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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP034432 Bradyrhizobium sp. LCT2 chromosome, complete genome 1 crisprs csa3,DEDDh,RT,WYL 0 0 12 0
NZ_CP034431 Bradyrhizobium sp. LCT2 plasmid pLCT2, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_CP034432
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP034432_1 2913495-2913613 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 508 : 40536 25 Caulobacter_phage(40.0%) transposase NA
DBSCAN-SWA_2 1883982 : 1943659 48 uncultured_Mediterranean_phage(27.27%) protease,transposase NA
DBSCAN-SWA_3 2019766 : 2223584 148 Stx2-converting_phage(12.5%) integrase,transposase attL 2059702:2059716|attR 2109805:2109819
DBSCAN-SWA_4 2233116 : 2347009 55 Leptospira_phage(25.0%) integrase,tRNA,transposase attL 2248130:2248152|attR 2285034:2285056
DBSCAN-SWA_5 2352018 : 2445366 56 Acidithiobacillus_phage(22.22%) transposase NA
DBSCAN-SWA_6 2456347 : 2523808 58 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_7 4976063 : 4983481 8 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_8 7021750 : 7031340 8 Escherichia_phage(42.86%) NA NA
DBSCAN-SWA_9 8084505 : 8140679 37 Enterobacter_phage(10.0%) integrase,transposase attL 8077756:8077771|attR 8092953:8092968
DBSCAN-SWA_10 8175424 : 8337844 107 Acidithiobacillus_phage(13.64%) integrase,protease,transposase attL 8247886:8247905|attR 8255036:8255055
DBSCAN-SWA_11 8370326 : 8443193 44 Acidithiobacillus_phage(37.5%) transposase NA
DBSCAN-SWA_12 9386106 : 9413742 23 Acidithiobacillus_phage(40.0%) integrase,transposase attL 9385507:9385525|attR 9404349:9404367
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP034431
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1107 : 126098 56 Enterobacteria_phage(24.0%) transposase,integrase attL 81621:81637|attR 134523:134539
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage