLAMGLQTSATRHAKLPDMVLPAATMVLHGLAHNSTVAGGTNSGTWRRLAAIASLFVGAVIGTLVSDKNVGIGIAAAGATVFAAGGLLHWRRHPLALHLDKMSIP
>NZ_CP039846.1|WP_003628465.1|520411_521125_+|GntR-family-transcriptional-regulator
MLPASLFAKTEITGHGTASEAICDALRRAILEDQIQPGQPLPQSELASGFGVSIIPVREALKHLEAEGLVTFMPNKGAMVIGMNESDILEYSQIRAILEERAAAEGVRNMTRVDFARVEDAYEAFVEGVHGPSGRIRSGALNRAFHNSIYASARSPRLLEMIEDLHVRLDRYIRGHLVIEGRKDITDLEHKAILDACRNRDADLCAKLTRAHILEAAAISIDVFRSRKAAKTAATGT
>NZ_CP039846.1|WP_003628464.1|519434_519869_-|DUF4148-domain-containing-protein
MKLIAVRALSALALTTSLLAGAAVSAHAQENTDAPVTRAGDTSRLTDVDPSGFVGSIDPAENAGLLNYCVQNEYVDYDDGWRTLQEYNKKTNAVPEGQEGNMSYANGSAGLLHANNRTYTIAMAILPVRQKTCKAVLERAKASL
>NZ_CP039846.1|WP_160256325.1|517294_519217_-|acetate--CoA-ligase
MVDAFFPATDNPVSDRYQDLVQRAQRDPEEFWLAQAQRLAWHTQPMHASRSDFTGDVRISWYEDGRLNAAENCLDRHVLYQPDNAALIWQGQEDGHREVLSYRELHARVCRLGNVLRRLGVKKGDRVAIHLPMVAEGVISMLACARIGAVHVVLFGGFSAEGLAERLTDSGAVVVITADVARRGPKKIPSKTTMDEAIKLCGAQSAVRNVLVVPVTGADVPMQKGRDLSYTAEVALEIPDCPPEVMNACDPLFLLYTSGSTGRPKGLVHSTGGYLVWASFTQELVFDAKPSDVFWCTADTSWITGHTYVVYGPLVNGGTILVYEGLPSWPQPGRWWDVIDQNQVSVFYTSPTVIRAAMREDDSVVQSRSLSSLRVLGTVGEPISPEAWKWFYAEVGRNACPVVDTWWQTETGGVMITACAQNVAGKPGAAGLPLPGVAATLTDTKGQDIEGEGEGLLCLAQSWPGQAMTLWQDHERFRKTYFTTCPGHYFSGDGARRDATGYYWITGRVDDVVNVSGHRIGTAEIEDAVAEDHAVVESAAVGVPHDLKGQALVVFVVPKAEGAFDATAVNKAVAAGVGRYAVPEKIYVVPDLPKTRSGKIVRRLLRKIAANDLENMGDLSTLADPDIVAELIKLVAQQNG
>NZ_CP039846.1|WP_160256324.1|516940_517270_+|DUF1653-domain-containing-protein
MVQKCAPSATQDHNLPQQDTPIMIEHNQNNTDTQVPEMPCPGLYKHYKGGLYTVICTGRHSETEEWLVTYRSEARGDYWVRPLAMWQESVNGVLRFALLKAANAAETGA
>NZ_CP039846.1|WP_003628460.1|516331_516949_-|hypothetical-protein
MNHRVVLCQALTGFMFLFCVNPGHATTTGHAKTHAHTSKRTHHAAAAARSPAGGAPVVLTSQPGTSLDKEARRLNAEDMAAAARHKERPLVLIGSAPLSTSGGSMALFVQVQSASLCGSAGCSTDVYLKRGNDWDKILDSVSGPIELMSTSHGGMKDIVVDGTDRWVWKNNTYVDTIVAQDVPGLKDSIEQHQAQMRKHGKSSSR
>NZ_CP039846.1|WP_160256328.1|532323_532875_+|hypothetical-protein
MHTEASHNHHDTLKAPSTAPKPHRKKRADAGKPQGPKKPHAPSKTIALDNGTTKVSLQGRHGNGKHLLVSTQDLPDLLSFSDNGIRLHVVNNGTGRPYVSIHGHKAQAWKHSSNPKDLLTVARFLVGETHGGRRITFKDHNPFNCTRDNLEVLVPAIEQTFTIDWEKAEAARHAKAAQAQKAL
>NZ_CP039846.1|WP_160256329.1|533062_534598_-|hypothetical-protein
MLKRGNSYSVRFNVPEDRRADVGKVFGAKSGMKDEIVRTLGTRDYREAVKRRDAALEAIRKEVNAKLTDANLPPLHGDYVPNWWAAPEKAVEAGLHYKKQIDQASEAYEPCEGIVPGTIAEGAPTSEKEHIRAVVADLVLEASEKLPPAEGLRYYNTVMGIAEGQETPLEPLAERWLADARRLVSNGLLKRHRRVLTIFWKYLDSVGVARVVQKVDKRQARRFREWLIAKGKEANTVNSYLSSLRSFWTWLDDAGEVSDSNPWSGMSGGLKKLAKRDAKARGEKRPFTDDELLLLLKGQPSSRQRAQMIKDVFRLGLLTGARQNELCSLTRGRVVVPADPAELWGVEVTEDVSKTENSVRTIPLHPLAREIVERRLKDCTSPLADDLDAPLFPECPPGGEDNKRGWTFSKDFLRYRKAVLGAEGNGTDFHSTRRCFSTFMEVARANGVTACTDLVIDHLIGHKAERLAANTYAAKQLDWSLYSEAILGMVEKGMSEKVRAAMLDESQKEAR
>NZ_CP039846.1|WP_004448875.1|534851_536243_-|DNA-repair-protein-RadA
MAKKPSRTYVCTNCGAVHAKWAGQCDACGEWNTLEEMAVEPLAASSAAVRGGKGRRVALQALEGEIKLPPRTQTGIAELDRVLGGGLVPASVVLVGGDPGIGKSTLLLQAASKLAGKGERVLYISGEEAVDQIRLRAQRLGVAGAKLDLAASINVADIVATLEAEPDVRAVVIDSIQTMWLETIDSAPGTVSQVRACAFELIRAAKRRGFSLILVGHVTKEGALAGPRVLEHMVDAVMYFEGDRGHQFRILRAAKNRYGATDEIGVFAMTDRGLEEVSNPSALFLAERRGNIAGSAVFAGLEGTRPVLLEVQALLAPKGGDGAPRRAVVGWDTGRLSMLLAVLETRCGLKLSGMDVYLNVAGGLKVAEPAADLAVAAALVSAASGVPTSPGEVYFGEVGLSGEVRQVAQADARLKEAAKLGFDRAVLPRRIARGNTRSRPPEGLHLREIGHISDLVSAEMEAE
>NZ_CP039846.1|WP_160256330.1|536327_537359_-|hypothetical-protein
MDDVSRSVFVFGSPCNSNYGKVVFLPNGQLYGYQHENEHTWRMDGEELCLLNIQGQVSSRYHRTGNGWAGTVEDRRYPLYLNTLITTDTCETPGLPPVMVNTIPKAGTYYVEAALKAAGCPSHRLHLGGEDVVDDYRGLPDERVHIMPETLRLYCPLDLVTATLQGGHVVAHCDFQHVIDHVRSQGILVLSVVRNLRDIMKSMFRFLLYMIPPEPDDFLGQFWREQEGDARVTAFLAVEHERGLEHVRQMARMILADTSPQSIVLRYESLKQGDLQPHNIEKLQAINPEFTQRLSDAFVQTYGARTPTFSGEARQQPDPWCDVFEAYFHKSGMADLNAQLGYA
>NZ_CP039846.1|WP_003629138.1|537567_538353_+|ABC-transporter-permease
MDMVLDLVARLGRATLSLIRAAGALALFAASGLSHIVRPPFYGRVFLSTFLETGFFSLPVVALTALFSGGVIALQSYTGFAQYHAQSAIAGIVVLAVTRELGPVLAGLMVAGRVGAAMAAQIGTMRVTDQIDALTTLSTNPMKYLVAPRLLAGLIALPLLVLVADILGVAGGFTVAVVKLGFSAPAYITATLNSLKAIDVTVGLVKAALFGFLIALMGCYYGYNSKGGAEGVGSATTAAVVAASIMLLAFDYLLTDLFFSQ
>NZ_CP039846.1|WP_003629137.1|538349_539138_+|ATP-binding-cassette-domain-containing-protein
MSQTMTGTTPKIRIRDLHKSFGAKKVLDGVSMDVAQGTSFVVIGGSGSGKSVLLRCILGLITPDSGVIEIDGENVLEAPEKRREKLRSEIGMLFQNAALFDSLTVWENVTFGLLALHKITRKNARNHAGTILAQVGLDPSVGDLYPSELSGGMQKRVGLARAIAAQPDILFFDEPTTGLDPIMGAVIDGLIVDCVKKLGSTAIAITHDMASAQRIGDEAAMLYKGKLIWQGAASSLMNSGNPYVDQFTHGRREGPISMELRR
>NZ_CP039846.1|WP_160256331.1|539607_542025_+|DUF3772-domain-containing-protein
MRLKRFCSLFLACFVLTQGALLFATPSPLLAADTENTSVTTPAPTTLITNTSDIVSNSTLESIGSEISAIYQSSQQERTNGQSTTELAALLRRANAVATQTDTLQARLKPYQAVYQNFLDILGKPPGKDEPAEAASITEQRKLLLKKQQDINSRMTRLKLYQVEAQQLVNELRQHGTAIQQATLWQRFPSPLGVNFWSQFTSNFHTDTTRLSALGGEALGVLGVAFSGKRIFISLGGIALSALLLVGWFFSHGIIRRLVARVLPAGRIRPIIATLLCGVLSLLAWGFAFQIFWSVLAFDNSALDEDLTTLGSMMGAQFPLCGLVIELGFCLLSRHPEWRIFPMSDTIARNLRLFPLWLAAALIMRGFLRYIDTQSGISMLSVQLMDGLYVLAVSPLLFVIPQELRISDQTDNTPSQPSRTQFLISLAMGISIVCWLAVFTGYIPLAYTIISWLSMMAISMTGLLLLSLLVTVTASTLFPAGAPLGRHLVELGLPPRFVNQMCVVVPGIVNVLLLAVVYAVATSGGGFDPQQIWHQLYWLFHGQASTDGSHISLDAILLCAVLPVAGYYAISILKSWFQQRFFPITRLDIGAQASILSILSYAAWILVGLSMLAVLGVTVKSMTWVVSALSVGIGFGLQSIVQNFVSGIILMAERPVSIGDVVTIAGVTGTVERISVRSTDIRLDDQSTMIVPNSQFITSAVKNATRAQKPGVFTIELNLPFASDLDKAMDVMARTLATCKDVDESMRPTVSMSSVSDGSALLIGSAKAMSGTDVKVVRSAALFEIWKAFQENKIPVTVRQNLITV
>NZ_CP039846.1|WP_160256332.1|542085_542874_-|NERD-domain-containing-protein
MDKLGAIIAMAVCLLVLLNISTVFAFLFLLVKIALVVGLLALAGFLVFGFIEKPEKHLPPPLAPQDETPAEPVFEKPYFDAHEKGREGEEKVCAILQHMGWPALHNVLLEDDRGLTEIDHLVKAPWGIVVIETKNYDGFISGSSTPGVWKQSFPNSTGVGYRLFMDPVHQNYRHVCAVKYLTGMENVRSVVVFAGRAYTSPFVHHQVVRLKNLERVLRTRPEGFAYVDDRELERAWHVLQQASIANTGRGREHIDKLRQRFS
>NZ_CP039846.1|WP_035362011.1|543054_544557_-|replicative-DNA-helicase
MTTTDTPNQKDESLLALTLRQPPANVEAEQALLGALLTNNRAYDRVSDFLAGEHFANRVNGQIYEAIARRIENGQLADPVTMRAELEHSGILASVGGMAYMAKLLSSMVGIINAGDYGRTIHDAWIRRQLIDIGENVVNSAFGTTMGLSGQDQIEAGEEALFKLATEKGNEGDFVSFNKALSGAISVAAQAFQNEGHVTGLTSGLRDLDKKTGGLHPSDLLILAGRPAMGKTALATKMAFSAARAIMDEAEETGEKPKGAVAIFSLEMSAEQLATRILSEQAEVSGERIRRGDIGQKEFDRFVRVSHELARLPLVIDDTPAISLSAMRTRCRRLKRTQGLCLVVVDYLQLMRPSVGTRPESRVLEISMITQGLKAIAKELEVPVIALSQLSRQVESREDKRPMLSDLRESGSIEQDADAVMFVYRDEYYLQQRMPKETAFESMEKYSVAMDEWQRKMSLVHNKAELILEKQRHGPTGTINLFFEGEYTRFADLDTIHQEH
>NZ_CP039846.1|WP_160256333.1|544629_545814_-|mannose-6-phosphate-isomerase
MTLHDLPGAENLPLIAVRNRFARWLFEDALPFWASTGCDGTASNPAALGAQESLTLQGTPALPPFKRVRVQARQLFVFSWAALKGWQPAAERAESIFRFLLNAHRPDGRWVKLLARDGAVLDDSADLYDIAFVLFALAWYGRVDRTGQAVELARQTLVWLGQTMALPNGGFMNTRPANDAWRQQNPHMHLLEAVLALHETTGDAADLAQAHALYALFSQHFMDERTGTLGEYFGPDWQPAAGPEGQWCEPGHHFEWVWLLQAYARQSGVDTAAQAACLYHFAHQYGVDVQTALVRDAVARDGQILKPTFRLWVQGEALRGALCHDPQDKAGWATRMASNLLDRYFTGCPTGTWVDQLDAQGAPAASQIPSSSLYHIVTAYDALDQAARACVPSA

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Crispr_ID: NZ_CP039846_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039846_3

2288961-2289051

Orphan

Consensus_repeat	Method
TTGCACAAAAACCCCCGATTTCGACACTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039846_3

>merge|NZ_CP039846|3|2288961-2289051|CRISPRCasFinder
TTGCACAAAAACCCCCGATTTCGACACTTTTGGCTATAGAAATCGGACACTTGCCACAAAATTGACACATTTCCTCGATTTCGACACTTAT

>NZ_CP039846|3|3|2288961-2289051|CRISPRCasFinder
TTGCACAAAAACCCCCGATTTCGACACTTTT	GGCTATAGAAATCGGACACTTGCCACAAA
ATTGACACATTTCCTCGATTTCGACACTTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039846.1\|WP_003625318.1\|2275074_2276289_-\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|99747
NZ_CP039846.1\|WP_160257061.1\|2287195_2287342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160257063.1\|2296402_2296960_+\|CdiI-family-contact-dependent-growth-inhibition-immunity-protein	unknown	unknown	gnl\|CDD\|259838
NZ_CP039846.1\|WP_160257065.1\|2300436_2301399_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP039846.1\|WP_160257067.1\|2302659_2302899_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_035362397.1\|2276679_2278446_-\|fatty-acyl-AMP-ligase	unknown	unknown	gnl\|CDD\|236403
NZ_CP039846.1\|WP_003625325.1\|2278445_2279576_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160257057.1\|2270868_2272068_-\|LptF/LptG-family-permease	unknown	unknown	gnl\|CDD\|275200
NZ_CP039846.1\|WP_124297849.1\|2291317_2291980_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160257064.1\|2299616_2300447_+\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_CP039846.1\|WP_160257188.1\|2295161_2296400_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259837
NZ_CP039846.1\|WP_160257068.1\|2303268_2305194_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234714
NZ_CP039846.1\|WP_160257058.1\|2272064_2273027_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|224327
NZ_CP039846.1\|WP_160257066.1\|2302145_2302679_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_076027003.1\|2301816_2302035_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_160257059.1\|2273110_2274091_+\|acylglycerol-kinase-family-protein	unknown	unknown	gnl\|CDD\|366301
NZ_CP039846.1\|WP_160257062.1\|2287455_2288481_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003625320.1\|2276295_2276547_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|223314
NZ_CP039846.1\|WP_160257060.1\|2274115_2275069_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039846.1\|WP_003627225.1\|2303029_2303266_-\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|376855

Protein	Function_ID	Function_description	E-value
NZ_CP039846.1\|WP_003625318.1\|2275074_2276289_-\|pyridoxal-phosphate-dependent-aminotransferase-family-protein	gnl\|CDD\|99747	cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.	1.55143e-131
NZ_CP039846.1\|WP_160257063.1\|2296402_2296960_+\|CdiI-family-contact-dependent-growth-inhibition-immunity-protein	gnl\|CDD\|259838	cd13445, CDI_inhibitor_EC869_like, Inhibitor of the contact-dependent growth inhibition (CDI) system of Escherichia coli EC869, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring bacteria. This model represents the inhibitor of the CdiA effector protein from Escherichia coli EC869 (which is a DNAse). CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. The inhibitors are intracellular proteins that inactivate the toxin/effector protein. This domain is also known as DUF1436.	4.18397e-33
NZ_CP039846.1\|WP_160257065.1\|2300436_2301399_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.39475e-27
NZ_CP039846.1\|WP_035362397.1\|2276679_2278446_-\|fatty-acyl-AMP-ligase	gnl\|CDD\|236403	PRK09192, PRK09192, fatty acyl-AMP ligase.	0
NZ_CP039846.1\|WP_160257057.1\|2270868_2272068_-\|LptF/LptG-family-permease	gnl\|CDD\|275200	TIGR04407, LptF_YjgP, LPS export ABC transporter permease LptF. Members of this family are LptF, one of homologous, two tandem-encoded permease genes of an export ATP transporter for lipopolysaccharide (LPS) assembly in most Gram-negative bacteria. The other permease subunit is LptG (TIGR04408). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides, Transport and binding proteins, Other].	2.51893e-48
NZ_CP039846.1\|WP_160257064.1\|2299616_2300447_+\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	4.8186e-11
NZ_CP039846.1\|WP_160257188.1\|2295161_2296400_+\|hypothetical-protein	gnl\|CDD\|259837	cd13444, CDI_toxin_EC869_like, Zn-dependent DNAse of the contact-dependent growth inhibition (CDI) system of Escherichia coli EC869, and related proteins. CDI toxins are expressed by gram-negative bacteria as part of a mechanism to inhibit the growth of neighboring bacteria. This model represents the C-terminal toxin domain of CdiA effector proteins. CdiA secretion is dependent on the outer membrane protein CdiB. Upon binding to a receptor on the surface of target bacteria, the CDI toxin is delivered. A wide variety of C-terminal toxin domains appear to exist; this particular example from Escherichia coli EC869 and other bacteria appears to function as a Zn2+-dependent DNAse degrading the genome of target cells.	1.68321e-33
NZ_CP039846.1\|WP_160257068.1\|2303268_2305194_-\|hypothetical-protein	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	6.5509e-35
NZ_CP039846.1\|WP_160257058.1\|2272064_2273027_-\|metallophosphoesterase	gnl\|CDD\|224327	COG1409, Icc, Predicted phosphohydrolases [General function prediction only].	1.69911e-26
NZ_CP039846.1\|WP_160257059.1\|2273110_2274091_+\|acylglycerol-kinase-family-protein	gnl\|CDD\|366301	pfam00781, DAGK_cat, Diacylglycerol kinase catalytic domain. Diacylglycerol (DAG) is a second messenger that acts as a protein kinase C activator. The catalytic domain is assumed from the finding of bacterial homologs. YegS is the Escherichia coli protein in this family whose crystal structure reveals an active site in the inter-domain cleft formed by four conserved sequence motifs, revealing a novel metal-binding site. The residues of this site are conserved across the family.	2.04486e-09
NZ_CP039846.1\|WP_003625320.1\|2276295_2276547_-\|acyl-carrier-protein	gnl\|CDD\|223314	COG0236, AcpP, Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	1.30516e-06
NZ_CP039846.1\|WP_003627225.1\|2303029_2303266_-\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|376855	pfam02609, Exonuc_VII_S, Exonuclease VII small subunit. This family consist of exonuclease VII, small subunit EC:3.1.11.6 This enzyme catalyzes exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.	3.39466e-05

>NZ_CP039846.1|WP_160257062.1|2287455_2288481_-|hypothetical-protein
MRIQNPPRGHQTATFAAFIDALSNALSPELQNLILASGSRNPSLQTDRMPKPVSGDMTQALAVFFHEEQIWNLQRQIREAYERSGSTTPRYEFCNYVQDRTLITGTPRGILGRALHIAARQYIYHPELPLSLQRCLHALNETHGAEDLLVPPCEFREGSTQKNTGKKSRKHTLSLATFKTLKASYASVLPLLAAMDVIWCGRYLPSHPLSAWTGSHEQSGRDYRPGHSFMDTPEDLDIARRTLSYTRWFRNWGLQHGSRKAQNRLLDPATTPEIESDVPEAYAVTAMPTTMDQTQESAASRSCASGAFALPLAPLPDPLLKALQSYRDSNTKKPETGTGEG
>NZ_CP039846.1|WP_160257061.1|2287195_2287342_-|hypothetical-protein
MSDTARTKNGTALQELVTRLARQAARAHVLSSLPSNALQNATASERKV
>NZ_CP039846.1|WP_003625325.1|2278445_2279576_-|hypothetical-protein
MRILFPYIAQPHQTLHSLPIAMEIASRHPEAEVHLACTTQSHLDYVRSLAAYYPESKVQFSLLHLPQFLRRQTERYGQTAFFRLASLFFNKNYFSSFQGIVVPERTSLYLRKLGVNKPRLIWTRHGAGDRAIGFARDVKKFDYVLMAGHKIEERLLAQGAIRPGCYHTGVYAKFDMVHRMRHRTLRLFNNNRPTILYNPHFNTRLSSWPKMGLNVLAHFANQDRYNLIFAPHYRLFDNKKAEALQLERAFGHYPHMLVDTGSARSIDMTYTSTADMYLGDVSSQVAEFLVKPRACMFLNAHNVDWEGDENYRFWSLGPVLNTIDSLGEDIEQAFSSHNAFVNLQKDYIRDTFDLVGDEPTAPVGADAIVDFLRMAS
>NZ_CP039846.1|WP_035362397.1|2276679_2278446_-|fatty-acyl-AMP-ligase
MNSMNPASAISLDETLQPVSTASGQPRRYGDFATFPEALDYAAQGEAGFNIYSGKGVLLEALPYKVLRQQAVETALRLLGMGLQPGDRVAIVAESDGDFARIFFGCQYAGLVAAPLPLPVAFGGKEAYLKTLRGMITSAQASAVIIPQIIEGWTDEIVTGLGLVFAGPPAELMARPVPDMPLPDIQPENLSYLQFSSGSTRFPMGVCVSHRSGMANVSSIARNGLQVKETGDRCVSWLPLYHDMGLVGFFLTPMTCQLSVDLLPTREFARRPHVWLDLISRNRGTIAYSPSFGYELCARRPASEGLDLSCWRVAGIGGDMIRAHILDEFAERFAPAGFSPKAFVASYGMAEATLAISFAPLDTGIETDTVDLPALESTGIARPPASADTPSRTFVICGKVLPGHELEVRNSYGRVLSDREVGTIYVRGPSLMSGYFRMPEESSKTLDADNWLNTGDLGYMLNGQIVVTGRAKDLIIINGRNIWPQDLEWSAETHIPVLRSRDVAVFSLEKGDHEEIVALIQCRASATDTREKLKAEATSLFRRLHGVEVSVVLVPPHALPQTSSGKLTRAKARTMYLSGAFEQQSEVA
>NZ_CP039846.1|WP_003625320.1|2276295_2276547_-|acyl-carrier-protein
MSETVESVSALIIQKLLANPKVPRDIDGNCKIMEDLAFDSLAVMNFVMEVEDSLDVSIPLDKLADIRTINDLAACIVALKNKG
>NZ_CP039846.1|WP_003625318.1|2275074_2276289_-|pyridoxal-phosphate-dependent-aminotransferase-family-protein
MTSLFSKFEGTAGALGSVIAVGGRNPFAVVIEKPVSSTVGIIEGRETLLFGTNNYLGLSQSKNAIRAAQEAAAACGVGTTGSRIANGTQSLHRQLEKDIAAFFGRRDAMVFSTGYQANLGIISTLAGKGDHLFLDADSHASIYDGSRLSAAEVIRFRHNDPDNLYKRLKRMDGTPGAKLIVVEGIYSMTGNVAPIAEFVAVKKETGAYLLVDEAHSFGVLGENGRGAAEADGVEADVDFIVGTFSKSLGTVGGYCVSDHPELEFVRLNCRPYMFTASLPPEVIAATTAALGDMQAHPELRKQLMANAQQLHAGFVDIGLNASKQATPVIAVTLETAEEAIPMWNRLLELGVYVNLSLPPATPDSRPLLRCSVMATHTPEQIAQAIAIFRQAAAEVGVSPAATAA
>NZ_CP039846.1|WP_160257060.1|2274115_2275069_+|hypothetical-protein
MKGIRQGQKEIFTLTEQELHTPVSPLVTEFVHNLLGDAQPLGVLFYGSGLRGGIQDDTLLDFYIIVDKQADWPRTRLSCLANALLPPNVEYHECRVGEHLLRAKVAILSLTQFRALTRPHTLDTTVWARFSQPVRLVWWRDSKAQEALHACVMRAVLTAAWWAAQLGPDSGSVLDYWNALYRNTYRVELRVEKAGRGQSIVDAYIQRYAQLLLPCWQMLGIPYASQDQIVTPQIPQEQKQHAIQKWALRASCGRPLNILRLLKAAYTFTGGARYAAWKVQRHSGIEVPLSPFAEKHPLLAAPPIVWRLWQQGAFKRK
>NZ_CP039846.1|WP_160257059.1|2273110_2274091_+|acylglycerol-kinase-family-protein
MSDRFALIYNPRSRRNLKADPKYLELTGKMLGPLFCSPRTHAALRQQVYALLQQKISCLVVDGGDGTVGHVLSALYTSSCPPEQWPSIVVLPSGNTNLIATDVGFGKRGVEALQILQARLASGRLLSDVRRRQPLVVTRDGQKDGASLGFFGGLGAFGRGIEIAHDPKILKNYSHDAAVMATLFVTAWQLLSPKHRRGWLEGTKVTVERDGEVLPEQDHFLFLCTALHRLPHGIWPFWQNLKEADRGISYLDVAAFPPHLGRAVWNLLRGKAPQWLRQNAAYRSGSATELVLRTDQSFILDGEVLPPGQDGSLTVSAGPVVSFVHV
>NZ_CP039846.1|WP_160257058.1|2272064_2273027_-|metallophosphoesterase
MSHAVGPYPVIGDVFFLSCVHIAHLSDPHLPLVGLPSLKEIRFKRILSLLSWQLGRRHLHKLPALQAIMQDIRHFHPDMVALTGDLTNLGLLKEFQNARQWLLQQDLPPALLIPGNHDALIKENSAVKQALWAEWLHNRTQSEPAAPSLLVKEHVALIGINTAIPTLPFLASGKAGQAQLVLLADLLRRTRAMGLCRIVLLHHPPAQGIVSRRKGLDDFQAFQDVLRAEGAELVLYGHSHRAQITPIPGTDILAVSSTSASHIADEPEKSAGWNTISVHKRPDIWHITIQHRSLMPDGSLQDSQMRRVCRAHRFLPATSL
>NZ_CP039846.1|WP_160257057.1|2270868_2272068_-|LptF/LptG-family-permease
MTARMLNVPFLRRIVASLRPGTLDRYLIAQVMPPFLVALSVVMIALILERLLVLFNLLAAGNNHIGIFIGLLAALLPHYLGLAIPAALCVAVFTVIRRMSQNEEIDAINSSGLSLLRITRPYIQLGIILGVLSFLLYGFIQPHARYDFRSTFYIASHTGWAPRLQPRMFASPSSQLTIVADKVSQSGSDLENVFIRDLSEQQERDITARNGHIRIGSDGETVEIDLTNGVIVTDKGDGVPSLVTFDHSTRYLTHASHISPFRTRGEDERELTSPELVGRLIRHDPSISRPHMRSEVHFRMARSLTVPFIPLLAASLALMRKRQRNNAGLPLAFIIMVGFDHIIQFGHSMVATKKASLLLIWGPALVFIVGCTLLLLYKSGSFQVLKAWRSRSSAQKALP
>NZ_CP039846.1|WP_124297849.1|2291317_2291980_+|hypothetical-protein
MNNMTQASQKLPIWKQGTIRLIDIAPGVSGRFRLRQGLPVSLAWYDILFREGHIRVEINGQVCHGHLEEVPGETGGCSHVIDDRLFNALFPHGQTLPLCLAGYNMAFLHTLLGAPWDEPPYLLCLYKMSRMFDLGKTGDYTLAEIAEYTDPEVHVPWYENEALTRVELGRVVLRKLLSMCRLNMMVALSGAKVPPPPTSEPFGKIRGWQQMEGGVFRDFE
>NZ_CP039846.1|WP_160257188.1|2295161_2296400_+|hypothetical-protein
MRDGKSMQDLHQIEAHNQESTTELQSAYAFVNGQAIDNATLAGFQNAMGNGESRDDVFKQIVNSASAQSVIEDVYADWGQLPPDSSALQTARTALYNLSYAWTTTVQNQTAAQLATEAAAYTPSTSVSFQDIVNNLAASPNQAIGLEANLLTNPYLESGATIDETRTLMIVGGVNSFAASIDEESVIVEIKDLQQDNSKVCDPVQFRSAKSIVTNISNANDIKPANQTFDIVNGKNWSQSYKDNGIQWKSAGGRNDDQGLPYEAWVQNQLNPSHDPNGVVWLQDEKSNWRTFDHWDEKDGNAISDKTIDLQLPWYQKNPTAVAARVMASAYKMAGYDTDQSKIGSNSFVSFRQNQIQMYTLKIGVPYITDPAEMTPELQNEWKALCRAYHRANDIIPKQTGKPISIQIDTVS
>NZ_CP039846.1|WP_160257063.1|2296402_2296960_+|CdiI-family-contact-dependent-growth-inhibition-immunity-protein
MTVIRDKSCSIRRTDKWISIESEEVWYGIYFSRRGHVIHAPRDVTPEWIGQNVRLALQTSESFTPIDGGSVNGDALIAMKAASNERRLAFWDEITASYGYKSRDVAWKKFDLVFGSWCFDLTNDITLKSSKSSRGGGHSAWPTNRNEGRVFSVPIDAPDKDIGEAVLKAFAKCEGPGKSTEPLFP
>NZ_CP039846.1|WP_160257064.1|2299616_2300447_+|sulfotransferase
MSDLSYSVHVISGLPRSGSTLLAALLRQNPQIIAASHNTPVMPMLIRIMSLMSEGEYRTEFKNGQWQRLMRGILQSYLNPDAQKHVMLDINREWCAHAGLLGHLYPKAKIICCVRDPVWILNSFEHLIIRDPLLGSRLVPITHRGTQHDRIDYLASREGAFGYAWRLLTEVFFGPFADKVIIIDYDKLVREPVFVMERLTQLLNIQPFAYNFEHIETPDVDAFDAALGTPGLHYLRQSVAASRKRLILPPHIVERMAHQMFWRKPDLNSGGAVVIA
>NZ_CP039846.1|WP_160257065.1|2300436_2301399_-|helix-turn-helix-transcriptional-regulator
MAEKSTQTVASSDVPESRQTDTTQSSMIRLNAYTRLIALQTGLHILYWDARTKHNFSYSAYHDDDLIYFGAYTGGNSHMETRCWDGLTTYDTLSKPDDAYVAYRPGCRIDFTKTAGAGAGVTITLSPTTLASLSAEDATCLDQKLRSGHYFNQVRGGRQLLSFANALRSVGTSPKRPGCQLQMLGQSLSFMGSLIEQVCHIAPPNVSLSEREIRRLNDTRDMLLADLASPPRLDQLARHAGMSVSRLQRHFRMLFGSTIYALFQKERMHEAYRQLVKDDESILTIATRMGYANPGHFSAAFRKQFGINPSELRRIPRLRR
>NZ_CP039846.1|WP_076027003.1|2301816_2302035_+|hypothetical-protein
MSKSVYVEARPRGRDGEPISYYVVEDQASSVLHSTNTQAAGIQWAKACGYVPHVARVRHLDDKRKPDHWRKV
>NZ_CP039846.1|WP_160257066.1|2302145_2302679_+|hypothetical-protein
MASRTKGICRFLGAEGQHLVFLGDSGTREWARVQRLAAQRWPGLPHPGLVARDGKTMDSLPERIVYDMLQKLLRRHMKLDVHQPILQQAGDYRADMTLRKGQASLFIEVVGCCGSDRITRNQKEQEWLQRFDKRMAFYRAHAIAPVCIWLDQFAQPGTLRKLCINLVDTIALEGARS
>NZ_CP039846.1|WP_160257067.1|2302659_2302899_+|hypothetical-protein
MKEPDHEQHDTGFPEASDLETGHHPAHEDLLQIRDALLPARQGMRDGKNHHVDGIILLTERLVKDLDAACDALDAASRS
>NZ_CP039846.1|WP_003627225.1|2303029_2303266_-|exodeoxyribonuclease-VII-small-subunit
MNQMQQSPISTGNEPPTKFADAYAELQRIAAALKPEQGKIPDVDAIEPLVKRANILAKYCQDRIDAVRKLVDEQQEHG
>NZ_CP039846.1|WP_160257068.1|2303268_2305194_-|hypothetical-protein
MTVIHENVRNDGVSLKTYLNDLQALLRTQPDAWVRCELHGLTPSAKFVRMEFIEHDAQGRQIAKAQGGCFPAVYEKIQQSFAKSGLSVTTGIKVLVRLRADLQAAYGFQVQVVDIDPSYTLGDLKTRMDAIRQRLVQEKLWDKNRSVSRPTDFERVAVISPPGAAGQGDFRASADILARVNLVTFDYYETSFQTANAPDGIISVLRKIFPLAKAGKYCAVALIRGGGASSDLAWLVDYNLTRALCHMPVPIMTGIGHQRDRTLLDEVACIPCDTPSKVAEYIRTTVCNAGLIADRSYRDIIFNTSSIAEKHATNISELQTQALIDVRETARVVDEKLRKISDYHARAVRMLTEMSGQEVAKISRQIALNAEATQNKASKDILAAVARITSDAGTQIHHADRGLRQCIELALTAPLRIIGEATTSLDRMTRYIQGATYDQMRLTGEAILSLKGNITRLPAGTLSQAESLLAQIGETVRGTAMHALVTVERDMQTQLSSIYSAPAAEISQIAVALENTTSSITDSVRTSAKMAEWHLHVNRNNTQEHLTTAITCVPPLVREIKYKILENALQYIEQLKGRITAAQTIAAALDPRTVVAAGYAILRNEDGCPMTHVQDVANAKIVSADLRDGSITLQPLQAKKI

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

687977 : 708210

Aeromonas_phage(33.33%)

terminase,plate,tail

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003625401.1\|687977_689240_-	sodium:proton antiporter	A0A2H4J178	uncultured_Caudovirales_phage	2.5e-30	38.3
WP_003625399.1\|689312_689759_-	hypothetical protein	NA	NA	NA	NA
WP_160256383.1\|689881_690451_-	hypothetical protein	NA	NA	NA	NA
WP_160256384.1\|690457_691555_-\|tail	phage tail protein	A0A077KC23	Edwardsiella_phage	5.9e-12	34.5
WP_012812544.1\|691562_692141_-	DUF2612 domain-containing protein	Q6UIZ7	Burkholderia_virus	1.3e-29	38.6
WP_160256385.1\|692140_693376_-	hypothetical protein	A0A2R3UAL9	Myoviridae_environmental_samples	1.0e-60	38.5
WP_160256386.1\|693362_693716_-	hypothetical protein	A0A068CCM1	Acinetobacter_phage	1.1e-12	42.1
WP_160256387.1\|693727_694417_-\|plate	baseplate assembly protein	A0A2R3UAK1	Myoviridae_environmental_samples	3.1e-35	43.1
WP_160256388.1\|694413_695340_-	hypothetical protein	NA	NA	NA	NA
WP_160256389.1\|695336_695657_-	hypothetical protein	A0A191ZDK0	Acinetobacter_phage	8.3e-07	36.2
WP_160256390.1\|695653_696367_-	hypothetical protein	NA	NA	NA	NA
WP_160257149.1\|696402_697221_-	hypothetical protein	NA	NA	NA	NA
WP_160256391.1\|697585_698041_-	hypothetical protein	NA	NA	NA	NA
WP_160256392.1\|698079_698517_-	hypothetical protein	NA	NA	NA	NA
WP_160256393.1\|698519_699674_-	DUF3383 domain-containing protein	H9C0W5	Aeromonas_phage	1.1e-27	33.6
WP_160256394.1\|699692_700265_-	hypothetical protein	NA	NA	NA	NA
WP_160256395.1\|700225_700606_-	hypothetical protein	NA	NA	NA	NA
WP_160256396.1\|700596_701103_-	DUF4054 domain-containing protein	H9C0W0	Aeromonas_phage	3.6e-12	43.9
WP_003628962.1\|701139_701457_-	hypothetical protein	H9C0V9	Aeromonas_phage	2.5e-11	40.4
WP_003628961.1\|701506_702544_-	DUF2184 domain-containing protein	A0A219YBB0	Aeromonas_phage	4.1e-79	46.7
WP_160256397.1\|702543_703044_-	hypothetical protein	A0A219YBF2	Aeromonas_phage	1.1e-29	47.5
WP_160256398.1\|703081_704083_-	DUF2213 domain-containing protein	A0A2R3UAL3	Myoviridae_environmental_samples	1.7e-29	37.0
WP_160256399.1\|704079_705459_-	DUF1073 domain-containing protein	A0A2R3UAL5	Myoviridae_environmental_samples	1.2e-86	44.2
WP_160256400.1\|705494_705692_-	hypothetical protein	NA	NA	NA	NA
WP_160256401.1\|705706_706759_+	rhodanese-related sulfurtransferase	NA	NA	NA	NA
WP_160256402.1\|706755_708210_-\|terminase	phage terminase large subunit	A0A1X9SGU8	Bradyrhizobium_phage	1.3e-104	45.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP039845

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP039845_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_1

68469-68924

Orphan

Consensus_repeat	Method
AGTCTTCCCCGCGTCTGCGGGGTTTAACCGG	PILER-CR
GTCTTCCCCGCGTCTGCGGGGTTTAACCG	CRISPRCasFinder
GTCTTCCCCGCGNNTGCGGGGTTTAACCG	CRT

7 spacers

The CRISPR arrays of NZ_CP039845_1

>merge|NZ_CP039845|1|68469-68924|PILER-CR,CRISPRCasFinder,CRT
AGTCTTCCCCGCGTCTGCGGGGTATAACCGTGCTGAGTGTGGCGGCTGGGGTGGGATTCGAAGTCTTCCCCGCGTCTGCGGGGTTTAACCGGGAATGCACCCGGAGGACATTAAGGCCGCACTGTCTTCCCCGCGTCTGCGGGGTTTAACCGGCGTGGCACGACAAACGGGACGGAGGGCATCGGTCTTCCCCGCGTGTGCGGGGTTTAACCGCTATCACCGAAATGCTCGCCAATCCTGCTGTCGTATTCCCAGCGTCTGCGGGGGTTAACCGTCAAAATCCCGTCTGTATCGGATGGGGCGCGCGTCTTCCCCGCGCCTGCGGGGTTTAACCGCGGCAAGGCTTATGTGGAGGCTGGGGGATTCGTCTTCCCCGCGCGGGTGGGGGTTAACCGGCTGTTGCTGGAGGCGCCACAATCAACGACTGGTCTTCCCCGCGATTACGGGGTTTAACCG

>NZ_CP039845|1|1|68469-68621|PILER-CR
AGTCTTCCCCGCGTCTGCGGGGTATAACCGT	GCTGAGTGTGGCGGCTGGGGTGGGATTCGA
AGTCTTCCCCGCGTCTGCGGGGTTTAACCGG	GAATGCACCCGGAGGACATTAAGGCCGCAC
TGTCTTCCCCGCGTCTGCGGGGTTTAACCGG

>NZ_CP039845|1|1|68470-68924|CRISPRCasFinder
GTCTTCCCCGCGTCTGCGGGGTATAACCG	TGCTGAGTGTGGCGGCTGGGGTGGGATTCGAA
GTCTTCCCCGCGTCTGCGGGGTTTAACCG	GGAATGCACCCGGAGGACATTAAGGCCGCACT
GTCTTCCCCGCGTCTGCGGGGTTTAACCG	GCGTGGCACGACAAACGGGACGGAGGGCATCG
GTCTTCCCCGCGTGTGCGGGGTTTAACCG	CTATCACCGAAATGCTCGCCAATCCTGCTGTC
GTATTCCCAGCGTCTGCGGGGGTTAACCG	TCAAAATCCCGTCTGTATCGGATGGGGCGCGC
GTCTTCCCCGCGCCTGCGGGGTTTAACCG	CGGCAAGGCTTATGTGGAGGCTGGGGGATTC
GTCTTCCCCGCGCGGGTGGGGGTTAACCG	GCTGTTGCTGGAGGCGCCACAATCAACGACTG
GTCTTCCCCGCGATTACGGGGTTTAACCG

>NZ_CP039845|1|1|68470-68924|CRT
GTCTTCCCCGCGTCTGCGGGGTATAACCG	TGCTGAGTGTGGCGGCTGGGGTGGGATTCGAA
GTCTTCCCCGCGTCTGCGGGGTTTAACCG	GGAATGCACCCGGAGGACATTAAGGCCGCACT
GTCTTCCCCGCGTCTGCGGGGTTTAACCG	GCGTGGCACGACAAACGGGACGGAGGGCATCG
GTCTTCCCCGCGTGTGCGGGGTTTAACCG	CTATCACCGAAATGCTCGCCAATCCTGCTGTC
GTATTCCCAGCGTCTGCGGGGGTTAACCG	TCAAAATCCCGTCTGTATCGGATGGGGCGCGC
GTCTTCCCCGCGCCTGCGGGGTTTAACCG	CGGCAAGGCTTATGTGGAGGCTGGGGGATTC
GTCTTCCCCGCGCGGGTGGGGGTTAACCG	GCTGTTGCTGGAGGCGCCACAATCAACGACTG
GTCTTCCCCGCGATTACGGGGTTTAACCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_160255891.1\|61826_62246_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255887.1\|58633_59674_+\|exocyst-complex-component-EXO70	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255902.1\|79614_80106_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255901.1\|78034_79012_+\|3',5'-cyclic-nucleotide-phosphodiesterase	unknown	unknown	gnl\|CDD\|238032
NZ_CP039845.1\|WP_160255900.1\|77255_77765_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255898.1\|74398_74974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215633
NZ_CP039845.1\|WP_160255888.1\|59808_60798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370103
NZ_CP039845.1\|WP_160255896.1\|73281_73770_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255894.1\|64239_67521_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273632
NZ_CP039845.1\|WP_099541154.1\|63370_63694_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255899.1\|75109_75415_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255890.1\|61397_61790_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255889.1\|60932_61331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_099541150.1\|72189_73125_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366618
NZ_CP039845.1\|WP_160255897.1\|73890_74343_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255886.1\|58144_58585_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255895.1\|71382_72006_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215633
NZ_CP039845.1\|WP_160256142.1\|75999_77088_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	unknown	unknown	gnl\|CDD\|238846
NZ_CP039845.1\|WP_160255893.1\|63700_64099_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255892.1\|62691_63144_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_099541150.1\|72189_73125_+\|hypothetical-protein	gnl\|CDD\|366618	pfam01401, Peptidase_M2, Angiotensin-converting enzyme. Members of this family are dipeptidyl carboxydipeptidases (cleave carboxyl dipeptides) and most notably convert angiotensin I to angiotensin II. Many members of this family contain a tandem duplication of the 600 amino acid peptidase domain, both of these are catalytically active. Most members are secreted membrane bound ectoenzymes.	6.87753e-05
NZ_CP039845.1\|WP_160255901.1\|78034_79012_+\|3',5'-cyclic-nucleotide-phosphodiesterase	gnl\|CDD\|238032	cd00077, HDc, Metal dependent phosphohydrolases with conserved 'HD' motif.	0.00932857
NZ_CP039845.1\|WP_160255895.1\|71382_72006_+\|hypothetical-protein	gnl\|CDD\|215633	PLN03210, PLN03210, Resistant to P. syringae 6; Provisional.	0.00754916
NZ_CP039845.1\|WP_160255898.1\|74398_74974_-\|hypothetical-protein	gnl\|CDD\|215633	PLN03210, PLN03210, Resistant to P. syringae 6; Provisional.	2.74908e-05
NZ_CP039845.1\|WP_160255894.1\|64239_67521_+\|AAA-family-ATPase	gnl\|CDD\|273632	TIGR01448, recD_rel, helicase, putative, RecD/TraA family. This model describes a family similar to RecD, the exodeoxyribonuclease V alpha chain of TIGR01447. Members of this family, however, are not found in a context of RecB and RecC and are longer by about 200 amino acids at the amino end. Chlamydia muridarum has both a member of this family and a RecD. [Unknown function, Enzymes of unknown specificity].	1.41353e-73
NZ_CP039845.1\|WP_160256142.1\|75999_77088_+\|phosphoadenosine-phosphosulfate-reductase-family-protein	gnl\|CDD\|238846	cd01713, PAPS_reductase, This domain is found in phosphoadenosine phosphosulphate (PAPS) reductase enzymes or PAPS sulphotransferase. PAPS reductase is part of the adenine nucleotide alpha hydrolases superfamily also including N type ATP PPases and ATP sulphurylases. A highly modified version of the P loop, the fingerprint peptide of mononucleotide-binding proteins, is present in the active site of the protein, which appears to be a positively charged cleft containing a number of conserved arginine and lysine residues. Although PAPS reductase has no ATPase activity, it shows a striking similarity to the structure of the ATP pyrophosphatase (ATP PPase) domain of GMP synthetase, indicating that both enzyme families have evolved from a common ancestral nucleotide-binding fold. The enzyme uses thioredoxin as an electron donor for the reduction of PAPS to phospho-adenosine-phosphate (PAP) . It is also found in NodP nodulation protein P from Rhizobium meliloti which has ATP sulphurylase activity (sulphate adenylate transferase) .	1.36116e-13
NZ_CP039845.1\|WP_160255888.1\|59808_60798_-\|hypothetical-protein	gnl\|CDD\|370103	pfam08761, dUTPase_2, dUTPase. 2-Deoxyuridine 5-triphosphate nucleotidohydrolase (dUTPase) catalyzes the hydrolysis of dUTP to dUMP and pyrophosphate (EC:3.6.1.23). Members of this family have a novel all-alpha fold and are unrelated to the all-beta fold found in dUTPases of the majority of organisms. This family contains both dUTPase homologs of dUTPase including dCTPase of phage T4.	7.60157e-11

>NZ_CP039845.1|WP_160255894.1|64239_67521_+|AAA-family-ATPase
MRVVVKKILFPKLDGPPSDDLENYMFLGTFEDENGSLTTAKFFVRSVSHVSPGGCYEVEGDWKRTAKGEEFNSWCLIPSVPDTFALSCVYLNGLFPPEMCGTSALSRRLSALTREYGPDVLVRALATPTILTRLSDQPEIFAANILRLWEAATRESHMALMMHRAGFTTGDLDMVWRGCAFKVAERIGGDPYQLVAIPGIDVAKADMLFRTLGGNPYDPRRIAGIIRRSLMASEGLSATNDDGEKIGFTAHVEFPGSTAVDVTDILTSGKAEPLRDDLISGIDPKIGMRLDVLRDFLSKPQEALKFGLRIRKTRDGRTLVARERVYQAEVRVARNIARLLQAPPLKDKATVQATCRNLFNQPDFQRFDAVQRTAVEMACYERFCVITGGPGTGKSTILDAVIAARVAMGTEKRSFLLGAPTATAALRMTETTGLDAATIQSLLKCKGEKAGGEQWFDFNRNNPLPSGCTVYVDEGSMVDIFLSDHLLDAIPTDASLLILGDDGQLMSVGPGAFLENLLNTRTMAGDRVVPAICLQNTYRSNPKSNLAIQAKEIRYGGVPTINGDSSGGTSMQSVVPEKISNFIVYAMSNVMPALGIQNPLKDVAVLGPQNPGVGGLWEINSQMSRYFNPNGAKIPGLSAPRFAKEMPVPRVGDRVMRRKNVKGDKLCVNGSRGFIEAYIPPSPADPDAKKGKIKIRFDNNEVRTEDVSWDWHKKFELAYALTIHKSQGQQYQYVLMVITPEHANMLDNSLVYTGWTRAKEGVAVVGSFDAFAGAVQRSRMNTRLTMLPDLLSEILVPGIADEFRSRWYKKPPMDDLPRPGGREKWFQTKYGNASGHKIRTIEGIKVEAPANGVQAGLHGGFPSPPSQPHSSGSGPTTPTASGSHQAPPVRYAVNQPTSSPPRPMFTGGIGYRPNIPVSSALPNPPATPSYDKKGVINHVQENAPPRQPNTSHQDATSPTYPKSNSAVQPSRAVPLQAVGLQSPRRFGWSPTIRQPAAAPATSNAQPTARSAAPDHVPATSRPAQPHRPVRPTTHVESPSARPVPASRPSLGFIGWRPNIHPIKQTCHEPQPEMDSEMGMEDQHSSSYEDAPSP
>NZ_CP039845.1|WP_160255893.1|63700_64099_-|hypothetical-protein
MSKAKIIQRLFEARYGSEAFMERNADFFERYGICANRINDLERQGYDCFRSRTHSMSMCETSRHFSICFGDAVLDTWLTAAEWLTLWRRGFVGKAMPIMPMKSKDCAGCPPRVWVIPERVIYQSTKNIRRLP
>NZ_CP039845.1|WP_099541154.1|63370_63694_+|hypothetical-protein
MCTNDYSNTEFSKEEVEKCVQAMSRTACIEALELIASGFVIIELTSDRRDVYIDRLHGVEVRDPDNPCRKMLMSGAWPLFRAGMINQFGTVTPAGMKLLKERKCMRS
>NZ_CP039845.1|WP_160255892.1|62691_63144_-|hypothetical-protein
MAMAFKCIFDTGLSDVEDISLLEEARELIEDWTDNPDIMPSVMPPIIGDMDNKNSITRRLLSCKAIAETEWGRGGKAYLLTFIVLADTNSGGSTQNDLRWRIVARNDALPKIAKRIEQLKAREEVRLTIQGVSETARKSAEIAARTIGFS
>NZ_CP039845.1|WP_160255891.1|61826_62246_+|hypothetical-protein
MPALDIAQIISQAKLGSTRKDAQIDACEPFAAALFDVLSSAHIDATVCTATFRLSHRRLPLWAHAVIQSDGIFYDSMGVFNHDVVRKRQRIHKNVRTELKLEKDIRDFNEKEWSEMHKFYYEALSKSLNMQISKTTSPS
>NZ_CP039845.1|WP_160255890.1|61397_61790_+|hypothetical-protein
MLRIKASSEYCIRVNEDENSSVKADIAISLPYRFEEGDGHALIHMVDEHGNTRGIIEIDFPSPGSNMRSILYEIMDATRGKISEMVFDLFMFCDTESAWAEPDAKIEAPTPDLITICCTNGASFSFQKPA
>NZ_CP039845.1|WP_160255889.1|60932_61331_+|hypothetical-protein
MALKSHRWVTLAAIASLILTPITPEIALARGGGGGHGGGGHSASAGHSASHSDAEGTSSSSHTATEGGKETSSNINSHMVTRRNWFHFFSWKRQSPSARGGSQSNPPSSAYPDECSKGAANKGINPRCPQST
>NZ_CP039845.1|WP_160255888.1|59808_60798_-|hypothetical-protein
MCIEDSKYDLSAVEFGCVDFALQATQKFGPIQNALNARANKKPWNWCENDNNWSRAIKNEAIEMQDHIGWKWWGHSTPHFNRAFMEVVDIFHFWISAILQVRYESTKKGVPYLSPTFDAMKSGSDLLCELKEIEKAVNEHLVRRRIQDELPDVQKRIWRQEAINSFIDLMVLKAAKAGLHAAEHDLEANYIQLLHIGYIIQILCIFCGRSVSDLFKWYAGKNALNLFRWDNGYKKTAGEKGYIKIWSDGDAPQEDNDYLEYMILDHKDEGSGENETSSEATWLQKFYDMLAAEYKNVLATKDRNEDRSANVSSWKDCESKKFVESLIAG
>NZ_CP039845.1|WP_160255887.1|58633_59674_+|exocyst-complex-component-EXO70
MSLKVYNGFKVNLHSLDEVADLSAELRTQAAGVARLVIAKEVLRRAVRYVDQTTLMSDKPYFSAISKLSDVVTNLEKAAQNCKLTLAVLERAIRDAGKEQPDELTTLSLMLDCINDVTSRLDIESSTTGIRSSPLRQAICSVSEDILEANRSRSRLPALDVEAELWVFREASEGGCRYFAILHADNRDMYHALSDHPSLTPMPYWSSPDPPDNLHREEWSARSALWKQLLGDAGIPAQNCTTFSLCGYYGLSLFSENGTLSEPAILSYLGEIDISVEARADYWARRQWSNRRFRDLNEKMGTQVPFSQIFKIIDEAKDADVSLEKSQIEAVLPKITADSLITRPSA
>NZ_CP039845.1|WP_160255886.1|58144_58585_+|hypothetical-protein
MEKPSPVILDAIRNIFDKFDEKVTPNAMDVSIVLSTIGESLACRGNNIHSPFERRYSTKLTMPNWILREVEDSDGVASGVLKSEVIKDSLDCKLTQTILYALKYNEIRTDLFFSTTDMTKFINQRLSLGLISLWISEALSLSLSLP
>NZ_CP039845.1|WP_160255895.1|71382_72006_+|hypothetical-protein
MSARKVKMEIPSAIYNEDGVDITNCKIRELPDDLQVNGNAIIYCDSNEYLEKLPTKSNAISFYISGSPKISDFPCLTIPGMFIADDCKGLTAIPDNLQVGSDLIMRACRNLRSVGDCITIGANLDLEQCTNLETIGEGLTVRGDLRLMGCNSLTLLPSDISVGGTIDLTGCNGINIPENIISKYGNRITLPHEYNIIDEINNCPTLS
>NZ_CP039845.1|WP_099541150.1|72189_73125_+|hypothetical-protein
MEQHQHLSSLNYFYGRGNKILKIAIPYETCWHQIWRGKKINIEHDIVINLIHSKGGRIPKAYRSPYADFTRGRRQHSRILLAGNPLKKGSRSPVIIVQDDDTAIFADKTGRSLTPELDYFGQMSIIHHEIGHILQYSQRLRHPLSFTNGTNAIEEAACDIFSLSLTLAMTKDIQSATAYAGIRSDYLLLRQSSALEFEIRATHSRANFERRFAAGLTLLGSLDYLFCANAMDYVLDEWRKSPWPCDIETSTQMAINWIRAKKITPNKTNKQIFKRLIDMLPDIKKASPLVRIFLGKILDKPPKCLPKTEQK
>NZ_CP039845.1|WP_160255896.1|73281_73770_+|hypothetical-protein
MAMVTLVKTVLFGNREEVESYASALNEMRIGMMGENAALEPHEVPDGYHVQSEGALSYESKQSLITTEFQMAEEVSKLFPGVVANVMIINQDMSEAYGRVIQDGTIFPDGSTNLEDGEFHQVWGDDFSDTRILEELEHGAQDAIDLAIHTPRATSEPENVTP
>NZ_CP039845.1|WP_160255897.1|73890_74343_+|hypothetical-protein
MGTEPGVDFCGGVIFFLNTHIIHFIWLIAFIAICFVLYASFKIKELVFAWPVLHKIKDRPIIFLIGRFSYSVGFLYLKNLNIYFHNFTDGKSHKISPTELPLKFLRLMTTADFHADELAYLPRHLTLPIQPHEDNLASLSQLAFAQKNIT
>NZ_CP039845.1|WP_160255898.1|74398_74974_-|hypothetical-protein
MQIMRSLFYGENETMANSQKVQLKTMQDILTLYPEAFDAEGNINLSNRPEIIELPLNMEVVRDLNIDGCTGLRALPEGLVVGQRLNARGCTSLKSLPNNFELPGTLILSGCTGITELPVGLDVEGGIYLDGCISLRSIPNDTRFGEILELTGCEGIEIPQDLLQKYAGFIIVPEGEYTVAPSEHPEREFSA
>NZ_CP039845.1|WP_160255899.1|75109_75415_-|hypothetical-protein
MQVKVKVENIDWDTDGVPAEELGLTTSTEVTVDVDPDSLPPEKIHSDISAMTKCDADYLKDLVLDELSDSSGFCVGGDGYRVCDNGISIVAEPMPVASPST
>NZ_CP039845.1|WP_160256142.1|75999_77088_+|phosphoadenosine-phosphosulfate-reductase-family-protein
MSFDSFDDQYIIPGLEMQAGIEPSAPTTTYFDAPDIDLNSYDNIIVCMSGGKDSIACLLHIIEMGADKSKIELWHHEVDGREGSSLMDWKFMTSYNKAIAAAFNLPLYFSWLEGGFEGEMLKKDAYSRPHLIETPDGLIKLERDKTRAKPATRLKFPQVSANLQTRWCSSALKIDVGRRALNNQARFHHKKVLFITGERREESANRAKYNQLEKHTSDCRDGRYGRHVDAWRPVLSWTEEQVWAIFERNNVISPVPYRLGWGRSSCMKCIFNDATIWATINKYFPRELDALNEYELSFGTTISRNKKSIMEIAQFGVPMEIDDLEALQQVTKREYDLPVFLEPGAAWIRPAGAFIKSSCGPS
>NZ_CP039845.1|WP_160255900.1|77255_77765_+|hypothetical-protein
MFPVWLKDLRKEGCLVGINHYGCEELIVKSSDFFEYNESTDTLSVLKDGVINLIDLSVFTSLRHLSEEESVLLEIRMSCDEKCHKQKVILSCFILVPFFALIQSLYDHKLHLLQKFNAIWYGVTPPTFLLPLPVVFCLIMALLWIFGFTILEMISEAQATRMIHKIQNG
>NZ_CP039845.1|WP_160255901.1|78034_79012_+|3',5'-cyclic-nucleotide-phosphodiesterase
MSPHTPQLPDALTDYVALASQIKKTIESPDPKIQRKEFNAYRDKVRDIVFDHCPPYASPPLVYSDRVTKSLRSVTNWVSLLTGCDKGTKSLVYSMISSATELCGNRREYHNYRHMFDVLLNAGMLTALWFDSFECNVPRNNRNKIFLAMILAAAFHDVVMEYHSPAGTSERESSNALLKAHKCYAFRNHNSEGSNYLRYEVELASRLILGTVPSFRKSLKGSVARLNEEAMRANPSQDLLHECLACNLGAILADADVMDSLCYAYPKAIGQTNRVRRELWSNGIDANVTLEGFYTTLVPDGFISVPGRIFQPIFALNLSRFKPSR
>NZ_CP039845.1|WP_160255902.1|79614_80106_+|hypothetical-protein
MTSEELAAQQANIIDQNSVQILLQTVAKSAFLAGAESKCNMRKALTIKGCTSLVIAQWSTITGVKISHPDDATKLATSVWENALADGENKMSSSNGCPDVDAEAEKLDIISICQSAKTNSANGHPFYGGTLETPGTPSDTSPAGNPAGGDPGNHVISEEMSIQ

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Crispr_ID: NZ_CP039845_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_2

94094-94183

Orphan

Consensus_repeat	Method
GAGTGCTTCAAAAGTTCACACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039845_2

>merge|NZ_CP039845|2|94094-94183|CRISPRCasFinder
GAGTGCTTCAAAAGTTCACACTTCTGATTTTCGGTCTCTGAACTGCAACCTGAGATGCCAGAAACGAGACTGCTTCAAAAGTTCACACTT

>NZ_CP039845|2|2|94094-94183|CRISPRCasFinder
GAGTGCTTCAAAAGTTCACACTT	CTGATTTTCGGTCTCTGAACTGCAACCTGAGATGCCAGAAACGA
GACTGCTTCAAAAGTTCACACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_160255908.1\|89907_91398_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|107037
NZ_CP039845.1\|WP_124296386.1\|96067_97966_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236378
NZ_CP039845.1\|WP_160255910.1\|92430_93156_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255917.1\|104390_105428_+\|thioredoxin-fold-domain-containing-protein	unknown	unknown	gnl\|CDD\|183262
NZ_CP039845.1\|WP_160255907.1\|85860_89817_+\|damage-inducible-protein	unknown	unknown	gnl\|CDD\|197217
NZ_CP039845.1\|WP_160255912.1\|98257_98995_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255905.1\|82898_83978_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240420
NZ_CP039845.1\|WP_160255916.1\|103816_104272_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255909.1\|91673_92159_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255902.1\|79614_80106_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255911.1\|94524_95460_+\|plasmid-replication-initiator	unknown	unknown	gnl\|CDD\|309782
NZ_CP039845.1\|WP_160255906.1\|84036_85029_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255915.1\|100385_102827_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236078
NZ_CP039845.1\|WP_160255913.1\|99061_99412_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255904.1\|80746_82714_+\|shufflon-system-plasmid-conjugative-transfer-pilus-tip-adhesin-PilV	unknown	unknown	gnl\|CDD\|309860
NZ_CP039845.1\|WP_160255914.1\|99446_99788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_099540246.1\|99792_100158_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296370.1\|103384_103729_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296380.1\|85274_85595_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255903.1\|80288_80750_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_160255911.1\|94524_95460_+\|plasmid-replication-initiator	gnl\|CDD\|309782	pfam04796, RepA_C, Plasmid encoded RepA protein. Family of plasmid encoded proteins involved in plasmid replication. The role of RepA in the replication process is not clearly understood.	1.92981e-38
NZ_CP039845.1\|WP_160255915.1\|100385_102827_+\|hypothetical-protein	gnl\|CDD\|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP039845.1\|WP_160255904.1\|80746_82714_+\|shufflon-system-plasmid-conjugative-transfer-pilus-tip-adhesin-PilV	gnl\|CDD\|309860	pfam04917, Shufflon_N, Bacterial shufflon protein, N-terminal constant region. This family represents the high-similarity N-terminal 'constant region' shared by shufflon proteins.	8.95128e-14
NZ_CP039845.1\|WP_160255908.1\|89907_91398_-\|hypothetical-protein	gnl\|CDD\|107037	PHA01514, PHA01514, O-antigen conversion protein C.	7.6854e-30
NZ_CP039845.1\|WP_160255917.1\|104390_105428_+\|thioredoxin-fold-domain-containing-protein	gnl\|CDD\|183262	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional.	4.87619e-11
NZ_CP039845.1\|WP_160255907.1\|85860_89817_+\|damage-inducible-protein	gnl\|CDD\|197217	cd09118, PLDc_yjhR_C_like, C-terminal domain of Escherichia coli uncharacterized protein yjhR and similar proteins. C-terminal domain of Escherichia coli uncharacterized protein yjhR, encoded by the o338 gene, and similar proteins. Although the biological function of yjhR remains unknown, it shows sequence similarity to the C-terminal portions of superfamily I DNA and RNA helicases, which are ubiquitous enzymes mediating ATP-dependent unwinding of DNA and RNA duplexes, and play essential roles in gene replication and expression. Moreover, The C-termini of yjhR and similar proteins contain one HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) that characterizes the phospholipase D (PLD) superfamily. The PLDc-like domain of yjhR is similar to bacterial endonucleases, Nuc and BfiI, both of which have only one copy of the HKD motif per chain. They function as homodimers, with a single active site at the dimer interface containing the HKD motifs from both subunits. They utilize a two-step mechanism to cleave phosphodiester bonds. Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit.	2.9032e-36
NZ_CP039845.1\|WP_124296386.1\|96067_97966_-\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236378	PRK09102, PRK09102, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP039845.1\|WP_160255905.1\|82898_83978_+\|hypothetical-protein	gnl\|CDD\|240420	PTZ00441, PTZ00441, sporozoite surface protein 2 (SSP2); Provisional.	0.00875532

>NZ_CP039845.1|WP_160255910.1|92430_93156_-|hypothetical-protein
MNSHHIILNAAARLDMQAPRIPSVKYGQIAPVIFSDDAGNPALTFAFAQSASITLVSLTDSTDPNKDDITTLVALCDVTRVLIPYAKRFPTRYGTAELTSTKIHERSYTLRVQTGDQTNPVIEMTLEISSAPLLQTETEKKRATFRYTLTQGKERTYSYRIDTCIDRECSEGVTQTLRSSLFDIEWHMNKITSREMHVPDLENTRELNAINPSHDWDIAIALARSLIKHPEMWQTTKPDHD
>NZ_CP039845.1|WP_160255909.1|91673_92159_-|hypothetical-protein
MSSDNTNAQAKYSRVKDGLKDVGYHVTYSVMAAIRATIYIFGKAILNIIVLVFGLLIAAMFCDYIYLGSSHENVFFGIFMSIKPFISPTIFFVFILVLLDKLIFEKYDAPIPVIGAVADKNSKSDKPTCYGKTAPGQVAAENDCEHCGDQVSCSAVSSENR
>NZ_CP039845.1|WP_160255908.1|89907_91398_-|hypothetical-protein
MRKQTRDRILFVFIFYILFTLPILLANVYYNDDHGRSLYGSTWSKNGRIFSTVLMNLLDLRVRNILDLSPLGQIMGLLVLACAAVLLTQRLTRSQRPGWFALSMCGFPLAIQPFFLQNLSYKFDALPMLMAQALAVFAAVLPLSWSCRKRFVICFALLVGVMGFYQTGVNTYLALAILVFLSDYEYGETAKAWGDIGIKISSFLVAAVLYKDLIIPATIHGQFERHLAVTLDLKTLPFHELGENIYNILALTSVLLTQGAKPLLLGLFGVAVFCSLLNAVKYFRQKTISDFSVGILYCALPIALLTLLSGMLLILKNVEYVPRILTSFSACIIFINLAFMRGFLRKLGWVPLIPLVYYFVISFSYGNMLAENSRFELFHVQRVSSALMDMGYQGGDNLFLYGEEPLSPIVKNAIQAMPILGKLKPDPAIHDDEYFGYTILRSRGIEVPDHTSQDWLQAKECLNPSYKVYETADFMIFRKDHFFCVQEKNKSSELKE
>NZ_CP039845.1|WP_160255907.1|85860_89817_+|damage-inducible-protein
MSKPSNHAVLSYWRAALLDDAQMSISFKNDELVAIDRNILSRGVIPKQQNDILRLKHPKSKDLSPEDPITVMAGLRVLLGERNHAAQNTKSPVLFCMAALFSIEPDGTIKPCIDSPPWINRELLEPSDARILIGDVSVMDAWIEENPPKTGSLAALLEWSDGLWNAVTAHGLPEKYTPWPKVPLQAAESSIGMMATQHQRKFYDTIIDDEGLITPLLDRYLSGSTTPKDVTEALRWNAASMPRGTMTSAYGMSPSQGEAMSAFSELKKSEILAVNGPPGTGKTTLLQGIVATKLVNSAIKNHEPPVIVGTSTNNQAVTNIIDAMKKAMNSGDVRPWAKRWIVNADSLGLYFPSMEKEKSAIEAGYLIASMGRSLETKDWGGFPERERSLEDAQQARETWLKGFYQTFRPDRLFNTLTQAECGEEGPEGVDILTSIENGIDEIREVMSSFCDLGQLIVLQNKFIHDLFAANGCSTTEEIKTCIEECDQKISERKPKEDELRAELKTAENHFITCRDAAHQAKQNTANSKAKLDAEVAKAEAEANEAGKHAIDLIAALPEGGLFSNFFSGKKWPSVEKLVASGAYAEHFRPLMQSQSRVREQWLETINKLTENTDAQLAEAKRRLETFTKKNEVEMKGIIERLSHASDALSQAKEAFNEYTFATYNLAENRRNKLLSALQNITNLRTMIPVSIAEKISNTKWASSFGLDVPGPWENPNWNGSLLAVEDFLDRTLRYALFQLALRYWEGRWILEVEALQDAIGRNDNKAYPFRVGEKAIKAMYRRWAMLTPLFIITASSLPKLPKFRKREGDKFVDQYLLDFFDLLIVDEAGQISPYQLVPGMAFSQQAVVVGDVYQIEPVVTTSHATDTGNARKAGVQPYFWDDDGPIDPRVVTAPPGNGNLMGSVMRVVQQATTFTSPNSLVPGIFLREHRRCRKDIIEICNELVYKGQLKPMTAEPKEDPPLPPLSWANVNGKAERVGGSQRNLREANAIANWICESAVEWEKFYKKPIQKIVTVITPFGPQRDSIKRALMMLGKQSRLSNISKIKVGTVNAMQGAESDIVIFSPTCDKTSNTNFLESKKSLLNVAISRAVHSFVVIGTMEIFERNPSSTLGILGKALFSKGQELGGVRGNWSAEDSVVLSGHRISTPDEHHALLDEALKSLKPGEEIVIVSPFLSASAVNSPAIQNGIRNAVARGGLVNIVTRAPTAIEYRNGTSPELRKSLQDAGAKLHDIKLLHSKTLMTSDFIAEGSFNWLSVRREEPNKANLDSTWVLKGRKAEAAKEAALEELNALLSSQGSSHPTEVGRLLARSNSRATQH
>NZ_CP039845.1|WP_124296380.1|85274_85595_+|hypothetical-protein
MTDHKLSEVDKLQAELEAQEKRTAELKKQLAEAHRERACNIGEALLDLAEGHDRWKLIVGEIASRHMKPRKSAAFKKEASLFEDHAQREREKKKDASQDHSVPGSL
>NZ_CP039845.1|WP_160255906.1|84036_85029_+|hypothetical-protein
MAFLEAPVESSDIRLLKLLPLVILSCALVLVFPEFAMAESTLGGAIGHFGGNINGPFWKLLMVASLLSGLGCIYKGLKLLIMVADGRSHHVISYAPPTGMLIAGALLVAIPDTMNYGIASFFGYVTGYHGSTYDTFGNPSDCISSTTALTCAAKNVRTNIVPVFIQVSFVLMFLVGGWYLYTIILSAAHEVGSGRPLSRNLAFRGLVAFLMMNMSALMAFGLASLGSSDNPLTNTGFNGDSDMLSYTGSSNISIVQNYSELIGYTFAILAMFGVAAFWKGLFILKDVADGNARTGPGTAFMHMIFGAGLTSIKWLGGIATMSIFGRNLFS
>NZ_CP039845.1|WP_160255905.1|82898_83978_+|hypothetical-protein
MDQDCPEDATIIECIEKLGSAIGIQAVIRRALIIGMEALSSGAVNILSDDIIAETSQAISEMRKRSKLSRQARKGERRNHRRRRSPADVFDDLRGQKEERNKPTSSEENSTIFLLPPPKEKPEEKKGPPAEHLNTQDTCSSQTGSVEKPDEAEITEPEEKLDPSIDNTPSDDLESGHDKTAPVEETVEENGEGSSVAPNTGNTGSNPTDILPKNPPPQLHVPSIANGASETPSPSAPPIPSPEQDYEGKGEINSPLISQPSDIDQKPSMGSITDIPILSNGESSPHQQELNAKTITSPQSYSSNGKDIPDVNPKEKRPFGYSPDIESILREHSVSLSSASHTEIAHPPSGAKDETQQGL
>NZ_CP039845.1|WP_160255904.1|80746_82714_+|shufflon-system-plasmid-conjugative-transfer-pilus-tip-adhesin-PilV
MRDERGYTPLQVSGAILVMALMTPVLADMANIQVRKMKDASAADQMQEVYVAAQNWVKDNASQLETLVGDAGGVYQLPAGRQSENETAPAESLQGQGYMPDGFVDTNSYNQHSVMTIWPDANNPSGYDMMVYTVGGNTIRDGDISRIGQKLSAAGGGYFNSATPNRPSGTVSGVDGGWSYPVDNLGGDYGTPQPGHIAASGQFTINGGLADFLYRNDIGIHEANTMHTNIDMTGNRLDSTGEINGRNPSTGTNSNVAVGSKLIGHNWTDPSDTKVYVANSLGVCAQQPDLEGCGVTVSPGAGGFYKNGDWLAFNGTVSGAGLHVTGPGNNFQVDGGSRLVGEITAETGLDLINGGPITWSKTAPGLVVLGDTAVRNSILNSQLHIMGAPLAVDAMSYLDGNATTRYVFDTDDTNYYLHPSGRSQLASAQFSGHIGTNGLDPDSGYPASWADKGLHTRDVYSEGTIAAGINGNIAASLSGTSGNLYASGTSQLNQTVNIGTVNGSNPRANLALENGDVWVNDGNIVVNQYDNDGTYEGGGGWFQSGVTIGKSPSNNYGHFSATSRGADLSVFGNQYLTGALVFSYGVDNPDLFDGESNTATGGHVGVGDCTVETTGVGSLVTDSDHTGLYFCSADHRYHKLQTVDGYAGQNGWPGN
>NZ_CP039845.1|WP_160255903.1|80288_80750_+|hypothetical-protein
MRKSIRRHFTIFIHATCISLINKICYNFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFRLSGFQAFNQ
>NZ_CP039845.1|WP_160255902.1|79614_80106_+|hypothetical-protein
MTSEELAAQQANIIDQNSVQILLQTVAKSAFLAGAESKCNMRKALTIKGCTSLVIAQWSTITGVKISHPDDATKLATSVWENALADGENKMSSSNGCPDVDAEAEKLDIISICQSAKTNSANGHPFYGGTLETPGTPSDTSPAGNPAGGDPGNHVISEEMSIQ
>NZ_CP039845.1|WP_160255911.1|94524_95460_+|plasmid-replication-initiator
MGLIHDVIEEQGRQAAFNLDFPRPEIEAASSFMSDEDHRIGFLYSGWCQAALPHRRLADDSKGWQIDSDHVCLIIQPGMRRGPTGNPIHVGVPYGSRARLILLYMQSEAIRTNCRDIELGKSLRSWMKRMSIPIGGKNLEAVREQADRLSRCQLSFEVVNGRTRGITSQKIMESSMFLEPDPNIDTVDDVFMLTAKLSSEFFEGLKKHPVPFREAAIRALSNNSMALDIYSWLAYRLHSLDKPTPITWKGLKAQFGTAYSQMNNFRLRFIPNLKLALAAYPEAIVTETDGKIGLTLHPSPPPVRRQIYAVK
>NZ_CP039845.1|WP_124296386.1|96067_97966_-|ribonucleoside-diphosphate-reductase-subunit-alpha
MINAEGVAGRVGEHCEKTDYNKPEDTVCVPGHFPVVVDRSRDQLLTPFGKVTLQTRYLLPEESYQDLFGRVASYYGADIHHAQRIYDYISQHWFMPATPILSNGGTNRGLPISCFLNEANDSLKGIVDLWNENVWLASKGGGIGSYWGNLRSIGENVGRNGKTSGVIPFIRVMDSLTLAISQGSLRRGSAAVYLPVWHPEIEEFIELRRPTGGDPNRKALNLHHGVLVSDDFMRAVEADKQWALLSPKDGSVIRKVSARSIWIRILTARMEQGEPYIVYSDHVNNARPEHAKLAGLEVKTSNLCAEITLPTGIDHHGKARTAVCCLSSLNLETWEQWKDNPQFIEDVMLFLDNVLQDFIDKAPEDMAKAKYAAMRERSVGLGVMGFHSFLQAKGIPFESVMAKVWNRKIFKHIRAEADLASEKIADLRGPCPDAQEYGVHTRFSHKMAVAPTASISIIAGNASPGIEPITANVFLQKTLSGSFTVRNRHLQKLLASKGKDTPEVWSHITINKGSVQDLDFLSQDEKDVYKTAFELDQRWVVEHAADRQPFICQAQSVNLFLPANIHKRDLHQIHYMAWKKGMKSLYYCRSLSIQRADTVSKLASKDDLEVDASKVHGSSAPTTDYEECLSCQ
>NZ_CP039845.1|WP_160255912.1|98257_98995_+|hypothetical-protein
MITKSFLDRARHEGKTIEAMALTADINPKDPEGMRRFALWISLADYGVNFDIPEMVALRMDDYISSPADEYGSTRPADKQTALLVAFMEACTEREMDFAEVRIAAGLPDSKRFRRWISQVKEGVTPRIPEETRLAMSEWITENNISVPPDILVNREMAGVRDLVLAAHKINEPEPTQTPLPKIKFSNLSGETKSKPHTSLQEMTLGSPDREPINEERPVFFTSKELNEPITSHDEGAEFQLSLGL
>NZ_CP039845.1|WP_160255913.1|99061_99412_-|hypothetical-protein
MSRNIRRSDPYLSDRNQTRQAARGIGAPTFLILCGVICFAGYKIADKFAGPDSPIRVILTNHIDDMMDGAKDWLRERTGMGKEDRLEKQNTDLSRMVPEKPSYVLRPPDAIDFNDG
>NZ_CP039845.1|WP_160255914.1|99446_99788_-|hypothetical-protein
MSRKLIFIPPVSGWTEPYSGTVPQQRSLPVFEPVIVSHVKQKQAIITPQNPSNESRTQEESGVRIPNLASPHVITQQNQPPIELTDSNIRDDVTHSGKVSIFLEDAADLQIPY
>NZ_CP039845.1|WP_099540246.1|99792_100158_-|hypothetical-protein
MAQWRETFRSPRIWKLDARVALFALPPLLPIFRKLTLTIMVFALITIWVVEIRYKMNFASAMRYIRSRIAGRVRKQTSRNLSWIDMDIAELDKNIREKVEEKEIKGNFFARILSSLGFKIQ
>NZ_CP039845.1|WP_160255915.1|100385_102827_+|hypothetical-protein
MAEDIAKAIAAMTGARPEKNTSEGCWVVGEDRVAWLYGHCYDSAPPEEYNPKWKNRDIEFLPIDVGFSDWKININKPPPPKDGRPPLNYEATVRRVSKLVSQATTVINSGDAGREGQLLVDELLNERGFDAWGPNTLRLWCSSLSKNDLIAALKVMKPNKEYYNVFLEARSRQIADWLYGLNLSRLYTALARQQGYDVNIRDGRVMTPILGMVVRRDLERANFKPVKFFGSVGHFKHENGEFKAKWQPPKGAAYLDAEGRVLDQNVIKELIAKTSGKSGTITSFQKTRKKTSQPLPFSLATLQILCSSRFHMSADETLGVAIKLYDEYKIASYPRTSSQYLNNALAEDIVPAAMKAVSSCSAFKSLASGVNLKIRSPAWNDSKVTDHHGLIPLGALTEEIYNKLPPDVKQVYDVIVQRFICQFYPPAEADQTVLTVLCEGETFVGRGSVPVSPGWRKVTGSADDDDEDNKEPEDIFPPMKNGDPVESIGAEQTSGETKKPPEFTDGTLIKACMTPYLHEPDPILRKKLKDGGYVIGTEATRAAIILKLLGMSGSDKNMKQTDKNPMLTRIGKSKIVSTEFGRSLIASYPEEEYSLGMTALWEAGLGAIGQGQVKPQIFLDRLMGTIRERIKDAPNIKLNLRGLHVIQPLPGNGEECPNCHKGKLVTREFIPKGKRTPERYLTCSLASKDGECHYVKFQEKEKPKPKPIAGDGQQCPKCHKGHLITREISKPGPNKGKKFLGCSEKECDFTKWPDPPPLPGTGDACPKCHKGKVVTRERKPKAGEKTSTDRRFQCCSIRECDYVKSQNSSPKKR
>NZ_CP039845.1|WP_124296370.1|103384_103729_-|hypothetical-protein
MAKVLTPSDLAGVCQKMIDSPDATQEQKKNARMFLTDLENTMRFGSEMLAHSLGVDCKSPNMQVDSDSLGCGYICATISVAPQSENEPIPSELKDVDPEGDWEPFASPLDAPSP
>NZ_CP039845.1|WP_160255916.1|103816_104272_+|hypothetical-protein
MVSRAFPTQFLLRLMAEGGFNAGPIPAGLAVSSPRDLDNGLSQIVYLIDPYSSDEEQDQSIDRFAIEDAGDVWPMMQGALELPNLPTDVPEIKRLMDDFDISWQARSFAFATFIPVPTEDDKISQIKTLLATQRMILFLTTLNSIWWQGQS
>NZ_CP039845.1|WP_160255917.1|104390_105428_+|thioredoxin-fold-domain-containing-protein
MKSKRIGLLAGLALAATFSFDAFADTVPSAGSEGQVNTSNVPAGKDLVSPGLASRLVSEDPSKTPQFIKYLLDRGMFLTSLPPTISGLEGYTVEDKSGRDVIMYITPDGKSAVVGVMLSVGNGLTNGQPENVTAIQLASLRARLVAAKEKGETKNLPSDAKQAIDNNITPVSAVSVNDPSLAKPFMTTRKASDFQSEMEKTKYLSIGYNGKPVLWFVADPQCQYCHRAWGKISQLVMTGKISVNVILIGALPGSSTIARDILSRNDPGEAWMSGEGSTDDGYHPSSHNPSGEAASKADSYLAANMAFVRAEGVKRTPWMGYVGKDKKTVYTHEGADQIEAFLSGI

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Crispr_ID: NZ_CP039845_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_3

127726-127804

Orphan

Consensus_repeat	Method
CCGTGTTCTCAGTGAGAACACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039845_3

>merge|NZ_CP039845|3|127726-127804|CRISPRCasFinder
CCGTGTTCTCAGTGAGAACACGGCAGTAATGTCGATTTTCTGTTAAGCAGACATAACCGTGTTCTCACTGAGAACACGG

>NZ_CP039845|3|3|127726-127804|CRISPRCasFinder
CCGTGTTCTCAGTGAGAACACGG	CAGTAATGTCGATTTTCTGTTAAGCAGACATAA
CCGTGTTCTCACTGAGAACACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_160255920.1\|113236_113851_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255930.1\|136977_137616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255931.1\|138626_139265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124297579.1\|119616_120114_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255932.1\|139474_140503_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255923.1\|120423_121233_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP039845.1\|WP_099540263.1\|119102_119387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296363.1\|113974_114283_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255919.1\|110449_110845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296353.1\|133468_134707_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255927.1\|129569_131306_-\|type-IA-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|223624
NZ_CP039845.1\|WP_160255929.1\|136086_136974_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255926.1\|127814_129290_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236140
NZ_CP039845.1\|WP_124296352.1\|134733_135828_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255924.1\|121151_124820_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|235554
NZ_CP039845.1\|WP_160255922.1\|115225_119041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160255925.1\|125547_127608_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP039845.1\|WP_160255921.1\|114286_114982_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273662
NZ_CP039845.1\|WP_160255928.1\|131333_133430_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296349.1\|137686_138217_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_160255927.1\|129569_131306_-\|type-IA-DNA-topoisomerase	gnl\|CDD\|223624	COG0550, TopA, Topoisomerase IA [DNA replication, recombination, and repair].	2.91107e-22
NZ_CP039845.1\|WP_160255921.1\|114286_114982_-\|hypothetical-protein	gnl\|CDD\|273662	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created with the knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly related HAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity].	8.34263e-07
NZ_CP039845.1\|WP_160255924.1\|121151_124820_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP039845.1\|WP_160255923.1\|120423_121233_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.7713e-35
NZ_CP039845.1\|WP_160255925.1\|125547_127608_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	2.63812e-110
NZ_CP039845.1\|WP_160255926.1\|127814_129290_-\|hypothetical-protein	gnl\|CDD\|236140	PRK08026, PRK08026, FliC/FljB family flagellin.	0.00371182

>NZ_CP039845.1|WP_160255925.1|125547_127608_+|ATP-dependent-helicase
MSHLGFLDTLDPEQKSAAESSAGLLVVIAGAGCGKTRCLSSRAAVLLSRTKCADSIVACTFTRSASDSLKRQVIEIGIPGAENIRFGTIHSLAASYLRKNPTLAGLKRGWTILSEDESKDVLKSVVNDMSPEDDDRLKMSQSSKLRLFFNEITRLKENGVGIHDLGQCLKSQSIGPNYVSVHPLTFEIYREYEITKLRLNSLDFGDLAIRAVRAMVKNPSSVSAFNVKHLLVDEWQDTNRAQLDLVDQLVRSGSSLSVVGDDDQSLYAFRGALPNLMENTPSLFPFLTDVAGCDVVYLRRNRRSGSNILSTACCIANKNPRSHLKTLTGVREQQGDVDVRSYAGDRSEGLSVAYDVEQLIASGVPPREIAILSRNRITLKNIEKAFLLKSIPHKWRGGFSLIRRSVSTDIMSYLKLALNPYLDIAFKRIASRPARGLGPTAVMAISGYMADTGSSVQEALAHLIESEGVSSRTQTGARKMCLQMGWLENAGLSGTPVREIVEYIISDEGIGYKSWLASKKGKDDDDDSLSVLADFCDLTSMQEDLAEFLTMAELSASVDDNSYPDGMVYMGTLHGCKGLEWDYVFITGMEANNFPSPTASRFQKRWSRFNTGDPSSIFEERRLLHVGLTRARKSVRLCYTRTRRAYGRPVVSNPSPFFGECELLVPSLPPIEKGNKRDTDNPSPTL
>NZ_CP039845.1|WP_160255924.1|121151_124820_-|DNA-polymerase-III-subunit-alpha
MTDPFIHLRVHTTYSLSEGASYPKDLLGLAKNLNMPALAISDRNSMHGVFDFSMKAKDYKVQPIIGIQLSVSLGSKPGSLTGNIILFACTEQAFHNINALHLRASRSEFASEGLPIECLRGYTKDVICLTGGGEDGLLPLSMNKSSQLGISCLRTLLEIFGSGLYVEICRNAPPSVESEIVEKGLIDLAEGQAGEVVCLDGIRRDKIPLVATIDTWHATPEGRDAWLMLRAISSGGRVKMLNDGTLDSKAPQCHLRSQEEAKKIFEDLPEAVNNTWSIARRCAFMVMKHKPTLPAFPVPEGQSEEEFLRVMSLEGLRKRLTEIELPEEEHPKYLKRLDYELGIINRMGFPGYFLIVADFIQWARRQDIPVGPGRGSGAGSIVAWALTITDINPMEFGLLFERFLNPDRVSMPDFDIDFCKDRREEVRSYIATRYGEDHVGMITAFGKIKGRTALQDAQRVLYHETYGQAAYGFMTAIKDVLPQHADPNKKTESMPILEAYNTNDAFRAKVNEEPIGPILCRMAGKIEGLIRDRSSHAAGAVIGNTKITDITPVIYDPKAGQNGFLVCDFDMKGVESVGLVKFDLLGLVTLSIIHKALLFIKQMHGTSINPSLIPRDDKGVFEMLSEGHATAVFQFEGGGMRDALMKVKPERLEDLIAIVALYRPGPMAYISTYVARKEGEPYETPGGDRCKPILDETYGIMVYQEQVMGVAQEVAGYSLGSADLLRRAMGKKIAEEMKKQEHTFIYGDPESNPPIPGAIARGMTEKDAIKLFNDIKPFADYGFNKSHAAAYAWVGYITAWLKFHYPAEFLAAQISYYDKPEKRSLVKEELDRLGIRMLPPDINFSCTDFRPERDEKSKGGIGVRFGLSAVKGVTDEDGAFEAERTKNGKFKDLSDFMTRVGKITTSDQRSALVACGAFDSLWPVRSQAEEILNWIAGDKGKKKKEELSSDDIFSATGVNAGIVIPEKFKEIAEWGNRADREYSAVGFYFGRHPLDRYLKRMIKGGVRRRRSIVDWLKANNKERINSRRLAVMVEDVKRLRSRKNTEYILLIASEKNDSYTASFFPSNYNQNGGWSLDHIFKVLQGAKISRIPVIMEASISWDGTRSSQFINAVWTANEFLEGVHGDLTVDIKSTEIPPDAALMMSGGDDADILKKVVEKTVKRVEALFLPKTHEKGSAVRIRIDGDSSELIELPGRYLMSNPLEGALMSMPGVIGIHDSLDE
>NZ_CP039845.1|WP_160255923.1|120423_121233_+|response-regulator-transcription-factor
MRLICIGDSEKNLDGRPCSALSEAISLGEIYLRICGREGAVGAIRESPIDIAVIQQTAPNPRLLRVLRNNKVSSPVLIIARNINADSVADVLAAGADDCVSINIEAVELLARLRAIVRRVSGVGITSQMITIGRMKLNEDTREVLIDDEAITLTQVEYKIMSLFAHRKGGILNKDAIMSHVYAGKNLPQSKSIDVMMCRVRAKLVEKGIKAPFKTIWGVGYRLVEEAFAPLGSRDMNPDPHPHHSSNESCMPITPGIDISAPSKGFDIR
>NZ_CP039845.1|WP_124297579.1|119616_120114_-|hypothetical-protein
MLRKNHGSALVTNGANLTLPDGNKRSKSSFIFTAFINNIAKRAAFVASFLVFSLFMLPQSAWAVDQESFGGMANNIVQQGGPGAKVVLVLALIVGLATIWAGGKKIIAASDSQGREPFGPGITRCCIGGLLCVLSTFALYASHTFTDGNTTSVSVGTVNGLEGGD
>NZ_CP039845.1|WP_099540263.1|119102_119387_-|hypothetical-protein
MSIEHHVPKKWELYWKLEGRMGACISAARDLSKTLKSSLKKAQEKMRDGGDIKTISKAFWDEMDLVMEFHSRAGASDHPTREQVSNAFDKAVMQ
>NZ_CP039845.1|WP_160255922.1|115225_119041_+|hypothetical-protein
MDQSATSSRMGAFARAWQPLPVRKGAQPLPVSDRSIFDRDFRLETAQTVRSSVRVMASRLIETKVTSLPPPYWKEDLVEADLNGKTQVHYRPLSKGESTDAMIPRSVASELYEAIYNLQSRVGDIDDWMASRLQWTKEHLYKVLSAEQIDTAALAIHAADSAAEDKAKGLPSSASGGGVIIASMTGFGKGRVLATTCRAALLSGRNVVFMTLQENLFSDFWRDIRGIESEDLFGRPLLVNEGSTIVDVEDPDTPILVEPYSRKQVLQSINDKKLPDGCRMVMITHSQVNRPGTPRSDFLEAVAAGAHFALDEAHKGAGESNTRENIDRVRAKAASTTESSATFAADIANLTAYTNVMPWLKDIPKLSSLPRPTQIALSQISVREATSAGGIVRHELDMDGINTEIIKPSAEIIAFNEQISDSVAPVLSAMAVMARDVDALLKMKNMENADYCKTLPPSMRKAAKETWFTAPFGSRLSAIQNQILTALNVKLCAQVALDSLKNGEKPIAVIEATMESIMNQLRAGEIIGEDDQVLDPDPPTLKVALFRLADGLSSALHKYTPEGESERVEERIDISQEYDHLSEQLKRIKHLIGGIKDIPLYPIDEIREIVERHKTPDGRNYVVGEVSGRSLQIRDGKYVKNQINRNQVVARFNNGGVDMATFTKAASTGLSVHDKFKKSGRSHMIWVSLIGDVKEKRQMEGRCNRRGQRTKPRFSVLHTGLPYNTFVLTNGDRKEAKLDANLTGAETSGVTTGMPDPIDQIGEDVAREFLFLNRNIANQMGINLNVTVSVSEKELYFVNKLFRRLPLVSVSKANNIIKAFFAAYEDRLKYSINPNLVQSLKGNWKPVKSFILQPGDGSDHPLRGPDTTATIISKMVLKKPMRSTEVGKIVREARQRIRKDYNPQPYLQLLEKRRQKILENALDGEAHKSVHAALMAPRSNYVQVIQKRLNITAWFIEKALPGCGVILPDDMGVMQPHIILDIEHPEVSRVNVFRDYHITVLMPGASEPFVVSLDAIMRYSGARFMDENEARNSLLNQCNQAPEGEVPVFRTILDGNVTAAILDAHYLELGEAGTWIDQNSRINLSVLVPKSIEKHLTTVPVRIPLPEVGLELIRKNARLIIAESLSPKNDNISIVASKKAGFVEVSLPQKKKNLPLFASAAYQRLVIEPGNTKEYRERHPNKIISEDGFSSDDVREIKIEHLPELLHSLYQEGKLTFYADSSLRNEVIRLCHEHKARRVRRPTNQKELEMVDSDLDREKSFTNPATPFPSI
>NZ_CP039845.1|WP_160255921.1|114286_114982_-|hypothetical-protein
MINEDVNFVLDIDGVILDYVSGFMSWMRERQGLQTIVAPHKIERYDLSPYFHRDGKQITFSEFRERVSQFSLTEEFKHIPAFEGAEEFLQELSNSGFKIHAVTSCGNEVAAKSRKYCLERYVGWQSNWPLHVLPLGASKQAILSKFPKGRTFFLDDLHSNIQDARKVGLTAIWHKSAPETVYRDIGEGDILDETHTGSWIELKQKLEDHLISLTASPDQSFTVGNHSALIG
>NZ_CP039845.1|WP_124296363.1|113974_114283_-|hypothetical-protein
MIESSYIWEVGSFGIIWDKKAFTCTEQGSTCAETIAAFAMSNEGLALAMVYIDGVNRRRTGERLTKREDRDAQVRTLEHEARRIFALGRQKAHAAWLDRVGE
>NZ_CP039845.1|WP_160255920.1|113236_113851_+|hypothetical-protein
MTIQAPSQHSCNDYFNRIRDFLASIGITVLLQPLPKKGFFSRTYISNTTIFVSENSDISLGEVLHEAGHIATMPSQFRHLIDGDIEAPEILEAIKQYLDEHFHDQLSCGLEDPTCRAIFQIDDPAATAWSYAAALECGVPTEILFCDHESFGGLKQSREIHHMLSLNAYIGINSLAASGMTCQRTAAKFLGKKPFPHMEKWMQI
>NZ_CP039845.1|WP_160255919.1|110449_110845_-|hypothetical-protein
MTLVIGFWILQTFRTHHKSAKDPKQRYISNSEIILKGLSDLSCGANNTKVKAIKDGQGKALSFEIEEAAKLDDTFASQARHHLVERDGSLCFDHVGNKGFVRVQHDPRGLPWRRGGRSPFPSSRRSQRIAV
>NZ_CP039845.1|WP_160255926.1|127814_129290_-|hypothetical-protein
MSTTNLDTGWGANIPDLTSEEASAFEQDALTQAAIEEIQMNSDSSYVPSDNAIDVVVDKYGLGSELQTIVSNSGGTYIDPDTRSATLAATSSTDSSSTTASTVDTGITGISGTVSTDPATYGEIILDNSAVTPSNIPEQYKELGYIPVGIMDAMGSKIYLDGTYAGEQDVTVASGSTISLDLEKTTSKITSDGGSLAAQGPSDATIVGSYDNLNLSGLGLQSQVNASVSGNVVLDDVYGTVGLTTTGSNAQIISEDTDLSVNGNGGVLDADGNTLTASGTFNSFRINGVSNANISLGLTGNGMITDSTGTIGATLEGSDANFTIDGAGYDYLTAGQGSITLNNEASANITGVNSNGGDLFINANGGQINYQAQTDVNATINLGNGNAYLTYGEGYTATEVNMADNTMADITGFAPSNGELLATNLKSLTDVSVSYKDNNAYVSESGSSGSIVLHDVAQGGVDILTSLNGTNFTQEYGANTVMIALNDKAAA
>NZ_CP039845.1|WP_160255927.1|129569_131306_-|type-IA-DNA-topoisomerase
MTNEVWIIEAPGKKRYLEETLKLLGRDAFVVFTKGHLYRFPLREKGKKSSPIIDKNFNDFGREPLDSNILHRIREVVKLCPNVMVATDADQEGDVIAWDVACLIRDIAPNPSRIPLKGMDSDSVLEALSAKGPVKRSAAVPGRTRRIIDILIGSAYSNTGIRVGRIGTALLGMVASEQPTTNFMRLSAPSSDGRSPWIAQCPIKSPITESIAKEIVGLSLPVLDPVETLDRTFKPQHMGEIMIEAAETLGLSPSETAKAMQASYEAGKLSYPRSSSKGISRAAAVKMKSILAKAGKRANPDLLDTKTEKDVHDSPHPLGAVNLSLDPTKMSAEEGVRLLIARGIARAGMKHKYQRAKGEIVEKFLLSKGIPIKAAKYVGSLEWTRDLGSTIPGKKRWQKSEVYKRRSDAVLLETALKHNLGKPSTWGTHVEAFLKLGLVNSDLALTERGKEWLSRSPVELLDPEFSARIEEACDYVDQDIFKVRGKTPWQASAERIVKSLPPAITDRIIGAISGIPAKPEPDYREMVDNLPSTLTPEEMELLAERTGPDAIMATSNVQPFLPEFPYDEGTIPDYEISH
>NZ_CP039845.1|WP_160255928.1|131333_133430_-|hypothetical-protein
MSDGKASMGLKRRTGSIEEQDMEEAYLDELSDDEPSISSAEPKTDAHSAPESDLTETAPHAEHQSHEGPEESSEVHMLLPDPPEDLSSAVMDTPRVPSENTALDSAVVAPPVGDTANQPIQPLEDVPADGVLTENTQKDPDLIIGSSGMSWPSPPATQKVTGVSRSKKMAFDHEPIDVGPDQEHDDAAPTTQKIDSQGWPTPLASTQGLGTQPMPDGSQTIGVPTENTYAQEWPNPENISVQFYVPSPSGGMTSDLVSYIKNADGTYIIDPSEIDNDNVKTYISKGIITPRLGVRTPDGEYHVVVAGTKTADDFMKVQMEYITAGANSNFGPSPFLDPEYISPKQAPPSDRDRTSDHTQDTAYPFAGASAAPGSLNNGGLTSPLLTSQGEVRRKSPALNTPAGKFIAAIQYELDNQRTKTAQDIMRAERMRFMEVRHSPRQALTQKANGKLSLRGRLKLAAKAFTTPSSDPFPNRVENASRISSHTSKALSELSYGRRSVEPRLVDSIERYEKTTEKLSKAIGLLNTVITQDEKFNDYATTVARISSDMSRRTGSSFGPDEVILALDANDLSADIPDFIAENADVAEIATCISLLSEMQSQSTYEIVQGLKDLKKSGIDLRSSNRLSKAFQAFVSENKNVPDSIIPGTGNKLRDQTALLLREVGVDRTSNATSIAPHFETIQIDHPQVVEHGSNSPTP
>NZ_CP039845.1|WP_124296353.1|133468_134707_-|hypothetical-protein
MKMFGRKFLIPCATLAITLSVFPNVAKAGMPVTVDHDPVAIMNSLKNIAQQKLSTQTLSDFINNQTDQVTTDLTNLLQQGVLNDDTNLQAQSQMMDAQDKRQVMLRVEDEKLHATEQSAQGPAGCNIITEVVGDAQVGAARSQWRAEIANGALDYYSEIDTTGKDRSPEKVIQATLTSHCEKSAGALDVSSGMCGNKTQSSLTTDTGTSISPQTGHDLNIQLLSHPRSDTLDHNEIQQVNSLIRTAILASPPPPPPNNSGSSAANRAAYLKRMSIIAQNSQAIDVLSRLAADEAPLPGSDPTGSDFDDSDTSLHTWAERTAASVAGYLPSNNFPHGVSYSAAQKLRSKSWYMNPQFTLAESSANEAQNVKDLTMMTAWHVMQSQEILETLQQISLSLAFILADKQEDRMNSM
>NZ_CP039845.1|WP_124296352.1|134733_135828_-|hypothetical-protein
MSSYQSALIPLEGGSKGFAASGSNGKYLGAFQLSSAALQDAGFENSDGSWTSKAQSYGVDSSSDFLNNPQAQIAADNSYNAKNLSYLQNDLGSSYSSYLNSTDKYSGATLTTGALAYCSESLGHSDCASYLETGEIPADDLAANPSWQNGGWQKNLEEMSNTNLGDSVDTSVSTSTTTDANGNTSSATSVSTMYCAPEVKTAMQSASANMLNKWAKLAEMPGTGYTLVNGMSVLQAGGGLSSSDPGYVSTEGDMYNAGYASVSCLKNLLSTRPMISSFIPSLSDILNQISSAVCNAMQSEFSQLTQPLDQSLYQSIDMDGVVPGLYPGSINFGLSTGYTEGSSSDSGIGSDDIARAANSWNFYN
>NZ_CP039845.1|WP_160255929.1|136086_136974_-|hypothetical-protein
MAAIEMQIKKTKISLLLTAFFALQISFTSTAHSETGQNKDQQLAQKLFSTYLAKHKNVHVDTARLILAPAQSKTTPALLVRFASPQTCRNNACMTTILMPENGNWKVVLEKHAKEIRIQKKVGPNGLYNLDIDGEVWEWTGGPTFYPKVSSLGEDFDATKTKAPNRIAKAMEEILTSPEWLKIHHYSHNDNFNFNGTRIFPNNNASVWFVYAYAGGECSLSGCPSAVILDAPSGQKPLWVGLSDGSGSVSKSSLKQNGWSDILIIRRLGFDTLSYNGQYYKLSGTSYPSKITPAP
>NZ_CP039845.1|WP_160255930.1|136977_137616_-|hypothetical-protein
MRKYLLLASFISGLTFFGVVEEGSAYAETTSTSYWGDGKSSAAMATATDCPPEVASLMNARSRQSIDAYGNLAQNLYTPLEEGGYQTISCLKQLLNTVPFINGLQFTSISQLLEQLGNSVCNALQTKVSDAEGEITSNMSNAMSGASGGYQLMPGVNISGVSGNLSFSEGGTSEQNDAISGIISSDTNGSLFSNTARYPIQSFNNAFSTNSY
>NZ_CP039845.1|WP_124296349.1|137686_138217_-|hypothetical-protein
MPNPQPTLSDLQLDITSIGEWMSSKPALLRAFLASGQPMDSSLCLELTKKISGHAEGQNNITDLIHMLCGDESGVRGLGRPGRFRIMAWLADNERNIVGRDLMLPVLVGDIAKEEMVVPPSISKLFHDDLLRFASEVIAPQSELTLNDPTLSQAIEMGLATFTQEVEIEPSSPVPG
>NZ_CP039845.1|WP_160255931.1|138626_139265_-|hypothetical-protein
MSLSKPHSEKTTTLLAEPSLPRDPTILQRVAWNEMQLRLSKLPVHLHSTWQEVKVRNALSGYAIHIETQEDGPAQKIAENINNYISAEIRNGGIPFEKQQQQLISEAIDNSWNDFIRDEFIKSLHFENTEIEKILPEDETVVTIAQYSDEVDCAVKDLFTRHVGTMCAPEDPDFLSFLSQKAAECPDHEVEIISDLMAQACRKLETPTLPEQ
>NZ_CP039845.1|WP_160255932.1|139474_140503_+|hypothetical-protein
MATKNNLNAKSEHFAQMVKSHGVEFFITFTDKIIFQDTPQTRRLIRDAGLKPVSPFPAEFYSESGLKMLSVEGVYPVEMTNDAEIKLTRGIPGDPTYVQFYKSASEGARRSEGFKITEAQDSVSHIIFRAKGAPEGMFNGLQINEFSICRKYSMPIEVGGKRDPYWDVVISHSSGDSARVRITDPAHLFEYDGSLSNVSLQPLAQKLAPKRMAKIKNDAHWMLNHKIKGVPSHYDISSLQAASGALLLELVERSKHDNNAMVVIGSELSDAVDNVIRDFRIVGGSKLHQEITALDPKDQVAFLVGAYSMRGMNVAELTDDIEHATKFFDASPNAYEPETPSP

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Crispr_ID: NZ_CP039845_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_4

271755-271844

Orphan

Consensus_repeat	Method
CCGGTATCTTCTATTCCTCAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039845_4

>merge|NZ_CP039845|4|271755-271844|CRISPRCasFinder
CCGGTATCTTCTATTCCTCAAAAACCCATCACTGATGAACACGATGATTTGCCAGTAGTAGACACCCCGGTATCTTCTATTCCTCAAAAA

>NZ_CP039845|4|4|271755-271844|CRISPRCasFinder
CCGGTATCTTCTATTCCTCAAAAA	CCCATCACTGATGAACACGATGATTTGCCAGTAGTAGACACC
CCGGTATCTTCTATTCCTCAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_160256000.1\|258631_258922_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|365952
NZ_CP039845.1\|WP_124296435.1\|262300_263713_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256002.1\|260285_261056_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256007.1\|267367_268729_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372018
NZ_CP039845.1\|WP_160256001.1\|259060_259558_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124296577.1\|275774_276269_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256005.1\|264665_265970_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223021
NZ_CP039845.1\|WP_160256008.1\|269027_269723_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378659
NZ_CP039845.1\|WP_160256010.1\|272563_273451_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256011.1\|274815_275739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256013.1\|277026_277644_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_099542142.1\|273629_273965_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP039845.1\|WP_160256004.1\|263800_264583_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_CP039845.1\|WP_160256003.1\|261107_262139_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256015.1\|278335_279109_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133026
NZ_CP039845.1\|WP_160256014.1\|277819_278254_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256016.1\|279108_279822_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176526
NZ_CP039845.1\|WP_124297611.1\|274054_274453_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256006.1\|265971_267357_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319757
NZ_CP039845.1\|WP_160256012.1\|276265_277030_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_160256000.1\|258631_258922_-\|HU-family-DNA-binding-protein	gnl\|CDD\|365952	pfam00216, Bac_DNA_binding, Bacterial DNA-binding protein.	2.66977e-27
NZ_CP039845.1\|WP_099542142.1\|273629_273965_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.39507e-08
NZ_CP039845.1\|WP_160256007.1\|267367_268729_-\|hypothetical-protein	gnl\|CDD\|372018	pfam12293, T4BSS_DotH_IcmK, Putative outer membrane core complex of type IVb secretion. T4BSS_DotH_IcmK is a family of bacterial transporter proteins from Proteobacteria. DotH is an integral outer membrane component and it may form an outer membrane complex along with DotD and DotC functionally equivalent to secretins. DotH is the strongest candidate for the VirB9 counterpart of other T4BSS systems.	2.14483e-57
NZ_CP039845.1\|WP_160256006.1\|265971_267357_-\|hypothetical-protein	gnl\|CDD\|319757	cd16431, IcmE, DotG/IcmE is a homolog of VirB10 which forms part of core complex in Type IV secretion system. This family contains DotG/IcmE (VirB10 homolog) and a component of the type IV secretion system (T4SS), and similar proteins. The Dot/Icm system is a T4SS found in the pathogens Legionella and Coxiella and the conjugative apparatus of IncI plasmids; T4SS is employed by pathogenic bacteria to export virulence DNAs and/or proteins directly from the bacterial cytoplasm into the host cell. Similar to T4SS VirB/D components, the Legionella Dot/Icm secretion apparatus contains a critical five-protein sub-assembly that forms the membrane-spanning 'core-complex' (CC), around which all other components assemble. This transmembrane connection is mediated by protein dimer pairs consisting of two inner membrane proteins, DotF and DotG, each independently associating with DotH/DotC/DotD in the outer membrane.	1.23448e-42
NZ_CP039845.1\|WP_160256015.1\|278335_279109_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133026	cd04183, GT2_BcE_like, GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule. GT2_BcbE_like: The bcbE gene is one of the genes in the capsule biosynthetic locus of Pasteurella multocida. Its deducted product is likely involved in the biosynthesis of the polysaccharide capsule, which is found on surface of a wide range of bacteria. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	4.90857e-99
NZ_CP039845.1\|WP_160256005.1\|264665_265970_-\|hypothetical-protein	gnl\|CDD\|223021	PHA03247, PHA03247, large tegument protein UL36; Provisional.	0.00363228
NZ_CP039845.1\|WP_160256008.1\|269027_269723_-\|hypothetical-protein	gnl\|CDD\|378659	pfam11393, T4BSS_DotI_IcmL, Type-IV b secretion system, inner-membrane complex component. IcmL contains two amphipathic beta-sheet regions, required for the pore-forming ability which may be related to the transfer of this protein into a host cell membrane. The icmL gene shows significant similarity to plasmid genes involved in conjugation however IcmL is thought to be required for macrophage killing. It is unknown whether conjugation plays a role in macrophage killing. This is a family of DotI/IcmL proteins of type IVb secretion systems, that reside in the inner-membrane. It carries a single transmembrane helix in the N-terminal conserved region, has an extra-periplasmic domain, and is conserved in all T4BSSs including I-type conjugation systems (TraM). DotI/IcmL (and DotJ) may form an inner membrane complex that associates with the core complex.	1.75319e-48
NZ_CP039845.1\|WP_160256016.1\|279108_279822_+\|hypothetical-protein	gnl\|CDD\|176526	cd08584, PI-PLCc_GDPD_SF_unchar2, Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.	3.93248e-44
NZ_CP039845.1\|WP_160256004.1\|263800_264583_-\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	1.07119e-08

>NZ_CP039845.1|WP_160256008.1|269027_269723_-|hypothetical-protein
MSESKKTKQARGKRPKSTSKAAEWARSTLATLMSRNYGDTTALINVTRIAVAEAGVILALIAALVYTATRPPIIRYFATDPRGKITALVPLDQPIMTKDALYQWVTSAVISLYTKDYVHWRDQLNSDQENFSLAGWKSFRKDYEKHFIEPVIENNYITSAVPTKAVVLVDRGVRDGRYAYNLQLGITVTFASGIHERSSSQNYIVSVLVVRESDTENENGRGLAIAQIVTQ
>NZ_CP039845.1|WP_160256007.1|267367_268729_-|hypothetical-protein
MTSLYNNVQCVLNKYLRQRHTVSRLIAVGLMLPLSLHAEDLPDGFLPASPVSPVSARVATSPSPTPSEADKDSAIHPEDPTPSPPVLTPSAPLEGKEQNMVPNSTRRPAHHLNPLEHPPVPGRMSEGGREGDAETDGDVPGAGRIGHAGLPPAVDGSTENAYGASSPQKMYANPPSDYGNDGPKGTPDEEAFEKTIKQLAPMNADQIRKERSHMDTVERVQSEPANGVIPTPHSGTISLSLKPGEASPRIGLAAGNATVLTFYDQTGAPWPITSVTSGNSDAFTSSKAGQVGKTNMAVIAPKANYGYGNLVVTLEGLPVPVIFSVVCGSGVVDYRKDIRIRGRGPNAQENITEGSSLQPTNDKTMNDFVDDLPPKGAVSIKTNNPEVEAWRYKHGIYVRSRLQMVDPDWIDDQKSPEGDRVYEIDENTLQGSPILEFLIDGRSVYVDLDINMQ
>NZ_CP039845.1|WP_160256006.1|265971_267357_-|hypothetical-protein
MTEENEEKKSFAQRFMQDKVGIKITAIGIAFGAVVLGYSHFESGHVHNEQVKSDEESSTRQVASIKESGRRKSMTPEDARLSHEQTRLEVKNAMSTGGSETPPVLPPIDTAQALPAHLPSDKDETPSEDPSKAKLPEMPMPDESPGVPMQKKNLASNANVQVKHQLDPDLLKAYEHQASLLQKSKFPSITTVSFEDHHSDGSSGSKGGISGKEGTTTSSGRGVGDGHYLDLNGRWHDEQGSDPWAEGHSKSLADHPSNGNGQTDNPNSDNSTEFELPAPGTMVYAVLLGAVNSDTPGVVIGEIRQGAFNGSRILGSFDFTREGVMIKFKTMTVPYTNENGVKKAKPISINAVALNEKDLSPAMATSIDRHMLETFAVSFASGFLQGLGQAAESSGSTATYGVGGTTLSNAKLSTTDQLLYGFGQGANQLSSQFQSKYGNLRDTIKVKSQTPFALLFLGGDQ
>NZ_CP039845.1|WP_160256005.1|264665_265970_-|hypothetical-protein
MSKNPKNRGFNEDLPGDEDELNQGAQDRHHDDMGPDEVEDEITEEVVTRRRRRSNKSSRDDDDNEYEDGEDDIDKKNKKIVYIAVAAAILASGLWWSGYAAKGYHMIMGGEDPAPTVAHKSPRPHLASRTQHKQPIPDQDRAAFGDGDTPAEANPQLEQSDSQESIPAPRGRRRTTSSARNSVPNNTMGTVDVAGTSPSDIPLSQRAQEMPGSEAPEAFPTNTRRIHPPIPSAGGLGSAQGPSDPDQIPAKIASAQQPSNQEVMNKLNTVLEHLDDLNKKIASLEEKSKNAANNDGISSVNGKLDAINGRLNDEEASMASLKDAILQPKKASNLHKSDDDSASDDDTPVITTPHKSKKHDAQNKKMALHALRGYLLIGVSEGDNPSSVFIRTPGGTVMKNLNDDLGSDAGVIKQIKMSGKSWEVITTKGIIPAG
>NZ_CP039845.1|WP_160256004.1|263800_264583_-|HNH-endonuclease
MAKRKTDQPLLPLILSVKAANWRMNDQDQDHADREFQKIREKALQRDGYRCRFCNFFSRKFQEVHHKDDDHHNNTLDNLVTACFMCHSVQHIGLSGHMKESVLIWLPEISQAALNHLIRSCIVARFTCTETPLSPPGTPPNRKIAPYADGGEILSAAESVMAALQDRSAEAAKLIGTSDPKELGSILQDIAIQRPDIYETRGEILNGIRLMNLGKKMSNDKDVLVEHVRAWIDPKTNGPYSSGLKADSWSEIMRDVLGIS
>NZ_CP039845.1|WP_124296435.1|262300_263713_-|hypothetical-protein
MHNQEDLRFGAVLFDDIESPSSGWMSIEGTQVKRIDDIHQMPSDVIFWTNIAYGPFFSGAGRTRSNLRHAEYLVCKPTEILGEWGYPENTPQTFTPVLMSVMFSRIARLTFGIASKCNPQLRMSEFFTNTTLQGDVGIFLPEAEFPEDEAVETCTANKGFVRFTVTNGVRGPKGGAMIKLRPPRLSYARKLLNGMTPVGPFEFINPQEASGGRRNLAAWLCSQPRPFVAEIAVDDGDPDSASMYGYGNTTDRKKVMRTWVAAPELKALLTIYKKISVRSVWMGKEYKKLSDTLPDPIMKFLNAKISFGSWSAGVVAETIWRAACAGDIRRKMPGEPRANTSWRGAWLFAEDKVEGYQAAKSLYDFGHVVTMYGPGWLNSVVASENVEDLIRDGLTCGLIPPMVDVPDNMMRKDESFVWGGNEDALTLVDCILKKRQQLAWNTDEVRVLPPGKERNDLKQKIMDGLNKGVL
>NZ_CP039845.1|WP_160256003.1|261107_262139_-|hypothetical-protein
MTVSQSQADHVAESPTSAAINEEVNPQTITTPEAETAETQIAPNSPSPAGSSAERVSDERARQQIEQRLQQRINLMRTMMLQATAPEISGQTPGMPTPPGSLVNIQMLNFRLPQFRGLGLKRKLAERRVERALENYTMMLSSMDRIAYAANEYNRTVSEKYPEYAGQLKHYAEEYNVTEDRIAQMLKDPSVDQAQFVSSDGTMTLSEEMQRVANDRELDGMRKDMKVDIERLATNMNDFTAWSEHIKNKPSSPEQEACLTGIMDTINRDIREPIAAMDTLNAEDPEEPGMIENMRDRMRNMFTKLLQTVGKFIGFKPKNPHSGPEVAEAPTVAEEAPAPTPGG
>NZ_CP039845.1|WP_160256002.1|260285_261056_-|hypothetical-protein
MERSKRTGKEKNMIVGYVTTTMPNKLLHIAYTGLSNWDFGRMLDIPDPVEITKRELSSLTEGVFHFKCPKETDYRRMMTNLGNVIRNGSTPVASASAIATDTKNGKTRFDNESLTFSGWVDCKIIPKAMVGTPRKIEQAQMEIIALNETINATIGTVDHPTNWLEFSNDRNLPSVAVVLSDENNRVVRKFSTDIKINTIQLRNGRMDYPQGLIKLEDIAPALREAGKILHDGFEKRQQMREEMEIKKIWEQDAPSP
>NZ_CP039845.1|WP_160256001.1|259060_259558_-|hypothetical-protein
MTSFLYNGITIPERMRHLPIMENGMPLPTFASEAKTILPLNLHTASARLSAMANRRCYICGDKLPDLVSFIGGPDEAMSKLYLSPPVHPECADFIMQACPEISDALAPGNPGFFAVSTTANYEYDAEKGVFLISDAEEVWWSKGQRVPGDVMDILHELTQTLRAI
>NZ_CP039845.1|WP_160256000.1|258631_258922_-|HU-family-DNA-binding-protein
MNTKELCQTVAKKLSCSEQEAKAAVEATFDAIRETLAQASDEGEVSVHGFGKFSVKPTKERMGRNPRTGEDIIIPPGAKVQFTAAKALKDAVSPEK
>NZ_CP039845.1|WP_160256010.1|272563_273451_+|hypothetical-protein
MANRILFSIPVHERPDIIRDQAINILKFCPSSVVVMHLSKGVNNDDDLALFKKAIEGLDGVILNADEGNRVDTGDGHSGIFQAHYANYLLAEKLGIDFSTICLLSSNELLIKSGLEDYTAQHHIGCQTVLSDPTSNWHLFNRDLLSRLQSVGFLDDLEISQFYFGGQAEGQFYRKDVFKKIATIFRNFFPRSRPAGFETEEVIPPTIVANLTVDGGKEMMPVPPITLCDYCHDLSITPKLIEKIRSGWGVIYAPKKNGMLVSPHIGWPSFQTIFSVKRVPREECEIRSFIRSLAP
>NZ_CP039845.1|WP_099542142.1|273629_273965_+|helix-turn-helix-transcriptional-regulator
MPAPQPPSVAVIGAVKALGENIRAARLLRGISQQEIADQANTTRGTLGRIEGGDVNVGIGLYAAVMHALGIVENLPLAADIQNDRGLQVEVLGRVPDRAPRRDARKKNRLF
>NZ_CP039845.1|WP_124297611.1|274054_274453_-|hypothetical-protein
MTSSTLSAFHVTPAENLPSIMRNGLEPRIGPRSEDLGEKYKAIYLFPNVEAMENALGNWMAEAFDDDETLAVIHVSLPSGTFQHNTGYEIEVTARIPPDRIEIICENDALLDREMLKKYDIENGNCLFTNSP
>NZ_CP039845.1|WP_160256011.1|274815_275739_+|hypothetical-protein
MTSSEKVCTSTIDREIAQSSLLSENAFKRLLTLSEDGSIAQSGLHIAFLWGLTVSDRYVLTDSYTSLVNDTCARNPESLLNPNYIKFFEGYFRSHPKIMVLPIRPRKSKYSQDDKDKPYHLSSDGGSPNPADAKDKGDEWVSVLTFIDPSNVNVGVMLFAWGDIKSGFISTRAVHLDLTKLKEHLDISGVQIAAYGDVTNFICGAIKITHDKAFDIYGSDGVPGAEQEAIMLTELPFFLGAVLGMYSKNTRKIRSGVNEKVRTPEPSIAQECEGKDIFLFPPLSAIQSSSPSFAYERRFFKPGLVWR
>NZ_CP039845.1|WP_124296577.1|275774_276269_+|hypothetical-protein
MIEILSDDLRERIASSAPLRPEEVAMVPKEAICILQMQRDPTTRTGLSEEMYLVGLAVGVAVDGLLVHVAVLNKDKEIDPITKPEREDALMAVIEEASIYKKGDNISLLLTPSSNEVVAYAKLPPEDGGDVFITLSDGETQTRNFNEFVDWVKAEIEEDEEDEG
>NZ_CP039845.1|WP_160256012.1|276265_277030_+|hypothetical-protein
MMVSRFLRPLRYLSFVSSLAILGACHAPPVQKTVHMASGAIPLLKNDGAVLQELCDGHSDPQQWDGELSFVAKMDVYALEGGLLSGKHRILTAAFPVGHGLTVTGALDRKGDNPLVHEAVCHGAVMQSLYHYEHDRPFVDWVVTMAPYEVQPDKGTPFSPQSWNASGRISIDVQTGKGSGSFMWSPGPGQTISGSSSLMTEITITPGPQWTREYNEVRNKEFEAAHSAKAIGGASALPDEEPGRTLDEDMRSSQ
>NZ_CP039845.1|WP_160256013.1|277026_277644_+|hypothetical-protein
MRYGLKKNIGLGLASTMLLVGQAVAMDKVVGAAPQYYNGGYNQKDMIGENRNGDGKQPLKYPIKVMTVKVSPGESRQNKLDAIINGAAVYLLRAEEENIGVRISSPSDLIAQNLPPRGSIYKCPKVILERENQIALGVKIGRIPSSMDGDVDIKTNAYVINKAGCPYQDVLDLKARIWSNPEGTMLYLAPTGLNIVSGRDRRYRL
>NZ_CP039845.1|WP_160256014.1|277819_278254_+|hypothetical-protein
MSEIETGAKAKAEHCVKIDDMEILAKLAMAGKVSKPRKKSPPPPPKPKGLAIGGYVLFESLILQKFIVRRVIEITKTHVILKPNRSSTINPREIGFPSVILASLDRKQVDQMERKINRLQDKYLDSLKKLRQDHLSRMRELIGL
>NZ_CP039845.1|WP_160256015.1|278335_279109_+|NTP-transferase-domain-containing-protein
MLNIVVPMAGRGSRFQKAGYTIPKPLIPVFEGVPMIKLVIDNMRPTSSHRFIFVCQREHDTVYDLNRKLKEWAPGCEVVFIDGITEGAACTVLKARDLIDSNNPLMIVNSDQYIDFDVDDYLCASEHVDGLIMTMIACDPKWSYVALDEKELVKRVAEKQVISHQATVGVYNFKSGKDFVSCADMMISLDDKSNGEFYVAPVYNYLISEGKRVGTYNIGMEGQGMFGLGIPEDLAFFQNHPEIQKKLCQNGLVRGVI
>NZ_CP039845.1|WP_160256016.1|279108_279822_+|hypothetical-protein
MMILAHRGMWKALEDKNSLAAISRAFSHGYGLETDVRDHQGDVVISHDPSPSDYGVKMKHASSPVEVEWVLRKAISHALIGDQAEWAKKPNLKIPLAINIKSDGIGSMIIKALENIDIGKFPWFAFDMSVPEMVSYIKLSIPVFTRHSDIEKFPVLYDQAHGVWLDSFSWPVWYDNKDIKEHLAYGKYVCVVSPELHGHSAEKVESVWRSIHDSGLFRHSRLMICTDWPEKCRQFMR

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Crispr_ID: NZ_CP039845_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_5

327189-328716

TypeI-F

I-F

Consensus_repeat	Method
TTTCTAAACCGCCTATGCGGCGGTGTGGCTG	PILER-CR
TTTCTAAACCGCCTATGCGGCGGTCTGG	CRISPRCasFinder
TTTCTAAACCGCCTATGCGGCGGT	CRT
TTTCTAAACCGCCTATGCGGCGGTGTGG	PILER-CR

25 spacers

cas1,cas3-cas2,cas3f,cas8f,cas5f,cas7f,cas6f

The CRISPR arrays of NZ_CP039845_5

>merge|NZ_CP039845|5|327189-328716|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
TTTCTAAACCGCCTATGCGGCGGTGTGACTGTGGCAGGCGCGGGGTCGCCGTGCTGTAGCTTTCTAAACCGCCTATGCGGCGGTGTGGCTGCTGAGGCGGTTAGAGAGAGAAGCCGGTGTTTTCTAAACCGCCTATGCGGCGGTGTGGGTAGTCCAAGACAATCCGTGCAGCCTGAATGCTTTCTAAACCGCCTATGCGGCGGTGTGGTAGTCGGCCTTCACCCCTTCCAATGATCCCTTTTTCTAAACCGCCTGTGCGGCGGTGTGGTGCCAGGACTTTGCAAAACCTAATCAGGCAAATTTCTAAACCGCCTGTGCGGCGGTGTGGCCTCCACTGGTGTTGTATTCCCGATCCGCGCACTTTCTAAACCGCCTGTGCGGCGGTGTGGAATTTTTTGAATCGGAATTAGCGTCCTCGTGTTTTCTAAACCGCCTGTGCGGCGGTCTGGTTGCGCAGGTAAATGCCAGCGTTCCCAATCATTTTCTAAACCGCCTATGCGGCGGTCTGGAATTTTTTTCAGTGCGGGAGCGAGCGCAGAGCTTTCTAAACCGCCTATGCGGCGGTGTGGTCGTAAGAGGCTTTTAGAAGAGGCGCAGGACTTTTCTAAACCGCCTATGCGGCGGTGTGGACAGAAAAAAGATAAATCCGAACGGGTAACAATTTCTAAACCGCCTATGCGGCGGTGTGGCTGGCGGAAGCGGCGGTCTCTGTGTTCGCTGTTTTCTAAACCGCCTATGCGGCGGTGTGGAGAAAAATGAGCGGATCAGAGGGCGAAGCCCTTTCTAAACCGCCTATGCGGCGGTGTGGGATACCCCGTTCGGTCTTGGCAATCAGGTTCCTTTCTAAACCGCCTATGCGGCGGTGTGGCGCAAGGGGGTTCGTCCAGGCACATGGACGAGTTTCTAAACCGCCTATGCGGCGGTCTGGCGAGAACGCTAGACACAAAACCCGCGCAATCTTTTCTAAACCGCCTATGCGGCGGTCTGGGCGTTTCTGGCGGTACACAAGACAGTCAGACCTTTCTAAACCGCCTATGCGGCGGTCTGGCGACAAGCCCAGTGACGGGAATTGTGACAAGATTTCTAAACCGCCTATGCGGCGGTCTGGGTGTCGGAATACAAGCCAGCTTGCATAAACTATTTCTAAACCGCCTATGCGGCGGTCTGGAAAATGGGCGCAGCGTCAGAGCGTTTGGAGCTTTTCTAAACCGCCTATGCGGCGGTCTGGCAAGAAGCGCAGAACCCGGCGGCCCGGCTCCGTTTCTAAACCGCCTATGCGGCGGTCTGGATGAAATTCAGCAATTTTCTTCCGAAAATCTGTTTCTAAACCGCCTATGCGGCGGTCTGGCCAAAAATCGCAGAAAATCAAGGCATTGAGGCTTTCTAAACCGCCTATGCGGCGGTCTGGACTGCGCTCTGTCCGTTTGGATTTTTGACAGATTTCTAAACCGCCTATGCGGCGGTCTGGCTGAGTGTTGGTGTCGATCTTTACGCGCCAGCTTTCTAAACCGCCTATGCGGCGGTCTGG

>NZ_CP039845|5|2|327189-327336|PILER-CR
TTTCTAAACCGCCTATGCGGCGGTGTGACTG	TGGCAGGCGCGGGGTCGCCGTGCTGTAGC
TTTCTAAACCGCCTATGCGGCGGTGTGGCTG	CTGAGGCGGTTAGAGAGAGAAGCCGGTGT
TTTCTAAACCGCCTATGCGGCGGTGTGGGTAGTCCAAGACAATCCGTGCAGCCTGAATGCTTTCTAAACCGCCTATGCGGCGGTGTGGTAGTCGGCCTTCACCCCTTCCAATGATCCCTTTTTCTAAACCGCCTGTGCGGCGGTGTGG	TGCCAGGACTTTGCAAAACCTAATCAGGCAAA
TTTCTAAACCGCCTGTGCGGCGGTGTGG	CCTCCACTGGTGTTGTATTCCCGATCCGCGCAC
TTTCTAAACCGCCTGTGCGGCGGTGTGG	AATTTTTTGAATCGGAATTAGCGTCCTCGTGT
TTTCTAAACCGCCTGTGCGGCGGTCTGG	TTGCGCAGGTAAATGCCAGCGTTCCCAATCAT
TTTCTAAACCGCCTATGCGGCGGTCTGG	AATTTTTTTCAGTGCGGGAGCGAGCGCAGAGC
TTTCTAAACCGCCTATGCGGCGGTGTGG	TCGTAAGAGGCTTTTAGAAGAGGCGCAGGACT
TTTCTAAACCGCCTATGCGGCGGTGTGG	ACAGAAAAAAGATAAATCCGAACGGGTAACAA
TTTCTAAACCGCCTATGCGGCGGTGTGG	CTGGCGGAAGCGGCGGTCTCTGTGTTCGCTGT
TTTCTAAACCGCCTATGCGGCGGTGTGG	AGAAAAATGAGCGGATCAGAGGGCGAAGCCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	GATACCCCGTTCGGTCTTGGCAATCAGGTTCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	CGCAAGGGGGTTCGTCCAGGCACATGGACGAG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGAGAACGCTAGACACAAAACCCGCGCAATCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	GCGTTTCTGGCGGTACACAAGACAGTCAGACC
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGACAAGCCCAGTGACGGGAATTGTGACAAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	GTGTCGGAATACAAGCCAGCTTGCATAAACTA
TTTCTAAACCGCCTATGCGGCGGTCTGG	AAAATGGGCGCAGCGTCAGAGCGTTTGGAGCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	CAAGAAGCGCAGAACCCGGCGGCCCGGCTCCG
TTTCTAAACCGCCTATGCGGCGGTCTGG	ATGAAATTCAGCAATTTTCTTCCGAAAATCTG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CCAAAAATCGCAGAAAATCAAGGCATTGAGGC
TTTCTAAACCGCCTATGCGGCGGTCTGG	ACTGCGCTCTGTCCGTTTGGATTTTTGACAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	CTGAGTGTTGGTGTCGATCTTTACGCGCCAGC


>NZ_CP039845|5|5|327189-328716|CRISPRCasFinder
TTTCTAAACCGCCTATGCGGCGGTGTGA	CTGTGGCAGGCGCGGGGTCGCCGTGCTGTAGC
TTTCTAAACCGCCTATGCGGCGGTGTGG	CTGCTGAGGCGGTTAGAGAGAGAAGCCGGTGT
TTTCTAAACCGCCTATGCGGCGGTGTGG	GTAGTCCAAGACAATCCGTGCAGCCTGAATGC
TTTCTAAACCGCCTATGCGGCGGTGTGG	TAGTCGGCCTTCACCCCTTCCAATGATCCCTT
TTTCTAAACCGCCTGTGCGGCGGTGTGG	TGCCAGGACTTTGCAAAACCTAATCAGGCAAA
TTTCTAAACCGCCTGTGCGGCGGTGTGG	CCTCCACTGGTGTTGTATTCCCGATCCGCGCAC
TTTCTAAACCGCCTGTGCGGCGGTGTGG	AATTTTTTGAATCGGAATTAGCGTCCTCGTGT
TTTCTAAACCGCCTGTGCGGCGGTCTGG	TTGCGCAGGTAAATGCCAGCGTTCCCAATCAT
TTTCTAAACCGCCTATGCGGCGGTCTGG	AATTTTTTTCAGTGCGGGAGCGAGCGCAGAGC
TTTCTAAACCGCCTATGCGGCGGTGTGG	TCGTAAGAGGCTTTTAGAAGAGGCGCAGGACT
TTTCTAAACCGCCTATGCGGCGGTGTGG	ACAGAAAAAAGATAAATCCGAACGGGTAACAA
TTTCTAAACCGCCTATGCGGCGGTGTGG	CTGGCGGAAGCGGCGGTCTCTGTGTTCGCTGT
TTTCTAAACCGCCTATGCGGCGGTGTGG	AGAAAAATGAGCGGATCAGAGGGCGAAGCCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	GATACCCCGTTCGGTCTTGGCAATCAGGTTCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	CGCAAGGGGGTTCGTCCAGGCACATGGACGAG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGAGAACGCTAGACACAAAACCCGCGCAATCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	GCGTTTCTGGCGGTACACAAGACAGTCAGACC
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGACAAGCCCAGTGACGGGAATTGTGACAAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	GTGTCGGAATACAAGCCAGCTTGCATAAACTA
TTTCTAAACCGCCTATGCGGCGGTCTGG	AAAATGGGCGCAGCGTCAGAGCGTTTGGAGCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	CAAGAAGCGCAGAACCCGGCGGCCCGGCTCCG
TTTCTAAACCGCCTATGCGGCGGTCTGG	ATGAAATTCAGCAATTTTCTTCCGAAAATCTG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CCAAAAATCGCAGAAAATCAAGGCATTGAGGC
TTTCTAAACCGCCTATGCGGCGGTCTGG	ACTGCGCTCTGTCCGTTTGGATTTTTGACAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	CTGAGTGTTGGTGTCGATCTTTACGCGCCAGC
TTTCTAAACCGCCTATGCGGCGGTCTGG

>NZ_CP039845|5|2|327189-328712|CRT
TTTCTAAACCGCCTATGCGGCGGT	GTGACTGTGGCAGGCGCGGGGTCGCCGTGCTGTAGC
TTTCTAAACCGCCTATGCGGCGGT	GTGGCTGCTGAGGCGGTTAGAGAGAGAAGCCGGTGT
TTTCTAAACCGCCTATGCGGCGGT	GTGGGTAGTCCAAGACAATCCGTGCAGCCTGAATGC
TTTCTAAACCGCCTATGCGGCGGT	GTGGTAGTCGGCCTTCACCCCTTCCAATGATCCCTT
TTTCTAAACCGCCTGTGCGGCGGT	GTGGTGCCAGGACTTTGCAAAACCTAATCAGGCAAA
TTTCTAAACCGCCTGTGCGGCGGT	GTGGCCTCCACTGGTGTTGTATTCCCGATCCGCGCAC
TTTCTAAACCGCCTGTGCGGCGGT	GTGGAATTTTTTGAATCGGAATTAGCGTCCTCGTGT
TTTCTAAACCGCCTGTGCGGCGGT	CTGGTTGCGCAGGTAAATGCCAGCGTTCCCAATCAT
TTTCTAAACCGCCTATGCGGCGGT	CTGGAATTTTTTTCAGTGCGGGAGCGAGCGCAGAGC
TTTCTAAACCGCCTATGCGGCGGT	GTGGTCGTAAGAGGCTTTTAGAAGAGGCGCAGGACT
TTTCTAAACCGCCTATGCGGCGGT	GTGGACAGAAAAAAGATAAATCCGAACGGGTAACAA
TTTCTAAACCGCCTATGCGGCGGT	GTGGCTGGCGGAAGCGGCGGTCTCTGTGTTCGCTGT
TTTCTAAACCGCCTATGCGGCGGT	GTGGAGAAAAATGAGCGGATCAGAGGGCGAAGCCC
TTTCTAAACCGCCTATGCGGCGGT	GTGGGATACCCCGTTCGGTCTTGGCAATCAGGTTCC
TTTCTAAACCGCCTATGCGGCGGT	GTGGCGCAAGGGGGTTCGTCCAGGCACATGGACGAG
TTTCTAAACCGCCTATGCGGCGGT	CTGGCGAGAACGCTAGACACAAAACCCGCGCAATCT
TTTCTAAACCGCCTATGCGGCGGT	CTGGGCGTTTCTGGCGGTACACAAGACAGTCAGACC
TTTCTAAACCGCCTATGCGGCGGT	CTGGCGACAAGCCCAGTGACGGGAATTGTGACAAGA
TTTCTAAACCGCCTATGCGGCGGT	CTGGGTGTCGGAATACAAGCCAGCTTGCATAAACTA
TTTCTAAACCGCCTATGCGGCGGT	CTGGAAAATGGGCGCAGCGTCAGAGCGTTTGGAGCT
TTTCTAAACCGCCTATGCGGCGGT	CTGGCAAGAAGCGCAGAACCCGGCGGCCCGGCTCCG
TTTCTAAACCGCCTATGCGGCGGT	CTGGATGAAATTCAGCAATTTTCTTCCGAAAATCTG
TTTCTAAACCGCCTATGCGGCGGT	CTGGCCAAAAATCGCAGAAAATCAAGGCATTGAGGC
TTTCTAAACCGCCTATGCGGCGGT	CTGGACTGCGCTCTGTCCGTTTGGATTTTTGACAGA
TTTCTAAACCGCCTATGCGGCGGT	CTGGCTGAGTGTTGGTGTCGATCTTTACGCGCCAGC
TTTCTAAACCGCCTATGCGGCGGT

>NZ_CP039845|5|3|327429-328716|PILER-CR
	TGGCAGGCGCGGGGTCGCCGTGCTGTAGC
TTTCTAAACCGCCTATGCGGCGGTGTGGCTG	CTGAGGCGGTTAGAGAGAGAAGCCGGTGT
TTTCTAAACCGCCTATGCGGCGGTGTGGGTAGTCCAAGACAATCCGTGCAGCCTGAATGCTTTCTAAACCGCCTATGCGGCGGTGTGGTAGTCGGCCTTCACCCCTTCCAATGATCCCTTTTTCTAAACCGCCTGTGCGGCGGTGTGG	TGCCAGGACTTTGCAAAACCTAATCAGGCAAA
TTTCTAAACCGCCTGTGCGGCGGTGTGG	CCTCCACTGGTGTTGTATTCCCGATCCGCGCAC
TTTCTAAACCGCCTGTGCGGCGGTGTGG	AATTTTTTGAATCGGAATTAGCGTCCTCGTGT
TTTCTAAACCGCCTGTGCGGCGGTCTGG	TTGCGCAGGTAAATGCCAGCGTTCCCAATCAT
TTTCTAAACCGCCTATGCGGCGGTCTGG	AATTTTTTTCAGTGCGGGAGCGAGCGCAGAGC
TTTCTAAACCGCCTATGCGGCGGTGTGG	TCGTAAGAGGCTTTTAGAAGAGGCGCAGGACT
TTTCTAAACCGCCTATGCGGCGGTGTGG	ACAGAAAAAAGATAAATCCGAACGGGTAACAA
TTTCTAAACCGCCTATGCGGCGGTGTGG	CTGGCGGAAGCGGCGGTCTCTGTGTTCGCTGT
TTTCTAAACCGCCTATGCGGCGGTGTGG	AGAAAAATGAGCGGATCAGAGGGCGAAGCCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	GATACCCCGTTCGGTCTTGGCAATCAGGTTCC
TTTCTAAACCGCCTATGCGGCGGTGTGG	CGCAAGGGGGTTCGTCCAGGCACATGGACGAG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGAGAACGCTAGACACAAAACCCGCGCAATCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	GCGTTTCTGGCGGTACACAAGACAGTCAGACC
TTTCTAAACCGCCTATGCGGCGGTCTGG	CGACAAGCCCAGTGACGGGAATTGTGACAAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	GTGTCGGAATACAAGCCAGCTTGCATAAACTA
TTTCTAAACCGCCTATGCGGCGGTCTGG	AAAATGGGCGCAGCGTCAGAGCGTTTGGAGCT
TTTCTAAACCGCCTATGCGGCGGTCTGG	CAAGAAGCGCAGAACCCGGCGGCCCGGCTCCG
TTTCTAAACCGCCTATGCGGCGGTCTGG	ATGAAATTCAGCAATTTTCTTCCGAAAATCTG
TTTCTAAACCGCCTATGCGGCGGTCTGG	CCAAAAATCGCAGAAAATCAAGGCATTGAGGC
TTTCTAAACCGCCTATGCGGCGGTCTGG	ACTGCGCTCTGTCCGTTTGGATTTTTGACAGA
TTTCTAAACCGCCTATGCGGCGGTCTGG	CTGAGTGTTGGTGTCGATCTTTACGCGCCAGC
TTTCTAAACCGCCTATGCGGCGGTCTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_096884248.1\|332139_333350_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP039845.1\|WP_160256043.1\|335887_336853_+\|type-I-F-CRISPR-associated-protein-Csy2	cas5f	cd09736_cas5f_CAS-I-F	gnl\|CDD\|378221
NZ_CP039845.1\|WP_160256036.1\|322719_323436_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|376885
NZ_CP039845.1\|WP_124297860.1\|317982_319029_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256040.1\|329890_332143_+\|type-I-F-CRISPR-associated-helicase-Cas3	cas3-cas2	cas3-cas2-CAS-I-F	gnl\|CDD\|274201
NZ_CP039845.1\|WP_160256146.1\|336937_337954_+\|type-I-F-CRISPR-associated-protein-Csy3	cas7f	pfam09615_cas7f_CAS-I-F	gnl\|CDD\|378222
NZ_CP039845.1\|WP_160256035.1\|319342_320668_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_099541347.1\|324178_324385_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256042.1\|334601_335891_+\|type-I-F-CRISPR-associated-protein-Csy1	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
NZ_CP039845.1\|WP_160256046.1\|339954_340152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256037.1\|324421_325327_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215633
NZ_CP039845.1\|WP_160256034.1\|317278_317737_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124297864.1\|323676_324126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124297862.1\|321334_322231_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_CP039845.1\|WP_160256041.1\|333490_334582_+\|hypothetical-protein	cas3f	cd09673_cas3f_CAS-I-F	gnl\|CDD\|187804
NZ_CP039845.1\|WP_160256044.1\|337953_338532_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	cas6f	pfam09618_cas6f_CAS-I-F	gnl\|CDD\|378224
NZ_CP039845.1\|WP_160256038.1\|325575_326997_+\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|184255
NZ_CP039845.1\|WP_160256045.1\|338829_339756_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256039.1\|328913_329894_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	cas1	cd09718_cas1_CAS-I-F	gnl\|CDD\|187849
NZ_CP039845.1\|WP_124296677.1\|320669_321338_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_096884248.1\|332139_333350_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.81526e-111
NZ_CP039845.1\|WP_160256036.1\|322719_323436_+\|Fic-family-protein	gnl\|CDD\|376885	pfam02661, Fic, Fic/DOC family. This family consists of the Fic (filamentation induced by cAMP) protein and doc (death on curing). The Fic protein is involved in cell division and is suggested to be involved in the synthesis of PAB or folate, indicating that the Fic protein and cAMP are involved in a regulatory mechanism of cell division via folate metabolism. This family contains a central conserved motif HPFXXGNG in most members. The exact molecular function of these proteins is uncertain. P1 lysogens of Escherichia coli carry the prophage as a stable low copy number plasmid. The frequency with which viable cells cured of prophage are produced is about 10(-5) per cell per generation. A significant part of this remarkable stability can be attributed to a plasmid-encoded mechanism that causes death of cells that have lost P1. In other words, the lysogenic cells appear to be addicted to the presence of the prophage. The plasmid withdrawal response depends on a gene named doc (death on curing) that is represented by this family. Doc induces a reversible growth arrest of E. coli cells by targetting the protein synthesis machinery. Doc hosts the C-terminal domain of its antitoxin partner Phd (prevents host death) through fold complementation, a domain that is intrinsically disordered in solution but that folds into an alpha-helix on binding to Doc.This domain forms complexes with Phd antitoxins containing pfam02604.	6.65764e-14
NZ_CP039845.1\|WP_160256146.1\|336937_337954_+\|type-I-F-CRISPR-associated-protein-Csy3	gnl\|CDD\|378222	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2463 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy3, for CRISPR/Cas Subtype Ypest protein 3.	1.28249e-166
NZ_CP039845.1\|WP_160256040.1\|329890_332143_+\|type-I-F-CRISPR-associated-helicase-Cas3	gnl\|CDD\|274201	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST. The helicase in many CRISPR-associated (cas) gene clusters is designated Cas3, and most Cas3 proteins are described by model TIGR01587. Members of this family are considerably larger, show a number of motifs in common with TIGR01587 sequences, and replace Cas3 in some CRISPR/cas loci in a number of Proteobacteria, including Yersinia pestis, Chromobacterium violaceum, Erwinia carotovora subsp. atroseptica SCRI1043, Photorhabdus luminescens subsp. laumondii TTO1, Legionella pneumophila, etc.	0
NZ_CP039845.1\|WP_160256037.1\|324421_325327_-\|hypothetical-protein	gnl\|CDD\|215633	PLN03210, PLN03210, Resistant to P. syringae 6; Provisional.	0.000299299
NZ_CP039845.1\|WP_160256042.1\|334601_335891_+\|type-I-F-CRISPR-associated-protein-Csy1	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	3.7315e-104
NZ_CP039845.1\|WP_160256041.1\|333490_334582_+\|hypothetical-protein	gnl\|CDD\|187804	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas3/Cas2 fusion; This protein includes both DEAH and HD motifs for helicase and N-terminal domain corresponding to Cas2 RNAse; signature gene for Type I and subtype I-F.	2.36149e-65
NZ_CP039845.1\|WP_124297862.1\|321334_322231_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.04689e-15
NZ_CP039845.1\|WP_160256044.1\|337953_338532_+\|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4	gnl\|CDD\|378224	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2462 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy4, for CRISPR/Cas Subtype Ypest protein 4.	7.95442e-71
NZ_CP039845.1\|WP_160256038.1\|325575_326997_+\|restriction-endonuclease	gnl\|CDD\|184255	PRK13699, PRK13699, putative methylase; Provisional.	2.31208e-07
NZ_CP039845.1\|WP_160256039.1\|328913_329894_+\|type-I-F-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187849	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.57899e-171
NZ_CP039845.1\|WP_160256043.1\|335887_336853_+\|type-I-F-CRISPR-associated-protein-Csy2	gnl\|CDD\|378221	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.	7.76639e-139

>NZ_CP039845.1|WP_160256038.1|325575_326997_+|restriction-endonuclease
MINVESRLRAEHLIADIEGQYQSVTEVNRDLNRLLVSFQANKKKPIYRWFKYKEGFSKPFLDYVFEHSNIKTGGVVLDPFAGSGSTCFAANERGLYSIGVELLPVGCHFIRVRELLHRVGMNTVQEWLHDIYDKKPWQIPTEINKTFSHLNITRGAFPLNSEKELMNYLFWSDSLPHDMRVFCKFVAFGILEDISYTRKDGQFLRWDYRAQKGSRKSSFSKGNIPTFSDALLDKCRIIESDLSSLAHDQILTSIDSRHNKIKSPLTLYEGSNFFHLNNIRKRSIDLVVTSPPYCNRYDYTRTYALELAYLNLTDMQIKEMRQSLLSCTVENRPKDFQNIIDPMSLEKIRKLVSESKALTAILNFLRAEKEEHRLNNNAVIGMIECYFFEMAVHIYQLALVMKRHGKVYMVNDNVRYNGITIPVDCILSSMAEKLGFKCLKIWVLPVGKGNSSQQMKAHGRSETRKCVYLWERQ
>NZ_CP039845.1|WP_160256037.1|324421_325327_-|hypothetical-protein
MTRLAEGSERQFVLNEDLVAGMEHKGRLDLSKSYLLTETPENMRVSGALVMKDCVGLQKMGSGLRVKGDIILDGCTGLREYPENAKVGGKVHLQGCTGLTKIPSNTKFKSLSVALCSALNELPTMDIKGDLFATQCYVLNKIGPGSKIGGDLYLFDCVSLRELPNDLEFSGALNIGGCRWLNAIPDNIRHIKSLEATQCKSLSKLPDSFTVDGFCNLSDCDSLEILPSEMFVGGSLSLQGCSNLKELPRDLKVNNTISLLRCNGIRIPQEVIDNHPDQIYFPAEYEVIPPAAENTAKPSCG
>NZ_CP039845.1|WP_099541347.1|324178_324385_-|hypothetical-protein
MSDFPDKWKGSLLLAADSIDKLRASDVERVLLDVPENDREELGRDISRCRPDLSDEIADILEESCPSP
>NZ_CP039845.1|WP_124297864.1|323676_324126_+|hypothetical-protein
MSLAKIDFLRLARCNPNLAGEIALKHMPSKILSRFRLCSHSNNPSFREVSTKESGTETAEMRLVSRISYMMKHLNPDDPIEIDPLIIQLSNGWRIAYLCDLDPDVMIVIPHATTLFPNDNDKSERIFYTILRNSDAKRPQGWEHLIIEA
>NZ_CP039845.1|WP_160256036.1|322719_323436_+|Fic-family-protein
MEAWLSNRMEGVHLSLAEAFSYANTKYDLQDNDKSDFLGTFRLILDDNDGMPKANFRSFENRLLNIHAKVFSRRTKKEPGRYKSRPNMAGEYVFVSPQAVRETLRIGYEIGVSLTSPFSRAIYLSFLITEVHPFMDGNGRVSRLIMNDQLSSCGEARIVIPQNLWGWYKLGLKELSCGNGGPERLATTFQLSQIWANAIRWDELRACEDALDEARLSLTSDERLDSWFAKYIPLHTDT
>NZ_CP039845.1|WP_124297862.1|321334_322231_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MAKSVMSANDAFNYRQTLHVATLEALTTSRRWKPKDLIFQGGTSLHLAHGSPRFSEDLDFMVDENLNLNSIANSVKSRLIVSSAFPPDLELKISKIRTNKNPLSFVVNLGRSDVMGSVHVKVEMWRTPSRALQEINAFVAPVRIVNGPAAGMSAQVVSSGLEEIYADKVFAVAARTHLKARDIFDLYWIRRQGCAADLTQENLQTRLEIYPEADPEEWLENARERFDNMHTDASAIHKDLKRWLPHYWPLNEQTVGDMIVESKLALEEGMEIMQKIAHERRHELGQEHEAYPDTGYEP
>NZ_CP039845.1|WP_124296677.1|320669_321338_-|hypothetical-protein
MTTTSSPTNKRRKNVSAIERLRTLPELFRGADTTVRFGWDTRQASQYLHAWKKRGLISALGGHSDVYANTMLYPRVDWSRGAMMAMPSAVCIGVEPLRLAGWATQIQQKPDIGVHQRQPYYKTDHFNVIPLPAEWRKKISDGLHEVKERGSMPVLRPAWALVDMIKREGWEGCGLDPDDIDWEYLNASDWADLQVACATLDLDMEQHITAHYEPDFSYSSSP
>NZ_CP039845.1|WP_160256035.1|319342_320668_+|hypothetical-protein
MMYFDDPFFIKTIDDFRQRTSNFTSEMKAIQFEQEVAPLLDQRFNHITRFVPEFVTGRHIINNPIGASDSLRPFNAFSLGNWLILAEIARVPTIPSRIISVVPTNSIISRYGNSISPEHKSAQDKLDKALEALKDDEILRYDSASAACLKAMMQAGEDDITLRRGVCVKPGGGMMPLIYHPHMIKHDERVAEATMTYCQEETPVWARTWIPAMRIEKKDGNTSPVEWRIYVMNGRIEGASLYYPHAPITIEQARTTYSLNACIEMARKILATMRGHRLFPHVPKYVYHEHKIDLRDIHCTLDFLVTESGDPVFLEGGPAHLRQPDLGAHPCNFAMFPPRGVALGEGAIAYEPPDLSELPLAPILPPREWVFRQQPSAFGLRCPNHPDAEAQWSEYRSHIWCEDCQKDIPMDDPTFRTHPNTDLSALNMFTGETRKPFTMRV
>NZ_CP039845.1|WP_124297860.1|317982_319029_+|hypothetical-protein
MSTSVKAPAKAKRKPRHIVPQACLASLNEPPRSALRWEEGSTNEATGVREFQAFASINGGEERQVAIISAEPRGKDRFFYRCEKILCFEEFDSDKMRVRSSFGIYGFNMADLDTQIGRSVKNVEIMAGNPMYVGRSVSPQSLEHLSRGPWGKIQNARALRFDQHGRPDIVTVSTAGHGGYILSEDATKEMPSPLRSGRCYEEDCGWSRVALSFPELFTPLELYTAQRTLANYEPDVWEKYFGQELAPGMSQEKDNRTFLAKHADDYLVVSAITSKDYPDFVEVTAVRGKMTGEMNRHHEAKHFYVPSEEYSAKSRREPYFVIDLDRHSEEPPCLEVKNELTEDEAPSP
>NZ_CP039845.1|WP_160256034.1|317278_317737_+|hypothetical-protein
MGLDIYLISPDQENLSKSDQGGIFIREGGQTKQISRSEWDIRYPGVEPTVFIEGKDRGEVFSTSLTHNLGLMAREAGLYGVMWHPEENGIITASDIIPHLEKGLITLVIEKERMKPYNPSNGWGSYDLLFSVTQEYLRAAHKFPEAKVEVCR
>NZ_CP039845.1|WP_160256039.1|328913_329894_+|type-I-F-CRISPR-associated-endonuclease-Cas1
MDEISPSSLKTIMYSKRANIYYLEYCRLLVNGGRVEYVTDAGKKRLYWNVPIANTTTLLLGPGTSITQAAVRELGKAGVMIGFSAGGGTPLFAGTSGVADFYWVSAQSEYRPTEYVQAWMSFWFDDSRRLKAAKAFQIMRSEKIAMTWRSPRFQKNGFKPDFEALDCLLRESQSAIQGAPDTQALLTEEARITKALFRMAASAVSYGKFTRSRNGEASDPANRFLDHGNYLAYGLGATSLWVLGIPHGFAVLHGKTRRGGLVFDVADLVKDAMVMPQAFISAMRGDDQTAFRAACTDVLVGGNALDFMIDVIKDVSMDMKVKHQVP
>NZ_CP039845.1|WP_160256040.1|329890_332143_+|type-I-F-CRISPR-associated-helicase-Cas3
MNVLLISQCDKRALSETRRILDQFAQRKGARTWQTRITEQGLETLRDLLRRKARRNTAIACHNLTGASGADVLWFVGDRSRFDEAGNVPTNSTVRDILRADDETTWRSRGIVLLLAQMAALFHDLGKGSEEFQEKLRSHIPKRSPYRHEWVSVRMFSAFVGDADNDRIWLERLADSQSHAGRWTDLDLLVRDGVDNGSGRSMPFQNLPPLAAAVAWLVVSHHRMPLVPVMKDGKQEWLGKESPSFPLDILTKPLSEITAQWNSQSYDDDNPEDIQSCWRMAGKSEAHPVRDKKWSVYARRLALKAIEMLDRDSSAFGSDASLSQDPYVLHLARLSLMLADHHHSSLPSTGKVAKASKDILFANTDSKGRLKEPLTDHLLGVARAAGQVAYALQSVKQLLPSIKRHRALLRRSPHDQFRWQDAAVDEARAVRDRSEKGGAFIVSMASTGCGKTLANGKIMNALSNEHDGFRLTYALGLRSLTLQTGEAYRRDIGISSNDIAILVGGLASRTLFEHYADQAAASGSESMQSIMDEGYVVEGGVEGSHPVTRRLVGDKKSEKLLATPVVVCTVDHIAPATESLRGGRHIVPSFRLMTSDIVLDELDDYDLNDMPALTRMVHLAGLLGARVLLSSATLPPAMVEGMYEAYRTGRRCYDENHGRCGDEWPGVTCLWVDEFSCTSDTPSDVATFREKHREFIAARASELAQQPALRVAETVPVVIPEGSGRHDVLDGYAKTIMNCPGFCGDVFYLI
>NZ_CP039845.1|WP_096884248.1|332139_333350_-|IS3-family-transposase
MSNKSKRFPPEFRDRAARMVLEEEKNHPSRWSAVMMIAPKLDIHPDTLSKWTRLHERANAPAVSDLPDREKIRQLERENRELRQANEILRKASAYFCPGGARPHLQAMTRFIEEHRQTYGVGSICRVLSIAPSAYYATVARQKNPCVRSQKDKELCDDIRRVWNNNFCVYGARKVWHQLRREGVDVARCTVERLMRRMGLKGVIRGKGVRTTRPDPQRPCPQDLVQRQFHAPAPNRLWVSDFTYVSTWQGFVYVAFIIDVFARVIVGWRVSSTAHTDFVLDALEQALCQRQPEGKVTHHSDRGCQYVSIRYTQRLAEAGLVASVGSVGDSYDNALAETINGLYKTELIYRQGPWKNREAVELATLKWVDWFNNRRLLSSIGNIPPAEAEARFYAQQKSHALAA
>NZ_CP039845.1|WP_160256041.1|333490_334582_+|hypothetical-protein
MANIEPIFDVAQILFRAEEVPGMRVHICVYHARFPLAHRAAIENMLDRSFTRKSPDAAFSEPEIRRAIDADPDKDHVFVVLASPVCEVGRDWDADWAVVEPSSVRSIIQLAGRIQRHRRQIPIDANMAILDMPIRALLKPTEAAFCRPGYEGRSGDFRLATHHACDLLESGFVKHIDARPRIDPPPRSEWHTTTSLADLEQAALVRNMLPDELRQAVSSGSRRQRFLTASAFRPANFMSYLVWKFPQSLMTGVLPQQQPFRASSGKEVTLVLMPDEDGIPRLYREDGKIGERLYVLVEKSLRHDVSLDTPYSWSPTKQYGIDYKVTSGLVSPTTAALMSVRVPNSDFGWRYHPNLGFAVYRGE
>NZ_CP039845.1|WP_160256042.1|334601_335891_+|type-I-F-CRISPR-associated-protein-Csy1
MNVSSQSERTAIFRKAIANFIKERRETKKVAEGDPRYEYQTWVEKASEDAQAIQFATHVARITHSSSQCDSFYAPPDTLPHCDVVARNAMGPSFHEDASAQNAAALYVIAFLNLRVDGQRLLDYVLSNDPALRDALAPSSAKGDEMMVKFASVVSPSKAPRVDALMKQVFWLNGDDPVEDKDFILLAPLACSSLMHELYMSVQSANFSEESKEARKARREGKPSEHPSISYHDVVEWHVGGANPQNVSPLNSSRRGVSYLLSTLPPKWVGRSVPDLRGRDSAIPTFVRSRRAYHIIKELAGFLKTNPPPTIETRKQRTIYEDDLCQALAEFTESVRSYEKPGWTLASDCRLPLGEKAWLDPGAFDDSSDTARPDRWEDDVSTRIANALNAALSKYGVVGLGDTEFAHWCRILLQESSWQTSSLAQGGMA
>NZ_CP039845.1|WP_160256043.1|335887_336853_+|type-I-F-CRISPR-associated-protein-Csy2
MSKAPSFTHGLVLPRLRVQNANAISSPMTHGFPSITAFMGFMWAIGRKLCQAGIEDVFFESVGVVCHDYQEMVGGSGFRKVFGLTRNPLTKNGSTAPIIEEGRIHLDISLVFGVTCQRWRTGSTETFKKDLETIRDIVAQMRCAGGSIMAPRGSHAISPMPWIFDAPVDEDDHVYQRLRYRLMPGFALIDRQDVLTSRLERLRTTSPDATLMDAWLSVCRSEWKWMPDKHDGDPEKGEWKSEKSPGWLVPITVGYAGLVPVSPAGTVEGARQSDVPFQFAEALYSIGEWIGPHRLSSPSSLLWHVENDPEKGLYRCRNNAA
>NZ_CP039845.1|WP_160256146.1|336937_337954_+|type-I-F-CRISPR-associated-protein-Csy3
MPKSAIANPSVLAFERKIDPSDAIFTSGNGDPIVLREKAVRGTISNRIKKQKDADPAKLDAAIESPNLQTVDVATLPVDGEGADTLVVTFTVRVIGNVGIPCACNEPTYRDRVQSVVADYIARDGFRTLGLRYAENIANARALWRNRLSAQDIETTVRLLKDGKGVKSWSFDSFSLRLNEAGVSDNKDIIDLGTVIADALAGKSLALLEVVSKARMAPGLEVFPSQELIMDRTRNSKSRTLYAVETKSGPVAALHSQKVGNALRTVDTWYPDSDGMPIAAEMYGSVTTMSKAFRQPRLKRDFYNLLDGWMLKDKVPSEGDQHYVMACIIRGGVFGSAD
>NZ_CP039845.1|WP_160256044.1|337953_338532_+|type-I-F-CRISPR-associated-endoribonuclease-Cas6/Csy4
MGHSMLSHFIQVRCLSPDQEITVQDIMSRVFYRLHGAIASLHTSDVGVSFPNHTFMSVGDVLRVHGSKDALTRLLDGGWLFRLEDYTLSSGIMSVPEQVKYRCVSRARAKSSAPRLRRRLMRRHNLSELEAKRLIPDSIEKRLNLPSILVCSKTTSTPSYPIFIKHGPLLSSPVPGPFSGYGLSSEATVPWF
>NZ_CP039845.1|WP_160256045.1|338829_339756_-|hypothetical-protein
MKSTLKLLLTPKRKLQKDAELCINSFFEKLLIDPFTLSQRYSPSELCLQNEFERIQNIVSSDERPLIEHPALPLLRILFKKLPPYMAVIDIRSIGSVSGSRDPFTNDLDALPQTVNHNALYDPEIGCLDYKGIRKLRREVYNSFFHTTKTERIFTITEREWDGHRTAHNSDGSHRFSYWRQLALIPTVPYRIRARIVPFSLNEKAFLSLISSWRIVAVTRSGEGVKDAMDMATFWPEGFCPITRDRYNNSSQDYWIVPQPHMAPLEYRDPLITVHQKLDELRPFEPLRVIAEQRVMPTASKPWRKDRL
>NZ_CP039845.1|WP_160256046.1|339954_340152_-|hypothetical-protein
MKQHREHKITKSAVLIELNGEAVILKISAQGWNEILAIAAREAKGELCVAKVPNQNIFDLISTQA

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Crispr_ID: NZ_CP039845_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039845_6

412583-412696

TypeI-F

Consensus_repeat	Method
CTCAAGGCCTTTGTACTATCAACACTATCGAAAACGGCG	CRISPRCasFinder

1 spacers

cas8f

The CRISPR arrays of NZ_CP039845_6

>merge|NZ_CP039845|6|412583-412696|CRISPRCasFinder
CTCAAGGCCTTTGTACTATCAACACTATCGAAAACGGCGTTATCAAATTGGTCTAATAATGAAGACCTAAGGTCTCTCAAGGCCTCTGTACTATCAACACTATCGAAAACGGCG

>NZ_CP039845|6|6|412583-412696|CRISPRCasFinder
CTCAAGGCCTTTGTACTATCAACACTATCGAAAACGGCG	TTATCAAATTGGTCTAATAATGAAGACCTAAGGTCT
CTCAAGGCCTCTGTACTATCAACACTATCGAAAACGGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039845.1\|WP_160256086.1\|399817_400636_-\|hypothetical-protein	cas8f	pfam09611_cas8f_CAS-I-F	gnl\|CDD\|378220
NZ_CP039845.1\|WP_160256101.1\|419078_419507_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256097.1\|415263_415995_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256100.1\|418854_419040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256098.1\|416451_418167_+\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|378996
NZ_CP039845.1\|WP_160256096.1\|414201_414603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124297920.1\|411048_411522_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256095.1\|413496_414201_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256087.1\|400885_401662_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256092.1\|408406_409771_+\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|377920
NZ_CP039845.1\|WP_124296401.1\|401781_402282_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256089.1\|403670_404336_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237177
NZ_CP039845.1\|WP_160256093.1\|409815_410346_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277336
NZ_CP039845.1\|WP_160256102.1\|419526_420210_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_124297917.1\|412788_413337_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256090.1\|404419_407509_-\|DotA/TraY-family-protein	unknown	unknown	gnl\|CDD\|275142
NZ_CP039845.1\|WP_124297914.1\|414688_415258_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039845.1\|WP_160256091.1\|408083_408407_+\|XRE-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|213767
NZ_CP039845.1\|WP_160256099.1\|418206_418836_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366302
NZ_CP039845.1\|WP_160256088.1\|403269_403530_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP039845.1\|WP_160256086.1\|399817_400636_-\|hypothetical-protein	gnl\|CDD\|378220	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1). CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This entry, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) entry strictly associated with the Ypest subtype of CRISPR/Cas locus. It is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.	1.48655e-53
NZ_CP039845.1\|WP_160256089.1\|403670_404336_+\|hypothetical-protein	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0.00237302
NZ_CP039845.1\|WP_160256093.1\|409815_410346_-\|hypothetical-protein	gnl\|CDD\|277336	cd07390, MPP_AQ1575, Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	2.16958e-30
NZ_CP039845.1\|WP_160256098.1\|416451_418167_+\|N-6-DNA-methylase	gnl\|CDD\|378996	pfam12950, TaqI_C, TaqI-like C-terminal specificity domain. This domain is found at the C-terminus of the TaqI protein and is involved in DNA-binding and substrate recognition.	2.25511e-23
NZ_CP039845.1\|WP_160256090.1\|404419_407509_-\|DotA/TraY-family-protein	gnl\|CDD\|275142	TIGR04346, DotA_TraY, conjugal transfer/type IV secretion protein DotA/TraY. Members of this protein family include transfer protein TraY of IncI1 plasmid R64 and DotA (defect in organelle trafficking A) of Legionella pneumophila.	9.86416e-80
NZ_CP039845.1\|WP_160256091.1\|408083_408407_+\|XRE-family-transcriptional-regulator	gnl\|CDD\|213767	TIGR03070, couple_hipB, transcriptional regulator, y4mF family. Members of this family belong to a clade of helix-turn-helix DNA-binding proteins, among the larger family pfam01381 (HTH_3; Helix-turn-helix). Members are similar in sequence to the HipB protein of E. coli. Genes for members of the seed alignment for this protein family were found to be closely linked to genes encoding proteins related to HipA. The HibBA operon appears to have some features in common with toxin-antitoxin post-segregational killing systems. [Regulatory functions, DNA interactions].	0.00327886
NZ_CP039845.1\|WP_160256099.1\|418206_418836_+\|hypothetical-protein	gnl\|CDD\|366302	pfam00782, DSPc, Dual specificity phosphatase, catalytic domain. Ser/Thr and Tyr protein phosphatases. The enzyme's tertiary fold is highly similar to that of tyrosine-specific phosphatases, except for a "recognition" region.	3.8305e-06
NZ_CP039845.1\|WP_160256092.1\|408406_409771_+\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|377920	pfam07804, HipA_C, HipA-like C-terminal domain. The members of this family are similar to a region close to the C-terminus of the HipA protein expressed by various bacterial species. This protein is known to be involved in high-frequency persistence to the lethal effects of inhibition of either DNA or peptidoglycan synthesis. When expressed alone, it is toxic to bacterial cells, but it is usually tightly associated with HipB, and the HipA-HipB complex may be involved in autoregulation of the hip operon. The hip proteins may be involved in cell division control and may interact with cell division genes or their products.	5.983e-39

>NZ_CP039845.1|WP_124297920.1|411048_411522_+|hypothetical-protein
MSKTIIKTRKADENHQVVTFTLQDDNRNRQKRPCKTCPWRKDKVGIFPAEAFRHSAPTGYDIPELIASGEMPSTFACHKTGLKAPSTCAGFLLAESSNHNLSLRMAQMRGEDVLSGVQKGEAPLFDNYYDMAVANGVPPDDPRITPCWRPKKNNPDR
>NZ_CP039845.1|WP_160256093.1|409815_410346_-|hypothetical-protein
MRWLTSADHHYYHQAVITYSKRPFSSLDHMHEVFIRRWNSTVEDDDRVIYVGDLIFGNDISILKELRGHIIVNTGNHDKHSAMNKALRQGYVQSVQSYTGLYLAGQNYHFQHFPALDWPGKDKGAILVHGHMHNKYPPTEQSIDVGVDTPWANFAPIPIERIPSLIRKYGPKVSSS
>NZ_CP039845.1|WP_160256092.1|408406_409771_+|type-II-toxin-antitoxin-system-HipA-family-toxin
MINSPSRLRVFLGSTGKQIGTLNFTDLNGRQNSVFDYTQSWREDQDSFSISPSMPLKTGRFFANALNQSLALPLSICDSCPDSWGSKIIRNALRCGTVKRKINDFDILAAIDDFTRVGALRYMDDQGEFVSRSLFKSFQAPPPKLWLNRLAEAAKALERSEENKGDLDILLRHGASLGGARPKASVYDTAKGQLLIAKFTGAGETKPTERVEVLTLNLASRVKLNASKASLYCLSDKEPIALIERFDRTAKGNRRLYISAQTFMDAPQAADNCTYTEIADQLRHNASEPEQQLHELFGRVAFTILVSNSDDHLKNMGFLLTSPNKWELSPMFDVNPDPDRAEDQINLKTWISEESGPSASIEALIDAAEWFGLTREYAAEKVCAMAEVISSTWKLEAKAVGLNPSQIRDYHLAFENSETSYALKLGRPKVPGIDFNEEPKAHDKQEPDVPQPSF
>NZ_CP039845.1|WP_160256091.1|408083_408407_+|XRE-family-transcriptional-regulator
MKVLPPKSQRSLVKLGSDISVARRKRGFRLQDMSDATGFSIGALRRLEAGHPGSSIGMLCEVMRTLGEDNRLYNLIDISDDATGLALDVRKLPKRVRPCKGKFKDGF
>NZ_CP039845.1|WP_160256090.1|404419_407509_-|DotA/TraY-family-protein
MGSSQNHSRVKDFAERGKTEILKGLIVDDLVKGKGLGKFGLGPGVTKDIISAGNVASTAAQMIGKAFNYRPTIDYTLPDEETDPVVRFDMAAKHYELTKQKACRIQDAKYKNFWTLWCILICMLSLFASAYIQHRLSIHMTFMCVAVSCCILSQMFIASFYNWQIRSRRLGSLSEFASLPNEWLPVAIPKGAPKAEMEGFLPKFIANIIGVLKFILRKVRNWLPFIIAGWAALHPIMAMAADTGVAGTLLNPLPNTDIWGRVLGFLFPDIPPISDLSGARHTAISNGIQDGMGAMISDLCAISLLVISYQMVVGAAETAHQGELLGRKWHTMWSLPRVCYGYAALAPVVKGFCLLQVLIVYVIVVSGNMGNTIWSSFVDGLIQPEAITPVSANTDELALNAFKVETCFATYREMQKNNGVGEPDFPTKVQTESNIAYQAFHTIISGLSSLWSGNDTSTSGGATDSQVVTSWKFAPCGTISITSPANASDAAGTLAKAQINAFDTFLKSLEDPARYAYLATVSGSDGVGLDEAKNHISSVIQAKKTYDSALGTAATQFVQSVRGEDLSDFKNAVEQAGWISAGSYYMTIARINTMILDITKNIPTVSVDMENSIDSDKLYEKLNAKPNGPFIIADDMWNSIAYSSAQQVSSLDKGADAMNAMHGGAMYYLKQIGSPDSYGQSALLGLSLAGNADTYDTMQDTVIMGNYLVDLGEGALLGSVLGMDAIQSAAQATPEGKIAKVATTVADKFSGIQKKLGMLSKATGYAGQALFLLFLSLMLAGIYDAFILPMLPYLHFFFATVGIMVLAVEGVIAGPIWAFMHIRMDGDELFTGSQSPGYRILFNLLFRIPLTLFGFFFSMLVFDACIWLQHLTIWPAMESATADASFGLVGTVVYMIVITGMTYTIANRSFAMITAVPDRVTRWFSGESAASGDETQLAMANVGSIRGKVQGGVSNAAGMASRQGGGGSRGSSEKADTAREAANITSPTAADAMAAEESTIENSAESASRQEDREGRGNTVINTVNDSEE
>NZ_CP039845.1|WP_160256089.1|403670_404336_+|hypothetical-protein
MGDTVNSFLMGQAAADLLNSLKARFDDARNDAEIRSLMYQMRDAYERQVIALKKNIDILKSDLAAEIETRNLACDGVEKLGRRRDELKKKNSDLAAQNADLQSRNTVLEEENESLKLQLKKSLAEAVVYSSVAYAAKTVLEASPELRERTRQQYTNHITACIKKSLERIREQNGDEMFQFAAAYVNWASTNYLKDVGHDVQKLVFDTLNQNRNRSLNHTAK
>NZ_CP039845.1|WP_160256088.1|403269_403530_+|hypothetical-protein
MLDISSEGVGNQSGNETPDNDILARLRPSDETPEMVLCRREVMRRFNPLLFKGPGKQNPEEEEHTLAEQDHSVCTDSSTPPSSADT
>NZ_CP039845.1|WP_124296401.1|401781_402282_+|hypothetical-protein
MMTLTTCSAITLCEDEIDLVSKKLDPLALPLDLLKPDDNFPSFHCGLNEIIPRNESKGSANYIRSVLRSFAHHAVTGVRPVVVVCSYPFSISEHRDILIEAKFNPGRMIIVRAENDQAAIDIAKKITLNEKVTFILCALKDKPNEGALNELANLALKQVKKIFLAR
>NZ_CP039845.1|WP_160256087.1|400885_401662_-|hypothetical-protein
MSQNTSCPADKHFTPDQIAVLQSELKELGRSLSTLSGLLSEQSSFDIKVRQEVVPLAYNVASSHFDRIGKILGIETETASQRNRRSESLRNANMRIRELEDLIGKGVQPGSLQSALKIGEKTIADWWHDSGFSFVRATTFKPYECAVQLSCAIREPSRYSETPVTDKKNAKDAQDVLRDKGFVLLEEEEGRGDFVLVDCDQTKAALLRLIKERFPSAFVKSFENRTMRYFGGGDTDCFSIKSVELSIRDYKEIFLPSN
>NZ_CP039845.1|WP_160256086.1|399817_400636_-|hypothetical-protein
MTASDKIEAFNGLLKDFVAYRLRKKKVINESDLPSHEQIAEYIYDLSFRARHVFPATHISKCIHPSSRSRNIRLDRKTAIHHGFVGTSEILKSKDVTIDVAAGAVNQDVAAFLSLEIDGKLLADLISEGDEDIYYVLGLYAQEVDLVMGRLSSIDDRPPSPFDKQIFWMNGNDACSDQDYVVLQPVFPSTLLHYLHTQIKNANSKENGQARSARRDKEPCDTSFIMFPGLALRQIGGTKPHNISYLNAKRFGENFLLPSLPPKWSSTKRPSL
>NZ_CP039845.1|WP_124297917.1|412788_413337_-|hypothetical-protein
MADKLDQDDLKVLKYCGYKMEEGLLCLHLKDTPPHVCPPGPAYNSICEERIELTPLPDGNYNAVLKSLDPTSSDVCLMGVGVKDIPLFTVACANVCAMDGEFTVLYVNGDDVAVNNPYADMTYGDWQGQIVDGRVILDKPTDPQYLAAAEKYFDHYLRGEPVIEPEYDRGWDTTPTSPSSGK
>NZ_CP039845.1|WP_160256095.1|413496_414201_+|hypothetical-protein
MTHFKADGLTNKLSTHFGNVPIPSRMLNLRRLNSGLPIPKFATWEGDKPNLTVMNRDFFGTALRNKLCWICGQKMGRFASFVGGPKSTASKCFVEPPMHRDCAEFAMQVCPYLVTGNNERKNKLTPLEEKQHRSAGTDPDNTIIFGMSISNDWHFISGENCFFLKNVAEVIWWKHGKLASSKEAEKAVLEGEQAVQAAMKEMQSLTRSRRLKKYPDLDLGRAVWSPKRPINGKI
>NZ_CP039845.1|WP_160256096.1|414201_414603_+|hypothetical-protein
MIGCKNNGERQDVYLASRSVPKSSKRMQILQQWHGRVTLISSVGFLARLIDLTSGDDKESSEVEFFWHHLSPENRQSVCLGTTFKWLIGYKTNDGTTRRFSEIKLDRPGCWKGDDFKKADACADKLSQGIKWD
>NZ_CP039845.1|WP_124297914.1|414688_415258_+|hypothetical-protein
MNYGNFTPGFIDALAKIIGNRSVLEVYAGNGFLAKSLRERGVQIYPTSLFSSHDGHQLGMYCEVAESSSFEAVYRQGDQFDVLLMSWPITDFSTFFCSKAWLGKEQISRPIIFIGELPGSLLGHSTMLSGCACDNFFASIADMTLIEEYEPRNILDRAAILKVSKEKVADQEKLLFRGTAQRNRALQEG
>NZ_CP039845.1|WP_160256097.1|415263_415995_+|hypothetical-protein
MGRFGTIIIAAGIAGIVTQAACLTLAGNPITDSQKAERIRKIYSNEITPTTSDYRLLRQDINRALAAYPEVPSDKLLHTHSIQADVESRVPCSMNTSGNSYGEQIGTACYLDGPETEWFVRDEFPKRATAQQTKAFLAEKKASQDIENKMHSQIAWVHSSPTYALEVECLKSVCTVTESPQEMNNSLVYTFPFIPSEWTQDPITMDQIRSLPSFGKSSRKEVAGNNKVEISNSLDADDHGQAF
>NZ_CP039845.1|WP_160256098.1|416451_418167_+|N-6-DNA-methylase
MASASAILRNFQPQSYDEVSCILFLAALNILQARGEMSGEINAHSLKKMAKFEWKRRCIKEEMTEWLHDFGYDTLLRLPGEFFNIEFDRLKLGASDTDDILGFLYQALTREGEKSISGAYYTPTELVRSSLAWIKSQNEVISGYLDPCCGSGQFLLRAIPLLGLPPERIYGFDKDPIAVKVARLNILISNTKMTEKPHIYRHDFLHDNLDFTFYDQISAIATNPPWGAIKTTQISHNLSLEVSSGETFSLFIAQALKKAPAGTFLSFILPESILNIKMHSDIRTIILANSKIEHIHLLGKPFPNVFTNVIRLDLVKTNTDIGSNHSVKINNGSSIHSIRQNYFQNDEIKSFNTIIRDNDLDLFRHLFERSEGDLKGKVEWAMGIVTGNNKRFLSSQKKDGMEEILKGSDIFHYSHAAPCNYIRFDRENLQQVAKDKYIRAPEKLIYRFISKNLVFAYDNQMMLTLNSANILIPTKKLGFSLKTLLAILNSNICQFIYLLKYPTLKVLKGNVESLPLPEITEKCDHTLSVLAGQAIDGDKKSISLINEGLYSLYDLNSCQIDHVRNTILRYS
>NZ_CP039845.1|WP_160256099.1|418206_418836_+|hypothetical-protein
MSITHITFSSQNWAEKHHKGFDKIVSVYEQGARRPRFGNRSPGSILYKNIPDQDFYFQPEASYPSTQDITSFLLFCTSASPKSILIHCKMGVARSAALAAILLAYLQPNISTETIFRSLPNYRAGRPNDVYPTRTLLAPAQEAIQRPDLLSNAYRTFKSAIGYDRMKLHAHLAGLPPIETANLLSRRLKENPGLAPFFVSQRYIAETSL
>NZ_CP039845.1|WP_160256100.1|418854_419040_+|hypothetical-protein
MSENKSSQSVVNPANEAGEDSDFFPQTSKIIRENMEEKAELECDDGDAINGAFFLDNDGDD
>NZ_CP039845.1|WP_160256101.1|419078_419507_+|hypothetical-protein
MIRFSSSVTDLKKLPETADKPISLLEAGLKAAAPMTQIHGWAKDPYWGDKIVENRIIGYITIDADDLAVLRWSEIFQPIAEIGCTDFHASLTLYDAQGVWAGYELTGQPDHLGPQLELGEIDPSDLRLRRHNLTIGLSLPLK
>NZ_CP039845.1|WP_160256102.1|419526_420210_+|hypothetical-protein
MTGHGQQPRIFIRPVARIQNCQDINDFRRASAQLRPINGDCVLSIPVANDDTLEETRNILINVLKIKRGWGRLNSLNSDSQKPYEVSDIISAAEFFIPEGDNNSLFDSEASPYNRKDCFSPTTWLVQLIPLDNSMSRLDLYGEILERIKDGEFDLVTEGLIPKGFIKETDICYKYCDGALFRTESQAQNKDYPEGAGQIVNINDLLEENKRIYENHWPPESSSSEYY

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68500-68529	0	1.0
NZ_CP039845_1	1.2\|68561\|30\|NZ_CP039845\|PILER-CR	68561-68590	30	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68561-68590	0	1.0
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68499-68530	0	1.0
NZ_CP039845_1	1.4\|68560\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68560-68591	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68560-68591	0	1.0
NZ_CP039845_1	1.5\|68621\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68621-68652	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68621-68652	0	1.0
NZ_CP039845_1	1.6\|68682\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68682-68713	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68682-68713	0	1.0
NZ_CP039845_1	1.7\|68743\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68743-68774	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68743-68774	0	1.0
NZ_CP039845_1	1.8\|68804\|31\|NZ_CP039845\|CRISPRCasFinder,CRT	68804-68834	31	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68804-68834	0	1.0
NZ_CP039845_1	1.9\|68864\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68864-68895	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	68864-68895	0	1.0
NZ_CP039845_2	2.1\|94117\|44\|NZ_CP039845\|CRISPRCasFinder	94117-94160	44	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	94117-94160	0	1.0
NZ_CP039845_3	3.1\|127749\|33\|NZ_CP039845\|CRISPRCasFinder	127749-127781	33	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	127749-127781	0	1.0
NZ_CP039845_4	4.1\|271779\|42\|NZ_CP039845\|CRISPRCasFinder	271779-271820	42	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	271779-271820	0	1.0
NZ_CP039845_5	5.1\|327220\|29\|NZ_CP039845\|PILER-CR	327220-327248	29	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327220-327248	0	1.0
NZ_CP039845_5	5.2\|327280\|29\|NZ_CP039845\|PILER-CR	327280-327308	29	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327280-327308	0	1.0
NZ_CP039845_5	5.3\|327217\|32\|NZ_CP039845\|CRISPRCasFinder	327217-327248	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327217-327248	0	1.0
NZ_CP039845_5	5.4\|327277\|32\|NZ_CP039845\|CRISPRCasFinder	327277-327308	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327277-327308	0	1.0
NZ_CP039845_5	5.5\|327337\|32\|NZ_CP039845\|CRISPRCasFinder	327337-327368	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327337-327368	0	1.0
NZ_CP039845_5	5.6\|327397\|32\|NZ_CP039845\|CRISPRCasFinder	327397-327428	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327397-327428	0	1.0
NZ_CP039845_5	5.7\|327457\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327457-327488	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327457-327488	0	1.0
NZ_CP039845_5	5.8\|327517\|33\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327517-327549	33	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327517-327549	0	1.0
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327578-327609	0	1.0
NZ_CP039845_5	5.10\|327638\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327638-327669	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327638-327669	0	1.0
NZ_CP039845_5	5.11\|327698\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327698-327729	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327698-327729	0	1.0
NZ_CP039845_5	5.12\|327758\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327758-327789	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327758-327789	0	1.0
NZ_CP039845_5	5.13\|327818\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327818-327849	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327818-327849	0	1.0
NZ_CP039845_5	5.14\|327878\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327878-327909	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327878-327909	0	1.0
NZ_CP039845_5	5.15\|327938\|31\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327938-327968	31	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327938-327968	0	1.0
NZ_CP039845_5	5.16\|327997\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327997-328028	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327997-328028	0	1.0
NZ_CP039845_5	5.17\|328057\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328057-328088	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328057-328088	0	1.0
NZ_CP039845_5	5.18\|328117\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328117-328148	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328117-328148	0	1.0
NZ_CP039845_5	5.19\|328177\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328177-328208	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328177-328208	0	1.0
NZ_CP039845_5	5.20\|328237\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328237-328268	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328237-328268	0	1.0
NZ_CP039845_5	5.21\|328297\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328297-328328	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328297-328328	0	1.0
NZ_CP039845_5	5.22\|328357\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328357-328388	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328357-328388	0	1.0
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328417-328448	0	1.0
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328477-328508	0	1.0
NZ_CP039845_5	5.25\|328537\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328537-328568	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328537-328568	0	1.0
NZ_CP039845_5	5.26\|328597\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328597-328628	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328597-328628	0	1.0
NZ_CP039845_5	5.27\|328657\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328657-328688	32	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328657-328688	0	1.0
NZ_CP039845_5	5.28\|327213\|36\|NZ_CP039845\|CRT	327213-327248	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327213-327248	0	1.0
NZ_CP039845_5	5.29\|327273\|36\|NZ_CP039845\|CRT	327273-327308	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327273-327308	0	1.0
NZ_CP039845_5	5.30\|327333\|36\|NZ_CP039845\|CRT	327333-327368	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327333-327368	0	1.0
NZ_CP039845_5	5.31\|327393\|36\|NZ_CP039845\|CRT	327393-327428	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327393-327428	0	1.0
NZ_CP039845_5	5.32\|327453\|36\|NZ_CP039845\|CRT	327453-327488	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327453-327488	0	1.0
NZ_CP039845_5	5.33\|327513\|37\|NZ_CP039845\|CRT	327513-327549	37	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327513-327549	0	1.0
NZ_CP039845_5	5.34\|327574\|36\|NZ_CP039845\|CRT	327574-327609	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327574-327609	0	1.0
NZ_CP039845_5	5.35\|327634\|36\|NZ_CP039845\|CRT	327634-327669	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327634-327669	0	1.0
NZ_CP039845_5	5.36\|327694\|36\|NZ_CP039845\|CRT	327694-327729	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327694-327729	0	1.0
NZ_CP039845_5	5.37\|327754\|36\|NZ_CP039845\|CRT	327754-327789	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327754-327789	0	1.0
NZ_CP039845_5	5.38\|327814\|36\|NZ_CP039845\|CRT	327814-327849	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327814-327849	0	1.0
NZ_CP039845_5	5.39\|327874\|36\|NZ_CP039845\|CRT	327874-327909	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327874-327909	0	1.0
NZ_CP039845_5	5.40\|327934\|35\|NZ_CP039845\|CRT	327934-327968	35	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327934-327968	0	1.0
NZ_CP039845_5	5.41\|327993\|36\|NZ_CP039845\|CRT	327993-328028	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	327993-328028	0	1.0
NZ_CP039845_5	5.42\|328053\|36\|NZ_CP039845\|CRT	328053-328088	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328053-328088	0	1.0
NZ_CP039845_5	5.43\|328113\|36\|NZ_CP039845\|CRT	328113-328148	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328113-328148	0	1.0
NZ_CP039845_5	5.44\|328173\|36\|NZ_CP039845\|CRT	328173-328208	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328173-328208	0	1.0
NZ_CP039845_5	5.45\|328233\|36\|NZ_CP039845\|CRT	328233-328268	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328233-328268	0	1.0
NZ_CP039845_5	5.46\|328293\|36\|NZ_CP039845\|CRT	328293-328328	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328293-328328	0	1.0
NZ_CP039845_5	5.47\|328353\|36\|NZ_CP039845\|CRT	328353-328388	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328353-328388	0	1.0
NZ_CP039845_5	5.48\|328413\|36\|NZ_CP039845\|CRT	328413-328448	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328413-328448	0	1.0
NZ_CP039845_5	5.49\|328473\|36\|NZ_CP039845\|CRT	328473-328508	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328473-328508	0	1.0
NZ_CP039845_5	5.50\|328533\|36\|NZ_CP039845\|CRT	328533-328568	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328533-328568	0	1.0
NZ_CP039845_5	5.51\|328593\|36\|NZ_CP039845\|CRT	328593-328628	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328593-328628	0	1.0
NZ_CP039845_5	5.52\|328653\|36\|NZ_CP039845\|CRT	328653-328688	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	328653-328688	0	1.0
NZ_CP039845_6	6.1\|412622\|36\|NZ_CP039845\|CRISPRCasFinder	412622-412657	36	NZ_CP039845	Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence	412622-412657	0	1.0
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	544227-544256	3	0.9
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	544226-544257	4	0.875
NZ_CP039845_5	5.1\|327220\|29\|NZ_CP039845\|PILER-CR	327220-327248	29	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3190898-3190926	4	0.862
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	230159-230188	5	0.833
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	230158-230189	5	0.844
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1467912-1467941	6	0.8
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	664459-664488	6	0.8
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	665195-665224	6	0.8
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	617886-617915	6	0.8
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP045327	Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence	16756-16785	6	0.8
NZ_CP039845_1	1.2\|68561\|30\|NZ_CP039845\|PILER-CR	68561-68590	30	MN444870	Gordonia phage Syleon, complete genome	35935-35964	6	0.8
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	1467911-1467942	6	0.812
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	664458-664489	6	0.812
NZ_CP039845_5	5.1\|327220\|29\|NZ_CP039845\|PILER-CR	327220-327248	29	CP047389	Agrobacterium sp. CGMCC 11546 plasmid pA	263566-263594	6	0.793
NZ_CP039845_5	5.1\|327220\|29\|NZ_CP039845\|PILER-CR	327220-327248	29	NZ_CP022991	Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence	275287-275315	6	0.793
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	467934-467963	7	0.767
NZ_CP039845_1	1.2\|68561\|30\|NZ_CP039845\|PILER-CR	68561-68590	30	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	95974-96003	7	0.767
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	665194-665225	7	0.781
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	617885-617916	7	0.781
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP045327	Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence	16755-16786	7	0.781
NZ_CP039845_1	1.4\|68560\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68560-68591	32	NZ_CP032313	Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence	95973-96004	7	0.781
NZ_CP039845_1	1.4\|68560\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68560-68591	32	MN444870	Gordonia phage Syleon, complete genome	35934-35965	7	0.781
NZ_CP039845_5	5.3\|327217\|32\|NZ_CP039845\|CRISPRCasFinder	327217-327248	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3190895-3190926	7	0.781
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	96010-96041	7	0.781
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	MN096372	Mycobacterium phage Zolita, complete genome	13630-13661	7	0.781
NZ_CP039845_5	5.25\|328537\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328537-328568	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	446931-446962	7	0.781
NZ_CP039845_1	1.1\|68500\|30\|NZ_CP039845\|PILER-CR	68500-68529	30	MF403008	Agrobacterium phage Atu_ph07, complete genome	323780-323809	8	0.733
NZ_CP039845_1	1.2\|68561\|30\|NZ_CP039845\|PILER-CR	68561-68590	30	MN694509	Marine virus AFVG_250M847, complete genome	5672-5701	8	0.733
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	467933-467964	8	0.75
NZ_CP039845_5	5.17\|328057\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328057-328088	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	295388-295419	8	0.75
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	MH744418	Streptomyces phage JustBecause, complete genome	135182-135213	8	0.75
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	MT310898	Streptomyces phage Kela, complete genome	135765-135796	8	0.75
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_AP013104	Bradyrhizobium elkanii USDA 61 plasmid pBel61, complete sequence	11323-11354	8	0.75
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP020865	Paenibacillus sp. Cedars plasmid unnamed2, complete sequence	21972-22003	8	0.75
NZ_CP039845_5	5.25\|328537\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328537-328568	32	JN700520	Staphylococcus phage StB12, complete genome	27038-27069	8	0.75
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	MF403008	Agrobacterium phage Atu_ph07, complete genome	323779-323810	9	0.719
NZ_CP039845_1	1.4\|68560\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68560-68591	32	MN694509	Marine virus AFVG_250M847, complete genome	5671-5702	9	0.719
NZ_CP039845_1	1.5\|68621\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68621-68652	32	NC_008043	Ruegeria sp. TM1040 megaplasmid, complete sequence	381031-381062	9	0.719
NZ_CP039845_5	5.7\|327457\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327457-327488	32	MN855635	Bacteriophage sp. isolate 522, complete genome	232-263	9	0.719
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NC_010283	Bacillus thuringiensis plasmid pFR55, complete sequence	24372-24403	9	0.719
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	230368-230399	9	0.719
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NZ_CP020747	Bacillus mycoides strain Gnyt1 plasmid unnamed4, complete sequence	54467-54498	9	0.719
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NC_018687	Bacillus thuringiensis MC28 plasmid pMC189, complete sequence	3136-3167	9	0.719
NZ_CP039845_5	5.11\|327698\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327698-327729	32	NZ_CP042915	Rhodococcus qingshengii strain RL1 plasmid unnamed2	35213-35244	9	0.719
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP021083	Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence	231528-231559	9	0.719
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP015867	Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence	497531-497562	9	0.719
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	790861-790892	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP022017	Salmonella enterica subsp. enterica serovar Quebec str. S-1267 plasmid punnamed2, complete sequence	871-902	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP016416	Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence	5357-5388	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP016416	Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence	125991-126022	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	NZ_CP016309	Vibrio scophthalmi strain VS-12 plasmid pVS127, complete sequence	67785-67816	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	MK448839	Streptococcus phage Javan102, complete genome	43285-43316	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	MK448667	Streptococcus phage Javan105, complete genome	43285-43316	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	MK448843	Streptococcus phage Javan112, complete genome	43283-43314	9	0.719
NZ_CP039845_5	5.24\|328477\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328477-328508	32	MK448841	Streptococcus phage Javan108, complete genome	43285-43316	9	0.719
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	MN694644	Marine virus AFVG_250M391, complete genome	22223-22254	10	0.688
NZ_CP039845_1	1.3\|68499\|32\|NZ_CP039845\|CRISPRCasFinder,CRT	68499-68530	32	MN693019	Marine virus AFVG_117M86, complete genome	22205-22236	10	0.688
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	CP024686	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence	309570-309601	10	0.688
NZ_CP039845_5	5.9\|327578\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	327578-327609	32	NC_018688	Bacillus thuringiensis MC28 plasmid pMC319, complete sequence	18014-18045	10	0.688
NZ_CP039845_5	5.17\|328057\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328057-328088	32	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	603162-603193	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	348585-348616	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	81392-81423	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	45769-45800	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP021082	Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence	417530-417561	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	81392-81423	10	0.688
NZ_CP039845_5	5.23\|328417\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328417-328448	32	CP042595	Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence	168349-168380	10	0.688
NZ_CP039845_5	5.25\|328537\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328537-328568	32	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1144132-1144163	10	0.688
NZ_CP039845_5	5.25\|328537\|32\|NZ_CP039845\|CRISPRCasFinder,PILER-CR	328537-328568	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	450050-450081	10	0.688
NZ_CP039845_5	5.48\|328413\|36\|NZ_CP039845\|CRT	328413-328448	36	LR134122	Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2	96010-96045	11	0.694
NZ_CP039845_5	5.50\|328533\|36\|NZ_CP039845\|CRT	328533-328568	36	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	446931-446966	11	0.694

1. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
gctgagtgtggcggctggggtgggattcga	Protospacer
******************************

2. spacer 1.2|68561|30|NZ_CP039845|PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gaatgcacccggaggacattaaggccgcac	CRISPR spacer
gaatgcacccggaggacattaaggccgcac	Protospacer
******************************

3. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tgctgagtgtggcggctggggtgggattcgaa	Protospacer
********************************

4. spacer 1.4|68560|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ggaatgcacccggaggacattaaggccgcact	CRISPR spacer
ggaatgcacccggaggacattaaggccgcact	Protospacer
********************************

5. spacer 1.5|68621|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtggcacgacaaacgggacggagggcatcg	CRISPR spacer
gcgtggcacgacaaacgggacggagggcatcg	Protospacer
********************************

6. spacer 1.6|68682|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctatcaccgaaatgctcgccaatcctgctgtc	CRISPR spacer
ctatcaccgaaatgctcgccaatcctgctgtc	Protospacer
********************************

7. spacer 1.7|68743|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tcaaaatcccgtctgtatcggatggggcgcgc	CRISPR spacer
tcaaaatcccgtctgtatcggatggggcgcgc	Protospacer
********************************

8. spacer 1.8|68804|31|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cggcaaggcttatgtggaggctgggggattc	CRISPR spacer
cggcaaggcttatgtggaggctgggggattc	Protospacer
*******************************

9. spacer 1.9|68864|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gctgttgctggaggcgccacaatcaacgactg	CRISPR spacer
gctgttgctggaggcgccacaatcaacgactg	Protospacer
********************************

10. spacer 2.1|94117|44|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgattttcggtctctgaactgcaacctgagatgccagaaacga	CRISPR spacer
ctgattttcggtctctgaactgcaacctgagatgccagaaacga	Protospacer
********************************************

11. spacer 3.1|127749|33|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cagtaatgtcgattttctgttaagcagacataa	CRISPR spacer
cagtaatgtcgattttctgttaagcagacataa	Protospacer
*********************************

12. spacer 4.1|271779|42|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cccatcactgatgaacacgatgatttgccagtagtagacacc	CRISPR spacer
cccatcactgatgaacacgatgatttgccagtagtagacacc	Protospacer
******************************************

13. spacer 5.1|327220|29|NZ_CP039845|PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
tggcaggcgcggggtcgccgtgctgtagc	Protospacer
*****************************

14. spacer 5.2|327280|29|NZ_CP039845|PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgaggcggttagagagagaagccggtgt	CRISPR spacer
ctgaggcggttagagagagaagccggtgt	Protospacer
*****************************

15. spacer 5.3|327217|32|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgtggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
ctgtggcaggcgcggggtcgccgtgctgtagc	Protospacer
********************************

16. spacer 5.4|327277|32|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgctgaggcggttagagagagaagccggtgt	CRISPR spacer
ctgctgaggcggttagagagagaagccggtgt	Protospacer
********************************

17. spacer 5.5|327337|32|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtagtccaagacaatccgtgcagcctgaatgc	CRISPR spacer
gtagtccaagacaatccgtgcagcctgaatgc	Protospacer
********************************

18. spacer 5.6|327397|32|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tagtcggccttcaccccttccaatgatccctt	CRISPR spacer
tagtcggccttcaccccttccaatgatccctt	Protospacer
********************************

19. spacer 5.7|327457|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgccaggactttgcaaaacctaatcaggcaaa	CRISPR spacer
tgccaggactttgcaaaacctaatcaggcaaa	Protospacer
********************************

20. spacer 5.8|327517|33|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cctccactggtgttgtattcccgatccgcgcac	CRISPR spacer
cctccactggtgttgtattcccgatccgcgcac	Protospacer
*********************************

21. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatcggaattagcgtcctcgtgt	Protospacer
********************************

22. spacer 5.10|327638|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgcgcaggtaaatgccagcgttcccaatcat	CRISPR spacer
ttgcgcaggtaaatgccagcgttcccaatcat	Protospacer
********************************

23. spacer 5.11|327698|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

aatttttttcagtgcgggagcgagcgcagagc	CRISPR spacer
aatttttttcagtgcgggagcgagcgcagagc	Protospacer
********************************

24. spacer 5.12|327758|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgtaagaggcttttagaagaggcgcaggact	CRISPR spacer
tcgtaagaggcttttagaagaggcgcaggact	Protospacer
********************************

25. spacer 5.13|327818|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

acagaaaaaagataaatccgaacgggtaacaa	CRISPR spacer
acagaaaaaagataaatccgaacgggtaacaa	Protospacer
********************************

26. spacer 5.14|327878|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggcggaagcggcggtctctgtgttcgctgt	CRISPR spacer
ctggcggaagcggcggtctctgtgttcgctgt	Protospacer
********************************

27. spacer 5.15|327938|31|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

agaaaaatgagcggatcagagggcgaagccc	CRISPR spacer
agaaaaatgagcggatcagagggcgaagccc	Protospacer
*******************************

28. spacer 5.16|327997|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gataccccgttcggtcttggcaatcaggttcc	CRISPR spacer
gataccccgttcggtcttggcaatcaggttcc	Protospacer
********************************

29. spacer 5.17|328057|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcaagggggttcgtccaggcacatggacgag	CRISPR spacer
cgcaagggggttcgtccaggcacatggacgag	Protospacer
********************************

30. spacer 5.18|328117|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgagaacgctagacacaaaacccgcgcaatct	CRISPR spacer
cgagaacgctagacacaaaacccgcgcaatct	Protospacer
********************************

31. spacer 5.19|328177|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtttctggcggtacacaagacagtcagacc	CRISPR spacer
gcgtttctggcggtacacaagacagtcagacc	Protospacer
********************************

32. spacer 5.20|328237|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgacaagcccagtgacgggaattgtgacaaga	CRISPR spacer
cgacaagcccagtgacgggaattgtgacaaga	Protospacer
********************************

33. spacer 5.21|328297|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgtcggaatacaagccagcttgcataaacta	CRISPR spacer
gtgtcggaatacaagccagcttgcataaacta	Protospacer
********************************

34. spacer 5.22|328357|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

aaaatgggcgcagcgtcagagcgtttggagct	CRISPR spacer
aaaatgggcgcagcgtcagagcgtttggagct	Protospacer
********************************

35. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
caagaagcgcagaacccggcggcccggctccg	Protospacer
********************************

36. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaaattcagcaattttcttccgaaaatctg	Protospacer
********************************

37. spacer 5.25|328537|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
ccaaaaatcgcagaaaatcaaggcattgaggc	Protospacer
********************************

38. spacer 5.26|328597|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

actgcgctctgtccgtttggatttttgacaga	CRISPR spacer
actgcgctctgtccgtttggatttttgacaga	Protospacer
********************************

39. spacer 5.27|328657|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgagtgttggtgtcgatctttacgcgccagc	CRISPR spacer
ctgagtgttggtgtcgatctttacgcgccagc	Protospacer
********************************

40. spacer 5.28|327213|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgactgtggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
gtgactgtggcaggcgcggggtcgccgtgctgtagc	Protospacer
************************************

41. spacer 5.29|327273|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggctgctgaggcggttagagagagaagccggtgt	CRISPR spacer
gtggctgctgaggcggttagagagagaagccggtgt	Protospacer
************************************

42. spacer 5.30|327333|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgggtagtccaagacaatccgtgcagcctgaatgc	CRISPR spacer
gtgggtagtccaagacaatccgtgcagcctgaatgc	Protospacer
************************************

43. spacer 5.31|327393|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtagtcggccttcaccccttccaatgatccctt	CRISPR spacer
gtggtagtcggccttcaccccttccaatgatccctt	Protospacer
************************************

44. spacer 5.32|327453|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtgccaggactttgcaaaacctaatcaggcaaa	CRISPR spacer
gtggtgccaggactttgcaaaacctaatcaggcaaa	Protospacer
************************************

45. spacer 5.33|327513|37|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggcctccactggtgttgtattcccgatccgcgcac	CRISPR spacer
gtggcctccactggtgttgtattcccgatccgcgcac	Protospacer
*************************************

46. spacer 5.34|327574|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggaattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
gtggaattttttgaatcggaattagcgtcctcgtgt	Protospacer
************************************

47. spacer 5.35|327634|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggttgcgcaggtaaatgccagcgttcccaatcat	CRISPR spacer
ctggttgcgcaggtaaatgccagcgttcccaatcat	Protospacer
************************************

48. spacer 5.36|327694|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggaatttttttcagtgcgggagcgagcgcagagc	CRISPR spacer
ctggaatttttttcagtgcgggagcgagcgcagagc	Protospacer
************************************

49. spacer 5.37|327754|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggtcgtaagaggcttttagaagaggcgcaggact	CRISPR spacer
gtggtcgtaagaggcttttagaagaggcgcaggact	Protospacer
************************************

50. spacer 5.38|327814|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggacagaaaaaagataaatccgaacgggtaacaa	CRISPR spacer
gtggacagaaaaaagataaatccgaacgggtaacaa	Protospacer
************************************

51. spacer 5.39|327874|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggctggcggaagcggcggtctctgtgttcgctgt	CRISPR spacer
gtggctggcggaagcggcggtctctgtgttcgctgt	Protospacer
************************************

52. spacer 5.40|327934|35|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggagaaaaatgagcggatcagagggcgaagccc	CRISPR spacer
gtggagaaaaatgagcggatcagagggcgaagccc	Protospacer
***********************************

53. spacer 5.41|327993|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtgggataccccgttcggtcttggcaatcaggttcc	CRISPR spacer
gtgggataccccgttcggtcttggcaatcaggttcc	Protospacer
************************************

54. spacer 5.42|328053|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtggcgcaagggggttcgtccaggcacatggacgag	CRISPR spacer
gtggcgcaagggggttcgtccaggcacatggacgag	Protospacer
************************************

55. spacer 5.43|328113|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggcgagaacgctagacacaaaacccgcgcaatct	CRISPR spacer
ctggcgagaacgctagacacaaaacccgcgcaatct	Protospacer
************************************

56. spacer 5.44|328173|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgggcgtttctggcggtacacaagacagtcagacc	CRISPR spacer
ctgggcgtttctggcggtacacaagacagtcagacc	Protospacer
************************************

57. spacer 5.45|328233|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggcgacaagcccagtgacgggaattgtgacaaga	CRISPR spacer
ctggcgacaagcccagtgacgggaattgtgacaaga	Protospacer
************************************

58. spacer 5.46|328293|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctgggtgtcggaatacaagccagcttgcataaacta	CRISPR spacer
ctgggtgtcggaatacaagccagcttgcataaacta	Protospacer
************************************

59. spacer 5.47|328353|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggaaaatgggcgcagcgtcagagcgtttggagct	CRISPR spacer
ctggaaaatgggcgcagcgtcagagcgtttggagct	Protospacer
************************************

60. spacer 5.48|328413|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggcaagaagcgcagaacccggcggcccggctccg	CRISPR spacer
ctggcaagaagcgcagaacccggcggcccggctccg	Protospacer
************************************

61. spacer 5.49|328473|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggatgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
ctggatgaaattcagcaattttcttccgaaaatctg	Protospacer
************************************

62. spacer 5.50|328533|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
ctggccaaaaatcgcagaaaatcaaggcattgaggc	Protospacer
************************************

63. spacer 5.51|328593|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggactgcgctctgtccgtttggatttttgacaga	CRISPR spacer
ctggactgcgctctgtccgtttggatttttgacaga	Protospacer
************************************

64. spacer 5.52|328653|36|NZ_CP039845|CRT matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctggctgagtgttggtgtcgatctttacgcgccagc	CRISPR spacer
ctggctgagtgttggtgtcgatctttacgcgccagc	Protospacer
************************************

65. spacer 6.1|412622|36|NZ_CP039845|CRISPRCasFinder matches to NZ_CP039845 (Acetobacter pasteurianus strain CICC 22518 plasmid pAP22518-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttatcaaattggtctaataatgaagacctaaggtct	CRISPR spacer
ttatcaaattggtctaataatgaagacctaaggtct	Protospacer
************************************

66. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 3, identity: 0.9

-gctgagtgtggcggctggggtgggattcga	CRISPR spacer
ggctgagc-tggcggatggggtgggattcga	Protospacer
 ******. ****** ***************

67. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 4, identity: 0.875

-tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tggctgagc-tggcggatggggtgggattcgaa	Protospacer
  ******. ****** ****************

68. spacer 5.1|327220|29|NZ_CP039845|PILER-CR matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 4, identity: 0.862

tggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
gggcaggcgcggggtggccgtgctgttgg	Protospacer
 ************** ********** *

69. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.833

gctgag--tgtggcggctggggtgggattcga	CRISPR spacer
--taaatttgtggcggatggggtgggattcga	Protospacer
  *.*.  ******** ***************

70. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 5, identity: 0.844

tgctgag--tgtggcggctggggtgggattcgaa	CRISPR spacer
--ctaaatttgtggcggatggggtgggattcgaa	Protospacer
  **.*.  ******** ****************

71. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
ggaaatggtggcggatggggtgggattcga	Protospacer
*  .*  ******* ***************

72. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 6, identity: 0.8

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
ggaaatggtggcggatggggtgggattcga	Protospacer
*  .*  ******* ***************

73. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
gaggaaaatggcggatggggtgggattcga	Protospacer
*  **. .****** ***************

74. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.8

--gctgagtgtggcggctggggtgggattcga	CRISPR spacer
aagccgg--atggcggatggggtgggattcga	Protospacer
  **.*.  .****** ***************

75. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 6, identity: 0.8

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
gctgatggtggcggctggggtggcggtcgg	Protospacer
*****  **************** . ***.

76. spacer 1.2|68561|30|NZ_CP039845|PILER-CR matches to MN444870 (Gordonia phage Syleon, complete genome) position: , mismatch: 6, identity: 0.8

gaatgcacccggaggacattaaggccgcac	CRISPR spacer
tgatcgacccggaggacgttaaggccgcgc	Protospacer
 .**  ***********.**********.*

77. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.812

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tggaaatggtggcggatggggtgggattcgaa	Protospacer
**  .*  ******* ****************

78. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 6, identity: 0.812

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tggaaatggtggcggatggggtgggattcgaa	Protospacer
**  .*  ******* ****************

79. spacer 5.1|327220|29|NZ_CP039845|PILER-CR matches to CP047389 (Agrobacterium sp. CGMCC 11546 plasmid pA) position: , mismatch: 6, identity: 0.793

tggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
ggttaggcgcggggtcgccgtcctggcgc	Protospacer
 * .***************** ***  **

80. spacer 5.1|327220|29|NZ_CP039845|PILER-CR matches to NZ_CP022991 (Paraburkholderia aromaticivorans strain BN5 plasmid pBN1, complete sequence) position: , mismatch: 6, identity: 0.793

tggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
tcgcgggcgcggggtcgccgtggtgatga	Protospacer
* **.***************** **  *

81. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.767

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
gaaggaattggcggatggggtgggattcga	Protospacer
*  *..  ****** ***************

82. spacer 1.2|68561|30|NZ_CP039845|PILER-CR matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 7, identity: 0.767

gaatgcacccggaggacattaaggccgcac	CRISPR spacer
actggcacaccgaggacattaaggccgcaa	Protospacer
.   **** * ******************

83. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
cgaggaaaatggcggatggggtgggattcgaa	Protospacer
.*  **. .****** ****************

84. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.781

--tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
aaagccgg--atggcggatggggtgggattcgaa	Protospacer
   **.*.  .****** ****************

85. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 7, identity: 0.781

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tgctgatggtggcggctggggtggcggtcggg	Protospacer
******  **************** . ***..

86. spacer 1.4|68560|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP032313 (Pannonibacter phragmitetus BB plasmid p.BB_1, complete sequence) position: , mismatch: 7, identity: 0.781

ggaatgcacccggaggacattaaggccgcact	CRISPR spacer
gactggcacaccgaggacattaaggccgcaat	Protospacer
*.   **** * ****************** *

87. spacer 1.4|68560|32|NZ_CP039845|CRISPRCasFinder,CRT matches to MN444870 (Gordonia phage Syleon, complete genome) position: , mismatch: 7, identity: 0.781

ggaatgcacccggaggacattaaggccgcact	CRISPR spacer
ctgatcgacccggaggacgttaaggccgcgct	Protospacer
  .**  ***********.**********.**

88. spacer 5.3|327217|32|NZ_CP039845|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 7, identity: 0.781

ctgtggcaggcgcggggtcgccgtgctgtagc	CRISPR spacer
tcagggcaggcgcggggtggccgtgctgttgg	Protospacer
... ************** ********** *

89. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 7, identity: 0.781

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tcggtggcgcagaaccctgcggcccggcgccg	Protospacer
. .* .*********** ********** ***

90. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MN096372 (Mycobacterium phage Zolita, complete genome) position: , mismatch: 7, identity: 0.781

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
ctttcatcgcagaacccggcaccccggctccg	Protospacer
*    * *************. **********

91. spacer 5.25|328537|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 7, identity: 0.781

ccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
ttgaaaatatcagaaaatcaaggcattgagat	Protospacer
...*****  ********************..

92. spacer 1.1|68500|30|NZ_CP039845|PILER-CR matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 8, identity: 0.733

gctgagtgtggcggctggggtgggattcga	CRISPR spacer
tacccctgtggaggatggggtgggattcga	Protospacer
  .   ***** ** ***************

93. spacer 1.2|68561|30|NZ_CP039845|PILER-CR matches to MN694509 (Marine virus AFVG_250M847, complete genome) position: , mismatch: 8, identity: 0.733

gaatgcacccggaggacattaaggccgcac	CRISPR spacer
ccgtccacccgaaggacatcaaggccgccg	Protospacer
  .* ******.*******.********

94. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
agaaggaattggcggatggggtgggattcgaa	Protospacer
 *  *..  ****** ****************

95. spacer 5.17|328057|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 8, identity: 0.75

cgcaagggggttcgtccaggcacatggacgag	CRISPR spacer
ggcgcgacggttcgtccaggcactcggacgac	Protospacer
 **. *. *************** .******

96. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MH744418 (Streptomyces phage JustBecause, complete genome) position: , mismatch: 8, identity: 0.75

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tacaccgcgcaggacccggcggcccgtctcct	Protospacer
.* .  ******.************* ****

97. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MT310898 (Streptomyces phage Kela, complete genome) position: , mismatch: 8, identity: 0.75

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tacaccgcgcaggacccggcggcccgtctcct	Protospacer
.* .  ******.************* ****

98. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_AP013104 (Bradyrhizobium elkanii USDA 61 plasmid pBel61, complete sequence) position: , mismatch: 8, identity: 0.75

caagaagcg-----cagaacccggcggcccggctccg	CRISPR spacer
-----atcgatcatcagaacccggcggcccgcttccg	Protospacer
     * **     ***************** .****

99. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP020865 (Paenibacillus sp. Cedars plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaacttcagcagttttcttcctcgctactg	Protospacer
***** *******.*********  .   ***

100. spacer 5.25|328537|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 8, identity: 0.75

ccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
gaagatattgcagaaaatgaaggcattgatac	Protospacer
  *.* **.********* ********** .*

101. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to MF403008 (Agrobacterium phage Atu_ph07, complete genome) position: , mismatch: 9, identity: 0.719

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
ctacccctgtggaggatggggtgggattcgaa	Protospacer
.  .   ***** ** ****************

102. spacer 1.4|68560|32|NZ_CP039845|CRISPRCasFinder,CRT matches to MN694509 (Marine virus AFVG_250M847, complete genome) position: , mismatch: 9, identity: 0.719

ggaatgcacccggaggacattaaggccgcact	CRISPR spacer
gccgtccacccgaaggacatcaaggccgccga	Protospacer
*  .* ******.*******.********

103. spacer 1.5|68621|32|NZ_CP039845|CRISPRCasFinder,CRT matches to NC_008043 (Ruegeria sp. TM1040 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.719

gcgtggcacgacaaacgggacggagggcatcg	CRISPR spacer
ctgtggcacgacaaacgtgtcggagtccgtga	Protospacer
 .*************** * *****  *.* .

104. spacer 5.7|327457|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MN855635 (Bacteriophage sp. isolate 522, complete genome) position: , mismatch: 9, identity: 0.719

tgccaggac-----tttgcaaaacctaatcaggcaaa	CRISPR spacer
-----aaacctatattggcaaaacctaaacaggcaaa	Protospacer
     ..**     ** *********** ********

105. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NC_010283 (Bacillus thuringiensis plasmid pFR55, complete sequence) position: , mismatch: 9, identity: 0.719

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttgaaa	Protospacer
************* ** ****** ..*.* .

106. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 9, identity: 0.719

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttgaaa	Protospacer
************* ** ****** ..*.* .

107. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP020747 (Bacillus mycoides strain Gnyt1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttgaaa	Protospacer
************* ** ****** ..*.* .

108. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NC_018687 (Bacillus thuringiensis MC28 plasmid pMC189, complete sequence) position: , mismatch: 9, identity: 0.719

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttgaaa	Protospacer
************* ** ****** ..*.* .

109. spacer 5.11|327698|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP042915 (Rhodococcus qingshengii strain RL1 plasmid unnamed2) position: , mismatch: 9, identity: 0.719

aatttttttcagtgcgggagcgagcgcagagc	CRISPR spacer
atgttttttgaatgcgggagcgagcggcaaat	Protospacer
*  ****** *.**************  .*..

110. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP021083 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI2, complete sequence) position: , mismatch: 9, identity: 0.719

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
catgaagcgcaggacccggcggccgatcgtgt	Protospacer
** *********.*********** . * .

111. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 9, identity: 0.719

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
ggaccacagccgaaccgggcggcccggctcct	Protospacer
 .*  *  ** ***** **************

112. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 9, identity: 0.719

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tccgaagcgcagaagccgccggcccgcgacct	Protospacer
.  *********** *** *******   **

113. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP022017 (Salmonella enterica subsp. enterica serovar Quebec str. S-1267 plasmid punnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgacattcagcatttttcttccgccgactca	Protospacer
**** ******** **********  .*....

114. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP016416 (Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg-----	CRISPR spacer
atgaaattcagtcattttcttcc-----tcctcaagc	Protospacer
***********. **********     **.

115. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP016416 (Vibrio scophthalmi strain VS-05 plasmid pVS127, complete sequence) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg-----	CRISPR spacer
atgaaattcagtcattttcttcc-----tcctcaagc	Protospacer
***********. **********     **.

116. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP016309 (Vibrio scophthalmi strain VS-12 plasmid pVS127, complete sequence) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg-----	CRISPR spacer
atgaaattcagtcattttcttcc-----tcctctagc	Protospacer
***********. **********     **.

117. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MK448839 (Streptococcus phage Javan102, complete genome) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaaattcaccaattttcatcccatacatac	Protospacer
********** ******** *** * *  .

118. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MK448667 (Streptococcus phage Javan105, complete genome) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaaattcaccaattttcatcccatacatac	Protospacer
********** ******** *** * *  .

119. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MK448843 (Streptococcus phage Javan112, complete genome) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaaattcaccaattttcatcccatacatac	Protospacer
********** ******** *** * *  .

120. spacer 5.24|328477|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to MK448841 (Streptococcus phage Javan108, complete genome) position: , mismatch: 9, identity: 0.719

atgaaattcagcaattttcttccgaaaatctg	CRISPR spacer
atgaaattcaccaattttcatcccatacatac	Protospacer
********** ******** *** * *  .

121. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to MN694644 (Marine virus AFVG_250M391, complete genome) position: , mismatch: 10, identity: 0.688

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tgctgagtgtggtggctgcggtgcttgctggc	Protospacer
************.***** ****    ..*.

122. spacer 1.3|68499|32|NZ_CP039845|CRISPRCasFinder,CRT matches to MN693019 (Marine virus AFVG_117M86, complete genome) position: , mismatch: 10, identity: 0.688

tgctgagtgtggcggctggggtgggattcgaa	CRISPR spacer
tgctgagtgtggtggctgcggtgcttgctggc	Protospacer
************.***** ****    ..*.

123. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to CP024686 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-2-313K, complete sequence) position: , mismatch: 10, identity: 0.688

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttaaaa	Protospacer
************* ** ****** ..*.. .

124. spacer 5.9|327578|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NC_018688 (Bacillus thuringiensis MC28 plasmid pMC319, complete sequence) position: , mismatch: 10, identity: 0.688

aattttttgaatcggaattagcgtcctcgtgt	CRISPR spacer
aattttttgaatctgatttagcggttttaaaa	Protospacer
************* ** ****** ..*.. .

125. spacer 5.17|328057|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 10, identity: 0.688

cgcaagggggttcgtccaggcacatggacgag	CRISPR spacer
cagcagggggttcgtccaggggcatgggatgt	Protospacer
*.  **************** .*****.  .

126. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tgccttctgccggacccggcggcccggctccg	Protospacer
..     .** *.*******************

127. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
atggacgcgcagaacccggccgcccgccgaga	Protospacer
  .** ************** ***** *   .

128. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
agggaaccgcagaacccggaggcccgctcgca	Protospacer
 ..*** ************ ****** .. *.

129. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
caggaagcgctgaacccggcggcgaaccagga	Protospacer
**.******* ************  . *   .

130. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
atggacgcgcagaacccggccgcccgccgaga	Protospacer
  .** ************** ***** *   .

131. spacer 5.23|328417|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to CP042595 (Streptomyces albogriseolus strain LBX-2 plasmid pSALBX2, complete sequence) position: , mismatch: 10, identity: 0.688

caagaagcgcagaacccggcggcccggctccg	CRISPR spacer
tccttcgggctgaacccggcggcccggatcct	Protospacer
.     * ** **************** ***

132. spacer 5.25|328537|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 10, identity: 0.688

ccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
gagggaatcgcataaaatcaaggccttgaccg	Protospacer
  ...******* *********** ****

133. spacer 5.25|328537|32|NZ_CP039845|CRISPRCasFinder,PILER-CR matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 10, identity: 0.688

ccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
gctgcaaacgcagaaaatcaagccattgcctg	Protospacer
 * . ** ************** *****

134. spacer 5.48|328413|36|NZ_CP039845|CRT matches to LR134122 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 2) position: , mismatch: 11, identity: 0.694

ctggcaagaagcgcagaacccggcggcccggctccg	CRISPR spacer
agtatcggtggcgcagaaccctgcggcccggcgccg	Protospacer
   .. .* .*********** ********** ***

135. spacer 5.50|328533|36|NZ_CP039845|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 11, identity: 0.694

ctggccaaaaatcgcagaaaatcaaggcattgaggc	CRISPR spacer
aaatttgaaaatatcagaaaatcaaggcattgagat	Protospacer
  . ...*****  ********************..

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP039847

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5701 : 64794

Burkholderia_virus(18.18%)

transposase,integrase

attL 11563:11622|attR 66940:67790

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035350857.1\|5701_6661_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_006115551.1\|7096_8530_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_006115550.1\|8532_9552_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_007397858.1\|9538_9688_+	DUF2474 domain-containing protein	NA	NA	NA	NA
WP_096884312.1\|10575_11693_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	6.6e-43	37.5
11563:11622	attL	NA	NA	NA	NA
WP_003631418.1\|13424_14198_-	TSUP family transporter	NA	NA	NA	NA
WP_096884248.1\|15337_16548_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_006117388.1\|16694_18191_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_039892039.1\|18515_19436_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_006117386.1\|19536_20691_-	acetylornithine deacetylase	NA	NA	NA	NA
WP_006117385.1\|20687_22304_-	alcohol dehydrogenase	A0A1V0S9M4	Catovirus	1.3e-47	29.0
WP_003630594.1\|22303_23698_-	allantoin permease	NA	NA	NA	NA
WP_003630593.1\|23820_24228_-	enamine deaminase RidA	NA	NA	NA	NA
WP_006115465.1\|24365_25847_-	aldehyde dehydrogenase	NA	NA	NA	NA
WP_012813251.1\|25846_27106_-	NAD(P)-binding domain-containing protein	NA	NA	NA	NA
WP_039891529.1\|27165_27843_-	DUF1028 domain-containing protein	NA	NA	NA	NA
WP_039891524.1\|29490_32388_-	nitrite reductase small subunit NirD	NA	NA	NA	NA
WP_063355032.1\|32417_34016_-	alginate export family protein	NA	NA	NA	NA
WP_039891527.1\|34106_35327_-	NarK/NasA family nitrate transporter	NA	NA	NA	NA
WP_006115457.1\|35810_36515_-	VIT family protein	NA	NA	NA	NA
WP_006115456.1\|36571_37924_-	HAMP domain-containing histidine kinase	A0A1B0VMK3	Pseudomonas_phage	8.9e-10	27.1
WP_006115455.1\|37920_38592_-	response regulator transcription factor	NA	NA	NA	NA
WP_006115454.1\|38591_41666_-	efflux RND transporter permease subunit	NA	NA	NA	NA
WP_039891523.1\|41665_42820_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_006115452.1\|42816_44052_-	TolC family protein	NA	NA	NA	NA
WP_006115451.1\|44070_44541_-	hypothetical protein	NA	NA	NA	NA
WP_160257198.1\|46211_47370_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.8e-88	65.3
WP_039891983.1\|48389_48779_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_039891981.1\|48787_49042_-	DNA-binding protein	NA	NA	NA	NA
WP_006117296.1\|49384_50386_-	TniQ family protein	NA	NA	NA	NA
WP_100070297.1\|50378_51266_-	AAA family ATPase	NA	NA	NA	NA
WP_096884314.1\|51304_52960_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_039891503.1\|54004_54445_+	hypothetical protein	NA	NA	NA	NA
WP_039891505.1\|54512_55247_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_050793094.1\|56234_56702_+	hypothetical protein	NA	NA	NA	NA
WP_006115447.1\|56901_57975_+	alkene reductase	NA	NA	NA	NA
WP_003618686.1\|58567_58828_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_003618711.1\|58824_59118_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2H4JBF4	uncultured_Caudovirales_phage	2.1e-17	48.9
WP_006115449.1\|59249_60512_+	sodium:proton antiporter	A0A2H4J428	uncultured_Caudovirales_phage	3.3e-14	31.0
WP_012812356.1\|61029_61389_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	1.3e-05	44.1
WP_012812355.1\|61385_61733_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	5.6e-25	51.4
WP_006115450.1\|61796_63407_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	3.7e-111	42.3
WP_082823248.1\|63531_64017_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_006115867.1\|64215_64794_-	DUF488 domain-containing protein	A0A2K9L455	Tupanvirus	5.1e-23	40.0
66940:67790	attR	NA	NA	NA	NA

DBSCAN-SWA_2

69936 : 136209

Burkholderia_virus(23.53%)

transposase,integrase

attL 71415:71474|attR 104964:106636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096884248.1\|69936_71146_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_081937143.1\|71135_71444_-	DUF1348 family protein	NA	NA	NA	NA
71415:71474	attL	NA	NA	NA	NA
WP_006115870.1\|71603_72989_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	2.5e-31	29.4
WP_081937144.1\|73005_73248_-	DUF1348 family protein	NA	NA	NA	NA
WP_035350860.1\|74172_74766_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003631147.1\|74853_76011_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_003631146.1\|76095_77487_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_035350857.1\|77733_78693_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_012812328.1\|78891_80142_+\|transposase	IS701-like element IS1452 family transposase	NA	NA	NA	NA
WP_006115724.1\|80611_80932_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA
WP_012813241.1\|80928_81330_-	nucleotidyltransferase	NA	NA	NA	NA
WP_006115727.1\|81329_82943_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	2.5e-43	28.8
WP_006115729.1\|83385_83739_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006115730.1\|83735_84158_+	arsenate reductase (glutaredoxin)	A0A2H4J8T1	uncultured_Caudovirales_phage	1.2e-48	67.9
WP_006115732.1\|84157_85453_+	arsenic transporter	A0A2H4J144	uncultured_Caudovirales_phage	3.6e-133	59.5
WP_012813273.1\|86182_87262_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4J2Q2	uncultured_Caudovirales_phage	5.3e-82	56.2
WP_012813272.1\|87575_87917_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_006115735.1\|87913_88210_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_087651418.1\|88352_89107_-\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	5.5e-25	47.1
WP_052583250.1\|89167_90094_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_100070283.1\|90203_91262_-	methionine synthase	NA	NA	NA	NA
WP_010511145.1\|91280_92312_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_006115743.1\|93764_98891_-	DEAD/DEAH box helicase family protein	I6WLR1	Burkholderia_virus	0.0e+00	39.8
WP_081461418.1\|99345_99981_+	ParA family protein	W0LIU2	Mycobacterium_phage	2.7e-09	30.9
WP_019088965.1\|99977_100676_+	hypothetical protein	NA	NA	NA	NA
WP_006115744.1\|101406_102330_-	Plasmid Encoded RepA protein	NA	NA	NA	NA
WP_006115745.1\|102821_104312_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_063355028.1\|104714_104987_+	hypothetical protein	NA	NA	NA	NA
WP_006115870.1\|105152_106538_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	2.5e-31	29.4
WP_097802310.1\|107739_108862_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.6e-52	42.5
104964:106636	attR	NA	NA	NA	NA
WP_006117366.1\|110681_112439_+	oleate hydratase	NA	NA	NA	NA
WP_006117365.1\|112508_113042_-	hypothetical protein	NA	NA	NA	NA
WP_003618711.1\|113227_113521_-	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	A0A2H4JBF4	uncultured_Caudovirales_phage	2.1e-17	48.9
WP_003618686.1\|113517_113778_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_012813198.1\|113991_114354_-	hypothetical protein	NA	NA	NA	NA
WP_114012474.1\|114503_115590_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.2e-43	37.5
WP_096884248.1\|116823_118033_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_063355004.1\|118622_120395_-	AMP-binding protein	A0A2K9KZV5	Tupanvirus	1.7e-08	20.7
WP_035366434.1\|120409_121657_-	MSMEG_0569 family flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_020936672.1\|121673_121961_-	MSMEG_0570 family nitrogen starvation response protein	NA	NA	NA	NA
WP_063355003.1\|121948_123127_-	MSMEG_0565 family glycosyltransferase	NA	NA	NA	NA
WP_063355027.1\|123123_124092_-	sll0787 family AIR synthase-like protein	NA	NA	NA	NA
WP_063355002.1\|124091_124655_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012813221.1\|124651_125761_-	MSMEG_0568 family radical SAM protein	NA	NA	NA	NA
WP_063355000.1\|125757_126732_-	Nit6803 family nitriliase	NA	NA	NA	NA
WP_045543339.1\|126756_127239_-	MSMEG_0572 family nitrogen starvation response protein	NA	NA	NA	NA
WP_063354999.1\|127579_129001_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_082823246.1\|129436_130060_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_012813226.1\|130063_130942_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_063354997.1\|131145_132666_+	MFS transporter	NA	NA	NA	NA
WP_096884248.1\|132760_133971_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	6.6e-97	64.0
WP_063354995.1\|133960_134233_-	hypothetical protein	NA	NA	NA	NA
WP_006115870.1\|134823_136209_-\|transposase	IS1380 family transposase	A0A1X9I6F6	Streptococcus_phage	2.5e-31	29.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP039846

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP039845

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP039847

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection