CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP047984	Pontibacter sp. BT326 chromosome, complete genome	3 crisprs	csa3,cas3,WYL,DEDDh,cas4	0	1	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP047984_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047984_1

890792-890984

Orphan

Consensus_repeat	Method
CACAGCCACCATTGAACAGAGAGGGAATGGCAACTATGCCAGCCAAGAG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP047984_1

>merge|NZ_CP047984|1|890792-890984|PILER-CR
CACAGCCACCATTGAACAGAGAGGGAATGGGAACAGTGCCAGTCAAGATCAGAGTAATTGGTCAGTTAACAATATGGCAATTATTAAACAGAGGGGGAATGGCAACTACGCCGATCAGGCTCAGGTTGATGATTCACAAAACAACACAGCCACCATTGAACAGAGAGGGAATGGTAACTCTGCCAGCCAAGAG

>NZ_CP047984|1|1|890792-890984|PILER-CR
CACAGCCACCATTGAACAGAGAGGGAATGGGAACAGTGCCAGTCAAGATCAG	AGTAATTGGTCAGTTAACAATATGGCAATT
ATTAAACAGAGGGGGAATGGCAACTACGCCGATCAGGCTCAGGTTGATGATT	CACAAAACAACACAGCCACCATTGAACAGAG
AGGGAATGGTAACTCTGCCAGCCAAGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047984.1\|WP_161888253.1\|898384_900925_-\|magnesium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319772
NZ_CP047984.1\|WP_161888252.1\|895803_897846_-\|glycogen-debranching-protein	unknown	unknown	gnl\|CDD\|200465
NZ_CP047984.1\|WP_161888250.1\|892963_893512_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161888251.1\|893664_895164_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235351
NZ_CP047984.1\|WP_161888239.1\|874855_875260_-\|nucleoside-diphosphate-kinase-regulator	unknown	unknown	gnl\|CDD\|180236
NZ_CP047984.1\|WP_161888249.1\|891418_892864_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182242
NZ_CP047984.1\|WP_161888241.1\|877601_880004_-\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	unknown	unknown	gnl\|CDD\|181856
NZ_CP047984.1\|WP_161888247.1\|887525_888920_+\|curli-production-assembly/transport-component-CsgG	unknown	unknown	gnl\|CDD\|367655
NZ_CP047984.1\|WP_161888246.1\|886672_887029_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|337812
NZ_CP047984.1\|WP_161888245.1\|884866_885748_+\|DUF3078-domain-containing-protein	unknown	unknown	gnl\|CDD\|378621
NZ_CP047984.1\|WP_161888257.1\|907486_908371_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|238182
NZ_CP047984.1\|WP_161888244.1\|882301_883222_+\|DUF808-domain-containing-protein	unknown	unknown	gnl\|CDD\|377542
NZ_CP047984.1\|WP_161888256.1\|906815_907034_-\|DUF2892-domain-containing-protein	unknown	unknown	gnl\|CDD\|378561
NZ_CP047984.1\|WP_161888248.1\|889131_890454_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182242
NZ_CP047984.1\|WP_161888242.1\|880214_881129_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP047984.1\|WP_161888255.1\|904861_906517_-\|alpha-glucan-family-phosphorylase	unknown	unknown	gnl\|CDD\|273968
NZ_CP047984.1\|WP_161891305.1\|903546_903942_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|225536
NZ_CP047984.1\|WP_161888243.1\|881411_881852_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP047984.1\|WP_161888240.1\|876033_877374_+\|NADP-specific-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|181834
NZ_CP047984.1\|WP_161888254.1\|903983_904730_-\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|225536

Protein	Function_ID	Function_description	E-value
NZ_CP047984.1\|WP_161888253.1\|898384_900925_-\|magnesium-translocating-P-type-ATPase	gnl\|CDD\|319772	cd02077, P-type_ATPase_Mg, magnesium transporting ATPase (MgtA), similar to Escherichia coli MgtA and Salmonella typhimurium MgtA. MgtA is a membrane protein which actively transports Mg(2+) into the cytosol with its electro-chemical gradient rather than against the gradient as other cation transporters do. It may act both as a transporter and as a sensor for Mg(2+). In Salmonella typhimurium and Escherichia coli, the two-component system PhoQ/PhoP regulates the transcription of the mgtA gene by sensing Mg(2+) concentrations in the periplasm. MgtA is activated by cardiolipin and it highly sensitive to free magnesium in vitro. It consists of a transmembrane domain and three cytosolic domains: nucleotide-binding domain, phosphorylation domain and actuator domain, and belongs to the P-type ATPase type III subfamily. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP047984.1\|WP_161888252.1\|895803_897846_-\|glycogen-debranching-protein	gnl\|CDD\|200465	cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes. Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP047984.1\|WP_161888251.1\|893664_895164_+\|hypothetical-protein	gnl\|CDD\|235351	PRK05137, tolB, Tol-Pal system protein TolB.	1.89036e-13
NZ_CP047984.1\|WP_161888239.1\|874855_875260_-\|nucleoside-diphosphate-kinase-regulator	gnl\|CDD\|180236	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional.	1.03884e-42
NZ_CP047984.1\|WP_161888249.1\|891418_892864_+\|hypothetical-protein	gnl\|CDD\|182242	PRK10101, csgB, curlin minor subunit CsgB; Provisional.	2.7871e-05
NZ_CP047984.1\|WP_161888241.1\|877601_880004_-\|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I	gnl\|CDD\|181856	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional.	0
NZ_CP047984.1\|WP_161888247.1\|887525_888920_+\|curli-production-assembly/transport-component-CsgG	gnl\|CDD\|367655	pfam03783, CsgG, Curli production assembly/transport component CsgG. CsgG is an outer membrane-located lipoprotein that is highly resistant to protease digestion. During curli assembly, an adhesive surface fibre, CsgG is required to maintain the stability of CsgA and CsgB.	7.97637e-75
NZ_CP047984.1\|WP_161888246.1\|886672_887029_+\|hypothetical-protein	gnl\|CDD\|337812	pfam10627, CsgE, Curli assembly protein CsgE. Curli are a class highly aggregated surface fibers that are part of a complex extracellular matrix. They promote biofilm formation in addition to other activities. CsgE is a non-structural protein involved in curli biogenesis. CsgE forms an outer membrane complex with the curli assembly proteins CsgG and CsgF.	2.43093e-17
NZ_CP047984.1\|WP_161888245.1\|884866_885748_+\|DUF3078-domain-containing-protein	gnl\|CDD\|378621	pfam11276, DUF3078, Protein of unknown function (DUF3078). This bacterial family of proteins has no known function.	3.01597e-26
NZ_CP047984.1\|WP_161888257.1\|907486_908371_-\|universal-stress-protein	gnl\|CDD\|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	2.05149e-20
NZ_CP047984.1\|WP_161888244.1\|882301_883222_+\|DUF808-domain-containing-protein	gnl\|CDD\|377542	pfam05661, DUF808, Protein of unknown function (DUF808). This family consists of several bacterial proteins of unknown function.	1.39821e-132
NZ_CP047984.1\|WP_161888256.1\|906815_907034_-\|DUF2892-domain-containing-protein	gnl\|CDD\|378561	pfam11127, DUF2892, Protein of unknown function (DUF2892). This family is conserved in bacteria. The function is not known.	6.59699e-14
NZ_CP047984.1\|WP_161888248.1\|889131_890454_+\|hypothetical-protein	gnl\|CDD\|182242	PRK10101, csgB, curlin minor subunit CsgB; Provisional.	0.00132714
NZ_CP047984.1\|WP_161888242.1\|880214_881129_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	6.38045e-83
NZ_CP047984.1\|WP_161888255.1\|904861_906517_-\|alpha-glucan-family-phosphorylase	gnl\|CDD\|273968	TIGR02094, Glycogen_phosphorylase, alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/pfam00343.	1.52396e-138
NZ_CP047984.1\|WP_161891305.1\|903546_903942_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	1.91943e-35
NZ_CP047984.1\|WP_161888243.1\|881411_881852_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	2.86277e-31
NZ_CP047984.1\|WP_161888240.1\|876033_877374_+\|NADP-specific-glutamate-dehydrogenase	gnl\|CDD\|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
NZ_CP047984.1\|WP_161888254.1\|903983_904730_-\|L,D-transpeptidase-family-protein	gnl\|CDD\|225536	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown].	3.25955e-55

>NZ_CP047984.1|WP_161888248.1|889131_890454_+|hypothetical-protein
MKTTVYIMVVVLMSAADAVAQGNLNQVEQSGTDGTVSLTQQGRENSDFIQQAGISNTAEIVQKGGSNQATQTQGEFTEGNAASIMQAGKNNSAGQVQAAYDDYYASEGNKATIQQSGRSNRAVQYQTDASYANQAVIKQSGNSNAAAQDQSYLFSSSNRVTVEQAGNVNRTLQFQGDNSVADNIAAIEQRGHGNSATQVQEWHVQNNAVTIKQRGDGNVAEQDLFDNSYSNKPTIEQSGNGNMAGQYQSLSSQDNRATVSQRGNGNEASQSQVFDSWDNGAAVKQDGNGNIAQQAQVIVSSSDRAEIEQQGDNNTGYQGQGDWAAEAPSVGNSATIGQKGNGNVASQSQISQDINSYSADNIAIANQSGDGNIANQNQISSEGNIARIVQKGNGNYATQLQEGGSNNTITTIQTGNGHQSNLSQVGGSGNTTTVIQNGGH
>NZ_CP047984.1|WP_161888247.1|887525_888920_+|curli-production-assembly/transport-component-CsgG
MYKFIYGYLIVVAILLLLYVPGCAPYFHQPMQTSGARLGVPTTGNLNLVSLPPPQHKVVAAVYKFRDQTGQYKPSVTGANWSTAVTQGATTILIKSLEDSGWFTPIERENLGNLLNERKIIRSTRAEAEANTGQKEPPLPPLLFAGVVLEGGIISYDANVVTGGAGLRYFGAGGSGQYREDKITVYLRAISTSTGEILKTVYTSKTIPSQSVDFGVFRYVKFKRLLEAETGFTYNEPSEIAVKEAIDKAVQSLIIEGIFAGYWALRDKQDIQSPIVREYMQEREDIKRTDIYGRLLANRRGVIGISLAAGGLRYNGDLARQQVKPMAEAGLRISGRGSFAFDTRLGAGELGTARNFERKVIFGELNLNYSLFPRTRYTPYLQGGGGVLSVEDSFSGSIALKRLFPYVKGGMGIEYLATDRLGIEASVSSNYLFDDNLDDIDGGRFNDYYWVGKIGVTYYFGLFK
>NZ_CP047984.1|WP_161888246.1|886672_887029_+|hypothetical-protein
MEQHPASSAALEIDGLIVDETITKIGRDFYETFHRQWEPPPMAKDYIILIKERPMMGNGAFVKVIVNEEEVIEYQLQPRHDLIEEASGYTVSVVYEFLVNDQLNRQLEAEGRKEKEVY
>NZ_CP047984.1|WP_161888245.1|884866_885748_+|DUF3078-domain-containing-protein
MKKTLIFLAILLSNSAMVIAQSEADTTWRRTFDAGLNLNQAAFSDNWKAGGISSMGLNTYLNARADYVNGKISWDNEAQLQYGFIKNKGEDQRKSIDRLYLDTKYGYAISSDWNAFFSVNFLSQFTKGYEYDIDADGNDRLISNFLSPGFLTFAIGAEYKPNPYFSLRLSPFAPRFTFLTDDAVAENERYGVPEGKTVRSEWLAAMIQASYARDIMTNVNLKLNYMAYINYQELSAKQIDHLFNAALTAKVNDYINVSLMANAIYDNDQDSDIQYNQSLGLGILYTMKGFTLR
>NZ_CP047984.1|WP_161888244.1|882301_883222_+|DUF808-domain-containing-protein
MATGLLALLDDVSALVKVSAASLDDVPTQVAKTTGKVSGIVIDDTAVTPKYVVGLNPSRELSIIYRIAKKSLINKLIFLSPAALLLGFFAPWAITPILMMGGAYLCYEGYEKVHSMFSKHHDEDAGHGPSGDAEVITPAELEKTRVSSAVRTDLILSAEIVAITYATVAEKVLLTQIAVMLAVAVFITIAVYGFVGLIVKADDIGLHMAKETQHPQVRKFGRGIVTFMPHFLKILGYVGTAAMLWVGAEIIAHGIPFTSHALDDLQHSLAHLPALAWFVKATACGLAGLALGAVIDKLVKLIRKAF
>NZ_CP047984.1|WP_161888243.1|881411_881852_-|nucleoside-deaminase
MNEELYMRKCIELALIAKKRGDSPGGALIVRKGKIIAEGIEGGKTFRDITYHSEIEAIRQATEFLQAADLSDCELYTTHEPCIMCSYVIRHHKISHVFFGLATGEIGGISSKLPVLSETSVRRWGSPPKLTAGVLESECRILHEEG
>NZ_CP047984.1|WP_161888242.1|880214_881129_-|pirin-family-protein
MLDIVIEARKASLGPGMDVRRILPFRLRRMVGPFIFMDHAGPVELRPDLGPSMDVLPHPHIGLSTVSYLFGGQVTHRDSLGVQQVIRPGEVNWMTAGSGIAHSERFEDPAALAGGALEMIQTWVALPEKDEEATPSFDNYKPEQLPIFTDTGVWMRLIAGDAFGLKNNVRTHSPLFYLHVQLDTGARFGLPMEHSERGIYIAKGSIEVSGRSYSAGQMLVFGKGADPVILAKQAATLMLLGGEPLGERFIWWNFVSSRKERIEQAKADWKEGRILLPPSDNLEYVPLPEDRSKPAGGPAPQALS
>NZ_CP047984.1|WP_161888241.1|877601_880004_-|bifunctional-aspartate-kinase/homoserine-dehydrogenase-I
MKVLKFGGKSLSNGGPLERAIDIIKEEAGTEAIAVVVSARGQSTDLLLDLYHRAVGGKDFREGLEHFMALQHVQGLESDMDAHLREVGEVLQALQLIGLQSDRARDRILAYGEVISARTVAALLRREGLEAVFVDARALIYTHAGTGETSVDFPRSKRSTQAFFNRLGPRQIPVITGFIASDPEGRTVTLGRNGSNYTATLIASFIRASEVQNWTDVEGVYTASPKYVKSAQRIPHLSYREANELANFGANVLHAKTILPLVESGIPLKIYSSFAPGRQGTLIDGEGAGKGIKAVSTVEDVSLVSIEGRGLLGKVGIDARIFNALGRRNISVRLISQASSERGIGFVVNKEDAAAAEQALSAEFSAELQDGAISHIRVNSDMAIIAIVGRHNYALEKAIQGLRRNKVWMHLISNSINGEHISLVIENKSLKKAVNVVHNQVFGAIKTINLFAFGKGNVGGRLLDQIMETGEEVVRRRNLKINIVGVADTMRMIFREDGLNSNWREELAESSEQRNLGDIIDHLRESGLENIVVADNTSSQELAEQYPVLVSSGFDIVASNKKANSISYEFYQNLRNLLKRRGKLFYYETNVGAGLPLIDTIKHLHNSSDRIERIRGVFSGSLSYMFNNFSIQDKPFSAILSEARELGLTEPDPREDLSGMDVARKLIILAREVGLQSELDDVSVENLVPESVSDAKDYAELYARKDALDDYFGQIKSRLGEDEVLRYVGDLEVGKNKLTVSLVKASKNSPLGNIRNADSIFELYTESYGAQPIIIQGAGAGAEVTARGVYSDLLRMGEQY
>NZ_CP047984.1|WP_161888240.1|876033_877374_+|NADP-specific-glutamate-dehydrogenase
MNRQVKEFLEKVELRNSNEPEFLQSVQEVAETIIPFLEQAPRYKKAKILERMVEPERVIMFRVPWLDDAGEVQVNRGFRVQMNSAIGPYKGGLRFHPSVNLSILKFLAFEQVLKNSLTGLPMGGGKGGSDFDPKGKSDNEIMKFCQSFMTELYRHVGADIDVPAGDIGVGGREVGYLFGQYKRIKGEFTGVLTGKGPGWGGSVIRPEATGYGVVYFAEDMLETRGETMKGKTVLISGSGNVAQYTVERCLQAGAKVVTMSDSEGFIYDPEGIDEAKLAYVMDLKNEQRGRIREYTKKFGGEFFEGERPWKIKCDVAFPNATQNELNEEDARLLVKNGCFCVAEGANMPCTPEAIHVFTEAKILYAPGKASNAGGVAVSGLEMSQNSLRISWTREEVNSRLWQIMKDIHRICVKYGKEEDGYINYEKGANIGGFVKVAEAMIAQGIV
>NZ_CP047984.1|WP_161888239.1|874855_875260_-|nucleoside-diphosphate-kinase-regulator
MNTIYLTQRDYQRLHSLVLAQREISGPQAVEGLSRELKRARVVPSEEIPVDVVTMNSLVKLKDLKTSAVMEITIVYPKDADLANRKVSILAPVATAVLGCRVGDEVEWPAPQGTVKYKVEEIIYQPEAAGDQYL
>NZ_CP047984.1|WP_161888249.1|891418_892864_+|hypothetical-protein
MKAIVFITAVALLTAGTAMAQGNVSQVEQTGTDGTATVTQQGRKNMAIIQQAGISNTAEIVQKGRENEAKQIQDGTAENNITYIRQAGMNNTAEQIQGSSPEGGPLSAGNVAKTEQSGNENQANQQQLDAAEDNTATIRQRGNGNEAGQQQWYGAGGNVANVEQSGHGNASLQDQLYGADGNTATVEQIGNRNAATQSQFDSDNNSALIVQRGEGNIASQTQNGDPEGGEASQDNTAIIIQRGIGNIAAQYQGNDSHDNTSTIEQRGNDNSAEKWQVEDSHDNIATLEQRGNGNSAKLFQYEGSFLNKATIEQIGADNNIQQAQNGTSSGNIATIEQGGNGNTIFQSQVLNSEDNIATIVQKGNRNTAKQFQFTSSDNTATIEQKGDRNSIIQFHDYGSEGSIATIIQRGNGNEAEQLQYDSLDNIATIEQRGNGNYATQFQDGGTNNTITTTQTGNGHQSNLIQIGGNGNAITVTQTGGY
>NZ_CP047984.1|WP_161888250.1|892963_893512_+|hypothetical-protein
MKTTIPLKLYITLIILLGISQSPAVAQYTTAEDLLLKQINYGGSYSGNSISKQEHAKLLKKQQLTGNSSNVVQSGLYNAAFLQQIGSGNVVNLMQEGNQNNYEGSIKGNNILSDIGQRGHGNSIVQDIAADNKQYVIYQQGNQNEVIQLEKGNGAQSYKVEQIGNGMSIIIQNGGVTPPGKK
>NZ_CP047984.1|WP_161888251.1|893664_895164_+|hypothetical-protein
MLRTAAALKLVRLFVFVLLLTSCNEDTIEPRGEGSMAGTVISAETGNPIAAVSLTTSPASSAIITDTDGSFVFSAMPAGDYNIAAKKAGYKTETVLVAVKDGQETSVTIVLEKAKGSTAPKQPDDPSPATDTLNQPVNITLRWSRSDSENTDTLTYDVYLYESGATERKTLAEGIRDTSVVASGLKYNTTYFWQVKVQDPEGNATIGEIWSFTTLTIPETRFLFARAVDGNFDIFSSDGTEENSYRLTSTFYQELWPVLNPKRDVIAYASNASVQPHIYVMNRDGSGKRQVTTLPIAGYHNPGIGFAWSPDGGQLLYAYYEHLYRIERDGSGLALVAKAPANRHFRMVDWTDRGNKIVAQTIGSDINDSEIYIMNADGTNRKLLVENLAGRTESPSFSIDGKEVLFSHDVSGFENAEGRQLDAHIFVKKIDGTGLVDISANKPAGTNDLYPRFSPDGSKLIFVNSANDGLGSQDIWMVDVADGRNRTKLFSNATMPEWE
>NZ_CP047984.1|WP_161888252.1|895803_897846_-|glycogen-debranching-protein
MGSWFTIEGSPFPLGVTYLPGEDAYNFTLYSKSASLVKLLLFVEEVYEKPVISFDLDPLVHKSQRVWHCRLKRCQMAGAQYYAFQVQHSSDVLSDLCHIDSEKLLLDPYAKEIFFPPEFSRSAASRPGSNMGKAPLGYILPNHGEFDWQGDRMVAHEHDLVVYEMHVRGFTRNPNSSVDKEIRGTFAGVVDKIPYLKELGITAVELMPVHQFDPQAGDYWGYMPLNFFSPHKSFAADQCPAGAILEFKTMVRELHKASIEVILDVAFSHTTEEGLSGPTYHLKGIDASTYYLVQEDPQVPFLNYSGTGNTLRTDHPAVQRMIMDSLRYWVKEMHVDGFRFDLASIFTRRSDGSVGEAPIFSDIATDPDLAHVRLIAEPWDAQGLYQLGRDFPGRTWLQWNGGFRDDVRRFVKGDEAMVGALMQRLYGSDNLFPDDLLNACHPYQSVNYITSHDGFTLYDLVSYNDKHNMANGHNNGDGNTVNYSWNSGWEGDAQVPAEVLARRKQQAKNFFMLLLLANGTPMFVAGDEFLQTQGGNNNPYNQDNPTTWLDWSRLELMAAHFEFVRKAIAFRKRHPSLGRSRFWRDDVTWYGSKGFVDWGPASHSLAFCLKGESQGDRDIYVMINSYWESIDFHFMEPGPWFRIVDTSLESPQDFLPEDHIEEIQHPHYDVCSRSVAVFLR
>NZ_CP047984.1|WP_161888253.1|898384_900925_-|magnesium-translocating-P-type-ATPase
MRQVFLASDTIEQLFRQLQTSASGLNATTAKRRISAQRKSTRTHTKLHDQVKLLLRQFSNPLMLLLIIIVILSAFLGETSDTLIILFILLLSGLLGFLQELQAGNAVEKLLKMIEVQHLVVRDGKEVSMHTQEVVPGDVILLNAGDMIPADCRIIDSKELHVNESTLTGETFPVAKAPGILPEETPLSKKSNCLWQGTNVVSGTAKVLAVHTGQDTVFGQMAHSLTQHLPTAFEAGLKGFGYFLLRVTVLLATFILATNLYFDKPFFNSLLFSLALAIGMAPELLPAVMTFAMSAGARRMMKRKVIVKRLSSIFNLGEVNVLCTDKTGTITEGSVKVYAIVDTAGKSDPKATLYAFLNATFQSGFTNPIDEVIRSLPVTATGFEKIDEIPYDFIRKRLSIAVRSKKGNLLITKGAIQNVLDVCSGVLAEDGTEKELNGPERKRLLRKAEAYSQQGLRVLGIAYRQSTKDSFGHEDEQQMVFQGFILLEDRLKDSTAAALDRLEKMGIGVKIITGDNRYAAMHAASALGMDTSNLISGQALNQMSPEALTVNAARTAVFAEIEPYQKERIVRALQMSRLRVAYLGDGINDVAAIHAADTGISTNNAVDVAKEAADFVLLEKDLGVLADGVQEGRKSFANSMKYIFATTGATFGNMFSVAGASLLLPFLPMLPKQILLTNLITDLPYLAVSSDHVDEEQLLRPLQWNIGLTRRFMLVFGLHSSLFDFVTFYTLYFYFGLRDAPFRTGWFLESIATELLIVFIIRTRKPLLKSRPHPLLLWLAALALAITIWLPFSPLAPLLGLAFAHQVEVLTIGAILLLYVVTGELLKRWFFNANLDKRNGKHLSTV
>NZ_CP047984.1|WP_161891305.1|903546_903942_-|L,D-transpeptidase-family-protein
MRVVQVPGPWNALGKVKFLFSTSYAQYLHDTPAKALFMQPYRALSHGCVRVQHPDTLAAFLLSENWMRKKDVQALWATSTPDKRVYLPKPVQVKLGYFTCWVDDRGVLQFRRDIYKRDMLLAHTAIALYRK
>NZ_CP047984.1|WP_161888254.1|903983_904730_-|L,D-transpeptidase-family-protein
MKIYYWYILFLLALMNSSSTNIRKPVQQAPHPQCLRLEQALQQYRALAANHEWIYFPGKIRLHPGDSNEYVSSLRRVLSLAGDLKASDSLSHPLFDEALTKAVKGFQQRHGLVADGVVGQETLQELNISPSQRLRQIEVNLMRWKAFNKETALPLVFVNIPDYTLQLLDKTGQTIWTTRVVVGKPAKAFQTKPIDSSIKHLVLNPSWNVPQSIFRKEIIPLLQKDRGCLTRNHMVLYRQQGNKKTSIP
>NZ_CP047984.1|WP_161888255.1|904861_906517_-|alpha-glucan-family-phosphorylase
MGDFDKYLHPYTYMPAYKQRVAYFCMEYAIDQSLKIYAGGLGFLAGSHMRSAYNLKQNMIGIGILWKYGYYDQVRQPDQTMGVLFQKKIYSFLEETEIRFTITVNHAPVQVGVHYLPPRVFGTVPLFLLSTDLPENNYLAQTISHKLYDVDKSAKIAASILLGAGGMKLLEILNFAPDVYHLNEAHALPLAFSLFEKYGNVEEVRNRVVFTTHTPEEAGNEKTDIRLLSDMNFFSQLSLEQVRQITQMEGDTFNHSLAALRLSRMSNGVSRMHGETVVKNWSGYQGICPITYITNAQSYFYWADKEMYDHLFSEEDEMLLARKRELKRELFKEVADQTGDMLQQDVFTIVWARRFAAYKRADLLLENLDRFLSFLTDMTQPVQVIWARKPYPIDYEAISVFNKLVHLSEQYTNFSVLVGYELKLSKLLKQGADLWLNTPLITHEASGTSGMSAAMNGAVVFSTADGWFPEFVQHGENGFVVPPVNPTLSLHEQNNHDATHILDMLQNEILPMYYTKKGKWLSVTKNSMRDILPYFDSTRMAQEYYEKLYSR
>NZ_CP047984.1|WP_161888256.1|906815_907034_-|DUF2892-domain-containing-protein
MKKNMSNADRMIRLIIAVVIAVLYFTGTLTGTVAIVLLVLAGIFVLTSMVGYCPVYALFGWNTRSRTTRHSR
>NZ_CP047984.1|WP_161888257.1|907486_908371_-|universal-stress-protein
MKTLLVPTDFSENATNALRYAAALAKRMKASLLLVHVLPIPVMVTAESTAYTSFDPRLQKCYIGKLKALAHQLQLENAFSLEIECYCEYGLFQDVLNRLVRSKQADLVVMGARGAGSLVEKALGTTASSFMKEAICPVVAVPSEALYSDLHRIAYASDFTGDEAAFLKQLFLFSEPLGAEVYIVHVKTKDAAPVAMEEDQLLMEVSAKFPDKKFSVAQVRARTVIGGIEIFLNDNQIVMLAVAVHERGFLQGLFHRSVSKRLALRTIVPLLSLPEKPYNLQRYLADRAEETMEW

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Crispr_ID: NZ_CP047984_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047984_2

1967431-1967584

Orphan

Consensus_repeat	Method
TTTGGTGTACTTGAAGTTGGCC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP047984_2

>merge|NZ_CP047984|2|1967431-1967584|PILER-CR
TTTGGTGTACTTGAAGTCGTCGCCACCCCGGAAGTCGGCTCCCCTGATGTTGAAGGTGTCTGCTATTTTGGCGTACTTGAAGTTGGCCGTGCCGTCGAATACCGCTCTCTGGAAGTTTACGCCCTCCTGAAACTTGGTGTACTTGAAGTTTGCC

>NZ_CP047984|2|2|1967431-1967584|PILER-CR
TTTGGTGTACTTGAAGTCGTCG	CCACCCCGGAAGTCGGCTCCCCTGATGTTGAAGGTGTCTGCTATTTTGG
CGTACTTGAAGTTGGCCGTGCC	GTCGAATACCGCTCTCTGGAAGTTTACGCCCTCCTGAAACTTGG
TGTACTTGAAGTTTGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047984.1\|WP_161888997.1\|1968881_1969619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161889004.1\|1976046_1976502_-\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	unknown	unknown	gnl\|CDD\|235509
NZ_CP047984.1\|WP_161889002.1\|1973427_1974876_-\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_CP047984.1\|WP_161888996.1\|1968508_1968880_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP047984.1\|WP_161888989.1\|1962448_1962820_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|274132
NZ_CP047984.1\|WP_161888985.1\|1958432_1959218_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP047984.1\|WP_161888993.1\|1966762_1967335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161888999.1\|1969810_1970662_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP047984.1\|WP_161888998.1\|1969623_1969821_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161888992.1\|1965569_1966295_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP047984.1\|WP_161889001.1\|1971776_1973300_-\|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|235579
NZ_CP047984.1\|WP_161888991.1\|1964272_1965517_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP047984.1\|WP_161889000.1\|1971044_1971773_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|238694
NZ_CP047984.1\|WP_161888988.1\|1961326_1962424_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP047984.1\|WP_161888995.1\|1968268_1968457_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161888987.1\|1960637_1961084_-\|CHRD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214804
NZ_CP047984.1\|WP_161888986.1\|1959356_1959917_+\|DUF4864-domain-containing-protein	unknown	unknown	gnl\|CDD\|374400
NZ_CP047984.1\|WP_161889003.1\|1974927_1976043_-\|transaldolase	unknown	unknown	gnl\|CDD\|236551
NZ_CP047984.1\|WP_161888990.1\|1962855_1964106_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP047984.1\|WP_161891361.1\|1960016_1960496_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP047984.1\|WP_161889004.1\|1976046_1976502_-\|RpiB/LacA/LacB-family-sugar-phosphate-isomerase	gnl\|CDD\|235509	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional.	3.63007e-63
NZ_CP047984.1\|WP_161889002.1\|1973427_1974876_-\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP047984.1\|WP_161888996.1\|1968508_1968880_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	1.63249e-28
NZ_CP047984.1\|WP_161888989.1\|1962448_1962820_-\|four-helix-bundle-protein	gnl\|CDD\|274132	TIGR02436, S23_ribosomal_protein, four helix bundle protein. This family describes a protein of unknown function whose structure is a bundle of four long alpha helices. Some of the first members of this family were found encoded in the (atypically large) intervening sequence (IVS) of Leptospira 23S RNA, a region often present in the rRNA gene and removed during rRNA processing without re-ligation. However, this location is not conserved, and naming this protein as a 23S RNA protein is both confusing and inaccurate.	2.05969e-31
NZ_CP047984.1\|WP_161888985.1\|1958432_1959218_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	3.10746e-41
NZ_CP047984.1\|WP_161888990.1\|1962855_1964106_-\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.18837e-31
NZ_CP047984.1\|WP_161888999.1\|1969810_1970662_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.26163e-59
NZ_CP047984.1\|WP_161888992.1\|1965569_1966295_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.25362e-105
NZ_CP047984.1\|WP_161889001.1\|1971776_1973300_-\|glucose-6-phosphate-dehydrogenase	gnl\|CDD\|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP047984.1\|WP_161888991.1\|1964272_1965517_-\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	1.68337e-35
NZ_CP047984.1\|WP_161889000.1\|1971044_1971773_-\|6-phosphogluconolactonase	gnl\|CDD\|238694	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.	6.71937e-89
NZ_CP047984.1\|WP_161888988.1\|1961326_1962424_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	3.49815e-37
NZ_CP047984.1\|WP_161888987.1\|1960637_1961084_-\|CHRD-domain-containing-protein	gnl\|CDD\|214804	smart00754, CHRD, A domain in the BMP inhibitor chordin and in microbial proteins.	2.06506e-17
NZ_CP047984.1\|WP_161888986.1\|1959356_1959917_+\|DUF4864-domain-containing-protein	gnl\|CDD\|374400	pfam16156, DUF4864, Domain of unknown function (DUF4864). This family consists of uncharacterized proteins around 120 residues in length and is mainly found in various Anabaena and Nostoc species. Distant homology analysis suggests this family is related to NTF2-like proteins and specifically to proteins that bind small molecules. HMM partly overlaps with Tol_Tol_Ttg2 (PF05494) involved in Toluene tolerance and lumazine binding family (PF12870) and these families should form a clan.	4.18909e-08
NZ_CP047984.1\|WP_161889003.1\|1974927_1976043_-\|transaldolase	gnl\|CDD\|236551	PRK09533, PRK09533, bifunctional transaldolase/phosoglucose isomerase; Validated.	0
NZ_CP047984.1\|WP_161891361.1\|1960016_1960496_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.77967e-12

>NZ_CP047984.1|WP_161888993.1|1966762_1967335_+|hypothetical-protein
MFSAQLPAPVLFHPLKHHLGYIKDFIAQSPSTSEAELKAALQTIGSSQLDLYRGPLPQGQIAQEVLQYLAERHLQHPVLYQEFLLATGTSYRLLTLSDKSDWVLRWGVVEARHVHLHPARHSRHTLRVKANVLKTAIAAAIAAKRRGENPYMYAQYINEVRAAWVALPPVKDAGSSESLRHMLALLAADI
>NZ_CP047984.1|WP_161888992.1|1965569_1966295_-|ABC-transporter-ATP-binding-protein
MIQLTNIQKYYAVGQNKLHVLKGIDMHVREGEFVSIMGSSGSGKSTLLNILGILDDYDMGEYTLAGTRIKNLSATKAAYYRNKFLGFVFQSFNLLSFKNAMENVALPLYYQQVGRKQRNKLALEYLDMVGLKDWAEHSPNELSGGQKQRVAIARALISQPKLILADEPTGALDTQTSYEVMDIFKDVNRKGMTVVIVTHENDIADQTHRIIRLKDGLIVNDDRGLHTEAVESNSAAVATGH
>NZ_CP047984.1|WP_161888991.1|1964272_1965517_-|ABC-transporter-permease
MFDLDKWQEIGATMQKNKLRTFLTAFGVFWGIFMLVLLLGAGKGLENGVYNRFGDGAKNSIYVWSGKTAVAHKGMKPGREIKLTNEDLRAIEREVADLNILAPRNRVWGEYTINYKDQNGSYQVFGTEPDFLDLNGERPYRGRLLNHYDEKEKRKVVVLGEQVATVLFKEQDPIGEYVNIRGIHFKVVGTFKARGNNSGRREERAYIPFSTLQGAFNQPNLVQMMALTAQEGVAAKDMEDRLRTLLAQRHKFSESDDMALGVENTEAEYLKVMGLFSGIRIFVWVVGIGTLIAGIVGVSNIMLIIVKERTREIGVRKALGATPVSIVSLILQESVVITALSGYMGLLAGTGVLALLEYLLVSSGAELAFFGTPEVDLSVALSATVILVLSGAIAGLMPALKAANIKPIEALRAE
>NZ_CP047984.1|WP_161888990.1|1962855_1964106_-|ABC-transporter-permease
MIDIDKWTEIYNTVKKHRLRTALTAFGVFWGIFMLVVLLGAGKGLENGITSEFNIAKNAVFVWTQRTSVPYMGLNAGRFIQMTNDDVAAIKANIPEVGVVAPSNQLQGDFTVNYKDKSSAFTVNGETPELLSVKPLKVTTGRFVNGIDIQEKRKVAVVGPRVLEVLFPGEKKPIGKYISIKGSYFQVVGTFEPLGKGEDVMEDAKVIYIPHTTLQQTYNEVNKVGFMALIPKPGVPAAVIEDKVKALLMQRHQVAPEDLKAFGSANVEEEFQEVQGLFAGIAGFSWLVSIGTILAGIIGVGNIMLIVVKERTKEIGVRKALGATPWSIISLIIQESIVITGFAGYMGLLTGTGIIALIEYFMRKFDVQAGFFGIPEVNLGIAVTATVLLVFTGALAGLIPATKAARVNPVVALRDE
>NZ_CP047984.1|WP_161888989.1|1962448_1962820_-|four-helix-bundle-protein
MINGKENVLYAKAYASATRVVKAHQYLGQEKREFVLAKQLLRSGTSIGANVAEANGAISDAEFSAKLSIAYKGCLETKYWLDLLKDTNFNDEKQDRSLYADADELGRMLFASIRKVRGIRTDK
>NZ_CP047984.1|WP_161888988.1|1961326_1962424_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKVLLGVFVLVFLGLSGWLGYYFYKKANTDPVVYKTEAPFETDIVKKTVATGSIVPRKEVQVKSQVSGIVEELHVEAGQVVKKGQLLAKIRIVPNMVSVNNAETSLQTAKLNFEEAKRELARYDQLYARKVIPEQEYRKYKADFALKQEAMQAAENNLQLVREGSSRKSGQQSSNLVYSTIDGMLLDVPVKVGTSIIERNNFNEGTTIATVADMRSLVFEGEIDESEVGKLKENMDLVLTIGAIEGRVFDAKLEYIAPKGVDEEGSIKFPIRAQVQLDEKDFIRAGYSANADIVLDKREKVIAIKESMLQFDKEAPFVEVEVAPQKFEKRMIKTGLSDGINIEVLSGLSREEKVKVPDVGIAHI
>NZ_CP047984.1|WP_161888987.1|1960637_1961084_-|CHRD-domain-containing-protein
MLLLGTFMTACDEDDINLDDLLNNDVNFEGVQLKGANEVPMVQSDGFGLINVYYNSKTRIITYDLAWTLGNSDDQTLGMHFHGPATPQQNAGVIIHVKGFTSSSTGSLTGSTRALTKEEEKQLLNGLWYFNIHSSTHPGGELRGNLIH
>NZ_CP047984.1|WP_161891361.1|1960016_1960496_-|GNAT-family-N-acetyltransferase
MPSSIQIVDYNPFYAKAFYDLNHEWISKYFVMEEADEQSLGDPQNYIINKGGHILIALFHGEPVGACALLKEEEGIYEMSKMAVTPRAQGLRIGRLLGERIVERARKLGARKLFLLSNRRLTTALSLYTRLGFVEVPMQPSIYQRADIKMELDLEKEAE
>NZ_CP047984.1|WP_161888986.1|1959356_1959917_+|DUF4864-domain-containing-protein
MKGKDKVFDYIMFVLGLLLLILFWVQFPAMPTLEDRQYATYAMPDAIASSSSKWTYIKPDKALSPQQVVNIQLQALQQNDRSDSGIITVFNFSSPRNRLHIGPINHLRVLVRDPAYQPMLNFKSYKKGQLVESDGTAYQLVVIEGRDGQKEVYMFILAKQRRGAYKGCWMTEGIARMDQELLTSLT
>NZ_CP047984.1|WP_161888985.1|1958432_1959218_-|phosphatase-PAP2-family-protein
MKNPLSSHVKQALGKVKRQPLVLRLRQRYPGLWQFIADRFNTKVFVGLPLTLMALAFAANIALLSELTESVLDMEWIVALDKEFTALLYKMRSDTLSRILYGFTQLGEQEAVFIIGGLVSAIFLYRRHYVALFAFWLALGGVGISTRYGKTFISRERPSDVAYYVVEHFSFPSGHATTVMAMFGLVAYFLYRHYYAHPRRALVLWLAAALILIVGFSRVYLGVHYLSDVLAGFLLGALWLLVGISLMEVMSYRRERKAASP
>NZ_CP047984.1|WP_161888995.1|1968268_1968457_-|hypothetical-protein
MSNKLLLGLLLTVLLFVTVMLGMAKVSEQDRKDQERASQEQVAPPAVPEAPAPPAAEAGERQ
>NZ_CP047984.1|WP_161888996.1|1968508_1968880_-|GntR-family-transcriptional-regulator
MEFKENQAIYLQIANRFFENILKKKWDSGDKIPSIRDMAVEFEVNPNTTMRTFNYLQDKGIIYNKRGIGYFLADDGFERTIAIKREQFLEEDLPVFFKTMQLLGIKLDDLKAYIKEKPELNVQ
>NZ_CP047984.1|WP_161888997.1|1968881_1969619_-|hypothetical-protein
MNTELNLNRLGFFLRRQLYLNFSTMWIAIAAILGLLLITSALFASIDSDADTVLKLRNLYLVVFMLGGYIFTSKVFDEMHAPQKSYMFLTLPVSATEKLLAAWLITSPLYVLVAGLMMLLLSFFSSLIAGNVEALPSLFDEVFFNCVGVYMVTQAVFFLGATTFRGNNCLKTLLALIVVAMLIGAYSAGLGYLLFGHSNYGGGPSEEFRETAEYIFANIIPLLFWWVLAPFLLLVSYFKLKERQV
>NZ_CP047984.1|WP_161888998.1|1969623_1969821_-|hypothetical-protein
MNTNLKKLRQQLMHLCLKAGSPLIAVIAVSCALLVETGHVDYTYPLELVLQGIVNDSVILTIPTK
>NZ_CP047984.1|WP_161888999.1|1969810_1970662_-|ABC-transporter-ATP-binding-protein
MIALKNIHFRYKKKKPLFENLNLTLEPGFIYGLLGKNGAGKSSLLKLISGLLFPDSGECTVLGYDAPARQPAMLEDIYLIPEEFNLPPVSLNGYVKTNGVFYSKFSYNQLQAYLAEFELDEAAKLSTLSYGQKKKFLIAFGLATNARLLILDEPTNGLDIPSKSQFRKIMAASLDEEKTIIISTHQVRDLENLIDNVVVLEHGDIIFNRNMAEISEKLAFEYNLAGVPADEVLYAEEMQGRKAGIVKNIPGHDARVDLELLFNGVVKNAAGINAHFANYKYEY
>NZ_CP047984.1|WP_161889000.1|1971044_1971773_-|6-phosphogluconolactonase
MMVHIYKDTSELLSGLAAFFVKSAREAIENHGQFNVALSGGNSPKKLYELLASEEFRQQVAWDKVYFFFGDERYVPADDPENNARMAREAMFAPLHIPEAQIFKVDTMLPPEQAAETYEKRLNGHFNGNPARFDLILLGLGDDAHTASLFPGTPVLQEQAASVKAVFLESKQVYRISLTAPLINQAKDVAFLVYGAGKANAVQQVLEGERNITKYPAQLVQPQQGDVHWFLDEAAAALLRNK
>NZ_CP047984.1|WP_161889001.1|1971776_1973300_-|glucose-6-phosphate-dehydrogenase
MHTTISARQTQPAIFVIFGGTGDLNKRKLAPAIYNLFLENSLPADFALIGTGRTRLTDGEFSKSLLEGVNTFSRRGKVEKKQWDQFCGHIHYQVADLLQESTYVELGQRIGQLQAEWEQEALVIFYLAVAPNFFPVIAKNIAQHQLAENADNARIVVEKPFGRDLESARDLNVLLGELFEEKQIYRIDHYLGKETVQNIMAFRFANLLFEPLWNRNFIDHVQISVTEQLGVGDRGGYYEEAGALRDMVQNHLLQLLCLIAMEAPTSFAADEVRNRKVDVLHAMRRFSAEDVRMNAVRGQYGPGWMEGKEVPGYREEDGVDPESNTETFVAINFFIDNWRWQGVPFYVRTGKRLHQKASTIAIQFKDVPHSIFPPEATETWQQNRLIISIQPEMSIRLQLQAKRPGLEMTLNTVDMVFDYKGTYSDEAPEAYETLLLDTLVGDQTLFMRADQVEAAWELVMPILHAWQAKKSLNFPNYSSDSWGPEVAEGLIARDGFHWFTLPVNRKG
>NZ_CP047984.1|WP_161889002.1|1973427_1974876_-|NADP-dependent-phosphogluconate-dehydrogenase
MNPDQNSNTGNVFGMIGLGTMGRSLLLNIADSGFAVAGYDKDTLKVDALKQEGAPYQVEGFASLPDFVNSLKKPRAIMMLVPAGPIVDSVVEEVLPLLDQGDILIDGGNSHFTDTTRRDTALEAKGFHFFGMGISGGEEGARRGPSMMPGGDIEAYEIVRPILEAVAARVNNEPCVTYIGPGAAGHFVKMVHNGIEYGLMQLIAETYEILRKGLQMDNASIHRLFAQWNEGRLQSYLLEITRDIFAFKEPGTESFLIDDIYDVARSKGTGKWTSQVAMDLELPVPTIDVAVAMRDLSKYKELRVKADALYTVEQPNRFATERRDKTLQYLEQAFYFSMITTYAQGMHLLAKASAAYGYQLQLDQIAKIWRGGCIIRAAFLEDIYTAYQQNKELPHLLLDPYIKGLVQETAPGMREVVAAAALSGVATPAFAATLSYFDNFRNGSMPSNLIQAQRDFFGAHTYEVIGREGIFVHSAWLPDALD
>NZ_CP047984.1|WP_161889003.1|1974927_1976043_-|transaldolase
MEKNHVKRIHDFGQSIWLDFIDRRIMDTGELQRLMDEDGVRGVTSNPAIFEKAISSSSDYDADIKELSRENLSNEDVFYRLAVRDIKRAADLFKPVYEEEERGADGYISLEVSPHLARDTEGTIRQARELWKAVDRENVMIKIPGTAEGLPAIRTCISEGININITLLFSLNRYEEVADAYISGLEDRLKQNQRIDHIASVASFFLSRIDVIVDPLLKEKGLNQLYGQVAIASAKKAYELYKRIFSSERFKKLEAKGARPQRLLWASTSSKNPDFADTKYVEALIGPDTVNTIPLDTLAAFKDHGHAANTLEDDLDKATRTLAQLEEAGISLDDITQRLEDEGIEKFNKPYDKLLEAIGQQKEKVMASGKS
>NZ_CP047984.1|WP_161889004.1|1976046_1976502_-|RpiB/LacA/LacB-family-sugar-phosphate-isomerase
MKIGIAADHGGYDLKEVIRPFLTGVGYKLTDFGATRLDNADDYPDFVVPLARAVAAGHVERGIAICGSGVGAAIAANKVPGVRAALIHEHFSAHQGVEDDEMNLLCLGGRVTGVNAAQELIVAFLEAKFTGAERHLRRLQKVQQLENKELR

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Crispr_ID: NZ_CP047984_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP047984_3

2939414-2939571

Orphan

Consensus_repeat	Method
TTCAATCGCACCTATATGGTATA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP047984_3

>merge|NZ_CP047984|3|2939414-2939571|CRISPRCasFinder
TCCTTTGTCACCTATATGGTATAGAAAGGCGCCTTCTCCATCAATCACATGGCGGACCTGGAGGAGTTTCAATCGCACCTATATGGTATAGAAAGCTGGAACAGCGGGGCTTATTGTGCGGTACGGGAACCAGGCTTCAATCGCACCTATATGGTGTA

>NZ_CP047984|3|1|2939414-2939571|CRISPRCasFinder
TCCTTTGTCACCTATATGGTATA	GAAAGGCGCCTTCTCCATCAATCACATGGCGGACCTGGAGGAGT
TTCAATCGCACCTATATGGTATA	GAAAGCTGGAACAGCGGGGCTTATTGTGCGGTACGGGAACCAGGC
TTCAATCGCACCTATATGGTGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP047984.1\|WP_161891429.1\|2942236_2943262_+\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP047984.1\|WP_161889725.1\|2944348_2944774_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239550
NZ_CP047984.1\|WP_161889723.1\|2940216_2941986_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP047984.1\|WP_161889727.1\|2947016_2949224_-\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350149
NZ_CP047984.1\|WP_161889726.1\|2945370_2946627_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161889728.1\|2949426_2949570_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375991
NZ_CP047984.1\|WP_161889714.1\|2930519_2930717_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234967
NZ_CP047984.1\|WP_161891428.1\|2934587_2935076_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|140006
NZ_CP047984.1\|WP_161889715.1\|2930822_2931668_-\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP047984.1\|WP_161889719.1\|2935172_2935781_+\|fatty-acid-hydroxylase	unknown	unknown	gnl\|CDD\|178053
NZ_CP047984.1\|WP_161889729.1\|2949577_2949727_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161889730.1\|2949810_2951373_-\|xylanase	unknown	unknown	gnl\|CDD\|373145
NZ_CP047984.1\|WP_161889722.1\|2939701_2940220_-\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|336409
NZ_CP047984.1\|WP_161889718.1\|2933336_2934428_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|372725
NZ_CP047984.1\|WP_161889713.1\|2930210_2930498_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161889716.1\|2931664_2932522_-\|dihydropteroate-synthase	unknown	unknown	gnl\|CDD\|273657
NZ_CP047984.1\|WP_161889724.1\|2943498_2944356_+\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236211
NZ_CP047984.1\|WP_161889720.1\|2936663_2938175_+\|malate:quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|377591
NZ_CP047984.1\|WP_161889721.1\|2938644_2939280_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP047984.1\|WP_161889717.1\|2932566_2933112_+\|DUF1599-domain-containing-protein	unknown	unknown	gnl\|CDD\|377892

Protein	Function_ID	Function_description	E-value
NZ_CP047984.1\|WP_161891429.1\|2942236_2943262_+\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP047984.1\|WP_161889725.1\|2944348_2944774_+\|hypothetical-protein	gnl\|CDD\|239550	cd03467, Rieske, Rieske domain; a [2Fe-2S] cluster binding domain commonly found in Rieske non-heme iron oxygenase (RO) systems such as naphthalene and biphenyl dioxygenases, as well as in plant/cyanobacterial chloroplast b6f and mitochondrial cytochrome bc(1) complexes. The Rieske domain can be divided into two subdomains, with an incomplete six-stranded, antiparallel beta-barrel at one end, and an iron-sulfur cluster binding subdomain at the other. The Rieske iron-sulfur center contains a [2Fe-2S] cluster, which is involved in electron transfer, and is liganded to two histidine and two cysteine residues present in conserved sequences called Rieske motifs. In RO systems, the N-terminal Rieske domain of the alpha subunit acts as an electron shuttle that accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron in the alpha subunit C-terminal domain to be used for catalysis.	6.34003e-05
NZ_CP047984.1\|WP_161889723.1\|2940216_2941986_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP047984.1\|WP_161889727.1\|2947016_2949224_-\|family-43-glycosylhydrolase	gnl\|CDD\|350149	cd18828, GH43_BT3675-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 alpha-L-arabinofuranosidases (BT3675;BT_3675). This glycosyl hydrolase family 43 (GH43) subgroup includes the Bacteroides thetaiotaomicron VPI-5482 alpha-L-arabinofuranosidases (EC 3.2.1.55) (BT3675;BT_3675) and (BT3662;BT_3662). It belongs to the GH43_bXyl subgroup of the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. The GH43_bXyl subgroup also includes enzymes annotated as having xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase, EC 3.2.1.8) activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	2.6864e-144
NZ_CP047984.1\|WP_161889728.1\|2949426_2949570_-\|hypothetical-protein	gnl\|CDD\|375991	pfam18565, Glyco_hydro2_C5, Glycoside hydrolase family 2 C-terminal domain 5. Domain 5 is found in dimeric beta-D-galactosidase from Paracoccus sp. 32d, which contributes to stabilization of the functional dimer. It is suggested that the location of this domain 5, may be one of the factors responsible for the creation of a functional dimer and cold-adaptation of this enzyme.	2.82002e-10
NZ_CP047984.1\|WP_161889714.1\|2930519_2930717_+\|hypothetical-protein	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	0.000716862
NZ_CP047984.1\|WP_161891428.1\|2934587_2935076_+\|shikimate-kinase	gnl\|CDD\|140006	PRK13949, PRK13949, shikimate kinase; Provisional.	7.33914e-49
NZ_CP047984.1\|WP_161889715.1\|2930822_2931668_-\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	2.24095e-60
NZ_CP047984.1\|WP_161889719.1\|2935172_2935781_+\|fatty-acid-hydroxylase	gnl\|CDD\|178053	PLN02434, PLN02434, fatty acid hydroxylase.	1.17087e-39
NZ_CP047984.1\|WP_161889730.1\|2949810_2951373_-\|xylanase	gnl\|CDD\|373145	pfam14587, Glyco_hydr_30_2, O-Glycosyl hydrolase family 30.	0
NZ_CP047984.1\|WP_161889722.1\|2939701_2940220_-\|GyrI-like-domain-containing-protein	gnl\|CDD\|336409	pfam06445, GyrI-like, GyrI-like small molecule binding domain. This family contains the small molecule binding domain of a number of different bacterial transcription activators. This family also contains DNA gyrase inhibitors. The GyrI superfamily contains a diad of the SHS2 module, adapted for small-molecule binding. The GyrI superfamily includes a family of secreted forms that is found only in animals and the bacterial pathogen Leptospira.	3.59874e-07
NZ_CP047984.1\|WP_161889718.1\|2933336_2934428_+\|DoxX-family-protein	gnl\|CDD\|372725	pfam13781, DoxX_3, DoxX-like family. This family of uncharacterized proteins are related to DoxX pfam07681.	0.00385544
NZ_CP047984.1\|WP_161889716.1\|2931664_2932522_-\|dihydropteroate-synthase	gnl\|CDD\|273657	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase. This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	9.15956e-111
NZ_CP047984.1\|WP_161889724.1\|2943498_2944356_+\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	5.55253e-143
NZ_CP047984.1\|WP_161889720.1\|2936663_2938175_+\|malate:quinone-oxidoreductase	gnl\|CDD\|377591	pfam06039, Mqo, Malate:quinone oxidoreductase (Mqo). This family consists of several bacterial Malate:quinone oxidoreductase (Mqo) proteins (EC:1.1.99.16). Mqo takes part in the citric acid cycle. It oxidizes L-malate to oxaloacetate and donates electrons to ubiquinone-1 and other artificial acceptors or, via the electron transfer chain, to oxygen. NAD is not an acceptor and the natural direct acceptor for the enzyme is most likely a quinone. The enzyme is therefore called malate:quinone oxidoreductase, abbreviated to Mqo. Mqo is a peripheral membrane protein and can be released from the membrane by addition of chelators.	0
NZ_CP047984.1\|WP_161889717.1\|2932566_2933112_+\|DUF1599-domain-containing-protein	gnl\|CDD\|377892	pfam07659, DUF1599, Domain of Unknown Function (DUF1599).	3.23234e-32

>NZ_CP047984.1|WP_161889721.1|2938644_2939280_-|hypothetical-protein
MKTCLLYLLALLLATTAAAQEKFGNITASLGAAEETATEAYVADVRESHAILRFVRPVTVAYKKSPWFLLVVDVPDEKQVVHFTQGQLAEISALVAARDGKTHYLQVTNFFEVYTGRGSTVLDHYFVNSVRFAIRKRHWYRNNALFMVSSRLVDGEHVVRFKLPFAHEGKVCRHLMAAHNLEEDYFEAAPTEFLRLFAPGAGPHLTTRGTD
>NZ_CP047984.1|WP_161889720.1|2936663_2938175_+|malate:quinone-oxidoreductase
MNHSNNSADPDVVLIGAGIMSATLGVLLKELQPDITIEIYERLDMAAAESSDAWNNAGTGHSAFCELNYTPVLADGSIETSKAVKIAESFEVSKQFWAYLIEGDLIKIPGNFIRSIPHMSFVWGDANVRFLDKRYRALTECHLFKGMEYSEDPKQLAEWMPLIMEGRDKSQKVAATRMEIGTDVNFGELTRRMFDYLKELDGVTLHFNHEVRKLKRQPDSRWQIKVKDRASGGKRKVKAKFIFIGAGGGSLHLLEKSDIPEGKGYGGFPVSGQWLKCTNPAVIKKHQAKVYGKAAVGSPPMSVPHLDTRMINGKRELLFGPYAGFSTKFLKSGSYFDLARSIKVNNLRPMMAAGIKNIPLTRYLIDQVRQSPEDRMAALRQYFPNARSEDWKLEMAGQRVQVIKKDPRHGGVLEFGTEVVSAADGSIAALLGASPGASTAVSIMLDLLGRCFKNKLNSAEWQAKLKQMIPSYGEPLGDDARLLEEVREHTSEVLGLKNIEQLH
>NZ_CP047984.1|WP_161889719.1|2935172_2935781_+|fatty-acid-hydroxylase
MKPNHKGRAQIFENPVLERLTRTHISLPITIFVAFAAGLVYYGITHSFIGVIEAVGLFLIGWLLFSLLEYVAHRFLFHMSTDTPAKARIQYTFHGNHHEYPKDKERLAMPPIVSVLVASLLFFVFKLVFGPLVFGILAGLLFGYAMYLFVHYAVHAYAPPKNFLKTLWIHHSIHHYKDPNVAYGVSSPLWDYVLGTMPRRSR
>NZ_CP047984.1|WP_161891428.1|2934587_2935076_+|shikimate-kinase
MMGSGKTTLGRQLAADLHCPFVDLDAYLEQREGRSIAQLFEQEGQERFREMEREALEAVVQEYGHAVISTGGGAPCFFDNIGFMNHHGRTFFLDVPVEEISRRLLASDLQVRPLLAGKTQEEIKSFLLKTLSHRRQFYERAGTTLQGGDISAVLLQQLLNNN
>NZ_CP047984.1|WP_161889718.1|2933336_2934428_+|DoxX-family-protein
MKYISTFCWLFVGVLFIFSGLIKINDPVGTAIKLEEYFEVFSTDISPIFKLFEPYSLFLSIFLSAAEIVLGVALLVRWQLKVVIWALLLMIVFFTFLTFYSAYFNKVTDCGCFGDAIKLTPWESFIKDVVLLAMILVLLFTQEHLRPIMRQASGAVITIITAAISIMVGWYAYEHLPYIDFRAYKIGNNIPTLMQPSAPLRYKYIMTKGGQQEEFETYPTDPAYAFKEMVAINPEDGPKITDFNVWNDTADFTQEVLTGKKLLILVQSVDKAERANFEDINKLVKAAEQQGITPMVITSSSGADFEVFRHELNLAAPYYYGDGTVLKTIIRSNPGILLLQDGTVKGKWHHNDTPDIEEVTALL
>NZ_CP047984.1|WP_161889717.1|2932566_2933112_+|DUF1599-domain-containing-protein
MINQTLQEYDQVVQRCKDTFVKKTQDYGTAWRILRLPSITDQIFIKAQRIRSIQEKGKQLVEDDINGEFVGIINYCIIALMQLHLPPDADMNLSAQEVERQYMHHIEENIKLLNAKNHDYGEAWRDMRVSSITDIILMKLYRTKQIEDNAGQTLISEGVEANYRDMINYAVFALIKLGFAG
>NZ_CP047984.1|WP_161889716.1|2931664_2932522_-|dihydropteroate-synthase
MEAKDTLFSTKSTLNCRGKLLLLDAPLVMGILNVTPDSFYAGSRLRSTEEVLQRAEAMLADGADMLDIGGYSSRPGATDIPVQEEIDRVAPAIEAIAGNFPEAVISVDTFRAAVAEAAVQAGAAIINDIAGGHLDEAMFPTVARLQVPYILMHMRGTPQTMTTLAKYGDVAVEVVDELQEQVARLTQLGVKDIILDPGFGFAKTVSHNFELLRRLDELRVFGLPVLAGLSRKSMVYKTLGIGQADALTGTIALNMVALMKGAAILRVHDVKEAKQTVELYKKTIL
>NZ_CP047984.1|WP_161889715.1|2930822_2931668_-|TIGR00159-family-protein
MIFLFSIGFLEIELLDIIDILLVTVLLYQLYKLLTGSVALKIFLGLLSIYLLYLVVRAAGMELLSIILGQFMGVGVLAAIILFQPEIRRFLLMIGKTTAFNNDRFFRGFPWRREQAEKLSLTPFIEAAKSLAGKNTGALIVFSKSSELKYYAESGDLIDAVISKRLLMSIFNKNSPLHDGAVIISNNRIKAARCILPVSENQEIPASMGLRHRAAIGLTEITDSIVLVVSEETGQIALVRNGQAYRNLSSADLRLKLNQFLFDTDQRATTAPASEKSASAA
>NZ_CP047984.1|WP_161889714.1|2930519_2930717_+|hypothetical-protein
MDLLKNAPLITLLIALNYSLVAVSLVHLIFRTHYTVGQRLTWVVVLWVLPVLGPAAYWLFWLRRN
>NZ_CP047984.1|WP_161889713.1|2930210_2930498_+|hypothetical-protein
MNNIKIKPGQLLLGTVLSWLVISFLAYTTAGLRGEEHLTGTLLQIAFYFSVLLSAEAYISMLLNPQWTRVNFGMVLLLCAPALLYLMWFVSEKLF
>NZ_CP047984.1|WP_161889722.1|2939701_2940220_-|GyrI-like-domain-containing-protein
MKKFFYVMAGLAIVLLVLYTYLGGFTEPEVAVTTSKTIYVAGIPFEGSLKDEDLQGAFRISARLMKSGELIGTLGNIYYNNPDKSADSIRAFIGVIIPDTSVTLPEGYELRVVPGGRKVVHAEANADLALLPRKLYAAVFEYADQENLKLEDFYVEWFPASDRGVVEVPVKK
>NZ_CP047984.1|WP_161889723.1|2940216_2941986_-|ABC-transporter-ATP-binding-protein
MEDKPKNSGIVLDSDVLKRLFTFVRPYIRTFYFIVFLTFALAILGAVRPFLIQYTVDNDILNNDWEGLTRMFVILSVLLVANAIVQYLHTYYAGWLGQNVVRDIRIKLYRHILNLRLKFFDRTPIGTLVTRNVSDVETLSDVFSEGLAAMIGDVLQLVFIVGFMFYIDWELTLVSLSTFPIMIISTYIFKEKIKGTFQEVRTAVAKLNSFVQEHITGMSIVQIFNNEDREMEKFKAINKEHTRANIRSVLYYSIYFPVAEIIGAAGLGLLVWYGAHGVIEDETSLGTLMAFILYIQMFFRPIRMIADRFNTLQLGVVSTERLMRLLDSKEMIPDNGSYAPEKIRGNVSFRNVWFAYQDEDWVLRDLSFEVKAGESVAFVGATGAGKTSVINLLNRFYEINKGEIIIDGHNLQEYDLSVLRHHIGVVLQDVFLFSGSIADNITLGNKAITEKQIWEAADLVGARRFIERLPGGLHYQVMERGATLSGGQRQLISFVRAMVYNPEIIILDEATSSVDSETEELIQYAIDQLMHGRTSIVIAHRLSTIQKADKIIVLDRGELKEMGNHEELLEHNGYYAQLYRMQYKNMIDL
>NZ_CP047984.1|WP_161891429.1|2942236_2943262_+|phenylalanine--tRNA-ligase-subunit-alpha
MVENIQHVAHEIEVAALTNAAELEQFRISYIGRKGRIADLFDNLKQVAPEQRREVGQQLNALKNRAQERFDQAQEQLASAAGTAGDTGFDFTLPPVPNTLGTRHPLSLVRQEIVRIFERIGFNVAEGPEMEDDWHNFSALNFPENHPAREMQDTFFLSENKDKLLRTHTSTVQVRLMENNHPPLRSIMPGRVYRNEAISARAHMVFHQVEGLYVNKGVSFKDLKETLYYFAKEMFGQDTQIRFRPSFFPFTEPSAEIDITCFICKGAGCNICKGSGWVEIGGSGMVDPAVLQSSGIDPGIYSGFAFGMGIERITMLKYQIKDLRLFTENDVRFLRQFEGVI
>NZ_CP047984.1|WP_161889724.1|2943498_2944356_+|3-hydroxybutyryl-CoA-dehydrogenase
MQLEEIRTIGVVGAGTMGQGIAQVCAQAGYKTILFDISAQVLEKAKQTTLKNLDEGIARGKLTESDKDAALGNLSYTGDTLQLSCDVIIEAVVERLEVKQSIFRELASMNPPGTILASNTSSIPITQIAATIPNPERVVGMHFFNPAHIMKLVEVISGAATSPAIAQTIKELAGKLGKTAVMAMDSPGFIVNRVARHFYVEGLKLLEEGVADVETIDRLMRASGFKMGPFELMDLIGVDTNYAVTASMFEAFHYDAKFRPSRLQQQKVDAGHHGRKSGKGFYIYE
>NZ_CP047984.1|WP_161889725.1|2944348_2944774_+|hypothetical-protein
MSKPWALFVLLLLLATACSDGNRVGPHIPDVIVDEQLNVNSQLFPTLRQDGGYAYIPGGYKGILVVRQNAGQYYAFERACPYDPTAACSKVEVDPSNLFIVDDCCGSQFNLQGEVTGGPAVYGLRQYQTALMGSVLYITNQ
>NZ_CP047984.1|WP_161889726.1|2945370_2946627_+|hypothetical-protein
MKKRYLLPFLLFVTLTSCEDEKENPSPQPDAKAVSFNFRLDPLPEETKDFELIISQKDGEVLLDTMLAGRREHELKVNSEDTKFNVTTIYSNPSTKKYSMRTYVQVNPDGWHIDDGINTREEAETVPSKVYYSNAINHKNYGSSRIEFGAIRVELFRFFPLGSSIDDPLILMVEYDRKFKNDLSYLLLADQGKYIFAEVTSPETHVDFSNAGTAIKRKYKRPDGVPPLTSVLFGYTKAGDYSNPVTLYLSSRNPEEYDLQFPQTVVEEFELMLSYMEFGGYIHQYWHVDSTVPEEMPLLPKSDFTVTKSLFNDFQVKFAEDKPSTYDLFWTSRTANLNADWQVFLSPEETTFNMEGFIEKLSATTLKGKSLSDFRLYRVMSQTAKDYTHQSMHNYLNNPQAYSRKELRQYRRIYIFTS
>NZ_CP047984.1|WP_161889727.1|2947016_2949224_-|family-43-glycosylhydrolase
MKGRLYILAAVLGLLATACGKQISGSASESTTAKRSAANTSEQQYEAYLFTYFTGNQKSEEAIRFAISLDGYTYRALNGNMPVIPSEKISSTGGVRDPHILRGADGKTFYMVVTDMVSANGWSSNRAMVLLKSTDLVNWTSSVVNIQKQFPGQEDLLRVWAPQTIYDPEARKYMIYFSMKHGDDPDKIYYAYATADFTALDTAPKQLFFSPTNGASIDGDIIYKDGKYHLFFKTEGDGAGIKVATSDKLTEGYVLRDEYVQQTKDQVEGSGVFKLNNSEDYILMYDVYTKGKYQFTKSKDLQNFTVIDEEVSMNFHPRHGTVLPITAEEAARLMRQWGTTDDVVGSASAKEIKSMNVALDTATRKLYLPLKPGTDLQAFDPRFLKYPGTSVTPQGPQDFASGPVAYMVAVEGQQPETYEVTAKVARNPVLQGYFADPDVMYSEKTGKYYIYPTSDGFTGWSGTYFKTFSSEDLVNWKDEGVILDLNKDVRWADRNAWAPCIIEKKIDGQYKYFYYFTAAQKIGVAVADNPTGPFVDSGSPLIDKLPEGVTGGQQIDPEVFTDSKTGKSYLYWGNGYMAGAELNEDMVSLRPGTTKGMTPDATYREGTTVFYRNGTYYFLWSEDDTRSENYRVRYGTSKTPLGKITAPENNLVIAKDPAAGIYATGHNSVLQLPGRDEWYIVYHRFNYPNGIDMGEAAGYNREVSIDKLEFNPDGSIRQTKPTHEGVQAISKMQNP
>NZ_CP047984.1|WP_161889728.1|2949426_2949570_-|hypothetical-protein
MLESGSLVSHEDYKANKRKALHGKLLAYLQTAQKKGEVKVKRFNRRG
>NZ_CP047984.1|WP_161889729.1|2949577_2949727_-|hypothetical-protein
MNKGLFLLLALLSVGLPQTLQAQQVRKEVLFNDGWKFMKGDVANAEVAC
>NZ_CP047984.1|WP_161889730.1|2949810_2951373_-|xylanase
MSWSIPAIAFCFIGCSDNLPKEDDQTSPSLQTDAVTLSIDASERFQRIDNFGASDAWACQFVGSWPDEKRNAIADLLFSTDTVSSGQPEGIGLSLWRFNIGAGSAQQGEQSGIRDEWRRAESFLEEDGSYNWQRQAGQVWFLKAAQERGVNKFLAFPNSPPVHLTKNGKAFASDAKPNLAPDRYNAYADFLADVIQGVERTQGISFGYISPVNEPQWDWSDGGQEGTPFMNEDIAGIVKALNTSLERRSLKTKIDIAEAGKINYLYEAADKPNRGNQIKAFFDSSSSYYVGDLSHMGKAVSAHSYFTTSPFDQAVAERKKLAAKVASVPGLEFWMSEYCILGDNAGEMDGNKRNLGIDPAIYLARVIHNDLAIANATAWQWWLAVSPYDYKDGLVYIDKDKADGAYYESKMLWALGNYSRFIRPGAVRVDAKLAGSKAEANTLLASSYIDTERNQLITVAVNAGIEPVKIKLAATGATITSIRPYVTAAEEDLKPGDIVSSDSDIILSPRSVTTLVATLQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP047984_1	1.2\|890926\|31\|NZ_CP047984\|PILER-CR	890926-890956	31	KY271397	Klebsiella phage 3 LV-2017, complete genome	34472-34502	8	0.742

1. spacer 1.2|890926|31|NZ_CP047984|PILER-CR matches to KY271397 (Klebsiella phage 3 LV-2017, complete genome) position: , mismatch: 8, identity: 0.742

----atcaggctcaggttgatgattcacaaaacaa	CRISPR spacer
caacat----ctccggttgatgattcaaaaaacgt	Protospacer
    **    *** ************* *****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

345449 : 417458

Only_Syngen_Nebraska_virus(15.38%)

tail,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_161887865.1\|345449_346355_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_161887866.1\|346527_348141_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.2e-143	48.9
WP_161887867.1\|348170_350000_+	membrane protein insertase YidC	NA	NA	NA	NA
WP_161887868.1\|350218_351055_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_161887869.1\|351085_352225_+	DUF2183 domain-containing protein	NA	NA	NA	NA
WP_161887865.1\|352533_353439_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_161887870.1\|354532_355264_-	aquaporin family protein	M1H9L8	Acanthocystis_turfacea_Chlorella_virus	3.8e-31	36.1
WP_161887871.1\|355297_356794_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_161891266.1\|356816_358406_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_161887872.1\|358953_359565_+	HD domain-containing protein	NA	NA	NA	NA
WP_161887873.1\|360088_360931_+	alpha/beta hydrolase	B3VGL1	Mycobacterium_virus	3.4e-07	25.3
WP_161887874.1\|361333_361972_-	phospholipase	NA	NA	NA	NA
WP_161887875.1\|362058_362994_-	ring-cleaving dioxygenase	NA	NA	NA	NA
WP_161887876.1\|363214_363976_-	NUDIX hydrolase	NA	NA	NA	NA
WP_161887877.1\|364089_365745_+	carboxylesterase family protein	G5CSV8	Megavirus	5.9e-40	38.0
WP_161887878.1\|365866_366076_-	alkylphosphonate utilization protein	NA	NA	NA	NA
WP_161887879.1\|366146_367790_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.4e-54	28.6
WP_161887880.1\|368049_370968_-	T9SS type A sorting domain-containing protein	F5B3R2	Synechococcus_phage	9.8e-46	35.1
WP_161887881.1\|371835_373029_+	HD domain-containing protein	A0A1B1IT47	uncultured_Mediterranean_phage	1.9e-11	30.3
WP_161887882.1\|373135_373660_+	transcription elongation factor GreAB	NA	NA	NA	NA
WP_161887883.1\|374045_375170_+	hypothetical protein	NA	NA	NA	NA
WP_161887884.1\|375179_378581_-	hypothetical protein	NA	NA	NA	NA
WP_161891267.1\|378804_379407_-	hypothetical protein	NA	NA	NA	NA
WP_161887885.1\|379571_380681_-	acyloxyacyl hydrolase	NA	NA	NA	NA
WP_161891268.1\|380794_382156_-	hypothetical protein	NA	NA	NA	NA
WP_161887886.1\|383006_383480_+	hypothetical protein	NA	NA	NA	NA
WP_161887887.1\|383484_384381_-	sulfotransferase domain-containing protein	NA	NA	NA	NA
WP_161887888.1\|384501_385137_+	adenylyl-sulfate kinase	NA	NA	NA	NA
WP_161887889.1\|385491_386883_-	DUF4038 domain-containing protein	NA	NA	NA	NA
WP_161887890.1\|387359_391481_-	PAS domain S-box protein	Q6XLV6	Feldmannia_irregularis_virus	7.4e-23	24.4
WP_161887891.1\|391522_393073_-	GAF domain-containing protein	B5LWN8	Feldmannia_species_virus	7.5e-21	28.1
WP_161887892.1\|393589_394168_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_161887893.1\|394289_394697_+	hypothetical protein	NA	NA	NA	NA
WP_161887894.1\|394836_395715_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_161887895.1\|396135_396552_+	hypothetical protein	NA	NA	NA	NA
WP_161887896.1\|396760_397555_+	aminotransferase class I and II	NA	NA	NA	NA
WP_161887897.1\|397532_397916_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_161887898.1\|398125_399313_-	XdhC family protein	NA	NA	NA	NA
WP_161887899.1\|399725_400265_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_161887900.1\|400487_401243_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_161887901.1\|401258_401501_+	molybdopterin converting factor subunit 1	NA	NA	NA	NA
WP_161887902.1\|401513_401930_+	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA
WP_161887903.1\|402030_404700_-	cation-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	6.1e-71	29.2
WP_161887904.1\|404907_405801_+	magnesium transporter CorA	NA	NA	NA	NA
WP_161887905.1\|406007_407171_+	acetylxylan esterase	NA	NA	NA	NA
WP_161887906.1\|407585_408614_-	phosphotriesterase	NA	NA	NA	NA
WP_161887907.1\|409036_409501_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	2.7e-27	44.4
WP_161887908.1\|409470_410772_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	5.4e-89	43.1
WP_161887909.1\|411046_411628_+	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_161887910.1\|411639_412911_+	hypothetical protein	NA	NA	NA	NA
WP_161887911.1\|412942_414379_+\|tail	phage tail sheath family protein	NA	NA	NA	NA
WP_161887912.1\|414405_415455_+	hypothetical protein	NA	NA	NA	NA
WP_161887913.1\|415498_416488_+	hypothetical protein	NA	NA	NA	NA
WP_161887914.1\|416519_416981_+\|tail	phage tail protein	A0A059XEM3	uncultured_phage	4.8e-24	47.3
WP_161887915.1\|416993_417458_+\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_2

4531328 : 4605008

Mollivirus(25.0%)

integrase,tRNA,transposase

attL 4600775:4600790|attR 4610320:4610335

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_161890925.1\|4531328_4532303_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_161890926.1\|4532381_4532921_-	copper resistance protein NlpE	NA	NA	NA	NA
WP_161890927.1\|4533319_4534228_-	EamA family transporter	NA	NA	NA	NA
WP_161890928.1\|4534304_4535096_-	queuosine precursor transporter	NA	NA	NA	NA
WP_161890929.1\|4535642_4536077_+	DoxX family membrane protein	NA	NA	NA	NA
WP_161890930.1\|4536066_4536984_-	ribonuclease Z	NA	NA	NA	NA
WP_115567158.1\|4536998_4537376_-	STAS domain-containing protein	NA	NA	NA	NA
WP_161890931.1\|4537421_4538378_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	5.3e-25	32.9
WP_161890932.1\|4539148_4540474_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA
WP_161890933.1\|4540488_4541550_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_161890934.1\|4541971_4542646_+	hypothetical protein	NA	NA	NA	NA
WP_161890935.1\|4542801_4543947_-	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_161890936.1\|4543939_4545271_-	aspartate kinase	NA	NA	NA	NA
WP_161890937.1\|4545437_4546640_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
WP_161890938.1\|4546729_4548046_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA
WP_161890939.1\|4548103_4548718_-	dethiobiotin synthase	NA	NA	NA	NA
WP_161890940.1\|4548714_4549851_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_161890941.1\|4549927_4550926_-	biotin synthase BioB	NA	NA	NA	NA
WP_161890942.1\|4551184_4551811_-	HAD family hydrolase	NA	NA	NA	NA
WP_161890943.1\|4551986_4553300_-	toxin-antitoxin system YwqK family antitoxin	NA	NA	NA	NA
WP_161890944.1\|4553636_4554821_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA
WP_161890945.1\|4555027_4555483_-	PaaI family thioesterase	NA	NA	NA	NA
WP_161890946.1\|4555606_4556002_+	hypothetical protein	NA	NA	NA	NA
WP_161890947.1\|4556011_4556974_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_161890948.1\|4556970_4557942_-	VWA domain-containing protein	NA	NA	NA	NA
WP_161890949.1\|4559552_4562723_+	penicillin-binding protein	NA	NA	NA	NA
WP_161891532.1\|4562889_4563618_-	ATP-binding protein	NA	NA	NA	NA
WP_161891533.1\|4564481_4565609_+	DUF5009 domain-containing protein	NA	NA	NA	NA
WP_161891534.1\|4566074_4566251_-	CsbD family protein	NA	NA	NA	NA
WP_161890950.1\|4567343_4568108_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_161890951.1\|4568225_4569491_+	thioredoxin fold domain-containing protein	NA	NA	NA	NA
WP_161890952.1\|4570004_4570259_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_161890953.1\|4570442_4570829_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_161890954.1\|4571823_4573470_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_161890955.1\|4574343_4574517_+\|transposase	transposase	NA	NA	NA	NA
WP_161890956.1\|4574468_4574669_+	hypothetical protein	NA	NA	NA	NA
WP_161890957.1\|4574711_4575071_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_161890958.1\|4575547_4577170_+	hypothetical protein	NA	NA	NA	NA
WP_161890959.1\|4577194_4579405_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	2.7e-40	30.6
WP_161890960.1\|4579459_4580812_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_161890961.1\|4581860_4585055_+	TonB-dependent receptor	NA	NA	NA	NA
WP_161890962.1\|4585109_4586642_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_161890963.1\|4586760_4590093_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_161890964.1\|4590147_4593624_+	VCBS repeat-containing protein	NA	NA	NA	NA
WP_161891535.1\|4593724_4595035_+	vanadium-dependent haloperoxidase	NA	NA	NA	NA
WP_161890965.1\|4595401_4595905_+	phosphoheptose isomerase	NA	NA	NA	NA
WP_161890966.1\|4596034_4596967_+	NAD(+) diphosphatase	NA	NA	NA	NA
WP_161890967.1\|4596977_4597394_-	cytochrome c	NA	NA	NA	NA
WP_161890968.1\|4597380_4598073_-	SCO family protein	NA	NA	NA	NA
WP_161890969.1\|4598056_4598494_-	hypothetical protein	NA	NA	NA	NA
WP_161891536.1\|4598812_4599232_-	DUF2267 domain-containing protein	NA	NA	NA	NA
WP_161890970.1\|4599621_4599951_-	DMT family protein	NA	NA	NA	NA
WP_161890971.1\|4600112_4600751_+	ATP-binding protein	NA	NA	NA	NA
4600775:4600790	attL	NA	NA	NA	NA
WP_161890972.1\|4601030_4602989_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	3.4e-135	45.3
WP_161890973.1\|4603066_4603450_-	hypothetical protein	NA	NA	NA	NA
WP_161890974.1\|4603535_4605008_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	1.1e-29	30.4
4610320:4610335	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP047984

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection