CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP024642	Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	2
NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	1 crisprs	DinG,csf2gr7	0	13	2
NZ_CP024643	Klebsiella michiganensis strain F107 chromosome, complete genome	1 crisprs	DEDDh,DinG,cas3,WYL,csa3	1	1	7

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

22135 : 30465

Faecalibacterium_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040118454.1\|22135_22837_+	methylase	A0A2K9VH43	Faecalibacterium_phage	3.4e-21	33.8
WP_020314641.1\|22836_23058_+	hypothetical protein	NA	NA	NA	NA
WP_040118455.1\|23103_23514_+	DUF1380 family protein	NA	NA	NA	NA
WP_040118456.1\|23561_24329_+	hypothetical protein	NA	NA	NA	NA
WP_040118457.1\|24753_25182_+	antirestriction protein	A9J566	Pseudomonas_phage	3.4e-08	30.5
WP_040118458.1\|25228_25735_+	antirestriction protein ArdA	G9FHQ1	Rhodococcus_virus	5.3e-08	31.9
WP_000761848.1\|25775_25967_+	hypothetical protein	NA	NA	NA	NA
WP_040118459.1\|26167_26431_+	DNA polymerase III subunit theta	H9C187	Pectobacterium_phage	3.4e-14	55.3
WP_040118460.1\|26454_26775_+	hypothetical protein	NA	NA	NA	NA
WP_040118461.1\|27541_28099_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	1.2e-48	74.4
WP_040118462.1\|28147_28396_+	DUF905 domain-containing protein	NA	NA	NA	NA
WP_040118463.1\|28464_30465_+	ParB/RepB/Spo0J family partition protein	G8DH78	Emiliania_huxleyi_virus	2.1e-23	26.8

DBSCAN-SWA_2

76651 : 112540

Stx2-converting_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004098871.1\|76651_77629_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	Q2A0A7	Sodalis_phage	4.4e-75	59.9
WP_101867698.1\|77586_77775_+	hypothetical protein	NA	NA	NA	NA
WP_004098873.1\|78092_79520_-	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA
WP_040118505.1\|79536_80136_-	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA
WP_038423659.1\|80171_81761_-\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	9.7e-173	60.6
WP_009309933.1\|81791_82142_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	9.6e-41	67.2
WP_009309932.1\|82138_82543_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.6e-23	67.5
WP_004098877.1\|82675_83746_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_004098879.1\|84342_85443_+	glycerol dehydrogenase	NA	NA	NA	NA
WP_004098881.1\|85582_87508_+	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA
WP_004098883.1\|87485_88034_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA
WP_004098885.1\|88035_88401_-	glycerol dehydratase reactivase beta/small subunit family protein	NA	NA	NA	NA
WP_004098891.1\|88470_89634_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_004098893.1\|89671_90100_-	heme-binding protein	NA	NA	NA	NA
WP_004098894.1\|90493_92161_+	propanediol/glycerol family dehydratase large subunit	NA	NA	NA	NA
WP_004098897.1\|92174_92765_+	propanediol/glycerol family dehydratase medium subunit	NA	NA	NA	NA
WP_004098899.1\|92761_93193_+	diol dehydratase small subunit	NA	NA	NA	NA
WP_004098901.1\|93205_95053_+	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA
WP_086531829.1\|95096_96113_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	3.2e-185	99.1
WP_004098904.1\|96322_97576_-	lactose permease	NA	NA	NA	NA
WP_004098907.1\|97627_100702_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	95.9
WP_004152286.1\|100823_101906_-	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	6.8e-186	96.4
WP_001067855.1\|102219_102924_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001247892.1\|103202_103493_+	nucleotidyltransferase	NA	NA	NA	NA
WP_001293886.1\|103489_103891_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_003465043.1\|103880_104237_+	cupin domain-containing protein	NA	NA	NA	NA
WP_006812576.1\|104491_104818_+	hypothetical protein	NA	NA	NA	NA
WP_003100856.1\|104814_105315_+	hypothetical protein	NA	NA	NA	NA
WP_003100853.1\|105311_105683_+	hypothetical protein	NA	NA	NA	NA
WP_003100847.1\|105676_106234_+	recombinase family protein	A0A0C4UR34	Shigella_phage	3.3e-59	63.2
WP_020316924.1\|106784_107816_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_086074166.1\|107990_108314_+	hypothetical protein	NA	NA	NA	NA
WP_049084174.1\|108456_108855_-	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_077266704.1\|108903_110250_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_001567369.1\|110475_111108_+	hypothetical protein	NA	NA	NA	NA
WP_001567368.1\|111136_112540_-\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP024641

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024641_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024641_1

150876-151698

TypeIV-A

Consensus_repeat	Method
GTATGTCCCCCGCTGGCGGGGGTTATCGG	PILER-CR
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CRISPRCasFinder
GTNTGTCCCCCGCNGGCGGGGGTTATCGG	CRT

13 spacers

csf2gr7,DinG

The CRISPR arrays of NZ_CP024641_1

>merge|NZ_CP024641|1|150876-151698|PILER-CR,CRISPRCasFinder,CRT
GTATGTCCCCCGCTGGCGGGGGTTATCGGCGGAATTTCACCTGTCCGGGCATAGGAATTTAGTATGTCCCCCGCTGGCGGGGGTTATCGGTATTTAGTCAAACCATGAGACCGCGCACTCTGGTATGTCCCCCGCTGGCGGGGGTTATCGGCGCATCCTTGAATAGGCCATAAATTTCTGCGTGTATGTCCCCCGCTGGCGGGGGTTATCGGATCAGCGCCAGGGCATGCTTTTTTCTCGTTGAGTATGTCCCCCGCTGGCGGGGGTTATCGGTCTCCGTTAACAGTTTCATCGCCAAGGACTGTATATGTCCCCTGCTGGCGGGGGTTATCGGTAGGCAGAAATGACCTGGATGAGCGAGGTTATGTATGTCCCCCGCAGCCGGGGGTTATTGGTGTCCCATTTGCGGCGCTGTTGCCAAAACGCGGTCTGTTTCTCGCAGGCGGGGGTTATCGGGGCAGGCGCTCTACCTGCTGAGCTTAACCAGCAGTATGTCCCCCGCTGGCGGGGGTTATCGTCATATCAATGATCCCAATTCTGTTCAGTTGCAGTGCGTCCCCCGGGGACGGGGGTTATCGGTCCACAACCAGATCATAAAATCTCCTTCCCGAGTGTGTCCCCCGGTTGTGGGGGTTATCGGTAGACTAAATATGGGGCGACGACCTCGCCACAGTTTATCCCCCGGATGCGGGGGTTATCGGTTGTATGACCGGGTTCCACCTGGTGTCTGGAAGTGTATCCCCCGCATCCGGGGGTTATCGGTTCTTCAGCGCGTCAGTCCCGCTTCCCTGTATGTATGTCCCCCGCATGCGGGGGTTATAGA

>NZ_CP024641|1|1|150876-151148|PILER-CR
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGGAATTTCACCTGTCCGGGCATAGGAATTTA
GTATGTCCCCCGCTGGCGGGGGTTATCGG	TATTTAGTCAAACCATGAGACCGCGCACTCTG
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGCATCCTTGAATAGGCCATAAATTTCTGCGT
GTATGTCCCCCGCTGGCGGGGGTTATCGG	ATCAGCGCCAGGGCATGCTTTTTTCTCGTTGA
GTATGTCCCCCGCTGGCGGGGGTTATCGG

>NZ_CP024641|1|1|150876-151576|CRISPRCasFinder
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGGAATTTCACCTGTCCGGGCATAGGAATTTA
GTATGTCCCCCGCTGGCGGGGGTTATCGG	TATTTAGTCAAACCATGAGACCGCGCACTCTG
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGCATCCTTGAATAGGCCATAAATTTCTGCGT
GTATGTCCCCCGCTGGCGGGGGTTATCGG	ATCAGCGCCAGGGCATGCTTTTTTCTCGTTGA
GTATGTCCCCCGCTGGCGGGGGTTATCGG	TCTCCGTTAACAGTTTCATCGCCAAGGACTGT
ATATGTCCCCTGCTGGCGGGGGTTATCGG	TAGGCAGAAATGACCTGGATGAGCGAGGTTAT
GTATGTCCCCCGCAGCCGGGGGTTATTGG	TGTCCCATTTGCGGCGCTGTTGCCAAAACGCG
GTCTGTTTCTCGCAGGCGGGGGTTATCGG	GGCAGGCGCTCTACCTGCTGAGCTTAACCAGCA
GTATGTCCCCCGCTGGCGGGGGTTATCGT	CATATCAATGATCCCAATTCTGTTCAGTTGCA
GTGCGTCCCCCGGGGACGGGGGTTATCGG	TCCACAACCAGATCATAAAATCTCCTTCCCGA
GTGTGTCCCCCGGTTGTGGGGGTTATCGG	TAGACTAAATATGGGGCGACGACCTCGCCACA
GTTTATCCCCCGGATGCGGGGGTTATCGG

>NZ_CP024641|1|1|150876-151698|CRT
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGGAATTTCACCTGTCCGGGCATAGGAATTTA
GTATGTCCCCCGCTGGCGGGGGTTATCGG	TATTTAGTCAAACCATGAGACCGCGCACTCTG
GTATGTCCCCCGCTGGCGGGGGTTATCGG	CGCATCCTTGAATAGGCCATAAATTTCTGCGT
GTATGTCCCCCGCTGGCGGGGGTTATCGG	ATCAGCGCCAGGGCATGCTTTTTTCTCGTTGA
GTATGTCCCCCGCTGGCGGGGGTTATCGG	TCTCCGTTAACAGTTTCATCGCCAAGGACTGT
ATATGTCCCCTGCTGGCGGGGGTTATCGG	TAGGCAGAAATGACCTGGATGAGCGAGGTTAT
GTATGTCCCCCGCAGCCGGGGGTTATTGG	TGTCCCATTTGCGGCGCTGTTGCCAAAACGCG
GTCTGTTTCTCGCAGGCGGGGGTTATCGG	GGCAGGCGCTCTACCTGCTGAGCTTAACCAGCA
GTATGTCCCCCGCTGGCGGGGGTTATCGT	CATATCAATGATCCCAATTCTGTTCAGTTGCA
GTGCGTCCCCCGGGGACGGGGGTTATCGG	TCCACAACCAGATCATAAAATCTCCTTCCCGA
GTGTGTCCCCCGGTTGTGGGGGTTATCGG	TAGACTAAATATGGGGCGACGACCTCGCCACA
GTTTATCCCCCGGATGCGGGGGTTATCGG	TTGTATGACCGGGTTCCACCTGGTGTCTGGAA
GTGTATCCCCCGCATCCGGGGGTTATCGG	TTCTTCAGCGCGTCAGTCCCGCTTCCCTGTAT
GTATGTCCCCCGCATGCGGGGGTTATAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024641.1\|WP_062878110.1\|160928_161183_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_170916005.1\|149778_150810_+\|CRISPR-associated-protein-Csf2	csf2gr7	mkCas0162_csf2gr7_CAS-IV-A	gnl\|CDD\|274435
NZ_CP024641.1\|WP_062878109.1\|160618_160834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_009653224.1\|156577_156838_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_104022015.1\|155075_156137_-\|IS481-like-element-ISKpn28-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP024641.1\|WP_009654235.1\|144696_145107_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_014839919.1\|158707_159085_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_062878111.1\|161255_161603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_042928382.1\|152750_153173_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP024641.1\|WP_052544865.1\|152030_152447_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_009654202.1\|144078_144261_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_017900895.1\|156208_156370_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|182055
NZ_CP024641.1\|WP_080932150.1\|149065_149773_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_169516759.1\|146089_146620_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_009654205.1\|143663_144086_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377101
NZ_CP024641.1\|WP_042928373.1\|144253_144673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_080932148.1\|147197_149072_+\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP024641.1\|WP_064371373.1\|146622_147195_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	unknown	unknown	gnl\|CDD\|187858
NZ_CP024641.1\|WP_009653249.1\|157375_158347_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP024641.1\|WP_009654200.1\|145164_145653_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376820

Protein	Function_ID	Function_description	E-value
NZ_CP024641.1\|WP_104022015.1\|155075_156137_-\|IS481-like-element-ISKpn28-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	7.01856e-12
NZ_CP024641.1\|WP_170916005.1\|149778_150810_+\|CRISPR-associated-protein-Csf2	gnl\|CDD\|274435	TIGR03115, cas7_csf2, CRISPR type IV/AFERR-associated protein Csf2. Members of this family show up near CRISPR repeats in Acidithiobacillus ferrooxidans ATCC 23270, Azoarcus sp. EbN1, and Rhodoferax ferrireducens DSM 15236. In the latter two species, the CRISPR/cas locus is found on a plasmid. This family is one of several characteristic of a type of CRISPR-associated (cas) gene cluster we designate Aferr after A. ferrooxidans, where it is both chromosomal and the only type of cas gene cluster found. The gene is designated csf2 (CRISPR/cas Subtype as in A. ferrooxidans protein 2), as it lies second closest to the repeats.	7.1556e-07
NZ_CP024641.1\|WP_017900895.1\|156208_156370_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|182055	PRK09738, PRK09738, small toxic polypeptide; Provisional.	6.88218e-23
NZ_CP024641.1\|WP_042928382.1\|152750_153173_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	1.21179e-56
NZ_CP024641.1\|WP_009654205.1\|143663_144086_+\|hypothetical-protein	gnl\|CDD\|377101	pfam03699, UPF0182, Uncharacterized protein family (UPF0182). This family contains uncharacterized integral membrane proteins.	0.00858732
NZ_CP024641.1\|WP_080932148.1\|147197_149072_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	4.06775e-33
NZ_CP024641.1\|WP_064371373.1\|146622_147195_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	1.7155e-06
NZ_CP024641.1\|WP_009654200.1\|145164_145653_+\|hypothetical-protein	gnl\|CDD\|376820	pfam02562, PhoH, PhoH-like protein. PhoH is a cytoplasmic protein and predicted ATPase that is induced by phosphate starvation.	0.000868039

>NZ_CP024641.1|WP_170916005.1|149778_150810_+|CRISPR-associated-protein-Csf2
MRTLNFNGKISTLEPMTVSLKNAVTTTGHRLPRNGGFNSAPYFPGTSIRGTLRHAAHLVVVDRVGLNTEGKAPFDLAEHFMLAQGVDINGEAETFAAGEINAGSELRSKNPLLSLFGRWGLSGKAGIGNAIPTGDNQWAMFGGGARAIMFERNENLMDYLETDQVDRLERLLEEQAEASVDISQIKSEQDAIKKEMKSADKDAKAELQIKLKVLDEKIQARKDQKQESRESIRRPIDPYEAFITGAELSHRMSIKNATDEEAGLFISALIRFAAEPRFGGHANHNCGLVEANWTVTTWKPGELVPVTLGEISITPNGVNIKGDELTAMVKAFNDNQSFDFTTR
>NZ_CP024641.1|WP_080932150.1|149065_149773_+|hypothetical-protein
MLNLKPYRVIMSSLTPVVISGIAPSLDGILYEALSQVIPSNEPDTVLARLKEILLFNDELGVFHASSLRFGITPEQGIGATSSVRCDYLGDEKLSSAMFSPRSRAGKFTRVITTGGPTKKRMTTRPAYSAPYLTFDFVGDDESVEILLNHAHVGVGYDYFSAANGEFNNVMIIPLDCDTSISFEGMATRPVPVNKGLDGIRGVSPLVPPYFIGDKTSVVYPAPVRTQLISALLRG
>NZ_CP024641.1|WP_080932148.1|147197_149072_+|DEAD/DEAH-box-helicase
MDTAACFTSAGLSLRKVQQDFIEAAGLGLNVQNKLALLSAETGVGKTLGYLVPAMQILVKNPGAKFVIATNSHALMHQIFRSDRLSLERMAEEAGIKVTFSRLMGKASYISPDKVRELLRVSDTYDSETVQLLEKLRGWSKPLVEFEEEYGELPTLIKPDMVTFSFWDDIQNVNDIRREALNADFIVTTHAMVMIDCLCNHGILGDKENLYLIVDEADMFVDMLEVWKQRRFNLRELLSSFSAYIPRTGVEIIKQLESDITKIAGGLHFCSTPEAVELFDRSFKALAMVGRKIKDEEPRKSFFDCIYRWEMLGMSGGQKGIGVSKVRYEPALIAVNPFIGMNLGRYCTQWRSALLTSATLAITNTPEGGMEWLCKTLALNDDMVSIKRIFAPESYGTMTLTIAGAAFPKVFSDPKEQEFSSKWLAAVTDQLSRMPGPVLVLTASHSETRAIAGQLGEVSQPVYIQLAGQPLSEIIKLYQQKPGILISAGASVGLSPRGEHGEQIFHDLLITRIPFSPPDRMKVESLYGYLKDRGYGRTLESVQRSIYLENLRKVIRKGKQSVGRGIRSENDSVRIMILDPRFPEPADLSSKHRSLEHIIPVRFRREYRSCEILSPAHCEEDIQC
>NZ_CP024641.1|WP_064371373.1|146622_147195_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MIFYDNAFRLRIPHTSIYRIHQHLDFFVQERKGEKLPYSFKILPGTANDAQLLVRTASPLGLPGEKPRELTLSEGDGISFITSMAIFHKANQTEGTGRRQYAPSDDKKHDLAVNKIINAGFEPDHIVVGGAEIVHVGKGNSGRGFTLPVFTIQGTVVVSNKQEAEKAIVFGIGPKRVFGCGFMHLTGQGL
>NZ_CP024641.1|WP_169516759.1|146089_146620_+|hypothetical-protein
MWSGVGAVINLENNSAVLLAPQGVVNKLPTHFFEAVNVVTATSGQHLEYLFNTNLKFPIIYIQNFGVKTYELIRSLRVSLSGDAIFTCADQLMTTQNEVLFTLDLNKAKELHLEMQNYSKKEIDAFIRTVTQLAFSRITPEAASNQFKKDNLIPLLQLLPTDPHQRLSILRLLKKV
>NZ_CP024641.1|WP_009654200.1|145164_145653_+|hypothetical-protein
MKRDNALPALVKANVENYRGAIALYLKQTEDNALVFIIGEAGAGKSYLAKLELPNALYPTPQQFAECDHISTMFTGFDVVIDDILRFDSDKVIECIQAVHASGHRVMVTGQPVDLELCTGLLSRLPVGYRTMFSTLMGHSDLQEMKGKDNSVEPPKTGPVLH
>NZ_CP024641.1|WP_009654235.1|144696_145107_+|hypothetical-protein
MSSDGVELSSIWEAGSWFPVRAFGILLLVMLFLMIVFGVFRKDFSHLKPLLTLFVLLIALGGTILFTTLFFSAKNKNEAEWRDWAKDHCKIVAKKDGSTTTGVGISLKGQAGLFIGGEPGQTGYSCDDGVTYWKND
>NZ_CP024641.1|WP_042928373.1|144253_144673_+|hypothetical-protein
MTDTNNQERNGSKFLFGVTSTDRIIQTEQGDGFINSCIAAHGIITKIILTSYRAAGALTEMVLFNEQGATFVITIESGVFTPSGLVLTDEDIQIAHKQITLSDTTDILILATRMARRAGLKPVFPEQSEFSSILEFTVN
>NZ_CP024641.1|WP_009654202.1|144078_144261_+|hypothetical-protein
MADFASTKQNSSFELWFEQLQILAELNGDVAGEKADWVQAYEAGMAVDSAYYEAFGDSDD
>NZ_CP024641.1|WP_009654205.1|143663_144086_+|hypothetical-protein
MNFIKLIILFAVVALLVYGFSGLSGKDSVAFTFLSFGFSAVIAAFFWIMIVLLVALYLFASSSISIYPKMLFLEGTLFGWWYFVFNFLIPDGQSLTLLGVNIYNLGGYFIYGTTVLIGIGIVMMMFRRSTNQVDKVKKHG
>NZ_CP024641.1|WP_052544865.1|152030_152447_-|hypothetical-protein
MKMKPIILTIMSGLLLTGCDQVKDSVDNYVKQVFLMDDAFKLPSIVISPGWRINDHGSIAEVYGNKDCPTLFGDDIRSGCIVIDPEDETVRAFIVKANSGREEVVKEVWIVEHRGEFPHVNFRLKRPDNSYVTPWHQA
>NZ_CP024641.1|WP_042928382.1|152750_153173_+|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MFLIPKDNPEVIALPLFVDRCAAGFPSPAQDYTSSELDLNDYCIRHPSATYFVRAQGNSMQDVGMRDGDLLVVDRSLRPQNRDIVIAEVDGGFTVKQLQTTPELALLPMNNAYSPIFPNPDELTIFGVVTHWVHRARGNI
>NZ_CP024641.1|WP_104022015.1|155075_156137_-|IS481-like-element-ISKpn28-family-transposase
MLMQHIGVGYFGYYRATAYAMKHSLMPEIAKLRMKALNFWDKHGIRAAADAFDVSTRTLYWWRRLLRTGGPEALIPRSKAPLVRRSRHWHPDVLKEIRRLRTELPNLGKEQIFVRLKPWCEARHFTCPSTSTIGRIIAGAHDKMRMIPVRLSARGKARLIKKRSVKPRRPKQYRPVKTGELIGMDAIELRMGDLRRYIITMIDEHSDYALALAVPSLNSDITSHFFSKATKLFPVAIRQVVTDNGKEFLGNFDKTLQEASIKHIWTYPYTPKMNATCERFNRTLREQFIEFNELLLFEDLNLFNQRMAEYLVLYNSKRPHKSLELMTPVDYILRESKNCNMWWTHTTSLQIAR
>NZ_CP024641.1|WP_017900895.1|156208_156370_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MKLPRNALIWCVLIVCITLLIFTCLTRNRLCELRLKDGDREVAASLAYESNGK
>NZ_CP024641.1|WP_009653224.1|156577_156838_-|hypothetical-protein
MTLTAYYQLKNTKNAGLGIELLDSEAAAFIVLEECSYEKPNEIARYGHNGTAGDRSNAFSCAMNKALSSQNYSGAMCDYNVYEETA
>NZ_CP024641.1|WP_009653249.1|157375_158347_+|hypothetical-protein
MTTTQLITAAENEDVFANIMTTLVELAKHEGDFMLHDAICRAEIDIDEDKFYSMIGGHRQSAAQCVRLLRRCGAITSKAVYDLASNVERLALRLARDEWLRDMPFPLKSLAFYQDEATAKRESYLVNQKEKQYRFSVYVTGRVEYPEDDPMQGTYITDGTFLLGKAQTVADALERAKEAAMRGEWNERGEEEDSYDPWMCRDCGPVSFYERTIEIRDENERLVVAGNACNLEWYGHVASLEEIRRIEEQQKALYEKASYESGWDNYETARQLRQEAEQLSVGIVDEYWRNHPDVIKAVEEFNYPAFMDEEAIAFNADEDMGIE
>NZ_CP024641.1|WP_014839919.1|158707_159085_-|hypothetical-protein
MMKFLKVAGISVLALAVFIAALIAWYWLDARASLQADIRACPSVTTEQATAAVLKNVLLNGERLFSKPHLTQKDVIIEERGVQVGQTGTLVPFRIDGVTDRRYFGMTGCASLDAVEYATEYYTEP
>NZ_CP024641.1|WP_062878109.1|160618_160834_+|hypothetical-protein
MGIKFHDFRDDRQTFDRGEWQATIDMNKWLEDKNIDVISVETIFEVSGSMASTSSRFEAIRLWYKEVSPSV
>NZ_CP024641.1|WP_062878110.1|160928_161183_+|hypothetical-protein
MSKSVDQKSRIYPSVGFFIVTLIPCIMGLALYFMAPYILSAEDLAFVENLPLLALSLFLLFAAVSGVLSGALQHAKLLKTAKKK
>NZ_CP024641.1|WP_062878111.1|161255_161603_+|hypothetical-protein
MYSRFMNDPLDEKYLLSPGISDSYADGEIPAEEIDVRDALIRFKVKGDQALSMNLFHRLFHYQRYREVRASFDKSRLTLVDVVNRSPFHKAAMRRIYSDFPEQSIARRVLVDFVR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024641_1	1.1\|150905\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150905-150936	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	14065-14096	0	1.0
NZ_CP024641_1	1.1\|150905\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150905-150936	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	150905-150936	0	1.0
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245022-245053	0	1.0
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	14004-14035	0	1.0
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	150966-150997	0	1.0
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13943-13974	0	1.0
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151027-151058	0	1.0
NZ_CP024641_1	1.4\|151088\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151088-151119	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13882-13913	0	1.0
NZ_CP024641_1	1.4\|151088\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151088-151119	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151088-151119	0	1.0
NZ_CP024641_1	1.5\|151149\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151149-151180	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245144-245175	0	1.0
NZ_CP024641_1	1.5\|151149\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151149-151180	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13821-13852	0	1.0
NZ_CP024641_1	1.5\|151149\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151149-151180	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151149-151180	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245205-245236	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13760-13791	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP035551	Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_3.0, complete sequence	1468-1499	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP016527	Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_3, complete sequence	559-590	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151210-151241	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP011316	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-4, complete sequence	2533-2564	0	1.0
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP033779	Klebsiella pneumoniae strain FDAARGOS_531 plasmid unnamed5	475-506	0	1.0
NZ_CP024641_1	1.7\|151271\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151271-151302	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245266-245297	0	1.0
NZ_CP024641_1	1.7\|151271\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151271-151302	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13699-13730	0	1.0
NZ_CP024641_1	1.7\|151271\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151271-151302	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151271-151302	0	1.0
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245327-245359	0	1.0
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13637-13669	0	1.0
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151332-151364	0	1.0
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245389-245420	0	1.0
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13576-13607	0	1.0
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151394-151425	0	1.0
NZ_CP024641_1	1.10\|151455\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151455-151486	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245450-245481	0	1.0
NZ_CP024641_1	1.10\|151455\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151455-151486	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13515-13546	0	1.0
NZ_CP024641_1	1.10\|151455\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151455-151486	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151455-151486	0	1.0
NZ_CP024641_1	1.11\|151516\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151516-151547	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245511-245542	0	1.0
NZ_CP024641_1	1.11\|151516\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151516-151547	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13454-13485	0	1.0
NZ_CP024641_1	1.11\|151516\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151516-151547	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151516-151547	0	1.0
NZ_CP024641_1	1.12\|151577\|32\|NZ_CP024641\|CRT	151577-151608	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245572-245603	0	1.0
NZ_CP024641_1	1.12\|151577\|32\|NZ_CP024641\|CRT	151577-151608	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13393-13424	0	1.0
NZ_CP024641_1	1.12\|151577\|32\|NZ_CP024641\|CRT	151577-151608	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151577-151608	0	1.0
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	MN175386	Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence	245633-245664	0	1.0
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_KX839207	Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence	13332-13363	0	1.0
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP041249	Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence	44732-44763	0	1.0
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP024641	Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence	151638-151669	0	1.0
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP025945	Escherichia coli strain SCEC020023 plasmid p1_020023, complete sequence	7269-7300	1	0.969
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP024491	Klebsiella pneumoniae strain INF249 plasmid unnamed2, complete sequence	2984-3015	1	0.969
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP038459	Escherichia coli strain EC-129 plasmid pEC129_6, complete sequence	2940-2971	1	0.969
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP050824	Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-2, complete sequence	4419-4450	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_KP125893	Klebsiella pneumoniae subsp. pneumoniae strain HS08204 plasmid pHS08204, complete sequence	5167-5198	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP042506	Leclercia adecarboxylata strain E1 plasmid pE1_001, complete sequence	175313-175344	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP043854	Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid unnamed1, complete sequence	6007-6038	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP044215	Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence	255543-255574	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP042494	Leclercia adecarboxylata strain E61 plasmid pE61_001, complete sequence	175313-175344	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP043767	Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid pIMPIncH12_331kb, complete sequence	70653-70684	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP042525	Citrobacter freundii strain E11 plasmid pE11_001, complete sequence	175313-175344	1	0.969
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	NZ_CP026716	Klebsiella oxytoca strain AR_0028 plasmid unitig_1_pilon, complete sequence	181248-181279	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP026049	Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence	148870-148901	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP022274	Citrobacter freundii strain 18-1 plasmid pA18-1, complete sequence	140055-140086	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP032832	Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence	279084-279115	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP008842	Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence	160701-160732	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP034130	Klebsiella quasipneumoniae strain G4584 plasmid pG4584_218.9Kb, complete sequence	28824-28855	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP042546	Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence	56530-56561	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP013339	Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence	28198-28229	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP034138	Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_218.9Kb, complete sequence	28819-28850	1	0.969
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	271143-271174	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP026049	Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence	2610-2641	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP026276	Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence	125344-125375	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP008842	Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence	59086-59117	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP042546	Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence	153500-153531	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP013339	Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence	93867-93898	1	0.969
NZ_CP024641_1	1.13\|151638\|32\|NZ_CP024641\|CRT	151638-151669	32	NZ_CP036439	Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence	1489-1520	1	0.969
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP019902	Raoultella planticola strain GODA plasmid unnamed3, complete sequence	4174-4205	2	0.938
NZ_CP024641_1	1.2\|150966\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	150966-150997	32	NZ_CP011627	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-14, complete sequence	11741-11772	2	0.938
NZ_CP024641_1	1.7\|151271\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151271-151302	32	CP052535	Klebsiella pneumoniae strain B16KP0157 plasmid pB16KP0157-2, complete sequence	65919-65950	2	0.938
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP026278	Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence	16660-16692	2	0.939
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK448237	Klebsiella phage ST974-OXA48phi18.2, complete genome	27413-27445	2	0.939
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KY271399	Klebsiella phage 5 LV-2017, complete genome	20622-20654	2	0.939
NZ_CP024641_1	1.11\|151516\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151516-151547	32	NZ_CP013339	Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence	29168-29199	3	0.906
NZ_CP024641_1	1.11\|151516\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151516-151547	32	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	272113-272144	3	0.906
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MN098328	Stenotrophomonas phage Mendera, complete genome	82008-82040	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	10159-10191	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_004604	Bacillus megaterium QM B1551 plasmid pBM400, complete sequence	46715-46747	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	70505-70537	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	1124-1156	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	76111-76143	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP053575	Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence	87833-87865	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP041068	Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence	36479-36511	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_021742	Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence	864-896	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	CP041516	Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence	17609-17641	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1075230-1075262	7	0.788
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	1059-1091	7	0.788
NZ_CP024641_1	1.3\|151027\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151027-151058	32	CP008939	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence	22617-22648	8	0.75
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP023549	Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence	255959-255991	8	0.758
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1553955-1553987	8	0.758
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1667622-1667654	8	0.758
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2324913-2324945	8	0.758
NZ_CP024641_1	1.4\|151088\|32\|NZ_CP024641\|PILER-CR,CRISPRCasFinder,CRT	151088-151119	32	NZ_CP021649	Acidovorax sp. T1 plasmid p1-T1, complete sequence	182565-182596	9	0.719
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	904222-904254	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1587277-1587309	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2547523-2547555	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KX781992	Mycobacterium phage Gabriel, complete genome	92868-92900	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MH697579	Mycobacterium phage Cane17, complete genome	95313-95345	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK359311	Mycobacterium phage SmallFry, complete genome	93117-93149	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK112541	Mycobacterium phage Jessibeth14, complete genome	94208-94240	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_023714	Mycobacterium phage LinStu, complete genome	93857-93889	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK359358	Mycobacterium phage Essence, complete genome	93477-93509	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KT321476	Mycobacterium phage Zeenon, complete genome	93849-93881	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KX721255	Mycobacterium phage Yucca, complete genome	93763-93795	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MH779498	Mycobacterium phage Bread, complete genome	93611-93643	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MT889395	Mycobacterium phage Shifa, complete genome	93144-93176	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK359318	Mycobacterium phage Specks, complete genome	95466-95498	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	JF704116	Mycobacterium phage Drazdys, complete genome	93918-93950	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_023696	Mycobacterium phage Dandelion, complete genome	97363-97395	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK359349	Mycobacterium phage FoxtrotP1, complete genome	95120-95152	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MH727558	Mycobacterium phage Salacia, complete genome	94177-94209	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	GQ303260	Mycobacterium phage ET08, complete genome	92998-93030	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MH744422	Mycobacterium phage Roots515, complete genome	95392-95424	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MH669008	Mycobacterium phage Megamind, complete genome	93697-93729	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK878897	Mycobacterium phage Blackbrain, complete genome	93130-93162	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KT365398	Mycobacterium phage DTDevon, complete genome	95375-95407	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_028869	Mycobacterium phage HyRo, complete genome	93175-93207	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MG872839	Mycobacterium phage LifeSavor, complete genome	93736-93768	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KC748970	Mycobacterium phage ArcherS7, complete genome	93881-93913	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	NC_028986	Mycobacterium phage Alice, complete sequence	93211-93243	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	JN204348	Mycobacterium phage Sebata, complete genome	95064-95096	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	MK450423	Mycobacterium phage Stubby, complete genome	93221-93253	9	0.727
NZ_CP024641_1	1.8\|151332\|33\|NZ_CP024641\|CRISPRCasFinder,CRT	151332-151364	33	KX752698	Mycobacterium phage Tonenili, complete genome	98207-98239	9	0.727
NZ_CP024641_1	1.9\|151394\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151394-151425	32	MT708547	Klebsiella phage Muenster, complete genome	293938-293969	9	0.719
NZ_CP024641_1	1.6\|151210\|32\|NZ_CP024641\|CRISPRCasFinder,CRT	151210-151241	32	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	239994-240025	10	0.688

1. spacer 1.1|150905|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

cggaatttcacctgtccgggcataggaattta	CRISPR spacer
cggaatttcacctgtccgggcataggaattta	Protospacer
********************************

2. spacer 1.1|150905|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cggaatttcacctgtccgggcataggaattta	CRISPR spacer
cggaatttcacctgtccgggcataggaattta	Protospacer
********************************

3. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagaccgcgcactctg	Protospacer
********************************

4. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagaccgcgcactctg	Protospacer
********************************

5. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagaccgcgcactctg	Protospacer
********************************

6. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccttgaataggccataaatttctgcgt	Protospacer
********************************

7. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccttgaataggccataaatttctgcgt	Protospacer
********************************

8. spacer 1.4|151088|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

atcagcgccagggcatgcttttttctcgttga	CRISPR spacer
atcagcgccagggcatgcttttttctcgttga	Protospacer
********************************

9. spacer 1.4|151088|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

atcagcgccagggcatgcttttttctcgttga	CRISPR spacer
atcagcgccagggcatgcttttttctcgttga	Protospacer
********************************

10. spacer 1.5|151149|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

tctccgttaacagtttcatcgccaaggactgt	CRISPR spacer
tctccgttaacagtttcatcgccaaggactgt	Protospacer
********************************

11. spacer 1.5|151149|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

tctccgttaacagtttcatcgccaaggactgt	CRISPR spacer
tctccgttaacagtttcatcgccaaggactgt	Protospacer
********************************

12. spacer 1.5|151149|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tctccgttaacagtttcatcgccaaggactgt	CRISPR spacer
tctccgttaacagtttcatcgccaaggactgt	Protospacer
********************************

13. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

14. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

15. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP035551 (Salmonella enterica subsp. enterica serovar Typhimurium strain YU07-18 plasmid pYU07-18_3.0, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

16. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP016527 (Salmonella enterica subsp. enterica serovar Heidelberg strain 09-036813-1A plasmid p09-036813-1A_3, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

17. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

18. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP011316 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-4, complete sequence) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

19. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP033779 (Klebsiella pneumoniae strain FDAARGOS_531 plasmid unnamed5) position: , mismatch: 0, identity: 1.0

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
taggcagaaatgacctggatgagcgaggttat	Protospacer
********************************

20. spacer 1.7|151271|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcccatttgcggcgctgttgccaaaacgcg	CRISPR spacer
tgtcccatttgcggcgctgttgccaaaacgcg	Protospacer
********************************

21. spacer 1.7|151271|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcccatttgcggcgctgttgccaaaacgcg	CRISPR spacer
tgtcccatttgcggcgctgttgccaaaacgcg	Protospacer
********************************

22. spacer 1.7|151271|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tgtcccatttgcggcgctgttgccaaaacgcg	CRISPR spacer
tgtcccatttgcggcgctgttgccaaaacgcg	Protospacer
********************************

23. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctacctgctgagcttaaccagca	Protospacer
*********************************

24. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctacctgctgagcttaaccagca	Protospacer
*********************************

25. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctacctgctgagcttaaccagca	Protospacer
*********************************

26. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattctgttcagttgca	Protospacer
********************************

27. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattctgttcagttgca	Protospacer
********************************

28. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattctgttcagttgca	Protospacer
********************************

29. spacer 1.10|151455|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

tccacaaccagatcataaaatctccttcccga	CRISPR spacer
tccacaaccagatcataaaatctccttcccga	Protospacer
********************************

30. spacer 1.10|151455|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccacaaccagatcataaaatctccttcccga	CRISPR spacer
tccacaaccagatcataaaatctccttcccga	Protospacer
********************************

31. spacer 1.10|151455|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tccacaaccagatcataaaatctccttcccga	CRISPR spacer
tccacaaccagatcataaaatctccttcccga	Protospacer
********************************

32. spacer 1.11|151516|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

tagactaaatatggggcgacgacctcgccaca	CRISPR spacer
tagactaaatatggggcgacgacctcgccaca	Protospacer
********************************

33. spacer 1.11|151516|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

tagactaaatatggggcgacgacctcgccaca	CRISPR spacer
tagactaaatatggggcgacgacctcgccaca	Protospacer
********************************

34. spacer 1.11|151516|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tagactaaatatggggcgacgacctcgccaca	CRISPR spacer
tagactaaatatggggcgacgacctcgccaca	Protospacer
********************************

35. spacer 1.12|151577|32|NZ_CP024641|CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtatgaccgggttccacctggtgtctggaa	CRISPR spacer
ttgtatgaccgggttccacctggtgtctggaa	Protospacer
********************************

36. spacer 1.12|151577|32|NZ_CP024641|CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtatgaccgggttccacctggtgtctggaa	CRISPR spacer
ttgtatgaccgggttccacctggtgtctggaa	Protospacer
********************************

37. spacer 1.12|151577|32|NZ_CP024641|CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgtatgaccgggttccacctggtgtctggaa	CRISPR spacer
ttgtatgaccgggttccacctggtgtctggaa	Protospacer
********************************

38. spacer 1.13|151638|32|NZ_CP024641|CRT matches to MN175386 (Klebsiella pneumoniae strain KP-13-14 plasmid pKP-13-14-NDM-9, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagtcccgcttccctgtat	Protospacer
********************************

39. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_KX839207 (Klebsiella pneumoniae strain KP1814 plasmid pKP1814-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagtcccgcttccctgtat	Protospacer
********************************

40. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP041249 (Raoultella electrica strain DSM 102253 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagtcccgcttccctgtat	Protospacer
********************************

41. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP024641 (Klebsiella michiganensis strain F107 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagtcccgcttccctgtat	Protospacer
********************************

42. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025945 (Escherichia coli strain SCEC020023 plasmid p1_020023, complete sequence) position: , mismatch: 1, identity: 0.969

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagcccgcgcactctg	Protospacer
******************* ************

43. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024491 (Klebsiella pneumoniae strain INF249 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagactgcgcactctg	Protospacer
*********************.**********

44. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038459 (Escherichia coli strain EC-129 plasmid pEC129_6, complete sequence) position: , mismatch: 1, identity: 0.969

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagcccgcgcactctg	Protospacer
******************* ************

45. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050824 (Klebsiella pneumoniae strain Bckp091 plasmid pBckp091-2, complete sequence) position: , mismatch: 1, identity: 0.969

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagcccgcgcactctg	Protospacer
******************* ************

46. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP125893 (Klebsiella pneumoniae subsp. pneumoniae strain HS08204 plasmid pHS08204, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

47. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042506 (Leclercia adecarboxylata strain E1 plasmid pE1_001, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

48. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043854 (Enterobacter hormaechei strain EB_P6_L3_02.19 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

49. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044215 (Klebsiella aerogenes strain KA_P10_L5_03.19 plasmid pIMPIncH12_334kb, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

50. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042494 (Leclercia adecarboxylata strain E61 plasmid pE61_001, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

51. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043767 (Enterobacter hormaechei strain EB_P9_L5_03.19 plasmid pIMPIncH12_331kb, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

52. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042525 (Citrobacter freundii strain E11 plasmid pE11_001, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

53. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026716 (Klebsiella oxytoca strain AR_0028 plasmid unitig_1_pilon, complete sequence) position: , mismatch: 1, identity: 0.969

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
cgcatccctgaataggccataaatttctgcgt	Protospacer
*******.************************

54. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP026049 (Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

55. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP022274 (Citrobacter freundii strain 18-1 plasmid pA18-1, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

56. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP032832 (Klebsiella pneumoniae strain INF078 plasmid pINF078-VP, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattttgttcagttgca	Protospacer
*******************.************

57. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP008842 (Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

58. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP034130 (Klebsiella quasipneumoniae strain G4584 plasmid pG4584_218.9Kb, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatgccaattctgttcagttgca	Protospacer
************ *******************

59. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP042546 (Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

60. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP013339 (Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

61. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP034138 (Klebsiella quasipneumoniae subsp. similipneumoniae strain G747 plasmid pG747_218.9Kb, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatgccaattctgttcagttgca	Protospacer
************ *******************

62. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 1, identity: 0.969

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
catatcaatgatcccaattcagttcagttgca	Protospacer
******************** ***********

63. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP026049 (Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

64. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP026276 (Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

65. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP008842 (Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

66. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP042546 (Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

67. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP013339 (Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

68. spacer 1.13|151638|32|NZ_CP024641|CRT matches to NZ_CP036439 (Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.969

ttcttcagcgcgtcagtcccgcttccctgtat	CRISPR spacer
ttcttcagcgcgtcagttccgcttccctgtat	Protospacer
*****************.**************

69. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019902 (Raoultella planticola strain GODA plasmid unnamed3, complete sequence) position: , mismatch: 2, identity: 0.938

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgagaaggcgcactctg	Protospacer
********************  **********

70. spacer 1.2|150966|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011627 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-14, complete sequence) position: , mismatch: 2, identity: 0.938

tatttagtcaaaccatgagaccgcgcactctg	CRISPR spacer
tatttagtcaaaccatgaggctgcgcactctg	Protospacer
*******************.*.**********

71. spacer 1.7|151271|32|NZ_CP024641|CRISPRCasFinder,CRT matches to CP052535 (Klebsiella pneumoniae strain B16KP0157 plasmid pB16KP0157-2, complete sequence) position: , mismatch: 2, identity: 0.938

tgtcccatttgcggcgctgttgccaaaacgcg	CRISPR spacer
tgtcccatttgcggtgccgttgccaaaacgcg	Protospacer
**************.**.**************

72. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP026278 (Klebsiella oxytoca strain KONIH2 plasmid pKOR-0e8e, complete sequence) position: , mismatch: 2, identity: 0.939

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctacctgctgagctaaatcagca	Protospacer
************************ **.*****

73. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK448237 (Klebsiella phage ST974-OXA48phi18.2, complete genome) position: , mismatch: 2, identity: 0.939

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccttctgagctaaaccagca	Protospacer
**************** ******* ********

74. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KY271399 (Klebsiella phage 5 LV-2017, complete genome) position: , mismatch: 2, identity: 0.939

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctacctactgagctaaaccagca	Protospacer
****************.******* ********

75. spacer 1.11|151516|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP013339 (Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence) position: , mismatch: 3, identity: 0.906

tagactaaatatggggcgacgacctcgccaca	CRISPR spacer
tagactaaagatggggcgacgacctcgcccct	Protospacer
********* ******************* *

76. spacer 1.11|151516|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 3, identity: 0.906

tagactaaatatggggcgacgacctcgccaca	CRISPR spacer
tagactaaagatggggcgacgacctcgcccct	Protospacer
********* ******************* *

77. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MN098328 (Stenotrophomonas phage Mendera, complete genome) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagct--taaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaacagcccg--	Protospacer
************ ** ********  .*.** *

78. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

79. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_004604 (Bacillus megaterium QM B1551 plasmid pBM400, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

80. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

81. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

82. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

83. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP053575 (Citrobacter sp. TSA-1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatagcccca	Protospacer
************ ** ********  * *  **

84. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

85. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_021742 (Serratia liquefaciens ATCC 27592 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatagcccca	Protospacer
************ ** ********  * *  **

86. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

87. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatagcccca	Protospacer
************ ** ********  * *  **

88. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 7, identity: 0.788

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctaaggcccca	Protospacer
************ ** ******** *. *  **

89. spacer 1.3|151027|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to CP008939 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00003, complete sequence) position: , mismatch: 8, identity: 0.75

cgcatccttgaataggccataaatttctgcgt	CRISPR spacer
atggttcttgaatagggcataaattactgcct	Protospacer
   .*.********** ******** **** *

90. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP023549 (Rhodobacter sp. CZR27 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggtgctctaccagctgagctacgtccgcg	Protospacer
******.******** ********  ..* **.

91. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggcccca	Protospacer
************ ** ********  . *  **

92. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggcccca	Protospacer
************ ** ********  . *  **

93. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggcccca	Protospacer
************ ** ********  . *  **

94. spacer 1.4|151088|32|NZ_CP024641|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 9, identity: 0.719

atcagcgccagggcatgcttttttctcgttga	CRISPR spacer
cgaagcgcaagggcacgcttttttctgttttt	Protospacer
   ***** ******.**********  **

95. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggccccg	Protospacer
************ ** ********  . *  *.

96. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggccccg	Protospacer
************ ** ********  . *  *.

97. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctcccagctgagctatggccccg	Protospacer
************ ** ********  . *  *.

98. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KX781992 (Mycobacterium phage Gabriel, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

99. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MH697579 (Mycobacterium phage Cane17, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

100. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK359311 (Mycobacterium phage SmallFry, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

101. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK112541 (Mycobacterium phage Jessibeth14, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

102. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_023714 (Mycobacterium phage LinStu, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

103. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK359358 (Mycobacterium phage Essence, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

104. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KT321476 (Mycobacterium phage Zeenon, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

105. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KX721255 (Mycobacterium phage Yucca, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

106. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MH779498 (Mycobacterium phage Bread, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

107. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MT889395 (Mycobacterium phage Shifa, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

108. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK359318 (Mycobacterium phage Specks, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

109. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to JF704116 (Mycobacterium phage Drazdys, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

110. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_023696 (Mycobacterium phage Dandelion, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

111. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK359349 (Mycobacterium phage FoxtrotP1, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

112. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MH727558 (Mycobacterium phage Salacia, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

113. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to GQ303260 (Mycobacterium phage ET08, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

114. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MH744422 (Mycobacterium phage Roots515, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

115. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MH669008 (Mycobacterium phage Megamind, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

116. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK878897 (Mycobacterium phage Blackbrain, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

117. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KT365398 (Mycobacterium phage DTDevon, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

118. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_028869 (Mycobacterium phage HyRo, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

119. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MG872839 (Mycobacterium phage LifeSavor, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

120. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KC748970 (Mycobacterium phage ArcherS7, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

121. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to NC_028986 (Mycobacterium phage Alice, complete sequence) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

122. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to JN204348 (Mycobacterium phage Sebata, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

123. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to MK450423 (Mycobacterium phage Stubby, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

124. spacer 1.8|151332|33|NZ_CP024641|CRISPRCasFinder,CRT matches to KX752698 (Mycobacterium phage Tonenili, complete genome) position: , mismatch: 9, identity: 0.727

ggcaggcgctctacctgctgagcttaaccagca	CRISPR spacer
ggcaggcgctctaccagatgagctataggcccg	Protospacer
*************** * ******  *    *.

125. spacer 1.9|151394|32|NZ_CP024641|CRISPRCasFinder,CRT matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 9, identity: 0.719

catatcaatgatcccaattctgttcagttgca	CRISPR spacer
actcatgattatcccaattctcttcagttgga	Protospacer
  *  ..** *********** ******** *

126. spacer 1.6|151210|32|NZ_CP024641|CRISPRCasFinder,CRT matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 10, identity: 0.688

taggcagaaatgacctggatgagcgaggttat	CRISPR spacer
attccagaaatgccctggatgagctaggcgtg	Protospacer
    ******** *********** ***.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

12192 : 53834

Salmonella_phage(28.57%)

integrase,transposase

attL 41370:41429|attR 42786:42908

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_161505297.1\|12192_13161_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.4
WP_102046707.1\|13202_15113_+	hypothetical protein	NA	NA	NA	NA
WP_017901136.1\|15185_15416_+	hypothetical protein	NA	NA	NA	NA
WP_024266351.1\|15525_16770_+	toprim domain-containing protein	A0A0H5AWB1	Pseudomonas_phage	1.5e-08	25.5
WP_017901134.1\|16840_17380_+	hypothetical protein	NA	NA	NA	NA
WP_017901133.1\|17522_17741_+	hypothetical protein	NA	NA	NA	NA
WP_017901132.1\|17733_18342_+	hypothetical protein	NA	NA	NA	NA
WP_017901131.1\|18328_18571_+	hypothetical protein	NA	NA	NA	NA
WP_017901130.1\|18639_19083_+	hypothetical protein	NA	NA	NA	NA
WP_014839936.1\|19541_20501_+	DNA replication protein	NA	NA	NA	NA
WP_014839935.1\|20497_21253_+	hypothetical protein	NA	NA	NA	NA
WP_014839934.1\|21252_21576_+	hypothetical protein	NA	NA	NA	NA
WP_024266349.1\|21579_22638_+	hypothetical protein	NA	NA	NA	NA
WP_024266348.1\|22673_22991_+	hypothetical protein	NA	NA	NA	NA
WP_014839933.1\|23051_24185_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_017900677.1\|24358_24613_+	transcriptional regulator	NA	NA	NA	NA
WP_049593898.1\|24699_25761_+	hypothetical protein	NA	NA	NA	NA
WP_014839932.1\|26657_27542_-	hypothetical protein	A0A1B0VDL5	Salmonella_phage	9.8e-50	41.1
WP_017900953.1\|28113_28719_-	hypothetical protein	NA	NA	NA	NA
WP_014839931.1\|29306_29648_+	hypothetical protein	NA	NA	NA	NA
WP_000427614.1\|29976_30981_-\|transposase	IS110-like element IS5075 family transposase	NA	NA	NA	NA
WP_001138073.1\|31059_34032_-\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.1
WP_001162012.1\|34034_34592_-	recombinase family protein	A0A1B0V7I5	Salmonella_phage	5.8e-48	81.3
WP_000845048.1\|34888_35902_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_063840321.1\|36193_36748_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_001334766.1\|36878_37709_+	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA
WP_000186237.1\|37846_38479_+	type B-3 chloramphenicol O-acetyltransferase CatB3	A0A2R8FE91	Brazilian_cedratvirus	4.1e-26	41.2
WP_001749986.1\|38563_39016_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_000679427.1\|39238_39586_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000259031.1\|39579_40419_+	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000376623.1\|40546_41047_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
41370:41429	attL	NA	NA	NA	NA
WP_001389365.1\|41553_42318_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_001375131.1\|42381_42639_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A077SL39	Escherichia_phage	8.9e-12	61.9
WP_000993245.1\|42876_43089_-	DUF3330 domain-containing protein	NA	NA	NA	NA
42786:42908	attR	NA	NA	NA	NA
WP_001087807.1\|43154_43391_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277466.1\|43387_43753_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000209296.1\|43770_45456_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	1.8e-39	29.1
WP_000522996.1\|45494_45920_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732275.1\|45947_46223_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294656.1\|46238_46604_-	mercuric ion transporter MerT	NA	NA	NA	NA
WP_001166628.1\|46675_47131_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_017901326.1\|47261_47801_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_017901327.1\|47797_47989_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_017901328.1\|48167_48641_-	tellurium resistance protein TerW	NA	NA	NA	NA
WP_001067855.1\|49259_49964_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000046891.1\|50837_51173_-	thermonuclease family protein	G8DH70	Emiliania_huxleyi_virus	2.8e-05	35.7
WP_001515734.1\|51415_51979_+\|transposase	transposase	NA	NA	NA	NA
WP_001348195.1\|52043_52418_+	cupin domain-containing protein	NA	NA	NA	NA
WP_001097412.1\|52441_53005_+	chlorite dismutase family protein	NA	NA	NA	NA
WP_001067855.1\|53129_53834_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

DBSCAN-SWA_2

129839 : 143559

Salmonella_phage(53.85%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014839967.1\|129839_130160_+	hypothetical protein	J9Q750	Salmonella_phage	8.2e-31	53.8
WP_087525964.1\|130841_131045_+	hypothetical protein	K7PLX1	Enterobacteria_phage	1.4e-15	62.7
WP_025999286.1\|131087_131699_+	hypothetical protein	NA	NA	NA	NA
WP_014839969.1\|131763_132009_+	hypothetical protein	S5MQM0	Escherichia_phage	6.1e-18	65.8
WP_087525963.1\|132336_133071_+	hypothetical protein	A0A1V0E5L5	Salmonella_phage	9.4e-14	36.3
WP_014839970.1\|133336_133561_+	hypothetical protein	B1GS76	Salmonella_phage	2.3e-08	51.2
WP_017900705.1\|133564_134638_+	hypothetical protein	A6N3G8	Burkholderia_virus	1.1e-18	56.8
WP_017900703.1\|135054_135462_+	hypothetical protein	H6WRY2	Salmonella_phage	3.5e-18	56.1
WP_017900702.1\|135458_135743_+	hypothetical protein	NA	NA	NA	NA
WP_014839971.1\|136232_136445_+	hypothetical protein	J9Q804	Salmonella_phage	3.0e-13	50.0
WP_017900701.1\|136701_137334_+	hypothetical protein	A0A1V0E5L6	Salmonella_phage	1.5e-28	55.9
WP_017900700.1\|137373_137895_+	DUF262 domain-containing protein	A0A2H4FWH2	Salmonella_phage	5.4e-64	68.5
WP_009654227.1\|137987_138275_+	hypothetical protein	NA	NA	NA	NA
WP_009654204.1\|138527_138848_+	hypothetical protein	NA	NA	NA	NA
WP_017900698.1\|138937_139372_+	hypothetical protein	A0A1I9KFG8	Aeromonas_phage	4.3e-06	28.3
WP_017900697.1\|139457_140090_+	hypothetical protein	K4JV11	Caulobacter_phage	8.3e-27	41.2
WP_025999285.1\|140371_140716_+	DUF957 domain-containing protein	NA	NA	NA	NA
WP_017900695.1\|140712_140958_+	hypothetical protein	NA	NA	NA	NA
WP_099501131.1\|141031_141421_+	hypothetical protein	NA	NA	NA	NA
WP_014839972.1\|141509_141674_+	hypothetical protein	NA	NA	NA	NA
WP_080932144.1\|142320_143559_+	hypothetical protein	A0A2P9HXK7	Yersinia_phage	1.3e-10	28.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP024643

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP024643_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP024643_1

4454107-4454221

Orphan

Consensus_repeat	Method
CCGATGGCGGCTGTGAACGTGTAGGCCGGGCAATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP024643_1

>merge|NZ_CP024643|1|4454107-4454221|CRISPRCasFinder
CCGATGGCGGCTGTGAACGTGTAGGCCGGGCAATTTTGTAGCCCGGACAGGCGCATTGCGCCGCCTCCGGGAAAGCGTTCCGATGGCGGCTGTGAATGTGTAGGCCGGGCAATTT

>NZ_CP024643|1|1|4454107-4454221|CRISPRCasFinder
CCGATGGCGGCTGTGAACGTGTAGGCCGGGCAATTT	TGTAGCCCGGACAGGCGCATTGCGCCGCCTCCGGGAAAGCGTT
CCGATGGCGGCTGTGAATGTGTAGGCCGGGCAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP024643.1\|WP_004126340.1\|4441633_4441831_-\|cellulose-biosynthesis-protein-BcsF	unknown	unknown	gnl\|CDD\|274605
NZ_CP024643.1\|WP_009651756.1\|4459752_4460682_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP024643.1\|WP_049075769.1\|4449451_4450561_+\|cellulase	unknown	unknown	gnl\|CDD\|236844
NZ_CP024643.1\|WP_004855247.1\|4467988_4468597_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP024643.1\|WP_004855296.1\|4439960_4441637_-\|cellulose-biosynthesis-protein-BcsG	unknown	unknown	gnl\|CDD\|371656
NZ_CP024643.1\|WP_161506133.1\|4444485_4447104_+\|UDP-forming-cellulose-synthase-catalytic-subunit	unknown	unknown	gnl\|CDD\|236918
NZ_CP024643.1\|WP_004855267.1\|4456641_4457928_+\|C4-dicarboxylate-transporter-DctC	unknown	unknown	gnl\|CDD\|234968
NZ_CP024643.1\|WP_161506132.1\|4441827_4443384_-\|cellulose-biosynthesis-protein-BcsE	unknown	unknown	gnl\|CDD\|185005
NZ_CP024643.1\|WP_004855248.1\|4466874_4467633_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187620
NZ_CP024643.1\|WP_042926890.1\|4439769_4439877_+\|type-I-toxin-antitoxin-system-toxin-Ldr-family-protein	unknown	unknown	gnl\|CDD\|372829
NZ_CP024643.1\|WP_004855258.1\|4460877_4462929_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP024643.1\|WP_101836709.1\|4454450_4456487_+\|biofilm-formation-regulator-HmsP	unknown	unknown	gnl\|CDD\|184143
NZ_CP024643.1\|WP_004855263.1\|4458149_4459655_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP024643.1\|WP_009651773.1\|4443751_4444489_+\|cellulose-biosynthesis-protein-BcsQ	unknown	unknown	gnl\|CDD\|182204
NZ_CP024643.1\|WP_049075770.1\|4450542_4454028_+\|cellulose-biosynthesis-protein-BcsC	unknown	unknown	gnl\|CDD\|183140
NZ_CP024643.1\|WP_161506134.1\|4464573_4465605_-\|inner-membrane-protein-YhjD	unknown	unknown	gnl\|CDD\|188082
NZ_CP024643.1\|WP_004126314.1\|4462980_4464303_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP024643.1\|WP_004855289.1\|4443551_4443740_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371309
NZ_CP024643.1\|WP_161506135.1\|4465855_4466755_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176161
NZ_CP024643.1\|WP_004855282.1\|4447114_4449448_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	unknown	unknown	gnl\|CDD\|236851

Protein	Function_ID	Function_description	E-value
NZ_CP024643.1\|WP_004126340.1\|4441633_4441831_-\|cellulose-biosynthesis-protein-BcsF	gnl\|CDD\|274605	TIGR03493, cellullose_BcsF, celllulose biosynthesis operon protein BcsF/YhjT. Members of this protein family are found invariably together with genes of bacterial cellulose biosynthesis, and are presumed to be involved in the process. Members average about 63 amino acids in length and are not uncharacterized. The gene has been designated both YhjT and BcsF (bacterial cellulose synthesis F). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.83962e-24
NZ_CP024643.1\|WP_009651756.1\|4459752_4460682_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	5.15958e-103
NZ_CP024643.1\|WP_049075769.1\|4449451_4450561_+\|cellulase	gnl\|CDD\|236844	PRK11097, PRK11097, cellulase.	0
NZ_CP024643.1\|WP_004855247.1\|4467988_4468597_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.9232e-34
NZ_CP024643.1\|WP_004855296.1\|4439960_4441637_-\|cellulose-biosynthesis-protein-BcsG	gnl\|CDD\|371656	pfam11658, CBP_BcsG, Cellulose biosynthesis protein BcsG. CBP_BcsG is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. (Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation)).	0
NZ_CP024643.1\|WP_161506133.1\|4444485_4447104_+\|UDP-forming-cellulose-synthase-catalytic-subunit	gnl\|CDD\|236918	PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional.	0
NZ_CP024643.1\|WP_004855267.1\|4456641_4457928_+\|C4-dicarboxylate-transporter-DctC	gnl\|CDD\|234968	PRK01663, PRK01663, C4-dicarboxylate transporter DctA; Reviewed.	0
NZ_CP024643.1\|WP_161506132.1\|4441827_4443384_-\|cellulose-biosynthesis-protein-BcsE	gnl\|CDD\|185005	PRK15045, PRK15045, cellulose biosynthesis protein BcsE; Provisional.	0
NZ_CP024643.1\|WP_004855248.1\|4466874_4467633_+\|SDR-family-oxidoreductase	gnl\|CDD\|187620	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs. 1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.31113e-65
NZ_CP024643.1\|WP_042926890.1\|4439769_4439877_+\|type-I-toxin-antitoxin-system-toxin-Ldr-family-protein	gnl\|CDD\|372829	pfam13940, Ldr_toxin, Toxin Ldr, type I toxin-antitoxin system. This family includes the Ldr (long direct repeat) toxins. In Escherichia coli there are four Ldr toxins, LdrA, LdrB, LdrC and LdrD. These toxins inhibit cell growth, decrease cell viability and cause nucleoid condensation. LdrD expression is inhibited by the antisense RNA RdlD, which functions as an antitoxin.	1.55739e-06
NZ_CP024643.1\|WP_004855258.1\|4460877_4462929_+\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	0
NZ_CP024643.1\|WP_101836709.1\|4454450_4456487_+\|biofilm-formation-regulator-HmsP	gnl\|CDD\|184143	PRK13561, PRK13561, putative diguanylate cyclase; Provisional.	0
NZ_CP024643.1\|WP_004855263.1\|4458149_4459655_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.55244e-60
NZ_CP024643.1\|WP_009651773.1\|4443751_4444489_+\|cellulose-biosynthesis-protein-BcsQ	gnl\|CDD\|182204	PRK10037, PRK10037, cellulose biosynthesis protein BcsQ.	1.62518e-153
NZ_CP024643.1\|WP_049075770.1\|4450542_4454028_+\|cellulose-biosynthesis-protein-BcsC	gnl\|CDD\|183140	PRK11447, PRK11447, cellulose synthase subunit BcsC; Provisional.	0
NZ_CP024643.1\|WP_161506134.1\|4464573_4465605_-\|inner-membrane-protein-YhjD	gnl\|CDD\|188082	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD. This family, including YhjD in E. coli, is a conserved inner membrane protein homologous YihY, which in turn was incorrectly assigned to be ribonuclease BN. This, any suggestion this family is similar to ribonucleases should be removed. [Transcription, Degradation of RNA].	1.21997e-133
NZ_CP024643.1\|WP_004126314.1\|4462980_4464303_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.96295e-177
NZ_CP024643.1\|WP_004855289.1\|4443551_4443740_+\|hypothetical-protein	gnl\|CDD\|371309	pfam10945, CBP_BcsR, Cellulose biosynthesis protein BcsR. CBP_BcsR is a family of bacterial cellulose biosynthesis proteins. Cellulose is necessary for biofilm formation in bacteria. Roemling U. and Galperin M.Y. "Bacterial cellulose biosynthesis. Diversity of operons and subunits" (manuscript in preparation).	1.21943e-19
NZ_CP024643.1\|WP_161506135.1\|4465855_4466755_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176161	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 3. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.54463e-105
NZ_CP024643.1\|WP_004855282.1\|4447114_4449448_+\|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB	gnl\|CDD\|236851	PRK11114, PRK11114, cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB.	0

>NZ_CP024643.1|WP_049075770.1|4450542_4454028_+|cellulose-biosynthesis-protein-BcsC
MHKFSLSLFTLSLGVALMPLAHAATTPVQEHLLEQVRLGEASKREDLVRQSLYRLELIDPNNPDVVAARMRYLLRQGDTAGAKQQLERLAKLAPESPELKASRDEMKSSTGDGRQELQQARLLGVAGKVDEAIAAYEKLFNGVPDDDDAAIEYWTLVARLPARHTEGINQLKKLNARLPGNVSLQTALAKQMFGDNKPEEGFAYLEQMSRSAAGRGIAADIWFNEVKSMPVSRASVQALQRFLMQFPTGSTSANARVLLDQQQTQLKDPTFRDRAEGLAAVKAGKGSAAVADLQQAVRADAKDSDAVGALGQAYSQRGDRARAVAQLSKAIKMDPDSPSRDKWDSLLKTNRYWLLIKQGDSALKSGQLAQAQNNYAQAQRIDNTDSYAVLGLGDVAAARKENAAAERYYQRALRMDRGNSLAVRGLANLYRAESPEKASAYIASLSPGQRRSIDDIERSLTNDRLEKQAEALESQGSWAQAAEVQRRRLALDPDSVWIAYRLSRDLVSAGSRSEADAIMRAMVNRQPGDADRVYAYGLYLSGNNQDEMALAQINALPRGQWTDNIRELEARLQSDNVLRQANQLRDSGQEARAIALINQQPTSVRYALTLADWAQQRGDSQTAIAEYQRVLGQQPDNGDARLGLAEVYLADGDKNAARAQVAQLKGEDIDSINMQRRIAQAQAGLGDRAQAQQTFARIVPQAKAQPPSMESALVLRDAARFQAQNGEPQQALEGYKDAMVASGVARERPQDNDTFTRLTRNDSSDDWLKRGIRSDAADLYRQQDLNVTLEHDYWGSSGTGGYSDLKAHTTMLHVDAPLADGRMFFRTDLVNMDAGSFSTKSDGSYSPSWGTCGEIACTGGSKHQSDSGASVAVGWKNDTWSGDIGTTPMGFNVVDVVGGLSYSSDVGPLGYTVNLHRRPISSSLLAFGGQKDNPNDGHTGKTWGGVRADGGGVSLSYDKGEANGVWSSLGVDQLTGKNVADNWRVRWMTGYYYKVINEDNRRVTVGLNNMLWHYDKDLSGYTLGQGGYYSPQEYVSFSVPVTWRQRTANWSWELGGSVSWSHSRTKTEARYPLLNLIPSQYRHDASQLTEEGSSSSGVGYTARALIERRVTSNWFVGAAVDIQQAKDYTPSHALLYVRYSASGWQGDMDIPPQPLVPYADW
>NZ_CP024643.1|WP_049075769.1|4449451_4450561_+|cellulase
MMNAVRSVVLSVLMLAAAQVSAACQWPAWEQFKKEYVSVEGRVIDPSDARKITTSEGQSYGLFFALAANDRDGFRKLFEWTQNNLAEGDLRAHLPGWLWGKKSDDQWTVLDNNSASDSDLWIAWALLEAGRLWDTPQYTEVGKALLARIAEEEVATVPGLGPLVLPGKVGFVDDGGWRFNPGYLPPQLATYFAAYGAPWPKIRDNNLRLLLETAPKGFSPDWVRYQKGKGWQLKADKPIIGSYDAIRVYLWTGMLDDGDKQKAPLLARFKPMAAQTVAQGVPPEKTNIATGKTTGNGPVGFSAALLPFLQKEDARAIQRQRVADNYPGADAYYSAVLTLFGQGWDQHRFRFTAGGELRPDWNQECTSSH
>NZ_CP024643.1|WP_004855282.1|4447114_4449448_+|cellulose-biosynthesis-cyclic-di-GMP-binding-regulatory-protein-BcsB
MNRKLSLICAVAVGIGGWSPFASYAEPAPQATQTTTVPGIAGTVADSQPTATLADPAAPVVVLDNAPTRDVKLTFAKIAPPPGSMVLRGARPEGSVEFGMRSDEVVAKALLNLDYTPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKVSAQIPIDPLYITDFNRVRLEFVGHYRDVCENPASSTLWLDVGRESYLDLTYQSLNVRNDLSHFPVPFYDSRDNRQLTLPMVFASAPDVLQQQAAAIIASWFGSKAGWRGQQFPVQFNQLPDRNAIVFATNDKRPDFLREHPPVKAPTIEMIDHPDNPYVKLLVVFGRDDKDLLQAAKGIAQGNILFRGSSVTVDDVKQLQARKPYDAPNWVRTDRAVTFAELKTYEQQLQSSGLVPDSINVALNLPPDLYLLRANGIDMNLNYRYTMPPIKDSSRMDISLNDQFLQSFSLNSSQDVNKLILRLPVLQGLLDGKTEVTIPALRLGAMNQLRFDFQYMNPMPGGSIDNCITFQPVQNHVVIGDDSTIDFSKYYHFMAMPDLRVFANAGFPYSRMADLADTLVVVPKSPTEGQVATLLETAGGIGAQTGLAAINLRMTDDGSQIKDKDADLLLIGSIPQALKDDTKINLLVEATKSWVKMPMRHYDLASIYPDTEARTPNTRTDVTSTGPMAAIIGFQSPYNDQRSVVALLADSPRGNELLTQALNDSGKRAAMFGSVAVIRESGVNSLRVGDIYYIGHLPWFERIWFALSSHPVLLAILAAVSIVLLAWVLWRMLRIISRRRLDLDDE
>NZ_CP024643.1|WP_161506133.1|4444485_4447104_+|UDP-forming-cellulose-synthase-catalytic-subunit
MIRLSTLLLAPPVGKRLSERYLDYRQHGASWLSAALGCLWASLAWAFMPLETPRWQAIRERHGEFFPHINPHRPRPLDPIRYLLQAMWLLATRAPEPDKKINWRSLAALEGVHGRYAQWLEKLPEKVNARTGHLDKHKELGHLNPKIRRLILGTITFFSLILALLCITQPFNPLSQFIFLLLLWGVALLVRRIPGRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGIILLFAETYAWVVLVLGYFQVVWPLNRQPVPLPEDMAQWPTVDIFVPTYNEDLNVVKNTIYASQGIDWPKDKINIWILDDGGREEFRQFAKDVGVHYIARTTHEHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKELAMMQTPHHFFSPDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRGPLDEIGGIAVETVTEDAHTSLRLHRRGHTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNPLFGKGLKLAQRVCYVNAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLPHMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTFVALINPHKGKFNVTAKGGLVEDEYVDWVISRPYIYLVLLNLVGVGVGIWRFMYGPENEILTVWVSVIWVFYNLIILGGAVAVSVESKQVRRSHRVEMSMPAAIARDDGHLFSCTVHDYSDGGLGVKIHDEAQVLESQHVRLLLKRGQQEYAFPVRVARVNGSEVGLQLLPLSNQQHIDFVQCTFARADTWALWQDSFPEDKPMESLLDILKLGFRGYRHLAEFSPPSVKVIFRSLTMLVAWFVSFIPRRPERAAATLSAEPAMAQQ
>NZ_CP024643.1|WP_009651773.1|4443751_4444489_+|cellulose-biosynthesis-protein-BcsQ
MAILGLQGVRGGTGTTSITAALAWALQLLGETVLVVDASPDNMLRFFFNVDFSHKAGWARATIDGTDWRDAGLRYTSHIDLLPFGQLTPGERENIERLQPTLAPMAGMVQKLHQQGDHRWLLIDLPDGYSPLTRSLIDVCDRTLVIVHPDGNSHIRLHQQALPVNSDILINDLRVGSQLQEDLYQLWLESQRRILPVTIHRDEAMAECLAAKQPLGEYRQDSLAAEEILTLANWCLLHYAGKGAE
>NZ_CP024643.1|WP_004855289.1|4443551_4443740_+|hypothetical-protein
MPAKEPAVPTDATLGYTFQNDFLALSRAFSLPDIHYHDISRREQLTAALKRWPLLAELAEKK
>NZ_CP024643.1|WP_161506132.1|4441827_4443384_-|cellulose-biosynthesis-protein-BcsE
MDIVYSLGISSLWDEVRHMPVGGVWWLNVDRYADAVSLLNHTLAAQDKQSQIAAIVMGDNPNKIIELEKNCGPEKVALFSMPNRYEGLQEMHRDLVCSLEPGNYLFILLCAENAWQNIKSDDLCNWVEKSYRWTNYHRCSLLVLNSGHDIDKQLSPLLREYRSLSGLASIRYQGDNHLFDIAWWGSEKGISARQQLIVLQDENGWRLAQDEETVVQPRSDEKVILSNLRVLEGAPALSEYWTLFDTNDAVFNAGRMAQAATLIFSITQNEQIEQLGRYIHTLRRQRGSALKIVVREQTPSLRATDERLLLSSGANMVIPSGAPLSRCLTLIESVQKQQFTRHIPEDFNTLLTWSQPLKLRGYQKWGDFCEAVHNIMANTMLPADGKGVMVALRPAPGLRVEQALTLCKPNRMGDIMTIGNNRLVLFLSFCRVNDLDTALNHIFPLPTGDIFSNRMIWFEDKQITAEIIQMRGILPENWNTPLPISLGKNETINATHDGRSWRRNPEAHRLSIDGEPTL
>NZ_CP024643.1|WP_004126340.1|4441633_4441831_-|cellulose-biosynthesis-protein-BcsF
MMSIADIIQLVVLCALLFFPLGYLTRHYQRRIRTTLRLMFFKPRYVKPAGVLRREAASRQGKPTK
>NZ_CP024643.1|WP_004855296.1|4439960_4441637_-|cellulose-biosynthesis-protein-BcsG
MTKPKTPTASLPLWRYWRGLSGWNFYFLVKFALLWAGYLNFHPMLNLVFLAFLLVPIPQYKLHRIRHWIAIPLGFMLFWHDTWLPGPESIASQGSQIAGFSADYIWDLVTRFINWNMIGAFFVLLVLWLFISQWLRVTVFVSAIMVWLVVSPLLPSFTFWPAGQPTAAAANTAANTTGGTAIATNTAPANNDIPPQTEPPTSANLTNWLNAFYASEQKRKTTFPDALPADAQPFDVLIINICSLSWSDIEAAGLMDHPLWKHFDLLFKNFNSATSYSGPAAARLLRASCGQLSHANLYQPSGSECYLFENLAKLGFTQQLMLGHNGIFGDFLKELRSLGGIQSPLMDQSGLPVILQGFDGSPVYDDQATLNRWLQTLDKLNTPRTATFYNTLPLHDGNHYPGQSKTADYKARAQKFFDELDSFFTELEKSGRKVLVIVVPEHGAALKGDKMQVSGLRDIPSPSITNVPAAVKFFGIKARHPDAPIIINQPSSYLAISELVVRALDGKMFDENDINWQQYIANLPQSAAVSENSNAIVIQYQGKPYVQLNGGSWVPYPQ
>NZ_CP024643.1|WP_042926890.1|4439769_4439877_+|type-I-toxin-antitoxin-system-toxin-Ldr-family-protein
MTLAQLGLVLWDDLAAPVIAGILVSIIVSWMDNRK
>NZ_CP024643.1|WP_101836709.1|4454450_4456487_+|biofilm-formation-regulator-HmsP
MCVQFQWRTPLRVSRSLTIKQMAMVASVSMAFVLVFCSILLFHFVQQSRFTTATQLESIARSVREPLSAAILKADIPEAEAILSRIQPAGIVSRADVVLPNQFQALRMRFIPERPVPVTITRMFELPVQISLPIYSLERPANPQPLAYLVLQADSYRMYKFVMSALATLVTAYLLLVLILTVAITWCINRLMVRPLRKIARELNDVPQHERLGHQLTLPRLHHDDEIGMLVRSYNRNQQTLLRLHDELSLQSTRFPVSELPNKAFLMAMLEQTVARPQASALLIIACETLQDTAGVLKETQREMLLLTLVEKLRAIIPAQMVLAQVSGYDFAILAHGIDEPWQAVTLSKQVLTVLNERLPLHGIQLRPCASVGIAMFNGEINAEQLYRRAFSAAVTARRKGKNQIEFFDPQQMEKAQRRLMEEHDILTALDNQQFAIWLQPQVDTHSGDVCGAEVLLRQRQADGSWSLPGDLIERIEACGLMVPVGYWVMEEACRQLAAWQNQGIMLPLSVNVSLLQLLHHDRGEEMLALLARYRIAPGTLVLEVTESRRIDDPQAIISLLRPLREAGVRIALDDFGMGYAGLRQLQNIKSLPVDILKIDKVFIDMLPDDISMVPAIIQLARGLNLRIVAEGVETDTQYRWLQEAGVETVQGYLFGCAMPPEAFMARFLPGDVEDVSL
>NZ_CP024643.1|WP_004855267.1|4456641_4457928_+|C4-dicarboxylate-transporter-DctC
MKISFFKSLYVQVLSAIAIGILLGHFYPELGAQMKPLGDAFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPATLDAKAVAVYAEQAKDQGIVAFLLDIIPGSVIGAFASGNILQVLMFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIVCFYITCILFVVVVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSHMDIFHQITLLVVLLLSSKGAAGVTGSGFIVLAATISAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDAKQLDDVLNNRTPASKSHELSS
>NZ_CP024643.1|WP_004855263.1|4458149_4459655_+|insulinase-family-protein
MQGTKIRLLTGGLLMMATVGYVQAEALQPDPAWQQGTLANGFQWQVLATPQRPSDRIEVRLSVNIGSLSESTQQSGFSHFIPRLALTQNGGLPTMQARSLWQQSIDPKRPLPPAIVSYDYSLFNLSIPNNRNDLLKEALSWLASASGKMSIAPETVNHALQGEDMVATWPADTKEGWWRYRLKGSTMLGHDPAAPLKQPVDIAQLKEYYHKWYTPDAMTLIVVGNVDSRSVAEQINKTFGGLKGKRETPVAVPTLSPLPTTPVSIMTDAVRQDKLSLMWDAPWQPIRDSVALQRYWRDDLAREALFWHVQQNLSKSNIKDIGLGFDCRVLYQRAQCAINIESPGERLNANLTTVARELAKVRDRGLPQEEFDALIAQKNLELQKLFATYARTDTYILISQRMRSLQNQVVDIAPEQYQKLRQEFLNSLTVDMLNQYLRQQLSQDMALVLQQPQGEPEYNMKELQATWEKLMAPAPAAAASSSAAGDVVEGRNEATDIPPAQ
>NZ_CP024643.1|WP_009651756.1|4459752_4460682_-|sugar-kinase
MSKKIAVIGECMIELSEKGAAVNRGFGGDTLNTSVYIARQTDASALGVHYVTALGTDTFSQQMLESWQRENVQTDLIQRMADRLPGLYYIETDESGERTFYYWRNEAAAKFWLESEQSASICEELATFDYLYLSGISLAILSPTSREKLLTLLRECRANGGKVIFDNNYRPRLWSSKEETQQVYQQMLSCTDIAFLTLDDEDALWGEKPVAEVIARTHAAGVEEVVVKRGADSCLVAIAGQPQREVPAVKLPKEKVVDTTAAGDSFSAGYLAVRLTGGDAESAAKRGHLTASTVIQYRGAIIPREAMPQ
>NZ_CP024643.1|WP_004855258.1|4460877_4462929_+|AsmA-family-protein
MSRTRKTVAIILGTIVVLIVLLFIVLATFDWNRLKPTINQKVSAELNRPFAIRGDLGVVWERQPGESGWRSWIPWPHVHAEDIVLGNPPDIPQVTMVHLPRVEATLAPLALLSKTVYLPWIKLEQPDARLIRLSEKTNNWTFDLASAGSSEKDAAPSSWSFRLDNILFDRGKIAVDDKVSRADVTVVVDPLGKPLAFSEVTGEKGKGQPQKVGDYVFGLQAKGSYNGQPLSGSGKIGGMLALRSEGTPFPLQGDFRSGNTRVAFTGTVSDPLNLGGVDLRLKFSGDSLGDLYDLTGVLLPDTPAFSTDGHLRATFKEKNGSRFAYQDFNGRIGESDIHGSLTYTTGKPRPKLEGDLESRQLRLADLGPLIGVDSGGKGSQTERRKGEASPQPAGKVLPYDRFETDKWQVMDADVRFKGRRIEHGGTLPISDLSTHVILEQGDLRLQPLRLGLANGTIAGSIHLEGDKKPLQGTANLQARRLKLKALMPNVEMMQKTLGEMNGDVQLRGTGNSVAALLGNSNGNLKLLMNDGLISRNLMEILGLNVGNFIIGQIFGDDEVRVNCAAANIDVVNGVARPQVFAFDTENALINVTGTASFASEQLDLTIDPESKGFRIITLRSPLYVRGTFKSPNAGVKAGPLIARGAVAAALATLVTPAAALLALISPAEGEANQCRAILSQMKK
>NZ_CP024643.1|WP_004126314.1|4462980_4464303_-|MHS-family-MFS-transporter
MQATATTLDNAQDTVPVNSRNKVVVASLIGTAIEFFDFYIYATAAVIVFPHIFFPQGDPAAATLQSLATFAIAFIARPIGSAVFGHFGDRVGRKATLVASLLTMGISTVVIGLLPGYETIGIMAPVLLALARFGQGLGLGGEWGGAALLATENAPPRKRALYGSFPQLGAPIGFFFANGTFLLLSWLLTDQQFMEWGWRMPFIFSAVLVIIGLYVRVSLHESPVFAKVAAAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFSTAAAPIGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVVITTLIILFALFAFKPLLGSGNPLLVFAFLLIGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSILGASVAPYIAAWLQGNYGLPAVGLYLAAMAALTMIALLLTHETRHQSL
>NZ_CP024643.1|WP_161506134.1|4464573_4465605_-|inner-membrane-protein-YhjD
MTPEKDAQRPTEDPGQQPDKNKSAMAAINDSTVAKKANQALKSVTGTAEKVQRNHMVAHIIRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFDKILLNVSDPTLAATLKNTINTAVQQRTAVGIVGLLVALYSGINWMGNLREAIRAQSRDVWERTPQDQEKIWVKYFRDFISLIGLLVALVITLSITSIAGSAQQMIISALYLDYIEWLKPAWRLIGLAISIFANYLLFFWIFWRLPRHRPRRKALIRGTLIAAVGFEVIKIIMTWTLPALVKSPSGAAFGSVLGIMAFFYFFARLTLFCAAWIATAEYKDDRRMPGKAHD
>NZ_CP024643.1|WP_161506135.1|4465855_4466755_-|LysR-family-transcriptional-regulator
MDKIHAMQLFIRVAELESFSRAADTLGLPKGSVSRQIQALESHLGARLLHRTTRRVQLTQDGMVYYERARDLLSNLEELDGMFQLDPSSISGRLRVDMPVAVAKKLVIPQLPAFLQQYPGIELELSSSDRLVDVVREGFDCVVRVGSLKDSGLIARPLGKLTQINCASPQYLTRFGYPQSLDDLADHALIHYASNLGVRPLGFEVVSDGAVRWVKAGGVLTVNSTETYQASCLAGLGIIQVPRVGVREVLRSGELIEILPHYRAEPLPVSLIYPHRRNLSRRVHLFMEWLGGLMKNYVD
>NZ_CP024643.1|WP_004855248.1|4466874_4467633_+|SDR-family-oxidoreductase
MTQRIALVTGGSRGLGKNAALKLAAKGTDIILTWNSNAQAALDVVAEIEQTGVKAAALPLNVGDVSSFDSFAQKVREVLQQRWQRETFDYLLNNAGIGLNIPFAETSEAQFDELMNIQFKGPFFLTQRLLPLLQDGGRILNVSSGLARFALPGYAAYASMKGAMEVLTRYQAKELGARGISVNIIAPGAIETDFGGGVVRDNAQVNQHIAAQTALGRVGLPDDIGDAIAALLSDNLRWMNAQRVEVSGGMFL
>NZ_CP024643.1|WP_004855247.1|4467988_4468597_+|response-regulator-transcription-factor
MQVIMFDRQSIFIHGMKTGLQQYIPEIDIFGTCQAEQLWQTLTAHPEALLILDGDMHSEFCCGLLQEKQRRFPHAQVLLIVSEDNKHWLQRALSYNVRAILQREESLPTFAQTINRLRRGMPCLPDDGLIMAEVSDNKRVHLSQRQREILQLLAAGDSNKEISRTLNISAGTVKAHLELLYRRLDVKNRTQAAIIFNSISET

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP024643_1	1.1\|4454143\|43\|NZ_CP024643\|CRISPRCasFinder	4454143-4454185	43	NZ_CP024643.1	4454315-4454357	0	1.0

1. spacer 1.1|4454143|43|NZ_CP024643|CRISPRCasFinder matches to position: 4454315-4454357, mismatch: 0, identity: 1.0

tgtagcccggacaggcgcattgcgccgcctccgggaaagcgtt	CRISPR spacer
tgtagcccggacaggcgcattgcgccgcctccgggaaagcgtt	Protospacer
*******************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP024643_1	1.1\|4454143\|43\|NZ_CP024643\|CRISPRCasFinder	4454143-4454185	43	NZ_CP023479	Klebsiella quasipneumoniae strain KPC142 plasmid pKQPS142a, complete sequence	150858-150900	8	0.814
NZ_CP024643_1	1.1\|4454143\|43\|NZ_CP024643\|CRISPRCasFinder	4454143-4454185	43	NZ_CP018361	Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence	134886-134928	8	0.814
NZ_CP024643_1	1.1\|4454143\|43\|NZ_CP024643\|CRISPRCasFinder	4454143-4454185	43	NZ_CP026370	Klebsiella quasipneumoniae strain A708 plasmid pA708-2, complete sequence	13335-13377	8	0.814

1. spacer 1.1|4454143|43|NZ_CP024643|CRISPRCasFinder matches to NZ_CP023479 (Klebsiella quasipneumoniae strain KPC142 plasmid pKQPS142a, complete sequence) position: , mismatch: 8, identity: 0.814

tgtagcccggacaggcgcattgcgccgcctccgggaaagcgtt	CRISPR spacer
ggtagcccggacaggcgcagcgcgccgcctccgggaaggaccc	Protospacer
 ****************** .****************.*  ..

2. spacer 1.1|4454143|43|NZ_CP024643|CRISPRCasFinder matches to NZ_CP018361 (Klebsiella oxytoca strain CAV1752 plasmid pCAV1752-278, complete sequence) position: , mismatch: 8, identity: 0.814

tgtagcccggacaggcgcattgcgccgcctccgggaaagcgtt	CRISPR spacer
ggtagcccggacaggcgcagcgcgccgcctccgggaaggaccc	Protospacer
 ****************** .****************.*  ..

3. spacer 1.1|4454143|43|NZ_CP024643|CRISPRCasFinder matches to NZ_CP026370 (Klebsiella quasipneumoniae strain A708 plasmid pA708-2, complete sequence) position: , mismatch: 8, identity: 0.814

tgtagcccggacaggcgcattgcgccgcctccgggaaagcgtt	CRISPR spacer
ggtagcccggacaggcgcagcgcgccgcctccgggaaggaccc	Protospacer
 ****************** .****************.*  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

8179 : 46496

Klebsiella_phage(23.81%)

terminase,integrase,protease,holin,capsid,head,portal,tail

attL 2935:2994|attR 44012:49945

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2935:2994	attL	NA	NA	NA	NA
WP_161505312.1\|8179_8419_+	hypothetical protein	K7P7N3	Enterobacteria_phage	1.7e-17	57.0
WP_032750763.1\|8418_8748_+	hypothetical protein	K7PGV5	Enterobacterial_phage	4.6e-21	48.1
WP_161505313.1\|9063_10233_+\|integrase	tyrosine-type recombinase/integrase	A0A2R2Z2Y0	Escherichia_phage	3.6e-201	85.8
WP_029496794.1\|10216_10402_-	hypothetical protein	G3CFG7	Escherichia_phage	2.8e-15	62.3
WP_161505314.1\|12222_13008_-	hypothetical protein	C7BGF1	Burkholderia_phage	2.6e-62	52.5
WP_161505315.1\|13007_13307_-	hypothetical protein	K7PJS4	Enterobacterial_phage	4.7e-12	43.5
WP_161505316.1\|13396_14314_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	3.3e-48	38.5
WP_131929676.1\|15610_15832_-	hypothetical protein	NA	NA	NA	NA
WP_131929678.1\|16091_16724_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.2e-33	43.0
WP_048023900.1\|16821_17052_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	9.4e-13	53.1
WP_161505317.1\|17086_17317_+	hypothetical protein	NA	NA	NA	NA
WP_161505318.1\|17317_17773_+	hypothetical protein	K7PJS5	Enterobacterial_phage	4.7e-64	84.5
WP_071988277.1\|18010_18223_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.7e-16	72.7
WP_161505319.1\|18179_19094_+	conserved phage C-terminal domain-containing protein	H2DE83	Erwinia_phage	4.0e-30	59.6
WP_161505320.1\|19908_20298_+	RusA family crossover junction endodeoxyribonuclease	A0A192Y8N5	Salmonella_phage	9.0e-48	72.1
WP_032750807.1\|20312_21008_+	phage antirepressor KilAC domain-containing protein	G0ZND1	Cronobacter_phage	1.6e-76	65.2
WP_161505321.1\|21004_21985_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.9e-135	68.1
WP_127673849.1\|21998_22577_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.1e-44	52.8
WP_031280382.1\|23215_23515_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	2.9e-46	99.0
WP_161505322.1\|23511_24054_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	7.5e-77	76.4
WP_014837905.1\|24050_24395_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	4.5e-43	82.5
WP_103449079.1\|24391_24667_+	hypothetical protein	NA	NA	NA	NA
WP_139512776.1\|24617_24803_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	5.6e-24	86.9
WP_064824428.1\|24799_25042_+	hypothetical protein	NA	NA	NA	NA
WP_139512777.1\|25107_25353_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	4.7e-18	60.5
WP_139512778.1\|25413_25764_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	2.1e-51	80.7
WP_154935485.1\|25921_26419_+\|terminase	phage terminase small subunit P27 family	K7PHI2	Enterobacteria_phage	6.3e-62	72.1
WP_154935486.1\|26418_28176_+\|terminase	terminase large subunit	A0A1B5FP96	Escherichia_phage	0.0e+00	90.6
WP_032408651.1\|28186_28372_+	hypothetical protein	Q8HAD5	Salmonella_phage	6.2e-15	61.7
WP_154935487.1\|28371_29601_+\|portal	phage portal protein	U5P411	Shigella_phage	1.6e-204	82.4
WP_049088852.1\|29587_30241_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	6.0e-105	86.9
WP_154935488.1\|30255_31464_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	4.9e-193	83.8
WP_044701267.1\|31502_31706_+	hypothetical protein	M1FN89	Enterobacteria_phage	6.2e-08	50.0
WP_032750783.1\|31702_32023_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	1.7e-15	39.8
WP_044701262.1\|32031_32376_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	2.6e-35	67.5
WP_154935489.1\|32372_32822_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	4.6e-64	83.9
WP_071561198.1\|32818_33166_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	1.8e-31	61.1
WP_161505323.1\|33222_33927_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	2.7e-82	67.4
WP_161505324.1\|33957_34362_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	1.4e-30	53.8
WP_161505325.1\|34364_34670_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	6.2e-28	65.0
WP_071561202.1\|34724_35009_+	hypothetical protein	NA	NA	NA	NA
WP_161505326.1\|35069_38660_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	8.1e-244	62.6
WP_161505327.1\|38681_39155_+	hypothetical protein	A0A286S298	Klebsiella_phage	9.2e-55	62.1
WP_032750768.1\|39141_39627_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.8e-53	66.9
WP_161505328.1\|39636_40017_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	4.2e-58	81.0
WP_161505329.1\|40013_43097_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	68.7
WP_161505330.1\|43175_46496_+	BNR-4 repeat-containing protein	A0A286S1P0	Klebsiella_phage	1.5e-42	42.6
44012:49945	attR	NA	NA	NA	NA

DBSCAN-SWA_2

372102 : 380673

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103468763.1\|372102_373509_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.3e-39	28.9
WP_014230060.1\|373721_374786_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-104	55.0
WP_049070182.1\|374799_375669_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	8.3e-110	67.7
WP_064378512.1\|375700_376591_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	2.4e-27	32.1
WP_014230057.1\|376606_377161_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.3e-51	56.7
WP_032693859.1\|377334_378501_+	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	7.0e-112	54.0
WP_139512586.1\|379074_379197_-	small membrane protein	NA	NA	NA	NA
WP_032693858.1\|379668_380673_-	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	3.6e-32	30.1

DBSCAN-SWA_3

912466 : 979092

Escherichia_phage(30.0%)

plate,integrase,transposase

attL 913693:913710|attR 982729:982746

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004851620.1\|912466_913018_+\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	4.5e-53	55.1
WP_049076272.1\|913055_913583_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_009652081.1\|913628_914630_-	fimbrial protein	NA	NA	NA	NA
913693:913710	attL	NA	NA	NA	NA
WP_161505393.1\|914645_917222_-	fimbria/pilus outer membrane usher protein	NA	NA	NA	NA
WP_086531055.1\|917282_917972_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_161505394.1\|918072_918591_-	fimbrial protein	NA	NA	NA	NA
WP_161505395.1\|919046_919595_-\|integrase	tyrosine-type recombinase/integrase	A0A2L1IV36	Escherichia_phage	1.2e-50	51.9
WP_161505396.1\|919942_920908_-	ATP-binding cassette domain-containing protein	A0A1V0SJ29	Klosneuvirus	1.4e-09	26.9
WP_004851601.1\|920904_921885_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.3e-09	26.1
WP_025105865.1\|921881_922832_-	ABC transporter permease	NA	NA	NA	NA
WP_009652083.1\|922828_923788_-	ABC transporter permease	NA	NA	NA	NA
WP_161505397.1\|923831_925535_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004851591.1\|925801_926440_-	CatA-like O-acetyltransferase	NA	NA	NA	NA
WP_004851590.1\|926470_926854_-	VOC family protein	NA	NA	NA	NA
WP_004851588.1\|926947_927718_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	3.6e-16	28.7
WP_009653680.1\|927731_928361_-	LysE family transporter	NA	NA	NA	NA
WP_004119381.1\|928586_929222_+	carbonic anhydrase	NA	NA	NA	NA
WP_004851585.1\|929328_930135_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004851583.1\|930157_931042_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	9.7e-82	56.1
WP_049076291.1\|931414_931807_+	YdeI family stress tolerance OB fold protein	NA	NA	NA	NA
WP_004851580.1\|931828_931978_+	hypothetical protein	NA	NA	NA	NA
WP_049076299.1\|935500_936898_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_004851572.1\|936884_938570_-	alpha-glucosidase	NA	NA	NA	NA
WP_004851570.1\|938616_939615_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.1e-20	29.3
WP_161505398.1\|939969_940473_+	hypothetical protein	NA	NA	NA	NA
WP_025105847.1\|940482_940929_+	DUF421 domain-containing protein	NA	NA	NA	NA
WP_161505399.1\|940941_941460_+	2-oxo-tetronate isomerase	NA	NA	NA	NA
WP_154062121.1\|941482_942466_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_109213515.1\|942462_944088_-	glycosidase	NA	NA	NA	NA
WP_161505400.1\|944096_945107_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004851556.1\|945106_946510_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004851554.1\|946571_947453_-	manganese catalase family protein	NA	NA	NA	NA
WP_009653688.1\|947472_947979_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004851550.1\|948011_948509_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004136767.1\|948597_948783_-	general stress protein	NA	NA	NA	NA
WP_004851543.1\|950547_951045_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_161505401.1\|951081_952632_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_161505402.1\|952650_953988_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_161505403.1\|953984_954638_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_174237699.1\|954641_956363_+	OmpA family protein	NA	NA	NA	NA
WP_009653685.1\|956368_956860_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_161505404.1\|957029_959669_+	type VI secretion system ATPase TssH	A0A1S6UBG5	Serratia_phage	6.4e-97	33.4
WP_139530475.1\|959661_960216_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_086531044.1\|960209_960677_+	hypothetical protein	NA	NA	NA	NA
WP_161505405.1\|961047_963585_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	4.7e-12	21.8
WP_161505406.1\|963587_964478_+	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_161505297.1\|964479_965448_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	5.1e-185	98.4
WP_004851520.1\|966233_966881_+	DUF2931 family protein	NA	NA	NA	NA
WP_161505407.1\|968418_968985_+	SEL1-like repeat protein	NA	NA	NA	NA
WP_004851517.1\|969038_969305_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_161505408.1\|969308_970463_+	hypothetical protein	NA	NA	NA	NA
WP_161505409.1\|970449_973866_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_161505410.1\|973865_975461_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_161506302.1\|975547_976255_+	hypothetical protein	NA	NA	NA	NA
WP_161505411.1\|976270_978034_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_161505412.1\|977988_979092_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
982729:982746	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1056284 : 1094662

Klebsiella_phage(26.19%)

terminase,holin,capsid,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004851361.1\|1056284_1056800_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.1e-24	53.8
WP_128350001.1\|1057830_1058094_-	pyocin activator PrtN family protein	A0A1L5C290	Pseudoalteromonas_phage	5.4e-12	45.1
WP_161505424.1\|1058101_1058248_-	hypothetical protein	A0A1B5FPC2	Escherichia_phage	1.1e-14	70.8
WP_161505425.1\|1058783_1059008_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	2.3e-24	77.0
WP_085397480.1\|1059004_1059130_-	sodium:solute symporter	NA	NA	NA	NA
WP_161505426.1\|1059126_1059693_-	hypothetical protein	A0A088C4R7	Shewanella_sp._phage	8.0e-29	40.6
WP_161506303.1\|1059689_1060541_-	DNA-binding protein	A0A2L1IV39	Escherichia_phage	1.5e-34	61.6
WP_128910073.1\|1060540_1060762_-	hypothetical protein	NA	NA	NA	NA
WP_161505427.1\|1060761_1061175_-	hypothetical protein	A0A286S1S2	Klebsiella_phage	3.6e-71	95.6
WP_064757943.1\|1061171_1061390_-	hypothetical protein	A0A286S1P6	Klebsiella_phage	6.4e-27	88.4
WP_174237700.1\|1061361_1061574_-	hypothetical protein	A0A1B5FPB7	Escherichia_phage	9.6e-20	73.4
WP_161506304.1\|1061566_1061854_-	hypothetical protein	NA	NA	NA	NA
WP_161505428.1\|1061894_1062104_-	hypothetical protein	NA	NA	NA	NA
WP_155037150.1\|1062283_1062511_-	hypothetical protein	NA	NA	NA	NA
WP_155037149.1\|1062479_1062695_-	hypothetical protein	NA	NA	NA	NA
WP_161505429.1\|1062691_1062880_-	hypothetical protein	NA	NA	NA	NA
WP_161506305.1\|1062876_1063065_-	hypothetical protein	NA	NA	NA	NA
WP_161505430.1\|1063559_1063979_-	helix-turn-helix domain-containing protein	R9TNM0	Vibrio_phage	5.9e-05	40.3
WP_161505431.1\|1064060_1064264_+	helix-turn-helix domain-containing protein	A5VW97	Enterobacteria_phage	1.1e-09	50.9
WP_155037146.1\|1064581_1065043_-	hypothetical protein	NA	NA	NA	NA
WP_161505433.1\|1065476_1066370_+	DNA-binding protein	I6NW17	Burkholderia_virus	1.4e-59	49.8
WP_161505435.1\|1066381_1067275_+	ATP-binding protein	Q8W641	Enterobacteria_phage	7.3e-85	63.4
WP_161505437.1\|1067255_1068635_+	AAA family ATPase	Q8W640	Enterobacteria_phage	5.3e-159	64.3
WP_155037142.1\|1068621_1068990_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.3e-36	59.5
WP_161505439.1\|1068986_1069769_+	antitermination protein	A0A286N2Q2	Klebsiella_phage	4.1e-132	89.2
WP_161505440.1\|1069923_1070130_+	hypothetical protein	NA	NA	NA	NA
WP_150343270.1\|1070120_1070669_-	hypothetical protein	NA	NA	NA	NA
WP_161505442.1\|1071090_1071438_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	6.4e-37	68.2
WP_161505443.1\|1071440_1071983_+	hypothetical protein	A0A286N2Q6	Klebsiella_phage	1.5e-77	77.5
WP_142461843.1\|1071979_1072324_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.6e-35	73.7
WP_142461842.1\|1072320_1072590_+	hypothetical protein	G8C7W1	Escherichia_phage	2.1e-11	46.0
WP_161505445.1\|1072804_1073218_+	hypothetical protein	A0A1B0VMI8	Pseudomonas_phage	4.8e-31	49.6
WP_174237690.1\|1073214_1073430_+	hypothetical protein	A0A286SGR9	Klebsiella_phage	8.5e-16	59.7
WP_161505447.1\|1073444_1073729_+	hypothetical protein	NA	NA	NA	NA
WP_161505449.1\|1074394_1075852_+	glycosyltransferase family 2 protein	K7PKP3	Enterobacterial_phage	5.3e-250	84.1
WP_161506306.1\|1075848_1076433_+	hypothetical protein	S4TR53	Salmonella_phage	1.2e-83	72.9
WP_161505450.1\|1076425_1076794_+	HNH endonuclease	S4TTG9	Salmonella_phage	2.0e-49	76.7
WP_161505452.1\|1076973_1077474_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	4.0e-56	75.0
WP_161505453.1\|1077477_1079136_+\|terminase	terminase large subunit	Q3HQS7	Burkholderia_phage	1.6e-234	71.1
WP_161505455.1\|1079194_1081129_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	1.1e-308	85.8
WP_174237701.1\|1081167_1081335_+	hypothetical protein	S4TR49	Salmonella_phage	1.0e-16	78.2
WP_161505459.1\|1083567_1083894_+\|head,tail	phage head-tail connector protein	S4TSQ3	Salmonella_phage	7.8e-29	63.9
WP_142477562.1\|1083906_1084245_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	5.2e-36	63.4
WP_161505461.1\|1084241_1084691_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	1.2e-59	79.2
WP_161505463.1\|1084687_1085035_+	DUF3168 domain-containing protein	K7PM93	Enterobacterial_phage	1.9e-28	55.8
WP_161505464.1\|1085094_1085547_+	hypothetical protein	K7PHL2	Enterobacterial_phage	1.8e-55	70.5
WP_154948510.1\|1085577_1085982_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	5.5e-32	55.7
WP_161505466.1\|1085984_1086290_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	2.8e-28	64.6
WP_015370209.1\|1086365_1086749_+	hypothetical protein	A0A0M4QWT0	Salmonella_phage	2.3e-32	53.9
WP_161505468.1\|1086818_1090226_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	1.0e-179	41.2
WP_161505470.1\|1090246_1090720_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.2e-54	62.5
WP_032750768.1\|1090706_1091192_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.8e-53	66.9
WP_032750767.1\|1091201_1091582_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.6e-57	80.2
WP_161505472.1\|1091578_1094662_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	68.7

DBSCAN-SWA_5

1823618 : 1876723

Enterobacteria_phage(38.24%)

terminase,tRNA,integrase,transposase,capsid,tail,head,portal,plate

attL 1828906:1828922|attR 1863749:1863765

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009653484.1\|1823618_1824119_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_004138309.1\|1824282_1824729_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_161506323.1\|1824712_1825507_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_109213373.1\|1825604_1826789_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004850004.1\|1826826_1827519_-	CTP synthase	NA	NA	NA	NA
WP_009653452.1\|1827681_1828191_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004850001.1\|1828177_1828522_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_004849999.1\|1828516_1828756_-	DUF333 domain-containing protein	NA	NA	NA	NA
1828906:1828922	attL	NA	NA	NA	NA
WP_161505655.1\|1829027_1829924_-	type VI secretion protein	NA	NA	NA	NA
WP_161505656.1\|1829928_1830261_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_047722936.1\|1830456_1831650_+\|transposase	IS4 family transposase	S5FM71	Shigella_phage	4.3e-141	63.5
WP_075212584.1\|1831694_1831943_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_161505657.1\|1831988_1833143_-	phage late control D family protein	B9A7A9	Serratia_phage	4.1e-173	78.1
WP_161505658.1\|1833295_1834477_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7NV69	Enterobacteria_phage	7.2e-157	70.1
WP_063106287.1\|1834476_1834992_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	3.4e-63	68.2
WP_161505659.1\|1835047_1835347_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	6.9e-32	76.0
WP_032415160.1\|1835379_1835520_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	5.9e-10	71.8
WP_161505660.1\|1835500_1838221_+\|tail	phage tail tape measure protein	F1BUT7	Erwinia_phage	4.4e-125	45.5
WP_161505661.1\|1838235_1838724_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	6.8e-53	61.1
WP_161505662.1\|1838821_1839898_-\|tail	phage tail protein	Q37842	Escherichia_phage	2.7e-33	51.0
WP_161505663.1\|1839961_1843036_-	BNR-4 repeat-containing protein	A0A2H4N7A3	Pectobacterium_phage	7.2e-15	44.3
WP_161505664.1\|1843037_1843640_-\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	7.9e-43	47.0
WP_161505665.1\|1843632_1844532_-\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	5.2e-91	61.5
WP_064411818.1\|1844518_1844887_-	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	1.6e-30	60.0
WP_161505666.1\|1844883_1845468_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	1.8e-63	62.4
WP_161505667.1\|1845467_1846109_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	2.2e-43	47.9
WP_123830304.1\|1846105_1846567_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	3.3e-33	47.7
WP_123830303.1\|1846563_1846863_-	peptidase	NA	NA	NA	NA
WP_148379604.1\|1847103_1847655_-	glycoside hydrolase family protein	Q1I0Z1	Pasteurella_virus	6.6e-28	40.8
WP_040205281.1\|1847651_1847933_-	hypothetical protein	B9A7B8	Serratia_phage	3.7e-19	57.1
WP_040205278.1\|1847923_1848124_-\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	9.7e-14	63.1
WP_032750312.1\|1848123_1848621_-\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	3.8e-59	68.5
WP_161505668.1\|1848723_1849620_-\|terminase	terminase	B9A7B6	Serratia_phage	3.1e-91	73.9
WP_161505669.1\|1849667_1850717_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.3e-105	54.5
WP_161505670.1\|1850741_1851575_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	5.5e-95	64.8
WP_161505671.1\|1851734_1853456_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	1.6e-226	66.2
WP_161505672.1\|1853455_1854508_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	6.5e-141	68.9
WP_161505673.1\|1854947_1855307_+	biotin transporter BioY	NA	NA	NA	NA
WP_161505674.1\|1855311_1857927_-	replication endonuclease	A0A0M4RTM8	Salmonella_phage	3.3e-194	52.0
WP_161505675.1\|1857923_1858472_-	AsnC family protein	NA	NA	NA	NA
WP_174237704.1\|1858617_1858791_-	hypothetical protein	NA	NA	NA	NA
WP_161505676.1\|1858777_1859056_-	hypothetical protein	NA	NA	NA	NA
WP_161505677.1\|1859055_1859991_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	1.9e-83	54.4
WP_161505678.1\|1859987_1860215_-	hypothetical protein	NA	NA	NA	NA
WP_161505679.1\|1860223_1860781_-	3'-5' exoribonuclease	D4HTX2	Vibrio_phage	3.0e-12	30.5
WP_161506324.1\|1861070_1861340_-	hypothetical protein	NA	NA	NA	NA
WP_161505680.1\|1861342_1861582_-	hypothetical protein	NA	NA	NA	NA
WP_161505681.1\|1861836_1862112_-	hypothetical protein	Q1JS60	Enterobacteria_phage	3.0e-42	85.6
WP_161505682.1\|1862234_1862534_+	helix-turn-helix domain-containing protein	Q1JS61	Enterobacteria_phage	3.0e-43	87.9
WP_161505683.1\|1862649_1863663_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	1.9e-153	78.6
WP_161505684.1\|1863894_1864908_+	diguanylate cyclase	NA	NA	NA	NA
1863749:1863765	attR	NA	NA	NA	NA
WP_004101234.1\|1864965_1865067_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_101836648.1\|1865066_1865141_+	protein YoaJ	NA	NA	NA	NA
WP_009653461.1\|1865280_1865403_+	hypothetical protein	NA	NA	NA	NA
WP_004131510.1\|1865451_1865715_-	DUF2534 family protein	NA	NA	NA	NA
WP_009653545.1\|1865843_1866482_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004849987.1\|1866572_1867487_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	4.5e-74	51.2
WP_009653379.1\|1868424_1869468_-	type II asparaginase	NA	NA	NA	NA
WP_004849982.1\|1869747_1870938_+	HD domain-containing protein	NA	NA	NA	NA
WP_032721374.1\|1871013_1872798_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	7.3e-20	37.2
WP_004131480.1\|1872942_1874193_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	4.4e-19	90.7
WP_004849978.1\|1874429_1875092_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_009653508.1\|1875101_1875578_+	NUDIX hydrolase	NA	NA	NA	NA
WP_161505685.1\|1875616_1876723_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_6

2705036 : 2759796

Morganella_phage(20.0%)

tRNA,integrase,transposase,protease,holin,tail

attL 2722474:2722493|attR 2746221:2746240

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_161505837.1\|2705036_2706554_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.5e-85	36.1
WP_009652662.1\|2706895_2708371_-	dipeptide permease DtpD	A0A0P0IY73	Acinetobacter_phage	1.7e-46	28.5
WP_009652676.1\|2708430_2710578_-	lysine decarboxylase CadA	NA	NA	NA	NA
WP_004848490.1\|2710659_2711997_-	cadaverine/lysine antiporter	NA	NA	NA	NA
WP_049074720.1\|2712361_2713894_-	lysine decarboxylation/transport transcriptional activator CadC	NA	NA	NA	NA
WP_009652622.1\|2714246_2715113_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_004848484.1\|2715150_2716026_-	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	6.8e-19	26.9
WP_004848483.1\|2716163_2716706_+	hypothetical protein	NA	NA	NA	NA
WP_161505838.1\|2716715_2717543_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_161505839.1\|2717728_2719705_+	fibronectin type III domain-containing protein	NA	NA	NA	NA
WP_161505840.1\|2719795_2721001_-	MFS transporter	NA	NA	NA	NA
2722474:2722493	attL	NA	NA	NA	NA
WP_064370887.1\|2722807_2723101_-	hypothetical protein	NA	NA	NA	NA
WP_064370896.1\|2723284_2723527_+	excisionase family protein	S4TND0	Salmonella_phage	4.5e-13	45.5
WP_064370888.1\|2723917_2724343_+	hypothetical protein	A0A1W6JPI4	Morganella_phage	2.7e-45	65.7
WP_064370889.1\|2724887_2725103_-	hypothetical protein	A0A1P8DTG1	Proteus_phage	1.1e-12	54.7
WP_064370891.1\|2726023_2726395_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.6e-30	52.9
WP_064370893.1\|2726976_2729967_-\|tail	tail protein (tape measure)	F1C5E9	Cronobacter_phage	9.6e-73	33.4
WP_064370894.1\|2729974_2730301_-	hypothetical protein	NA	NA	NA	NA
WP_042934036.1\|2730300_2730471_-	hypothetical protein	NA	NA	NA	NA
WP_064370895.1\|2730637_2731777_-	hypothetical protein	NA	NA	NA	NA
WP_064408147.1\|2732215_2732761_+	hypothetical protein	NA	NA	NA	NA
WP_064408145.1\|2733214_2734120_-\|protease	serine protease	NA	NA	NA	NA
WP_137056427.1\|2734131_2734335_-	hypothetical protein	NA	NA	NA	NA
WP_064371073.1\|2735124_2737881_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	3.1e-291	55.4
WP_064371072.1\|2737873_2738224_-	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.4e-39	70.9
WP_174237712.1\|2738233_2738833_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	6.0e-27	38.9
WP_064371070.1\|2738856_2739078_-	hypothetical protein	NA	NA	NA	NA
WP_064358016.1\|2739074_2739272_-	hypothetical protein	A0A1W6JPD9	Morganella_phage	9.2e-09	46.2
WP_137056425.1\|2739268_2739532_-\|holin	nicotinic acetylcholine receptor subunit beta	NA	NA	NA	NA
WP_064371068.1\|2739528_2739846_-	hypothetical protein	NA	NA	NA	NA
WP_064371067.1\|2739842_2740022_-	hypothetical protein	NA	NA	NA	NA
WP_004202343.1\|2740944_2741124_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_064370512.1\|2741116_2741926_-	antA/AntB antirepressor family protein	A0A0R6PJV6	Moraxella_phage	1.1e-26	51.2
WP_161505841.1\|2741939_2742371_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	1.4e-25	47.5
WP_029602956.1\|2742370_2742583_-	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	3.2e-07	47.2
WP_012569499.1\|2742750_2743731_-\|transposase	IS5-like element ISKpn26 family transposase	A0A077SK28	Escherichia_phage	6.8e-185	98.8
WP_064370509.1\|2744972_2746187_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	4.0e-126	53.6
WP_004130086.1\|2746770_2747637_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.9e-30	34.8
2746221:2746240	attR	NA	NA	NA	NA
WP_004099787.1\|2747638_2747851_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004848430.1\|2747989_2749375_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.0e-45	35.1
WP_004099775.1\|2749548_2750043_+	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_009652637.1\|2750046_2750769_+	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_086530533.1\|2750875_2751196_+	hypothetical protein	NA	NA	NA	NA
WP_004848424.1\|2751301_2751811_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_161505842.1\|2751807_2752875_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_161506342.1\|2753080_2754160_+\|tRNA	tRNA 2-selenouridine(34) synthase MnmH	NA	NA	NA	NA
WP_004130005.1\|2754277_2755423_-	porin	NA	NA	NA	NA
WP_161505843.1\|2755632_2755938_+	monooxygenase	NA	NA	NA	NA
WP_161505844.1\|2756101_2758519_-	ABC transporter permease	NA	NA	NA	NA
WP_004099723.1\|2758515_2759202_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.6e-34	36.5
WP_014228230.1\|2759172_2759796_+\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA

DBSCAN-SWA_7

5683653 : 5697171

Escherichia_phage(36.36%)

integrase

attL 5675850:5675863|attR 5687309:5687322

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5675850:5675863	attL	NA	NA	NA	NA
WP_161505313.1\|5683653_5684823_+\|integrase	tyrosine-type recombinase/integrase	A0A2R2Z2Y0	Escherichia_phage	3.6e-201	85.8
WP_029496794.1\|5684806_5684992_-	hypothetical protein	G3CFG7	Escherichia_phage	2.8e-15	62.3
WP_161505314.1\|5686812_5687598_-	hypothetical protein	C7BGF1	Burkholderia_phage	2.6e-62	52.5
5687309:5687322	attR	NA	NA	NA	NA
WP_161505315.1\|5687597_5687897_-	hypothetical protein	K7PJS4	Enterobacterial_phage	4.7e-12	43.5
WP_161505316.1\|5687986_5688904_-	recombination-associated protein RdgC	A0A1W6JP69	Morganella_phage	3.3e-48	38.5
WP_131929676.1\|5690199_5690421_-	hypothetical protein	NA	NA	NA	NA
WP_161506286.1\|5690680_5691307_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	1.2e-33	43.0
WP_048023900.1\|5691412_5691643_+	helix-turn-helix transcriptional regulator	Q716D6	Shigella_phage	9.4e-13	53.1
WP_161506287.1\|5691677_5691830_+	hypothetical protein	NA	NA	NA	NA
WP_161505318.1\|5691909_5692365_+	hypothetical protein	K7PJS5	Enterobacterial_phage	4.7e-64	84.5
WP_071988277.1\|5692602_5692815_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.7e-16	72.7
WP_161506288.1\|5693683_5694505_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	9.3e-111	69.9
WP_127673849.1\|5696592_5697171_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.1e-44	52.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP024642

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP024641

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP024643

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection