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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP040391 Klebsiella pneumoniae strain LSH-KPN25 chromosome, complete genome 3 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 10 0

Results visualization

1. NZ_CP040391
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040391_1 49908-50039 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040391_2 1796655-1796810 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP040391_3 4569130-4569224 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 445081 : 510672 72 uncultured_Caudovirales_phage(57.89%) protease,head,tail,capsid,tRNA,integrase,terminase,portal,transposase attL 457596:457613|attR 474897:474914
DBSCAN-SWA_2 662951 : 683427 19 Salmonella_phage(50.0%) integrase,transposase attL 662032:662045|attR 673166:673179
DBSCAN-SWA_3 1283429 : 1358560 81 Salmonella_phage(81.82%) head,tail,capsid,tRNA,integrase,terminase,lysis,portal,plate attL 1282262:1282308|attR 1317510:1317556
DBSCAN-SWA_4 1769222 : 1776127 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1819249 : 1828698 9 Enterobacteria_phage(25.0%) NA NA
DBSCAN-SWA_6 2826672 : 2837559 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3067263 : 3105729 56 uncultured_Caudovirales_phage(34.04%) terminase,integrase attL 3096842:3096856|attR 3102851:3102865
DBSCAN-SWA_8 3138662 : 3191702 66 Klebsiella_phage(19.61%) tail,integrase,terminase,holin,transposase attL 3138444:3138459|attR 3189008:3189023
DBSCAN-SWA_9 3568155 : 3653833 83 Salmonella_phage(50.0%) protease,head,tail,capsid,tRNA,integrase,lysis,terminase,plate,portal attL 3623609:3623627|attR 3653908:3653926
DBSCAN-SWA_10 4305833 : 4317487 13 Enterobacteria_phage(70.0%) integrase attL 4306283:4306297|attR 4329340:4329354
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage