CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP040391	Klebsiella pneumoniae strain LSH-KPN25 chromosome, complete genome	3 crisprs	csa3,RT,cas3,DEDDh,DinG,WYL	0	0	10	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP040391_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040391_1

49908-50039

Orphan

Consensus_repeat	Method
GCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040391_1

>merge|NZ_CP040391|1|49908-50039|CRISPRCasFinder
GCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGGCCTACGGGGTGGGGTCCCGCAGGCTTCCTCAGGACCGCCATCCGGCACAACCGCGGGTACGGTGCCTGACCGCCCGGCGGCGCTGCGCTTGCGCGGGCC

>NZ_CP040391|1|1|49908-50039|CRISPRCasFinder
GCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGGCCT	ACGGGGTGGGGTCCCGCAGGCTTCCTCAGGACCGCCATCCGGCACAACCGCGGGTACGGT
GCCTGACCGCCCGGCGGCGCTGCGCTTGCGCGGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040391.1\|WP_002923153.1\|55145_56516_+\|aromatic-acid/H+-symport-family-MFS-transporter	unknown	unknown	gnl\|CDD\|273327
NZ_CP040391.1\|WP_002923158.1\|51650_51953_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|376749
NZ_CP040391.1\|WP_002923201.1\|43837_44941_-\|2-aminoethylphosphonate--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|184076
NZ_CP040391.1\|WP_004151518.1\|41258_41618_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368831
NZ_CP040391.1\|WP_002923193.1\|46999_48112_+\|2-aminoethylphosphonate-ABC-transport-system-ATP-binding-subunit-PhnT	unknown	unknown	gnl\|CDD\|132302
NZ_CP040391.1\|WP_002923240.1\|40951_41275_-\|DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225495
NZ_CP040391.1\|WP_002923191.1\|48111_48972_+\|2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274484
NZ_CP040391.1\|WP_002923278.1\|40369_40822_+\|DUF1198-family-protein	unknown	unknown	gnl\|CDD\|369048
NZ_CP040391.1\|WP_002923196.1\|45082_45802_+\|phosphonate-utilization-transcriptional-regulator-PhnR	unknown	unknown	gnl\|CDD\|132380
NZ_CP040391.1\|WP_002923146.1\|59142_59883_+\|4-oxalmesaconate-hydratase	unknown	unknown	gnl\|CDD\|225031
NZ_CP040391.1\|WP_002923155.1\|53384_53699_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99906
NZ_CP040391.1\|WP_002923152.1\|56529_57792_+\|gallate-dioxygenase	unknown	unknown	gnl\|CDD\|184006
NZ_CP040391.1\|WP_002923156.1\|52050_53373_-\|PTS-cellobiose-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP040391.1\|WP_002923144.1\|59879_60593_+\|4-carboxy-4-hydroxy-2-oxoadipate-aldolase/oxaloacetate-decarboxylase	unknown	unknown	gnl\|CDD\|181735
NZ_CP040391.1\|WP_004151517.1\|50126_51506_-\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|367007
NZ_CP040391.1\|WP_002923195.1\|45980_46994_+\|2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|237887
NZ_CP040391.1\|WP_002923154.1\|53992_54934_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP040391.1\|WP_002923147.1\|57788_59015_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176126
NZ_CP040391.1\|WP_002923205.1\|41828_43022_+\|purine-ribonucleoside-efflux-pump-NepI	unknown	unknown	gnl\|CDD\|182309
NZ_CP040391.1\|WP_002923203.1\|43018_43828_-\|phosphonoacetaldehyde-hydrolase	unknown	unknown	gnl\|CDD\|184075

Protein	Function_ID	Function_description	E-value
NZ_CP040391.1\|WP_002923153.1\|55145_56516_+\|aromatic-acid/H+-symport-family-MFS-transporter	gnl\|CDD\|273327	TIGR00895, transport_protein, benzoate transport. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	1.33321e-113
NZ_CP040391.1\|WP_002923158.1\|51650_51953_-\|PTS-lactose/cellobiose-transporter-subunit-IIA	gnl\|CDD\|376749	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The lactose/cellobiose-specific family are one of four structurally and functionally distinct group IIA PTS system enzymes. This family of proteins normally function as a homotrimer, stabilized by a centrally located metal ion. Separation into subunits is thought to occur after phosphorylation.	4.10554e-33
NZ_CP040391.1\|WP_002923201.1\|43837_44941_-\|2-aminoethylphosphonate--pyruvate-transaminase	gnl\|CDD\|184076	PRK13479, PRK13479, 2-aminoethylphosphonate--pyruvate transaminase; Provisional.	0
NZ_CP040391.1\|WP_004151518.1\|41258_41618_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368831	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system. RelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, pfam04221.	7.06776e-54
NZ_CP040391.1\|WP_002923193.1\|46999_48112_+\|2-aminoethylphosphonate-ABC-transport-system-ATP-binding-subunit-PhnT	gnl\|CDD\|132302	TIGR03258, PhnT, 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.	0
NZ_CP040391.1\|WP_002923240.1\|40951_41275_-\|DNA-binding-transcriptional-regulator	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	4.16728e-46
NZ_CP040391.1\|WP_002923191.1\|48111_48972_+\|2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274484	TIGR03226, PhnU, 2-aminoethylphosphonate ABC transporter, permease protein. This ABC transporter permease (membrane-spanning) component is found in a region of the salmonella typhimurium LT2 genome responsible for the catabolism of 2-aminoethylphosphonate via the phnWX pathway (GenProp0238).	3.37211e-138
NZ_CP040391.1\|WP_002923278.1\|40369_40822_+\|DUF1198-family-protein	gnl\|CDD\|369048	pfam06711, DUF1198, Protein of unknown function (DUF1198). This family consists of several bacterial proteins of around 150 residues in length which are specific to Escherichia coli, Salmonella species and Yersinia pestis. The function of this family is unknown.	1.33042e-84
NZ_CP040391.1\|WP_002923196.1\|45082_45802_+\|phosphonate-utilization-transcriptional-regulator-PhnR	gnl\|CDD\|132380	TIGR03337, phnR, phosphonate utilization transcriptional regulator PhnR. This family of proteins are members of the GntR family (pfam00392) containing an N-terminal helix-turn-helix (HTH) motif. This clade is found adjacent to or inside of operons for the degradation of 2-aminoethylphosphonate (AEP) in Salmonella, Vibrio Aeromonas hydrophila, Hahella chejuensis and Psychromonas ingrahamii. [Regulatory functions, DNA interactions].	4.17316e-135
NZ_CP040391.1\|WP_002923146.1\|59142_59883_+\|4-oxalmesaconate-hydratase	gnl\|CDD\|225031	COG2120, COG2120, Uncharacterized proteins, LmbE homologs [Function unknown].	4.16819e-50
NZ_CP040391.1\|WP_002923155.1\|53384_53699_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99906	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In these systems, EII is either a lichenan- or an N,N-diacetylchitobiose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. In the chitobiose system, these subunits are expressed as separate proteins from chbA, chbB, and chbC of the chb operon (formerly the cel (cellulose) operon). In the lichenan system, these subunits are expressed from licA, licB, and licC of the lic operon. The lic operon of Bacillus subtilis is required for the transport and degradation of oligomeric beta-glucosides, which are produced by extracellular enzymes on substrates such as lichenan or barley glucan. The lic operon is transcribed from a gammaA-dependent promoter and is inducible by lichenan, lichenan hydrolysate, and cellobiose. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include chitobiose/lichenan, ascorbate, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	2.87298e-39
NZ_CP040391.1\|WP_002923152.1\|56529_57792_+\|gallate-dioxygenase	gnl\|CDD\|184006	PRK13367, PRK13367, gallate dioxygenase.	0
NZ_CP040391.1\|WP_002923156.1\|52050_53373_-\|PTS-cellobiose-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	4.08028e-135
NZ_CP040391.1\|WP_002923144.1\|59879_60593_+\|4-carboxy-4-hydroxy-2-oxoadipate-aldolase/oxaloacetate-decarboxylase	gnl\|CDD\|181735	PRK09262, PRK09262, hypothetical protein; Provisional.	3.08643e-145
NZ_CP040391.1\|WP_004151517.1\|50126_51506_-\|carbohydrate-porin	gnl\|CDD\|367007	pfam02264, LamB, LamB porin. Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.	5.70015e-88
NZ_CP040391.1\|WP_002923195.1\|45980_46994_+\|2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|237887	PRK15046, PRK15046, 2-aminoethylphosphonate ABC transporter substrate-binding protein; Provisional.	0
NZ_CP040391.1\|WP_002923154.1\|53992_54934_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.48959e-48
NZ_CP040391.1\|WP_002923147.1\|57788_59015_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176126	cd08435, PBP2_GbpR, The C-terminal substrate binding domain of galactose-binding protein regulator contains the type 2 periplasmic binding fold. Galactose-binding protein regulator (GbpR), a member of the LysR family of bacterial transcriptional regulators, regulates the expression of chromosomal virulence gene chvE. The chvE gene is involved in the uptake of specific sugars, in chemotaxis to these sugars, and in the VirA-VirG two-component signal transduction system. In the presence of an inducing sugar such as L-arabinose, D-fucose, or D-galactose, GbpR activates chvE expression, while in the absence of an inducing sugar, GbpR represses expression. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.05999e-52
NZ_CP040391.1\|WP_002923205.1\|41828_43022_+\|purine-ribonucleoside-efflux-pump-NepI	gnl\|CDD\|182309	PRK10213, nepI, purine ribonucleoside efflux pump NepI.	0
NZ_CP040391.1\|WP_002923203.1\|43018_43828_-\|phosphonoacetaldehyde-hydrolase	gnl\|CDD\|184075	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional.	9.27278e-165

>NZ_CP040391.1|WP_002923191.1|48111_48972_+|2-aminoethylphosphonate-ABC-transporter-permease-subunit
MAQTLTLARPARNLRPYLWLALPLLVLATLFFYPLLLIAEQALRDASGNLSLETFWQVIDSKRFIGALLNTLQIAVFATLGCLVLGSVLALILVFIPFPGSQLVSRVIDTFIALPTFLITLAFTFIYGSAGLLNGTLMALFAFELPPVDFLYSINGVILAEITVFTPLVMRPLMAGLRQIDKSQLEAASILGAHPLRVITQVIFPAALPALMAGGSLCLLLTTNEFGIVLFIGAKGVNTLPMMVYSKAILESDYSVACMIALINILLSLGLFMLYRLAAARTGVRS
>NZ_CP040391.1|WP_002923193.1|46999_48112_+|2-aminoethylphosphonate-ABC-transport-system-ATP-binding-subunit-PhnT
MLMKATVTSSPSLAGTSGITLDSLRVSYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAIAGFVQPAGGRILIGDTDVTQLPPYKRGLAMVVQNYALFPHMKVEDNVAFGLRAQKQSRGLIAERVTEALKIVGMADYATRYPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEEIARLHRELPELTILYVTHDQTEALTLADKIGIMKDGSLIAHGETHELYHYPPNRFSAEFLGRANILQATALKDSPEPGLVSVSCGGGLINAFSRGGLHGNNKLLCIRPQHMSLAPRSATSNRLNATLTSVHWQGDLTHLLCDVAGEAVRIVMTHVNPLPRAGDKLALYFEPGDAVLIEVQ
>NZ_CP040391.1|WP_002923195.1|45980_46994_+|2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MKLSRFALLSLFALTSSPVWADGVVTVYSADGLHDGDNSWYQSQFAAFTKATGIKVQYVEGGSGAIVERLAKERTNPQADVLVTVPPFIQRAAKEQLLATFTPQGSAQIPGANDRYAPLVNNYLTFIYNSQLLKSAPASWQDLLDSRYKNKLQYSTPGQAGDGTAVMLQAFHSLGGKDAGFAYLGKLQANNVGPSASTGKLTALVNKGELYVANGDLQMNLSQMARNPNVKIFWPADDKGERSALALPYTIGLVQNGPNSENGKKLINFLLDKPAQSSVSARSWGLPVRSDVAPDDANFKAAKAALDGVKSWEPNWDDVAVSLSADIARWHKVTDSE
>NZ_CP040391.1|WP_002923196.1|45082_45802_+|phosphonate-utilization-transcriptional-regulator-PhnR
MKSPSGEMPQYLMIKAQLQARIQNGALKSGDKLPSERELCALFNTTRITVRESLAQLEASGVIYRADRRGWFVTPERLWLDPTQNTNFHKLCLEQGREPKTVLLDGRLAAVPLDVMAPLALQPFDQVYLLTRLRYADGRPVCYCENHCLPARVPELLRHDLNGSLTEIYQTHYELIYTSMHLSFYPTSMPPQAAEALGVMEGRPALLLRRLNYDQHGRILDYDIEYWRHDSLRIEVDTH
>NZ_CP040391.1|WP_002923201.1|43837_44941_-|2-aminoethylphosphonate--pyruvate-transaminase
MTSRNYLLLTPGPLTTTRTVKEAMLFDSCTWDDDYNLGVVQTIRQQLVQLATPADGYTAVLLQGSGSYAVEAVLGSVIGEQGKVLIVSNGAYGARMIEMAQLMGIACHPYDCGEVSRPDAAAIEQILQNDPAITHIAMVHSETTTGMLNPIEEVAELAKRYDKRYIVDAMSSFGGIPLDIAALNIDYLISSANKCIQGVPGFAFVIAREAELAACKGRSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAQEGGVSARYQRYRNNQRRLVAGMRALGFRPLLDDSLHSPIITAFYSPDAPQYRFHTFYQKLKDQGFVIYPGKVSQSDCFRIGNIGEVYDADITALLAAIDNAMYWKQ
>NZ_CP040391.1|WP_002923203.1|43018_43828_-|phosphonoacetaldehyde-hydrolase
MNRISALILDWAGTTVDFGSFAPTQIFVEAFRQAFDIEITLEEARVPMGLGKWQHIEALGKLPSVDSRWQAKFGRAMTAADIDAIYAAFMPLQIAKVVDFSAPIAGVVDTIATFRAEGLKIGSCSGYPRPVMEKLVPAAAAQGYAPDHWVATDDLAAGGRPGPWMALQNVITLGIDDVAHCVKVDDAAPGISEGLHAGMWSVGLAVSGNEFGATWEEYQAMSKAEIATRRERAAGKLYAAGAHYVVDTLADLPEVIADINARLAKGERP
>NZ_CP040391.1|WP_002923205.1|41828_43022_+|purine-ribonucleoside-efflux-pump-NepI
MSHSNETKPHARDLARPNWSAVFAVAFCVACLITVEFLPVSLLTPMALDLGISEGMAGQSVTTTAFVAMFSSLFITTVIGKTDRRYVVILFSLLLTLSCLLVSFADSFTLLLLGRACLGLALGGFWAMSASLTMRLVPMRVVPKALSIIFGAVSIALVIAAPLGSFLGGLIGWRNVFNGAAVMGVLCTLWVLKALPSLPGESASQQQNMFGLLKRPGVMAGMCAIFMAFAGQFAFFTYIRPVYMTLAGFDVDGLTLVLLSFGIASFIGTSLSSVLLKRSVKAALAIAPLVLTACAVALVLWGESKIIASTVAIIWGFAFALIPVGWSTWITRSLSDQAEKAGSIQVAVIQLANTCGAAVGGIALDHLGLLSPLVLSGILMLFTGLLVAAKVKVNSPA
>NZ_CP040391.1|WP_004151518.1|41258_41618_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MRIFKTKWFAREASSHGISDDELYQAIQSALQGKVVDLGGGVYKKRLNKNRDRAIILTKSAEYWFYTFLYAKQDMANINHRELMGFRELAKHYANLSEEKTTVLVKSKELVEICDDSKK
>NZ_CP040391.1|WP_002923240.1|40951_41275_-|DNA-binding-transcriptional-regulator
MTAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVATLQPIEIKALREQLNVSQPVFARYLNTSVSTVQKWETGAKRPSGMSLKLLSVVQKHGLKILL
>NZ_CP040391.1|WP_002923278.1|40369_40822_+|DUF1198-family-protein
MIWIGLATLVVVFVVGFRVLTSDSRRAIRRLSERLGITPVPLESMIDQLGKTAGNEYLRYLERPNEAHLQNAAQVLLIWQVAIVDASEKNLHYWYRLMQKARLAAPITEAQIRLAQGFLRELDPDVSDLHNLQQRYNDLFLPEDGVHWLH
>NZ_CP040391.1|WP_004151517.1|50126_51506_-|carbohydrate-porin
MNTVKKLPLAMAVVAALCPISVMAQEFTQEQIDAIVAKAVDKALADRQAKIDAAANKKVDVITNPETTAASPDMAIPFGLKFSGYARYGAHFQTGDQKYVGVDGSYNGASAIGRLGNESNGGEFQISKAFKSAQGAIWDLNVMFDHWSDEVNLKKAYVGVTNVLESNPNAYLWAGRDFHQRPQQGINDYFWMNHDGQGAGVKNFDIGGVQFDVAAVSQVKSCSPEVMADETNPSRITCTGSSDTGDNGHYALTTKTHNIKAGPIDVEVYANYGFDSKAVDSDARLEAWQGGLVLSHTNDSGVNKVILRYSDNSDNSVYNKTDDLTTVYASFEGSHKFTQQAQVEYLLAFHDYDNGKDNTDNRKNYGAIVRPMYFWNDVHSTWLEAGYQRVDYDQGGDNHGWKLTLSQNIAIGMGPEFRPMLRFYVTGGQVDNEHTAKVNGTQDQQLDSLNVGGMFEAWF
>NZ_CP040391.1|WP_002923158.1|51650_51953_-|PTS-lactose/cellobiose-transporter-subunit-IIA
MIELEDAVMEIIVNAGQSRSLCFEALHAARTGNIDEARLLLNEADGYARRAHQMQTQLIGQDAGEARQPMTLIMVHAQDHLMNSLLAREFSEELIHLYQR
>NZ_CP040391.1|WP_002923156.1|52050_53373_-|PTS-cellobiose-transporter-subunit-IIC
MSSLYQSMIAVIEQSITPLAGRLGQQKYVIAIRDGFTAALPFMIIGSFMLVFIFPPFSPDTTNGFARGWLDFSQHYREQLMLPFNLSMGVMTFFISVGIGASLGRQFQLDPVMSGLLAFMAFLLVAAPYADGKISTQYLSGQGIFTALITAIYSTRVYAWLKQNNITIRLPKEVPTGVARSFEILIPVLVVIATLHPLNLFIEAQTGMILPQAIMHLLEPLVSASDSLPAILLSVLMCQIFWFAGIHGSLIVTGIMNPFWMANLSANQAALAAGTVLPHVYLQGFWDHYLLIGGVGSTLPLAFLLLRSRATHLRTIGKMGIVPSFFNINEPILFGAPIIMNPMMFIPFVCVPMVNAVLAYGATRLGWLSQVVSLTPWTTPAPIGASWAANWTLSPVVMCLICMVMSAVIYLPFLRAYERSLMKTEVEKAKNSVPVAETVS
>NZ_CP040391.1|WP_002923155.1|53384_53699_-|PTS-sugar-transporter-subunit-IIB
MYKIMLCCSVGMSTSLLVRKMVEAANERDLPVQIDAYGVSEFDMQFPQYQVVLLGPQVKYMLKTLSDKAASLNIPVQPIDTMDYGMQRGDNVLNYALSLIPAAH
>NZ_CP040391.1|WP_002923154.1|53992_54934_+|LacI-family-transcriptional-regulator
MSTINDVSRLAGVSKATVSRVLSGSRGVKEASRQAVLQAAEALNYRPNMIAQSLLSQSTGCIGVICAQDNINQTTSYLYALEKQLSQHQKHLLLRFANTSHGVMNSLEELTCGLCDNVLIIGARFPLNINRPDVVLVDCLDSEGDNSIQFDHAFAAETACHYLISQGRRQIALIHPQSSGFADQVLLGYKHALEKNFLPFNRNLVFLDNTSPSVAVQELVNNATTLNFNALLVSDEQQAQRVVPQLQAFNRAVPQNVMVFSLAGSLQLPGIPTIPAIEYSMDAMASRIVNWLTEKTDNPGGSPLRGDLIIPKH
>NZ_CP040391.1|WP_002923153.1|55145_56516_+|aromatic-acid/H+-symport-family-MFS-transporter
MNHTNVVDVKAWIDTRPVSRFQWNVLLLCFIIIMLDGYDAAVMGFVAPALIEDWGISRAEMGPILGAAMFGVAIGALVAGPLSDRYGRKRILLWSVALFALFSLAGAVAQSPTQLALMRFLTGLGLGAVMPNCVTLVAEYMPERRKGVMITLMYSGFNVGSGLGGFIAAGLLSHYSWHSALVFGGVLPLVVLPFMIVMLPESAMNMVARRLPGEQIARALNRLGGQFTAETVFQLNAPPITRSSKVAQLFRHGYARGTIALWLTYFMGLFVIYLLNGWLPTILRSGGLSLQQAAMMTGLFQLGGPLGGILVGMLMDRASAKAVIAATYFLGCLCLLSQGVMDFGSAALSVLIFISGMCINGAQNGLQAYSPAYYQTEIRATGVSWMHGIGRTGAILSSTLGGMLMLAVPGHSSIFLVLALPACLAGICILLHRMNHAKPRLTEAELDALSSPLEHR
>NZ_CP040391.1|WP_002923152.1|56529_57792_+|gallate-dioxygenase
MANILGGIAVSHTPTIGFAVDHHKQQDPAWAPIFQSFEPLQRWLEEKKPDALVYIFNDHVTAFFFDHYSTFTLGIDSQYDVADEGGGPRCLPPVQGNAALSRHIGASLMADEFDMSFFMDKKLDHGLFSPLSALLPWDEAQGWPTAVIPLQIGVLQFPVPSARRCYKLGQALRRAIESFPEDINVAIVATGGLSHQVHGERCGFNNPDWDAQFVDMLVNDPEKLTEMTLGEYAELGGMEGSEVIMWLVMRGALSANVTETWRDYYLPSMTGIATLILENNARLPPVDTLTRHRQHMAQQLAGVEKLPGTYPFTHERSLNGLRLNRFLHRLIEPAWRERFLQSPQSLYAEAGLSEEEQQLLNARDWRGLIQYGASFFLLEKMGAVVGVSNLHIYAAMRGQTLEAFQQTRNQQVTYSVAGKR
>NZ_CP040391.1|WP_002923147.1|57788_59015_-|LysR-family-transcriptional-regulator
MLKRKHDKIINIMQLRFFCQVALRGSVSRAADDLFRTQSAITRAIRDLEAALNVTLFERHYSGMVPTEYGKCILPRARRAIDDLQAIPALLQKHHTRSSGPLADAGWLFNTRRLAIFIQLYHVNHTQTVAQQLGITQPAVSAALKVLEKGADSALFRRTPEGVRPTPAAELLYPPVSRALNELENIWSDLAARRGVLEGTVRIGALPLSRTRLLPSAIAAFLAQHPGITLMTNESPYESLVADMRAGNIDFIIGALRQDEDLPDLCSEALFEEDMLILLRNNHPLLRHPDPRSQLATAQWVLPRANAPARNLLDKAFVTLGLPLPQPTVETGDAAMVRGLLQGSDMLAAVSASQMRFETDNGLLSVLPVPLPDTTRRIGLTFRAGSLPSPATQALLRFIYQQVQDGAV
>NZ_CP040391.1|WP_002923146.1|59142_59883_+|4-oxalmesaconate-hydratase
MSHPVSEKSALVVSAHSADFVWRAGGAIALHALQGYQVHVVCLSFGERGESAKLWRKGNMTEEAVKQVRREEAQAAAAILGASVEFFDIGDYPLRADKETLFRLADVYRRIQPHFVLTHSLHDPYNYDHPLASHLAQEARIIAQAEGYRPGEKIVAAPPVYCFEPHQPEQCNWKPDVLLDITAVWEKKYQAIQCMQGQEHLWEYYTRVALQRGVQAKRNIGITAARDIVHGEAFQSIFPRVTENLA
>NZ_CP040391.1|WP_002923144.1|59879_60593_+|4-carboxy-4-hydroxy-2-oxoadipate-aldolase/oxaloacetate-decarboxylase
MNLINKKGLVIRHLPRHDEAVLRRCEAAGVATLHEAWDRQGLMGPAIRPIQQGVSRAGNAVTVLVTPGDNWMFHVAVEQCRAGDILVVAPTSPCGDGFFGDLLATSLQSRGVVGLVGDIGIRDSQTLREMGFAVWSRQVYAQGTVKESLGSVNVPVICAGQLVQPGDVVVADDDGVVVLPHARVRDVLHKAEARMSNELAKRERMRNGELGLDIYAMRPRLAEKGLRYYDRADEVEE

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Crispr_ID: NZ_CP040391_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040391_2

1796655-1796810

Orphan

Consensus_repeat	Method
ATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040391_2

>merge|NZ_CP040391|2|1796655-1796810|CRISPRCasFinder
ATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCAGTGTGGCGGCTACGCCTGACCCGGTCTGGATTATACGGTGGGTGTCATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCA

>NZ_CP040391|2|2|1796655-1796810|CRISPRCasFinder
ATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCA	GTGTGGCGGCTACGCCTGACCCGGTCTGGATTATACGGTGGGTGTC
ATACCCCGATTAGTTCGCCATCCCGTAGGCCTGATAAGCGAAGCGCCATCAGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040391.1\|WP_002912442.1\|1793247_1793889_+\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP040391.1\|WP_004213673.1\|1792284_1793133_+\|DNA-3-methyladenine-glycosylase-2	unknown	unknown	gnl\|CDD\|236671
NZ_CP040391.1\|WP_042943921.1\|1809164_1810076_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|224137
NZ_CP040391.1\|WP_134791189.1\|1804803_1805250_+\|protein-tyrosine-phosphatase	unknown	unknown	gnl\|CDD\|138553
NZ_CP040391.1\|WP_023307295.1\|1786827_1787439_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP040391.1\|WP_023284036.1\|1790794_1792147_-\|molecular-chaperone	unknown	unknown	gnl\|CDD\|236954
NZ_CP040391.1\|WP_042943925.1\|1803676_1804816_+\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|237903
NZ_CP040391.1\|WP_004151145.1\|1793979_1794561_+\|dCTP-deaminase	unknown	unknown	gnl\|CDD\|274062
NZ_CP040391.1\|WP_042943928.1\|1788648_1790505_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP040391.1\|WP_004184823.1\|1800508_1801138_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|214471
NZ_CP040391.1\|WP_004151139.1\|1785279_1786554_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220
NZ_CP040391.1\|WP_042943926.1\|1802097_1803531_+\|capsule-assembly-Wzi-family-protein	unknown	unknown	gnl\|CDD\|379441
NZ_CP040391.1\|WP_042943922.1\|1807670_1809098_+\|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP	unknown	unknown	gnl\|CDD\|185126
NZ_CP040391.1\|WP_023285359.1\|1787932_1788634_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP040391.1\|WP_049117695.1\|1810242_1811211_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133039
NZ_CP040391.1\|WP_023285356.1\|1794591_1796439_+\|outer-membrane-assembly-protein-AsmA	unknown	unknown	gnl\|CDD\|236772
NZ_CP040391.1\|WP_004151147.1\|1796876_1798460_-\|TerC-family-protein	unknown	unknown	gnl\|CDD\|223930
NZ_CP040391.1\|WP_042943923.1\|1805266_1807426_+\|polysaccharide-biosynthesis-tyrosine-autokinase	unknown	unknown	gnl\|CDD\|183173
NZ_CP040391.1\|WP_004146563.1\|1787554_1787695_-\|small-membrane-protein	unknown	unknown	unknown
NZ_CP040391.1\|WP_001741945.1\|1799225_1800116_+\|GalU-regulator-GalF	unknown	unknown	gnl\|CDD\|182252

Protein	Function_ID	Function_description	E-value
NZ_CP040391.1\|WP_002912442.1\|1793247_1793889_+\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	1.7406e-147
NZ_CP040391.1\|WP_004213673.1\|1792284_1793133_+\|DNA-3-methyladenine-glycosylase-2	gnl\|CDD\|236671	PRK10308, PRK10308, 3-methyl-adenine DNA glycosylase II; Provisional.	1.79995e-180
NZ_CP040391.1\|WP_042943921.1\|1809164_1810076_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|224137	COG1216, COG1216, Predicted glycosyltransferases [General function prediction only].	1.97955e-18
NZ_CP040391.1\|WP_134791189.1\|1804803_1805250_+\|protein-tyrosine-phosphatase	gnl\|CDD\|138553	PRK11391, etp, phosphotyrosine-protein phosphatase; Provisional.	9.16818e-67
NZ_CP040391.1\|WP_023307295.1\|1786827_1787439_-\|transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	0.00109955
NZ_CP040391.1\|WP_023284036.1\|1790794_1792147_-\|molecular-chaperone	gnl\|CDD\|236954	PRK11678, PRK11678, putative chaperone; Provisional.	0
NZ_CP040391.1\|WP_042943925.1\|1803676_1804816_+\|polysaccharide-export-protein	gnl\|CDD\|237903	PRK15078, PRK15078, polysaccharide export protein Wza; Provisional.	0
NZ_CP040391.1\|WP_042943928.1\|1788648_1790505_-\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.91943e-41
NZ_CP040391.1\|WP_004184823.1\|1800508_1801138_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|214471	smart00014, acidPPc, Acid phosphatase homologues.	1.70935e-16
NZ_CP040391.1\|WP_004151139.1\|1785279_1786554_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	4.74771e-108
NZ_CP040391.1\|WP_042943926.1\|1802097_1803531_+\|capsule-assembly-Wzi-family-protein	gnl\|CDD\|379441	pfam14052, Caps_assemb_Wzi, Capsule assembly protein Wzi. Many bacteria are covered in a layer of surface-associated polysaccharide called the capsule. These capsules can be divided into four groups depending upon the organisation of genes responsible for capsule assembly, the assembly pathway and regulation. This family plays a role in group 1 capsule biosynthesis. It is likely to be involved in the later stages of capsule assembly. It is likely to consist of a beta-barrel structure.	3.10149e-134
NZ_CP040391.1\|WP_042943922.1\|1807670_1809098_+\|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP	gnl\|CDD\|185126	PRK15204, PRK15204, undecaprenyl-phosphate galactose phosphotransferase; Provisional.	0
NZ_CP040391.1\|WP_023285359.1\|1787932_1788634_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.16867e-37
NZ_CP040391.1\|WP_049117695.1\|1810242_1811211_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.75363e-80
NZ_CP040391.1\|WP_023285356.1\|1794591_1796439_+\|outer-membrane-assembly-protein-AsmA	gnl\|CDD\|236772	PRK10833, PRK10833, putative assembly protein; Provisional.	0
NZ_CP040391.1\|WP_004151147.1\|1796876_1798460_-\|TerC-family-protein	gnl\|CDD\|223930	COG0861, TerC, Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism].	9.01248e-99
NZ_CP040391.1\|WP_042943923.1\|1805266_1807426_+\|polysaccharide-biosynthesis-tyrosine-autokinase	gnl\|CDD\|183173	PRK11519, PRK11519, tyrosine-protein kinase Wzc.	0
NZ_CP040391.1\|WP_004151145.1\|1793979_1794561_+\|dCTP-deaminase	gnl\|CDD\|274062	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	1.60713e-93
NZ_CP040391.1\|WP_001741945.1\|1799225_1800116_+\|GalU-regulator-GalF	gnl\|CDD\|182252	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF.	0

>NZ_CP040391.1|WP_023285356.1|1794591_1796439_+|outer-membrane-assembly-protein-AsmA
MRRILTTLMILLAVIVAGLTSLVLLVNPNDFRAYMVHEVAERSGYQLDLDGPLRWHVWPQLSILSGRMTLTARGAEEPVIRADNMRLDVALLPLLSHQLQVKQVMLKGAVIQLTPKTEAVRDSSAPVVPHDNTLPLAPEDRGWSYDVRQLQVADSVLFFQHENGEQVTVRDIRLQMEQDENHRATVDFSGRVNRDQRDLALNFSATVQGGDYPHSLKADFTQLSWQLRGAELPPDGINGQGSLQASWQEDDKTLRFDNLNLMANRSTVTGSGSVVLGDRPDWSLDLHATTLDLDSLLAQRSPATDSSASQQGQSQTRPLRPVIADSDEREDYQSLRGFNGRMALSADQLQWRGLNFTQVQSEISNQQGLLTVSKMQGNLDGGQLSLPGTLDARGDTPLATFQPALQNVEIGSLIKAFNYSLNLTGKLSLSGEFSGTRIDADDFRRHWQGQAQLQMADTRTEGLNFQQLVQQAVERSTNVRAQENYDNATRLDSVSSRLTLDNGLVTLNRLQGQSDVMAMTGEGQLDLQKENCDMRFNVRVLGGWKGEGKLIDRLKQTAIPLRIYGEWQSLSYSLQVDQILRKQLQDEAKQRLNDWVERNKGSNDGNDAKKLLDKL
>NZ_CP040391.1|WP_004151145.1|1793979_1794561_+|dCTP-deaminase
MRLCDRDIEAWLDEGRLAINPRPPVERINGATVDVRLGNKFRTFRGHTAPFIDLSGPKAEVSAALDRVMSEEIVLPEGEAFFLHPGELALAVTYESVTLPADLVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMPIGALSFEPLSGPAARPYNRREDAKYRDQQGAVASRIDKD
>NZ_CP040391.1|WP_002912442.1|1793247_1793889_+|uridine-kinase
MTDMSHQCVIVGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDSYYKDQSHLSMEERVKTNYDHPSSMDHSLLFQHLQMLKSGQPIELPVYSYVEHTRTPNTIHVEPKKVIILEGILLLTDARLRNELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>NZ_CP040391.1|WP_004213673.1|1792284_1793133_+|DNA-3-methyladenine-glycosylase-2
MVLLPWTPPYDWAWMVGFLQARAVAGVERFHDGGYSRSFGVEGHRGLIHLAPDEEAQGLRVTLSPGLQPVAEICYARIGQLFDLACDPRQVARTLGDLAQARPGLRLPGALDAFEQAVRAVLGQLVSVAMAARLTAKVAAGWGEPLAEAPGYVLFPTPEALSRADPQALKALGMPLRRAEALIHLARAALSGELPLTAPADIDAGLRQLQTLPGIGRWTANYFALRGWQAKDIFLPDDYLIKQRFPGMTPAAIARYARRWQPMRSYALLHIWYTDDWAPAAE
>NZ_CP040391.1|WP_023284036.1|1790794_1792147_-|molecular-chaperone
MFIGFDYGTANCSVAVMRENTPQLLTLENGSALLPSMLCAPTREAVSEWLYRHHDVPTHSDENQALLRRAIAANRDEDIEVLRNSVQFGLASLQQYVEDPQEVYFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIKLQAESQLPEQIDQAVIGRPINFQGLGGDEANAQAQGILERAAHRAGFRDVVFQFEPVAAGLDFEATLSEEKRVLVVDIGGGTTDCSLLLMGPQWRERADRQQSLLGHSGCRIGGNDLDIALAFKCLMPLLGMGGETEKGTALPILPWWNAVAINDVPAQSDFYSTANGRLLNDLLRSARDADKVALLLKVWRQRLSYRLVRSAEESKIALSSAASVETALPFIQDDLATAIAQQGLEAALDQPLTRIMEQVRLALDSSQTTPDVIYLTGGSARSPLIKKALAAQLPGIPLAGGDDFGSVTAGLARWAQVVFR
>NZ_CP040391.1|WP_042943928.1|1788648_1790505_-|sensor-histidine-kinase
MLLVAPQAQAATRQVGIDIPVQWYADDSGQMTLDRFAALPTDQLATTRQIPSFGYSRKTWWLRSELPGTWFAGEPRWLQLGPTFVDHLTIYYRPLGSDAPWAQRTFGDRDGARESDLHYRESVLILPPPLTAAGYEVVFRLQSTSTLILLASLSSPQEFVQRATADTAFWSFYFGLAAVACGVALWLALALRRRLLWGICLFSLNYPLVAALHGFPEWFFGHAALPFQDFMISSLSLFSYATALWLHSEIFDLKKNMPRLHQLLIAAVILNLVLQVSIPLGFYGFAMQIEGVVFIIITPVLLFTSWWLWRKKAIDRTTLLLGLLPPFYVVAAVLVQLSIHGIIPFHMAIYSLWQYALIVHIITVLIIAILRVRAENRQLEQKQRLARELQIEREASFHQRQFMGMVAHEFRTPLAVIQAALENLRLSAASTSQEVRFDRIGRAATRLVQLTDNCLADARLASHDLHVERQQTALLTVINMAASVVAISHDHYLNIRQHGEVESPQLQADAGLLCIAIANLLDNAVKYSPPGEIAIDIHSDAGQTELRIRDHGPGLPAGQAELIFERYRRGEHTSPVPGGTGLGLYVARQIVQAHDGKLWLAEHGPDGCTFILTLPTVA
>NZ_CP040391.1|WP_023285359.1|1787932_1788634_-|response-regulator-transcription-factor
MALRLAIIEDNADLLDELLAWLGYRGFEVWGTRSAEAFWRQLHSHPVDIVLVDIGLPGEDGFSVLNYLHELGHYGLVVVSARGQQQDKLQALSLGADAYLIKPVNFAHLAETLTALGARLRQNRPAAPPAEAIGTPPAVSPGSWRLQEDKLISPDARTLELTQQEYRLVELLMRNRNEVCSKLDLHACLFSHESEPDLHRIDVVVSRLRHKARQQGIHLPVRAIFGKGLAFIS
>NZ_CP040391.1|WP_004146563.1|1787554_1787695_-|small-membrane-protein
MAMQTWLVLLLCIFFFSISVYSFISYLKDRRRQKFTFNDKRSMRRK
>NZ_CP040391.1|WP_023307295.1|1786827_1787439_-|transcriptional-regulator
MRNINVTINTRNAFVRESLVAMVNDLTRGDLRARFSWRNTDLSAEDIIICEVIPGEIYLCNTLIKNRKRGSSLIILHSYDQLPEDEFMINCLKGVIFVSLKTASIPRLLTIIKSELQHCMTPTATDAAGRELSCASCPHRVLSRSQTAVAHGILEGLDMSKIAALQRVSPRTAAYHKNKIMEKYSLNNNHEFFQFMNLLRERW
>NZ_CP040391.1|WP_004151139.1|1785279_1786554_+|dicarboxylate/amino-acid:cation-symporter
MANANKLTLFIVVFMLMGILSGAAIHAYATPTTVSAWADNITLLTDLFLRLIKMVIAPLVFSTLTVGIMRLGETATIGRVGGKAMVWFITSSVLSILVGLVIVTFQHPGAGLNLAVPKEAVDTGLAVSGMSLKGFLSHTIPTSITEAMANNEILQIVVFSMFFGIAGASLGEKFNAPLVAALNVVSHIMLKVTGYVMYVAPLAIFAAISSVIASQGLGILLNYASFIGGYYLAVLLTSAVLIAVGYMVLKKEVFRLLNMLKDPVLVAFTTSSSEAAYPKTLERLVKFGCSRNIVSFVLPIGYSFNLVGSMVYCSFAAMFIAQAYNVPLSFSEITVMMLTLMLASKGIAGVPRSALVVLAATIPSFNIPVAGILLLMGIDHFLDMGRSAINVLGNGIATAMLSKNEGLLTDEEAQPDWEVEKAEA
>NZ_CP040391.1|WP_004151147.1|1796876_1798460_-|TerC-family-protein
MEWIADPSIWAGLVTLVVIELVLGIDNLVFIAILAEKLPPAQRDRARITGLMLAMVMRLLLLASISWLVTLTKPLIVFHDFSFSARDLIMLFGGLFLLFKATVELNERLEGKDSDNPTQRKGAKFWAVVAQIVVLDAIFSLDSVITAVGMVDHLAVMMAAVVIAISLMLMASKALTRFVNSHPTIVILCLSFLLMIGFSLIAEGFSFIIPKGYLYAAIGFSVMIEALNQLAQFNRRRFLSANMTLRQRTTEAVMNLLSGQKEKAELDADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEPLDLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNGHMPLEDLVQYVPLPLDDKREYHTVAGLLMEYLQHVPQVGETIEIDGYTLRTLQVDSHRVQKVQIVPPVKQDELDYEV
>NZ_CP040391.1|WP_001741945.1|1799225_1800116_+|GalU-regulator-GalF
MANLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEIVAAGIKEIVLVTHSSKNAVENHFDTSYELEALLEQRVKRQLLAEVQAICPPGVTIMNVRQAQPLGLGHSILCARPVVGDNPFVVVLPDIILDGGTADPLRYNLAAMIARFNETGRSQVLAKRMPGDLSEYSVIQTKEPMVAEGQVARIVEFIEKPDEPQTLDSDLMAVGRYVLSADIWAELERTEPGAWGRIQLTDAIAELAKKQSVDAMLMTGESYDCGKKMGYMQAFVTYGMRNLKEGAKFRESIKKLLA
>NZ_CP040391.1|WP_004184823.1|1800508_1801138_+|phosphatase-PAP2-family-protein
MNWQLISFFGDSTVLLPSAAALFIVLMLRKTSRLLAWQWSLLFGITGAIVCASKLAFMGWGLGIRELDYTGFSGHSALSAAFWPIFLWLLSARFSVGLRKAAVITGYVLAAVVGYSRLVIHAHSVSEVIAGLLLGAAGSALFLVLQKRTPDPESVNISWGGVACLVMVPLILLHSGSKAPTQSLLGQIATAVGPLDKPFTRTDLHKQAW
>NZ_CP040391.1|WP_042943926.1|1802097_1803531_+|capsule-assembly-Wzi-family-protein
MIKIARIAVTLGLLSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEIARALKKAKPSYSSEQVVLARINQRLSALKADFRVTGYTSTDQPGTPQGFGQTQPADNSLGLAFNNSGEWWDVHLQGNVEGGERISNGSRFNANGAYGAVKFWNQWLSFGQVPQWWGPGYEGSLIRGDAMRPMTGFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYTAVPHAKIIGGRFTFTPFQSLELGASRIMQWGGEGRPQSFSSFWDGFTGKDNTGTDNEPGNQLAGFDFKFKLEPTLGWPVSFYGQMIGEDESGYLPSANMFLGGVEGHHGWGKDAVNWYLEAHDTRTNMSRTNYSYNHHIYKDGYYQQGYPLGDAMGGDGQLIAGKIELITEDNQRWSTRLVYAKVNPENQSINKAFPHADTLKGVQLGWSGDVYQSVRLNTSLWYTNANNSDSDDVGASAGIEIPFSL
>NZ_CP040391.1|WP_042943925.1|1803676_1804816_+|polysaccharide-export-protein
MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLLRSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVQVAGKTLAQVRQDIASRLTTYIESPQVDVSVAAFRSQKAYVTGEVEKSGQQPITNIPLTVMDAINAAGGLSENADWRNVVLTHNGKDTKISLYALMQKGDLTENRLLYPGDILFVPRNDDLKVFVMGEVGKQSTMKMDRSGMTLAEALGNAEGISQSMSDATGIFVIRQIKSDKQGKIANVYQLNAQDASAMVLGTEFQLQPYDIVYVTTAPLVRWNRVISQLVPTITGVHDMTETVRYIKRWPN
>NZ_CP040391.1|WP_134791189.1|1804803_1805250_+|protein-tyrosine-phosphatase
MAKLMFDSILVVCTGNICRSPIGERYLQKLLPDKKIASAGVGALKNHNADENAVNIALKHDLSLDGHKGKQFTASLARQFDLILAMEKSHIEQISRIAPEVRGKTMLFGQWIGMRDIPDPYQKSEEAFASVYDLIEQASKRWAEKLGA
>NZ_CP040391.1|WP_042943923.1|1805266_1807426_+|polysaccharide-biosynthesis-tyrosine-autokinase
MIVNKKFSEKHSDEIDLGRIFGELIDHRKLIVSITALFTLFSLVYALFATPVYQADAMIQVEQKQGNAILNNLSQMLPDSQPQSAPEVALLQSRMILGKTVDDLNLQTRVTKKYFPLVGAGWARLTGEKESTISVSRFYVSSNSDDNEINAKITIVDPTHYIFSGNGFELKGTVGELIDGNGVSIKIDSIDASVGTTFNISLVTRLKAITDLQKMFAVSDQGKDTGILTLTVTGENPVLIRKILDSISENYLAQNIARQAAQDQKSLDFLNQQLPKVRDDLDNAEGKLNAYRRQNDSVDLSLEAKSVLDQIVNVDNQLNELTFRESEISQLYTKEHPTYKALLEKRKTLQDERSKLNKRVSGMPETQQVILRLSRDVESGRAVYMQLLNRQQELNIAKSSAIGNVRIIDPAVTQPKAVKPKKTLIVLIGTILGGMVSIGLILLRVFLRRGIESPEQLEDIGINVYASVPVAETFSKSAQKSKKWSRKAETAKGLLAIDNPADLAIEAIRGLRTSLHFAMMEARNNVLMISGASPNAGKTFVSTNLAAVIAQSGKRVLVVDTDMRKGYTHKLFDLDNSSGLSDFLSGKVEINKVVKPTAIVGMDLITRGMVPPNPAELLMHKRFEDLISWAGKNYDIVILDTPPVLAVTDAAIIGRYAGTTLLVARFELNTAKEIEVSVKRFEHSGITTKGCILNGVVKKASSYYGYGYNHYGYSYKEEK
>NZ_CP040391.1|WP_042943922.1|1807670_1809098_+|undecaprenyl-phosphate-galactose-phosphotransferase-WbaP
MTLLGRNFLVSMMLAFSDFISFTASIYIAMGLLYITVSNYGLIVPSSQIEGWVVLHWLLAFCCVGWYGIRLRHYFYRKTFWFELKEILRTLVIFAIIEIAVITFATWTFSRYLWIVTWFFVLLLVPVARMLMKRILHVFNYWQRDTWIVGSGDNACEAYKAISSERNLGLNIVGFIASEGGIEAGKKINGILVLKNDINWLLTKDKKTQFIVAVESHQSEMRNTWLRNFMIKGFRYVSVIPTLRGMPLDSTDMSFIFSHEVMIFRVQQNLAKWSSRILKRLFDIIGSIFIIIILSPALLYISRKVKKDGGPAIYGHERIGKGGRPFKCLKFRSMVINSKEVLEELLICDPKARQEWNATFKLKNDPRITKIGAFLRRTSLDELPQLFNVLKGDMSLVGPRPIITAELERYNDEVDYYLLSKPGMTGLWQVSGRSDVDYETRVYLDAWYVKNWSMWNDIAILFKTISVVLRKDGAY
>NZ_CP040391.1|WP_042943921.1|1809164_1810076_+|glycosyltransferase-family-2-protein
MRYFVAIPTYNGGEVWKTAVDKIREYSPSDLYVRVIDSSSKDDTVAVAKKAGFDVTVISSNDFNHGGTRNLAVEDQINNYDIIIFLTQDTIPEPDFIEKITVAFRDPQIACAYGRQLPHHNATPIAQHARYFNYPASGHVCDLQDATRLGIKTVFMSNSFSAYRIAAFKDLGGFPSNTILCEDMYFTAQAVLSGYKVAYVADAVVRHSHNYSPLEEFKRYFDIGVFHTDEPWIKEHFGGASGEGKKFILSELRYLLENGVHYIPIAFINNFMKIVGYKLGQKYKKIPISLVKYCSMHKRFWIV
>NZ_CP040391.1|WP_049117695.1|1810242_1811211_+|glycosyltransferase-family-2-protein
MEKVDVILASYNGDKYIAEQIRSILSNFDKLAGYDCRLLISDDSSNDNTIEVINTFVENDERITIVNMQKKGGVKENFYHLIVKTDADYVFFSDQDDFWLPDKMRIFLERFKILENDHTADVKKPILIHSDLCVADNVLSPVHRSMFSYQKLNKNPTFAELLVSNSVTGCVMACNKSLIEIAKKNNLTNAIMHDWYIGLLASCYGQIDFIDKPMILYRQHDNNQVGAKEFTLNALLSVENVISILRKAKQSVRKTKEQAELFLFNNSSIMTNERKILESYISSFNKTYLARAKLFFTGGIRKNGFLRNLMFFFIYVFVRLKD

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Crispr_ID: NZ_CP040391_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP040391_3

4569130-4569224

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP040391_3

>merge|NZ_CP040391|3|4569130-4569224|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP040391|3|3|4569130-4569224|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP040391.1\|WP_002888349.1\|4560759_4563117_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP040391.1\|WP_002888332.1\|4571711_4572539_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP040391.1\|WP_002888340.1\|4569365_4570991_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP040391.1\|WP_002888357.1\|4558248_4559751_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP040391.1\|WP_002888321.1\|4578669_4579518_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP040391.1\|WP_002888353.1\|4559888_4560584_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP040391.1\|WP_002888348.1\|4566223_4566883_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP040391.1\|WP_002888323.1\|4578287_4578665_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP040391.1\|WP_004151368.1\|4563304_4566211_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP040391.1\|WP_002888320.1\|4579773_4580253_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP040391.1\|WP_002888329.1\|4575185_4576472_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP040391.1\|WP_002888373.1\|4554449_4555217_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP040391.1\|WP_002888324.1\|4577463_4578285_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP040391.1\|WP_004147026.1\|4572782_4575131_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP040391.1\|WP_002888368.1\|4556528_4558238_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP040391.1\|WP_002888337.1\|4570980_4571679_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP040391.1\|WP_002888347.1\|4566957_4567497_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP040391.1\|WP_002888345.1\|4567676_4569041_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP040391.1\|WP_002888370.1\|4555345_4556191_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP040391.1\|WP_002888327.1\|4576477_4577467_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696

Protein	Function_ID	Function_description	E-value
NZ_CP040391.1\|WP_002888349.1\|4560759_4563117_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP040391.1\|WP_002888332.1\|4571711_4572539_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP040391.1\|WP_002888340.1\|4569365_4570991_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	6.55037e-173
NZ_CP040391.1\|WP_002888357.1\|4558248_4559751_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP040391.1\|WP_002888321.1\|4578669_4579518_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP040391.1\|WP_002888353.1\|4559888_4560584_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP040391.1\|WP_002888348.1\|4566223_4566883_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	2.4454e-161
NZ_CP040391.1\|WP_002888323.1\|4578287_4578665_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP040391.1\|WP_004151368.1\|4563304_4566211_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP040391.1\|WP_002888320.1\|4579773_4580253_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP040391.1\|WP_002888329.1\|4575185_4576472_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP040391.1\|WP_002888373.1\|4554449_4555217_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP040391.1\|WP_002888324.1\|4577463_4578285_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP040391.1\|WP_004147026.1\|4572782_4575131_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP040391.1\|WP_002888368.1\|4556528_4558238_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP040391.1\|WP_002888337.1\|4570980_4571679_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP040391.1\|WP_002888347.1\|4566957_4567497_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP040391.1\|WP_002888345.1\|4567676_4569041_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP040391.1\|WP_002888370.1\|4555345_4556191_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP040391.1\|WP_002888327.1\|4576477_4577467_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0

>NZ_CP040391.1|WP_002888345.1|4567676_4569041_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP040391.1|WP_002888347.1|4566957_4567497_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP040391.1|WP_002888348.1|4566223_4566883_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPKQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP040391.1|WP_004151368.1|4563304_4566211_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESIDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAGIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP040391.1|WP_002888349.1|4560759_4563117_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLIEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSHVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP040391.1|WP_002888353.1|4559888_4560584_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP040391.1|WP_002888357.1|4558248_4559751_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATVEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP040391.1|WP_002888368.1|4556528_4558238_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQSVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSKAALTH
>NZ_CP040391.1|WP_002888370.1|4555345_4556191_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVREACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP040391.1|WP_002888373.1|4554449_4555217_-|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR
>NZ_CP040391.1|WP_002888340.1|4569365_4570991_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP040391.1|WP_002888337.1|4570980_4571679_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP040391.1|WP_002888332.1|4571711_4572539_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP040391.1|WP_004147026.1|4572782_4575131_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP040391.1|WP_002888329.1|4575185_4576472_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP040391.1|WP_002888327.1|4576477_4577467_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP040391.1|WP_002888324.1|4577463_4578285_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP040391.1|WP_002888323.1|4578287_4578665_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP040391.1|WP_002888321.1|4578669_4579518_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAVAS
>NZ_CP040391.1|WP_002888320.1|4579773_4580253_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

445081 : 510672

uncultured_Caudovirales_phage(57.89%)

protease,head,tail,capsid,tRNA,integrase,terminase,portal,transposase

attL 457596:457613|attR 474897:474914

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002919147.1\|445081_446029_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	2.2e-07	37.2
WP_002919144.1\|446043_446553_-	peptide deformylase	E3SLL2	Synechococcus_phage	2.6e-18	40.3
WP_002919139.1\|446681_447806_+	DNA-protecting protein DprA	NA	NA	NA	NA
WP_002919137.1\|447777_448251_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_004145330.1\|448276_448819_+	hypothetical protein	NA	NA	NA	NA
WP_002919132.1\|448823_449396_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA
WP_002919126.1\|449399_450218_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_002919125.1\|450214_450472_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_002919123.1\|450447_451002_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002919103.1\|451704_451926_-	membrane protein	NA	NA	NA	NA
WP_002919102.1\|452219_455330_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_002919101.1\|455342_456482_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004150972.1\|456860_457511_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA
457596:457613	attL	NA	NA	NA	NA
WP_004150971.1\|457786_459013_+\|integrase	site-specific integrase	A0A2H4JB45	uncultured_Caudovirales_phage	1.8e-150	62.2
WP_004150970.1\|459105_460047_+	hypothetical protein	NA	NA	NA	NA
WP_001547839.1\|460228_460513_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_004150969.1\|460523_461303_+	hypothetical protein	Q8HA02	Enterobacteria_phage	6.2e-40	51.5
WP_106918304.1\|461754_462024_+	host cell division inhibitor Icd-like protein	A0A2H4JGW3	uncultured_Caudovirales_phage	2.4e-44	94.4
WP_001549752.1\|462016_462205_+	hypothetical protein	NA	NA	NA	NA
WP_004150967.1\|462197_462512_+	hypothetical protein	NA	NA	NA	NA
WP_004150966.1\|462508_462877_+	hypothetical protein	A0A2H4JCX7	uncultured_Caudovirales_phage	3.7e-51	81.1
WP_001549749.1\|462873_463239_+	hypothetical protein	NA	NA	NA	NA
WP_004150965.1\|463238_465374_+	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.4e-205	62.4
WP_004150964.1\|465716_466052_+	hypothetical protein	NA	NA	NA	NA
WP_004150963.1\|466100_466613_-	hypothetical protein	NA	NA	NA	NA
WP_001549743.1\|466876_468043_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	9.8e-207	95.9
WP_001547826.1\|468094_468655_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	1.2e-98	95.7
WP_004150962.1\|468656_469898_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	1.0e-230	96.5
WP_004150961.1\|469894_470230_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	3.7e-26	57.8
WP_001547824.1\|470226_470526_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JD08	uncultured_Caudovirales_phage	3.4e-39	80.8
WP_085955245.1\|470841_472033_+\|transposase	IS3-like element ISKpn18 family transposase	U5P429	Shigella_phage	3.5e-50	43.5
WP_075666936.1\|472077_472275_+	HNH endonuclease	A0A2H4JAS8	uncultured_Caudovirales_phage	1.5e-27	86.2
WP_000113647.1\|472550_472907_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	5.5e-60	99.2
WP_004150955.1\|472890_474552_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	0.0e+00	98.0
WP_004150954.1\|474554_474746_+	hypothetical protein	NA	NA	NA	NA
WP_000462905.1\|474899_475196_-	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA
474897:474914	attR	NA	NA	NA	NA
WP_004144972.1\|475220_476186_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_002918745.1\|476543_477425_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_002918742.1\|477436_478888_-	sodium/pantothenate symporter	NA	NA	NA	NA
WP_002918740.1\|478877_479120_-	YhdT family protein	NA	NA	NA	NA
WP_002918738.1\|479230_480580_-	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_002918736.1\|480590_481058_-	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA
WP_002918732.1\|481080_481533_-	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA
WP_002918689.1\|481756_482365_-	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA
WP_002918688.1\|482364_483366_-	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA
WP_002918687.1\|483594_483786_+	hypothetical protein	NA	NA	NA	NA
WP_002918686.1\|483865_485806_+	RNase E specificity factor CsrD	NA	NA	NA	NA
WP_002918653.1\|486111_487155_+	rod shape-determining protein	F2Y0P3	Organic_Lake_phycodnavirus	6.7e-05	22.3
WP_004149974.1\|487225_488218_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_002918648.1\|488217_488706_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_002918646.1\|488713_489295_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_002918644.1\|489297_490767_+	ribonuclease G	NA	NA	NA	NA
WP_004150952.1\|490804_494602_+	AsmA2 domain-containing protein	NA	NA	NA	NA
WP_002918642.1\|494690_496136_+\|protease	metalloprotease TldD	NA	NA	NA	NA
WP_002918641.1\|496171_497101_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA
WP_002918640.1\|497232_497436_+	AaeX family protein	NA	NA	NA	NA
WP_002918639.1\|497443_498376_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA
WP_002918632.1\|498381_500349_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA
WP_002918629.1\|500428_500704_+	hypothetical protein	NA	NA	NA	NA
WP_002918627.1\|500754_501021_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918626.1\|501119_501383_-	peroxide/acid stress response protein YhcN	NA	NA	NA	NA
WP_002918625.1\|501758_502229_-	transcriptional regulator ArgR	NA	NA	NA	NA
WP_002918570.1\|502643_503582_+	malate dehydrogenase	NA	NA	NA	NA
WP_002918568.1\|503718_504777_-	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA
WP_002918566.1\|504864_506232_-\|protease	serine endoprotease DegQ	A0A1B1IT49	uncultured_Mediterranean_phage	6.0e-22	25.3
WP_002918565.1\|506405_506804_-	DUF1043 family protein	NA	NA	NA	NA
WP_004144945.1\|506994_508122_+	cell division protein ZapE	NA	NA	NA	NA
WP_002918559.1\|508387_508816_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_000829818.1\|508831_509224_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_135801240.1\|509281_509566_+	hypothetical protein	NA	NA	NA	NA
WP_002918467.1\|509535_510174_+	stringent starvation protein A	NA	NA	NA	NA
WP_002918465.1\|510177_510672_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.5e-26	54.8

DBSCAN-SWA_2

662951 : 683427

Salmonella_phage(50.0%)

integrase,transposase

attL 662032:662045|attR 673166:673179

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
662032:662045	attL	NA	NA	NA	NA
WP_000290290.1\|662951_664268_+\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	3.5e-35	28.8
WP_000268404.1\|664397_664994_+	hypothetical protein	A0A1B0VBK8	Salmonella_phage	9.4e-97	87.4
WP_000256688.1\|665076_666681_-	hypothetical protein	NA	NA	NA	NA
WP_000265818.1\|667460_667688_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_024201514.1\|667750_668497_+	hypothetical protein	NA	NA	NA	NA
WP_001428286.1\|668778_669279_+	hypothetical protein	NA	NA	NA	NA
WP_000628304.1\|669660_670275_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000287905.1\|670302_670869_+	inovirus-type Gp2 protein	NA	NA	NA	NA
WP_160221292.1\|671075_672059_-\|transposase	IS3 family transposase	Q9ZXG3	Shigella_phage	1.4e-166	94.9
WP_001067855.1\|672088_672793_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000454193.1\|673059_673410_+	DUF3330 domain-containing protein	NA	NA	NA	NA
673166:673179	attR	NA	NA	NA	NA
WP_000147567.1\|673535_674096_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_160221288.1\|674098_677050_+\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.5
WP_046788546.1\|677058_677460_+	hypothetical protein	NA	NA	NA	NA
WP_001067784.1\|677544_678249_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_001447541.1\|679173_680058_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214122.1\|680274_681489_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001255015.1\|681516_681822_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015344975.1\|681933_683427_+\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1283429 : 1358560

Salmonella_phage(81.82%)

head,tail,capsid,tRNA,integrase,terminase,lysis,portal,plate

attL 1282262:1282308|attR 1317510:1317556

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1282262:1282308	attL	NA	NA	NA	NA
WP_000155498.1\|1283429_1284470_-\|integrase	site-specific integrase	A0A1S6L016	Salmonella_phage	1.7e-189	92.7
WP_031591564.1\|1284473_1285106_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	3.8e-64	57.1
WP_000102105.1\|1285222_1285465_+	Rha family transcriptional regulator	A0A1S6KZZ6	Salmonella_phage	6.8e-38	97.5
WP_031591568.1\|1285497_1286007_+	phage regulatory CII family protein	E5G6L3	Salmonella_phage	3.9e-83	94.7
WP_000956190.1\|1286014_1286215_+	DUF2724 domain-containing protein	E5G6L4	Salmonella_phage	2.4e-33	100.0
WP_031591570.1\|1286178_1286520_+	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.7e-55	97.3
WP_016529331.1\|1286587_1286821_+	DUF2732 family protein	E5G6L6	Salmonella_phage	1.2e-31	96.1
WP_031591572.1\|1286820_1287048_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	3.0e-35	97.3
WP_065953674.1\|1287044_1287902_+	DNA adenine methylase	E5G6L8	Salmonella_phage	7.1e-162	97.5
WP_042943241.1\|1287898_1290313_+	replication endonuclease	E5G6L9	Salmonella_phage	0.0e+00	98.4
WP_001154434.1\|1290466_1290655_+	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_032357588.1\|1290665_1290899_+	DinI family protein	E5G6M1	Salmonella_phage	1.1e-32	88.3
WP_000020981.1\|1291296_1291767_+	hypothetical protein	Q6SE88	Lactobacillus_prophage	8.4e-24	42.2
WP_001369944.1\|1291770_1292352_+	hypothetical protein	NA	NA	NA	NA
WP_001555843.1\|1292329_1292701_+	ASCH domain-containing protein	Q6SE87	Lactobacillus_prophage	2.6e-28	48.4
WP_042943469.1\|1292695_1293241_-	AAA family ATPase	NA	NA	NA	NA
WP_072042792.1\|1293306_1293684_+	ASCH domain-containing protein	NA	NA	NA	NA
WP_040149917.1\|1293695_1294487_+	hypothetical protein	NA	NA	NA	NA
WP_042943442.1\|1294483_1295527_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	2.9e-170	86.1
WP_031591583.1\|1295526_1297293_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.1
WP_002895967.1\|1297435_1298269_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_065811136.1\|1298285_1299344_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_000059191.1\|1299347_1299998_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_002896151.1\|1300093_1300558_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_031591593.1\|1300557_1300761_+\|tail	tail protein X	E5G6M9	Salmonella_phage	5.2e-31	91.0
WP_000171568.1\|1300764_1300980_+	hypothetical protein	E5G6N0	Salmonella_phage	1.8e-26	80.3
WP_031591597.1\|1300960_1301476_+	lysozyme	E5G6N1	Salmonella_phage	4.0e-88	91.8
WP_031591599.1\|1301472_1301901_+\|lysis	LysB family phage lysis regulatory protein	E5G6N2	Salmonella_phage	1.5e-59	91.5
WP_001039947.1\|1301996_1302428_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	1.3e-71	93.0
WP_031591600.1\|1302420_1302885_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	5.5e-60	83.6
WP_042943378.1\|1302972_1304484_+	hypothetical protein	NA	NA	NA	NA
WP_031591602.1\|1304610_1305189_+\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	1.6e-93	86.5
WP_031591604.1\|1305185_1305545_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	9.5e-52	86.6
WP_031591606.1\|1305531_1306440_+\|plate	baseplate assembly protein	A0A1S6KZY6	Salmonella_phage	4.6e-143	90.4
WP_001086836.1\|1306432_1307038_+\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.5e-110	92.5
WP_040197578.1\|1308469_1308946_+\|tail	tail fiber assembly protein	A0A0M4RTP2	Salmonella_phage	1.4e-15	50.5
WP_040197576.1\|1309079_1310252_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	8.6e-203	90.3
WP_001504081.1\|1310261_1310777_+\|tail	phage major tail tube protein	A0A1S6L002	Salmonella_phage	4.8e-89	94.7
WP_001281009.1\|1310831_1311134_+\|tail	phage tail assembly protein	A0A1S6KZZ9	Salmonella_phage	5.3e-40	89.0
WP_000763311.1\|1311148_1311268_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.8e-13	87.2
WP_042943375.1\|1311260_1314338_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	0.0e+00	63.6
WP_016529761.1\|1314334_1314820_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.8e-67	80.6
WP_031591350.1\|1314816_1315917_+	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	1.4e-175	87.2
WP_065953673.1\|1316007_1316226_+	transcriptional regulator	Q53ZE7	Salmonella_virus	7.1e-18	70.3
WP_042943290.1\|1316629_1317403_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_002914164.1\|1318018_1318501_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.3e-29	47.4
1317510:1317556	attR	NA	NA	NA	NA
WP_004188817.1\|1318611_1319088_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA
WP_002914161.1\|1319077_1319368_+	RnfH family protein	NA	NA	NA	NA
WP_002914160.1\|1319434_1319776_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA
WP_002914159.1\|1319923_1321585_-	DNA repair protein RecN	NA	NA	NA	NA
WP_002914158.1\|1321671_1322550_-	NAD(+) kinase	NA	NA	NA	NA
WP_002914155.1\|1322674_1323265_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_004149392.1\|1323384_1324671_-	HlyC/CorC family transporter	NA	NA	NA	NA
WP_002914153.1\|1324690_1325482_-	inner membrane protein YpjD	NA	NA	NA	NA
WP_002914152.1\|1325645_1327010_+	signal recognition particle protein	NA	NA	NA	NA
WP_002914149.1\|1327269_1327518_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_004150977.1\|1327536_1328085_+	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002914147.1\|1328116_1328884_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002914145.1\|1328923_1329271_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_002914119.1\|1329390_1329849_+	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_002914118.1\|1329905_1331276_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_002914117.1\|1331284_1331767_-	OmpA family protein	NA	NA	NA	NA
WP_002914116.1\|1331780_1333004_-	diguanylate cyclase DgcN	NA	NA	NA	NA
WP_004174804.1\|1332996_1333506_-	YfiR family protein	NA	NA	NA	NA
WP_002914114.1\|1333848_1334919_+	3-deoxy-7-phosphoheptulonate synthase AroF	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	1.8e-90	51.5
WP_002914113.1\|1334928_1336050_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_002914112.1\|1336112_1336985_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_004150975.1\|1336981_1338142_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA
WP_100250063.1\|1338242_1338290_-	hypothetical protein	NA	NA	NA	NA
WP_002914111.1\|1338396_1338732_-	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_004145664.1\|1339002_1339740_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA
WP_002914110.1\|1339871_1340852_+	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA
WP_002914109.1\|1340848_1341580_+	polyphenol oxidase	NA	NA	NA	NA
WP_004150973.1\|1341709_1344283_+	ATP-dependent chaperone ClpB	H6X3M6	Enterobacteria_phage	6.9e-128	35.4
WP_002914097.1\|1350248_1351547_+	MFS transporter	Q6JIH2	Burkholderia_virus	3.1e-44	31.5
WP_002914095.1\|1351550_1351874_-	YfiM family lipoprotein	NA	NA	NA	NA
WP_002914094.1\|1351915_1353271_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA
WP_004188841.1\|1353391_1356043_-	protein lysine acetyltransferase	NA	NA	NA	NA
WP_002914092.1\|1356077_1356776_-	DTW domain-containing protein	NA	NA	NA	NA
WP_002914091.1\|1356845_1357271_-	thioredoxin TrxC	A0A1J0GW78	Streptomyces_phage	6.0e-13	40.2
WP_002914089.1\|1357474_1358560_+\|tRNA	tRNA/rRNA methyltransferase	NA	NA	NA	NA

DBSCAN-SWA_4

1769222 : 1776127

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1769222_1770086_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_023307294.1\|1770096_1770870_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_002912636.1\|1771110_1772004_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1772249_1773611_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004175198.1\|1773929_1774652_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004149058.1\|1774648_1776127_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_5

1819249 : 1828698

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077271909.1\|1819249_1820092_+	glycosyltransferase	A0A0N9QZR6	Chrysochromulina_ericina_virus	2.4e-13	30.3
WP_014343305.1\|1820319_1821726_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7
WP_042943911.1\|1821948_1823013_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	7.5e-105	54.7
WP_004175258.1\|1823039_1823909_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_029498787.1\|1823940_1824831_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.8e-28	34.2
WP_064449913.1\|1824845_1825400_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	8.6e-52	57.6
WP_009484573.1\|1825580_1826747_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.5
WP_004144151.1\|1827170_1827293_-	small membrane protein	NA	NA	NA	NA
WP_042943910.1\|1827693_1828698_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	2.3e-31	29.5

DBSCAN-SWA_6

2826672 : 2837559

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004151613.1\|2826672_2829780_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6
WP_004151612.1\|2829834_2831100_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2831130_2832219_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_002904006.1\|2832305_2832566_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_004176269.1\|2832863_2833724_+	class A broad-spectrum beta-lactamase SHV-11	A0A077SL40	Escherichia_phage	2.2e-155	99.3
WP_002210513.1\|2833744_2834506_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_004151610.1\|2834766_2835669_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_004151609.1\|2835680_2836946_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	6.6e-233	99.5
WP_002210516.1\|2836938_2837559_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_7

3067263 : 3105729

uncultured_Caudovirales_phage(34.04%)

terminase,integrase

attL 3096842:3096856|attR 3102851:3102865

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004152576.1\|3067263_3068130_-	hypothetical protein	A0A2H4IYR0	uncultured_Caudovirales_phage	1.9e-34	64.5
WP_004152575.1\|3068129_3068903_-	DUF2612 domain-containing protein	A0A2H4J1A9	uncultured_Caudovirales_phage	2.8e-77	54.4
WP_004152574.1\|3068899_3070096_-	hypothetical protein	A0A0M4RD32	Salmonella_phage	3.9e-158	72.9
WP_004152573.1\|3070095_3070449_-	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_004152572.1\|3070450_3071104_-	hypothetical protein	A0A2H4J8H6	uncultured_Caudovirales_phage	1.0e-59	63.5
WP_004152571.1\|3071157_3071724_-	hypothetical protein	NA	NA	NA	NA
WP_004199301.1\|3071766_3071949_-	hypothetical protein	NA	NA	NA	NA
WP_004152570.1\|3071998_3072340_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	1.8e-23	46.6
WP_004152569.1\|3072339_3073362_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	9.2e-100	54.2
WP_004152568.1\|3073364_3073667_-	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	55.2
WP_004152567.1\|3073667_3074267_-	hypothetical protein	A0A2H4J1B3	uncultured_Caudovirales_phage	9.9e-54	57.6
WP_004152566.1\|3074266_3076270_-	lytic transglycosylase domain-containing protein	A0A2H4J9N7	uncultured_Caudovirales_phage	1.2e-247	63.6
WP_004152565.1\|3076259_3076412_-	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	7.6e-19	88.0
WP_004152564.1\|3076447_3076873_-	hypothetical protein	A0A2H4J2V6	uncultured_Caudovirales_phage	2.6e-40	63.4
WP_004199809.1\|3076876_3077317_-	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	3.3e-62	80.1
WP_004152177.1\|3077327_3078473_-	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	6.3e-166	76.9
WP_004152176.1\|3078476_3078917_-	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.6e-40	51.7
WP_001116156.1\|3079011_3079398_-	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-48	78.2
WP_000834982.1\|3079397_3079904_-	hypothetical protein	NA	NA	NA	NA
WP_000113538.1\|3079900_3080320_-	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	3.3e-40	60.7
WP_000725700.1\|3080288_3080570_-	hypothetical protein	NA	NA	NA	NA
WP_001132269.1\|3080609_3081551_-	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.7e-137	77.1
WP_000528476.1\|3081562_3082057_-	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	4.2e-50	62.7
WP_004199270.1\|3082060_3083263_-	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	2.6e-106	54.1
WP_004152174.1\|3083314_3083863_-	hypothetical protein	A0A0M4REK0	Salmonella_phage	3.0e-49	56.3
WP_004152173.1\|3083918_3085370_-	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	3.8e-192	68.8
WP_004152172.1\|3085607_3087008_-\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	9.4e-188	69.0
WP_004152171.1\|3086958_3087711_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.0e-12	66.0
WP_004152170.1\|3087812_3088133_-	hypothetical protein	NA	NA	NA	NA
WP_004153952.1\|3088367_3088757_-	lipase chaperone	A0A192Y6H8	Salmonella_phage	9.4e-21	49.2
WP_004152169.1\|3088753_3089284_-	lysozyme	K7PLY1	Enterobacteria_phage	2.7e-79	77.1
WP_004146526.1\|3089286_3089535_-	hypothetical protein	NA	NA	NA	NA
WP_004152167.1\|3089940_3090723_-	antitermination protein	F1C595	Cronobacter_phage	7.2e-113	76.8
WP_004198239.1\|3090719_3091196_-	hypothetical protein	A0A286N2Q1	Klebsiella_phage	1.8e-90	100.0
WP_004198233.1\|3091192_3092155_-	zinc-binding domain of primase-helicase family protein	A0A286N2Q0	Klebsiella_phage	4.8e-183	99.4
WP_004198228.1\|3092156_3093815_-	DEAD/DEAH box helicase	A0A286N2P9	Klebsiella_phage	0.0e+00	96.0
WP_004152162.1\|3094391_3094613_-	helix-turn-helix transcriptional regulator	A0A286S2C1	Klebsiella_phage	3.0e-32	100.0
WP_004152161.1\|3094710_3095379_+	LexA family transcriptional regulator	A0A286S2B2	Klebsiella_phage	2.4e-125	99.5
WP_004152160.1\|3095549_3095864_+	hypothetical protein	A0A286S1T9	Klebsiella_phage	1.0e-49	100.0
WP_004152159.1\|3095856_3096045_+	hypothetical protein	A0A286S1P8	Klebsiella_phage	4.6e-26	100.0
WP_004152158.1\|3096214_3096580_+	hypothetical protein	A0A286S1Q6	Klebsiella_phage	6.9e-58	99.2
WP_004152157.1\|3096572_3096827_+	hypothetical protein	A0A286SGR4	Klebsiella_phage	3.1e-41	97.6
WP_004177208.1\|3096798_3097017_+	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.6e-32	98.6
3096842:3096856	attL	NA	NA	NA	NA
WP_004152156.1\|3097013_3097439_+	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.5e-53	77.9
WP_004152155.1\|3097435_3097630_+	hypothetical protein	NA	NA	NA	NA
WP_004152154.1\|3097626_3098454_+	hypothetical protein	Q8W654	Enterobacteria_phage	5.5e-111	84.0
WP_004152153.1\|3098558_3099077_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	1.7e-94	98.8
WP_004154298.1\|3099082_3099793_+	DNA-binding protein	A0A286S260	Klebsiella_phage	2.1e-111	88.3
WP_004152151.1\|3099782_3100007_+	hypothetical protein	A0A286S2B3	Klebsiella_phage	3.1e-29	89.2
WP_004152150.1\|3100003_3100216_+	hypothetical protein	A0A286S2B6	Klebsiella_phage	3.4e-33	98.6
WP_004152149.1\|3100212_3100692_+	hypothetical protein	NA	NA	NA	NA
WP_004152148.1\|3100870_3101113_+	hypothetical protein	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_004152147.1\|3101093_3102275_-\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	5.6e-202	84.2
WP_016197745.1\|3102471_3103020_+	DJ-1/PfpI family protein	NA	NA	NA	NA
3102851:3102865	attR	NA	NA	NA	NA
WP_004152145.1\|3103218_3104751_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.1e-21	30.0
WP_004152144.1\|3104967_3105729_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	2.4e-20	32.5

DBSCAN-SWA_8

3138662 : 3191702

Klebsiella_phage(19.61%)

tail,integrase,terminase,holin,transposase

attL 3138444:3138459|attR 3189008:3189023

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3138444:3138459	attL	NA	NA	NA	NA
WP_002901815.1\|3138662_3139334_+	SOS response-associated peptidase	A0A2H4J5W2	uncultured_Caudovirales_phage	4.5e-79	59.6
WP_071531199.1\|3139520_3140348_+	FRG domain-containing protein	A0A1S6KZX9	Salmonella_phage	8.4e-19	30.2
WP_002901813.1\|3140423_3141689_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	9.6e-208	82.7
WP_002901812.1\|3141690_3142110_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.4e-35	57.5
WP_160221289.1\|3142189_3142549_-	retA reverse transcriptase	NA	NA	NA	NA
WP_001067855.1\|3142607_3143312_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_004152700.1\|3143671_3144403_-	hypothetical protein	NA	NA	NA	NA
WP_160221290.1\|3144406_3147361_-	hypothetical protein	A0A286S1P0	Klebsiella_phage	4.2e-44	68.3
WP_004152652.1\|3147437_3150506_-	hypothetical protein	A0A286S259	Klebsiella_phage	0.0e+00	97.5
WP_004152651.1\|3150502_3150883_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.8e-72	99.2
WP_004152650.1\|3150892_3151375_-	DUF1833 domain-containing protein	A0A286S2B1	Klebsiella_phage	1.7e-80	94.4
WP_004152649.1\|3151555_3152020_-	hypothetical protein	A0A286S298	Klebsiella_phage	6.7e-58	67.8
WP_004152648.1\|3152334_3152670_-	hypothetical protein	NA	NA	NA	NA
WP_004217331.1\|3152753_3155651_-\|tail	tail protein	A0A2H4J107	uncultured_Caudovirales_phage	1.6e-104	32.7
WP_099119318.1\|3155912_3156104_-	hypothetical protein	S4TR42	Salmonella_phage	7.8e-05	78.3
WP_004217333.1\|3156328_3156685_-	hypothetical protein	A0A1V0E5P9	Salmonella_phage	1.1e-44	75.0
WP_016831940.1\|3156761_3156968_-	hypothetical protein	NA	NA	NA	NA
WP_004226994.1\|3157105_3157588_-	hypothetical protein	NA	NA	NA	NA
WP_004217341.1\|3157641_3158814_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	1.2e-23	27.0
WP_004190640.1\|3158837_3159230_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_004217343.1\|3159226_3159778_-	hypothetical protein	G8C7Q1	Escherichia_phage	1.3e-28	39.9
WP_004217344.1\|3159779_3160163_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	7.1e-21	45.2
WP_004190646.1\|3160149_3160383_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
WP_004217346.1\|3160392_3160647_-	hypothetical protein	J9Q7U0	Salmonella_phage	1.0e-20	52.4
WP_004217348.1\|3160648_3161044_-	hypothetical protein	A0A1B1P9F2	Acinetobacter_phage	4.3e-13	38.5
WP_142689607.1\|3161084_3161357_-	hypothetical protein	NA	NA	NA	NA
WP_004190653.1\|3161365_3162319_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	5.0e-132	74.4
WP_004217351.1\|3162329_3163115_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.0e-66	63.9
WP_019405022.1\|3163645_3164758_-	hypothetical protein	I6PD76	Cronobacter_phage	5.6e-111	55.1
WP_004218551.1\|3164741_3166142_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.1e-127	53.5
WP_004190663.1\|3166141_3167449_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	3.6e-149	58.9
WP_004218556.1\|3167426_3168431_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.5e-38	45.5
WP_004218558.1\|3169293_3169539_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.6e-34	96.3
WP_004190672.1\|3170497_3170773_-	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
WP_004190674.1\|3170769_3171114_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_004218565.1\|3171110_3171650_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	3.3e-101	98.9
WP_024940884.1\|3171646_3171946_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	4.5e-47	100.0
WP_022644626.1\|3172424_3173471_-\|transposase	IS481-like element ISKpn28 family transposase	A0A0M3LR35	Mannheimia_phage	1.3e-05	21.9
WP_004232548.1\|3173696_3174386_-	antiterminator-like protein	I6PDF8	Cronobacter_phage	2.1e-55	53.1
WP_004218534.1\|3174385_3174526_-	YlcG family protein	NA	NA	NA	NA
WP_004218533.1\|3174522_3175161_-	hypothetical protein	H6WRY9	Salmonella_phage	3.2e-74	69.8
WP_004218532.1\|3175153_3175822_-	serine/threonine protein phosphatase	K7P6H8	Enterobacteria_phage	1.4e-104	78.7
WP_004243010.1\|3175818_3175986_-	NinE family protein	K7P7K0	Enterobacteria_phage	4.6e-09	62.5
WP_004218531.1\|3175966_3176434_-	recombination protein NinB	Q8VNP6	Enterobacteria_phage	3.4e-33	45.8
WP_004218530.1\|3176954_3177983_+	hypothetical protein	NA	NA	NA	NA
WP_004196831.1\|3178190_3178436_-	hypothetical protein	NA	NA	NA	NA
WP_004218528.1\|3178491_3178794_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004201118.1\|3178790_3179639_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.1e-88	60.1
WP_004201117.1\|3179635_3180496_-	replication protein	K7PGT1	Enterobacteria_phage	1.0e-59	53.3
WP_001548453.1\|3180581_3180803_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004201115.1\|3180843_3181071_-	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.4e-24	77.1
WP_004201113.1\|3181182_3181881_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	3.7e-108	84.1
WP_019405077.1\|3181903_3182023_+	hypothetical protein	NA	NA	NA	NA
WP_004201109.1\|3182168_3183245_+	ParA family protein	H2BD62	Pseudomonas_phage	9.1e-58	37.9
WP_004201108.1\|3183326_3183530_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	3.9e-18	71.6
WP_004135674.1\|3183958_3184153_+	hypothetical protein	NA	NA	NA	NA
WP_004201105.1\|3184241_3184526_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	1.1e-39	79.8
WP_004201103.1\|3184541_3185387_+	phage recombination protein Bet	A0A1I9KF88	Aeromonas_phage	1.8e-69	59.2
WP_088224434.1\|3185383_3185671_+	hypothetical protein	NA	NA	NA	NA
WP_004201102.1\|3185672_3186353_+	YqaJ viral recombinase family protein	A0A0M3ULE0	Salmonella_phage	8.2e-121	91.2
WP_004151898.1\|3186349_3186778_+	hypothetical protein	M9NYX4	Enterobacteria_phage	7.5e-64	80.3
WP_004151899.1\|3186774_3187437_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.7e-105	84.6
WP_004153574.1\|3187644_3188832_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	1.1e-120	52.4
WP_004151901.1\|3189008_3189899_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3189008:3189023	attR	NA	NA	NA	NA
WP_004140266.1\|3189898_3190891_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004140269.1\|3190892_3191702_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_9

3568155 : 3653833

Salmonella_phage(50.0%)

protease,head,tail,capsid,tRNA,integrase,lysis,terminase,plate,portal

attL 3623609:3623627|attR 3653908:3653926

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002898139.1\|3568155_3569448_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.3e-94	44.7
WP_002898137.1\|3569538_3570882_-	replication-associated recombination protein A	G3MBE0	Bacillus_virus	7.3e-81	40.8
WP_002898132.1\|3570890_3571502_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_004153815.1\|3571624_3575806_-	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	5.1e-88	49.2
WP_000228469.1\|3575941_3576436_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_004141839.1\|3576941_3577937_+	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.3e-62	44.0
WP_002898017.1\|3578051_3579818_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	2.3e-21	25.9
WP_042943346.1\|3579818_3581540_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3581584_3582286_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3582639_3582858_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3582978_3585258_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3585288_3585606_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3585931_3586153_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3586229_3588170_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896440.1\|3588166_3589282_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_002896437.1\|3589428_3591087_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_002896434.1\|3591506_3592202_+	aquaporin Z	NA	NA	NA	NA
WP_004147773.1\|3592317_3593217_+	lysine exporter LysO family protein	NA	NA	NA	NA
WP_002896412.1\|3593360_3595013_+	hydroxylamine reductase	NA	NA	NA	NA
WP_002896410.1\|3595023_3595992_+	NADH oxidoreductase	NA	NA	NA	NA
WP_002896408.1\|3596203_3596638_-	DoxX family protein	NA	NA	NA	NA
WP_002896406.1\|3596789_3598508_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA
WP_002896404.1\|3598546_3599548_+	low-specificity L-threonine aldolase	NA	NA	NA	NA
WP_002896401.1\|3599558_3601001_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_002896399.1\|3601088_3602102_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_002896397.1\|3602098_3602929_-	N-acetylmuramoyl-L-alanine amidase	A0A1B0UZW5	Roseobacter_phage	4.1e-05	31.6
WP_004150851.1\|3602960_3604100_-	GGDEF domain-containing protein	NA	NA	NA	NA
WP_002896394.1\|3604977_3605493_+	lipoprotein	NA	NA	NA	NA
WP_002896392.1\|3605719_3606448_+	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	1.2e-29	37.1
WP_002896390.1\|3606468_3607200_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896386.1\|3607206_3607923_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004150852.1\|3607922_3608591_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_002896384.1\|3608774_3609506_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002896382.1\|3609548_3611021_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-28	31.8
WP_002896380.1\|3611017_3611734_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-34	36.9
WP_002896378.1\|3611812_3612940_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A2K5B251	Erysipelothrix_phage	1.3e-19	25.6
WP_002896376.1\|3612981_3613470_-	DUF2593 family protein	NA	NA	NA	NA
WP_002896372.1\|3613527_3614373_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA
WP_002896371.1\|3614369_3615323_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA
WP_002896370.1\|3615333_3616467_-	putrescine ABC transporter ATP-binding subunit PotG	G3M9Y6	Bacillus_virus	2.2e-30	34.9
WP_002896368.1\|3616630_3617743_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA
WP_002896365.1\|3618091_3618571_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_002896363.1\|3618659_3619562_-	30S ribosomal protein S6--L-glutamate ligase	A0A1D7SR78	Cyanophage	2.0e-34	35.3
WP_002896354.1\|3620383_3620671_-	YbjC family protein	NA	NA	NA	NA
WP_002896352.1\|3620873_3621137_+	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	1.6e-27	73.1
WP_002896351.1\|3621143_3621527_-	membrane protein	NA	NA	NA	NA
WP_004179131.1\|3621793_3623479_+	aspartate:alanine antiporter	NA	NA	NA	NA
3623609:3623627	attL	NA	NA	NA	NA
WP_000972391.1\|3623698_3623917_-	transcriptional activator Ogr/delta	Q53ZE7	Salmonella_virus	7.5e-20	69.0
WP_002896225.1\|3624008_3625109_-	phage late control D family protein	A0A1S6KZZ5	Salmonella_phage	4.9e-176	87.4
WP_002896224.1\|3625105_3625591_-\|tail	phage tail protein	E5G6Q2	Salmonella_phage	7.2e-63	75.6
WP_002896222.1\|3625587_3628215_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	5.6e-117	42.0
WP_002896220.1\|3628207_3628327_-\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_002896204.1\|3628341_3628641_-\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	3.7e-33	79.0
WP_002896201.1\|3628693_3629209_-\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	1.3e-81	85.4
WP_002896193.1\|3629218_3630391_-\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	1.9e-210	93.3
WP_002896191.1\|3630529_3631606_-\|tail	phage tail protein	Q37842	Escherichia_phage	1.2e-25	44.8
WP_002896188.1\|3631635_3631839_-	hypothetical protein	NA	NA	NA	NA
WP_002896186.1\|3631835_3632567_-	hypothetical protein	NA	NA	NA	NA
WP_004152882.1\|3632570_3635522_-	hypothetical protein	A0A2H4N7A3	Pectobacterium_phage	1.2e-06	50.9
WP_004150856.1\|3635523_3636123_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	1.3e-58	60.5
WP_002896182.1\|3636115_3637024_-\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_002896179.1\|3637010_3637373_-\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	5.8e-49	84.7
WP_002896177.1\|3637369_3637942_-\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	4.7e-77	72.3
WP_004150857.1\|3638036_3638729_+	hypothetical protein	NA	NA	NA	NA
WP_002896175.1\|3638725_3639172_-	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	2.2e-50	71.2
WP_002896172.1\|3639164_3639596_-\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	9.9e-64	82.5
WP_002896168.1\|3639691_3640120_-\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	9.6e-51	77.9
WP_002896163.1\|3640116_3640500_-	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	2.1e-17	42.0
WP_002896161.1\|3640504_3641014_-	lysozyme	E5G6N1	Salmonella_phage	2.1e-81	83.4
WP_002896158.1\|3640994_3641210_-	hypothetical protein	E5G6N0	Salmonella_phage	3.6e-30	90.1
WP_002896155.1\|3641213_3641417_-\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_002896151.1\|3641416_3641881_-\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	8.4e-77	89.0
WP_000059191.1\|3641976_3642627_-\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	8.7e-112	96.3
WP_065811136.1\|3642630_3643689_-\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	2.9e-181	93.4
WP_002895967.1\|3643705_3644539_-\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	6.3e-123	88.8
WP_031591583.1\|3644681_3646448_+\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	99.1
WP_002895959.1\|3646447_3647473_+\|portal	phage portal protein	A0A1S6KZW5	Salmonella_phage	7.6e-171	86.7
WP_004199124.1\|3647534_3649277_-	AIPR family protein	NA	NA	NA	NA
WP_000700647.1\|3649552_3650230_-	hypothetical protein	NA	NA	NA	NA
WP_001217575.1\|3650344_3650578_-	DinI family protein	E5G6M1	Salmonella_phage	4.7e-36	100.0
WP_001154434.1\|3650588_3650777_-	hypothetical protein	E5G6M0	Salmonella_phage	5.5e-27	98.4
WP_004152765.1\|3650877_3652362_-	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.2e-31	35.5
WP_004151720.1\|3652780_3653833_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.0e-106	57.0
3653908:3653926	attR	NA	NA	NA	NA

DBSCAN-SWA_10

4305833 : 4317487

Enterobacteria_phage(70.0%)

integrase

attL 4306283:4306297|attR 4329340:4329354

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004144574.1\|4305833_4306937_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.8e-62	40.5
4306283:4306297	attL	NA	NA	NA	NA
WP_002889940.1\|4306947_4308201_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	8.9e-89	44.9
WP_002889938.1\|4308553_4309744_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	6.4e-145	62.7
WP_004152029.1\|4309731_4310682_+	cobyrinic acid a,c-diamide synthase	A0A1X9IGI7	Lactococcus_phage	1.2e-13	27.1
WP_004152979.1\|4310681_4311107_+	hypothetical protein	NA	NA	NA	NA
WP_002889930.1\|4311675_4312242_-	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.5e-59	64.3
WP_002889919.1\|4312259_4312505_-	hypothetical protein	Q7M294	Enterobacteria_phage	1.9e-19	58.0
WP_002889917.1\|4312501_4313239_-	hypothetical protein	Q7M2A2	Enterobacteria_phage	9.0e-73	60.7
WP_002889915.1\|4313780_4314047_+	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	2.6e-30	71.6
WP_024940872.1\|4314043_4314601_+	ash family protein	Q7M2A7	Enterobacteria_phage	1.8e-33	70.4
WP_002889911.1\|4314597_4314825_+	hypothetical protein	NA	NA	NA	NA
WP_002889897.1\|4314821_4315142_+	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_002889890.1\|4315153_4317487_+	DNA primase	Q7M2A8	Enterobacteria_phage	0.0e+00	82.2
4329340:4329354	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP040391

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection