CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019796	Rhodothermus marinus strain AA2-13	14 crisprs	csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,c2c9_V-U4,cas14j,WYL,cas6,cas8b1,cas4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,cas3HD,DinG	1	33	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019796_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_1

90010-90102

Orphan

Consensus_repeat	Method
CGGCGGCCCTTGCAGGTCTCGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019796_1

>merge|NZ_AP019796|1|90010-90102|CRISPRCasFinder
CGGCGGCCCTTGCAGGTCTCGCAGGTCACGTGCACGTCCGGCAGGAAGTTCATCTCCAGCTTCACCACGCCGGCGCCCTTGCAGGTCTCGCAG

>NZ_AP019796|1|1|90010-90102|CRISPRCasFinder
CGGCGGCCCTTGCAGGTCTCGCAG	GTCACGTGCACGTCCGGCAGGAAGTTCATCTCCAGCTTCACCACG
CCGGCGCCCTTGCAGGTCTCGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161540030.1\|85110_86994_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_AP019796.1\|WP_014065810.1\|80803_82144_-\|thymidine-phosphorylase	unknown	unknown	gnl\|CDD\|180276
NZ_AP019796.1\|WP_161540029.1\|82145_84659_-\|glycoside-hydrolase-family-9-protein	unknown	unknown	gnl\|CDD\|199881
NZ_AP019796.1\|WP_161540031.1\|87501_88011_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540026.1\|76105_76534_-\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|213395
NZ_AP019796.1\|WP_161540027.1\|76536_78042_-\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|236447
NZ_AP019796.1\|WP_012842604.1\|93166_93484_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540034.1\|96295_97354_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274305
NZ_AP019796.1\|WP_161552222.1\|102376_105142_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_AP019796.1\|WP_014065812.1\|84776_85028_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|376487
NZ_AP019796.1\|WP_012842611.1\|105242_106028_+\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755
NZ_AP019796.1\|WP_161540035.1\|97373_99704_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|274856
NZ_AP019796.1\|WP_161552221.1\|102078_102261_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540028.1\|78295_80800_+\|zinc-carboxypeptidase	unknown	unknown	gnl\|CDD\|349457
NZ_AP019796.1\|WP_161540036.1\|99974_100973_-\|voltage-dependent-potassium-channel-subunit-beta	unknown	unknown	gnl\|CDD\|381369
NZ_AP019796.1\|WP_161552805.1\|101038_101977_-\|3-methyladenine-DNA-glycosylase	unknown	unknown	unknown
NZ_AP019796.1\|WP_014065819.1\|92492_93086_+\|MarC-family-protein	unknown	unknown	gnl\|CDD\|225006
NZ_AP019796.1\|WP_161540025.1\|74527_76105_+\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_AP019796.1\|WP_161542333.1\|88282_89368_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271326
NZ_AP019796.1\|WP_161540033.1\|93564_96012_-\|glycoside-hydrolase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379625

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161540030.1\|85110_86994_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_AP019796.1\|WP_014065810.1\|80803_82144_-\|thymidine-phosphorylase	gnl\|CDD\|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_AP019796.1\|WP_161540029.1\|82145_84659_-\|glycoside-hydrolase-family-9-protein	gnl\|CDD\|199881	cd02850, E_set_Cellulase_N, N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.	1.63695e-20
NZ_AP019796.1\|WP_161540026.1\|76105_76534_-\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|213395	cd12152, F1-ATPase_delta, mitochondrial ATP synthase delta subunit. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.	4.07885e-45
NZ_AP019796.1\|WP_161540027.1\|76536_78042_-\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_AP019796.1\|WP_161540036.1\|99974_100973_-\|voltage-dependent-potassium-channel-subunit-beta	gnl\|CDD\|381369	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR). Voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa are founding members of aldo-keto reductase family 6 member C1 (AKR6C1) and C2 (AKR6C2), respectively. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	0
NZ_AP019796.1\|WP_161540034.1\|96295_97354_+\|hypothetical-protein	gnl\|CDD\|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	2.00129e-13
NZ_AP019796.1\|WP_161552222.1\|102376_105142_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.94838e-86
NZ_AP019796.1\|WP_014065812.1\|84776_85028_-\|50S-ribosomal-protein-L31	gnl\|CDD\|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	3.08907e-31
NZ_AP019796.1\|WP_012842611.1\|105242_106028_+\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.25071e-10
NZ_AP019796.1\|WP_161540035.1\|97373_99704_+\|S8-family-serine-peptidase	gnl\|CDD\|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	7.5179e-17
NZ_AP019796.1\|WP_161540028.1\|78295_80800_+\|zinc-carboxypeptidase	gnl\|CDD\|349457	cd06238, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	6.84337e-107
NZ_AP019796.1\|WP_014065819.1\|92492_93086_+\|MarC-family-protein	gnl\|CDD\|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	7.63581e-34
NZ_AP019796.1\|WP_161540025.1\|74527_76105_+\|chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.48867e-40
NZ_AP019796.1\|WP_161542333.1\|88282_89368_+\|hypothetical-protein	gnl\|CDD\|271326	cd14956, NHL_like_3, Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.69357e-05
NZ_AP019796.1\|WP_161540033.1\|93564_96012_-\|glycoside-hydrolase-N-terminal-domain-containing-protein	gnl\|CDD\|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	6.78563e-57

>NZ_AP019796.1|WP_161542333.1|88282_89368_+|hypothetical-protein
MWVVVAGAFLCGCGAEKPAEVRAMLVPVDTIHLQEPDTLFLGEFLWVEVELQPFRLYVPDLRLRRVVVYDSLGRPVQVIGRPGTEAPGTLYRAVQVLVHGELVYVQQEYSRVSRFTKTGRFIDRPQLPEGYGLNAGFRSLDEGHLVVPSVAMSEPCSSWLEPACEETRAFSVVDTGLNQVVYRFGVYPQLYQEGNYVPRRAATDVLPEARLAAAVYELSSELQLYFLGEREGRLVRRIVLRHPAWRDPPEDMRAELAVNDRARFNELMLQSSFMKRVFFVADTLVLAHFFNLKPLYFELQGWDDRKVMPYGVLASISGRWQQPLDMPGLVLGRDEAFHLYIRLSDEPDRRLIGRFRVEVRR
>NZ_AP019796.1|WP_161540031.1|87501_88011_+|hypothetical-protein
MSAVQKIGLGLLLLALSWGLHAWRLHRSVPEVPFPSEALVPVWTPAENSEPTDAAGEVLLFFSPNECGQTVARTARAWVEGAHALGFRVVGILEDRGRELARRYAAVMGFPFGVWWDSLGWYGRHFGEAALPRALVRREGRVVGELGPEVLRTVGDASSVRLLLLGDHR
>NZ_AP019796.1|WP_161540030.1|85110_86994_-|phosphomethylpyrimidine-synthase-ThiC
MIPKPPAAIRRVYVQGNRYPELRVPFKEVQLSPTRLPDGSLEPNDPVLLYDTRGPWGDPDFHGDIRQGLPPLRRPWIEARGDVEEYDGRPVQPIDDGYRNEEERRRAEQRGKLHRWPGPRRRPLRGKNGAAVTQMYYARQGIITPEMEFVAIRENQRRERLIELQKEPGDRWSLAFQHPGQPWGAQIPPVITPEFVRDEVARGRAIIPCNVNHPECEPMIIGRNFLVKINANIGTSAVSSSIDEEVEKLLWAIYWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVGGKPEELTWEIFRDTLIEQCEQGVDYMTIHAGVRLAYIPLTANRRTGIVSRGGSIIAKWCLAHHRENFLYTHFEEICEILRQYDVSISLGDGLRPGSIQDANDEAQFAELKTLGELTRIAWKYDVQVMIEGPGHIPMHLIKENVDRELEDCYEAPFYTLGPLVTDIAPAYDHITSAIGAAMIGWYGAAMLCYVTPKEHLGLPNKNDVREGVIAYKIAAHAADLAKGHPGAQYWDNALSKARFEFRWEDQFNLSLDPERAREYHDETLPAEGAKLAHFCSMCGPKFCSMKITEEIRAMAAEKGVDARQVIEEGLEEKAREFRAKGAEIYTAP
>NZ_AP019796.1|WP_014065812.1|84776_85028_-|50S-ribosomal-protein-L31
MKKGLHPEYNLITVRLADGTEFQIRSTMKGPVYVSDVDATNHPFYTGVRQFVDRAGRVEKFMRRYGKVTSQGHQKPEAEEEGK
>NZ_AP019796.1|WP_161540029.1|82145_84659_-|glycoside-hydrolase-family-9-protein
MRRYLLLLSWLLVRPGFGQSEGFVLNEREYFEREGVSVMVFQDFYPEGHQSGVTLIQHGERVAANGDVRLEATPGQWQPVPRLLRREVHPERNEVVAYLAYPDPERDRKGFNPIFYPDLHLTYRVRVRGEADGVRIIVDLDEPLPEAWAGRVGFNLELFPGALFGKSWYMDDAAGIFPRQPNGPVRVNDAGEVEAVPLATGRRLLVAPESDALRLEIESLRGELVLYDGRVQHDNGWFVVRTTIPAGVTTNALEWVVRPHVIPGWRYGPVLQVSQVGYHPRQPKVAVLELDARDDLQGTVYLLRLGNDGATDTVLAGPPVPWNGRFLRYRYAHFDFSHVTRPGLYVLTFRDVRSHPFRIAPDVYQRHVWQPTLEFFLPVQMCHMRVEQQYRVWHGACHLDDARMAPPDTNHIDGYVQGPELRAPYAPGEHVPGLNVGGWHDAGDNDLRIESQADEVFILATMYELFDVLKTYDNTTINQRRRLTQIHQPDGRPDVLQQIEHGVLSILGGYRALGRLYRGIIAPTLKQYVLIGDPANSTDNRVYDPSVPPETLSALRVDARDPRWVVTTADDRWVFTESNPAHEYKGIAALAAAGRVLRSYNPELARACVEAAEALWQQERDTSRGFNERVVAAVELFRTTGRDLYRRTLLNDRNRIVARIGSVGWAVGAILPTLGDSAFAEAVRAAVARYMDDVHRLQQENPYGVPYRPRIWGAGWDIQRFGVRQYLLHRAFPDLVPPDYVFNALNFVLGVHPGRNTAAFASGVGARSVTVAYGFNRADWTYIPGGVVSGTALIRPDFPELKEFPYLWQQAEYVMGGGATHFMLLVLAADQLLNATH
>NZ_AP019796.1|WP_014065810.1|80803_82144_-|thymidine-phosphorylase
MPDVVELIITKRDGGHLAPNDLRWLVQAYTHDEVPDYQMSAFLMAAFIRGLNEAEMDALTDAMLHSGRVLDLSDLPGRKVDKHSTGGVGDKVSLILAPLVAACGVPVPMISGRGLGHTGGTLDKLESIPGLRTDLSIEAFRRQLRELGVVMIGQTDEIAPADRKLYALRDVTGTIESIPLIAASILSKKLAEGADALVFDVKCGRGAFMQQEADARRLAETLVGIATRAGRPAVAWLTDMNVPLGRAVGNWPEVVESLRALRGDFEGIEDLIEVTLALAGEMLWLGGVAETPEAGRRLARAALTDGRAFERFCAMVRAQGGDVRVLERPETRPDAEPAGEVRAPDGIRGYVADLDARAVGRLAVHLGAGRRVKEDPVDPTAGLVLHRKPGDPVAPGDVLATLYTHRRDRLEDFQQALLAAYRFAETPPPARPLLLARYAEGRWRTP
>NZ_AP019796.1|WP_161540028.1|78295_80800_+|zinc-carboxypeptidase
MQKIRRACLLVALGLAPALAAQPLQSPEEFLGYPPGARFTPHHRVVDYFEYVARTSPRVQLVQYGETYEGRPLLLAIISSPENLARIEALREDNLRRAGRLSGTPDPDGPVFVWLSYNVHGNEAVSTEAALLTLYALAHPDSQRTDAWLKQAVVLLDPCLNPDGRERYVQWYHRMLGVRPDPDPVAREHHEPWPGGRTNHYYFDLNRDWAWGTQQETQARLAVYHRWMPQIHVDFHEQGVDEPYYFAPAARPIHPLITDWQRALQDTIGRNHARYFDADGRLYFTREVFDLFYPGYGDTWPTFNGAIGMTYEQGGGGRAGLAIRTAEGDTLTLAERIRNHYTTGLSTIETAVRQRRTLLDRFARYFAEAQAQPAGRYRAFLIRGDAHPDRLAALTALLDRQGIRYGTLARTRTVEGLDYATGTRQRVEARPGDLVVSVYQPAGTLARVLFDPDPVLPDSLTYDITSWTLPYAFELEAYALSERLEPDRPGWARPTPTPPSEAQPYAYLVRWGGLDAARFLADVLRRGVRVRVTEVPLTLNGRRFEAGTLILTRAGSEHLGTRFDRIVREAADRWHQQLYTTRTGFVDEGPDLGSARVRFLRKPRVYLLAGPPASAYAVGEIWHFFDQVLHYPVTLVERDELDELLLDEGDVLILPHGFYNAREMPLESLLEGVRRGARLIALEGALDLLAGQQGVALKRRQGDDSEQDTAARPRRYAMREREAISDQVPGAVYRVQLDPTHPLAFGLARYFTLKRSTRAYELLEDGWNVAWLEDGRPRSGFAGYRTVERLRETLVVGTQRLGRGTLVFFVDDPLFRGFWHAGQLLFANAVFFGE
>NZ_AP019796.1|WP_161540027.1|76536_78042_-|F0F1-ATP-synthase-subunit-beta
MEIKTDQAVGRVVQIIGPVVDVEFPEGHLPEIYDALVITLEDGSELVLEVEQHLGENRVRAIAMDSTDGLTRGTPVRNLDRPISVPTGTEIRGRLFNVVGQAIDGLPQPKAEGYRPIHAPAPPFEELATRVEMLETGIKVIDLIQPVMRGGKVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFAGVGERTREGNDLLREMLESKVIRYGEEFLESMKAGGWDLSKVDFEELKKSQATLVFGQMNEPPGARARVALTGLAIAEYFRDLGGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERITSTKHGAITSFQAIYVPADDLTDPAPATTFAHLDATTVLSRQLAAQGIYPAVDPLESTSRILDPNIVGEEHYRVAQEVKQILQRYKELQDIIAILGMDELSEEDKLVVHRARRVQRFLSQPFFVAEQFTGIPGKYVKIEDTVRGFRMILDGELDHLPERAFLLRGTIEEVIEAGEKMLKEAEA
>NZ_AP019796.1|WP_161540026.1|76105_76534_-|F0F1-ATP-synthase-subunit-epsilon
MARTLFVEIVAPDRRVFRGEALSVRAPGVEGSFEVLYNHAPMVAAITVGPIFVTTPSGERITFATSGGFVEVLGNTVTILAETAEPASEIDIERARAAEQRALERLQKAQTPEERAEAEAALERARNRLRVAMGQVGQRIHP
>NZ_AP019796.1|WP_161540025.1|74527_76105_+|chemotaxis-protein
MEVAEKETKLATAALHPEVAETFHALQQVITRAAIGAARTAQRLERIGQQFSEARAGVEASARAVQQIRQRVEAVAESARSTADVAHQVARLTEEGRQQSDASQEAVKHLEQQVAAVMERLERLVAQVQGITQISDVIDRIAWKTKLLAFNAGIEAARAGHEGQGFSVLANEIKTLSEDTALQTRQIRALINDLVKELQPVEEAIRQSQELLHTTVEQSDRLEAALQRIHELAGQAAQHMDRVVTTVDAQLQDAEAVGTTLQQALAAVGHVDKEAEHIARDTFTLSELVEDAYGYLGRFEGRSIFHRALALGRELAERSRRIFEQVIDEGRCTLDDVLALEYTEIKGRKAIASLARLFDVSRVPESGFDPPKYSTRYDHLVDEALQQVMDEILEREPRLTFALVIDLNSYAPIHNRRFCQDWTGDPKKDLVGNRIKRFFFDKGVLVRGARVGLPRAAVTLPNRARREDFLRVCDLRERPEERDVFLVQTYARDTGQVLSALTVPLYVKGHRYGAVLLGWDPERVD
>NZ_AP019796.1|WP_014065819.1|92492_93086_+|MarC-family-protein
MNAYLETFLPLFVAINLPGILPFFISMTEGLSAADRRRLLVRAVATAFVVAVLILFAGQLIFETLGITLNDLRVGGGLILLVLSITDLVFADYRRRDPRDGADAADVGVVPLGIPLIIGPAAITTILVAQQTYGYLPTLVSLVANLLLVTVAFAAGPWVIRKLGPVAVRAIAKVASLFLAAIAVAMIRAGVAGMLAG
>NZ_AP019796.1|WP_012842604.1|93166_93484_+|DNA-directed-RNA-polymerase-subunit-omega
MALKTLDIDALAAKTGNLYETVAILSKRARQIATQMKQELDEKLSYFEGLGLEDDPRHQEEQRRISIEYELKPEPTEIAVEEFLRDEIYYRDASKERSEEEEELR
>NZ_AP019796.1|WP_161540033.1|93564_96012_-|glycoside-hydrolase-N-terminal-domain-containing-protein
MDRRDFLKGMGLALVAGPYWLRRALVQPSALSSPFVEARIPERGMYSLQPAARWEEALVAGNGTLGILVYGDPLNERIIFNHELLYEPLRDERVPPPNLAPYLPRIRALMLEGRYREAVAYSLEMARREGWPGLLWTDPYHPAFALVLEMPTETPTEYLRHTAFDTGEIGVFWRTATDTYTRRAFVSRTDGVVVLELSAEAGPLPDLTLHLEVQDVRPPEQREGYHPPEITAAPGWLRYRCAYVHTRRGYEGLVRVEAEGGTQTVRDGRLHVRGARRVLLLVRVWPLDDVAASRLAEEQAALAALPADYDLLFAPHAAAHGALFRRMTLDLEAGDDRRKSSETLLAEQRARETILPALLEKLFDMGRYVLISSCGHWPPNLVALWTGEWRPPWSGDFTLDANLNLQMAAASIGAVPEAVASLTRLLEGLLDDWRDNARRLYGCEGVLSGSRTDGRCGWHTHFNADYPLHFWTAGAGWLAQPLYEYAEVYGDEAFVREHLIPYLKEVVRFYETFLTVTDAEGHVVFVPSYSPENRPGNLDTPGSINATMDIAVCREVLSTLIALCEARGLEADSLPRWKALLDRLPPYLINEDGALKEWAHPDLADNYNHRHLSHLYPVWPGHEITPEATPELFEAARRAAYLRGHENDSAHGLVHLALIGARLKDPDLAYRSLRDLIRNGYLLPSLFSLHYPGNVYNADLINSLPAIVIEMLLYSRPGLLELLPAVDERLPRGTLHGARARGRLRVERLRWDLPARHVELALVSDTDRTLTLRVRRGIAELQATEGPTPERTSATDATLQLAARTPATLQIRLAG
>NZ_AP019796.1|WP_161540034.1|96295_97354_+|hypothetical-protein
MRKLRWNWSSLWMAGLLLAACSLFEPEKKTRFDYGGDPLPGTENLYNLRLSPDGEWVALIRAYTPERLDPPNQLWLVHRDGQQMRFLGPSIGSADWSPDGKRLALTYEPGLCCDVHVVTLDLESGQVVVWTGADTLLLSHPTASFPHWFQDGQRLLVSVIGKAYGQLYETGIYVLNLVHRQVEGPLVKSMVGAQLGGRDRFAVGIMPQPQGRVYRENAVRYEFATGALTVLTDFGPEEAFRFEATPSPVEDLIVLERRVEGVPQLFLMDGKGRILRQLTERGGHNPRWSYDGRAVLFLRDVEAGPGARNVPFVYWLDEDREEPLWPMLPDSVPAFPALDTLLAQCMLCGKLP
>NZ_AP019796.1|WP_161540035.1|97373_99704_+|S8-family-serine-peptidase
MYRGYNLGQAMTLTLLMIIGLQEGRAQIIPNDPLFPQQRPYLSEIHRIDQAWQISRGSSSTRIGIYSFVGLRTSHEDLQGRVLAPVGINEHPELDVATEMAGIIGANTNNGKGIAGIDWNTRLQFYSLLRPPRADDLLDGRFTIRLPGGANATYYLDLRKASEMLEQGRNNGVHIHLFSFGLPSGKAEDYPLPEPPQTWEYLNMPRPIKLEDIGKKILEAAKKVLQSYCSDAEPFSWILGSCYSPPDPFKLFRESIGRAVQAGGIVIAPAGDLEDENLLPTEFQPGQFEKYAVTVGGVTRDPIRRVVPWAYTRPANYVDVAAFAGPVIGPSGQGDQIYNFSFTSTAAAASIAAGVSALIKAVRPELSGEDVEQILRRTANGYNQPVPNEHMGYGVIDARAALEFVVNNDIQRIKKRVDRVITNAPMPPGGQEWIYLKDFPLQYFPRSYCPYAFYAYGKRYEFTARVEFPRPFEASPQVWVRWADSDGVDTRFKLADGGVPPFAEYIATYDPFWKDLTVISVDRNGFVIKGRYWYVRFYDALGRECTVTNYIPKRPEQFQIAYTAVGRLSSVSPPPAPANLRITNRGAVGAMPRLEWNASPGAEGYYLYRRCANNWTCQNFQRIATTTGTSWIDSGVIQGTYQDYYTYQVTAYNVAGESAPSNQVSTYGAPFTPYSLEALSDSLQLVRWVPETFALRVIGPNPFSTTAILELDLPEATQVQLIIFDVLGREIVRPIDQFYEAGRHRIRVWGENWPPGMYLYRLEAGNWVHTGTLVRR
>NZ_AP019796.1|WP_161540036.1|99974_100973_-|voltage-dependent-potassium-channel-subunit-beta
MEYRHLGRSGLKVSALSFGAWVTFGDQIDEGLAEECMHAAYEAGVNFFDNAEAYAGGKAEIMMGNILKRSGWKRSDLVISTKIFWGGKGPNDVGLSRKHIIEGTKAALERLQLDYVDLIFCHRPDPETPIEETVWAMNYVLDQGWAFYWGTSEWSAEQIRYAYEFARREHLIPPTMEQPQYNMFHRVRVEREYAPLYRDYGLGLTTWSPLASGILTGKYNEGIPEGSRMSLPGYEWLRKRLESEEGRRQIEKVRRLMPIAEELGCTMAQLAIAWCLKNPNVSTVITGASRPEQVHQNMQALEVARRLTPEVMERIEAILENRPEPEINWRER
>NZ_AP019796.1|WP_161552805.1|101038_101977_-|3-methyladenine-DNA-glycosylase
MQPTQPPMAEIPIHTVLTEAEARARAAAHEARLRPVLDPYLAARRRGAKQPVMDFLFEYYTFRPSRLLRWRPGLGVAVQGAEARRWLEDPDFVETPKGVTVDPGRFPAHRIPSLRWVVTLLERTAARRPHLGCCGMHEWAMVYRTERPRHAHVPLRMDPDALAAFVESHPITCTHFDAFRFFTEAARPLNRFQPTRDTIHELEQPGCLHANMDLYRWAYKFYPWVGSDLIADAFLLACRIRTLDMQASPYDLRAYGLEPIPIETPEGRRRYRALQEQFYREAQPIRRRLLQTLRTLLELAVTNAPTTADGVA
>NZ_AP019796.1|WP_161552221.1|102078_102261_+|hypothetical-protein
MKRVLRALLLSALATGAFAWVLSRLHPRPKPAAVRPGEVDADKLSPEAQERLLEELDRLL
>NZ_AP019796.1|WP_161552222.1|102376_105142_+|insulinase-family-protein
MNLLRRLSAGLLLLLCTMPAFAQTEEATDLPVEIPYEKFVLDNGLTLIVSPDHKAPIVAVNIWYHVGSKNEKPGRTGFAHLFEHLMFNGSEHFNDDWFQALERVGATDLNGTTNRDRTNYFQTVPVNALDLVLWLESDRMGHLLGAIDQAKLDEQRGVVQNEKRQGENQPYGKVWNIIAEHTYPEGHPYSWPVIGYMEDLDAATLEDVHEWFKTYYGPNNATIVIAGDIDPQTALEKVKKYFGSIPPGPPLAKPKAWVAKRTGEQRMTMEDRVPQARLYKVWNVPEWGHPERDYLDLAADVLASGKTSRLYRRLVYTDQIATDVNAFVYTGEIGSQFMIIATARPGVPLEKVEQAVDEELARFLQEGPTADELERVKADFIAGFIRGVERIGGFGGKSDILAQYEVYGGDPGLYKVTLRRMQQATPAQVLEAARKWLSDGVFVLEVHPYPKLQASGEDVDRSQLPPVGTPPEVSFPEVQQATLSNGLKVLLVERHAVPVVNFQLILDAGYAADQFARPGTATLAMNMLDEGTTSRTALEISDELDRLGARLSTGSDLDVSTVYFSALRDKLDPSLELFADVVLHPAFPEADFQRLKQQQLVAIQREQVSPVQMALRVFPRLLYGENHAYGLPLTGSGTPESVQQITRDDLVRFHQTWFKPNHATLVVVGDITMDELLPKLERLLAEWNPGDVPQKNIQDVPQKDRSVVYLIDRPGSEQSIIFAGHVAPPEANPRELAIKAMNTVLGGAFTSRINMNLREDKHWSYGARSMLMSARGPRPFIVYAPVQTDKTAPAMLEIKKELDGIVNGQKPVTPEELDKVQRNLTLRLPGRWETANAILDDLSYVVQFGWPLDYWRTYPDAVRALTLEDVNAAAREVLHPDRLVWVVVGDRSRIEDEIRQLELGPVYLIDTEGNLLASLSE
>NZ_AP019796.1|WP_012842611.1|105242_106028_+|PspA/IM30-family-protein
MSLWARFKRWIRSIFGGAISALEDPRLILEQNIRELNDQIPKMNENIATVKANVLLLQKEVRRNEQEIERLVARIKAAIQAGRDDIAQQYAIQLQKAKETLARTKEQLQYAEAAYEKALQVKQAFLREKERKIQEAKEALRAHERAKWQAKVADALEQFEVGGLDQTHEEMVQRLREETARSEARLELALDSVDADALKIEADAEALRAAELVRQFKLEMGLLEPEQKPALESPAREAEQEAPEQARETEETKTIGRQRTR

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Crispr_ID: NZ_AP019796_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_2

358280-358380

Orphan

Consensus_repeat	Method
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019796_2

>merge|NZ_AP019796|2|358280-358380|CRISPRCasFinder
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGATTCGAAGTGCGGTAGGACTTGATATTATCAGATGCAGCGGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT

>NZ_AP019796|2|2|358280-358380|CRISPRCasFinder
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT	TCGAAGTGCGGTAGGACTTGATATTATCAGATGCAGC
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161540214.1\|350399_351116_-\|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl\|CDD\|284031
NZ_AP019796.1\|WP_014066018.1\|351685_352192_+\|preQ(1)-synthase	unknown	unknown	gnl\|CDD\|237320
NZ_AP019796.1\|WP_161552269.1\|366515_367922_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227850
NZ_AP019796.1\|WP_161540211.1\|344785_348439_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276808
NZ_AP019796.1\|WP_161552275.1\|380510_381575_+\|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552268.1\|364071_366474_+\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|224423
NZ_AP019796.1\|WP_161552273.1\|375977_377594_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540217.1\|354003_355380_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|237354
NZ_AP019796.1\|WP_161540218.1\|355417_357133_-\|dihydroxy-acid-dehydratase	unknown	unknown	gnl\|CDD\|234861
NZ_AP019796.1\|WP_161552270.1\|368064_371208_-\|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|379297
NZ_AP019796.1\|WP_161552274.1\|377590_380506_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|372685
NZ_AP019796.1\|WP_161552271.1\|371504_373679_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540213.1\|349695_350397_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|275301
NZ_AP019796.1\|WP_161540221.1\|363171_364008_-\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_AP019796.1\|WP_161540215.1\|351075_351546_-\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_AP019796.1\|WP_161540219.1\|357222_357876_+\|DUF2459-domain-containing-protein	unknown	unknown	gnl\|CDD\|378218
NZ_AP019796.1\|WP_161540216.1\|352188_353946_-\|dynamin-family-protein	unknown	unknown	gnl\|CDD\|206739
NZ_AP019796.1\|WP_161540212.1\|348474_349368_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552272.1\|373708_375907_+\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_AP019796.1\|WP_161540220.1\|359195_360194_+\|transposase	unknown	unknown	gnl\|CDD\|379252

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161540214.1\|350399_351116_-\|7-cyano-7-deazaguanine-synthase-QueC	gnl\|CDD\|284031	pfam06508, QueC, Queuosine biosynthesis protein QueC. This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.	2.13531e-87
NZ_AP019796.1\|WP_014066018.1\|351685_352192_+\|preQ(1)-synthase	gnl\|CDD\|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	1.35997e-39
NZ_AP019796.1\|WP_161552269.1\|366515_367922_-\|hypothetical-protein	gnl\|CDD\|227850	COG5563, COG5563, Predicted integral membrane proteins containing uncharacterized repeats [Function unknown].	8.89812e-22
NZ_AP019796.1\|WP_161540211.1\|344785_348439_-\|hypothetical-protein	gnl\|CDD\|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	7.90199e-06
NZ_AP019796.1\|WP_161552268.1\|364071_366474_+\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	7.67705e-63
NZ_AP019796.1\|WP_161552274.1\|377590_380506_+\|TonB-dependent-receptor	gnl\|CDD\|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	1.02753e-24
NZ_AP019796.1\|WP_161540217.1\|354003_355380_-\|AAA-family-ATPase	gnl\|CDD\|237354	PRK13341, PRK13341, AAA family ATPase.	0
NZ_AP019796.1\|WP_161540218.1\|355417_357133_-\|dihydroxy-acid-dehydratase	gnl\|CDD\|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_AP019796.1\|WP_161552270.1\|368064_371208_-\|carboxypeptidase-regulatory-like-domain-containing-protein	gnl\|CDD\|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	4.50937e-23
NZ_AP019796.1\|WP_161540213.1\|349695_350397_-\|radical-SAM-protein	gnl\|CDD\|275301	TIGR04508, queE_Cx14CxxC, 7-carboxy-7-deazaguanine synthase, Cx14CxxC type. In the pathway of 7-cyano-7-deazaquanine (preQ0) biosynthesis, the radical SAM enzyme QueE is quite variable. This model describes a variant form in which the three-Cys motif that binds the signature 4Fe-4S cluster takes the form Cx14CxxC, as in Burkholderia multivorans ATCC 17616. The crystal structure is known.	4.33657e-66
NZ_AP019796.1\|WP_161540221.1\|363171_364008_-\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	8.25566e-10
NZ_AP019796.1\|WP_161540215.1\|351075_351546_-\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	1.18678e-31
NZ_AP019796.1\|WP_161540219.1\|357222_357876_+\|DUF2459-domain-containing-protein	gnl\|CDD\|378218	pfam09601, DUF2459, Protein of unknown function (DUF2459). This conserved hypothetical protein of unknown function is found in several Proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.	2.37984e-54
NZ_AP019796.1\|WP_161540216.1\|352188_353946_-\|dynamin-family-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	2.91749e-69
NZ_AP019796.1\|WP_161552272.1\|373708_375907_+\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	9.56554e-09
NZ_AP019796.1\|WP_161540220.1\|359195_360194_+\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.49017e-12

>NZ_AP019796.1|WP_161540219.1|357222_357876_+|DUF2459-domain-containing-protein
MNRKRFFLLGLTLLLVGLAVAQERRFRIYLIHHGWHAGIAFCQADLEGTDWPAEAFFPERRFVEVGWGEAGYYPDPDPGAGDALRAALWPTDAVLHVAAFDHPPALIFKGPVRQIDLDSTAFRRLVAYVADYFKRDAQGRLKPVAPGLYGMESQFYAAEGRYHLFNNCNHWVARALRAAGLSVHPARALTLGDLWRQLEPLSQAASPEAAGCLSNIR
>NZ_AP019796.1|WP_161540218.1|355417_357133_-|dihydroxy-acid-dehydratase
MPPLNRYSRRITQPKSQGASQAMLLATGLKEEDLDKPQIGIASVWYEGNPCNMHLLDLAAEVKAGVQEAGMVGFRFNTIGVSDGISMGTEGMSYSLPSRDLIADSIETVMAAQWYDGLIALPGCDKNMPGCVIAMGRLNRPSLMIYGGTIRPGCLNGQKLDVVSAFQSYGEYLAGKITDEQRRAIIRHACPGPGACGGMYTANTMAAAIEAMGLSLPFSSSLPAEDPRKREECRRAGHVMRQLLERDLKPRDIVTRASLENAIAVVMALGGSTNAVLHLLAIAHAFDLPLSLDDFQRIARRVPLLADMKPSGRYVMEDLCRIGGVPAVMKLLLEHGVLHGDALTVTGKTLAENLADVPDLPEDQDIIRPWDNPIKSSAHIYILYGNLAPGGCVAKITGKEGLRFSGPARVFDSEEDMLAGLEAGRIQRGDVIVIRYEGPKGGPGMPEMLTPTSALMGAGLGKDVALITDGRFSGGSHGFIIGHVVPEAQEGGPIALVRDGDIITIDAEAGLIHMDVSDEELARRRAAWTPPPLKVTRGALFRYVQTVQDASRGCITDAPIGEPQPAGSPTT
>NZ_AP019796.1|WP_161540217.1|354003_355380_-|AAA-family-ATPase
MADLFQQAAERLLAAQAPLAERMRPRTLDEFVGQEHILGPGKLLRRAIEADRLSSLIFYGPPGTGKTTLARIIARTTRAHFTALNAVLAGVKDIRDAIEAAQERLRLHQQRTILFIDEVHRFNKAQQDALLPHVENGTVIFIGATTENPYFEVIKPLVSRSRVFELKPLTPEHLRRIAEQALTDPERGYGRLNVVIDPEALDHLIDVANGDARSLLNALELAVETTPPDASGRIHITLPVAEESIQRRAVLYDKEGDAHFDTISAFIKSLRGSDPDAALYWLARMIYAGEDPRFILRRMLIFAAEDVGLADPRALQVAAAAAQAFDYVGMPEGQFILAECCLYLATAPKSNATMAYFNALAYVEREQSGEVPTHLKDASRDRQGLGHGQGYKYPHAYREHYVPQQYLPEHMQGTYFYEPSDQGYERVIAERLAAWRQRDLAEGLQKRLQRYLPDDADR
>NZ_AP019796.1|WP_161540216.1|352188_353946_-|dynamin-family-protein
MEALLTAEHEALLEAERNLLARLHGVLARTGADESLRERLSEVIEALDALFVVVVVGEFNAGKSTVLNALFGEKLLEEGPIPTTAKITLLRYGETPMERPRSEYLVERYHPSERLRHLVLVDTPGTNSIIRRHQELTEHFIPRADLVLFVTSFDRPLAESERQFLSYIRDTWGKRLVFVLNKADLARSEADLEQVLAHIRTGCRELMGFEPEIFPISAARAFEARTSDDPEQRARLWESSGFEDFERLLLDRLAGPERLRIKLTAPLDVAEKLIERLQAHLAERRQLLEQDRTNLERLEARLEEVRTELIATVRPYLSEIDNQLLQVERRGLQFLQDTIRIGRLGLLRDRDRFKEEFARQVVRDLDHRLETTLAEAVDRLLQQGLQLWNQTLSEFTERVEQVVRRRTPQVRADLLYDRRQLFDAVVRQATRQLETYDLREEARRILENTRDAVALFLGTEALAGLGALVTMVITAAGLDVTGGFVAAGALAVVGLVVLPIQKRRALREFRDRIEQLRTELLAALEQQLEREVDGLLERLAATLAPYREFVHHEQHLVEETGEALQALERETRRLRAAIEKAVPVG
>NZ_AP019796.1|WP_014066018.1|351685_352192_+|preQ(1)-synthase
MTEQERQALAEKLAALREEALAHTEQALAYMARFGVRPEGRIQPFLPPEARQQHIDRLPYEHAVRQVVVYETEPGEFSAVCPFSGLPDYGVLRIEYVPGSWILELKSLKYYIVSWRNIGAAQEDLTAIIYQDLMRHLEDPEYLRVTTVYNVRGGIRTTCTIDSREQGR
>NZ_AP019796.1|WP_161540215.1|351075_351546_-|6-carboxytetrahydropterin-synthase
MKVAKRFRFEAAHRLPWHPGACRHLHGHSYRLVVGLEGDPDARGILVDFQDLKRLVQPLIDTWDHATLVASDDTALQEALDALGSRYVVLPFDSTAENLCTYVADYLIREAGDWLRARGVRRLWVRLAETETSFAETECALIRDVRPEPAAHAEAR
>NZ_AP019796.1|WP_161540214.1|350399_351116_-|7-cyano-7-deazaguanine-synthase-QueC
MSAPNLLPTLKPAEHGETALVLLSGGQDSTTCLYWALHYFPKVEAIGFHYGQKHAVELEQARKIAEQAGVPFTVLDLRGLLRGSALTEHDQDVSAAHPLAPHLPASFVPGRNALFLTLAASYGFTRGIHDLVGGMCQTDYSGYPDCRRPFIDAMERALSLALDTTIRIHTPLMHLTKAETWRLARELGILDVIIELTHTDYNGDRSERHAWGYGRLDNPASILRARGYEEAKARGWLD
>NZ_AP019796.1|WP_161540213.1|349695_350397_-|radical-SAM-protein
MRSYRIKAIWKTLQGEGFFAGRPAVFVRFVGCNLWSGYEQDRERDARRTGADCPRWCDTDFRKEGSRAYTADELVAAMQEVGGPIRFCVLTGGEPLLQLDAALMRALKAAGYFVAIETNGTISLRQACTDPETGQVVAPDWIVCSPKLPEDRLTLEYFDELKLVMPDYRPEQYARFARRARPHRAGGRRVPLLWLQPEDGPRLAEARRCAVELALAHPDWRVSVQTHKILGVP
>NZ_AP019796.1|WP_161540212.1|348474_349368_-|hypothetical-protein
MPSRWLCAIGLLGALALGPPSSHAQSLLQVVPDTLLLHDEAGCMWIGEEEACYKGRAALINRGTEPVRIDSLGMLCDDPEGIWYIYYGWGNYWVTLFKAPDYKIEGFLYGPDDCFAKCTYEDENGISQPVPGCVAFHSITLELEVQDTLWFLIRGVDMCPMCKRSGAGNVQADAIDIPDVFAFYQQVPFPDTVWLAVSWDSLSPSAVEPVEAEGLELQAYPQPFRERVHLALSARRAGLYEVVIWDVLGREQARWRYQMVPGARREWSWRAGASGVYLVGIFRDGRLLAFRTLISMR
>NZ_AP019796.1|WP_161540211.1|344785_348439_-|hypothetical-protein
MHAGKRLVFLVLLVCSLGITETLAQSGLPELSCASGSGEAVTQGVQLTGTQPSYTAARHFPVTGQVNVLFILARFRDDNYEHCAEITGYDATGYPIFEERNYQAFCANRNGDSFEVGGFQSWTDDPATEWPVATGDPSRDRQVYNAHEHELPEWAKGTRLIDPPGVTSITPGSLTDFYHRMSGGQLDVRGYVWPRVYVTEYGQDHYKADSIDSQARFFVNGAAAASYEIITYVRDHPHGIPLANSSLWDRYTNGQGDNLTPDGKFDMIVILWRFSKFDFSSRPEERDKSSITSLGSTSSSGDGFARVNNGQGLWIHDLQVIDNTTAGSGIIGAAHTHKGAIAITVHELGHRHFGLYHTIDGQSSAYQSAFSVMGGSYSVMGPGDRLKLGWVEAVMINLEDIRNQHGGRLSYELIDGTLSNQVLYLYDGSPQCGDVVVEARTWSNYWDRPPDGFNADGDWEDTYLPEGLYIEKAPSPSGSGCGYDFNGNPRFSSMENTGLAFDHRRVDKSFRWGSRSPIASVAFGPGDAYTPFSRYLRDFHRNSTLDGRLALTDITRSGNGFQFTIWGDFPAASQTRRLTTNYGFDGQTVARNTTGVWSLQGALVLQGTGAPPPIPAGTTFRLGSNAQLVVERPVEVVGTATHPVRFERLDPSQPWKELTLRADSNRFEYVVFDGGTKTVEILSRENMFRFCRFRNGWRGLSSNFYQYPANQGRSSFRLEQSIVENNQTVGVVAYHADVTLQQVTVRGNGQAGLWLYDGYGTVGSSVIEQNGTGASYRSGIEVHYNSYVQFYYTSSFVPAVNRVARNAHHEVYLASSADGAWLGYCSSGPMGSFHLGDYNAIFDDGPQAGDERLIYNGTSTNVVARCNYWAGAGADKFYGTVDRAYPLSYDPTGSSGAYEGGVPARVASDAPPEVATAGLNASVAASPGMSVSAAVAEEDAAQALRAQMRALRARLLAAPEAPEADRWLRELYALEQADRWDRLGERAANRQVRTWLAGRLLAGERLSATGRRAGEVALLLELRALLAAGQYAEAAARLKFYDRWIREPAHRQELRWARLVLLEQAGRLAEAQAELAALQAEASEAERATWSVLTEALGAKAAAEEATAKRLEAAPEVTAAEVAAKPEALTLSVYPHPVRDRGTLVLGLPEAARVRVVVYDVLGREVGVLLEGWQSAGWHRVVLDGRHWRSGWYMVRAEVVWPDGRVEARTQPLLRVR
>NZ_AP019796.1|WP_161540220.1|359195_360194_+|transposase
MNASKVDELDYIHFLVAAQRVFTTTEAARIRAGELNAPAHDAYTRLLKRIPPDTEALWQEVAPFVRPDRGVLVVDDTTLDKPHARKMAWVTRHWSGKHKRVVQGINLISLLWTEGQARLPCDFRLYNRAEDGLTKNDHFRALLQTAHARGFQPRLVVFDSWYASLANLKYVRQLGWEWFTRLKANRLVSVEGERRNRPVSSWPIPAEGCVMHLKGYGWVKVFKTVTPDGREEYRASSRLDMTLEETAAYGRHAWQIEVYHQGLKQFTGIERGQFRVAEAQRNHIGLAIRAFLRLEVARLQRGISWFEAKQAILREAIRHYLASPSLILHSTA
>NZ_AP019796.1|WP_161540221.1|363171_364008_-|DUF2726-domain-containing-protein
MATSSTPADVETLYRHVQAQAWTPALELVYRHRTLLAVDPLWRHAADVLVRELHPRLAEVGEAVLERLFLLHTGRLYALPETVFADLVAELVRRHADRPELARRYARWCPTHPECARLLATPTTETPWEELNGFAVRRHQPIQQVRSPSLFRSQQEFVFFQAVREVFPTYLVYPNVALSCLIDYERLADVLSEAERRYALQALVDCAVFDPDDGYRPRYCFELDSPLHGAPERRQRDALKARILQQAGLPLFCIRPPTGTVDRDAFVALLRRLFQQNL
>NZ_AP019796.1|WP_161552268.1|364071_366474_+|prolyl-oligopeptidase-family-serine-peptidase
MKRLTAGWILLLMLGGVAWAQPQLTVEKIMQDPKTWIGDWPDNPFWSEDGQYLYFWWNPKGQFPSDSLYRVSRSGGAPEKVAPEERRNLPPAFDGWHHGEWVYDADFRRKVFARDGDLYLYDRTTRRLTRLTRTAERESNPRFTPDGQAVVFVKENNLFQLDLRTGALTQLTDLRRGQEPRERRPDAQDAFLEAQQRALFEVIRKRVEMREAREKAQERDRKAENPPPTFYYGDKNVEQLQLDPTGRFVTFALTTDEPREKATAVMDYVTESGYARELQARPKVGVPPGSFELYVQDLMRDTTYRVNLHQVPGAYDVPEYLREQGVEPDSQKTKRFLYAYGPYWSGDGRYAVLEVRARDNKDRWIVRLDPETGRLTVLDRQHDEAWIAGPGISWFGGRSTMGWLPDNRHFYFQSERTGYSHLYVVDVETGRIRQLTDGEFEVFDPFVSRDGRYWYFTSSEGSPFERHFYRMPIEGGPRERLTTLIGRNDVVLSPDEQVMGILYSYSNRPPEIYLQPLRRGRPGEPQRITHSPTEEWLAYPWRDPEIRFIPASDGAQVPARVYEPDSLNGAAVFFVHGAGYLQNVHRWWSSYFREYMFHNLLADRGYLVLDLDYRGSAGYGRDWRTAIYRHMGGRDLQDYVDAARYVQERYGIPPERVFIYGGSYGGFLTLMALFTEGEHFGGGAALRAVTDWAHYNHPYTSNILNTPETDSIAYVRSSPIYHAEGLEDPLLMCHGLVDTNVQPQDIFRLVQRLIELGKENWELAVYPVEGHGFQEPSSWTDEYRRILKLIEATVGPDRRR
>NZ_AP019796.1|WP_161552269.1|366515_367922_-|hypothetical-protein
MSARFLTSIWHVCVLVLAGTIGLASFASAQTLTWLGAPEAWENSTAEGVSSDGQTVVGYFTPAGTYLSQAFRWTSRFGSFLLDPRYEWSTATAVSGDGNTVVGRAYLNNDATNRNFPFVWFAFSIDLNGDGYNDLIRLNPPDTDDGIATDLSEDGQIIVGYYEDENGNNQAFWRTDQGFIVLGTLGGSTSAALAISPDGSVVVGSSENSFGNTHAFRWTSNEGIQPLSTLFYLSYTHMVALDVSSQGKYIVGWADRPTSERVAYLYKTINGVSTVELLGSLGGLSTAATAVSDNGVVVGYGENALGQVRAFRWTEQTGIQDLNALYGHLLDSGSYFLSALDISKNGEFIVGRAYHAANDKTEAFLLHAPITTATETALLPEAPALLTPAPNPFAAATTIRYDLPAPTTVRLEVVDLYGRTVAVLVDGPRPAGNHYLYYQPNHLAGGLYFLQLTVGARRFHQQMVYLGK
>NZ_AP019796.1|WP_161552270.1|368064_371208_-|carboxypeptidase-regulatory-like-domain-containing-protein
MRRISLMLLCLLGLPLAGYAQGVTTAALTGTVTDERGDPLPGANVVAVHEPTGTQYGTTTQIDGRYALLNLLPGGPYTVTVSFVGYQTRRETDLMLPLGQTRVLDFTLAEATVELQALEVVGVRSSVLNSDRTGARTNIDEATIERVPTITRSLADFTRLTPQATGGFSLAGRNNRYNNIQIDGATLNDVFGLSGTGMPGGQADAQPISLDAIQEFNIDIAPFDVRYNGFTGGSINAVTKSGTNRLSGSVRYLGRNQNFVGDLKTPDGETVPFGDFSEYTLVGNLGGPIQPNRAFFFVNAEYQRRKTPLDVGVQGSRAATIFPVALDSLNRIIEIARTRYGYDPGGFDPLSNGTDNFKLLAKIDWNLAPNHRLTLRHNYVNADKDEGISRGTFSFDLSNRRWIFESVQNSTVLELKSTFGTNLFNEARLVYTRIRDKRTVKAQPFPQVSILVNNRYTVNLGIDRFSQANALDQDLWEFTDNLTYFRGKHTITVGTSNQIYRFSNLFIQDYYGAYEFNSIADFEAGRPSRYFFSYSLLDDPKPRAEFTAYQLGFYVQDQYQATPHLSVTVGLRVDVPLYPDKPLYNPAVPEAFPGYSTATTASGNLLWSPRLGFNWDLSKGARTTQLRGGTGIFSGRTPFVWISNQYSNTGVDFGRVDARNLPEGCFVPEPDPAAQPRPGTALGTTCGLAPITTTEVNLIDEDFKFPQVWRTDLALDQQLPYGLIGTIEFLYSKTINDVVFENLNIVRTGTAQGGRVLYGTPSFNGSTARKDPRFTNAILLKNTDKGYSTSLTVGVQREAQAEGLSGALFYTWNRAENVNNATSSRAISNWQYNEARDVNNPELGTADFEVRHRILAHLSYRVRYQQRFATTVTLIYEGRSGSPFTWIYNGNANADTRRDNDPIYVPASPDEIVFTSDSPGGWDELNAFIESEPSLRKYRGQIVPRNSARAPWRNLLDLQVLQEVQTLGTQRLEITATLLNVLNLLNSDWGKVRYTLFDTVRLMDFLGYDDQGRAIVRFTPVQDRDDLFITDDLASRWQLQLGVRYVF
>NZ_AP019796.1|WP_161552271.1|371504_373679_+|hypothetical-protein
MWLGWWSAGALAQGFEEAVVNIGNVGLTITNAGFVGKANVRNNPAGPPSFEYPLDSGVEHLFEAGLWIGAIRSDGLITVRTGAVTAAGGYRPGASGYELAPLEPIIERSTLPTSPVFTRAAVSHQDFVTAYTDTARFLPGTLIPMPDPAGQLGAKIIQTSYAWNFPFTESFVIINFDIINISDQPWDSVYVGLYHDLVVRNVNTTQDQGSAFFNKNGVGFIDSLQATYAFNAGGTEESINTYGAIAFLGAEWRDPRTGQYRFFHPNVADEYIRDGYTPPIVNPRWWLFSGGTDERSRPGDDRTRYQRMGTPYPNPADYPGCRGVQDLACQDSSYVQAVRAWREELRTAGQRSQGNWIGLTPVGPFRRVLPGDTLRVTFAFVGALKPEAYQGLAGRPIDNAESRSLLRTNLFWARRTYAGEDLNYNGRLDPGEDVNGNGRLDRYLIPEPPPPPRVRVEFTTDSDPQTGRTRTGVVLYWDRSAEAAVDPVTGRRDFEGYRIYRTNPGDDRFGNLLDRAVLIAQYDKPGNRTGFNNGFEEIRLSEPVTFPDDTTQYWYRFEMPDLKAGWQYLFIVTAFDEGDPDTGLEPLESSRTAGAVRVFPGTTPTHRGPVGVYPNPYRAGAAWDGGGSRTRKLYFYNLPPRCEIRIYTLAGEIVKTLYHDAATYTGDIRWFSDFSGPGRRFSGGEHAWDLLSENGLDLASGLYLFTVKDLETGEVQRGKFVIIK
>NZ_AP019796.1|WP_161552272.1|373708_375907_+|T9SS-type-A-sorting-domain-containing-protein
MRRTATLMLLLLGIGLVLPARAQIKDVTVREINQIHPDSLALLKQLGTSLTTDRIESLIQSPLTGDTVRFTAVVMSDPLNSGLANTNQDGVPSRLHVFVRDTSAVSQGKDGMTIQIVDGAYETTGLKNLTKGDVATFTAVVTFFGNTIQLTPINIEPLGNYASLGLPDSLLDPVVVTTADLNMNVDVGKVQVNWDNFARLNNQYVRIENATMLRSTLADQGRPNWLFSSDGGETFVQADDISLRFRNDRAGYPDEYNKRDSRDPFRPPPPGALINVQGFVVFRGYFEAFDLGAIPPGAMLRLAPFEDTDLEVLEAPPTISDVGRPDFVPGNEPVTITFDVAADPNRQLTSVELHYYTSSQPDTQVVQASPAASKAGARGTLALYEAQIPAAPDGDFVTYWVEAEDNTGARTRSDDQYYRVLYGGITQIAHVQETPNGGPGDSPFAGVTTDMDLHVVVQSQPSVSGLVAVQDDANLGPWSGILLNLPSAARDTIQRGDRLHITRAYIQENQGVTELDSLTFTKEGTGDFLGYKTMATNDLVDPSIAEAHEGMLVRFENVTIINPDEGFGEWSFSSDGTEENKVKADDRSSAISSDFAVNTFQTGDLVEFIQGIWWYSFGEYKLVPEDPATDIGPITTDVEPGENLPAAFTLAPNYPNPFAEVTTLRYALPQAGPVRLEVFDLLGRRVAVVVDGVQPAGVHEVKLDGRGLSNGLYVVRLTTEAGTATRMIVRMK
>NZ_AP019796.1|WP_161552273.1|375977_377594_+|hypothetical-protein
MTYSLRALPGLIALIVLLGGCDAGFTGEPLPNQPPETYLSVRDSSLVDNLSDEERLVSTVYVSWTGDDPDGYVAAYEFRYYDATTGPADVFWTRTIRNDSLVLLPIPPGSATANVVFEVRAIDNEGLADPTPARTVFPIRNSPPEIRLVSFELPPDTTFPIFSFSWQAEDPDGAVNLARIEVSFNDSTQFVALPPDVDFVTFVANFDRDDPTQTEVTAHVYTGRAFRSTTIEVPGLRLDAENTFYVRAVDQADTSSALARHTWFVKKPRSRVLLVNDYRKATGSVVMAYHRAILRDFLPPGIPIDEWDISRPYVTGSAGNTPRSDALPPVPDPTLRQTLALWDYIYWVSTATVNSVVGNNLPYAAAVMDLFFERGGRILVHSPVTQPRDPEANLGNPAILMLPLSDLLVLPDSVRRLELPSGAAITPVSAPPGVAEALPPLQSNRFFINELPYFAEGATIIPLYEADYRYLSRSGRRGTWPYPRTVASISADARVALFGLPLVNELSGEPELVGADGDPEAGRRAVMLLLRSLGFPER
>NZ_AP019796.1|WP_161552274.1|377590_380506_+|TonB-dependent-receptor
MNRRTAGRNAILWLLLTLVGALPARGQGSIAGTVRDERGEPLPGVNVVVVGTSYGAATDLDGRFRIDGLRPGEYSVRVSYVGFETVLFTGVRVRDGETTTLDVTLREQVVVGEEVVVVGERPLVDVEQSSSAYVVSREQIEAAPLRSVQEVVGQQAGVLRDPTGLYIRGGRAYETGFYVDGVSARDPLAGTGFGLDLGTNAFQEVEVITGGLDARYGDVTSGVVSIQTREGGERLSGSFTHKRDNFGSLNESWGSNFHEDLYEFTLGGPLGTDRLRFFVAGQVQLSDGFTRHVSDPDSVRSSLVTWDFLLPRTGNRWNGFLKLTYTPWPGLKLQAAYQRSLTVNQNTRMLQVTGNEAVVAPGFQYAFILQPENANTFAHDNVLAYVKASHVINERSFYEIQISRLFTRLRADANGRRWRPRAVTTELDPRSIVTYPATIFVDESGQPFDPNALFVLPGPGLYNNGGIATRFHDHFAEEWTLLGTYTLFSTDRNRRLNAGLELKFNDYQWIDIIRPWVGAPIGSEEAEATGRLGESADIWRVKPRRGALFTTGQVRYRGLILNAGLRLEWWSPGRYVDRLVDDPRTPILETVRQAYKDDTVPFFGLRTKFFLLPRLRVSFPIRENQVLFFNYGRSTRLPHPTFVYAGLDPFYQDRSFFADLGNPNLNPEVDISYELGLRYQVTSNDVLSVTAFWRDKFDFITIENVIIRDPTGRETVRAFRINGDFARVRGVEVSYLKRIGDWFLGQMAGSFSRATGLSSTNNDALVQFLARGDIENTFETPLAWDRPIDLKASVTLTYDRPRPLLGLPGLNRLQLFLSTTFRSGQRYTPAEFKGYQTNPFTGEANWRPIYEIVSDPAARYSRIGEPWWWFDLALRRRIQLAGNDLELSVEITNLFNQKNSVIVNPVTGKAYPDVDPEKTDFTKLRGNRDFDVPINVRDPRYEDPTTTGLPPFNPARFLPPRHVMFGISYAF
>NZ_AP019796.1|WP_161552275.1|380510_381575_+|PorV/PorQ-family-protein
MTRTCLLLALLLGLIGEVRAQLLPSYGRDRAGTSGFQFLKIPVDARSAALGETVVAQAFDASALFWNPALAAQVENVQVGVGHTAYFVDIRLDYLSLIYPLGWAGLTLGLSLETLDSGEMPVTTEFEPYGTGEMFSFRDLALGLSVAQPLTDLFSYGITARYVRESVAELVTQTLLFDLGIFYRVGDTGVQMAVAIRHFGFDGRPEGKLVRTVIEKVGPAKRAADPEPIATTPDPSVRIETEFETITPPTTFLMGVSYTLLRDNPQHRLTLLGQLTNPNDNAETFNVGAEYTWNHTLMVRMGYRFGVEEFRTPALGVGLQLPELVAGVQARFDYGFQHLERLGTVHRVGLNLEL

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Crispr_ID: NZ_AP019796_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_3

567791-568673

TypeI-E

Consensus_repeat	Method
GGTGTCCCCGCACCCGCGGGGATAGTCC	PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCC	CRT

14 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh

The CRISPR arrays of NZ_AP019796_3

>merge|NZ_AP019796|3|567791-568673|PILER-CR,CRISPRCasFinder,CRT
GGTGTCCCCGCACCCGCGGGGATAGTCCTTAACAGAAAGGGTGTGGGTTTATAACCGCGGGGGTGTCCCCGCACCCGCGGGGATAGTCCTCTTATCCGCATGGGAAAGGATCTTGCTCTGAGGGTGTCCCCGCACCCGCGGGGATAGTCCCTTCATTTCTTCCCGGCTTAGCGGATCGACAGGGGTGTCCCCGCACCCGCGGGGATAGTCCCGATCTCGCGCCCGGTAAGCTTGGGCGCGAGATGGTGTCCCCGCACCCGCGGGGATAGTCCCCCCTCGCCGGCCGCCATCGTGATTCTCGTTACGGTGTCCCCGCACCCGCGGGGATAGTCCCCGGGCGATTTCGGATTTTTTCGCTTTGTACATGGTGTCCCCGCACCCGCGGGGATAGTCCCTGCTGGAGGTCTGATGCTGAGCGGCTACCGTCGGTGCCCCCGCACACGCGGGGATAGTCCTCTGCACCAGGTCGCGCATTTCATCGTCGATGCGGTGCCCCCGCACACGCGGGGATAGTCCCACGAAGTCATCAGGCACCACCGGCACCCGGTTGGTGTCCCCGCACCCGCGGGGATAGTCCTCTTCCGGAAGGTTGAACAGCAGAACGCGCGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGCGGTGTCCCCGCACCCGCGGGGATAGTCCCGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAGGGTGTCCCCGCACCCGCGGGGATAGTCCTTCTATCGAGTCGGGATCGATGATGCCCCGCCAGGTGTCCCCGCACCCGCGGGGATAGTCCCCAAACCAACAGAGCCATGAGATCGTCTCTCACGGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019796|3|1|567791-568672|PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTAACAGAAAGGGTGTGGGTTTATAACCGCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTATCCGCATGGGAAAGGATCTTGCTCTGAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCATTTCTTCCCGGCTTAGCGGATCGACAGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGATCTCGCGCCCGGTAAGCTTGGGCGCGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCCCTCGCCGGCCGCCATCGTGATTCTCGTTAC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGGGCGATTTCGGATTTTTTCGCTTTGTACAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCC	TCTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCC	CACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAACCAACAGAGCCATGAGATCGTCTCTCAC
GGTGTCCCCGCACCCGCGGGGATAGTCC

>NZ_AP019796|3|3|567791-568673|CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TAACAGAAAGGGTGTGGGTTTATAACCGCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CTTATCCGCATGGGAAAGGATCTTGCTCTGAG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTCATTTCTTCCCGGCTTAGCGGATCGACAGG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GATCTCGCGCCCGGTAAGCTTGGGCGCGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CCCTCGCCGGCCGCCATCGTGATTCTCGTTAC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGGGCGATTTCGGATTTTTTCGCTTTGTACAT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCCT	CTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCCC	ACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CAAACCAACAGAGCCATGAGATCGTCTCTCAC
GGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019796|3|1|567791-568672|CRT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTAACAGAAAGGGTGTGGGTTTATAACCGCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTATCCGCATGGGAAAGGATCTTGCTCTGAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCATTTCTTCCCGGCTTAGCGGATCGACAGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGATCTCGCGCCCGGTAAGCTTGGGCGCGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCCCTCGCCGGCCGCCATCGTGATTCTCGTTAC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGGGCGATTTCGGATTTTTTCGCTTTGTACAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCC	TCTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCC	CACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAACCAACAGAGCCATGAGATCGTCTCTCAC
GGTGTCCCCGCACCCGCGGGGATAGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161540351.1\|561468_563028_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000028_cas8e_CAS-I-E	gnl\|CDD\|274192
NZ_AP019796.1\|WP_161540373.1\|577194_578112_+\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
NZ_AP019796.1\|WP_012842997.1\|563611_564883_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_AP019796.1\|WP_161540353.1\|566445_567339_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|187850
NZ_AP019796.1\|WP_161540368.1\|570076_572626_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552301.1\|572631_573876_-\|galactokinase	unknown	unknown	gnl\|CDD\|223231
NZ_AP019796.1\|WP_161540372.1\|576756_577098_+\|DMT-family-protein	unknown	unknown	gnl\|CDD\|377316
NZ_AP019796.1\|WP_161552302.1\|573889_575419_-\|solute:sodium-symporter-family-transporter	unknown	unknown	gnl\|CDD\|271360
NZ_AP019796.1\|WP_161540376.1\|580236_582000_+\|DUF885-family-protein	unknown	unknown	gnl\|CDD\|377577
NZ_AP019796.1\|WP_161540352.1\|563024_563564_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_AP019796.1\|WP_161540375.1\|579583_580240_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_AP019796.1\|WP_161542349.1\|557619_558123_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_AP019796.1\|WP_012842999.1\|565630_566428_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|215025
NZ_AP019796.1\|WP_161540350.1\|558142_560773_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|182031
NZ_AP019796.1\|WP_161540367.1\|569343_569832_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|225200
NZ_AP019796.1\|WP_161540374.1\|578131_579580_+\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143415
NZ_AP019796.1\|WP_161540354.1\|567310_567739_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_AP019796.1\|WP_161552300.1\|560870_561452_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012842998.1\|564882_565641_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_AP019796.1\|WP_161552303.1\|575441_576497_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|236963

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161540351.1\|561468_563028_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	9.59037e-23
NZ_AP019796.1\|WP_161540376.1\|580236_582000_+\|DUF885-family-protein	gnl\|CDD\|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	0
NZ_AP019796.1\|WP_012842997.1\|563611_564883_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.2408e-121
NZ_AP019796.1\|WP_161540353.1\|566445_567339_+\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.34433e-92
NZ_AP019796.1\|WP_161540373.1\|577194_578112_+\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.53161e-101
NZ_AP019796.1\|WP_161552301.1\|572631_573876_-\|galactokinase	gnl\|CDD\|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	1.14032e-144
NZ_AP019796.1\|WP_161540372.1\|576756_577098_+\|DMT-family-protein	gnl\|CDD\|377316	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486). This family contains several proteins of uncharacterized function. The family is represented in the Transport classification database as 2.A.7.34, though the exact nature of what is transported is not known.	6.46642e-57
NZ_AP019796.1\|WP_161552302.1\|573889_575419_-\|solute:sodium-symporter-family-transporter	gnl\|CDD\|271360	cd10325, SLC5sbd_vSGLT, Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute binding domain. vSGLT transports D-galactose, D-glucose, and alpha-D-fucose, with a sugar specificity in the order of D-galactose >D-fucose >D-glucose. It transports one Na+ ion for each sugar molecule, and appears to function as a monomer. vSGLT has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_AP019796.1\|WP_161540367.1\|569343_569832_-\|DinB-family-protein	gnl\|CDD\|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	1.82093e-11
NZ_AP019796.1\|WP_161540375.1\|579583_580240_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.33813e-31
NZ_AP019796.1\|WP_161542349.1\|557619_558123_+\|3'-5'-exonuclease	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	7.38113e-23
NZ_AP019796.1\|WP_012842999.1\|565630_566428_+\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.06537e-23
NZ_AP019796.1\|WP_161540350.1\|558142_560773_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.40697e-83
NZ_AP019796.1\|WP_161540352.1\|563024_563564_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.09712e-15
NZ_AP019796.1\|WP_161540354.1\|567310_567739_+\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.20221e-28
NZ_AP019796.1\|WP_161540374.1\|578131_579580_+\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143415	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.	0
NZ_AP019796.1\|WP_012842998.1\|564882_565641_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.10642e-36
NZ_AP019796.1\|WP_161552303.1\|575441_576497_-\|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl\|CDD\|236963	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0

>NZ_AP019796.1|WP_161540354.1|567310_567739_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MAMTIAVTRNTPGRFRGFLASCMLEIAPGVYVAPRMPRDVRERVWQVLLSWAELIPPDGGVVLLWRNRKAPSGLDMRLLGWPKKELVEYEGLWLAWRGLTAAHDVEELARLVEAEEPPLEAGDPILRLVERPDLDEEEGSSL
>NZ_AP019796.1|WP_161540353.1|566445_567339_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MVFKGRLGLESARVPQADRHGLLWLERGRLSAEDGTLVFTTAGTDRLAAGTYDIPLQQVSNILLGPGTVVSHDALRLLARQQTGLLAVGSGGVRLYAVSMPFGPDRSERARRHARLWADETRRLEVARAMYAIRLGGALPPYIQDLDTLRGIEGARVKESYRQLARQFGIDWRGRRYDRQHPELNDLVNNAINHAAVAVYAAARIAVAVTGTIPQLGFIHEASGHAFALDIADLFRTTVTVPVAFRAVRQFITEGGRDIESVTRTLAGRTLRDEEVIPRMIDYIKELIDGHDDRRDP
>NZ_AP019796.1|WP_012842999.1|565630_566428_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MKDNASQGRADPTPFHMVQLWLDVRRLYELGRMLDLFRARRPVSLSYLVHCALGELFQAQAPRPFAVEGENRRGPWVRVLGYADVPWETLQELARGFASPAVYAICGWDRGASKPMPTEIPRGMRLAFSVRVCPVVRKASAGQSPRGRRWQKGQELDVFLDAAWSQPEAVLDREAVYAEWLRRQMARPEKGGARVETVRMTRFSIERMTRRTNGSSRSVTVIQRPDVTLEGVLTVTDSAAFMRMLRRGVGRHTSFGYGMLKLRRA
>NZ_AP019796.1|WP_012842998.1|564882_565641_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MEILLLRFDAPLMSFGAPIVDQYGFIQPYPALSMMTGLLANALGYTHAETARLERLQERLRYAVREDRRGQQLRDFQTVDLSQPFLHDERAWTTRGTLETRQGGTASLGIHIRLRDYWADAVYTVALTLDPPDEPPTLADLEQALRFPARPLFIGRKPCLPAAPLFIGRVEAADLLDALRRAPLDARADRADFYRVWWETGPDDPPPVEGIRENLRRPVTDRRDWANQIHVGSRWIAMGELSVHPAGERHEG
>NZ_AP019796.1|WP_012842997.1|563611_564883_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MVSAFVQIHTLTAYPAALLNRDDAGFAKRLPFGGAIRTRVSSQCLKYHWRNFSGEHALYGLDVPRSLRSRETFKRCIARPLVEEGYPLRLVVAFALHLQKLIVSDESLSKTDFKKLMSDEVDDATLLDQLKSNQVIILGRPEVDYLTRRIRERLDALREVWADAAAPLSDEQLERVYQELQAIGKGELKKNLKGLYLAAGLDAALFGRMATSDVLARGDAAIHVAHAFTTHAEESESDYFTAVDELVAQEGEGELGSGHLNNQELTSGLFYGYVVVDVPLLVSNLEGVPPAAWQEADRTLAAEVVRRLLHLIATVSPGAKLGSTAPHAYAQFMLVEWGRSQPRTLANAFHRPVSLDGEGVLVNSYRALGRYVEQMDRMYGKLTERRLAAIDLPEAVQRQLQVDTLNAVPEIADWVAEKIQGGA
>NZ_AP019796.1|WP_161540352.1|563024_563564_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MKTQIQTEGPSITRGQAVGKAAGLLASEALSSGERAELRRIAFEAPFTAALWKVLFYLRDEGAPVRIGDEADERCWATLLMGMAHCIKLHDYQVPLGRALAEAGWSELRFTQLLRARGPQLAVFLRRMAQYLSAKNQLANWADVADLLFEQEGAKADTVRLRIARDYYARRYQQEREAA
>NZ_AP019796.1|WP_161540351.1|561468_563028_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MMRYALLDEPLIRVRFKDKTVRGCTLPEVIVALLRDAVLGFEALQPHQQQAWHSFLVQLVAMAVARITGDAFPKEAARWRQALVELAGGEEAAWYLVVSDLSRPAFMQPPVPEGSLEAARYKADVQTPDQLDVLITAKNHDLKARRIVQPRPEHWLFALVTLQTMEGFLGRGNYGIVRMNGGFGNRPLVGLTRALSPGAHFRRDVQVLLDARLSFADRYDLGGHALLWLLPWDGKKQSGIPLETCDPYFIEVCRRIRFLEENGHIVCWRANTEGPRVAAPKELNGVTGDPWTPVEKSDKPKALTVSDSGFTYRLLQQVFLSGDYEPPVALAFREDEKDGVYLVARTLVRGQGKTGGLHFRIVPVSQAAARWLSGSEERRTKLARRAEQRVRLAADVQRKVLYPALAALLSGGRDARVEWEQVTPWIEAFDRAVDAQFFDRLWASVEQDEETARRDWERFLLTEARRQFAVAEHGMPVASAHHWRARSRAHAIFEARSREVLPYAFNATRSLSTEQEVRS
>NZ_AP019796.1|WP_161552300.1|560870_561452_+|hypothetical-protein
MEVEKSETPQASSFGVSLLAIGLGNPLIQNGGKVMCISRRSQVDGAVLRILLRHNGQLAVRELNDTAGHFIINSSTRILVRYASGKNGRWRFTLREEDIATLLNDYAQSGLFGAYLILVCGQEAVGVLSPDEWCQLLDLGGNYKVQTITICRDARCQMEVTGTRGRLAYRIPAARFPRMILGQRGFRRRPQVT
>NZ_AP019796.1|WP_161540350.1|558142_560773_+|CRISPR-associated-helicase-Cas3'
MEGAPSPAQFWAKLRYTEERHPENIVAWHPLVAHAADVAAVVEALLQRTLLRKRLARLIGWNDLAEVHVARLAVLAALHDAGKANHGFQDQAFDPRVRSPGHVRPIVEILCADEPARWLEPLKIGEMAGWFVSEEVFYHFLLATWSHHGRPVLPEGDFRAHYWRPNARRDPRAAWRRLAELVRLWFPAAFADGAEPFPADPRFQHAFNGLLTLADWIGSDTRFFPYADETADPMCPIERAREGARQALQSLFLDAAGGRKALGDVPVGFRGVIEAGTPYPIQQACYDLPVHPQGSLTILESDTGSGKTEAAVARFFRLYQEGLVDGMYFALPTRSAASQIHRRITEIVARVFPEAHRPPVVLAVPGYLRVDEAEAVRLPDFQVLWDDEALRYRGWAAEHPKRYLAGPIVVGTIDQVLLAGLQVSHAHMRAAALLRHFLVVDEVHASAPYMTTLLERILAFHLAAGGHALLMSATLGSVARVRYATKGGTPPPLDEAEGERYPLLTHVDAGRQRLETVSAASSGREKPVTLRLEPIASDPQAIAERALQHARAGARVLLIRNRVEDCLAVQRALEEAACDDRSLLLTCNGQPVPHHGRYAPEDRRALDAAIEAAFGKNSPKRGIVAACTQTVEQSLDIDADLLITDLCPIDVLLQRIGRLHRHERPRPKGYEQAVCLVLTPAERDLTRTIQPDGGARGPHGLGTVYPDLRVIEATWRVLEGQNLWQIPRDNRRLVERATHPAVLQQIVREKGERWEAHQRHILGQEAANRYVPEITGLHFERPFGAHPFGRDIAPRTRLGDDDYRVELPEPVLGPFGWPVGTLPVASWMVGDELPEEPKARDVTPFDGGFSFVFAGRRFHYDRLGLRKDFNEALELS
>NZ_AP019796.1|WP_161542349.1|557619_558123_+|3'-5'-exonuclease
MPLEVAPLLFFDVETSGLRPDRGAAIVELALLGAREPLLLWKGTSAQRLQRAQFRELFAHVREGVVVGHNLRFDFWFVTYEAGRLGLSVPPIRFIDTLGLARRLLPEQADYRLVALLHALGIEPDNPLHTAVADAQATRALFWKLVERGKLRTLADAGMKQLTWTHR
>NZ_AP019796.1|WP_161540367.1|569343_569832_-|DinB-family-protein
MTPWHRWLAYERYCIRPVVEALRSVPEARRLEPSYQRAVTLLGHLAVALECWLARVDGEAQSAVALFPTDLSVEEAAHRIDRALDHWEHLLSRLNAEELERTVSYRTTSGVAHRNTLADILAHLFAHGAYHRGQIMLLVRQLEGVPTQTDFIVWARTTQNPA
>NZ_AP019796.1|WP_161540368.1|570076_572626_+|hypothetical-protein
MKRSRFLKKAPWMLMLVALAVQAQAPEPVRTFVDAQGVWRRTDTGAELAFFGVNYTTPFAHAYRAHRLRRVDLRRAIEADVAHLARLRLNAFRIHVWDREISDHRGNLIENEHLDLLDYLIARLKDHGIAIILTPIAWWGTGYPEPDPKTDGFSDHYSKCELTADTTAWRIQANYLRQFIRHVNPYTGLSYRDDPDILAVELFNEPCHRTTPDTTTRYINTLVAALREAGLRKPIFYNISEGYTDAHGRAVCAADVQGITFQWYPTGLVRGRMLEGNMLPNVDRYAMPPAAFPECRNKTRMVYEFDAADVGGAYMYPAMARSFRAAGFQWATQFAYDPLFIADANTEYPTHYVNLVYTPAKAISLMIAAEAFRRLPRGVETGTYPESARFGPFRVDAARNLSEMVTDTAFFYSNTTDTRPPRPERLRHVAGVGSSPVVQYEGTGAYFLDRLADGVWRLEVYPDAYWVRDPFGRTGLHRPVARLVRRQRRMTIRLPDLGSDFSVQPLNPGNAHRPAVVAGAFGIRPGVYLLRAAGAAAVDSSWLRPVPFYLPPVAEVGLQVLHTPPVELTATDTLRVQVVADAAPDSVRLYVQRPGWRGFAAVRMVPLGGDRYGATLPPSVAQPGVLTYAVTVYIGGRAHTFPADEPRDVRDWDFAGRTFWQTALVTPEAPIVLLDPRRDADRLLLPRFGRGFRFAVEPVPTDEPGRWALRATASGPDPEAQGFVFRTELPATLRDRLARGSWTHLRVRARARQGVRRLEVALVDLDGVAWAATVTLREDWRDVRIPLHALRPVELALLPRPYPPFHPYFFRTTPRADRIDPARLDGLQFRVRAAEGALAFEVAEVALVP
>NZ_AP019796.1|WP_161552301.1|572631_573876_-|galactokinase
MPSAATESIVTRLLEAFAAHFGAPAPAVVARAPGRVNLIGDHTDYNDGFVLPMTLDRAVYLAVRPRPDRQVRLLSLNFDEAIRFEMGTPPADTPRWAAYVQGVVTELHRRALLPSGFEGVLYGDVPLGSGLSSSAALEVATLVTLQHLFGFAMSGEEAARLCQYVEHTYAGVQCGIMDQFAARLGRRGHALFLDCRSLAYRHVPVHLKDWLFVIIDSRAPRELAASRYNERRAECEAGVAFFRRFDPEIRALRDVSPELLWAHPDQPTPTIWRRCRHVVEENRRVQEAVVDLEQDRLEAFGQRMNASHDSLRDLYEVSSPALDLIVDTARQVEGVLGARLTGAGFGGCTVVLVHRDALPELEQRVARAYEATFGRQPAFYPLDHNVEAGPIWPETAALPVSSTSEGDEAGASEE
>NZ_AP019796.1|WP_161552302.1|573889_575419_-|solute:sodium-symporter-family-transporter
MTFGIVDLIAFVGFIAFVIGVSLYASRKEETGEDYFLAGRGLTWWLIGFSLIASNISTEHFVGMAGRGFELGLAIASYEWMAAVTLVIVAFFFLPKFLRAGIYTMPEYLEYRYNTTARTIMATFMMLAYVFVALATVLYSGALALEAIFGLDTVLGIWLIGLLAGFYTVYGGLKAVVWTDLLQGAALLLGGLLVTVLGFQALGGVDVFFTQAGDKLHTVLPWDHPEMPWVAVFIGGLWIPNLFYWGLNQFITQRTLGARSLEEGQKGIMLAALLKLLIPFIIVFPGIMAAILYPQEVTQADQAYPVLIRELLPVGLRGIMLAALFGAVMSSLDSMLNSAATIFTIDLYQRHWKKGQATPRELVTIGRVATAAFVLFGCLWAPIVGRTGSVFQYIQMFWGFISPGITAAFLFGLFSKRTPPEAAIGAMLLGIPVYGLLLWKLPHVAFLHHMMITFLVLAAFMWIVTKLRPLPEPPKMPDAPPIPMETSPRLRRMGLGIVGLTALLYLLFW
>NZ_AP019796.1|WP_161552303.1|575441_576497_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MEASWLAETPHRRRNALTGEWVLVSPHRACRPWQGLVESIPAETRPAYDPTCYLCPGNARAGGRRNPPYTETFVFDNDFAALQPDAPEAHWTADGLLEAHAERGICRVVCFSPRHDLTLAEMDVAAIRRVVDVWTEQYRELGERPEIRYVQIFENKGELMGCSNPHPHGQIWAQETIPNEPRKECHQQQAYFERTGRTLLADYLALELRLGERIVCANDHFVALVPFWAVWPFETLVISRRPVPSLLELTDAERDGLADLLKRLLVRYDNLFQISFPYSAGFHQAPTDGRPHPEWHLHLHVYPPLLRSATIRKFMVGYEMLGMPQRDLTPEMAAARLRALSEVHYRMQPAS
>NZ_AP019796.1|WP_161540372.1|576756_577098_+|DMT-family-protein
MHPLWQTIGLLMLSNLFMTFAWYGHLRHLGDRPWYVAVLVSWSIALFEYMLQVPANRIGFTVLNLAQLKILQEVITLSVFVPFAVFYMNQPIRLNYLWAALCLLGAVYFIFKG
>NZ_AP019796.1|WP_161540373.1|577194_578112_+|dihydrodipicolinate-synthase-family-protein
METPGSNWQGVFPAVTTPFTEDDRVDVPGLHRLVDFLVEGGVDGLIMLGTLGEGSVLTPEEKELVLREALAAADGRVPVLAGVAETTTRAACRFAERAAALGVQGFMALPALLYNALPHETLTHFRTLARATELPLMLYNNPVLYGVDVTPEMLDELADEPHIVAVKESSEDVRRITDIRVHTGDRYRLFVGVDDLVLEGVAAGADGWVAGLTNAFPRESVALFRLAREGRLDEARRLYRWFMPLLHLDASPQLVQHIKLAQALVGVGSEHVRPPRQPLQGERRRAVEALIRKALDTHAEIEDLL
>NZ_AP019796.1|WP_161540374.1|578131_579580_+|aldehyde-dehydrogenase-family-protein
MQTKIYGHFINGEWVVGTETFPNVNPSDTRDVIGHYAQGTEADVRAAVEAAAAAFPRWAASTPQERFDVLDRVGSEILARAEELGTLLAREEGKTLKEAIGEVKRAGQIFKFFAGEALRMSGEHLRSVRPGVEIDLIREPVGVVGLITPWNFPIAIPAWKVAPALAYGNTVVLKPAEQAPASAWALAEILSRSGLPPGAFNLVLGDGSVGAALVAQPGVSAISFTGSREVGRQVAEACARRMIRVQVEMGGKNPLVVLDDAPLEAAVEAAVNGAYFSAGERCTASSRLIVTEGIYERFRAALLERIRQLQVGPALDPNTDVGPVIDEAQMQRILHYIELGKQEGAVLACGGQRLELETPGFYLAPTLFDETDNRMTINREEIFGPVAALIRVRNYEEALAVANDTEYGLSAGIFTRSLRYAHHFRRHVQAGTVMVNLPTAGLDYHIPFGGHKASGYGPKEQGRYAQEFYTVVKTCYVAPEIA
>NZ_AP019796.1|WP_161540375.1|579583_580240_+|GntR-family-transcriptional-regulator
MKVQRASLADRAYEVLEHRLVTLQLVPGTVVTEKELIQEVGVGRTPLREAVLRLAQEQLVTILPRKGIYISEINLTDQLAALEVRRELDRLMARRAARLARPQERVQFAELAQSMRKLGEEDLDLFMHLDRLFDRLVEKACHNRFAVRAAAPLHTLGRRFWYAYHHEGDLEASIQLHAHLMEQIAEGDAEAAEAAAVELVDAMIGFTQRVLQQTIEPR
>NZ_AP019796.1|WP_161540376.1|580236_582000_+|DUF885-family-protein
MKTLRWSGLVLLVGLLSACRPAPDPAAQFRALLDESWAFLLRENPLMATYVGVHTYDDRLPSVTAADLARRDSFWAQVEQRLDAIDPAQLPKNDRITYDIFRHWLTHQRAVYRYRGYLIPITSDEGFHIALGRLPEWLVLRTEADYRNYLARLKAVPTYMAQHIALMREGLRQGITQPKVVLQNYTATITGYIVEDPAQSVFFRPFREFPPGIPDSVQQQLRAEARRVIREQVIPAYRDFLQFMETEYIPGARTTTALSDLPDGRAYYEHLVRYYTTLELTPEEVHEIGRREVARIRAEMDSVMRRTGFRGSFQEFLQFLRTDPRFYARSADELLREAAWIAKQMDGRLPALFHVRTLPRQPYGVAPVPPHLQPRYTGGRYIPAPPESRTGAYYWVNPYPLNGRPLYVLEALTLHEAVPGHHLQYAIRQELTDVHPFRRWVSFSAFGEGWALYAEKLGKEVGFYADPYREFGRLTYEMWRACRLVVDTGLHALGWTRRQAIDYMVANTALSLHEITTEVDRYISWPGQALAYKMGELTILRLRREAETRLGDRFDLRDFHEVVLRQGDVPLGTLERLVHTYIEQKVE

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Crispr_ID: NZ_AP019796_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_4

610758-610898

Orphan

Consensus_repeat	Method
GAGGCGAAACTGGAAAAGCAGATCGCCGAGGTGGAGGGTCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019796_4

>merge|NZ_AP019796|4|610758-610898|CRISPRCasFinder
GAGGCGAAACTGGAAAAGCAGATTGCCGAGGTGGAGGGTCGGTTGAATGAACGGATCACCGAGGTGGAGAGTCGGCTGAATGAACGAATTACCTCGGTGGAAGCGAAGCTTGAAAAGCAAATCGCTGAAGTCGAAGCGCGC

>NZ_AP019796|4|4|610758-610898|CRISPRCasFinder
GAGGCGAAACTGGAAAAGCAGATTGCCGAGGTGGAGGGTCGG	TTGAATGAACGGATCACCGAGGTGGAGAGTCGGCTGAATGAACGAATTACCTCGGTG
GAAGCGAAGCTTGAAAAGCAAATCGCTGAAGTCGAAGCGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_014066210.1\|609061_609316_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_AP019796.1\|WP_161540395.1\|608534_609041_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540393.1\|604130_607274_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl\|CDD\|226220
NZ_AP019796.1\|WP_161540401.1\|626192_627098_-\|KaiC-domain-containing-protein	unknown	unknown	gnl\|CDD\|274831
NZ_AP019796.1\|WP_161540394.1\|607286_608528_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_AP019796.1\|WP_161540390.1\|600622_602092_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_AP019796.1\|WP_012843044.1\|624885_625755_+\|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl\|CDD\|224238
NZ_AP019796.1\|WP_161540398.1\|616876_618508_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223651
NZ_AP019796.1\|WP_014066211.1\|609270_609522_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161540389.1\|599345_600638_+\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|225044
NZ_AP019796.1\|WP_161540399.1\|618604_621550_+\|glycosyl-hydrolase-115-family-protein	unknown	unknown	gnl\|CDD\|379757
NZ_AP019796.1\|WP_161540391.1\|602095_602782_-\|response-regulator	unknown	unknown	gnl\|CDD\|223816
NZ_AP019796.1\|WP_161540397.1\|614608_616639_+\|alkaline-phosphatase	unknown	unknown	gnl\|CDD\|224699
NZ_AP019796.1\|WP_161540392.1\|602945_604127_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_AP019796.1\|WP_012843042.1\|621933_622449_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_AP019796.1\|WP_174238064.1\|611034_613371_+\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319849
NZ_AP019796.1\|WP_161540400.1\|622488_624861_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224446
NZ_AP019796.1\|WP_161540396.1\|613371_614361_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225829
NZ_AP019796.1\|WP_161540388.1\|598706_599327_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012843045.1\|625818_626190_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|163591

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_014066210.1\|609061_609316_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	6.26337e-20
NZ_AP019796.1\|WP_161540396.1\|613371_614361_-\|hypothetical-protein	gnl\|CDD\|225829	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms].	6.16516e-07
NZ_AP019796.1\|WP_161540393.1\|604130_607274_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019796.1\|WP_161540401.1\|626192_627098_-\|KaiC-domain-containing-protein	gnl\|CDD\|274831	TIGR03878, thermo_KaiC_2, KaiC domain protein, AF_0795 family. This KaiC domain-containing protein family occurs sporadically across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.	1.40005e-163
NZ_AP019796.1\|WP_161540394.1\|607286_608528_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.66374e-36
NZ_AP019796.1\|WP_161540390.1\|600622_602092_-\|HAMP-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.82718e-58
NZ_AP019796.1\|WP_161540398.1\|616876_618508_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	8.4047e-165
NZ_AP019796.1\|WP_161540389.1\|599345_600638_+\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	8.12951e-43
NZ_AP019796.1\|WP_161540399.1\|618604_621550_+\|glycosyl-hydrolase-115-family-protein	gnl\|CDD\|379757	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.	0
NZ_AP019796.1\|WP_161540391.1\|602095_602782_-\|response-regulator	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.9669e-85
NZ_AP019796.1\|WP_161540400.1\|622488_624861_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_AP019796.1\|WP_161540392.1\|602945_604127_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.65009e-34
NZ_AP019796.1\|WP_012843042.1\|621933_622449_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	2.13064e-83
NZ_AP019796.1\|WP_174238064.1\|611034_613371_+\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP019796.1\|WP_012843044.1\|624885_625755_+\|xanthine-dehydrogenase-family-protein-subunit-M	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.99844e-86
NZ_AP019796.1\|WP_161540397.1\|614608_616639_+\|alkaline-phosphatase	gnl\|CDD\|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	6.18375e-84
NZ_AP019796.1\|WP_012843045.1\|625818_626190_-\|hypothetical-protein	gnl\|CDD\|163591	TIGR03879, Uncharacterized_protein_MJ1053, probable regulatory domain. This model describes a common domain shared by two different families of proteins, each of which occurs regularly next to its corresponding partner family, a probable regulatory with homology to KaiC. By implication, this protein family likely is also involved in sensory transduction and/or regulation.	8.3654e-14

>NZ_AP019796.1|WP_014066211.1|609270_609522_-|hypothetical-protein
MPSEKARIQFITDQRGRRIRAVLPLKRYRELLEAEEELEAIRAYDQARASEDEAIPFEQALREIEAQRQCRTKSSSFEAPRKR
>NZ_AP019796.1|WP_014066210.1|609061_609316_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MPYEVFILRSAQKALADLPERDYQRVCRAIRALRDNPRPPGSKKLTGREGWRLRIGAYRVIYEIDDAQRRVTILAIGHRRDIYR
>NZ_AP019796.1|WP_161540395.1|608534_609041_+|hypothetical-protein
MNAAHLHLLTNHLPLFAVLLGLLVGLYGAWRREESVVRVALMLFVLGALGAVAAYFSGHGAEEIVEELGRSHDAIEAHEETGNLAAYLTIALGVLSLGTLLRRGPVAPAWRTALFVLALVVLGVVGYAANLGGRISHPEITGAALQETTRSPVPGPEAAEEAEEPHED
>NZ_AP019796.1|WP_161540394.1|607286_608528_+|TolC-family-protein
MLGLLLGLSLLLGNPNVAPAPDTLGIQEALALALRHHPQLQALRARQEALQGRRLQAYGIETPQLYFFREGIGSGQAFAEQRWTLVERIDFPLVTYYRLQANGLESRALTAELEATTARIRADVKRAYTDVLYAQELVHLRQEEVALLEQLREAVQARVAAGLATDLEVARTEIQLADAQSRLETARRDFLQARYELFRAVGLDPEAQRYDIVFPDTLAYVTVEIPQEAVLARLDQLPELHSQQAQLQAARVNIRQARASLLPQLQLDVYPQDYGSGYRFVGFQIGISLPLGFLPGYRGRVREARALYEMRRWELEDLRLQLKKQAEQAWHGYETARIVVERYARQIRDRSRTLLHRLQRGYRLGEVSLIELLDAQRLVLESEQRYYEALRDYYHQLIELERFLGHELTFTNP
>NZ_AP019796.1|WP_161540393.1|604130_607274_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MLHRLIDFSLRQRFVALSLVALMAFGGIVALERIPINSLPDVTPVQVLIITKAGRYSPYDVEQLVSFPIETAMTGLPRVKEVRSISQFGLSAVTVEFEEGTDIYFARQLVAQRLQDVRDQLPPDVSSPQLGPISTALGEIYQYVVRGDGYSLTELREIQDWIIAPQLRAVPGVTEVNSFGGFVKQYEVIVDPEQLRALRLSLRDIIDAIERNNSVSGGNYLEHNQEQYIIRGFGQIRSTDDLERIIVARRGERPIYLRDVATVRLGRQIRQGAVTQDGKGEVVTGIVMMLRGENGREVIRRVEEKIREINPRLPPGVRIEKFYDQSDLIARTTGTIKENLLEGGFLVIAVLLLLLGEIKGALIVASVIPLSMLFAFIGMRAFGLAANLMSLGAIDFGMIVDGSVVMVEHMVHRLEADRSGRSRLALLRQAAHEVARPIFFGVLIILMVYVPIATFRGMEGILYRPMAITVASAVFGSLLLALVYVPAIATLVFRRGVRVRRNYLMDWLRPRYRRFLEKSLERRKTTLAVALLVFGAALALLPFLGTEFLPELDEGSILIEEVRMPSVTLETSVENANWLAGQLIRHIPEIQTVVPKTGRSDLANDWMGVHQTDVWIILKPREQWRPGMTKEKIIEQIRPFLETEPGLAYNFTQPIAMRVDELTSGVKSDIAVKLYGENLDTLAAVAARIARLLPDLPGTDNFYVEKFAGQPYVNIEIDREAIAAFGLNVEDVQQVIEAGLGGAPAGQVFEGQRRFDIVVRFPEAYRNNFEAIMEAPVTLPGGGTIPLRRVAHIRAEEGPREIARENGWRRLVVGINIKGIDIGTYVSNLQRAIETQVKLPPGVFLEYGGTFENQQRAMRHLYVAVPLALLIIIGLLYLMFGEMRYPLMILSVLPLALAGGVFALWLRGMYLSISAAVGFIALFGVAVLNGVVMIAHLNALRRQGLSVREAVLQGATDRLRPVLMTALVASLGFVPMAFNTGPGSEVQRPLATVVIGGLITATLLTLRVLPTIYDWLERDDRPPRGPEPEWEEDGQMAASVSAATAQT
>NZ_AP019796.1|WP_161540392.1|602945_604127_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRITLTILVLLGLSACRRAPIEALLPEAIGVPPSLQADSASAKYRMVRLDSAQQRRLQVQVVPVRHERATYTVSIPGEVYPAPGLMAQVSTPIEGRVAHLNVHEGEPVRRGQVLLELESLAFAELISDFLQAQAEEAYLARQVARLRQLVTEQLTPQSTLDQTEADYLRAQARRQAAEVRLRALGVTPEVARALGQQERPLLPLRAPIDGYVDQHQVELGQAVSANQTLMTIVDPSRVHIRGFLAPDDALGLQPGDSVRLVLQVPDSLTLGARVHTINPALDPENRAVVVNILASTHQGWPRPGQNVRLWIRLRTPRPVYVVPLAALTYDGQQAIVFVQQAPDTYEVRPVTVWRTDAAQALLLDGVREGERVVVHPVFSLKALMRYSEFAEE
>NZ_AP019796.1|WP_161540391.1|602095_602782_-|response-regulator
MPRPILLVEDEIAMAALLRQGLEEEGYTVEWVLTGEEALARLEHLEPALLVLDVRLPGMDGVEVCRQVRQRWPDLPVLMLTALDDVENRVRGLRAGADDYLSKPFAFEELLARIEALLRRSKRQPTRHLLRDGPLTLDLNARTATCGERPLSLTPREFDLLAYLMQHPRRAISRLQIYREVWGHDFDHGTSLLEVYISYLRRKLQEAGCPGYIATVRGVGYRYEPAEG
>NZ_AP019796.1|WP_161540390.1|600622_602092_-|HAMP-domain-containing-protein
MPPSSRHPSFLNRLLVQSGGTLIAALALLGLLAWLAAYGWINELARLPLRNEIQLVASRIVRDDHLDVDAYYWDEPHHRLLERHVDPYFLQVFDARGHLIRQSTNIRLLSDRYPEVLLHAPVQQEPFWKPLQTFQVGEYRLYYLVFPLHDPAGRYLGAIQLARFEPGFVALYRQLALGLFVSWVLLSGLILTLLAVSGRRVLRPLHELTRATAALSPESLHEPIRLTSPLDRETAQLLATLNALLHRLHRAFDELRRFTANAAHELKTPLAILHGQAELALRRPRSTDSYRTTLRQILDQTEQMTRLVQHLLLLSRLDQPEAAFPFAPVDFSELAAREQELFATRARTRGVTLTASLAPDARLYGVETLLQEVVRNVLDNAVKYTPQGQIDVVVRATGNHILFEVRDTGIGIPHEALPHVTERFYRAPQTAPGIEGHGLGLALVARIVALHQGTLEITSEPGQGTTVRIALPALSVTASEPTPMAQLPR
>NZ_AP019796.1|WP_161540389.1|599345_600638_+|PQQ-dependent-sugar-dehydrogenase
MKSSRKIVAQWLLVLLLAGCNGINSRPVQQSLACDPDNGGITLPEGFCALVVADNVGRARHIVVRDNGDIYVALMRLQNGHGIAALRDTSGDGRADIVAYFGDVPGTGIDIRDGYLYFAPDTALLRYRLVEGELLPQEPPELVVGGLPERGQHAAKTFAFDEAGYVYINIGAPSNACQSRDRQRGVPGMDPCPLLERYGGIWRFRTDVLGQRQDDGLRYATGIRNAVAIAWNPFADALYVVQHGRDQLDTLWPEYFDAEDNANLPAEEFFRVDEGDDFGWPYCYYDPIQNKKVLAPEYGGDGQTVGRCDQFEDPIVAYPAHWAPNDLIFYDGTQFPERYRGGAFIAFHGSWNRAPLPQAGYNVVFQPMNADGTPAGDWEVFADGFAGTDQIRSTGDAKHRPMGLAVGPDGSLYISDSVRGRIWRVIYRGS
>NZ_AP019796.1|WP_161540388.1|598706_599327_-|hypothetical-protein
MSIRRAPIYKTVLKIALLAAVVVLNWQCRTLRAWQALRQVDFYIDRVSDVNLAGVELDHVRSYEDLTLEQTLRISQALARGTLPLRFRLHLIAENPADNPVTARLERLEWTLLLDDHPTLSGTLDQTYRLPPGEPQEIPLDFELDLLDFFEKNLQDLVELALALAGTEGVTKRVSLEARPFIETPLGPLSYPRPIRILTREVGRTS
>NZ_AP019796.1|WP_174238064.1|611034_613371_+|cadmium-translocating-P-type-ATPase
MTDEAQDRACAELVEQSAAEADGLVQVEVDPTSGRLTLTYDRARLSPADAERLARRLVAAFEERPAHCTLHVQGQGGRSCETCALALERRLRALPGVRQARVSFRGGVLHVVYDATRTSPEELARVVERFGVRTLPPKPEVSWRLWLEGTRREALFVALTLAGLATGWLAGRLGAPLVAAVAYGVAYVFGGWDGLRNGIDALRHRTVDVDLLMVLAALGALVIGAPAEGATLLFLFSLSNLLQHYAIGRSRRAIQALMELRPDRARVLREGQEVEVPVEEVRVGEIFVLRPGDRVPLDGVIVRGESALDESSITGESMPVDKGPGQEVFAGTINTTGSLEVRVTRPASASTLARMIELVEQAQSEKAVTQRLIDRLEQPYALGVLAMTALAIVIPVVFLNEPFARAFYRAMTLMVAASPCAVVISTPAAVLSAIAAGARRGVLFKGGVYVEALARVRAIAFDKTGTLTEGRTRLVQVGVRKAAGLSEDELLRLAAAVQQRSEHHLARATVAAARERGLTMPEAEGFQAVVGKGVRAVVEGATVHVGNLRYFEAVWQAADGFDEGRAAVETLARQGQTAVLVARERDGRREILGWLAFADRLRPGAAETIRRLRELGVVHVALLTGDNRHVAEAIGREAGVDAVHAELLPAQKVAHVKALVDRYGAAAMVGDGVNDAPALAAATVGIAMGGAGTDVALETADVVLMRDDLGQLPYVLALSRATRRTLLVNFAIAFGMMGLMIGAILLQGLPLPLAVVGHEGSTVLVSLNGLRLLRFRAS
>NZ_AP019796.1|WP_161540396.1|613371_614361_-|hypothetical-protein
MTPRALLWMVLLVVAGCRTTQPVTVTLPASLPEPPTVLLPWHDGWLLGGGTVLWWLRDERPIHRWTLPAAVQGGVVDPEGVLWLGTGAGLVRLVAPTAQPERVPLPALNRFPSVTALTLDAQQRLWVATEQHGVFLRADTSWRPVLAAAPVYALATTTDGTVWVGTGIGLFRQTSDGWLVYSEEGTANHGLPDNIVERLVALPEGLWVIMSEAVSFFPVDEVDHPVEFAYLGHPGNRIHDVVDLPESGYLLTTDDGLVWLRELPHFDTHGGLRELRVMEYDLARPLSSERLDLPDEPITRLDRRGNWLYLAGPSGLFRRLLPPAALAHR
>NZ_AP019796.1|WP_161540397.1|614608_616639_+|alkaline-phosphatase
MRRALQWALMLLLCLPASLTAQTRKHVILYIGDGHGIAPRTATRMALGQGRPGSRFSDEPNFHLLAQDRLRYNAMVTTHSLNSWITDSAPGASVYAVGKRGKIDNEFISLDPETFEPLETILEAAKKAGYAVGLVTTTRVTHATPAAFAAHIWNRDLEDYIAAQYLSASQEEYEAIFNAGPGYDPARDWVLPEPKVGVEIDVILGGGARHFLPRNNPDVNGNATVRDRNGQPITDGNGQPVVLSGRRSDNVDLIEIAKDRGYVYVNSRDALLGILDRLDEFSPENDAKLLGLFSSSHRSYEAERQQLYPWEPALWEMTMVAIEVLKRKSDKGFFLVVEGGRIDHLEHANAGGIGYEGDRYTVVADVEAIIADDVYGGGTDRLAGVYGSDYMIKEVLDFDYAIEEGLNFMNDATAGQTLILSTSDHECGGFTVVGLHDAEDAQGNGTLIRTYARQPEKTDGQFTPVPENIDRGDDEIGGWFPEYELVEFQGKLWPEPAGPNARRIVIAYGSNPLVNGNGGTIGTTPGNHTPQDVWVGADDNVDGAFASRITGRGLLDNTDLFPIMRDFLGVTTTSNERLPDEKRSGLGAVEAYPNPFGEKLAVTLAIDRPQTVSLEVYNALGQRVRVLQSSARLTPGTHTITWDGRDDTGAGVASGLYLVVARSGEQVVSRQVVRIR
>NZ_AP019796.1|WP_161540398.1|616876_618508_-|FAD-dependent-oxidoreductase
MQPLLHREAFLERLRKQEQWDVLIIGGGATGLGVALDAAARGFRTVLFEQHDFGKGTSSRSTKLIHGGVRYLREGDLGLVREALRERARLRHNAPHLVWPRLFVVPCYRWWERPLYGIGLWLYDRLAGKGRLGRTRRLDAVETHALLPTLRRNHLRGGLAYPDGQFDDARLLVHLAWTAAEHGAVVLNYMPVEALMGTRSRLEGVVVRDLESGERFEVRGRVIVNATGVFADTVRRMDNPNATPLIIPSQGVHLVLPRRFLPGEAALLIPRTDDGRVLFVIPWHGQVLLGTTDEPVPDPELEPLPTEEEITYLLTHAGRYLEPAPTRTDIRAVFAGLRPLVQRGGMQEDTAHLSREHVILVSRRGLVTVTGGKWTTYRLMAEETVDRALQVAGLPHRTSPTATLRLHGATRHVNVADPWHVYGTDARHLRRLMEAEPELAAPLHPRLPYRMVEVVWAARYEMARSVEDVLARRTRALFLDAAAALEAAPAVAHRLAAELGRDNTWVNAQLRDFVALVRRYVPDLHAHDPNDASPSEQTAPRRD
>NZ_AP019796.1|WP_161540399.1|618604_621550_+|glycosyl-hydrolase-115-family-protein
MLSQMRALLLLLTGLLLIESAPAQPLSSYVQDACPDDCFALAENGRVVSIVASRADDPVVLRAIEDLVADLERVTGRRPVVHYDTWPAEPSLVVGSLAHSPLIRELVETGQLAPGEIEGRWEAFLLQVVPDVRGADRLVIAGSDPRGTVFGIYDLSRAMGVSPWYWWTDVPVPHRSALYVARTLRRTDYPRVRYRGIFINDEAPALSGWAYEKFGGFNHRFYARVFELILRLKGNYLWPAMWGRSFFEEDSLNIPTAVRYGIVIGTSHHEPMLRAHVEWQWHGKGPWDYTKNAATLQAFWREGIRRMKHNEAIVTVGMRGDGDEPMSEETAIELLERIIRDQRRILAEETGRDPSEIPQAWTIYKEVQDYYEKGMRVPEDITIVFTDDNWGNVRLLPPPGSPPRKGGYGMYYHFDYVGAPRSYKWINTVQIERTWEQMRLTYRHGVDRLWVVNVGDIKPMELPLTFFMDMAWDPERFTAADLPRYYERWAAEQFGPRYAAEIATLLATYTKYNARRKPELLDADTYSLHHYREFDRVVADYRALAARAQALHERMPAAYRDAFYQLVAYPVMASANLYEMYHALALNRLYARQRRAATNRMAEKVRRLFARDAELAAYYNHVMGGGRWNHMMDQPRIGYTSWDDPDENIMPEVETIAVPDTALPAVAVEGQPEAWPGPDAPATLPVFDDLTRPVHYLEVFNRGRQPFRFRIQAESPGLVFSSTEGEVTEQQRIQVTVDWAKVPPGAAQLVFYVEGPGMRVPVVAPLERIVDRIPPDFEGFVARDGHLAIEAHHFSRQVPAGEARWEVIPNLGRTASAVTPLPVTMRAQAPGADSPRLEYDVLLPAPGRIRVHLYLTPTYNFVNRPGGLRLAVSLDDAPPQLVEVHAADTIPDWRYGRVWMDAVARNVRIVTSVHEITRPGPHTLKLWAVDGGVVVERIVIDTGGLRPSYLGPPESPFVRNRRTHWPPEPEAGSAHAARATR
>NZ_AP019796.1|WP_012843042.1|621933_622449_+|(2Fe-2S)-binding-protein
MRHTIQVTVNGQTHRVEVEPRLLLVELIRDVLGLTGTHVGCDTSQCGACTVHVNGEAVKSCTMFAVQADGCEITTIEGLARDGALHPLQEGFWQEHGLQCGFCTPGIIMAAADLLRRNPDPSEEEIRHALEGNFCRCTGYHNIVRAIQYAAARMRGEAVVPRGEAASTGAS
>NZ_AP019796.1|WP_161540400.1|622488_624861_+|molybdopterin-dependent-oxidoreductase
MEARGYIGAPIRRVEDRRFVTGRGRYTDDIVLPGMLYAWIVRSPHAHARIRAIRTEKARQHPGVVAVFTGKDLLDDGVGSLPTGWQIGPDMKEPPHYALAVDKVRYVGDGVAVVIAETKAAARDAAELVEVDYEELPAVVDAAEALKEGAPLVHDDAPGNLCYVWELGDREATDRALATAHHVTKLEFVNQRLIPNAIEPRSAIGHYDPGRDELTLYTSSQNPHLIRLLLSAFVLKIPEHKVRVISPDVGGGFGSKIFHYPEEVICAWSSRKLGRPVKWTAVRSESFVSDAHGRDHVTTAEMGFDRDGRIVGLRVRTIANLGAYLSTFAPGVPTWLYGTLLAGQYKTPHIHVEVKGVFTNTTPVDAYRGAGRPEATYVVERLVELGAHELGIDPAELRRRNFIQPDEFPYQTPVVLQYDSGNYEGALNKALEMADYWKLREEQKRAREQGRLIGIGLSCYIEACGLAPSKVAGAIGVRAGLYESAAIRVMPTGKVQVFTGTHSHGQGHETTFAQIVAHELGIPLEDVEVIHGDTAEIPFGMGTYGSRSLATGGSAIYRALEKIKAKARKIAAHKLEVAEEDLEFRNGQFIVKGTDRAIGFGDIALTAYVPHDYPEGLEPGLEENAFYDPANFTFPFGTHLSVVEIDPETGRVKLLRYIAVDDVGRIINPMIVEGQIHGGVAQGVGQALLEGAVYDRSSGQLLTGSLLDYALPRADDLPSFEVGHQETPCPHNPLGAKGAGEAGTIAATACVVNAVVDALYHLGVRDIRMPLTPERVWRAMRGLPTDGHAS
>NZ_AP019796.1|WP_012843044.1|624885_625755_+|xanthine-dehydrogenase-family-protein-subunit-M
MIPQTFAYRKAHTIDEALALLREHGDEAKVLAGGHSLIPLMKLRLSTPELLVDIGGIRELTEIRERDGRLELGALVTHRTIEFSELLRQKCPVLPEAAAQIGDPQVRNKGTIGGSLAHADPAADYPAVVLALDAEIEATGPDGRRTIPARDFFQGLFTTALRPGELLTRVRVPVMPPRSGAAYLKFPNPASRYAVVGVAAFVKLAPDDTCAEVRIGITGAAAAAFRATEAEKRLVGKTIDERTLAASLEDMVDPDDLLSDLAASAEYRAHLCHVLARRALRQAFERARG
>NZ_AP019796.1|WP_012843045.1|625818_626190_-|hypothetical-protein
MPVEVTPQPVDLDQRALQVFLKAIELAGGPRGLLERKRLTWLPSLMEAAYAVVLEAEHHRSVDEIARFLGLSTAATRNLLRASTEAVRERLEQEEPSERNVHIAGGLARLAYEALQREAARAG
>NZ_AP019796.1|WP_161540401.1|626192_627098_-|KaiC-domain-containing-protein
MAGAVSREAGPLVEAIVSLRHAAAAAPPLEGVPTGVEGLDELFFTTEWREGRPVRKPLGGIPRYAVLQVTGVADTGKSLLVEQFAVAQARREQVCLFLTTESPAPFVAMGLRTRAAAMGADWNAIEDRIVLVDAATHTILTQDLPTLFNTLAHAIKTYHVRAVVIDSITGLYEAREMLARDVVRPIFTFLKKWHQTALLVSQKRSGHELLTAEAAGGYAVGHILDGTLVLAKQPITSAQQARLYRVPIGETVRLFRIDGCRLCGHDTSTHLLEITPTGLVRIGPSLQTFHQEASVEPNYQT

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Crispr_ID: NZ_AP019796_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_5

1680847-1682485

TypeI-B

Consensus_repeat	Method
GTTTGTAGCCTACCTATGAGGGATTGAAAT	PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRT

24 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csm5gr7

The CRISPR arrays of NZ_AP019796_5

>merge|NZ_AP019796|5|1680847-1682485|PILER-CR,CRISPRCasFinder,CRT
GTTTGTAGCCTACCTATGAGGGATTGAAATCAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGGGTTTGTAGCCTACCTATGAGGGATTGAAATATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGATGTTTGTAGCCTACCTATGAGGGATTGAAATCGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAAGTTTGTAGCCTACCTATGAGGGATTGAAATTCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCGGTTTGTAGCCTACCTATGAGGGATTGAAATTCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCCGTTTGTAGCCTACCTATGAGGGATTGAAATAGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGCGTTTGTAGCCTACCTATGAGGGATTGAAATACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTCGTTTGTAGCCTACCTATGAGGGATTGAAATTGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCCGTTTGTAGCCTACCTATGAGGGATTGAAATATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGAGTTTGTAGCCTACCTATGAGGGATTGAAATTCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGGGTTTGTAGCCTACCTATGAGGGATTGAAATGACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTGGTTTGTAGCCTACCTATGAGGGATTGAAATAATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCGGTTTGTAGCCTACCTATGAGGGATTGAAATTTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGAGTTTGTAGCCTACCTATGAGGGATTGAAATTGCGAAGCACGGCGGCAATGACGCCACTCGCCACATGTTTGTAGCCTACCTATGAGGGATTGAAATACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAACGTTTGTAGCCTACCTATGAGGGATTGAAATTAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGAGTTTGTAGCCTACCTATGAGGGATTGAAATGCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTACGTTTGTAGCCTACCTATGAGGGATTGAAATAGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAGGTTTGTAGCCTACCTATGAGGGATTGAAATACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGGGTTTGTAGCCTACCTATGAGGGATTGAAATCGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTTGTTTGTAGCCTACCTATGAGGGATTGAAATTGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGGGTTTGTAGCCTACCTATGAGGGATTGAAATCGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTCGTTTGTAGCCTACCTATGAGGGATTGAAATCCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCAGTTTGTAGCCTACCTATGAGGGATTGAAATCCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAGGTTTGTAGCCTACCTATGAGGGATTGAAATA

>NZ_AP019796|5|2|1680847-1682484|PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019796|5|5|1680847-1682485|CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAATA

>NZ_AP019796|5|2|1680847-1682484|CRT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|235847
NZ_AP019796.1\|WP_161541074.1\|1672610_1674362_+\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
NZ_AP019796.1\|WP_161541083.1\|1685612_1686263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_AP019796.1\|WP_161541082.1\|1684532_1684784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541078.1\|1678518_1679034_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_AP019796.1\|WP_161541081.1\|1680353_1680620_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161542392.1\|1695632_1699028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012845294.1\|1694593_1695661_-\|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_AP019796.1\|WP_161541075.1\|1674358_1675276_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_AP019796.1\|WP_161541073.1\|1671775_1672564_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_AP019796.1\|WP_161541072.1\|1671417_1671750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541079.1\|1679035_1680028_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_AP019796.1\|WP_161541077.1\|1676009_1678493_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_AP019796.1\|WP_161541080.1\|1680039_1680303_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP019796.1\|WP_161541076.1\|1675272_1676049_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019796.1\|WP_161541074.1\|1672610_1674362_+\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.30443e-99
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.10785e-26
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019796.1\|WP_161541075.1\|1674358_1675276_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	7.82699e-86
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019796.1\|WP_161541076.1\|1675272_1676049_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.0578e-32
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019796.1\|WP_161541078.1\|1678518_1679034_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.31956e-64
NZ_AP019796.1\|WP_161541073.1\|1671775_1672564_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.19076e-40
NZ_AP019796.1\|WP_161541079.1\|1679035_1680028_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	6.34046e-162
NZ_AP019796.1\|WP_161541077.1\|1676009_1678493_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22529e-41
NZ_AP019796.1\|WP_161541080.1\|1680039_1680303_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5867e-27

>NZ_AP019796.1|WP_161541081.1|1680353_1680620_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019796.1|WP_161541080.1|1680039_1680303_-|CRISPR-associated-endonuclease-Cas2
MYVIMVYDVSVKRVARVLQIGRKYLTWVQNSVMEGALTQTQYQRLKQEVLKVIDKNEDSVLFYTLRSEHDLRKEILGIIKGAPSDIV
>NZ_AP019796.1|WP_161541079.1|1679035_1680028_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MRKRLYVVSSGRLRRRQNTLVLVGEQGNRYFPIEQIEEIHVFGEVDLNKRLLEFLTRQHILLHFYNYRGYYVGTYYPREHYNSGYMILRQAEHYMDEAKRLDLARRFVKGALFNLYKVVRYYRNRGKPLEDIELSLVQHRSRLDDIRDIAALMQAEGQARNAYYAAFDKILEKPDFAFEQRSRRPPRNRINALISFGNSLLYTAVLSEIYRTHLDPRIGFLHATNFRRFTLNLDVAEVFKPALVDRVIFTLVSKDQIKASDFNEELNGLYLNDRGRRVFLEAWEKRLKSTFYHRGLKRNITYRRAIRLELYKLEKHFMDEKAYIPFRLRW
>NZ_AP019796.1|WP_161541078.1|1678518_1679034_+|CRISPR-associated-protein-Cas4
MPDRITGTLVWYAMICEREVWLMAHELEPDRDDARLEWGRFLGQMSYPRSRKREINLPGMKLDIVERHGARIVVGEIKSSSRFVEATRMQMLFYLWRLRESGVEAEGELRFPQERRRMRIVLDASAEADLLRVIERVRAIMQQPFPPPAKRITYCRSCAYREFCWSDDPEE
>NZ_AP019796.1|WP_161541077.1|1676009_1678493_+|CRISPR-associated-helicase-Cas3'
MASGLYSHPGIPLEDHSNRVLALARKLLDETAPAWWKDARLRLLLEMAIALHDFGKATSFFQVALEGKRRTDAFSRHARLSALFFLHRATTWLGEDAEIHWLPLLFAYLVVLRHHTNLKSVADELHPPDEKEMDVLKCQIQAIPVQNVNAYLQALDVPDCIRAVLIFSPEAFLAWLREDAPTLLRGWRKQWRCWKQKAQNAEAYWAFLMGFSVLLDADKLEAGARGLLPRREDIPPNAVALYKERVFGPSSVGSLNEMREKAYQEVLAAPLSPDKHLYTLTLPTGMGKTLTGMAAALKLRALVHEKTGYAPRIIYALPFLSIIDQNADTLEQVLAVALGLTGGISASVAFSDHCASETRSDSPVESRLLIKHHHLADVQYRLQAHDGVEELDYATSRLLTEGWHSEIIITTFVQLFDTLLAWRNASARRVNRLHRAILLLDEVQALPALYWPLVRNLLIELAERLGVYVVLMTATQPYLLEDACELVPDPSAYFKSLDRLDVYIRLEPRRLEDFVADFKPEPDKSYLFMVNTIAAAQKLHRLLEETLNEKVAFLSTGVTPGERRKRIRDLKKGRYRFAVSTQLLEAGVDVDFDVVYRDMAPLDSLVQAAGRCNRNLRAGRRGQFHIVYWIDDRDRSYAHWIYDPVLLARTQTHLEKHTHLREPEFLNLLQDYFRDVWETGIPRDVADALWEAVCTLRFDGEKDKACVLKAKEAPGAHLSQFCLIEQQPYKRDVFVQLDERAEAVWSEAKKILLDLRRDHDVWKARERFARIRSCFYQYVISVALKPETAPYWDEDLRIYVVQREVLEHYYDAVIGFKRESEGDAMFA
>NZ_AP019796.1|WP_161541076.1|1675272_1676049_+|type-I-B-CRISPR-associated-protein-Cas5
MKVVAFDLWSDYGHFRRFFTTSSPLTYSFPPPTAVRGIVGAILGKGRDEYLLATSGLAIGVRVLTAVKRVRWGQNFIFTKGTSGQFDPTLLAQRKGNAQGMVRTQVKYEYLRAPRFRLYVGGNSALLEELEALLREHRTHYTVSMGLSELLADFSYVGTYGATALPPGTYELVSVFPVEILDPERGLENVLRSGVKLAKERAPVYLAPDRTPLLYQDVVLEMGGQPVRVTVSEKVYRLDNGDVVYLWPPVSTLIPASR
>NZ_AP019796.1|WP_161541075.1|1674358_1675276_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSTLQNRHEILFLYDVSWANPNGDPMDENKPRIDEETGVNIVTDVRLKRTVRDALMELGYEVFLREERGEDGSRRTKEDIMIYYESDPRKVLEQCIDIRLFGGTFALKGDDQNAFSLTGPVQFKFGRSLHRVKVELIKGTSIMPSAADKRQGTFTEVYVVPYSFIVFYGIANEKAAAATQLTEEDLEAMFKALWVGHKAGTDVITRSKFGHEPRLLVDIVYKPGTLTHMGELDKLVAFRSEKNDEAIRDISDGMLDLSGLVEKMAAYKDKIEKVRLRMDGRLRLVPDVNAALEVPVEPFTWSKEI
>NZ_AP019796.1|WP_161541074.1|1672610_1674362_+|TIGR02556-family-CRISPR-associated-protein
MLYALRTLGEILGGARLHDPVVADRVITLEFDAGGRYLGTSLHQFSAKDVPRYLYKKAKGSNPPTLTPTLLLNRKEIQKSLKNARNAYRKLRKLNRDLPELELLTKEGETLRKMEKGIVCALKNIPEKERVLFTVRIDGQWMGEREDFRSTLRSKFREEGRESAVDGVCAVCGEKTEISGDISPFKFYTIDKPGYVVGGFDKARAYRAFPLCYECRDLIRRGRQHAEENLSFDLAPNIRYLIIPDFILGADVVRQEVLAILTDEREQRQKRLHTLSRREIRRITEDEEEILELLSQEKDVMTFHFLFMSRQQGRETIDLYIQDVYPSRLRALLEAKAAVDRSMRVPREDGTWLEYNFTYATLHRFFSRSDPNRRNSDLLRHLYDLVDQTFRAVPVSTDYLMPFLMLQIRHDVVTPDRRDQGLYRFTILDALAVLLFIWWTTKMEVPMTVPSPTTLEEFLDGLPVLDSELKKGLFLLGALTERLLRVQGKERGSAPFWKVLKGLKMTEADLRGLLPRVRNKLQEYDRFRAGETALFQKAADYLAQTATPWKMSVDELNFYFALGMGLFPRVAQFVYPKKEEVEL
>NZ_AP019796.1|WP_161541073.1|1671775_1672564_+|CRISPR-associated-endoribonuclease-Cas6
MRVDLYLCPAGGRQKVALPVHYNVLLQGVVYSSLNEALARRVHDHGWQVGGRRLKLFTFSRLRGDFRCRSGRLIFYGKIAWTIASPEEEILESLVVHLLRAKVLQIGQAKLELLSVEVPVPPSYRRPICLRALSPITVYSTFETSDGRKKTYYYTPREPEFGRLVLENLRRKIRAWMGEDIPLDGATFRPVRVSNRNLVVARYKDTIIKGWTGIYELDAPESYFRMALDAGLGAKNSQGFGCVEVWAPTKSVSLKEVEAGKR
>NZ_AP019796.1|WP_161541072.1|1671417_1671750_+|hypothetical-protein
MFALEELQEQIAGELLTYAKEILRNHEEMTGVPLGDAEEMYEVLVQNEYPGLLARNAVRARDVDEFIELLEKDPDLIRAAEAAQNAVFYELEDYDRDTMRLVLVLALSLV
>NZ_AP019796.1|WP_161541082.1|1684532_1684784_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019796.1|WP_161541083.1|1685612_1686263_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019796.1|WP_161542391.1|1686520_1687411_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019796.1|WP_161541084.1|1687438_1692709_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019796.1|WP_161541085.1|1692965_1694594_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019796.1|WP_012845294.1|1694593_1695661_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019796.1|WP_161542392.1|1695632_1699028_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019796.1|WP_161541086.1|1699042_1701736_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019796.1|WP_161542393.1|1701808_1704517_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019796.1|WP_161552498.1|1706257_1707913_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSLLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV

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Crispr_ID: NZ_AP019796_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_6

1683359-1683792

TypeI-B

Consensus_repeat	Method
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	PILER-CR

6 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csm5gr7

The CRISPR arrays of NZ_AP019796_6

>merge|NZ_AP019796|6|1683359-1683792|CRISPRCasFinder,CRT,PILER-CR
ACTTCTAGCCTACCTATGAGGGATTGAAATACATGTACCTGCGCGGAATATCGGTTACGGAGATCGTTTGTAGCCTACCTATGAGGGATTGAAATCCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGAGTTTGTAGCCTACCTATGAGGGATTGAAATATCTGACAATATCCAGCAGGCGTCCATACGTAAACCGTTTGTAGCCTACCTATGAGGGATTGAAATTCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTCGTTTGTAGCCTACCTATGAGGGATTGAAATGACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCGGTTTGTAGCCTACCTATGAGGGATTGAAATGAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTGGTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019796|6|6|1683359-1683792|CRISPRCasFinder
ACTTCTAGCCTACCTATGAGGGATTGAAAT	ACATGTACCTGCGCGGAATATCGGTTACGGAGATC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019796|6|3|1683359-1683792|CRT
ACTTCTAGCCTACCTATGAGGGATTGAAAT	ACATGTACCTGCGCGGAATATCGGTTACGGAGATC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019796|6|3|1683424-1683792|PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|235847
NZ_AP019796.1\|WP_161541074.1\|1672610_1674362_+\|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl\|CDD\|378190
NZ_AP019796.1\|WP_161541083.1\|1685612_1686263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_AP019796.1\|WP_161541082.1\|1684532_1684784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541078.1\|1678518_1679034_+\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_AP019796.1\|WP_161541081.1\|1680353_1680620_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161542392.1\|1695632_1699028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012845294.1\|1694593_1695661_-\|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_AP019796.1\|WP_161541075.1\|1674358_1675276_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl\|CDD\|274217
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_AP019796.1\|WP_161541073.1\|1671775_1672564_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_AP019796.1\|WP_161541072.1\|1671417_1671750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541079.1\|1679035_1680028_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_AP019796.1\|WP_161541077.1\|1676009_1678493_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|350688
NZ_AP019796.1\|WP_161541080.1\|1680039_1680303_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP019796.1\|WP_161541076.1\|1675272_1676049_+\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019796.1\|WP_161541074.1\|1672610_1674362_+\|TIGR02556-family-CRISPR-associated-protein	gnl\|CDD\|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.30443e-99
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.10785e-26
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019796.1\|WP_161541075.1\|1674358_1675276_+\|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl\|CDD\|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	7.82699e-86
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019796.1\|WP_161541076.1\|1675272_1676049_+\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.0578e-32
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019796.1\|WP_161541078.1\|1678518_1679034_+\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.31956e-64
NZ_AP019796.1\|WP_161541073.1\|1671775_1672564_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.19076e-40
NZ_AP019796.1\|WP_161541079.1\|1679035_1680028_+\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	6.34046e-162
NZ_AP019796.1\|WP_161541077.1\|1676009_1678493_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22529e-41
NZ_AP019796.1\|WP_161541080.1\|1680039_1680303_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5867e-27

>NZ_AP019796.1|WP_161541081.1|1680353_1680620_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019796.1|WP_161541080.1|1680039_1680303_-|CRISPR-associated-endonuclease-Cas2
MYVIMVYDVSVKRVARVLQIGRKYLTWVQNSVMEGALTQTQYQRLKQEVLKVIDKNEDSVLFYTLRSEHDLRKEILGIIKGAPSDIV
>NZ_AP019796.1|WP_161541079.1|1679035_1680028_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MRKRLYVVSSGRLRRRQNTLVLVGEQGNRYFPIEQIEEIHVFGEVDLNKRLLEFLTRQHILLHFYNYRGYYVGTYYPREHYNSGYMILRQAEHYMDEAKRLDLARRFVKGALFNLYKVVRYYRNRGKPLEDIELSLVQHRSRLDDIRDIAALMQAEGQARNAYYAAFDKILEKPDFAFEQRSRRPPRNRINALISFGNSLLYTAVLSEIYRTHLDPRIGFLHATNFRRFTLNLDVAEVFKPALVDRVIFTLVSKDQIKASDFNEELNGLYLNDRGRRVFLEAWEKRLKSTFYHRGLKRNITYRRAIRLELYKLEKHFMDEKAYIPFRLRW
>NZ_AP019796.1|WP_161541078.1|1678518_1679034_+|CRISPR-associated-protein-Cas4
MPDRITGTLVWYAMICEREVWLMAHELEPDRDDARLEWGRFLGQMSYPRSRKREINLPGMKLDIVERHGARIVVGEIKSSSRFVEATRMQMLFYLWRLRESGVEAEGELRFPQERRRMRIVLDASAEADLLRVIERVRAIMQQPFPPPAKRITYCRSCAYREFCWSDDPEE
>NZ_AP019796.1|WP_161541077.1|1676009_1678493_+|CRISPR-associated-helicase-Cas3'
MASGLYSHPGIPLEDHSNRVLALARKLLDETAPAWWKDARLRLLLEMAIALHDFGKATSFFQVALEGKRRTDAFSRHARLSALFFLHRATTWLGEDAEIHWLPLLFAYLVVLRHHTNLKSVADELHPPDEKEMDVLKCQIQAIPVQNVNAYLQALDVPDCIRAVLIFSPEAFLAWLREDAPTLLRGWRKQWRCWKQKAQNAEAYWAFLMGFSVLLDADKLEAGARGLLPRREDIPPNAVALYKERVFGPSSVGSLNEMREKAYQEVLAAPLSPDKHLYTLTLPTGMGKTLTGMAAALKLRALVHEKTGYAPRIIYALPFLSIIDQNADTLEQVLAVALGLTGGISASVAFSDHCASETRSDSPVESRLLIKHHHLADVQYRLQAHDGVEELDYATSRLLTEGWHSEIIITTFVQLFDTLLAWRNASARRVNRLHRAILLLDEVQALPALYWPLVRNLLIELAERLGVYVVLMTATQPYLLEDACELVPDPSAYFKSLDRLDVYIRLEPRRLEDFVADFKPEPDKSYLFMVNTIAAAQKLHRLLEETLNEKVAFLSTGVTPGERRKRIRDLKKGRYRFAVSTQLLEAGVDVDFDVVYRDMAPLDSLVQAAGRCNRNLRAGRRGQFHIVYWIDDRDRSYAHWIYDPVLLARTQTHLEKHTHLREPEFLNLLQDYFRDVWETGIPRDVADALWEAVCTLRFDGEKDKACVLKAKEAPGAHLSQFCLIEQQPYKRDVFVQLDERAEAVWSEAKKILLDLRRDHDVWKARERFARIRSCFYQYVISVALKPETAPYWDEDLRIYVVQREVLEHYYDAVIGFKRESEGDAMFA
>NZ_AP019796.1|WP_161541076.1|1675272_1676049_+|type-I-B-CRISPR-associated-protein-Cas5
MKVVAFDLWSDYGHFRRFFTTSSPLTYSFPPPTAVRGIVGAILGKGRDEYLLATSGLAIGVRVLTAVKRVRWGQNFIFTKGTSGQFDPTLLAQRKGNAQGMVRTQVKYEYLRAPRFRLYVGGNSALLEELEALLREHRTHYTVSMGLSELLADFSYVGTYGATALPPGTYELVSVFPVEILDPERGLENVLRSGVKLAKERAPVYLAPDRTPLLYQDVVLEMGGQPVRVTVSEKVYRLDNGDVVYLWPPVSTLIPASR
>NZ_AP019796.1|WP_161541075.1|1674358_1675276_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSTLQNRHEILFLYDVSWANPNGDPMDENKPRIDEETGVNIVTDVRLKRTVRDALMELGYEVFLREERGEDGSRRTKEDIMIYYESDPRKVLEQCIDIRLFGGTFALKGDDQNAFSLTGPVQFKFGRSLHRVKVELIKGTSIMPSAADKRQGTFTEVYVVPYSFIVFYGIANEKAAAATQLTEEDLEAMFKALWVGHKAGTDVITRSKFGHEPRLLVDIVYKPGTLTHMGELDKLVAFRSEKNDEAIRDISDGMLDLSGLVEKMAAYKDKIEKVRLRMDGRLRLVPDVNAALEVPVEPFTWSKEI
>NZ_AP019796.1|WP_161541074.1|1672610_1674362_+|TIGR02556-family-CRISPR-associated-protein
MLYALRTLGEILGGARLHDPVVADRVITLEFDAGGRYLGTSLHQFSAKDVPRYLYKKAKGSNPPTLTPTLLLNRKEIQKSLKNARNAYRKLRKLNRDLPELELLTKEGETLRKMEKGIVCALKNIPEKERVLFTVRIDGQWMGEREDFRSTLRSKFREEGRESAVDGVCAVCGEKTEISGDISPFKFYTIDKPGYVVGGFDKARAYRAFPLCYECRDLIRRGRQHAEENLSFDLAPNIRYLIIPDFILGADVVRQEVLAILTDEREQRQKRLHTLSRREIRRITEDEEEILELLSQEKDVMTFHFLFMSRQQGRETIDLYIQDVYPSRLRALLEAKAAVDRSMRVPREDGTWLEYNFTYATLHRFFSRSDPNRRNSDLLRHLYDLVDQTFRAVPVSTDYLMPFLMLQIRHDVVTPDRRDQGLYRFTILDALAVLLFIWWTTKMEVPMTVPSPTTLEEFLDGLPVLDSELKKGLFLLGALTERLLRVQGKERGSAPFWKVLKGLKMTEADLRGLLPRVRNKLQEYDRFRAGETALFQKAADYLAQTATPWKMSVDELNFYFALGMGLFPRVAQFVYPKKEEVEL
>NZ_AP019796.1|WP_161541073.1|1671775_1672564_+|CRISPR-associated-endoribonuclease-Cas6
MRVDLYLCPAGGRQKVALPVHYNVLLQGVVYSSLNEALARRVHDHGWQVGGRRLKLFTFSRLRGDFRCRSGRLIFYGKIAWTIASPEEEILESLVVHLLRAKVLQIGQAKLELLSVEVPVPPSYRRPICLRALSPITVYSTFETSDGRKKTYYYTPREPEFGRLVLENLRRKIRAWMGEDIPLDGATFRPVRVSNRNLVVARYKDTIIKGWTGIYELDAPESYFRMALDAGLGAKNSQGFGCVEVWAPTKSVSLKEVEAGKR
>NZ_AP019796.1|WP_161541072.1|1671417_1671750_+|hypothetical-protein
MFALEELQEQIAGELLTYAKEILRNHEEMTGVPLGDAEEMYEVLVQNEYPGLLARNAVRARDVDEFIELLEKDPDLIRAAEAAQNAVFYELEDYDRDTMRLVLVLALSLV
>NZ_AP019796.1|WP_161541082.1|1684532_1684784_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019796.1|WP_161541083.1|1685612_1686263_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019796.1|WP_161542391.1|1686520_1687411_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019796.1|WP_161541084.1|1687438_1692709_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019796.1|WP_161541085.1|1692965_1694594_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019796.1|WP_012845294.1|1694593_1695661_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019796.1|WP_161542392.1|1695632_1699028_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019796.1|WP_161541086.1|1699042_1701736_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019796.1|WP_161542393.1|1701808_1704517_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019796.1|WP_161552498.1|1706257_1707913_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSLLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV

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Crispr_ID: NZ_AP019796_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_7

1705337-1706070

TypeIII

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	CRT
TGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGC	PILER-CR

9 spacers

csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1

The CRISPR arrays of NZ_AP019796_7

>merge|NZ_AP019796|7|1705337-1706070|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTGAAGACGGTGAAAGAAATATTTATGGCGCATTACCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACAAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAAGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACATAAGAACTTGCCCTACAACATTGTGAGGGAGACAGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACAAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGTGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGAGAACGTGCCCGGCGCCCGGGCTGCGCCTCGATGACGTGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACCC

>NZ_AP019796|7|4|1705337-1705828|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGTGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGC	AGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTC
GGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGA	GAACGTGCCCGGCGCCCGGGCTGCGCCTCGATGACG


>NZ_AP019796|7|7|1705337-1706068|CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GAGAACGTGCCCGGCGCCCGGGCTGCGCCTCGATGACGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

>NZ_AP019796|7|4|1705337-1706068|CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GAGAACGTGCCCGGCGCCCGGGCTGCGCCTCGATGACGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

>NZ_AP019796|7|5|1705864-1706070|PILER-CR
	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGTGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGC	AGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTC
GGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGA	GAACGTGCCCGGCGCCCGGGCTGCGCCTCGATGACG
TGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|235847
NZ_AP019796.1\|WP_161541082.1\|1684532_1684784_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541089.1\|1708940_1709735_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_AP019796.1\|WP_161541083.1\|1685612_1686263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541088.1\|1707930_1708944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl\|CDD\|187794
NZ_AP019796.1\|WP_012845294.1\|1694593_1695661_-\|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|133475
NZ_AP019796.1\|WP_161541093.1\|1716023_1717811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|275036
NZ_AP019796.1\|WP_161541081.1\|1680353_1680620_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541092.1\|1712483_1713401_-\|histidine-kinase	csx1	cd09741_csx1_CAS-III	gnl\|CDD\|187872
NZ_AP019796.1\|WP_161542392.1\|1695632_1699028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_AP019796.1\|WP_054684809.1\|1714666_1714852_+\|DUF4236-domain-containing-protein	unknown	unknown	gnl\|CDD\|379423
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|379138
NZ_AP019796.1\|WP_161542394.1\|1714974_1716003_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541090.1\|1709751_1710138_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_AP019796.1\|WP_161541091.1\|1710167_1712381_-\|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_AP019796.1\|WP_161541094.1\|1717817_1718636_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019796.1\|WP_161541089.1\|1708940_1709735_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.45553e-85
NZ_AP019796.1\|WP_161541090.1\|1709751_1710138_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	7.0755e-30
NZ_AP019796.1\|WP_161542391.1\|1686520_1687411_-\|serine-hydrolase	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019796.1\|WP_161541091.1\|1710167_1712381_-\|CRISPR-associated-protein-Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.27033e-89
NZ_AP019796.1\|WP_161541085.1\|1692965_1694594_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019796.1\|WP_161541093.1\|1716023_1717811_+\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000296693
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.10785e-26
NZ_AP019796.1\|WP_161541084.1\|1687438_1692709_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019796.1\|WP_161541092.1\|1712483_1713401_-\|histidine-kinase	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	8.70038e-29
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019796.1\|WP_054684809.1\|1714666_1714852_+\|DUF4236-domain-containing-protein	gnl\|CDD\|379423	pfam14020, DUF4236, Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	3.43875e-06
NZ_AP019796.1\|WP_161541088.1\|1707930_1708944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	9.38593e-30

>NZ_AP019796.1|WP_161542393.1|1701808_1704517_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019796.1|WP_161541086.1|1699042_1701736_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019796.1|WP_161542392.1|1695632_1699028_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019796.1|WP_012845294.1|1694593_1695661_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019796.1|WP_161541085.1|1692965_1694594_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019796.1|WP_161541084.1|1687438_1692709_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019796.1|WP_161542391.1|1686520_1687411_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019796.1|WP_161541083.1|1685612_1686263_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019796.1|WP_161541082.1|1684532_1684784_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019796.1|WP_161541081.1|1680353_1680620_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019796.1|WP_161552498.1|1706257_1707913_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSLLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV
>NZ_AP019796.1|WP_161541088.1|1707930_1708944_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MTLQAIYLYPRASFRTPLRSDTLWGLLVVALRVVAGDREADDFIAACEAGQPPVRLSSAFPFVEVSRGDGAPVIRHFFPRPVLPPPPLLEPSRADARTVFEQMKQGKKLRQIRWLPQELFERVLQGELDEAGLQQALQQSGEQKQWPVILTQDNLHTSIDRLTGTTRMENDAGQLFYSHEYYLKRGHGLFFLCEGDVERIAPALRYLHHVGWGGDSSVGKGHFDWALRRLELQVPAKPTHRLLLSLYSPNPEELAHIRRHRDQTFYQLERRQGYAGAHRLPGSAYRKKPLYMFAEGSLMPDPGHPLRGTVHTVMESAGIQVRHSGLALDLPAYLRSS
>NZ_AP019796.1|WP_161541089.1|1708940_1709735_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAGFLGNIVLKGKMECLTGLHIGGSKEKFEIGGVDQPVIRDPATNYPYVPGSSLKGKMRSLLAFALGKAHEDPNFRSFDPDCPLQRVFGTSAEARNIGPSRLIVRDAFPDEETIQMWENLDTELLYTEIKAENGIDRLTSAANPRFPERVVRGSRFNVEFVFGVYEVRDADYFRYIIDGLRLLEHSWLGRSGTRGYGQVKFKLAEPIIVTLNDYLNGGEAYRRANLPHEELTFDLETASFDEGRFESIKQAFRQVAEKLATNQA
>NZ_AP019796.1|WP_161541090.1|1709751_1710138_-|type-III-A-CRISPR-associated-protein-Csm2
MDIPKDLAELEPEAIDRLAHDMGRKYAEKEIKTAQVRNVFAHINRMRTRLRRNRSVSPEIIKRDLVMLKPRLAYAGGRQEKVRPMSEDLRQVVNAVLNSQSFEKALQNFFDLVEGIVAYHKFYGGKDN
>NZ_AP019796.1|WP_161541091.1|1710167_1712381_-|CRISPR-associated-protein-Csm1
MDQGQIAYLSGLLHAVGVLEQLGPQTFRSPAEASLHFTDQVLEACPAFGPHAGAIREAVRAAAEALPAARPSSWLESLLQQVRLPGHPEPAAGRVYPPRPLSEGTVYPVAPEEVGDGREACRNLWQELQAETTRALRGIQDVEAALETLYTLLEKYTAYVPAPDAGARGISLFDYSRVTAALHLCRARAGSEPAVLLVKGDVSGIQSFIYRELRGDATENPAQLLRGRSFFVALLTRTVVRHLQRQFRLPDGCVLYSSGGHFLLLIPNTEAAPQQLDEADRQINQALFEELRGAIQLVQASVPVSIEEVERRPHEALRQLEEALQMAKLRKGWNVLDTLVGQPIEEANQTPKLHRVGQALPYTHYLVEVPGLAANQAPDGVRCALELRGFAVTWLFVEEDRIEAIVGQLGTRRGTVFNIRTPRIPNLPGAMQVGRRFLPAGVYVPMLADDSRPLMFEELAAIESENYPLLGFLRMDVDNLGALFVVGLHAAFGNQPFGLHRTAALSRELDRFFGGQVNALARGHDVYLVYAGGDDLFAVGSWIRVLRFARSIREKLREYCAGNPSVTISAGLSIHKEHFPITVAAETAGEEEDRAKAAGKNRISVFETPVTWERLSVLLDELGEPLLLAVSDETLPDEDRLPRTFLHTLLRYSREVLDEEGRIDLAALARFNHLLHYTFARRGVHARVLETDTQEGESPKMRLARGFLLEGPDRSEWFRTFVIPAAYVLLKTRKQRN
>NZ_AP019796.1|WP_161541092.1|1712483_1713401_-|histidine-kinase
MSVARRQGPVLMATLGEQPQVVTLTLDLLAAQRMEVEELVVFHTAAHYPALRRSLELLDAELRQWPAYRSLTVRRVLLRDEAGRELTDVRTEQEARQVFRILFREVLEVKRQRRPLHFLIAGGRKVMAAYGMAVVQLLGEAGDQVWHLISEGELLASGRMHPEPGDRVHLVPVPFVRWSALPPAATRLAVTGDPFEAMRLHEAWLDEESRRQRAWFLLHELTPAERTLLVALARTGASNSELARMLKRSPKTVANQLATVADKYRAFAGLAEGVPLSRAELVAHFAPVLDRIGEPCREESLQTFG
>NZ_AP019796.1|WP_054684809.1|1714666_1714852_+|DUF4236-domain-containing-protein
MPLHLYRTFRLGPVRLTISHRGIGLSIGTRGLRIGRTPSGRPYIRLGRGRWRLEKRLPERP
>NZ_AP019796.1|WP_161542394.1|1714974_1716003_+|hypothetical-protein
MRHPATEASTEAPSSILTEAPDWIADDGLLRDEGVIVGRALGTDPLSENNGPHFWKLETIRAYYDERRAPLKAQLEAIRRQLTRLQHREAELREELVRHERALAALAEVETRLPLTGRNLLLAAILTVVCALTPFVVAELLPSERFEHPLAVAMALSLLGLFALFQGRSLLVAADARLSGAPMRPERWKLYAMELLPPLAVALLVAALAHRSEEGWLPTLVIGFALLLLLLIPGRLLMSLLARTLPELSGWWRMASHRWRLRRHHRRAAAALRRDLEKLTRLRMQLEDETIPLLERKLAFLDARCRRKEALFRSEMELARQRNLLRARYESNGQQHSPEISL
>NZ_AP019796.1|WP_161541093.1|1716023_1717811_+|hypothetical-protein
MLQIFRRKSHPEASSPADNILMLPVGAEEPDPNRPHLYGQYDGGLAVENDAFAEFLQAASRREHLAERITALLEQRHQIQEQLRQAEAAHISAQTLPERLQALERALPEARQRHEQLRQQREACEKELETLHQSHEAYSLVQMLMYGTAGLAFLLGDIIVSKEIVAQVLYLPLEYERWLFAVGLACITFVLKVAYDRLVELPFWQRVQKRFEVVILSISTLALITLIFMGALRTQEIQRQHMLRSTEQTTWSLEADAPSIQQEIPGPDGTVLLVTFMLAAVMFATAGAVCFSTAHTHARGYFHRYRPLRQKCARLSDQEREAALRLETLEENLTRGREELARATATLALVGTPEVLRQDLQKLEDRIAQLQDQLADLLVAQRQASYRSGRERALHYQRLLASQSSKEETDELPDASSEQEEHEEAADALPEATAAQEMSEKEADALIEMLTAQDNQEDATSTLPEVSVAQNDREDLHEAEAATDELPGERSESREATPESLPGEHEAAQPVALTVAHSDAAPEDSEAFQTGSNGAASPMPIGSSVTSDVEGESAAVGGDGAERSTERRSRRERGVRHGLRRPFLDIRDEILDLTA
>NZ_AP019796.1|WP_161541094.1|1717817_1718636_+|hypothetical-protein
MRWFCLFFLIATLGCSSEAQRDPLTACADENLAHESLTGIPRTALVFIDRSSSVTASPDTRRAFEAALRQQVEAILPVRGGTIQVFFVHSRTTGKADARTFVQDAPLPRVSPYDSEQRQACRQYVSEVQYRMRAARDSLLRLLDEQVTTSVTEATDLWGIFEVISETLPASNEMPPATVLVLSDLLECMPGPERRCFESRPPTSRAQAEAWAREDAERIQRSYRIRPEVLRQAHYVLISGDFANREESRYVRYYWFALLEAFGVPYEQISIQ

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Crispr_ID: NZ_AP019796_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_8

1713542-1714377

TypeIII

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

10 spacers

csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,Cas14u_CAS-V,csx20

The CRISPR arrays of NZ_AP019796_8

>merge|NZ_AP019796|8|1713542-1714377|CRISPRCasFinder,CRT,PILER-CR
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGAACGCGGACTCCAAAAAGTTGCCTACACGAAGTAATGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTCAGCGAAAACTGAGCGGTGAAATCGTATGACGTCACGCGCTGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTTCGCTAAGAGCGAGCGTTGTTTGGCTGTTGGGGTAGCATAAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCATTATCGACAGCAATTCTGAACCACCGTGTGCAGTGGTGGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|8|8|1713542-1714377|CRISPRCasFinder
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGAACGCGGACTCCAAAAAGTTGCCTACACGAAGTAATGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCAGCGAAAACTGAGCGGTGAAATCGTATGACGTCACGCGCTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCGCTAAGAGCGAGCGTTGTTTGGCTGTTGGGGTAGCATAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCATTATCGACAGCAATTCTGAACCACCGTGTGCAGTGGTGGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|8|5|1713542-1714377|CRT
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGAACGCGGACTCCAAAAAGTTGCCTACACGAAGTAATGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCAGCGAAAACTGAGCGGTGAAATCGTATGACGTCACGCGCTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCGCTAAGAGCGAGCGTTGTTTGGCTGTTGGGGTAGCATAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCATTATCGACAGCAATTCTGAACCACCGTGTGCAGTGGTGGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|8|6|1713865-1714377|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGAACGCGGACTCCAAAAAGTTGCCTACACGAAGTAATGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCAGCGAAAACTGAGCGGTGAAATCGTATGACGTCACGCGCTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCGCTAAGAGCGAGCGTTGTTTGGCTGTTGGGGTAGCATAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCATTATCGACAGCAATTCTGAACCACCGTGTGCAGTGGTGGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|235847
NZ_AP019796.1\|WP_161541097.1\|1721073_1721466_+\|CRISPR-associated-protein	csx20	cls000118_csx20_CAS-I:CAS-III	unknown
NZ_AP019796.1\|WP_161541089.1\|1708940_1709735_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl\|CDD\|187815
NZ_AP019796.1\|WP_161541090.1\|1709751_1710138_-\|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl\|CDD\|367635
NZ_AP019796.1\|WP_161541098.1\|1721578_1721977_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541091.1\|1710167_1712381_-\|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	gnl\|CDD\|187811
NZ_AP019796.1\|WP_161542394.1\|1714974_1716003_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541093.1\|1716023_1717811_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl\|CDD\|187793
NZ_AP019796.1\|WP_161541092.1\|1712483_1713401_-\|histidine-kinase	csx1	cd09741_csx1_CAS-III	gnl\|CDD\|187872
NZ_AP019796.1\|WP_161541099.1\|1721980_1722346_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161542392.1\|1695632_1699028_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl\|CDD\|238657
NZ_AP019796.1\|WP_054684809.1\|1714666_1714852_+\|DUF4236-domain-containing-protein	unknown	unknown	gnl\|CDD\|379423
NZ_AP019796.1\|WP_161541096.1\|1719538_1720687_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14u_CAS-V	-	gnl\|CDD\|223747
NZ_AP019796.1\|WP_161541088.1\|1707930_1708944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl\|CDD\|187794
NZ_AP019796.1\|WP_161541095.1\|1718639_1719488_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|378186
NZ_AP019796.1\|WP_012845294.1\|1694593_1695661_-\|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541094.1\|1717817_1718636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541100.1\|1722399_1723584_+\|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	gnl\|CDD\|187817

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161542393.1\|1701808_1704517_-\|VCBS-repeat-containing-protein	gnl\|CDD\|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019796.1\|WP_161541089.1\|1708940_1709735_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl\|CDD\|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.45553e-85
NZ_AP019796.1\|WP_161541090.1\|1709751_1710138_-\|type-III-A-CRISPR-associated-protein-Csm2	gnl\|CDD\|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	7.0755e-30
NZ_AP019796.1\|WP_161541091.1\|1710167_1712381_-\|CRISPR-associated-protein-Csm1	gnl\|CDD\|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.27033e-89
NZ_AP019796.1\|WP_161541100.1\|1722399_1723584_+\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187817	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.42628e-39
NZ_AP019796.1\|WP_161541093.1\|1716023_1717811_+\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000296693
NZ_AP019796.1\|WP_161552498.1\|1706257_1707913_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl\|CDD\|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.10785e-26
NZ_AP019796.1\|WP_161541092.1\|1712483_1713401_-\|histidine-kinase	gnl\|CDD\|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	8.70038e-29
NZ_AP019796.1\|WP_161541086.1\|1699042_1701736_-\|carboxypeptidase-like-regulatory-domain-containing-protein	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019796.1\|WP_054684809.1\|1714666_1714852_+\|DUF4236-domain-containing-protein	gnl\|CDD\|379423	pfam14020, DUF4236, Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	3.43875e-06
NZ_AP019796.1\|WP_161541096.1\|1719538_1720687_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.0653e-35
NZ_AP019796.1\|WP_161541088.1\|1707930_1708944_-\|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl\|CDD\|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	9.38593e-30
NZ_AP019796.1\|WP_161541095.1\|1718639_1719488_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	4.66477e-76

>NZ_AP019796.1|WP_161541092.1|1712483_1713401_-|histidine-kinase
MSVARRQGPVLMATLGEQPQVVTLTLDLLAAQRMEVEELVVFHTAAHYPALRRSLELLDAELRQWPAYRSLTVRRVLLRDEAGRELTDVRTEQEARQVFRILFREVLEVKRQRRPLHFLIAGGRKVMAAYGMAVVQLLGEAGDQVWHLISEGELLASGRMHPEPGDRVHLVPVPFVRWSALPPAATRLAVTGDPFEAMRLHEAWLDEESRRQRAWFLLHELTPAERTLLVALARTGASNSELARMLKRSPKTVANQLATVADKYRAFAGLAEGVPLSRAELVAHFAPVLDRIGEPCREESLQTFG
>NZ_AP019796.1|WP_161541091.1|1710167_1712381_-|CRISPR-associated-protein-Csm1
MDQGQIAYLSGLLHAVGVLEQLGPQTFRSPAEASLHFTDQVLEACPAFGPHAGAIREAVRAAAEALPAARPSSWLESLLQQVRLPGHPEPAAGRVYPPRPLSEGTVYPVAPEEVGDGREACRNLWQELQAETTRALRGIQDVEAALETLYTLLEKYTAYVPAPDAGARGISLFDYSRVTAALHLCRARAGSEPAVLLVKGDVSGIQSFIYRELRGDATENPAQLLRGRSFFVALLTRTVVRHLQRQFRLPDGCVLYSSGGHFLLLIPNTEAAPQQLDEADRQINQALFEELRGAIQLVQASVPVSIEEVERRPHEALRQLEEALQMAKLRKGWNVLDTLVGQPIEEANQTPKLHRVGQALPYTHYLVEVPGLAANQAPDGVRCALELRGFAVTWLFVEEDRIEAIVGQLGTRRGTVFNIRTPRIPNLPGAMQVGRRFLPAGVYVPMLADDSRPLMFEELAAIESENYPLLGFLRMDVDNLGALFVVGLHAAFGNQPFGLHRTAALSRELDRFFGGQVNALARGHDVYLVYAGGDDLFAVGSWIRVLRFARSIREKLREYCAGNPSVTISAGLSIHKEHFPITVAAETAGEEEDRAKAAGKNRISVFETPVTWERLSVLLDELGEPLLLAVSDETLPDEDRLPRTFLHTLLRYSREVLDEEGRIDLAALARFNHLLHYTFARRGVHARVLETDTQEGESPKMRLARGFLLEGPDRSEWFRTFVIPAAYVLLKTRKQRN
>NZ_AP019796.1|WP_161541090.1|1709751_1710138_-|type-III-A-CRISPR-associated-protein-Csm2
MDIPKDLAELEPEAIDRLAHDMGRKYAEKEIKTAQVRNVFAHINRMRTRLRRNRSVSPEIIKRDLVMLKPRLAYAGGRQEKVRPMSEDLRQVVNAVLNSQSFEKALQNFFDLVEGIVAYHKFYGGKDN
>NZ_AP019796.1|WP_161541089.1|1708940_1709735_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAGFLGNIVLKGKMECLTGLHIGGSKEKFEIGGVDQPVIRDPATNYPYVPGSSLKGKMRSLLAFALGKAHEDPNFRSFDPDCPLQRVFGTSAEARNIGPSRLIVRDAFPDEETIQMWENLDTELLYTEIKAENGIDRLTSAANPRFPERVVRGSRFNVEFVFGVYEVRDADYFRYIIDGLRLLEHSWLGRSGTRGYGQVKFKLAEPIIVTLNDYLNGGEAYRRANLPHEELTFDLETASFDEGRFESIKQAFRQVAEKLATNQA
>NZ_AP019796.1|WP_161541088.1|1707930_1708944_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MTLQAIYLYPRASFRTPLRSDTLWGLLVVALRVVAGDREADDFIAACEAGQPPVRLSSAFPFVEVSRGDGAPVIRHFFPRPVLPPPPLLEPSRADARTVFEQMKQGKKLRQIRWLPQELFERVLQGELDEAGLQQALQQSGEQKQWPVILTQDNLHTSIDRLTGTTRMENDAGQLFYSHEYYLKRGHGLFFLCEGDVERIAPALRYLHHVGWGGDSSVGKGHFDWALRRLELQVPAKPTHRLLLSLYSPNPEELAHIRRHRDQTFYQLERRQGYAGAHRLPGSAYRKKPLYMFAEGSLMPDPGHPLRGTVHTVMESAGIQVRHSGLALDLPAYLRSS
>NZ_AP019796.1|WP_161552498.1|1706257_1707913_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSLLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV
>NZ_AP019796.1|WP_161542393.1|1701808_1704517_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019796.1|WP_161541086.1|1699042_1701736_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019796.1|WP_161542392.1|1695632_1699028_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019796.1|WP_012845294.1|1694593_1695661_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019796.1|WP_054684809.1|1714666_1714852_+|DUF4236-domain-containing-protein
MPLHLYRTFRLGPVRLTISHRGIGLSIGTRGLRIGRTPSGRPYIRLGRGRWRLEKRLPERP
>NZ_AP019796.1|WP_161542394.1|1714974_1716003_+|hypothetical-protein
MRHPATEASTEAPSSILTEAPDWIADDGLLRDEGVIVGRALGTDPLSENNGPHFWKLETIRAYYDERRAPLKAQLEAIRRQLTRLQHREAELREELVRHERALAALAEVETRLPLTGRNLLLAAILTVVCALTPFVVAELLPSERFEHPLAVAMALSLLGLFALFQGRSLLVAADARLSGAPMRPERWKLYAMELLPPLAVALLVAALAHRSEEGWLPTLVIGFALLLLLLIPGRLLMSLLARTLPELSGWWRMASHRWRLRRHHRRAAAALRRDLEKLTRLRMQLEDETIPLLERKLAFLDARCRRKEALFRSEMELARQRNLLRARYESNGQQHSPEISL
>NZ_AP019796.1|WP_161541093.1|1716023_1717811_+|hypothetical-protein
MLQIFRRKSHPEASSPADNILMLPVGAEEPDPNRPHLYGQYDGGLAVENDAFAEFLQAASRREHLAERITALLEQRHQIQEQLRQAEAAHISAQTLPERLQALERALPEARQRHEQLRQQREACEKELETLHQSHEAYSLVQMLMYGTAGLAFLLGDIIVSKEIVAQVLYLPLEYERWLFAVGLACITFVLKVAYDRLVELPFWQRVQKRFEVVILSISTLALITLIFMGALRTQEIQRQHMLRSTEQTTWSLEADAPSIQQEIPGPDGTVLLVTFMLAAVMFATAGAVCFSTAHTHARGYFHRYRPLRQKCARLSDQEREAALRLETLEENLTRGREELARATATLALVGTPEVLRQDLQKLEDRIAQLQDQLADLLVAQRQASYRSGRERALHYQRLLASQSSKEETDELPDASSEQEEHEEAADALPEATAAQEMSEKEADALIEMLTAQDNQEDATSTLPEVSVAQNDREDLHEAEAATDELPGERSESREATPESLPGEHEAAQPVALTVAHSDAAPEDSEAFQTGSNGAASPMPIGSSVTSDVEGESAAVGGDGAERSTERRSRRERGVRHGLRRPFLDIRDEILDLTA
>NZ_AP019796.1|WP_161541094.1|1717817_1718636_+|hypothetical-protein
MRWFCLFFLIATLGCSSEAQRDPLTACADENLAHESLTGIPRTALVFIDRSSSVTASPDTRRAFEAALRQQVEAILPVRGGTIQVFFVHSRTTGKADARTFVQDAPLPRVSPYDSEQRQACRQYVSEVQYRMRAARDSLLRLLDEQVTTSVTEATDLWGIFEVISETLPASNEMPPATVLVLSDLLECMPGPERRCFESRPPTSRAQAEAWAREDAERIQRSYRIRPEVLRQAHYVLISGDFANREESRYVRYYWFALLEAFGVPYEQISIQ
>NZ_AP019796.1|WP_161541095.1|1718639_1719488_+|TIGR02221-family-CRISPR-associated-protein
MRVQLSFIGTGKYQPCIYVWNDQRCETPYFQEAAFQFFEPEDCLVLMTEEAERIHGQALSARIAYQPIRIPDGRTEDELWEIFSTLTEHVPQDATLIVDVTHGFRTQPMLALAALYYLRVTRNVEIERIVYGAFEAHNPETNEAPVFDLTPFLTLIDWSVAAHQFMRYGQAEDLARLIREIHRRTHVERAGVQARHAAPAASWLQGFARGLALARVTEVMTKHACCLPEALEQVRQEVNRIARLRPFELLLDQTAERVRLLYHDNRARKPTASAVGGIAPCP
>NZ_AP019796.1|WP_161541096.1|1719538_1720687_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQTLTLRTRLDPTPEQAAALEETLERFAQACNLTLEVARACRTFSKFKLQRLVYGQLRALGLSANLAIRAIARVSHRKGHCAKHYRPTSCDYDQRTLSLRGQTVSLSTTRGRLRIPMRLSPYHRYWLARARSVQGGRLLRDRRGRWYVHLTVRVAVPEALPTGRVVGVDLGQRLLAALSTGECLSGGALKTKRLHYRAKRAEIRSKLDRPSERTRSLRRLWARLSGRERRFVRQVLHEASRRIVDGLAAGDVLAIEDLRGLRGRTIRRGRTDRHLHHLWPYALFRRLLEYKARLKGVRVVVVDPAHTSQTCPRCGHVDRRNRRSGRLFRCRACGFQHNADVVAALNLARRAGSEGMGRCQPAPGAIPAGGREGKPTTSVVGS
>NZ_AP019796.1|WP_161541097.1|1721073_1721466_+|CRISPR-associated-protein
MLINLSNHPASTWGEAQRAAARIYGEIEDWKFPLIPPEWDESQVADLAKTYAERIVRRLNEAGKGCHAVHVMGEMTFTCTLVRLLHQRGILCLASTSQRMVEEDPASGKKIAYFRFERFRPYPCLQALSF
>NZ_AP019796.1|WP_161541098.1|1721578_1721977_+|hypothetical-protein
MRTTHNLILYITDMEPDDLRTAERLIEAFEEELGCVLEYDPEHRMLSLYTAMVVEPAEASGAALRQMLHCVYHLVGRFLQEYRLIFSVSTSSGASGSRPLGTILERSPYDRLLSQLITPEYPRLLPPEPPLC
>NZ_AP019796.1|WP_161541099.1|1721980_1722346_+|hypothetical-protein
MRVWFTNFFAREVPCTLEISVTLEGGEHPPQLVDFLRKRADRLWTNPDGSMLAVFIREFRLESLQQRLPRFLRALELRLLRLGACRGTLAWRPAFAYNWSLEGWGCSREQALEHLLRLQRN
>NZ_AP019796.1|WP_161541100.1|1722399_1723584_+|TIGR02584-family-CRISPR-associated-protein
MERYNLLIALGISPAVLTETIWTLAVEHPQPAIPAEIHVVTTLTGERTLRNRLFDTPDEEGLSVWARFCREVLQLDPEAPEAPRFHIHVPLRGNGLKLDDIRTWDDDRRYAELCYRVVAQLCADPDAPRVVASIAGGRKTMSAHLLTAFSLYARPRDESIHVLVHPERPVLEDPTFFYPRPGSGMDVRIERVDLHLVRFRNQLEELARLHRGGQLPRTLQELESLPGLGLRPARPALVEVVLGDRTERSLRLLDAEGNEMAALKPVAPLPLVTLITLYEMLRRADSPEISNLQLVENEQVEALRNAAYAFCRDLAQLRPWGDTIALSRSISELNQLLAGNPLCNRYLRIHSRRTWDETFYAFGTEPPALRVCVPRALDYIQNWPFQHVPLTYID

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Crispr_ID: NZ_AP019796_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_9

1730758-1731513

Unclear

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

9 spacers

cas1,cas2,cas6,csx1

The CRISPR arrays of NZ_AP019796_9

>merge|NZ_AP019796|9|1730758-1731513|CRISPRCasFinder,CRT,PILER-CR
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGGTTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGAATGGTATGTGCCGGGCTTGCCATGATCTATCTTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTCAATCATCTGGTCTCCGCCGTGGCTCAGCAACCGGTCCGCCGGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|9|9|1730758-1731513|CRISPRCasFinder
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGG	TTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCAATCATCTGGTCTCCGCCGTGGCTCAGCAACCGGTCCGCCGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|9|6|1730758-1731513|CRT
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGG	TTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCAATCATCTGGTCTCCGCCGTGGCTCAGCAACCGGTCCGCCGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|9|7|1730837-1731513|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCAATCATCTGGTCTCCGCCGTGGCTCAGCAACCGGTCCGCCGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161541104.1\|1726860_1727142_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP019796.1\|WP_162556495.1\|1744820_1745036_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541108.1\|1730034_1730631_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|377317
NZ_AP019796.1\|WP_161541107.1\|1729549_1730032_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|377317
NZ_AP019796.1\|WP_161541117.1\|1744090_1744633_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_AP019796.1\|WP_161541115.1\|1739320_1740862_-\|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	gnl\|CDD\|187878
NZ_AP019796.1\|WP_161541111.1\|1732745_1733102_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_AP019796.1\|WP_161541101.1\|1723590_1724934_+\|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl\|CDD\|187863
NZ_AP019796.1\|WP_161541100.1\|1722399_1723584_+\|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	gnl\|CDD\|187817
NZ_AP019796.1\|WP_161541109.1\|1731731_1732106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541110.1\|1732166_1732487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541114.1\|1735612_1737094_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541113.1\|1733567_1735604_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350691
NZ_AP019796.1\|WP_161541116.1\|1741029_1744125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541099.1\|1721980_1722346_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541102.1\|1724919_1725909_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl\|CDD\|337605
NZ_AP019796.1\|WP_161541103.1\|1725970_1726846_-\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|99751
NZ_AP019796.1\|WP_161541112.1\|1733109_1733379_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236966
NZ_AP019796.1\|WP_161541105.1\|1727142_1728720_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP019796.1\|WP_161541106.1\|1728827_1729553_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161541104.1\|1726860_1727142_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.2599e-23
NZ_AP019796.1\|WP_161541108.1\|1730034_1730631_-\|DUF488-family-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	1.98834e-21
NZ_AP019796.1\|WP_161541107.1\|1729549_1730032_-\|DUF488-family-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	3.30234e-13
NZ_AP019796.1\|WP_161541117.1\|1744090_1744633_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000214258
NZ_AP019796.1\|WP_161541115.1\|1739320_1740862_-\|TIGR02710-family-CRISPR-associated-protein	gnl\|CDD\|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	4.9115e-35
NZ_AP019796.1\|WP_161541111.1\|1732745_1733102_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	1.25878e-06
NZ_AP019796.1\|WP_161541101.1\|1723590_1724934_+\|TIGR02221-family-CRISPR-associated-protein	gnl\|CDD\|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	2.14598e-42
NZ_AP019796.1\|WP_161541100.1\|1722399_1723584_+\|TIGR02584-family-CRISPR-associated-protein	gnl\|CDD\|187817	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.42628e-39
NZ_AP019796.1\|WP_161541105.1\|1727142_1728720_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.60625e-122
NZ_AP019796.1\|WP_161541102.1\|1724919_1725909_-\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl\|CDD\|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	8.46303e-07
NZ_AP019796.1\|WP_161541103.1\|1725970_1726846_-\|DnaJ-domain-containing-protein	gnl\|CDD\|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	4.17577e-08
NZ_AP019796.1\|WP_161541112.1\|1733109_1733379_-\|hypothetical-protein	gnl\|CDD\|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0.00322704
NZ_AP019796.1\|WP_161541113.1\|1733567_1735604_+\|AAA-family-ATPase	gnl\|CDD\|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.27887e-33

>NZ_AP019796.1|WP_161541108.1|1730034_1730631_-|DUF488-family-protein
MNEVQPLFTVGYGTSSIEEFINVLKQYEIKCIVDIRSNPYSKFNPDFSIGTLKNHLEKNGIAYEYMGDTLGGKPTDESCLENDKPIFSVIKEKDFFKEGIRKLLSLWRYYQPQRIALMCACQYPDKCHRSKLVGQYIYETRSDNDIRIIHIYKDKNGEYKVIEQDKVILKIVSGQLNLFGFDFESKIAVSGKKIKKDA
>NZ_AP019796.1|WP_161541107.1|1729549_1730032_-|DUF488-family-protein
MIEQIFTIGVYGRDEDSFFDTLQQNKIDTFCDIRQRRGVRGREYKFVNKNYLCQKLDKLGIRYVYLKELAPPREVRAIQRAVDQKKSILKRQRTLLSHAFIEAYKQACLSKISPVDIFAKLPVDSKRIVFFCVEKDPRACHRSILTDWIEQKENIPVVHL
>NZ_AP019796.1|WP_161541106.1|1728827_1729553_-|hypothetical-protein
MNKIKVLIVARTRTNNDQMRCIGGLAWEENEAQCYSVRLMNPRDLYRGRIIRRGFKGFWDTSAPYRIGDVWELTVRELEQKIPPHVEDVIVEDAILLKKIRVSEMYDRILYMLQKSRLPILWRGDPNNLFDGKIQFNKNGKGYIDKNNVSKCSTGFWLPDKNLYKSYDSNNKLCYRYKADNNRLYYIPYVGVFSKTPPVIKEGSLIRVSLSRWHRETEMCWLMISGWFEPPHPRLSCDLYG
>NZ_AP019796.1|WP_161541105.1|1727142_1728720_-|CRISPR-associated-endonuclease-Cas1
MQAPYEGPCWPVAWVYEFAYCLRRGYYAWVEGPGEPVALSSGEGTWMAADGWCGPVQFIRDGHGSPVPVIRLAHVAESDTAERPEHLMLAALARLIEAETGQSVARGIVQYGPTGRQEVVTLDERLRAAWQRLDAEIRAVIHEGRLPAPRADQRCPACPRLEVCNPSGAAETAAQLNVLPPVRQARTLYVDEIGAVVRRDGRQLVVTVSRNGTRRELLRLPALLVDQVVLVGPVQITSQALRLLLRQNVDIVYLSTEGRFEGRLATEFHPHVALRLAQYEAARDPQRALPLARQFVRGKLQNMARLLRHYAQDYRNSTLEATAAAIESDLQHLSELKSPDAVRGLEGAATRRYFSVFNEMLRPEAHEPIDWPVFPGRNRRPPTDPVNATLGYLYALLLGNLVTACAVAGLDPYVGYLHTPAYGRPSLALDLMEEFRAPIADRLTLHLFNRGKLRPRHFEERSGGVYLNEEGRAVVLAAWQEWRQQVSRHPVLGLEMSQMRHFEAQARLLARTLQEPGAEYTPFVA
>NZ_AP019796.1|WP_161541104.1|1726860_1727142_-|CRISPR-associated-endonuclease-Cas2
MAFWLIGYDIADPRRLQRVARLLEDYGQRLQYSVFLCRLEAEAIRQLRRGLLRIVDLEEDRLFFLRLCQGCIEALEQIGQGKGVDLRQNHWIV
>NZ_AP019796.1|WP_161541103.1|1725970_1726846_-|DnaJ-domain-containing-protein
MDQFERVSTLIERGNYEAAFLLLGDSVDLALRELEADRRARRNGTILGIGLSLLTGGLGLEDLIIGPLAYKAARFFGGGTMKPEEAGALLWEALNLRLLMIKHFAEIVITAENPARILRDLLVVYFIAKESFERFDELLPVLIAPTQEKNLHRIVSQLEAEVGDERTHDFDTILFICLLLYGLQHWNLYQKLRTGREALEQEIEEILREERYGASEAGADLDRALERHYAAVLELEAPYTPEKVRRNYRRLIKTCHPDRMQQASAAERRQAEERARELNEAYEYFRARLNF
>NZ_AP019796.1|WP_161541102.1|1724919_1725909_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MYETLLQSSGLARLRWSVVRFELEAVSPIDLGDLPASTVRGALGAALRRMVCITRLPTCTDCPFRWPCVYGYLFETPPPPDGRFLRGLQDVPRPYVVRRPGLEERRFAPGERLTVELLLVGRARMYLPYLTLALVRLEESGLGRGRRDGGGRFRLVAAQALRPDGSLQQVYDAGARQVLADVPEWTAAELLAGESPASTVLLRAPVPLRLKAQGRLVRRLTYRILLRSVLGRLSSLAAFHAETELQLDYADLLRRAEAVRVREDRMQWRDDLQRYSGRQRTTMRQGGLVGEIVFEGVPPETWPMLRLGAALHVGHSTVMGLGAYELRPL
>NZ_AP019796.1|WP_161541101.1|1723590_1724934_+|TIGR02221-family-CRISPR-associated-protein
MSEKLLTFLGVGDRNRQLEAQLQDREYQRVRYFLPDAPDKEIETPFVGQAILELHPDRFSQVVILGTVDSMWDTLLIHFLSDTQTEAEIELYTELFEAIEHKREAEVENLLPRLTRVLEKRWRPGLQLKLIPVGRTQEELWQIFETLTGLKPSNTTLSIDITHGLRYQPFFLLLALQYFHLTRPNVRLGSVFYGALELHDYYEGRAPLFDLRPMLELMQWSLAAQAFVQYQDPEPLLGLLRDPRQERLRHELRQFARQINLNLFNDFRNRAQKLSHQLRGLSQREENMPAPFRLVEPFLVDFCETFAGAQSDWEALLRLARRHLKYRRPALAVLAAYEAVVHRLCEIYGVRPAAKNSRGKRYSSELIQALKRGSIISRALPELKELIKAVNELQEIRNNTAHFRTDSEGPDPGYRLTKIKTLLTILEEKLGHPTLEQLPHLYPLERP
>NZ_AP019796.1|WP_161541100.1|1722399_1723584_+|TIGR02584-family-CRISPR-associated-protein
MERYNLLIALGISPAVLTETIWTLAVEHPQPAIPAEIHVVTTLTGERTLRNRLFDTPDEEGLSVWARFCREVLQLDPEAPEAPRFHIHVPLRGNGLKLDDIRTWDDDRRYAELCYRVVAQLCADPDAPRVVASIAGGRKTMSAHLLTAFSLYARPRDESIHVLVHPERPVLEDPTFFYPRPGSGMDVRIERVDLHLVRFRNQLEELARLHRGGQLPRTLQELESLPGLGLRPARPALVEVVLGDRTERSLRLLDAEGNEMAALKPVAPLPLVTLITLYEMLRRADSPEISNLQLVENEQVEALRNAAYAFCRDLAQLRPWGDTIALSRSISELNQLLAGNPLCNRYLRIHSRRTWDETFYAFGTEPPALRVCVPRALDYIQNWPFQHVPLTYID
>NZ_AP019796.1|WP_161541099.1|1721980_1722346_+|hypothetical-protein
MRVWFTNFFAREVPCTLEISVTLEGGEHPPQLVDFLRKRADRLWTNPDGSMLAVFIREFRLESLQQRLPRFLRALELRLLRLGACRGTLAWRPAFAYNWSLEGWGCSREQALEHLLRLQRN
>NZ_AP019796.1|WP_161541109.1|1731731_1732106_-|hypothetical-protein
MACPVLLEFLLYIEGENDLEKDLEGLRQRLPEAEVNAWPGAFDLEVSCLIEVEAERIYDEVERICETIKSWARSHLNGREPYGSISWKVPRMLVGRMRIRYEEAREFMNRRRERICAQVQQLCN
>NZ_AP019796.1|WP_161541110.1|1732166_1732487_-|hypothetical-protein
MRTSYRFMLHYRGSNPELMPALIRALSQMGYGPVTGPAFIWTFEQPQLDQVLKKLQLRICRELARSGAPGEEVTVSYGPAAVAAGRVDLFGEELSPDLEGWPELSR
>NZ_AP019796.1|WP_161541111.1|1732745_1733102_-|single-stranded-DNA-binding-protein
MEPLQPKRTVNRVILLGRLAAPPEPVSEAGNVCQMVLTTQEQAIGPTGEPAVRLEPHLLQVEDAALRDFCLRHLTVGQILYVEGMLRRNEWPERNAMPVVVLVRKLLVASWDAGEPSA
>NZ_AP019796.1|WP_161541112.1|1733109_1733379_-|hypothetical-protein
MNDFWYEEDFEFDDEFEGDPESGDYEGFQDLPDARDWEEDWDDEWDDWDDELDDGLATCDICGAPVGRYGYDDGYMTLCEDCRDQMYGD
>NZ_AP019796.1|WP_161541113.1|1733567_1735604_+|AAA-family-ATPase
MVELSGEQQRILDQLLAWLDRPEAPPIFILTGSAGTGKTLLIRHLVQALHQRRIKYALAAPTGRAARLLADRTGEDARTLHSLIYILDRYQLIEEAEAQAEDPLSLRLHFALRSAELDARLIIVDEASMVGDVVGEQELYRFGSGRLLLDLLSYARLMPRRAGEVSSRLLFVGDPAQLPPVGQSISPALSAEYLRETFGLSAETAHLQTVFRQRKGHPILEAATALRNALENNRFHTFQLPAQPPDLRPVGIEEAIQIAAQDFERQTPSVLLCRTNALARKLNEAVRALLWGKESLPLQPGDLLLVNRNAPLYSLFNGDLVLVETVGPLEHRRVGRRGRPPVDLYFRDVILRYPHDNPRRRITCKLLENLLESPDGQLSPDLIQALLIDFYLRNRTLKPGSPEFHLELARDPYFNALHVRYGYAMTVHKAQGGEWRRAAVVFTDWKHFRHADFFRWAYTAITRAREELLTIDAPAFEAFSEMRWQPAASVPAAEQTAGSAARFPLKALETYHRRLTEALSAEGIETTDVELLQYAVRYHLSREDRTTRIQYYYRGNGQVSRIVTLGGADDPELTQQAYALFERILSEPPPASDELPENPLLREFLERARHRLEGSGIRIVNWKEMPYALRLYFSADGENATIDFYYNRRGVWTHAQQVGRSSSGSLFARIQLLLQSDG
>NZ_AP019796.1|WP_161541114.1|1735612_1737094_+|hypothetical-protein
MTTAISTEELRRFKALCQQKNFGQALPLARRFHPLLVQNVHLARQWGWVIYERLKDLAEQARAKQAPASRQANSLPEHLSRKIREALVEYARLPNLHTPDLLHAMILVMVCRIGIRWSGVLGFLYHVRAFDTLRPEDRLPKTYGDRTYPSIEQLLTQTVAAALAKLPLRDQRPEVLDWACVQVQQRLDRFPDEPWIPYHLACYLIKKQRGPDARPLLAPVLLQHRHKSWIWERVARANHDRPEHRLTALTQALRLAERELPAVRFRLHLELADLLATRQRHDEAAAQLQAARRLEEQLGRNVRDDRNPLWQRYRHMLQQPWFRQRAEQTNLPRTPTLTIEPEAMLYEHLPTTESSGVIIGHNSEKGLTIIRLSPSKIVCVKHRKFPDASRLEPGTVVWLRLVAEQVVALEPRPDHPLPDLVRWFRGRLLQPDGRAFAFVITGDEQRIFIPPRLNRKLNLEADATVEVLAERTIDPTKNTHSWSALKVKPVADQ
>NZ_AP019796.1|WP_161541115.1|1739320_1740862_-|TIGR02710-family-CRISPR-associated-protein
MRVRFLLVRLPFQRSLVLVMQELEGQQRVGVVPVIAPGETFHDEQAYRIFQEVDAGRLPAGAEIVGEFEFPDEEAAQEAARRFAQDLKESLWGEEVAAQEQHAPSRVETVLLLTVGGSPEPLIRAVQRLDPSQSFVCFICSPDSRRLVETAGDAPNIPRAAGLPATHYAVEVWSDPDDLAGCVSALFALHRRIRSRFPEARVVANYTGGTKTMSAALVIGAVLLGWELQLNVGVRRDLRQVLAGTDVPMRVAADDVLLHLELRLLRQALDRYDYVAAAEIVRELLRTLSLSGARRTQVLRLYQIVQGLAAWDVGQYRQALVGFGMAGAHGSAWLPRLRTLAEAQKPGLEAVADLLLAAARRAHQGRYDDAVVRLVRAVELFGTVRLQQAHGIDIRHPDQARLPEVLRAEPAVSRDRWPGSPELSYHMLEALGDPVGQLFARRRSVLREALERCRDSLLLAGSAALDEQEYEAVRNRLEGFLHEAARVVAESLRAPQLPRSEVLEWVELGPAGA
>NZ_AP019796.1|WP_161541116.1|1741029_1744125_+|hypothetical-protein
MRNTCMVVFQAPVDPDRSPQSPPHRIWLHQDVLEFLHGRDASVRRLGIVLRQIAARGRPNRIKSCRTPENRGWLRTPMGGGGSGMHFYLWWAPSDSERVAPLVPSDNEVFLRTIRHHDNHDPLDCGQRHDYILLSLQELQTEHIDGVDCAPWTPEQRAFIDAGEVTRIVLGRPGSGKTASLWRAVERHPARHLLYLTWSRELAWQAHLNFSALAPGRTVRCWHFSRLLRAITQQDEPRLTLTESRRRFREALQLLSARQLGPWKQRLTALHAELRAFLIGRARPGHASTVFHRPVFHLRQEAYAGLRRDDRHPDAIEKAWHVFELLCRNEQLAEIFPELAAASQAIRILRAGRLPTILETIEGIVVDEVQDLTLLELSVVVELWHMLARRRSTPPLLLLAGDEGQTVRPSGFRWGPYKEWLSERIAPPRDYELGESLRCPANIARTFERAARYYSKLPREERPARQRRDTRAAPGGHLIYVAAENQQQATSLIQKLCDEESLVVVSLEDEVPEHIWSPALIKGLERQTVVVLNPGAVLERLDRFVAEEHFAFDREDYRTEVDRLRVALSRSSETLVFLDVAPTAAQRACSLRLLGDDVVEVPPHELLDNLEQAELSLLERIQARLEEFSVRIDDDPVQALRLALRARDLQLRIRSLGEHIPANIAREVPRAILLSIARLLTDDRVLPEVETPDLLQQAREAASELGPEHLRAFDELVRWHQSGRVFPAALLKAACRLTGEAEWLRQALSAIAYSLHAALERSARRPESAGVFLEDVAAWLRFLDYAGNLEEAVRQLRGLAFDALLAAGDLATAQQMLERIQPPDLLRKGRLLEAKNELEEAIEAYLQAGAYTEAERVRQRLYHFRNDTLRRFRHLADQCSALEQIPVLTSMLSGAQQRLATRYIQLHFEARKDASVQNTLYAFLSYLQAVHQHTDQLEDPELMMLGALEELTRRRHRACAAAAQLLFEHYGTRSMARRLLASPAGELPECSEPAVFCLAASTLETLRNCPPYQNLLAFIDHGKPTRRAAES
>NZ_AP019796.1|WP_161541117.1|1744090_1744633_+|hypothetical-protein
MENRHAALLKAEQQIQEIAEELSRLRDATLLLTEAQHGVDQVLRSCQHLNDRVADLFEHLHAAASALQEAGFPELKASLDQMGTDIEKLQARQHEASRQLEALHQTLRYLHESIVQIVNGYNSLQATGERLQTDLESLMLATSQLADRIATIETRQQRSLWMLAVVAGLVLLTLIIMLWP
>NZ_AP019796.1|WP_162556495.1|1744820_1745036_-|hypothetical-protein
MEEAGSAAEVAGAGAVFHFFSSGGFAPGSLMEEESGRLQETLKALQTRVTLVLGTLGLIILLLLLLIFRTG

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Crispr_ID: NZ_AP019796_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_10

1737827-1739136

Unclear

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

16 spacers

cas1,csx1

The CRISPR arrays of NZ_AP019796_10

>merge|NZ_AP019796|10|1737827-1739136|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACAGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGACGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACAGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTCGACAAAGACGCGCAACGTTTTTCTTACAGATTTCGACGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|10|10|1737827-1739136|CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGACAAAGACGCGCAACGTTTTTCTTACAGATTTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|10|7|1737827-1739136|CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGACAAAGACGCGCAACGTTTTTCTTACAGATTTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019796|10|8|1737996-1738344|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGACAAAGACGCGCAACGTTTTTCTTACAGATTTCGAC


>NZ_AP019796|10|9|1738485-1739136|PILER-CR
	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGACAAAGACGCGCAACGTTTTTCTTACAGATTTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161541120.1\|1747484_1748291_-\|acyltransferase	unknown	unknown	gnl\|CDD\|143601
NZ_AP019796.1\|WP_161542395.1\|1748295_1748712_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl\|CDD\|238385
NZ_AP019796.1\|WP_161541108.1\|1730034_1730631_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|377317
NZ_AP019796.1\|WP_161541107.1\|1729549_1730032_-\|DUF488-family-protein	unknown	unknown	gnl\|CDD\|377317
NZ_AP019796.1\|WP_161541117.1\|1744090_1744633_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274008
NZ_AP019796.1\|WP_161541115.1\|1739320_1740862_-\|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	gnl\|CDD\|187878
NZ_AP019796.1\|WP_161541111.1\|1732745_1733102_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_AP019796.1\|WP_162556495.1\|1744820_1745036_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012843837.1\|1748779_1749043_-\|MoaD/ThiS-family-protein	unknown	unknown	gnl\|CDD\|340452
NZ_AP019796.1\|WP_161541110.1\|1732166_1732487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541109.1\|1731731_1732106_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_012843833.1\|1745465_1746509_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_AP019796.1\|WP_161541114.1\|1735612_1737094_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541113.1\|1733567_1735604_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|350691
NZ_AP019796.1\|WP_161541116.1\|1741029_1744125_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541118.1\|1744945_1745218_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161541112.1\|1733109_1733379_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236966
NZ_AP019796.1\|WP_161541119.1\|1746513_1747500_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|183621
NZ_AP019796.1\|WP_161541105.1\|1727142_1728720_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_AP019796.1\|WP_161541106.1\|1728827_1729553_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161542395.1\|1748295_1748712_-\|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl\|CDD\|238385	cd00756, MoaE, MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.	1.23368e-54
NZ_AP019796.1\|WP_161541108.1\|1730034_1730631_-\|DUF488-family-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	1.98834e-21
NZ_AP019796.1\|WP_161541107.1\|1729549_1730032_-\|DUF488-family-protein	gnl\|CDD\|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	3.30234e-13
NZ_AP019796.1\|WP_161541117.1\|1744090_1744633_+\|hypothetical-protein	gnl\|CDD\|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000214258
NZ_AP019796.1\|WP_161541115.1\|1739320_1740862_-\|TIGR02710-family-CRISPR-associated-protein	gnl\|CDD\|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	4.9115e-35
NZ_AP019796.1\|WP_161541111.1\|1732745_1733102_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	1.25878e-06
NZ_AP019796.1\|WP_012843837.1\|1748779_1749043_-\|MoaD/ThiS-family-protein	gnl\|CDD\|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	5.3299e-26
NZ_AP019796.1\|WP_161541120.1\|1747484_1748291_-\|acyltransferase	gnl\|CDD\|143601	cd07577, Ph0642_like, Pyrococcus horikoshii Ph0642 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup of the nitrilase superfamily. This superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. Pyrococcus horikoshii Ph0642 is a hypothetical protein belonging to this subgroup. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). This subgroup was classified as belonging to class 13, which represents proteins that at the time were difficult to place in a distinct similarity group. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	2.08035e-168
NZ_AP019796.1\|WP_012843833.1\|1745465_1746509_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.39744e-105
NZ_AP019796.1\|WP_161541113.1\|1733567_1735604_+\|AAA-family-ATPase	gnl\|CDD\|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.27887e-33
NZ_AP019796.1\|WP_161541112.1\|1733109_1733379_-\|hypothetical-protein	gnl\|CDD\|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0.00322704
NZ_AP019796.1\|WP_161541119.1\|1746513_1747500_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|183621	PRK12607, PRK12607, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_AP019796.1\|WP_161541105.1\|1727142_1728720_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.60625e-122

>NZ_AP019796.1|WP_161541114.1|1735612_1737094_+|hypothetical-protein
MTTAISTEELRRFKALCQQKNFGQALPLARRFHPLLVQNVHLARQWGWVIYERLKDLAEQARAKQAPASRQANSLPEHLSRKIREALVEYARLPNLHTPDLLHAMILVMVCRIGIRWSGVLGFLYHVRAFDTLRPEDRLPKTYGDRTYPSIEQLLTQTVAAALAKLPLRDQRPEVLDWACVQVQQRLDRFPDEPWIPYHLACYLIKKQRGPDARPLLAPVLLQHRHKSWIWERVARANHDRPEHRLTALTQALRLAERELPAVRFRLHLELADLLATRQRHDEAAAQLQAARRLEEQLGRNVRDDRNPLWQRYRHMLQQPWFRQRAEQTNLPRTPTLTIEPEAMLYEHLPTTESSGVIIGHNSEKGLTIIRLSPSKIVCVKHRKFPDASRLEPGTVVWLRLVAEQVVALEPRPDHPLPDLVRWFRGRLLQPDGRAFAFVITGDEQRIFIPPRLNRKLNLEADATVEVLAERTIDPTKNTHSWSALKVKPVADQ
>NZ_AP019796.1|WP_161541113.1|1733567_1735604_+|AAA-family-ATPase
MVELSGEQQRILDQLLAWLDRPEAPPIFILTGSAGTGKTLLIRHLVQALHQRRIKYALAAPTGRAARLLADRTGEDARTLHSLIYILDRYQLIEEAEAQAEDPLSLRLHFALRSAELDARLIIVDEASMVGDVVGEQELYRFGSGRLLLDLLSYARLMPRRAGEVSSRLLFVGDPAQLPPVGQSISPALSAEYLRETFGLSAETAHLQTVFRQRKGHPILEAATALRNALENNRFHTFQLPAQPPDLRPVGIEEAIQIAAQDFERQTPSVLLCRTNALARKLNEAVRALLWGKESLPLQPGDLLLVNRNAPLYSLFNGDLVLVETVGPLEHRRVGRRGRPPVDLYFRDVILRYPHDNPRRRITCKLLENLLESPDGQLSPDLIQALLIDFYLRNRTLKPGSPEFHLELARDPYFNALHVRYGYAMTVHKAQGGEWRRAAVVFTDWKHFRHADFFRWAYTAITRAREELLTIDAPAFEAFSEMRWQPAASVPAAEQTAGSAARFPLKALETYHRRLTEALSAEGIETTDVELLQYAVRYHLSREDRTTRIQYYYRGNGQVSRIVTLGGADDPELTQQAYALFERILSEPPPASDELPENPLLREFLERARHRLEGSGIRIVNWKEMPYALRLYFSADGENATIDFYYNRRGVWTHAQQVGRSSSGSLFARIQLLLQSDG
>NZ_AP019796.1|WP_161541112.1|1733109_1733379_-|hypothetical-protein
MNDFWYEEDFEFDDEFEGDPESGDYEGFQDLPDARDWEEDWDDEWDDWDDELDDGLATCDICGAPVGRYGYDDGYMTLCEDCRDQMYGD
>NZ_AP019796.1|WP_161541111.1|1732745_1733102_-|single-stranded-DNA-binding-protein
MEPLQPKRTVNRVILLGRLAAPPEPVSEAGNVCQMVLTTQEQAIGPTGEPAVRLEPHLLQVEDAALRDFCLRHLTVGQILYVEGMLRRNEWPERNAMPVVVLVRKLLVASWDAGEPSA
>NZ_AP019796.1|WP_161541110.1|1732166_1732487_-|hypothetical-protein
MRTSYRFMLHYRGSNPELMPALIRALSQMGYGPVTGPAFIWTFEQPQLDQVLKKLQLRICRELARSGAPGEEVTVSYGPAAVAAGRVDLFGEELSPDLEGWPELSR
>NZ_AP019796.1|WP_161541109.1|1731731_1732106_-|hypothetical-protein
MACPVLLEFLLYIEGENDLEKDLEGLRQRLPEAEVNAWPGAFDLEVSCLIEVEAERIYDEVERICETIKSWARSHLNGREPYGSISWKVPRMLVGRMRIRYEEAREFMNRRRERICAQVQQLCN
>NZ_AP019796.1|WP_161541108.1|1730034_1730631_-|DUF488-family-protein
MNEVQPLFTVGYGTSSIEEFINVLKQYEIKCIVDIRSNPYSKFNPDFSIGTLKNHLEKNGIAYEYMGDTLGGKPTDESCLENDKPIFSVIKEKDFFKEGIRKLLSLWRYYQPQRIALMCACQYPDKCHRSKLVGQYIYETRSDNDIRIIHIYKDKNGEYKVIEQDKVILKIVSGQLNLFGFDFESKIAVSGKKIKKDA
>NZ_AP019796.1|WP_161541107.1|1729549_1730032_-|DUF488-family-protein
MIEQIFTIGVYGRDEDSFFDTLQQNKIDTFCDIRQRRGVRGREYKFVNKNYLCQKLDKLGIRYVYLKELAPPREVRAIQRAVDQKKSILKRQRTLLSHAFIEAYKQACLSKISPVDIFAKLPVDSKRIVFFCVEKDPRACHRSILTDWIEQKENIPVVHL
>NZ_AP019796.1|WP_161541106.1|1728827_1729553_-|hypothetical-protein
MNKIKVLIVARTRTNNDQMRCIGGLAWEENEAQCYSVRLMNPRDLYRGRIIRRGFKGFWDTSAPYRIGDVWELTVRELEQKIPPHVEDVIVEDAILLKKIRVSEMYDRILYMLQKSRLPILWRGDPNNLFDGKIQFNKNGKGYIDKNNVSKCSTGFWLPDKNLYKSYDSNNKLCYRYKADNNRLYYIPYVGVFSKTPPVIKEGSLIRVSLSRWHRETEMCWLMISGWFEPPHPRLSCDLYG
>NZ_AP019796.1|WP_161541105.1|1727142_1728720_-|CRISPR-associated-endonuclease-Cas1
MQAPYEGPCWPVAWVYEFAYCLRRGYYAWVEGPGEPVALSSGEGTWMAADGWCGPVQFIRDGHGSPVPVIRLAHVAESDTAERPEHLMLAALARLIEAETGQSVARGIVQYGPTGRQEVVTLDERLRAAWQRLDAEIRAVIHEGRLPAPRADQRCPACPRLEVCNPSGAAETAAQLNVLPPVRQARTLYVDEIGAVVRRDGRQLVVTVSRNGTRRELLRLPALLVDQVVLVGPVQITSQALRLLLRQNVDIVYLSTEGRFEGRLATEFHPHVALRLAQYEAARDPQRALPLARQFVRGKLQNMARLLRHYAQDYRNSTLEATAAAIESDLQHLSELKSPDAVRGLEGAATRRYFSVFNEMLRPEAHEPIDWPVFPGRNRRPPTDPVNATLGYLYALLLGNLVTACAVAGLDPYVGYLHTPAYGRPSLALDLMEEFRAPIADRLTLHLFNRGKLRPRHFEERSGGVYLNEEGRAVVLAAWQEWRQQVSRHPVLGLEMSQMRHFEAQARLLARTLQEPGAEYTPFVA
>NZ_AP019796.1|WP_161541115.1|1739320_1740862_-|TIGR02710-family-CRISPR-associated-protein
MRVRFLLVRLPFQRSLVLVMQELEGQQRVGVVPVIAPGETFHDEQAYRIFQEVDAGRLPAGAEIVGEFEFPDEEAAQEAARRFAQDLKESLWGEEVAAQEQHAPSRVETVLLLTVGGSPEPLIRAVQRLDPSQSFVCFICSPDSRRLVETAGDAPNIPRAAGLPATHYAVEVWSDPDDLAGCVSALFALHRRIRSRFPEARVVANYTGGTKTMSAALVIGAVLLGWELQLNVGVRRDLRQVLAGTDVPMRVAADDVLLHLELRLLRQALDRYDYVAAAEIVRELLRTLSLSGARRTQVLRLYQIVQGLAAWDVGQYRQALVGFGMAGAHGSAWLPRLRTLAEAQKPGLEAVADLLLAAARRAHQGRYDDAVVRLVRAVELFGTVRLQQAHGIDIRHPDQARLPEVLRAEPAVSRDRWPGSPELSYHMLEALGDPVGQLFARRRSVLREALERCRDSLLLAGSAALDEQEYEAVRNRLEGFLHEAARVVAESLRAPQLPRSEVLEWVELGPAGA
>NZ_AP019796.1|WP_161541116.1|1741029_1744125_+|hypothetical-protein
MRNTCMVVFQAPVDPDRSPQSPPHRIWLHQDVLEFLHGRDASVRRLGIVLRQIAARGRPNRIKSCRTPENRGWLRTPMGGGGSGMHFYLWWAPSDSERVAPLVPSDNEVFLRTIRHHDNHDPLDCGQRHDYILLSLQELQTEHIDGVDCAPWTPEQRAFIDAGEVTRIVLGRPGSGKTASLWRAVERHPARHLLYLTWSRELAWQAHLNFSALAPGRTVRCWHFSRLLRAITQQDEPRLTLTESRRRFREALQLLSARQLGPWKQRLTALHAELRAFLIGRARPGHASTVFHRPVFHLRQEAYAGLRRDDRHPDAIEKAWHVFELLCRNEQLAEIFPELAAASQAIRILRAGRLPTILETIEGIVVDEVQDLTLLELSVVVELWHMLARRRSTPPLLLLAGDEGQTVRPSGFRWGPYKEWLSERIAPPRDYELGESLRCPANIARTFERAARYYSKLPREERPARQRRDTRAAPGGHLIYVAAENQQQATSLIQKLCDEESLVVVSLEDEVPEHIWSPALIKGLERQTVVVLNPGAVLERLDRFVAEEHFAFDREDYRTEVDRLRVALSRSSETLVFLDVAPTAAQRACSLRLLGDDVVEVPPHELLDNLEQAELSLLERIQARLEEFSVRIDDDPVQALRLALRARDLQLRIRSLGEHIPANIAREVPRAILLSIARLLTDDRVLPEVETPDLLQQAREAASELGPEHLRAFDELVRWHQSGRVFPAALLKAACRLTGEAEWLRQALSAIAYSLHAALERSARRPESAGVFLEDVAAWLRFLDYAGNLEEAVRQLRGLAFDALLAAGDLATAQQMLERIQPPDLLRKGRLLEAKNELEEAIEAYLQAGAYTEAERVRQRLYHFRNDTLRRFRHLADQCSALEQIPVLTSMLSGAQQRLATRYIQLHFEARKDASVQNTLYAFLSYLQAVHQHTDQLEDPELMMLGALEELTRRRHRACAAAAQLLFEHYGTRSMARRLLASPAGELPECSEPAVFCLAASTLETLRNCPPYQNLLAFIDHGKPTRRAAES
>NZ_AP019796.1|WP_161541117.1|1744090_1744633_+|hypothetical-protein
MENRHAALLKAEQQIQEIAEELSRLRDATLLLTEAQHGVDQVLRSCQHLNDRVADLFEHLHAAASALQEAGFPELKASLDQMGTDIEKLQARQHEASRQLEALHQTLRYLHESIVQIVNGYNSLQATGERLQTDLESLMLATSQLADRIATIETRQQRSLWMLAVVAGLVLLTLIIMLWP
>NZ_AP019796.1|WP_162556495.1|1744820_1745036_-|hypothetical-protein
MEEAGSAAEVAGAGAVFHFFSSGGFAPGSLMEEESGRLQETLKALQTRVTLVLGTLGLIILLLLLLIFRTG
>NZ_AP019796.1|WP_161541118.1|1744945_1745218_-|hypothetical-protein
MERYAAAELKVPPVVRTGREWAGDFDLDLMAEHADGSWTIGECKWTQRPVGVEVLRELQSRWKRLVQRQRLPEQVRYFIFFPAAALRPDR
>NZ_AP019796.1|WP_012843833.1|1745465_1746509_+|LacI-family-DNA-binding-transcriptional-regulator
MAQRIRPKKKDKVTIYDVAREAGVAISTVSRVLNNSSDVSEETRQRVLRAIEKLQFRPDRTARTLAQKKTRVLAVAVTSFTTPFHNEILKGVRTAMENVDADLLLSDLGSKYPQQKLLNFLRRGAVDGLLVIGLPADEKLTLELRALHAPVVMVGYHHTDFDCFYWDDRVGARKAVEHLIACGHRRIGMIRSHTEGSLQLDRIAGYREALEAAGIPFDPELVRAGKTEKHAGFSEEAGYEAMQDLLKIEPRVTAVFASSDVQAIGAWKALREAGLRVPEDVALVGYDDIKISEYIGLSSVSQNMHAVGREATRLLVERVEGKRQDPPLEVLVVPQLKIRYSSDCGRA
>NZ_AP019796.1|WP_161541119.1|1746513_1747500_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MVSESLIRVQLDRTIRETNLQELGTPYRGKVRDVYTVDGHLVIVTTDRISAFDHILRQTIPFKGQVLNQLAAYFFRHTADLVPNHVEAVPDPNVTVARRCRPIPIEFVVRGYLAGHAWRVYRSGRRELCGKKLPEGLVQNARLPEPILTPATKAKEGHDEDISREEILTRGLLDAETFDHIEAMALALYRRGAEMAARRGLILVDTKYEFGIDDEGTIRLIDEVHTPDSSRYFYADEYEERLRKGLPQRQLSKEFVREWLMEHGFMGQPGQQLPDLPDDVRVEIARRYIEVYEQLTGEPFQPDTHPDPEQRIRENLAALPLLQAQLSR
>NZ_AP019796.1|WP_161541120.1|1747484_1748291_-|acyltransferase
MQVAYVQYNPAYLQVTQNLKQVEALLEGIEADLIVLPELFASGYFFRSHEDLEVVAEPIPEGPTTQWMIEWCRKTGTVMVGGLPERDGDRFYNSAVVVGPEGLIGRYRKVHLFYEEKLHFSPGNLGFQVFEVADRNGQPYRLGVMICFDWYFPEAARTLALQGADVIAHPSNLVRPDCPRAMPIRALENHVFTITANRYGTESNGRETLRFIGRSLICDPSGRVLQEAPAEGDQVGIAEIEPQEARNRRITPYNDLFEDRRPDCYRLS
>NZ_AP019796.1|WP_161542395.1|1748295_1748712_-|molybdenum-cofactor-biosynthesis-protein-MoaE
MHEPLPVAEAVSFLQTPEAGGLALFLGTTRRWTDDRETLSLFYEAYEPMALAEMGRLSDEALRRWPVRRLCLWHRLGDVPAGEISVLVGVATPHRAEAFEACRFLIDTLKRQVPIWKRETLSDGQNVWVEGIPESKPR
>NZ_AP019796.1|WP_012843837.1|1748779_1749043_-|MoaD/ThiS-family-protein
MSDAPQVRLRVLLFSTLRERLGSSELEVFVPAPATGSRLLDQLAAQYPAIAAYRPVVRLAVNQEYVPESVELHENDEIALITPVSGG

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Crispr_ID: NZ_AP019796_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_11

2074729-2080688

TypeIII

I-A,II-B,III-A

Consensus_repeat	Method
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRT
TATTTCAATACCAAAAAGGTGCGATTAAAACCA	PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	PILER-CR

89 spacers

cas2,cas1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

The CRISPR arrays of NZ_AP019796_11

>merge|NZ_AP019796|11|2074729-2080688|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TGGAATATCCCAAAAAGGTGCGATTAAAACCGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCTATTTCAATACCAAAAAGGTGCGATTAAAACAAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTTATTTCAATACCAAAAAGGTGCGATTAAAACCGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAATATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAACTTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCATATTTCAATACCAAAAAGGTGCGATTAAAACATCTGTGGATCGTCGACTCTGAAATATCTGTACCGGATTTCAATACCAAAAAGGTGCGATTAAAACCTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTCATTTCAATACCAAAAAGGTGCGATTAAAACATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAAATTTCAATACCAAAAAGGTGCGATTAAAACAGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTGATTTCAATACCAAAAAGGTGCGATTAAAACGCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCAATTTCAATACCAAAAAGGTGCGATTAAAACAGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCGATTTCAATACCAAAAAGGTGCGATTAAAACTGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCCATTTCAATACCAAAAAGGTGCGATTAAAACCGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCGATTTCAATACCAAAAAGGTGCGATTAAAACAAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCCATTTCAATACCAAAAAGGTGCGATTAAAACCGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCAATTTCAATACCAAAAAGGTGCGATTAAAACCTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGACATTTCAATACCAAAAAGGTGCGATTAAAACTCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGTATTTCAATACCAAAAAGGTGCGATTAAAACTCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCCATTTCAATACCAAAAAGGTGCGATTAAAACGCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCTATTTCAATACCAAAAAGGTGCGATTAAAACCAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGCATTTCAATACCAAAAAGGTGCGATTAAAACGAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATCATTTCAATACCAAAAAGGTGCGATTAAAACTTGGAATCACTGTAATCATATCCCCAATCGCCCTTGTATTTCAATACCAAAAAGGTGCGATTAAAACCCAAGACGCTCAAGCGCATGATTGACATGTACCTGCGATTTCAATACCAAAAAGGTGCGATTAAAACCTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGTATTTCAATACCAAAAAGGTGCGATTAAAACCTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAGATTTCAATACCAAAAAGGTGCGATTAAAACCGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACCATTTCAATACCAAAAAGGTGCGATTAAAACCCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGCATTTCAATACCAAAAAGGTGCGATTAAAACTTCAGTTCGGACGACTCACGATCGCGTCCGGCATCGATTTCAATACCAAAAAGGTGCGATTAAAACCGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGGATTTCAATACCAAAAAGGTGCGATTAAAACCCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGAATTTCAATACCAAAAAGGTGCGATTAAAACACGACTGCTACGACTCGTTCACCACCCACGCCATAAATTTCAATACCAAAAAGGTGCGATTAAAACAGGAACGATGAAGCCATGAAAGCACATCTCTGCAGGATTTCAATACCAAAAAGGTGCGATTAAAACACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTTATTTCAATACCAAAAAGGTGCGATTAAAACGCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTCATTTCAATACCAAAAAGGTGCGATTAAAACTGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCGATTTCAATACCAAAAAGGTGCGATTAAAACAAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAAATTTCAATACCAAAAAGGTGCGATTAAAACCCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACGATTTCAATACCAAAAAGGTGCGATTAAAACTCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCGATTTCAATACCAAAAAGGTGCGATTAAAACATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCCATTTCAATACCAAAAAGGTGCGATTAAAACCGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATCATTTCAATACCAAAAAGGTGCGATTAAAACTGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGCATTTCAATACCAAAAAGGTGCGATTAAAACCGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACCATTTCAATACCAAAAAGGTGCGATTAAAACCAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTGATTTCAATACCAAAAAGGTGCGATTAAAACCTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAGATTTCAATACCAAAAAGGTGCGATTAAAACGGAGGCCGGAGATCGCCTCATCATCTACCATCCCGAATTTCAATACCAAAAAGGTGCGATTAAAACACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCAATTTCAATACCAAAAAGGTGCGATTAAAACTGAGGACATTGCCGGAAGCATTCAAAACAAACACAAATTTCAATACCAAAAAGGTGCGATTAAAACTGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTTATTTCAATACCAAAAAGGTGCGATTAAAACCCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAAATTTCAATACCAAAAAGGTGCGATTAAAACATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAAATTTCAATACCAAAAAGGTGCGATTAAAACGCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATCATTTCAATACCAAAAAGGTGCGATTAAAACTGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAGATTTCAATACCAAAAAGGTGCGATTAAAACACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTCATTTCAATACCAAAAAGGTGCGATTAAAACCTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAGATTTCAATACCAAAAAGGTGCGATTAAAACGAGGCTGGCGGGGATGGATGAAGAGGTGACGGTACATTTCAATACCAAAAAGGTGCGATTAAAACACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTGATTTCAATACCAAAAAGGTGCGATTAAAACTTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGAATTTCAATACCAAAAAGGTGCGATTAAAACCGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGAATTTCAATACCAAAAAGGTGCGATTAAAACCGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCAATTTCAATACCAAAAAGGTGCGATTAAAACCGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCACATTTCAATACCAAAAAGGTGCGATTAAAACTCCGTAATCGTCAGCTTACCGCCATACCTGACGCAATTTCAATACCAAAAAGGTGCGATTAAAACGGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCAATTTCAATACCAAAAAGGTGCGATTAAAACCCGCCTTTCTGGAGGAACGGGGTGCGACGGTACAGATCAGCATTTCAATACCAAAAAGGTGCGATTAAAACTTTTCTGGAGCAGCAAGGCGCAACGGTGCAGATCAGCATTTCAATACCAAAAAGGTGCGATTAAAACTCTGCATATCGTCGCATGCTTCACCCAACACAATAATTTCAATACCAAAAAGGTGCGATTAAAACAAGCGCCGCCTTTTGCGCCTTGCGCAGCGCCTTGAATTTCAATACCAAAAAGGTGCGATTAAAACCTCTTCTGCGCGGCCTTCCTGGATGTGCTCGGCATCATTTCAATACCAAAAAGGTGCGATTAAAACGACCACTCCAGCGCCTGCTTCCAGGCGCGGATGTCTTATTTCAATACCAAAAAGGTGCGATTAAAACCTTTGCCGAAATCAGTTCGTATCCGCAAAGATAAAATCATTTCAATACCAAAAAGGTGCGATTAAAACGAGAGCGGCTCAGATCATCTCGGGACGGACACGATCGGACATTTCAATACCAAAAAGGTGCGATTAAAACTCGATTTCTGAGCCGCATTCCGGGCATTTCAGCGTCATTTCAATACCAAAAAGGTGCGATTAAAACTGGCCTCATCGGCCAGCCCGCCCGTCACGGGCACCACGATTTCAATACCAAAAAGGTGCGATTAAAACCCGTCGCCTTCTCCGCGCAGGTTAAACGAAACATAAATTTCAATACCAAAAAGGTGCGATTAAAACGAATCGAACGGGAATGCCGCGCCGTTGGGCTGACTCTGATTTCAATACCAAAAAGGTGCGATTAAAACCGGTGAGCGGAACAACGAGCGTGCCCTCCCACACGCATTTCAATACCAAAAAGGTGCGATTAAAACGGGCGGGTCTGATGACCGGCCGAAGCGCCGCCGCAAAATTTCAATACCAAAAAGGTGCGATTAAAACGAGAGCGGGCGCCCGTTCGGCACGTGGTTTGAAGCATTTCAATACCAAAAAGGTGCGATTAAAACTCATCCAGATGCTACGATGAAGCTGAAAGTAAGAGATTTCAATACCAAAAAGGTGCGATTAAAACGCGATTACGGCACGACCTACTACTACTGGGTCACGGATTTCAATACCAAAAAGGTGCGATTAAAACGTAGTCCGCTGTCGGCGGCGAGTTCGTTCATAATGTATTTCAATACCAAAAAGGTGCGATTAAAACGTGGTATCTCTACCAACGCCGCAACGTGCCCAACGAGATTTCAATACCAAAAAGGTGCGATTAAAACCGTCTGCACCGCCGCCGCCATCTCCGGCACGATCGCCATTTCAATACCAAAAAGGTGCGATTAAAACTTGCCCGGACTCAATCTCGAATCGCAATCGATATGCCCGACGATTTCAATACCAAAAAGGTGCGATTAAAACTCTCTTCATCGGACGCCGTCCGGGCGGTCGACTATGCATTTCAATACCAAAAAGGTGCGATTAAAACAACTGGAGGGTAGAGCCATGAAGGTCAAAATCTTCGTATTTCAATACCAAAAAGGTGCGATTAAAACCTTCACGTTTTCTTCACGAAACAACCCTTGACGTATATTTCAATACCAAAAAGGTGCGATTAAAACGCGACAAGGTCATCGCCCGGCGACGGGGAACATACGTATTTCAATACCAAAAAGGTGCGATTAAAACGCAGGTAGAGCGCGCGCTGCTGGATCTGCTCGACGAATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|11|11|2074729-2080688|CRISPRCasFinder
TGGAATATCCCAAAAAGGTGCGATTAAAAC	CGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTTTCTGGAGGAACGGGGTGCGACGGTACAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTTCTGGAGCAGCAAGGCGCAACGGTGCAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTGCATATCGTCGCATGCTTCACCCAACACAATA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCGCCGCCTTTTGCGCCTTGCGCAGCGCCTTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTTCTGCGCGGCCTTCCTGGATGTGCTCGGCATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GACCACTCCAGCGCCTGCTTCCAGGCGCGGATGTCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTTGCCGAAATCAGTTCGTATCCGCAAAGATAAAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGCTCAGATCATCTCGGGACGGACACGATCGGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCTGAGCCGCATTCCGGGCATTTCAGCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGCCTCATCGGCCAGCCCGCCCGTCACGGGCACCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGTCGCCTTCTCCGCGCAGGTTAAACGAAACATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAATCGAACGGGAATGCCGCGCCGTTGGGCTGACTCTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTGAGCGGAACAACGAGCGTGCCCTCCCACACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGGGTCTGATGACCGGCCGAAGCGCCGCCGCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGGCGCCCGTTCGGCACGTGGTTTGAAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCATCCAGATGCTACGATGAAGCTGAAAGTAAGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTAGTCCGCTGTCGGCGGCGAGTTCGTTCATAATGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTGGTATCTCTACCAACGCCGCAACGTGCCCAACGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCTGCACCGCCGCCGCCATCTCCGGCACGATCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGCCCGGACTCAATCTCGAATCGCAATCGATATGCCCGACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTCTTCATCGGACGCCGTCCGGGCGGTCGACTATGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AACTGGAGGGTAGAGCCATGAAGGTCAAAATCTTCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCACGTTTTCTTCACGAAACAACCCTTGACGTAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACAAGGTCATCGCCCGGCGACGGGGAACATACGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAGGTAGAGCGCGCGCTGCTGGATCTGCTCGACGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|11|8|2074729-2080688|CRT
TGGAATATCCCAAAAAGGTGCGATTAAAAC	CGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTTTCTGGAGGAACGGGGTGCGACGGTACAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTTCTGGAGCAGCAAGGCGCAACGGTGCAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTGCATATCGTCGCATGCTTCACCCAACACAATA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCGCCGCCTTTTGCGCCTTGCGCAGCGCCTTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTTCTGCGCGGCCTTCCTGGATGTGCTCGGCATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GACCACTCCAGCGCCTGCTTCCAGGCGCGGATGTCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTTGCCGAAATCAGTTCGTATCCGCAAAGATAAAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGCTCAGATCATCTCGGGACGGACACGATCGGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCTGAGCCGCATTCCGGGCATTTCAGCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGCCTCATCGGCCAGCCCGCCCGTCACGGGCACCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGTCGCCTTCTCCGCGCAGGTTAAACGAAACATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAATCGAACGGGAATGCCGCGCCGTTGGGCTGACTCTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTGAGCGGAACAACGAGCGTGCCCTCCCACACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGGGTCTGATGACCGGCCGAAGCGCCGCCGCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGGCGCCCGTTCGGCACGTGGTTTGAAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCATCCAGATGCTACGATGAAGCTGAAAGTAAGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTAGTCCGCTGTCGGCGGCGAGTTCGTTCATAATGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTGGTATCTCTACCAACGCCGCAACGTGCCCAACGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCTGCACCGCCGCCGCCATCTCCGGCACGATCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGCCCGGACTCAATCTCGAATCGCAATCGATATGCCCGACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTCTTCATCGGACGCCGTCCGGGCGGTCGACTATGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AACTGGAGGGTAGAGCCATGAAGGTCAAAATCTTCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCACGTTTTCTTCACGAAACAACCCTTGACGTAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACAAGGTCATCGCCCGGCGACGGGGAACATACGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAGGTAGAGCGCGCGCTGCTGGATCTGCTCGACGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|11|10|2074794-2074959|PILER-CR
TATTTCAATACCAAAAAGGTGCGATTAAAACAA	ATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTT
TATTTCAATACCAAAAAGGTGCGATTAAAACCG	TTTGTCGAGGATGGGATAATTTTCGCCGAGAAA
TATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTTTCTGGAGGAACGGGGTGCGACGGTACAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTTCTGGAGCAGCAAGGCGCAACGGTGCAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTGCATATCGTCGCATGCTTCACCCAACACAATA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCGCCGCCTTTTGCGCCTTGCGCAGCGCCTTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTTCTGCGCGGCCTTCCTGGATGTGCTCGGCATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GACCACTCCAGCGCCTGCTTCCAGGCGCGGATGTCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTTGCCGAAATCAGTTCGTATCCGCAAAGATAAAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGCTCAGATCATCTCGGGACGGACACGATCGGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCTGAGCCGCATTCCGGGCATTTCAGCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGCCTCATCGGCCAGCCCGCCCGTCACGGGCACCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGTCGCCTTCTCCGCGCAGGTTAAACGAAACATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAATCGAACGGGAATGCCGCGCCGTTGGGCTGACTCTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTGAGCGGAACAACGAGCGTGCCCTCCCACACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGGGTCTGATGACCGGCCGAAGCGCCGCCGCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGGCGCCCGTTCGGCACGTGGTTTGAAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCATCCAGATGCTACGATGAAGCTGAAAGTAAGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTAGTCCGCTGTCGGCGGCGAGTTCGTTCATAATGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTGGTATCTCTACCAACGCCGCAACGTGCCCAACGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCTGCACCGCCGCCGCCATCTCCGGCACGATCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGCCCGGACTCAATCTCGAATCGCAATCGATATGCCCGACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTCTTCATCGGACGCCGTCCGGGCGGTCGACTATGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AACTGGAGGGTAGAGCCATGAAGGTCAAAATCTTCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCACGTTTTCTTCACGAAACAACCCTTGACGTAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACAAGGTCATCGCCCGGCGACGGGGAACATACGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAGGTAGAGCGCGCGCTGCTGGATCTGCTCGACGA


>NZ_AP019796|11|11|2075057-2080688|PILER-CR
	ATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTT
TATTTCAATACCAAAAAGGTGCGATTAAAACCG	TTTGTCGAGGATGGGATAATTTTCGCCGAGAAA
TATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTTTCTGGAGGAACGGGGTGCGACGGTACAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTTCTGGAGCAGCAAGGCGCAACGGTGCAGATCAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTGCATATCGTCGCATGCTTCACCCAACACAATA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCGCCGCCTTTTGCGCCTTGCGCAGCGCCTTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTTCTGCGCGGCCTTCCTGGATGTGCTCGGCATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GACCACTCCAGCGCCTGCTTCCAGGCGCGGATGTCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTTGCCGAAATCAGTTCGTATCCGCAAAGATAAAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGCTCAGATCATCTCGGGACGGACACGATCGGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCTGAGCCGCATTCCGGGCATTTCAGCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGCCTCATCGGCCAGCCCGCCCGTCACGGGCACCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGTCGCCTTCTCCGCGCAGGTTAAACGAAACATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAATCGAACGGGAATGCCGCGCCGTTGGGCTGACTCTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTGAGCGGAACAACGAGCGTGCCCTCCCACACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGGGTCTGATGACCGGCCGAAGCGCCGCCGCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGAGCGGGCGCCCGTTCGGCACGTGGTTTGAAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCATCCAGATGCTACGATGAAGCTGAAAGTAAGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTAGTCCGCTGTCGGCGGCGAGTTCGTTCATAATGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GTGGTATCTCTACCAACGCCGCAACGTGCCCAACGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCTGCACCGCCGCCGCCATCTCCGGCACGATCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGCCCGGACTCAATCTCGAATCGCAATCGATATGCCCGACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCTCTTCATCGGACGCCGTCCGGGCGGTCGACTATGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AACTGGAGGGTAGAGCCATGAAGGTCAAAATCTTCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCACGTTTTCTTCACGAAACAACCCTTGACGTAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACAAGGTCATCGCCCGGCGACGGGGAACATACGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAGGTAGAGCGCGCGCTGCTGGATCTGCTCGACGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_012844126.1\|2080949_2081216_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_AP019796.1\|WP_161541364.1\|2085811_2086780_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_AP019796.1\|WP_012844123.1\|2070856_2071147_-\|GYD-domain-containing-protein	unknown	unknown	gnl\|CDD\|378038
NZ_AP019796.1\|WP_161541359.1\|2081217_2082300_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_AP019796.1\|WP_161541352.1\|2061854_2063165_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_AP019796.1\|WP_161552575.1\|2084212_2085295_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_AP019796.1\|WP_161541353.1\|2063791_2064859_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_AP019796.1\|WP_161541366.1\|2087915_2090783_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_AP019796.1\|WP_012844119.1\|2064939_2066046_+\|M20-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349902
NZ_AP019796.1\|WP_049772358.1\|2063161_2063725_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|334031
NZ_AP019796.1\|WP_161552571.1\|2069536_2070856_+\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_AP019796.1\|WP_161552572.1\|2071721_2072507_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|366751
NZ_AP019796.1\|WP_161541365.1\|2086791_2087919_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_AP019796.1\|WP_161552570.1\|2067464_2069393_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|223910
NZ_AP019796.1\|WP_161541354.1\|2066129_2066897_-\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_AP019796.1\|WP_161541360.1\|2082296_2082986_-\|ribonuclease-H-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|99825
NZ_AP019796.1\|WP_161541367.1\|2090776_2091724_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|187788
NZ_AP019796.1\|WP_161552574.1\|2083137_2084202_-\|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl\|CDD\|187873
NZ_AP019796.1\|WP_161552573.1\|2072582_2074616_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377084
NZ_AP019796.1\|WP_161541363.1\|2085392_2085815_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl\|CDD\|378242

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_012844126.1\|2080949_2081216_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.35167e-29
NZ_AP019796.1\|WP_161541364.1\|2085811_2086780_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.19937e-85
NZ_AP019796.1\|WP_012844123.1\|2070856_2071147_-\|GYD-domain-containing-protein	gnl\|CDD\|378038	pfam08734, GYD, GYD domain. This protein is found in a range of bacteria. It is usually less than 100 amino acids in length. The function of the protein is unknown. It may belong to the dimeric alpha/beta barrel superfamily.	1.28621e-25
NZ_AP019796.1\|WP_161541359.1\|2081217_2082300_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.26152e-157
NZ_AP019796.1\|WP_161541352.1\|2061854_2063165_-\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NZ_AP019796.1\|WP_161552575.1\|2084212_2085295_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.0485e-63
NZ_AP019796.1\|WP_161541353.1\|2063791_2064859_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	4.67866e-117
NZ_AP019796.1\|WP_161541366.1\|2087915_2090783_-\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	6.24177e-86
NZ_AP019796.1\|WP_012844119.1\|2064939_2066046_+\|M20-family-metallo-hydrolase	gnl\|CDD\|349902	cd05651, M20_ArgE_DapE-like, M20 peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases. Peptidase M20 family, uncharacterized protein subfamily with similarity to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) subfamily. ArgE/DapE enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this subfamily are bacterial, and have been inferred by homology as being related to both ArgE and DapE.	0
NZ_AP019796.1\|WP_049772358.1\|2063161_2063725_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	2.39375e-41
NZ_AP019796.1\|WP_161552571.1\|2069536_2070856_+\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	1.09522e-167
NZ_AP019796.1\|WP_161552572.1\|2071721_2072507_-\|glycoside-hydrolase	gnl\|CDD\|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	1.78245e-24
NZ_AP019796.1\|WP_161541365.1\|2086791_2087919_-\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.39774e-66
NZ_AP019796.1\|WP_161552570.1\|2067464_2069393_-\|HAMP-domain-containing-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.02041e-68
NZ_AP019796.1\|WP_161541354.1\|2066129_2066897_-\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	4.3292e-54
NZ_AP019796.1\|WP_161541360.1\|2082296_2082986_-\|ribonuclease-H-like-domain-containing-protein	gnl\|CDD\|99825	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases. A subfamily of the 3'-5' exonuclease domain of family-B DNA polymerases. This subfamily is composed of uncharacterized bacterial family-B DNA polymerases. Family-B DNA polymerases contain an N-terminal DEDDy DnaQ-like exonuclease domain in the same polypeptide chain as the polymerase domain, similar to family-A DNA polymerases. This exonuclease domain contains three sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. These motifs are involved in metal binding and catalysis. The exonuclease domain of family-B DNA polymerases has a fundamental role in proofreading activity. It contains a beta hairpin structure that plays an important role in active site switching in the event of a nucleotide misincorporation. Family-B DNA polymerases are predominantly involved in DNA replication and DNA repair.	7.65625e-26
NZ_AP019796.1\|WP_161541367.1\|2090776_2091724_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|187788	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	3.25634e-21
NZ_AP019796.1\|WP_161552574.1\|2083137_2084202_-\|putative-CRISPR-associated-protein	gnl\|CDD\|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	5.0976e-46
NZ_AP019796.1\|WP_161552573.1\|2072582_2074616_-\|hypothetical-protein	gnl\|CDD\|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	5.3448e-10
NZ_AP019796.1\|WP_161541363.1\|2085392_2085815_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	6.49329e-45

>NZ_AP019796.1|WP_161552573.1|2072582_2074616_-|hypothetical-protein
MKSYLLVLLVGLLLVGCARETRPLRLAPIFSDHAVLQRQQPIRIWGWGAPGATVTVRLDTVTAQTEVDTEGRWLVELPPQEAGGPYTLAVESNGERRVVEDVLIGEVWVASGQSNMEMPLMPRLAGWSPGDSVYGAAEAVRTANYPQLRLLTVERAVALTPQDTFAGTWQVASPQTVATFSAVAFFFARRLHEALGVPVGIIHSSWGGTPAEAWTGRDHLRELEDFREIVARLEATEPVLHELEAWRSRLQQIAVPTGNDTTFWATLDLNDGRYAENPLPDTLTMSLPTRWENTEMGAFDGVVWFQRRVQVPEAWLGRDLVLELGPIDDMDRTYFNGQPVGGYERLGYWNTPRRYRVPAALVRRDNLIAVRVIDTQGGGGLWGQPEQLRLYPENEPQAAVSLAGMWHYWPVAELVGRRLYVFGEGSLSYTGRPKLPVSLGPNTPTTLFNGMIHPLIPYSIRGAIWYQGESNVGRASQYERLFPTLIRCWRTHWALGDFPFYFVQIAPYDYGPNARSQRLREAQLRTMLRVPHTGMVVTTDVGDDHNIHPARKREVGERLALWALANDYGFRDLVYSGPIYERMEREDGRLRLYFRYAEGGLVLRPADGGEFVIAGPDRVFHPARVRVEGETLVVWSPRVPDPQAVRYGWSNTPHATLFNRAGLPASPFRTDDWPEGD
>NZ_AP019796.1|WP_161552572.1|2071721_2072507_-|glycoside-hydrolase
METMRAILVLSLLWLSGCDWLFPDGDNGKEPEPEPEPTVELCGRWDARDVAGGRYRVINNVWGAETAQCIEVGLETGNFTITRADHDNGNNVAAYPAIYFGCHWGACTNNSGLPRRVQELSDVRTSWTLTPITTGRWNAAYDIWFSPGTNSSNGYSGGAELMIWLNWNGGVMPGGSRVATVELAGATWEVWYADWDWNYIAYRRTTPTTSVSELDLKAFIDDAVARGYIRPEWYLHAVETGFELWEGGAGLRSADFSVTVQ
>NZ_AP019796.1|WP_012844123.1|2070856_2071147_-|GYD-domain-containing-protein
MATYLIFTRLGPDSFKDPAEFRQLADRVSEEIRKRCPGVTWKDSYVTLGRYDIVDVVEANDQAEVERAAMIIRALARATTETMVATPWKEFLQRLG
>NZ_AP019796.1|WP_161552571.1|2069536_2070856_+|argininosuccinate-lyase
MLWDKGQSVAAWVQRFTVGEDYRWDTLLLPYDIEGTRAHAAGLHRIGILSGEEFQAVSEALDALQAEVAAGRVVVRPEDEDAHTVIETFLTERLGDTGKKIHTGRSRNDQVLAALRLFLKDGLREAGRQVARLVEQLCELGAAYNDALMPGYTHLQQAMPSTAGLWALGYAELLLSDLAALRHAYDQVDISPLGSAAGYGVPFLELPREEVAQRLGFRTLQLHVTAVQLSRGKLELHAAHALVQVGATLNRMASDLVLFNSQEFGFVELPPEFCTGSSIMPQKQNPDVPELVRAGYHRLLAEMNVLLTLPANLPSGYHRDLQLTKEAVIRCVLHAHDLLTAMVQLLPGLRFRRDRMQAACTPALLATAEALRRVAEGVPFREAYRQAAAALDSLPQPDPETVLRAYRVDGYPGRGRPDRLLEQLRAFQDWLTPTEPEDA
>NZ_AP019796.1|WP_161552570.1|2067464_2069393_-|HAMP-domain-containing-protein
MSVLTRLKQASIRTKVILALLVPQVLVVLVTVLIWQGLRELRAAQDWVLHSHEVMQQARALALDRSEMEDFALAYLLSGAERFRDAYANQWRHFEQAVDALQQTVSDNPEQVTRLKQLAAAMQTWKQEMDELLARRPEVETGRLRMSQLAAEVVAQQESQEALQNRIASIQQAFLEAEQALNAERLARMERRERMVFIKVLVALLAVALGIGLAFQVIRRSVVGPVQELEAAAHRITEGDLETTVPVRAEDEVGKLARAFNQMVASMREALDALQEEKASVEQKVREAVAEIEAQQRYLAESVEHMLTQMERFAEGDLTVHLEVRKNDEIGRLYEGFNRAVANIRQMLVRVTEAIAATSSSAAQISASSEELAASAQQQAAQANEVAAAVEEMVRTIVENARSASETADVARANGDRAREGARVVQETVAKIRQIAQVVGESARTVERLGASSERIGEIVQVINEIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTAQATKEIAEMIEGIRSETREAVKAIQRGSQEVEEGIALADQTGAALTQIVEGAQRVLDRVTQIAAASEEQSTTSDQISRSVEMISNLSHESARGVEQIARAAENLSRLTDELNEMVRRFRLAQREAVRSPDEAVSVA
>NZ_AP019796.1|WP_161541354.1|2066129_2066897_-|DUF1080-domain-containing-protein
MQRAMRRIILLATLWIINGGITKTMAQIDTTWAIHDMNRPRPPVVTPAPFDRPTAPPSDAIVLFDGTDLSAWERVGGGPAGWRVVDGYMEVVPGSGNIQTRQAFGDVQLHLEWSVPEDVTGEGQGRGNSGVFLMGRYEVQVLDSYQNDTYPDGQAAAIYGQYPPLVNAMRPPGQWQTYDIVFRRPRFDAEGRLLQPARMTVFHNGVLVQDCAVLTGPTAHRARPPYEPHPDRLPLMLQDHGDRVRFRNIWVRPLE
>NZ_AP019796.1|WP_012844119.1|2064939_2066046_+|M20-family-metallo-hydrolase
MSGSIAQAVATEVIELLKSLVRFPSLSHQEAEIADFVEHYVRQAGLPVRRMDNNVYFWLGEGEDRLLLNSHLDVVPPSADHPFDPFEPVEVDGKLYGRGTVDAKASGAAMTTALLSLAREGWRPPNGQVIVALTACEETGGGYNGLEALRPHLPPLQAAIVGEPTCLQPCVAQKGLLILKLHARGRTAHAARPHLGDNAILRAARDIQRLSRFRFDRADPFLGAPTLTVTTIQGGTAHNVVPEHCTFTLDIRTTPAYTHAEIVQLLAGVVESEIEVHSDRFIPVATPVDARIVQACLRANPGSRPFGSPTASDWIFLHDIPTVKLGPGPSERSHTGGEHIELDELVRAVRVYRDIIRHYYALGEESRA
>NZ_AP019796.1|WP_161541353.1|2063791_2064859_-|RluA-family-pseudouridine-synthase
MELQEVCIQLEVPPGYREGGRLDAYLARFLAQASRTKIQRGIREGRVTVNGVVVQKPSYTVQPGDVITLRILRPPPVEIVPEPIPLDIVYEDPYLIVINKQAGLVVHPARGNRSGTLVNALLYHIGSGPVRFDEEDDLPEDDEIGLSMVSTGPTEAKLEAPRPGIVHRLDKDTTGLIVVAKDDVTHTGLARQFEHRTIARTYLAIVWGVPDPPRGRIEAAIGRDPRDRQRMAVVPEDRGKRAVTHYEVVETLPAAALVRFKLETGRTHQIRVHARHIGHPVLGDPTYGGRTIRYGPHTPRRKAFYDQLFARLTRQALHAHTLGFRHPRTGEWLEFEAPLPEDMARALEQLRQDPL
>NZ_AP019796.1|WP_049772358.1|2063161_2063725_-|PTS-sugar-transporter-subunit-IIA
MIRFRKHRRTGEQTTPAPAEVRPEPAMQTSTSQIHQLLVPETIRVGLPGHTKEEVLNHLIDLLRGHPAVRDLEAVRQAVLARERMMSTGVGKGLGLPHAKTPAVTTTVAAFAITAEPVEFDAIDQQPVRLLFLLVGPEAAKSQHIKLLSRISRLMNRDGFRTRLLEARTPEEVLHLFEEGESQLVDQ
>NZ_AP019796.1|WP_161541352.1|2061854_2063165_-|histidine--tRNA-ligase
MSLEPTFRNIRGTFDILPQDGRSEGAHDMPSRAWQHVEQVVREVLERFNFREIRTPILEPTELIARGVGQLTDIVTKEMFAFRRGDTNYVLRPEVTAPVMRAYLQHRLDQQGAVQKLYYIGPCFRAENPQKGRYRQFHQFGVELIGAETPEADAEVIAAMMAVYEAFGLKNLRLRINTLGDAESRPRYREALRAYLQPLADRLTPTSRQRLETNPLRILDTKDERERRLLEGAPRIIDFVDEKGRAHYEAVKAHLQALGIAFEEDPFLVRGLDYYTHTTFELESPDLGAQSALAGGGRYDLLAMDLGHDAPVPAVGFAAGIERLFIALQAQGYAFPEEPPLDAYLVSLGEAAMRRALVEAQALRRAGLRVDLDLKGRSMKAQMREANRQQARYAVIMGDRELAEGRAVVRDMQSGQQQEVPLDELADFLKGAVRVS
>NZ_AP019796.1|WP_012844126.1|2080949_2081216_+|CRISPR-associated-endonuclease-Cas2
MPYYIAVYDVNVRRVAKMLKLFRRYLTWVQRSVFEGELTEAQFQRLQHEAGRLMNPDEDVVIFYELRDVRYSRRLVLGTEQGHRDRFL
>NZ_AP019796.1|WP_161541359.1|2081217_2082300_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKRPYYIFSSGRLRRRQNTLFFEKAAGERIPDDQDETGEPSGTPTGERIPFPVEQVESLYFFGEVDLNSKLLTFLARHDIPAHFYDYYGNYTGTYIPRDYLHSGRLRIEQVLHYVRPKRRRYLARAIVEAATYNLLRVLRYYVNRLEGERREAVAEAIATIEQERTQLRSAEKIPELMGIEGRSREAYYSAWPSILADGPGEAFVFEKRERRPPSNEINALISFGNSLCYTTTIRQIHRTALDPTISYLHEPGARRFSLALDLSEIFKPILVDRAIFRLVKTGEITPRHFEERLGGVYLKEEGRRIFVRHWDERLRQTVYHRRLERHVSYERLIRLECYKLIRHLLDPKNEPYRGLHMWW
>NZ_AP019796.1|WP_161541360.1|2082296_2082986_-|ribonuclease-H-like-domain-containing-protein
MHYLALDIETCPLPADGYSAQQQARLAREVHFLRQREPEAHEEALAQRAASLHPLLSWIVCISVQRAVDDPFRPNPPHSYLAPTPDDEGAMLARFWRDVQQFVDLGEKILWITFNGKRFDVPFLLARTLHHGLLPVACGLLDDYPYKQYPHCDLFNLFAGINLGLADLCALLHIPSPKEHGDGSLVQHLLETEGIEGVRRYCEADVVATMACFARLLPLLPRDCQPPSS
>NZ_AP019796.1|WP_161552574.1|2083137_2084202_-|putative-CRISPR-associated-protein
MRTLLITVGTSLLANARKEFKKQELNDQEIAHYLRHSSPEQASAETNSLSRLLQEGDKLIFLHSQTEEGQFCAEALRRYYNSEGYQAESLEIQDLTYAERRFKMRGLRSLVATLTELIRRERKQNREVLINATGGFKAEIAYATLVGLLFDVPVYYIHEAFRDIIEMPPTPIGWDYSLLAEYEEFFEWIHADYRDTREVENRLRGLPRTQEIHLLLTEEEGYTFLSPTGEAFYEAYQNRLEQAQGTPVWLSDSAWRTYEQAEPAVKALFDRTLAKLRLQELRRSGSDQVHNCDCFVFPKGHRDERLFYFEDEQGGIRVCELTRHSDQSYERAIQRGVRRSNYQNWRRFEVENRV
>NZ_AP019796.1|WP_161552575.1|2084212_2085295_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MADQVSGLQTCLNPGLWLDHFTEWQKPRGELKRTEASDKRQRIPRSFTLPELCQLLSAYRNRWDRMTDALRAQNYIVQMFTLCAASRVIVGLGAESVLETSIRLHRIYGFPIIPGSALKGVTRAYARLVEGKDEDDPIFAEVFGKSPPKAQAGKVIFFDAIPANPSNLTLELDVMNPHYGPYYQGVAPPADYHNPVPVFFLTIGPGSEFLFAVASRERGLAERAQGWLTKALTEMGIGAKTVAGYGLWRECRREARSGLDKEATESASSNAGSESDRPEVLKELPRKQEERIPAEVVDNRQRPVKVRLLVEGYADRIIPCTGARNLESFQPGTFIWVTVSQRAKDGTVRQVSLSGLWKSR
>NZ_AP019796.1|WP_161541363.1|2085392_2085815_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MSTKSLQKTLEQKRAERAWTCVQEVLSQAQNLEDPESFKKKYNSLARKVPMLVLTNGLGQTLAFLKAKGKNDPANEHTVLFRHLSNWVVSQVAPSPTASNGDLLQWVLENDSVAYRRATTEALAFLTWLKRFAEAELPED
>NZ_AP019796.1|WP_161541364.1|2085811_2086780_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFDRAAILFLYTETPLHAGSGTSLGIVDLPIQRERTTGYPMIQASGLKGCLRDVAAGDTQKVEIVFGPETQRASDHAGALSVGDARVLLFPVRSLAGVFAWVTSQNVLARFKREAEMAGLQVNWEPIGPAPTDDGTAFVANGSGVVANGRVVLEEFAFTAQENNTVADIAKWFQDKAMPQGDEYTYWRESLEKRLVILPENAFRDFVQLSTEVIARVRIDDTKKTVERGALWTEEHLPSETLLYATLFASKPRVKDDELPDDWKQANDRVEKILEFVREAVDGKRLQLGGDATVGRGIVKVRFVEGQGQAQATSGTQTGGQP
>NZ_AP019796.1|WP_161541365.1|2086791_2087919_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MSFALVIQPHDVLLFRDGKPFSAGTDIRARSLFPPTPFTIQGAIRARVLFSSGVSPAAYVSGKTQEAQKLQELIGTPKDSYGKLQLWGPFLANQENDRWVRYFPLPADIVRLSGSYALLQPLKKSPWQSNLPAGLQTPWLRTPERLEEVRGWISEDELGRYLGGVAPGKVYDESEFVEREHRFGIAIERARRTVRESYLYLAEFLRLKEGVAFWVDVEGISETDLGGKTGLLQLGGEARAAYYEVQQAAPDLIPTPPNPLPDRFKVVLLTPAWFSGGWQPQGGNWGQFFYGSVRLVSAIIPRYQPIGGAYVDDRRRRGAFQKPMRRFVPAGSVYFFEHDGTASWTGRPFTETPSGEGNYGQIGFGACAIGKWNYA
>NZ_AP019796.1|WP_161541366.1|2087915_2090783_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MVTRWTRKIVAFLHDPPGKALVLRSVPHTPHAQLAKALQQIALGRSADAHESDRATKADHIASAADRVNFPKGATAYWDQVAPLLTHPLAAGARAHRVQLPAGDLQALDSEVQEEAAQRILQPWVHQLTTQPDKEKCLYLYIWRLLYEELAHKASLKGWMRLLPADTRQPDHPLEQHLSISVAIADALPNPAFLVFSIGPVQEFIAAARRTQDLWMGSWILSYLSWKAMESLADEFGPDVVVFPSLRGQPLCDHWLHKAYGLPCQPALEEIGRPTFPNRFLALLPAKEASEAAQKAEKAVREEWKRLAQEVYNALTSTSILPADDQTKGLWDNQIQGLLEIYWVVFPWPGDDQPPGTAQAKAGKELYEQLCKPPEGEDWEFRRVYETLHKSGQYDPNWGTVWSLLYELADRAFNARKNLRNFEQAEETGDKCTQCGQRAALRSEKLDSRAFWDHVAKELRARGRHEVKPEGKERLCAVCTVKRFVQREVLEQEFGLRGGFPSTSEIAAAPFKKRVLEALQKGRPAVQQALKDFLNIAHPQLATVAQGAMPYLEAQTQSLTGAEAELAKKLLKIDGEWLHVESWTKEHLKEAGATSNPGDIRKAIETLQALYQAVGARPSKYYALLYMDGDHMGRWLSGTHEGLATFGDILHPEVREQLEEDANWHPLLQTRRLITSAVHAAISQSLGRFALRLVPHIVEERSPGRLIYAGGDDVLALVPLEDALAVARELRAAFSGHIRFENGSLQVCLGESVSGYVEWVEWGKEIFLTMGPQATASIGLVFAHHLQPLDLVLQAARRAEQAAKRQYGRNALAVEVLKRSGETVSVGTNWSYEGMPDVVKFLIDVTKRLREGQISGKWPYTVQAEAAALEALPEEAQRAELKRLLKRQAEQELSREEKEAQAEELSKKLVDWVRAMEQPQQNPDPCQADKESPKGFSEMSRWLLVCSFIARGGEV
>NZ_AP019796.1|WP_161541367.1|2090776_2091724_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MLTVRLETVTPLFLAGADPRGKPELRAASIRGALRFWLRALLGGVIGDKDLNALRKAEAAVFGSTDTGASPVVVRIGGEVQFDSYRPLLHNPEKKFTFMGIQPDQAFSLELIPRPPHTQVSPIVLSVTALWLLLGGLGKRSRRGFGTLRLQNEVESFLFTPEAYKDASELETTLRQVIQQAQDQARNLISTLKIAPGTFRIPPDFPVLHSDHTQILFCKYPFATWEKAMMAFWRLLRSHPYRDDRVFGFAGSAGRQASPLHLRIVKIGNKYHLLMTAFRSRFAWSSPNWRKLQDFLSDCCQKWQGTWIMRGTAAW

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Crispr_ID: NZ_AP019796_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_12

2276178-2277152

Orphan

I-A,II-B,III-A

Consensus_repeat	Method
ATTTCAATACCAAAAAGGTGCGATTAAAAC	PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRT

14 spacers

The CRISPR arrays of NZ_AP019796_12

>merge|NZ_AP019796|12|2276178-2277152|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATACCAAAAAGGTGCGATTAAAACTTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCAATTTCAATACCAAAAAGGTGCGATTAAAACCTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGAATTTCAATACCAAAAAGGTGCGATTAAAACTGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAGATTTCAATACCAAAAAGGTGCGATTAAAACGGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCGATTTCAATACCAAAAAGGTGCGATTAAAACCGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCTATTTCAATACCAAAAAGGTGCGATTAAAACGCAATGCGGGACCCAGAACCGATCTGGGATCTCGTAATTTCAATACCAAAAAGGTGCGATTAAAACCCACCACGTCGTGAATCGCCGCCACGGAAGAGACAAATTTCAATACCAAAAAGGTGCGATTAAAACCGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAGATTTCAATACCAAAAAGGTGCGATTAAAACTGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACGATTTCAATACCAAAAAGGTGCGATTAAAACGCGATTACGGCACGACCTACTACTACTGGGTCACGGATTTCAATACCAAAAAGGTGCGATTAAAACCAAGATCCCGGTCCATATGGCTTTGCGGAACGTGCCATTTCAATACCAAAAAGGTGCGATTAAAACGATCGTTAAACCAAACGGGAGGTGCACCATGAAACAATTTCAATACCAAAAAGGTGCGATTAAAACCATGTTACCGCGCCAAGCCCGTCACGACAAGAAAAAATTTCAATACCAAAAAGGTGCGATTAAAACCTGCTCGGCATCAGGGTAGTACACGCCATCCTTCGCAATATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|12|12|2276178-2277152|PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGATCCCGGTCCATATGGCTTTGCGGAACGTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GATCGTTAAACCAAACGGGAGGTGCACCATGAAACA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CATGTTACCGCGCCAAGCCCGTCACGACAAGAAAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCTCGGCATCAGGGTAGTACACGCCATCCTTCGCAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|12|12|2276178-2277152|CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGATCCCGGTCCATATGGCTTTGCGGAACGTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GATCGTTAAACCAAACGGGAGGTGCACCATGAAACA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CATGTTACCGCGCCAAGCCCGTCACGACAAGAAAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCTCGGCATCAGGGTAGTACACGCCATCCTTCGCAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019796|12|9|2276178-2277152|CRT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGATCCCGGTCCATATGGCTTTGCGGAACGTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GATCGTTAAACCAAACGGGAGGTGCACCATGAAACA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CATGTTACCGCGCCAAGCCCGTCACGACAAGAAAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCTCGGCATCAGGGTAGTACACGCCATCCTTCGCAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161541486.1\|2269820_2270996_-\|DUF4143-domain-containing-protein	unknown	unknown	gnl\|CDD\|224292
NZ_AP019796.1\|WP_161541493.1\|2278326_2279292_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_AP019796.1\|WP_161541488.1\|2271299_2272325_+\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|335962
NZ_AP019796.1\|WP_161541496.1\|2281594_2282533_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_AP019796.1\|WP_012844268.1\|2272686_2272941_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_AP019796.1\|WP_161552606.1\|2284801_2285611_-\|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl\|CDD\|143581
NZ_AP019796.1\|WP_161541494.1\|2279295_2280243_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_AP019796.1\|WP_161541489.1\|2272321_2272690_-\|DUF5615-family-PIN-like-protein	unknown	unknown	gnl\|CDD\|375906
NZ_AP019796.1\|WP_161541490.1\|2272966_2274301_-\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|366513
NZ_AP019796.1\|WP_012844264.1\|2267997_2268705_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|132557
NZ_AP019796.1\|WP_161541500.1\|2285752_2288542_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223972
NZ_AP019796.1\|WP_161541484.1\|2266467_2267994_-\|Gldg-family-protein	unknown	unknown	gnl\|CDD\|274627
NZ_AP019796.1\|WP_161541497.1\|2282540_2283686_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_AP019796.1\|WP_161541501.1\|2288642_2290019_-\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|100096
NZ_AP019796.1\|WP_161541485.1\|2268718_2269645_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|132561
NZ_AP019796.1\|WP_161541498.1\|2283692_2284787_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_AP019796.1\|WP_161541492.1\|2277657_2278314_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_AP019796.1\|WP_161541491.1\|2274435_2276103_+\|Zn-dependent-hydrolase	unknown	unknown	gnl\|CDD\|215425
NZ_AP019796.1\|WP_161541495.1\|2280263_2281598_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_AP019796.1\|WP_161541487.1\|2271144_2271309_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161541486.1\|2269820_2270996_-\|DUF4143-domain-containing-protein	gnl\|CDD\|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.66751e-62
NZ_AP019796.1\|WP_161541489.1\|2272321_2272690_-\|DUF5615-family-PIN-like-protein	gnl\|CDD\|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	8.50628e-22
NZ_AP019796.1\|WP_161541488.1\|2271299_2272325_+\|carbohydrate-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	1.7526e-37
NZ_AP019796.1\|WP_161541496.1\|2281594_2282533_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.68332e-105
NZ_AP019796.1\|WP_012844268.1\|2272686_2272941_-\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	4.53993e-24
NZ_AP019796.1\|WP_161552606.1\|2284801_2285611_-\|TerB-family-tellurite-resistance-protein	gnl\|CDD\|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	2.75375e-06
NZ_AP019796.1\|WP_161541494.1\|2279295_2280243_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.85721e-90
NZ_AP019796.1\|WP_161541493.1\|2278326_2279292_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	2.56687e-64
NZ_AP019796.1\|WP_161541490.1\|2272966_2274301_-\|glycoside-hydrolase	gnl\|CDD\|366513	pfam01204, Trehalase, Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.	3.72698e-20
NZ_AP019796.1\|WP_012844264.1\|2267997_2268705_-\|ABC-transporter-permease-subunit	gnl\|CDD\|132557	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.35707e-54
NZ_AP019796.1\|WP_161541484.1\|2266467_2267994_-\|Gldg-family-protein	gnl\|CDD\|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	3.10326e-90
NZ_AP019796.1\|WP_161541497.1\|2282540_2283686_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.74806e-36
NZ_AP019796.1\|WP_161541501.1\|2288642_2290019_-\|phosphoglucosamine-mutase	gnl\|CDD\|100096	cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP019796.1\|WP_161541485.1\|2268718_2269645_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|132561	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.4829e-128
NZ_AP019796.1\|WP_161541498.1\|2283692_2284787_+\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	2.20341e-31
NZ_AP019796.1\|WP_161541492.1\|2277657_2278314_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.23371e-12
NZ_AP019796.1\|WP_161541491.1\|2274435_2276103_+\|Zn-dependent-hydrolase	gnl\|CDD\|215425	PLN02791, PLN02791, Nudix hydrolase homolog.	8.36747e-128
NZ_AP019796.1\|WP_161541495.1\|2280263_2281598_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.62743e-47
NZ_AP019796.1\|WP_161541500.1\|2285752_2288542_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0

>NZ_AP019796.1|WP_161541491.1|2274435_2276103_+|Zn-dependent-hydrolase
MRRLPLLFALLLLPACETPETMPEASLDTVLTVPGASPEAQALLRKYAPFRLEADLSGLSDNQRRMLRLLIDAAREMDAIFKVQAYGNLDSLLATIEDPGLRRFAEINYGPWDRLDGNRPFIEGVGPKPPGANFYPPDMTREEFEAAAAENEALRSLYTMVRRDAQGRLVAIPYHEFFAPHVRRAAELLRQAAELAEDEGLHRYLTLRAEALLTDDYYESDRAWLDMKTNTIDVVIGPIETYEDQLFGYKAAAEAFVLLKDRAWSERLGRYATLLPELQAALPVPDAYKREQPGTDSDLGAYDALYYAGDANAGAKTIAINLPNDERVQLEKGTRRLQLKNVMRAKFEKILLPIADVLIAEDQRAHITFDAFFGNTMFHEVAHGLGIKHTITGRGTVREALRDLYTTMEEGKADVLGLYMVTWLIDRGEWEADPMDHYVTFLAGIFRSIRFGAASAHGRANLIRFNFFKEQGAFTRDAATGTYRVVPERMQTAVNALSEQILHLQGDGDYAATAAFIERYGQMDDTLRADLARIQQAGIPVDIVFVQGPEVLGLE
>NZ_AP019796.1|WP_161541490.1|2272966_2274301_-|glycoside-hydrolase
MSEPVVIDPEALIEQAKAVLRANDVNGIFVKPGTYQYPHQWNWDAALVALGLSHFDRPRAEQEIRSLLKGQWKDGMLPHVVYHNGASDYFPTPDFWQIERSPNAPEGVLTSGIVQPPLLATCVRLMHERAPDREASLAFVREIYPALYRWHRWLRTARDPENTGLVAIVHPWESGTDNAARFVEPMIRVIPTRVPAYQRKDFLHVREDERPIQAEYQRFIYLIDLFRQWGYDQETIYARSPFLVQDTLFNALMYRAQRDLRALAAELGEPTEEFDEWLATTRYAYNARLWSEEHGLYFAYDLRARRVLEENGCATFIPLFAGLASERQARRLVEEHLLNPEEYAPDGTRYYVPSQAKNNLFFEPRRYWRGPVWIIINWMVMEGLRRYGYHELAETIRQHSLELVQKSGFMEYYDPRDGTGCGATGFSWTAALTIEMLAGQPVPA
>NZ_AP019796.1|WP_012844268.1|2272686_2272941_-|DUF433-domain-containing-protein
MKARFPVPGLERITFDPEVMGGRACIRDTRVTVSLILNLLANGMQVHEILEAYPYLEPEDIHQALKYAAWLSEEWVVPLSPETP
>NZ_AP019796.1|WP_161541489.1|2272321_2272690_-|DUF5615-family-PIN-like-protein
MRFLADMGISPHTVRFLREQGYDAVHLRELKGQLLTDASILELARTERRILLTHDLDFGELMAASGARLPTVIVFRLRNMRPENVNRYLMGIIDRFGDQLRAGAMVSVTEAQVRIRSLPLSS
>NZ_AP019796.1|WP_161541488.1|2271299_2272325_+|carbohydrate-porin
MHLTPRTTLFFYGLGNQGGSISARVGDAQGVSNIEAPTSWRLYEAFVEHVTATGRLSVLAGLYDLNSEFDVLPAAGLFINSSFGIGAELAASRPQGPSIFPVTSPGLRVRLGFQRSARYAGYLQAVALDGVPGDPDRPAGTHIVFGRNDGLLLVAEAGALVHPEAPLPDGSPIRLVSRLHEHPHHHKLALGAWYYTARFRWLDADRTQRGNAGVYLLAESRLYREDPRTLWAFLRVGLAHPRVNRFGAYTGGGFSGRGWVPGRPADRMGLAVAAAHNSSAYRRLQRQQGTPVHRTEWVFEGTYLLALSTALRLQFDLQWVLHPDTRAGSVLVGGLRLLWSP
>NZ_AP019796.1|WP_161541487.1|2271144_2271309_+|hypothetical-protein
MLALWLGGWLLAADTSRFTSELAVAYTVDVMSPLAGASVRPVWMDNVDVTLACT
>NZ_AP019796.1|WP_161541486.1|2269820_2270996_-|DUF4143-domain-containing-protein
MIERHLLSEVLQGLQEVPAVCLLGPRQAGKTTLALRVAELIGGVYLDLESPRDLAKLSDPEAYLLLHLGELVILDEVHRVPGLFPILRGLIDQARRRGKRAGLYLLLGSASLDLLRQSGESLAGRVRYLELTPFFVLEPTDRPLEALWLRGGFPESLLAETELQSFRWRQDFIRTYLEREIPRFGTRLPAEMLRRLWVMLAHRQGGTLNAAELARNLGIDVRTVNRYLDLLVDLFLVRRLPPWHANVEKRLVRSPRLYIRDSGLLHALLDIIDMETLLSHPVVGASWEGFVIENLIASAPTGTTFYFYRTAGGAEIDLLIVWPDGRRWAVEVKRSLSPRPDRGFYAACEDVRPEKQFIVYPGSDRFPVGQGIEALPLIELARLLQAQKHTA
>NZ_AP019796.1|WP_161541485.1|2268718_2269645_-|ATP-binding-cassette-domain-containing-protein
MIEVRELTKRYGSEVAVDRISFTVRSGEVLGFLGPNGAGKTTTMKVITCYLPPTEGTVLVDGLDVRHDSLAIRQKIGYLPENTPLYPDMVTYDYLEFMAAMRGLDGAARRRRLAEVIEVCGLGDVLTKRIDALSKGYRQRVGLAQAMVHDPPILILDEPTSGLDPNQIVEIRSLIKTLGREKTVILSTHILPEVQASCDRVLIIHRGRIVADGTPDELQSTHGGQRILFGVQAPEPEVRSALERLDGVRVEEARTESDSTLLLRLSADGQKDLRPELFRLAVERGWTLTELHRERVDLEEVFRQLTMN
>NZ_AP019796.1|WP_012844264.1|2267997_2268705_-|ABC-transporter-permease-subunit
MREVWILTRRELRAFFDSPSAYIVLSVFLLITGWFFGNSLFVENVASLRSVFDLAPVLFMFFIPALTMGTFAEERRAGTIELLLTLPVRDGQVIAAKLLSVVIVLLVALALTGVYVLTLAVLGDPDNGATLGGYLGLALLGLSCSALGLLASSLTRNQIVAFILGFAMIFGLYLLDKVTIFVPGWLAPILEYLSIDFHYRNLMRGVIDSRDVLYYLSLTAFAGLLTAYHLARRPE
>NZ_AP019796.1|WP_161541484.1|2266467_2267994_-|Gldg-family-protein
MQRNWTTRTTLLLVGLILVVLNLIGLNVFFRIDLTDDRVYSLSEASIETVRSLDDPVTVRVFFTADLPAPYSSYRRFLRDKLDEYRAYGGNKFQYEFLDPGSDESLQQEAARYNIPPVQVQVIENDNLQIKNAYMGLVVEYAGKRETIPVIEDLSTLEYDLTSAIRKLTRDRLPVAGILTGHGEPGRTAMETFYRALERNYEVRTVSVKDSTLDPRPDVLFIIAPTDTFPEAHLKAIDRYLMEGGRVAVLLNRINANLQFGFASEQKTGLEDLLAHYGAVVRPDLVMDRQSSVVTLQRTVGFFRVAQMVEYPFFPIATRFNPEHPMVSRLREVFFYYVSSIDTSAALPEGVERIPLVYSTPQSATQQGFFTVQPAMLPDPENFRDGPYVLAVALHGTFPSAYDSTRIGQPARLVVVGDGDLVNEQRYGGQLPPGNLAFVLNIADWLGQDEALLAIRTKSITPRALEPVSESLRPFIKYANILGPVVLVVLFGLIRWRIRRQRQIVLTT
>NZ_AP019796.1|WP_161541492.1|2277657_2278314_+|TetR-family-transcriptional-regulator
MVSSETTPAAVRARILEAARRRFFREGYARVTMDELARELGMSKKTLYQHFPTKAALAAAVMEAFRAQVAEGLGRIFEDHTLSLPERLARAFAEAVRHLRQIEKPFLEDLARFLPDVWAETERFRSETIARLLGGALREGRAAGFIRTDVPVEIMLRSFQAVAERLVTPSALMELPYTLPEMIRLVIQLLFEGMLTDAARGDFRKALDAIASEGNLTP
>NZ_AP019796.1|WP_161541493.1|2278326_2279292_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRTLLLSAMLLSGLLAGCRAARTDVLEVSGTIEATEVQLAARTTGEIVQFFVDEGDRVARGQPLVCQDTTQLALQLRQAEADVAAARANLALLEAGARSEDLEQAEARLQQAETRLEQARRDAARLEALHAQGSATDRQLEDARLQLRLAEAEYRAAQAQLEKLRHLARPEELAVARARVAQAEARRDLLRRQLDDACLEAPIDGIVSRRVADPGELAAPGSVLLTLVRLDTVYVQLYIPEPLIGAVQYGQPVTVRVDTWPDRTFEGRVTYISPEAEFTPRNVQTKEDRTRLVFRIKVTLPNPEGLLKPGMPADATLQPGA
>NZ_AP019796.1|WP_161541494.1|2279295_2280243_+|ATP-binding-cassette-domain-containing-protein
MTPPIELRAVTKRFGPITALAGVSLSVSEGEMFGLVGPDGAGKTTLLRLVAGIARADEGVVRVLGHDLTTEARRIRPFIGYMAQRFSLYGDLTVEENLRFFARLHGTGTDRAWQERLLEMTGLAPFRTRLADYLSGGMKQKLALICTLVYRPRLLLLDEPTTGVDPVARRQFWELLVEFQQEGLTIVLATPYLDEAERCRRVALLHQGRILALDTPEALRASLPGRLFELTATPVREAARQLRAWLEAHRVQLIGNRIHLLLDHDDELTPLLGRLEAEGTVRVHDCQPIAPTLENVFLAYLTEQSTPSKQIDDVR
>NZ_AP019796.1|WP_161541495.1|2280263_2281598_+|TolC-family-protein
MLRWLPGLLLGCSLALALQAQPVQLTLSEAIQRGLRTHPDLAAAEAAVAAAQARIGQARAALQPRLQFSAGYQRLSEITPFAITMPLPGAEPIEITPNIPNQYQLQLSLQQPLFQGGRLRAQLEAARQEAAAAVAEQHARREALAYRIATAYWQHVEAEALARAAEENVRRLEAHLQDARNRQAQGLLLESEVLDVEVALEQARLEALRQRQAARLTAVTLSSLVGLPPDTPIRLSDRPDTALRPVPPLDSLRALALRRRPDLAALRHTIARADALQSMARAGWWPQVALVGRYLYARPNPRIIPLQDRFEGTWEVGLSLTLDLWNGLRTHHQVAEATALRRRAEAQEAATLRALDVALAQARLGVEQAYERLRLARLVVRQAEARYALVRDQFAQGLRTSSDLLDAETALAQARAREIQARTACALAWLALHQATGTLTEHLP
>NZ_AP019796.1|WP_161541496.1|2281594_2282533_+|ATP-binding-cassette-domain-containing-protein
MSIPAIDVRDLTRRFGSFTAVDHVTFQVEAGEIFGFLGANGAGKSTTIRMLCGLLPPSEGTARVAGFDVAREPYRVRQAIGYMAQKFSLYEDLTGLENLYFFGTAYGLTGRRLEARIREVTARVGLNGQERRLVRELPTGWRQRLALAGALLHEPSVVFLDEPTSGVDPLARRRFWDLIAELAAEGTTVFVTTHYLDEAEYCNRLGLIHNGRLIALGAPEALKARYLIRPLYELEATPLRAALETLRRMPEVFEADPFGSRIHVTLQDRSLDPELLVRRLREAGLTVAGIRPIVPTLEDVFLHLIEHPPTET
>NZ_AP019796.1|WP_161541497.1|2282540_2283686_+|ABC-transporter-permease
MAALRMIATLFVKEFTQIRRDPLSLGMLIALPAFLLILFGYALTFDVRNLSLGVCDQDGSAASRELIRRFAITEYFDLKRQVDDPRALTRLIDHEVIRVGLVIPPDFEERLEAGRPAPVQFLVDGTNATIASAVTGYADAIVRAFSGQVVLEQMLRAGHRPPPAAVSVEARIWYNPELESARFLLPGLIAFLLMVATVVATSLSVTRERERGTMEQLVLAPLEPYQLVLGKTLPYLLVAIGSTVLILLVGRLLFDVEVRGDLLVLAFVVLAYLLAGLGQGLLISTVAPSQQVAFQIAIISTLLPTFILSGFVFPIYNMPPVIQALTYLVPARYFLVALRGVMLKGTGLAVFWPDVLLLLLFAGLMLTLSSIRLRRLFQHLM
>NZ_AP019796.1|WP_161541498.1|2283692_2284787_+|ABC-transporter-permease
MEQVLAFLRKEFRQLRRDPRMLFLLIVPPIVQLVLLGYAANLDVRHVPLVVCDPVPSATSRDLVQRLVASTYFDLVGYEPDARRVGEWLDRGEATVALVFPPDFGKEVAQGTTASVQLLVDGSETNTATVALSYASQIIQHALGVGAVSAGVVPELRVWFNPALSSRWFIIPGLVGLLLTVMTTVLTALALVKEKETGTLEQLLVTPLRPATVLLGKLVPFLLIGLLDVLLVVLVATLWFQVPLRGSIPLLFGCALLFLLNTLGLGLLISTLSRTQQQALIGAAFFALMPMIILSGFVFPIESMPPVIQAVTYIVPLRYFLTIVRGIFLKGVGISALWEEMLALLVLGLLLFGLSTWRFRRQLH
>NZ_AP019796.1|WP_161552606.1|2284801_2285611_-|TerB-family-tellurite-resistance-protein
MSETRCMAGRLQELALLYLIAASREGLPVGDGRLEAVIDQLQARCPTIPPDQLRALVLEAFDVLLAAEDPEALLQATLEAVEPHLSQAQRQAVLHDLLRIVEADGIVMESERQLLELVARRWGLEPPYERVRVLDPGQEGIPEVLIHLALLYLVLAHGVDHELTRQERQIIVRKLRAWCPDLTDQQLAAVLQEAIDRYAEGLTDAELRASAEAIKMALTPAQRLTAFHDLVQIANADGTFLDTEEDLLNELVDLWELGPHVDAPELSPA
>NZ_AP019796.1|WP_161541500.1|2285752_2288542_-|GNAT-family-N-acetyltransferase
MEARPDVMQHDPSHELFLPRRLHLDAIFRPRSVAVIGASERPGSVGRTLLWNLISNPFGGTVYPVNPKRTNVLGIRAYPSVKDIPEPVDLAVIATPAPTVPGVVQECVEAGVKGAVIISAGFKEIGEEGRRLEEQILTIARKGGMRIIGPNCLGVMRPVTGLNATFASTMARPGTVGFISQSGALLTSILDWSLEENVGFSAFISIGSMLDVGWGDLIYYLGSDPYTKSIILYMESIGDARSFLSAAREVALQKPIIVIKAGRTEEAARAALSHTGSLAGSDEVLSAAFRRTGVLRVDSIADLFYMAEVLAKQPRPEGPRLTILTNAGGAGVLATDALVQGGGQLAELSEETKKKLDEFLPPHWSHGNPVDILGDADPERYAKALEVTLADENSDGLLVILTPQAMTDPTQTAEQLRRFAQSRKPILASWMGGVEVAAGKKILNRAGIPTFQYPDTAVRVFNYMWRYSYNLRALYETPSLPDDEIDGGPDRERAQQIIEQVRREGRTLLTEYEAKQVLEAYCLPVTPTRLARTADEAVAAAEELGYPVVLKLHSLKITHKTDVGGVQLNLDSPEAVRRAFETIRRNLEERGQADAFDGVTVQPMVRARDGYELIIGSTIDPQFGPVLLFGAGGTLVEVYRDRALGLPPLNTTLARRMMEQTKVYRALQGVRGRPPVNLDRLEKLMVRFSQLVVEQPWIREIDVNPLLAAPDQIVALDARIVLHPPDLREEELPRPAIRPYPRQYMSTWRLKDGTPVLIRPIRPEDEPLLVEFHHKLSERSVYLRYASLLKLSQRVAHERLARLCFIDYDREMALVAERRSPETGRPEILAVARLTKIYGTNDGEFAMLVRDDVQGKGLGTELLRRLIQIGEAEGLERIVADILVQNHAMQHVCRKLGFRIIRSDDPADPMVKAVRVLRVPVERESLAKA
>NZ_AP019796.1|WP_161541501.1|2288642_2290019_-|phosphoglucosamine-mutase
MAEKQVLIASISGIRGIFGAGLGPEELVRYAAAYGAWLRKQIGGRRPRVVVGRDGRVTGPVCARIVTATLQSVGCDVLDAGLATTPTVEVAVMAAQADGGIVLSASHNPAEWNALKLLNRHGEFLTPDEAREVLTLAEAGAMPLVTWEALGTYEARDFLDAHIQRILALDFMDPERIRRRQFRVVVDGINSVGAVALPVLLRRLGVAEVLLLNGEPNGRFAHPPEPLPEHLQETIRAVADTGADLGLVVDPDADRLALIADGGEYVSEELTQVIAADFLWRFREGPFVTNLSSSRAIEDVAARYGMPVYRAAVGEINVVQKMKEVGAILGGEGNGGVILPDVHYGRDALVGAAMVLQHLANLEQSLSELVATLPRYAIVKHKLPLDNLDADQALQRLAGRYAHARITTIDGLKIDLDEGWVHLRKSNTEPILRIYAEARTPDEAAALVQRFVDELRSV

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Crispr_ID: NZ_AP019796_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_13

3047818-3047914

Orphan

Consensus_repeat	Method
CGCTACAACGCGCCATGAAGACGATCGAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP019796_13

>merge|NZ_AP019796|13|3047818-3047914|CRISPRCasFinder
CGCTACAACGCGCCATGAAGACGATCGAACTTTATCTCAGAAACAAATATGGATCACCGGAAAAAACGCTACAACGCGCCATGAAGACGATCGAACT

>NZ_AP019796|13|13|3047818-3047914|CRISPRCasFinder
CGCTACAACGCGCCATGAAGACGATCGAACT	TTATCTCAGAAACAAATATGGATCACCGGAAAAAA
CGCTACAACGCGCCATGAAGACGATCGAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_161552712.1\|3046657_3047371_-\|thiaminase-II	unknown	unknown	gnl\|CDD\|381701
NZ_AP019796.1\|WP_161552715.1\|3054588_3055866_-\|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl\|CDD\|223489
NZ_AP019796.1\|WP_161552714.1\|3053329_3054505_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NZ_AP019796.1\|WP_161552711.1\|3044659_3045070_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350250
NZ_AP019796.1\|WP_161542053.1\|3037401_3039123_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|379862
NZ_AP019796.1\|WP_161552716.1\|3055838_3058079_-\|DUF4861-family-protein	unknown	unknown	gnl\|CDD\|379779
NZ_AP019796.1\|WP_161552713.1\|3050086_3052729_+\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_AP019796.1\|WP_161542052.1\|3036114_3037398_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_AP019796.1\|WP_014067919.1\|3045412_3046642_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_AP019796.1\|WP_161542050.1\|3035065_3035392_+\|cation-transporter	unknown	unknown	gnl\|CDD\|225328
NZ_AP019796.1\|WP_161552840.1\|3058181_3059363_-\|glycoside-hydrolase-family-88-protein	unknown	unknown	gnl\|CDD\|369381
NZ_AP019796.1\|WP_014067918.1\|3045085_3045346_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|198034
NZ_AP019796.1\|WP_161552710.1\|3043914_3044667_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|377032
NZ_AP019796.1\|WP_161552709.1\|3035529_3036018_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_014067924.1\|3052927_3053293_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552718.1\|3062078_3065093_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|273804
NZ_AP019796.1\|WP_161552717.1\|3059465_3061196_-\|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl\|CDD\|372761
NZ_AP019796.1\|WP_161542054.1\|3039138_3042303_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl\|CDD\|226220
NZ_AP019796.1\|WP_161552719.1\|3065919_3066552_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133000
NZ_AP019796.1\|WP_012844960.1\|3065579_3065939_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_161552712.1\|3046657_3047371_-\|thiaminase-II	gnl\|CDD\|381701	cd19366, TenA_C_BhTenA-like, TenA_C proteins similar to Bacillus halodurans TenA. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Bacillus halodurans TenA which participates in a salvage pathway where the thiamine degradation product 2-methyl-4-formylamino-5-aminomethylpyrimidine (formylamino-HMP) is hydrolyzed first to amino-HMP by the YlmB protein, and the amino-HMP is then hydrolyzed by TenA to produce HMP. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.	5.38251e-69
NZ_AP019796.1\|WP_161552715.1\|3054588_3055866_-\|prolyl-oligopeptidase-family-serine-peptidase	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	5.38115e-07
NZ_AP019796.1\|WP_161552714.1\|3053329_3054505_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	9.34562e-81
NZ_AP019796.1\|WP_161552711.1\|3044659_3045070_-\|PIN-domain-containing-protein	gnl\|CDD\|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	1.46638e-37
NZ_AP019796.1\|WP_161542053.1\|3037401_3039123_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	5.4786e-102
NZ_AP019796.1\|WP_161552716.1\|3055838_3058079_-\|DUF4861-family-protein	gnl\|CDD\|379779	pfam16153, DUF4861, Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding.	1.03453e-121
NZ_AP019796.1\|WP_161552713.1\|3050086_3052729_+\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_AP019796.1\|WP_161542052.1\|3036114_3037398_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.5625e-25
NZ_AP019796.1\|WP_014067919.1\|3045412_3046642_-\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.59739e-44
NZ_AP019796.1\|WP_161542050.1\|3035065_3035392_+\|cation-transporter	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	4.40171e-17
NZ_AP019796.1\|WP_161552840.1\|3058181_3059363_-\|glycoside-hydrolase-family-88-protein	gnl\|CDD\|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	2.42073e-124
NZ_AP019796.1\|WP_014067918.1\|3045085_3045346_-\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	1.31334e-10
NZ_AP019796.1\|WP_161552710.1\|3043914_3044667_+\|PepSY-domain-containing-protein	gnl\|CDD\|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	7.67744e-06
NZ_AP019796.1\|WP_161552718.1\|3062078_3065093_-\|TonB-dependent-receptor	gnl\|CDD\|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	1.01329e-96
NZ_AP019796.1\|WP_161552717.1\|3059465_3061196_-\|T9SS-type-A-sorting-domain-containing-protein	gnl\|CDD\|372761	pfam13860, FlgD_ig, FlgD Ig-like domain. This domains has an immunoglobulin like beta sandwich fold. It is found in the FlgD protein the flagellar hook capping protein. THe structure for this domain shows that it is inserted within a TUDOR like beta barrel domain.	5.69291e-08
NZ_AP019796.1\|WP_161542054.1\|3039138_3042303_+\|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl\|CDD\|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019796.1\|WP_161552719.1\|3065919_3066552_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	1.19202e-57

>NZ_AP019796.1|WP_161552712.1|3046657_3047371_-|thiaminase-II
MQQEAPVQERPFTVPPFAQECLEAAADAWGASFRHPFVRALAEGTLDAERFRFYQMQDARYLEAFADACSLIATRCVRPDDKLWFIDAARLALVVERELHAGYGKKLGYTLEDVARIELTPNNRAYQDHMIATAVRGTLVEAVAAITPCPWLYVELGQHLARELGTIPDTHPYADWLRMYSNPEFNTYMDNLLERLERFAREADGAARARAKEAFRTSVRYEWMFWQQAWEQQRWPV
>NZ_AP019796.1|WP_014067919.1|3045412_3046642_-|MFS-transporter
METVPVRLGLRANWQQFALLVVVNAFVGAMVGMERAILPLLAEQEFGLASRVATLSFVASFGLTKALANLLAGRLGDRIGRRRVLLAGWLAGLPVPWLLMWAPSWAWVVAANVLLGLNQGLAWSMTVIMKIDLVGPRQRGLAMGLNEAAGYLAVSLAALATGYVAATYGLRPQPFYLGVAFSAAGLLLSALFVRETQHHADLEARQHFDVSEPVPSFREAFVRTSWRDRRLFAVCQAGLVNNLNDGMAWGLFPLFFAALGYGLTQIGWLAALYPAVWGLGQLVTGALSDRIGRRPLIVGGMLLQGVSIGAMLFSEAFAWQAAAMVGLGIGTAMVYPTLLAVIGDVAHPAWRSTAVGVYRLWRDGGYVVGALLAGVLADLLSISWAIGAIAVLTLLSGMVAAAILAETRP
>NZ_AP019796.1|WP_014067918.1|3045085_3045346_-|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MTIVRVSKKGRVTLPKAVREHLQLKEGDPVQFEIRSDGTVILHRAAESGYAARGTLHAFAPKKPVSVEEMDQAIGGEVTRQLRTST
>NZ_AP019796.1|WP_161552711.1|3044659_3045070_-|PIN-domain-containing-protein
MPQFSGGLDTNVVVWYLVEDDPIQAEAARQYIEEQCSVDRPALVHPVTLFELVWVLRAAYNVPRQRIAEAIDALLDTPTLYIMEAELVRRALQLFRSSSVDFADAYQHVAYQQAGAAGLVTFDRRAGRLTGAQVLT
>NZ_AP019796.1|WP_161552710.1|3043914_3044667_+|PepSY-domain-containing-protein
MRLPVRTIRKLHRYLGLIIGIQLLLWTGSGLFFSLNPIEKVRGERLMAPPATLSPDDTLLTTPTRALKALRTQFPTAEVLQVTLRPLLDRPVYEITFRHEGRLRFALVDARTGHLRPPITEAEAMAIARADFIPEAPVAAVEYLTEAPPGSEFRGSPLPVYRVVFDHPTGTRIYVAAENGRVTARRNDTWRWFDFFWMFHIMDYRTRDNFNHLLLQSFSLFGLLTVLSGFVLWAVTSPTLRGRRRKSPPT
>NZ_AP019796.1|WP_161542054.1|3039138_3042303_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MIERLITWSAHNRLLILTLTLLISALGLWATLNTPIDAIPDLSDAQVIIRTEYPGQAPQIVEAQITYPLATAMLAVPGARTVRGYSMFGTSFVYVIFEDGTDLYWARSRVLEYLNQVTLPEGAQVSLGPDATGVGWVFQYSLIDTTGRHDLADLRALQDFFLKYELQSIEGVSEVATVGGFLKQYQVVVDPQKLLAYGISIDQVRQAIAHANQEVGARLLELGEREFLVRIPGYLQGIDDLRQTPLKAQNGTVITLDDVARLQVGPELRRGISERDGEGEVVSGIVVMRYGENALRVIERVKARLAELQASLPEGVKVVVDYDRSRLIREAVHTATIKLWQELAVVALIVLVFLLHVRSAFVALVAVPVGVLISLLIMYLLDINANIMSLGGIAVAIGVMVDASVVMVENAHRHLERLRAQHNRPLRHSEHMQAVLEAAREAGPSLFFSLLVVTLSFLPVFALQNIEGRLFRPLALTKTFAMAAASLLAVTLVPALMVVFVRGKIRPAAQNPLTRLLTQMYQPVIRYALRHPWQVIVGSLLLLGLTLLPVQRLLWGRVAIPFPQIGSEFMPPLNEGDLLYMPTTLPGLSPQKAKELLQLSNRIIKSFPEVASVTGKAGRAETATDPASLSMFETIIQLKDPREWRPGVTLDRLIEEMNRALQIPGVTNAWTMPIKNRTDMLATGMRTPLGIKLMGPELATLDRLGTTLESLLRNMPGTRSVYAERATGGSYLNIVVNRAEAARYGLTIGKVLDVAQAAIGGLHVTTTIEGLERYPVLVRYPQDLRDNLPALRQVLVPTPSGAQVPLGQLAHFELTEGPPMIRSENARPTVWVYIDLAPGVDIGTYVQQAQQLLARELSLPPGYALVWSGQFEYMERANRRLQILGPLTLGLVFLILMLHFGNLREPLMLLSTLPFAAIGAVWLMVALAFDMSVAVAVGYIGVVGLAVETGVVMLTFLDEAVRRYRQAGQLSTIEQLRAAIEEGALLRLRPLLMTVSTTLIGLLPIMFGTETGAEVMKRIAAPMVGGLFTAAALTLVVLPALYLLVERYRWQRRT
>NZ_AP019796.1|WP_161542053.1|3037401_3039123_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRPRILLVSSLLGLLLIAYLARSLWRSDSSATPAPADTAMATAPATGGLAAFDKNGDGIVYQDPMHPWIVQDAPGKAPDCGMDLVPVSVHEGMDMSDEGTVRIDPVVLQNTGVRLTTVEVAPLAPTVRATARLEVNEQQLVAVSPKIEGWVERLYVDYEGARVRKGEPLLEIYSPALVSTQEEYLLALRNVQQLAGTPAEADARRLLEAARRRLQFWDITDEQIRQLEATGQPRKTLTLYAPASGTVLEKHVVEGQQIRSGQTLFVLADLSTLWLQVDVYEHDLSWIKPGITAEITLPYDPTVRLQGRVDYMYDTLNPETRTARARIVVPNPGLRLKPGMYALATLQGQPTPPRPRIPTEALVRYGAEAWVILALGEGRFRPVRVQPGLEAQGYVQILEGLEGGEQIVARAQFLIDSEARLKQALAAFMGGHQHGATPAPETQLQPSPRAPEHQEHGTSPAPKTQPQPLPRMPEHQGHSANQDTTVVSLRIDANGFVPSRIEVPSGRPVRLTVTRTTDQTCATAIQFPELGIGPVDLPLHQPVTLTFTPARAGAYLFTCGMNMLKGTLLVHAN
>NZ_AP019796.1|WP_161542052.1|3036114_3037398_+|TolC-family-protein
MHRRYFVLISLFFILTIPARAQRPDTLLSLSALLQEALQANPALQAARLQAAARATRPTQVGALPDPSFEAGYRPLAIGDVEGLAPASALLMQRVPFPGKLGLEAEAARLEAEATAREADALALRLAYALRTTYYELYRLQETRRLIEDFQARLRAFAEAAAVRYEVGQGSQAAVLRVQLEQHRLSRQLLDLQGAWRARYAQLIQLTGRTDLPDTARLAPPEPPTLLPSIPLAEAFRRHPEALALRIREDRARTLIRRARREYWPDFVVGVGLMDMMRMNQPVAPLSALRDRFAIRVGVVLPLQRARRSARVEEARLEARTLASRYRDLRNLFESRWRALEARFAADRANLALLEQTLIPEARTTREALLSAYTTGQASYLDLLDAERALFELERQRVDTITRLLVTQAEAEQLLGLLPENINQTGE
>NZ_AP019796.1|WP_161552709.1|3035529_3036018_+|hypothetical-protein
MSRWFQYGIQSIAAGLAALLLTGTLHLLTPACAMPIRDVTPPVACATMPDIQAHPNAPTSEPVPCCNEEQPLLSTRQPVSSCCNALGTAKSRLPVSTPRPLRPDRARPCARKARLPCCNALGTAKSRLPVSTPRPLRAPAASPILTVTPPVPLHVQFAVLLI
>NZ_AP019796.1|WP_161542050.1|3035065_3035392_+|cation-transporter
MDTTAWIVTLIGLAAMAWVVWYFWLSEPKRQPATQPEKTAMKTQETFQIEGMSCQHCVHAVTSALKKLPGVEVQSVEIGRATVAYDPAQVSRDQLKAAIEAEGYTVVS
>NZ_AP019796.1|WP_161552713.1|3050086_3052729_+|ATP-dependent-chaperone-ClpB
MNLQKFTVKAQEAVQRALEIAAQKNHQAIEPPHLLKALLSEPQGTAVSILKRLGASLELLNTKTDQALAKLPVVHGASVSGQYVGNELKKVFDRALAEAGLLKDEYVSTEHLLIALAESQTDVGQALREQGVTKEKILNVLKDVRGAQRVTDPHAEERYEALQRYGRDLTELARKGKLDPVIGRDEEIRRVLQILSRRMKNNPVLVGEAGVGKTAIVEGLALRIVQGDVPESLKDRRIVALDMGALLAGAKYRGEFEERLKAVVREAAASEGQVILFIDELHTVVGAGAAEGAVDAANILKPALARGEIRVIGATTLDEYRKYIEKDKALERRFQPVLVEEPSVEDTISILRGIKDRYEVHHGVRITDGALIAAAELSHRYITDRHLPDKAIDLIDEAAARLRIEIDSMPEELDQLERQIRQLEIEREAVKRDNDQEKLKAINEQLANLEEQRRALRARWQQEKELIQRIRSIKEEIEQLRIESEQLERQGEYGRVAEIRYGRIPELEKQLKEAQQQLEEVQKDGALLKEEVTAEDIAEIVARWTGIPVAKLLESEREKLLRLEEELSKRVVGQPEAISAVANAVRRGRAGLQEPNRPIGSFIFLGSTGVGKTELAKALAEALFNDENAMIRIDMSEYQERHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDNKGRTADFRNTIIIMTSNLGSELIRERIDAFGGEVPPEVYERMREEILQLLRQRLRPEFLNRIDEIIVFRPLGHEEIRKIVEIQFARIQQLAARSHKLKLELTDAAKDWLAGRGFDPVFGARPLKRVMQREITNKLAEEILAGFFTDGDTIRIDVAPDGSGLIFEKIAQVEAEPAGTA
>NZ_AP019796.1|WP_014067924.1|3052927_3053293_+|hypothetical-protein
MRMLKSLFALLLIGMLSSGLSPNAAQAHPKRVVKVLPRGHVVVHAGKVRYHYHAGVFYRPVRGGFVVVRAPVGAIVPVLPVGYRVVHVHGRVYYCHNGVYYRPIWHRGRRAYLVVDLHLDL
>NZ_AP019796.1|WP_161552714.1|3053329_3054505_-|chromate-efflux-transporter
MSTSPSGALREVAGLFLKLGLIAFGGPAAHIAMMEEECVVRRRWVSRQHFLDLVGATNLIPGPNSTEMAMHLGYERAGWRGLVVAGVCFILPAALITGLLGWLYVRFGNVPEMAPLLQGIKPAVLAVILGAVWRIGRQAVRGVRLAVIGLAVAGATGAGLNEVLALLGGGVLGMFWLRIAPTPERSAAGSGGLALWPSLKDSLGVALGTGGAGAAAGVSLGKLFLFFLKVGAVLYGSGYVLVAFLEGGLVQDYGWLTQAQLLDAVAIGQFTPGPVLTTATFIGYVIAGWPGAVAATAGIFLPSFLFVGVLNPLIPKLRASRWLSAFLDAVNVSAVALMAVVIVELGRATLLSWPAWAIALTAAVATLRFRVNAAWLVLGGALAGWLLALWA
>NZ_AP019796.1|WP_161552715.1|3054588_3055866_-|prolyl-oligopeptidase-family-serine-peptidase
MDTLARPRLKTVGLDRRTFLEALLGTAALGWRRWPASVAGEAPLHDDAAGSVLGAYGDWAAALAEDPPRLSLRRQETVDLAAWQRRARARVMALLGMPEVGAAPHAEVVARVAHDGLIIEDLRWQLPFGPPTRAYLLRPADASGPLPGVLALHDHGGDKFFGREKIVDPGTRHPLMVAHQEKLYDGRAWANELARRGYVVLVPDVMAFGSRRIRLADVPPRVRRGLPAREPETAEEIRAYNEWASWHEHMVARSLLAAGTTWPGVLLAELRGALEVLCRRPEVDARRVGCAGLSGGGWQTVLLAGMDDRIRCAVVTCMLTTWRDLARNRSYTHTWMLYIPLLARDLDYPELLGLRVPAPALVQCGRRDPLFTLPEMERAVQIMQEVYRRAGAPAHFQGLFYDEGHRFNRSMQEDAFAWLDRWLRG
>NZ_AP019796.1|WP_161552716.1|3055838_3058079_-|DUF4861-family-protein
MRWCRILLLGLLPLLGGAVETPEAVRVRVENPSDVARPDELVELAWAPLAERLPALTPEQVRVRDEASGRSVPHQVVDNDGDGRPDVLLFLVNLWPREARTYRVEAAAPETTFAARTFAYHEPQRDDVAWESDRVAYRTYGQGLWQLESLVSSGIDVWLKRVRDLVIARWYAKGHDAYHIDTGEGADFFSVGQSLGAGGTAIWHEGRLFPARNFKSYRILAAGPLRAIVELHYEPWEVGGRRVSEVRRITIDAGQYLFREEVTFRSADSEPLTYVIGLVKREGVTGAWKQRDDWAWLSVWGPVERKNGGHGELGTAVLMPGDRLEAVRETNDHYLLLGRMRPGETVVHYAGAGWTAAGDFRQVEDWWAYLDRFVQRLREPLRVAILTPSTGALRTAPDTYTYAAVVDPAYVGPEGARVDGVRRYRTIGRALADVPADNDAPYVIFVRRGRYHEKLSIDRPFVYLIGEDRETTVLSYDDVAGGPCADSPLRRALLARWQAENRSAQPRQPDRCGTRGSFTLRIAAPAVRVAHLTVENAFDYPAYQDSLRDLQAVAVLIDREADRTVFYDCVIRGYQDTLFVEGNRSYFRNCTILGHVDFIFGGGTAVFEACDLISRDRGRPNNGYVVAPSTPRSRPYGLIFHRCRLLKESPAMAPASVWLGRPWHPSNQPGLVSSNAVFLHCYMDDHIRPEGWTEMHGVDPMGERLFEYGSSGPGAHPDRPQLTAAEAALYAPAHVLAGWTPWRDLV
>NZ_AP019796.1|WP_161552840.1|3058181_3059363_-|glycoside-hydrolase-family-88-protein
MRWYGRILGIGLGCLLGLIAQAQPPDVRPWSVRMAESVMRQKPVLSERWHYEVGVMLRAFEELWLRTGESRYFEYIRANIDRFVTPEGTIRTYEREEYNLDQINTGKLLFLLYEQTGEERYRRAIDTLRDQLRHHPRTSEGGFWHKKIYPYQLWLDGVYMMGPFLVRYGVTFGDPEAIDETTHEILLVARYLRDPRTGLYYHGWDEKRQQIWADSITGRSANFWGRGMGWYAMALVDVLDWLPADHPDRPAVIRILQDLAEAVARVQDPVTGLWYQVLDQPAYPGNYLEASASSMFVYALAKGVRKGYLSAKYLEVARRGYRGLVKQLVSVDPDGTVHLNQICAVAGLGGPRQRDGSIEYYLSEPIVSDDPKGVGPFILASLEIEAFEGGALH
>NZ_AP019796.1|WP_161552717.1|3059465_3061196_-|T9SS-type-A-sorting-domain-containing-protein
MTSSAWIGLLVLLLFGAANSRAQELIVEPFNVSGQYLNEVIAGDTTATGERNDPNRVYVLRRNGVYLVNDDIIVRGFDLRLMTEEGEGEKAIIYPVVNTQTGTFAADPIIRMEGNVWIKDVVLVGYVDADPNEVVNIGSTIIRTTSPGYDLILDGVVMSNTRGQHIRTEAAARVIRITNTIFANMGDLGRSNFGAGKAIDLRDTSVDTLFIQNCTFVNFQDRIIRHRSSTAPINNLIFDHNTILNGMSYHGTLALGWVGKSVRITNNLFLDSFVLGADTSDASRQAEFDEHGELYPNGKPRMIWIFSVPNDTTQWVVSNNYWAVSDSVEAFYAKYGDGAGDDGNPDNGTDGDNDIIGPGAPLSYHINSRLGADSVNAFIELEDLQVANRPYISKMLRMAEWYRTQTGRTKSTTSFVRALHDFDRKPVTYFMREFDASYPTDSPAYTGAAKGFPAGDLNWFPDKKAEWELTTIERQPGNLPVTAFRLHQNYPNPFTRETRITYTLPEPATVTLRVFNLLGQEVARLADGVRQAAGVYTATWDGMDLLGRKAAPGVYFYRLEAGGTVLTRKMLLLPAN
>NZ_AP019796.1|WP_161552718.1|3062078_3065093_-|TonB-dependent-receptor
MKNWWLALSLTLGALTAVPAALAQGTVYGVVTDSLTGEALPGANVYLVGTGKGSATDLEGRYRITGIAPGTYTLRVSYLSYQTRELPLRIQDGETIVLNIALVPEPIGGEEIVIVGQVEGQVAAINQQLNANTIVNVVSEEKIQELPDANAAEALGRLPGVAVQRSGGEANKIVLRGLSDRFTTITVDGVRLAATDADARGLDLSTISQSSLAGIELYKALTPDKDADAIAGSVNLVTRKAPEQRLVRIDARGAYNQLNQTWGQYDLSARYGERFWRKRLGVQLIGSLERRDRSREYYDLSYDMGLAGGTDYEISDIELNFRNEIRTRQGVSLLLDLDTPDGGTIRFNNVFNATQRSFIDYYRNYPTEGSEMFYGARDREQNIYTFTSALRGEQYLRGWQLNWGASYARSQSHYPFDFDISFTEPSATDPQGNPIAGMGRIPPEELKGPPENIISYALNNFERAYFYTAFYREEENREDETTLYLDLARDYALGGGVAGQFKVGGKFRRKTRFRERGELLAPYYNEAFPRYVQTADGRVVPKDFSGTPFEHLQMVGDRLLVTNFLGANPEDRDLFDRFRLYPLIDRDLLRTWWELNRNGFSDQAGTNPEFERNLEADAYFYDLTERVSAAYVMNTLHFGPRVSLIAGVRVERENNDYLTRYTPDDLSGFPVPKGTYRDTSSTFSEAIWLPNVHLTLRPTDFLTVRLAAYKALARPDYNQRLPSFVARKAGTFYPGNSLFVGNPDLKAAQAWNYEVNVALYDGRFGLFSVSAFYKDIKNMYHQINGAFFDAASADSLFDRLGINVTSPFQNEGFALTYPYNSSKPTRVWGVEIEHQANFLFLPGVLRNLVLTYNLSFIRSETYIPGTQTEEYCEEILPGICVPKLRYRFVERKHKLERQPDFLSNVAIGYDYRGFSARLSMFHQGEFNTRFSPNGRDDRVVKSFTRWDLALRQQIRPNLYVLLSVNNLTNVEEGTLVLNRVQGWRLPNDREIYGTTVDFGLRLVL
>NZ_AP019796.1|WP_012844960.1|3065579_3065939_+|hypothetical-protein
MKLRLTERDVRLRLEAEDLETLRRTGRVELVTPFDAQTAFTCTLRIDAQTAVPVAHLDGAHLTVRLPIEEARRWLDSDQIGIEARQAAGPNRTLKLLIEKDIGCQHKPQARPSDVAAER
>NZ_AP019796.1|WP_161552719.1|3065919_3066552_+|NTP-transferase-domain-containing-protein
MSPPNADLTALLLAGGRSRRFGTDKARAAVAGVPMLRRVYEAACALTPHVLLSVRADGDFYFDLVPPEVPRLLDPVPDAGPLAGLVAGLRTAQTPWLLALACDLPFLNEATLRGLLAARSPDFDAVVPVTPDGRRQPLCALYRVDVVRPVAEAWLAAGRHALQALLDRLSVTTLSVPDAPLRNVNTPGDLLAERVGPERHISGGRPPARD

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Crispr_ID: NZ_AP019796_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP019796_14

3377903-3378049

Unclear

Consensus_repeat	Method
ATGTTTCACGTGAAACGCTGC	PILER-CR

3 spacers

cas3,WYL

The CRISPR arrays of NZ_AP019796_14

>merge|NZ_AP019796|14|3377903-3378049|PILER-CR
ATGTTTCACGTGAAACACTGCAACACGGCCGCGCCTCCGCTCCGACCGGATGTTTCACGTGAAACGCTGCGGAGAAGCCGAGCGCCCGACATGTTTCACGTGAAACAGTAGCGTCGCCTGCGCCGAGCGTTTCACGTGAAACGCTGC

>NZ_AP019796|14|13|3377903-3378049|PILER-CR
ATGTTTCACGTGAAACACTGC	AACACGGCCGCGCCTCCGCTCCGACCGG
ATGTTTCACGTGAAACGCTGC	GGAGAAGCCGAGCGCCCGAC
ATGTTTCACGTGAAACAGTAG	CGTCGCCTGCGCCGAGCGTT
TCACGTGAAACGCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019796.1\|WP_155816007.1\|3394562_3394967_-\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|234989
NZ_AP019796.1\|WP_161552781.1\|3369932_3370766_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|132997
NZ_AP019796.1\|WP_161552780.1\|3369045_3369951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552790.1\|3383209_3385111_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_AP019796.1\|WP_161542295.1\|3370914_3371337_+\|MaoC-family-dehydratase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|239533
NZ_AP019796.1\|WP_161552786.1\|3376969_3377902_+\|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl\|CDD\|235467
NZ_AP019796.1\|WP_014068205.1\|3391256_3392645_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_AP019796.1\|WP_161552789.1\|3382489_3383209_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_AP019796.1\|WP_161552844.1\|3378128_3381467_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_AP019796.1\|WP_161552779.1\|3367483_3369049_+\|HTTM-domain-containing-protein	unknown	unknown	gnl\|CDD\|214802
NZ_AP019796.1\|WP_161552777.1\|3365898_3367002_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340829
NZ_AP019796.1\|WP_161552782.1\|3371344_3372826_-\|M48-family-metalloprotease	unknown	unknown	gnl\|CDD\|320692
NZ_AP019796.1\|WP_161552795.1\|3388922_3391280_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|236848
NZ_AP019796.1\|WP_161552787.1\|3381439_3382450_-\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_AP019796.1\|WP_161552797.1\|3392663_3394487_-\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|234942
NZ_AP019796.1\|WP_161552783.1\|3372857_3374021_-\|DNA-replication-and-repair-protein-RecF	unknown	unknown	gnl\|CDD\|234608
NZ_AP019796.1\|WP_161552785.1\|3374310_3376992_+\|CHAT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378942
NZ_AP019796.1\|WP_161552793.1\|3386347_3388921_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274362
NZ_AP019796.1\|WP_161552778.1\|3366998_3367487_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP019796.1\|WP_161552792.1\|3385250_3386216_-\|transposase	unknown	unknown	gnl\|CDD\|379252

Protein	Function_ID	Function_description	E-value
NZ_AP019796.1\|WP_155816007.1\|3394562_3394967_-\|ribonuclease-P-protein-component	gnl\|CDD\|234989	PRK01903, rnpA, ribonuclease P protein component.	3.12214e-11
NZ_AP019796.1\|WP_161552781.1\|3369932_3370766_-\|glycosyltransferase	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	1.66199e-15
NZ_AP019796.1\|WP_161552787.1\|3381439_3382450_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.69342e-59
NZ_AP019796.1\|WP_161552790.1\|3383209_3385111_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_AP019796.1\|WP_161542295.1\|3370914_3371337_+\|MaoC-family-dehydratase-N-terminal-domain-containing-protein	gnl\|CDD\|239533	cd03449, R_hydratase, (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.	2.01056e-52
NZ_AP019796.1\|WP_161552786.1\|3376969_3377902_+\|N-acetylmuramic-acid-6-phosphate-etherase	gnl\|CDD\|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	0
NZ_AP019796.1\|WP_014068205.1\|3391256_3392645_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_AP019796.1\|WP_161552789.1\|3382489_3383209_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	5.87203e-47
NZ_AP019796.1\|WP_161552844.1\|3378128_3381467_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_AP019796.1\|WP_161552779.1\|3367483_3369049_+\|HTTM-domain-containing-protein	gnl\|CDD\|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	6.966e-10
NZ_AP019796.1\|WP_161552777.1\|3365898_3367002_+\|glycosyltransferase	gnl\|CDD\|340829	cd03799, GT4_AmsK-like, Erwinia amylovora AmsK and similar proteins. This is a family of GT4 glycosyltransferases found specifically in certain bacteria. AmsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.	4.29982e-64
NZ_AP019796.1\|WP_161552782.1\|3371344_3372826_-\|M48-family-metalloprotease	gnl\|CDD\|320692	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein. This family contains peptidase M48C Ste24p protease bepA (formerly yfgC)-like proteins considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. Several members of this family also contain tetratricopeptide (TPR) repeat motifs, which are involved in a variety of functions including protein-protein interactions. BepA has been shown to possess protease activity and is responsible for the degradation of incorrectly folded LptD, an essential outer-membrane protein (OMP) involved in OM transport and assembly of lipopolysaccharide. Overexpression of the bepA protease causes abnormal biofilm architecture.	4.82127e-65
NZ_AP019796.1\|WP_161552795.1\|3388922_3391280_+\|PAS-domain-S-box-protein	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	3.51297e-65
NZ_AP019796.1\|WP_161552797.1\|3392663_3394487_-\|membrane-protein-insertase-YidC	gnl\|CDD\|234942	PRK01318, PRK01318, membrane protein insertase; Provisional.	7.62796e-123
NZ_AP019796.1\|WP_161552783.1\|3372857_3374021_-\|DNA-replication-and-repair-protein-RecF	gnl\|CDD\|234608	PRK00064, recF, recombination protein F; Reviewed.	1.23907e-97
NZ_AP019796.1\|WP_161552785.1\|3374310_3376992_+\|CHAT-domain-containing-protein	gnl\|CDD\|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	4.98291e-48
NZ_AP019796.1\|WP_161552793.1\|3386347_3388921_+\|PAS-domain-S-box-protein	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	9.59115e-70
NZ_AP019796.1\|WP_161552792.1\|3385250_3386216_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.75656e-10

>NZ_AP019796.1|WP_161552786.1|3376969_3377902_+|N-acetylmuramic-acid-6-phosphate-etherase
MERPSLFEELKALATEQRNPHSMHIDTAPVREILEIINTEDHLVPIAVRREIPYIEQAVHLIVDAFKQGGRLFYVGAGTSGRLGILDAAECPPTFGTPPEMVQGLIAGGPEAVFRAQEGAEDREEDGARDLQRAGVTPRDVVCGLAASRRTPYVVGAIRYARQLGCRTIFITCTPREEFPLEVDVAICPVVGPEVIMGSTRMKSGTAQKLVLNMLSTAAMIRLGKVYENMMVDLQMTNQKLRERAKRTVMIVTGMDYEAASRLLEAAGGHVKTAIVMALAGVSAEEARRRLARADGFVRAAIANEGPPPA
>NZ_AP019796.1|WP_161552785.1|3374310_3376992_+|CHAT-domain-containing-protein
MWPLVLFLWLSLHHGLFAMDVCDSLQQVVAQLPRDAREAPARLRPRAVQALRRYRQCPGLTREQLMQLYRQEASYLHALHRYADVLTLVDTFLTRFARQPDSLMFYQMYRWRGYEYYLFGDLPAAIVAYNQALRYLPAREIRARVNRLSDLGAIYSRIQDYETAYQYYLQAYYLWDQIPPDDSLRLWARLDVLHGLASLLVAHPTLEGRSREAGLAEAGRLLAEARQLLPRANIARRLRLQMQLELGLTEATQRYMSGRPEQALSILDELSLLARQLDEPHWHVEILYRRGMAFWYAERLQEAERSFLEAQAHAEEALHNNTRRLILTRLAQLYEEQDRIDEAGVFFQKAIPYVETYLTHLQTTRWATLPTANWYEPYRGLVRVLLRQQHYAEAFQWLERSRARNLQAFRRYHAWTRQMPLAQQQRRDSLVHALNQIRTRLSNPNLPADEALRLKSQEATLELQLRNLLALPPEPPEASLATLQQLLARVGATALVYFIDSVSGLFLLTADTLRFFPLALTPDSLGQLLRRVSPVFDPEGSGPVRGARHFNLRALHRLFELLVAPALPLLPPDSPLFIVPDGPLFRLPFAALVLDFQRPYAYDRATYLTERHPISILPALGLLLDSLQATDALLDVSGLGRARFADDPRLREVLPVVFRRHPLPDLPGVHEELERITRRFARTQRWEDYRATEPRFRQAATESRVLHLASHVLPHPTSSAFHAIVLSPSPGDDGVLFLHELLRNPLSADLVVLSGCNTAAGEVLPGEGLEGLQYAILAAGARGVVATRWLVEDRSMAELMDRFYGYLAAGLPLDRALQQARLDFLKNAPLELQSPFYWAAPAFFGAPRVLPLTPKSYPLLPWGWILLLLLGVGLGVLLRYRKHRRAHGASLAV
>NZ_AP019796.1|WP_161552783.1|3372857_3374021_-|DNA-replication-and-repair-protein-RecF
MLLRSLRVRNFRAHEDTRVTFASRINLIGGPNGAGKTNLLEAIHYLCLSKSFLAAQDTYALREGAPFFELEGIFAGTHRPELVVRLVYVPGEGKRVFFNGAPLERLADLVGELPVVVLSPADQALTGGPPEERRRFLDNLLSQAYPAYLQDLLQYRRALRQRNELLARWRRHPASVQPSLLESWQEELVTLGSRLIHRRLRFVQEFAAYLAEAHACLGLTAEVPRIEYVTVAPIDPEAEPETIAAAFRARLHRLATREREQGRTLAGPHRDELILRLNGLEVRRYASQGQHRIMGLTLKLAKFFYLRARRDETPLLLLDDVFDGLDRYRTQRILELLQYGEQIEQSFVTSARLDLLQELQTLAAPENRLFWVEAGRVREPDPSLSLS
>NZ_AP019796.1|WP_161552782.1|3371344_3372826_-|M48-family-metalloprotease
MRVRTYLLVFSILIVFAEGCAVSTNPVSGRRRLYGYSWAEERRIGQEADRQIVAQYGLYDDPELAAYVDSLGQVILAHSHLRRPNTPKEFRETPFVFRVLDSPVVNAFALPGGYIYVTRGLLAHLNNEAQLAVVLGHEIGHVAARHASQRAFELQLGQVALLGGAVFGQEVLGLPGGDVLQLGGAVAQLLFLKYSRDDERESDRLGVEYAVRAGYDAAEAAAFFRSLKRLSEQSGASLPSFLSTHPDPGEREQTIRELAARWMQEVGLATRENQVVYYARIEGIVLGEDPRQGYVADGAFYHPTLRFWFPVPADFQVINQPSQVLLVEAEQQAVLVLTLASESSAEEAARAWAAQEGLTVLDRGSERVNGLSAVYVVAEGQTSEGQTVRVLRYFIEHEGRVYSLAGYTLAAQYTRYRPVFLQVMRGFAPLRDPARLNVQPVVLAIRPAERTAPFRALLPALPEAFTPEAVVIMNQAELDAVVQAGTPLKLPQR
>NZ_AP019796.1|WP_161542295.1|3370914_3371337_+|MaoC-family-dehydratase-N-terminal-domain-containing-protein
MYTYETLQVGDRFTATRRITAEDVRKFAELTGDDNPIHLDPEYAKRTRFGRPIVHGVLLLGIISKVLGRDFPGHGSIAVALSCRFLRPVPVDSEITVEVKIAEKIEKHRHIRAKVYIYLDGKIAVGGEATLIPPSPETAP
>NZ_AP019796.1|WP_161552781.1|3369932_3370766_-|glycosyltransferase
MAQELQEKQRWPKVSCLMVTADRPHLVRRAIRSYLQQTYPNRELVVLDNGRQPLDEALLAEVPADELVYARVEPRPDLVIGTLRNQALELARGDYIAPQWDDDDWSHPERLMRQMQVLLSGDYDACTLAGTLMHVNHPAYFFHPFIGLLRHGVPPTIVHRRNATIRYPDLRRTSDTHYVEAWRRTGRYVVLPPSESYLYLRYFHGGNLWEQEHFLRRMRNTPRDFLAYLWYRYVRGNEFDHPRFRLTPAMQAAFEHYLQDSIETGVFDLERLQALHH
>NZ_AP019796.1|WP_161552780.1|3369045_3369951_+|hypothetical-protein
MRSPLRDLFDFERPETPGERLFFWLFELFVVLALSGHAWSWAVYLGRMEAPLYPTGLARYLDVSLLMAPDVALGVAAVVTVLLLLGLTHRWPLAYLLALLGLHLLYVSRFSLGKTPHGTHLLGLTLLSLALGSLLFRTPLHRRRAAMGFAFFFVGLSYTLAALSKLVATGPGWADGMHLTLWILEKGTDMMARTGAWEPNPVQQLLLAYPELGTLLLVGALLLELLAFTVWWRPFRLPVLLALVGMHAGIYAAMQISFHFAAIELLLLALPWSRWLDRLLQVQWAARIGRPLLRLAQWCNA
>NZ_AP019796.1|WP_161552779.1|3367483_3369049_+|HTTM-domain-containing-protein
MNADRLDRWLFDSFRPTARGLAAYRIAYALFVLLLIDPGHSPYFNFHPLAELPDSFFLPPPGPMQLFSGFPPRWFFAGLHLLLDLSLVALLFGYRTRLASWMTGLLFLIGFGFLFSAGKINHVILFVLLPWVMSFSNWGAAWSLDARLGRARPTVEGWPLALLALLTGFAMFTAGFTKLLGGWLDPATQATRGHWLKQYFVVGRQDLLADLVTAPLPAGLWELMDWGTVLLEIGLLPAVFVPGLFRVLLSLMVLFHLGTALLFNITFVQNLIVYAAFLNWDRVAARFPRIRLSPRPALLLIPLLGLAFYFFGSPLRRLDVLVTFSSDLSLTELLANIAAALVVLGIALTRARDLLRRPLPLTSAAAGAYRRARRALAMVLVLYATLVATHAGEFWPMSVFPMFSRAGHPWTRAIVRELEATEPVRWDTLQAPAALPGRPFPLNQTALDPVDLINFVTRPEPWDARRRQTLQRLFGPELEGRRLLVLQVQGMPSGEGVQLRYLPILVLTTDSVQVHPALQQP
>NZ_AP019796.1|WP_161552778.1|3366998_3367487_+|hypothetical-protein
MNCIRIRRLFQVLAVLLPLQYALVGLVQLGGGREPWPLLVMPGFKATWHEGMPLLSQRVTFAIQQSDGTIRPLPADTVLAVLPYSHHRAMLEHFFRPASLSGTPETERIRQPEARRWLWNRLQALTGSAPVRVDIVWEALRIDPKTDALQAQPLDTLTLQRP
>NZ_AP019796.1|WP_161552777.1|3365898_3367002_+|glycosyltransferase
MRPVVLHFKSVYLNLSETFIDRLVRHHERYRPVVGTLHPRHYLDGLPVYAPSGLAAWRDRLLQQLNRTPRFLFEVCRREQPAVLHAHFGLDGYRLLGLAFRTRLPLVVSFYGHDVSRLPDEPGWRRRYRHLARGGTRFIAATEFMKRQLVALGFPEEKIEVVRFGLDLRAFPFQPRTQADLRLLMIGRLVEKKGHRTALEAVARLRAAGYAVELHCYGDGPLRAALQAEARQLGIAACVAFHGAVTNEVARQTYYTHDVLLVPSQTATDGDQEGLPNVIIEGLAAGIPVVATRHAGIPELVVPEKTGLLIPERDAEALASAVARLLETPALVERLSRAGRAAVEQRHSLTRMVRDTEAVYDTVRCSR
>NZ_AP019796.1|WP_161552844.1|3378128_3381467_+|transcription-repair-coupling-factor
MKLTDLQHRLELAAFFEPLHAHLESLSASTRLHLRGLAGSLPAFVLYDLSRHFRRPVLCLTPDEEQAAYLFSDLEQLLGVSDRLLRFPATGQKPYDPEQIPDSAPLIERTDVLRRLAEGFDGLLVASAEAIAERVPPPDRVRQETLVLTPGMVIDPAQLLAHLIARGFERVEFVEAPGEVALRGGILDVYPFTGTHPIRVEFFGDEIDTIREFDPRTQRSISRLTSARIVPNLSAADSEETARSIFEHLPDGALLVLFEEGALFDAVQARFAEAEQAYARLSTPDEHPRPEARYLTPAELATHLHCYPALLFGTLAEAELTLSWDTHPQPAFHGNLHLLRERLHENARRGWETVILCDSRSQEARLHDLLQEEIEAGGVRLLVESLHEGFEVPEARLAVYTDHQIFGRYHRPTTRRRRRLLGGLSLRALQNLQPGDYVVHVDFGIGQFAGLQRITIRGKQQEVVRLHYADGDVLYVSVNALHKLHRYTGKEGHRPRLTKLGSGQWEKVKARTKKRVKDIARDLIRLYAKRKASRGFAFSPDTVWQREMEAAFEYEDTPDQAAAAEAVKRDMEQPVPMDRLVCGDVGFGKTEIAIRAAFKAVQDGKQVAVLVPTTILADQHYETFTRRLAPYPVRIEVLSRFRSPAQQRAVLRDLAAGKVDIIIGTHRLLSKDVQFKDLGLLIIDEEQRFGVAAKERLRQLRVEVDTLTLTATPIPRTLQFALMGARDLSIISTPPPNRQPIVTEIHTFDETLIRDAIRYEISRGGQVFFIHNRVQSIYEMAARLQAIVPDVRIAVAHGQMKPRELERVMHDFMARKYDVLVSTNIIESGLDIPNANTIIINHAEQFGLADLHQLRGRVGRSDRKAFCYLLVPSIHGLTREARQRLQAIEEFSELGSGFSIAMRDLDIRGAGNLLGAEQSGFIEEIGFETYQQILDEAIRELREEEFADVLGAPPPKPPETSVDVEADAFIPDTYVSSNVERLNLYRRLSEATDEAAIEAFREELADRFGPVPPEVDNLLWAARLKLLGQALRLPKVLFKNRRLFLEFPLQDEDPHFYAHHFMPLLERLSQLDRRYVLKDQNRKLRAIVQDVPDLETAYQVLRQLQPAEVPVS
>NZ_AP019796.1|WP_161552787.1|3381439_3382450_-|WYL-domain-containing-protein
MKLAERTRNRTERLFALILLLQTRPGLTARQLAEHFGVSRRTIFRDLRALSEANVPLTYAEGGGYEILEGYQLPPLMFTAREAATLLIGTAFMKRQPDASLRADADAVALKIRSVLPRSIREYIDRLQERIVIDPYWLQTMQGSDEEAGYWYELSEAIARQQSVHLEYYVPSRDEVTQRKVDPLGLVYYTDHWNLIAYDHLRKDIRNFRLDRIQRLTVLRERFTPPRDFDLNAYLEAQGAPAEAHRIRLRFARPTYRWARRSIPARIESEQETAEGVEVTFSFENLEYLARWLLRYGTEVDVLEPEALRAQLRAQARAILARYEPEAAQETGTSAG
>NZ_AP019796.1|WP_161552789.1|3382489_3383209_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MFHVKHPARLPMRVSRETPLAGWDPWAQLDPAQREQLERYARLLQELGRRHNLVSRETLPELHRRHLLHCLALTWQPFPPESVVVDWGTGGGLPAVPLAIAFPEVTVHAVDAAQKKVLAVRTMVRRLGLTNLHVHHARAEHWEGAAHYSVSRATAPLATLWQWHRRVARPLAAPPDVWPPGLLALKGGDLSDELAALERLDPHLHVRLWPLDRLLGDPLFAEKYLVHVAPEPEADASVR
>NZ_AP019796.1|WP_161552790.1|3383209_3385111_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MEIFSDERYDVIVVGGGHAGAEAAAAAARMGARTLLITMSLETIGRMSCNPAIGGIGKGHLVREIDALGGIMGRMADQTGIQFRMLNRSKGPAVWGPRAQCDRKRYAEAVRHELESIPNLWMRADTVTEVLVEDRRVKGVRTQLGKTFYAPCVILTNGTFLNGVIHVGERQLGGGRMGERAATGLTACLERLGFESGRLKTGTPPRIDGRTIDYSRLQEQPGDPEPLPFSYMTDRLPDRQLSCWLTYTTPEVHAILRTGFDRSPMFTGRIKGRGPRYCPSIEDKIERFAERERHPIFLEPEGWDTYEVYVNGFSTSLPEEVQVAALRKIPGLERVHVLRPGYAIEYDYFPPYQIRYSLETKYVEGLFFAGQINGTTGYEEAAAQGLMAGINAVQKLRGAEPVVLRRSEAYIGVLIDDLVAKGTDEPYRMFTSRAEHRILLRQDNADLRLTELGYRLGLATRERYERMLKKKEAIARTRRALEETTVRPEQVNGYLERVGTSPIDRPERLVRLALRPQVNLRDLLEATGLREQVVVPAPGMEPVEMLVEIELKYEGYMDRERELVEKMRELEDWRIPPDFDYEAVETISKEAREKLSKIRPENLGQASRISGVRPADISVLMVLLRRYRRPQAA
>NZ_AP019796.1|WP_161552792.1|3385250_3386216_-|transposase
MCWITFISWLRPNGSSPPPKRLGFGQGSSTPQRTRAYTRLLKRIPLDTEALWQEVAPFVQPDRGVLVVDDTTLDKPHARKMALVRRHWSGKHKRVVQGINLISLLWTEGQARLPCDFRLYNRAEDGLFRALLQTAHARGFQPRLVAFDSWYASLANLKYVGQLGWEWFTRLKANRLVSVEGDCRNRPVSSWSIPAEGCVMHLKGYGWVKVFKTVTPDGREEYRASSRLDMTLEESAAYGRHAWQIEVYHQGLKQFTGIERGPFRVAEAQRNHIGLAIGAFLRLEVARLQRGISWFEAKQAILREAIRHYLASPSLILHSTA
>NZ_AP019796.1|WP_161552793.1|3386347_3388921_+|PAS-domain-S-box-protein
MEAVSITCWTPTAEAPLPAVLAERLPPEARRWIETLRENPPQAPLAHPFDTATGPLLLLALPYPSDPPLLVVALDLRTIFPETDTFFRTLVQSLRAVLWEADARTFRFTYVSPQAEELLGYPVSRWLEEPDFWTAHIHPEDRDQAVAYCRETTDRSEDHDFTYRMIRADGQVIWVRDIVTVVPDEQGRPHRLRGLLLDITEEQETRRELEVFRQRYQDLISNNPIATGVYCRGQVVYANPALARLYGAKRPEDLLGKTAADLIHPSNLEAALENVRKVVERREPVSYGRGRIQRLDGRSAIVDFRGVPITWEGAPAVLFFMWDVSEQLHTARRLAEREAQYQALFENAPAPMYVRRDRQFLLVNPAFVRLTGYSAEELTAPGFDAMRLVAPQSLPVVQERLARRRQGLPVAPRYELWIRRKDEKEILVEGTSINIRWEGQPAVQGFFQDLSARRETETYLREARRQAEEASQLKSRFLELMTHEIRTPLSTILGYAELLQDELAGKIPSELLEFIEVIRDSGRRLLGMLSDVLDLSLLETQRRRLEAEAVDLNDLARRLEADFAPMARAKGLRWETEVPEQPVRVVADEEALHRALANIVHNAVKFTENGTVRLRVGQSDRDGWIQVSDTGPGMDPAFARTGLFEPFRQESEGTARRHEGAGLGMTVARRFVEAMRGCIEVDTAPGQGTTVTVHLPLLEAQPAPTSSALHPEARELRRLQQRLQTHHPRILIVEDNPENARFLELALQDMAEVTVAADATRALEAIDAHLLENRRFDLILLDLNLPGDFNGQALLHEIRRRSAYHHVPIVAQTAYAEPFRPEDFLAEGFDGFLIKPIDRLTLYRELDRLLTRQPTPS
>NZ_AP019796.1|WP_161552795.1|3388922_3391280_+|PAS-domain-S-box-protein
MSAPAELLPDFYRILFEEANDGIFLADVETGRLLDANPRACELIGRTRDAIRGMHHLELHPREERERYRAIFEHRAEAGRGIDRAEVVHRDGTRIPVEISAARTMLGDRPVLIGIFRDLRPHHELEQKLHEAESHYRILAEQNLIGVYLIQDGRFVYVNQYVADFLGYERPEDLIGRSLIELVHPEDLPTVTANIQKRLSGEMRTVHYSLRGFHRRGHVVDVEVIGSATTYRGRPAVLGVMLHTSEARRQARFYETESRILQDLLRGAPQAALLDALCTAIEARLPDGICTILLLSKDRLYRGASHMPPEYGARIEKLEIGPEVGSCGTAAFTKQPVWASDVFSDPRWAAYRELAERFNFRACWSYPIRNARGEVLGTFAVYFPAERTPEPHEKEVLARGASLAALILETHRIQSENARLAEVARQTSSGVLITDSERRVLWLNEGFTRLTGYTLADVYGRRPPEFLAGERTDRNTLEGIGERLREGLPVHTRIYFYRKDGTGFWDELRIEPLRDEQGRLIGFMGLNHDITALVAREQELERARAEAETAARLKAAFLANMSHEIRTPLNSILGFAELLDEQLATIGQEALREFTGIIQRSGRRLLRLINDILELSRLEADRLVLRTEPCALHTIVEEAVAELHPQAAQKGLALVVRAEAVPPVSGDPRRLHQIVTNLVGNALKYTEQGEVRVELQKTTEDGVRQVVLRVTDTGPGIDPDFLPHLFEPFQRAPSENDRSEGSGLGLAITKRLVEQMNGRITVESAPGKGTTFTVTFPALLTDAEA
>NZ_AP019796.1|WP_014068205.1|3391256_3392645_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MRQRGDTIAAIATARGRAALAIVRLSGPEACRIAAACFRGADLQAVPSHTAHFGYVLSPDGEPIDQVVATVFRAPRSYTGEDVVELTCHGGDLAPQLILETLLHHGARLAEPGEFTLRAFLNGKLDLAQAEAVADLIHAGSTRAHRVSLAHLQGRYSEQLQRLRSDLLELCAYVELELDFSDEDVEFADRAQLEALLDRTERLLDELLRSYRLGELLRDGVRVVIGGRPNAGKSTLLNALLGQDRAIVSPVPGTTRDQIEAEAEIEGLRFRFVDTAGLRATADEIEAEGVRRAQQAIATADVLVYVFDLTVGLAPDEQAYLTRLRTEQPALPVIVVGNKRDLLDTAPELPALDRPVLALSARRAREDAAELQPLVRELVAAVTADLGSMDDSAVVMNQRHRQHLARAREAVQAARAALDQGLSGDLLALELRRALHELGAITGEITTEDVLDQIFSRFCIGK
>NZ_AP019796.1|WP_161552797.1|3392663_3394487_-|membrane-protein-insertase-YidC
MDRNVVIATILTALIMFVWLWWLAPPPPPLTTAARDSLQQEDTAAQETPVPEETPASPGAPLLAGPLSDTLLAAARNGRARTITIETDLYEAQLSTKGATLVSLKLKKYKQYDFETPVQLVDTTKPGALSLVFTTPTNHLVDTRTLYFQTATTPDTIRVADEPVEVAFEVPVGDGRIRQVYTFLPDDYEVRLRVEQEGAATFSTIEGYELVWNGGVPFAERDRDDEARHSGAFARSGGELEKITLDRHRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELVGERLGEPEDPSYWEDYAARLLMPRPEDGQVDEFRLYLGPMEYFRLARYDLGLYDMVDYGWDAFEWMTRPLAKFVFIPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREKYADNPQKQQEAMMKLYREKKINPLGGCLPMLLQWPVLIALWQYFQQSLIVRQQAFLWAKDLSAPDPILHLPFKIPLYGDFVAGFTLLMGLSMIIQMRIQSASTPSNPQTKILTYVFPVFIFAIFNRLSSALNLYYLCYNIFSAIQQFWINRSLEKEKAKAAVDGQGDRRAAQKAARKAAEARRKKKARTRR
>NZ_AP019796.1|WP_155816007.1|3394562_3394967_-|ribonuclease-P-protein-component
MPRAFRLRRQRLIRPLFDRSRTDVGTIARGCVRLLYRVVPRSEVGADVPVQVGFSAGRQARRAVVRNRIRRLLRETYRLHQHPLVELFRNRPDTLTLMILYRADPAVARECIRRDLPEALRRLTEQLKNTLLEA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP019796_6	6.1\|1683389\|35\|NZ_AP019796\|CRISPRCasFinder,CRT	1683389-1683423	35	NZ_AP019796.1	1682485-1682519	0	1.0

1. spacer 6.1|1683389|35|NZ_AP019796|CRISPRCasFinder,CRT matches to position: 1682485-1682519, mismatch: 0, identity: 1.0

acatgtacctgcgcggaatatcggttacggagatc	CRISPR spacer
acatgtacctgcgcggaatatcggttacggagatc	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019796_5	5.4\|1681077\|38\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681077-1681114	38	AX059140	Sequence 1 from Patent WO0075335	11370-11407	0	1.0
NZ_AP019796_5	5.4\|1681077\|38\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681077-1681114	38	NC_004735	Rhodothermus phage RM378, complete genome	11370-11407	0	1.0
NZ_AP019796_13	13.1\|3047849\|35\|NZ_AP019796\|CRISPRCasFinder	3047849-3047883	35	AX059140	Sequence 1 from Patent WO0075335	119418-119452	1	0.971
NZ_AP019796_13	13.1\|3047849\|35\|NZ_AP019796\|CRISPRCasFinder	3047849-3047883	35	NC_004735	Rhodothermus phage RM378, complete genome	119418-119452	1	0.971
NZ_AP019796_14	14.3\|3378014\|20\|NZ_AP019796\|PILER-CR	3378014-3378033	20	MH834627	Arthrobacter phage Ryan, complete genome	6606-6625	1	0.95
NZ_AP019796_3	3.11\|568429\|33\|NZ_AP019796\|PILER-CR,CRT	568429-568461	33	AX059140	Sequence 1 from Patent WO0075335	84498-84530	2	0.939
NZ_AP019796_3	3.11\|568429\|33\|NZ_AP019796\|PILER-CR,CRT	568429-568461	33	NC_004735	Rhodothermus phage RM378, complete genome	84498-84530	2	0.939
NZ_AP019796_3	3.25\|568430\|32\|NZ_AP019796\|CRISPRCasFinder	568430-568461	32	AX059140	Sequence 1 from Patent WO0075335	84498-84529	2	0.938
NZ_AP019796_3	3.25\|568430\|32\|NZ_AP019796\|CRISPRCasFinder	568430-568461	32	NC_004735	Rhodothermus phage RM378, complete genome	84498-84529	2	0.938
NZ_AP019796_11	11.5\|2075023\|34\|NZ_AP019796\|CRISPRCasFinder,CRT	2075023-2075056	34	AX059140	Sequence 1 from Patent WO0075335	38440-38473	4	0.882
NZ_AP019796_11	11.5\|2075023\|34\|NZ_AP019796\|CRISPRCasFinder,CRT	2075023-2075056	34	NC_004735	Rhodothermus phage RM378, complete genome	38440-38473	4	0.882
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	148680-148711	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP050084	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence	207246-207277	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	129916-129947	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	167165-167196	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	167164-167195	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	27728-27759	6	0.812
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP053209	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence	19185-19216	6	0.812
NZ_AP019796_11	11.35\|2077010\|37\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2077010-2077046	37	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	72644-72680	6	0.838
NZ_AP019796_11	11.81\|2080084\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2080084-2080119	36	NC_013502	Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequence	119754-119789	6	0.833
NZ_AP019796_14	14.1\|3377924\|28\|NZ_AP019796\|PILER-CR	3377924-3377951	28	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	524375-524402	6	0.786
NZ_AP019796_14	14.1\|3377924\|28\|NZ_AP019796\|PILER-CR	3377924-3377951	28	NC_013386	Ammonifex degensii KC4 plasmid pADEG01, complete sequence	393-420	6	0.786
NZ_AP019796_3	3.14\|568612\|33\|NZ_AP019796\|PILER-CR,CRT	568612-568644	33	MN694501	Marine virus AFVG_250M1038, complete genome	29071-29103	7	0.788
NZ_AP019796_3	3.14\|568612\|33\|NZ_AP019796\|PILER-CR,CRT	568612-568644	33	MN694135	Marine virus AFVG_250M1039, complete genome	29064-29096	7	0.788
NZ_AP019796_3	3.14\|568612\|33\|NZ_AP019796\|PILER-CR,CRT	568612-568644	33	MN694756	Marine virus AFVG_250M15, complete genome	12945-12977	7	0.788
NZ_AP019796_3	3.14\|568612\|33\|NZ_AP019796\|PILER-CR,CRT	568612-568644	33	MN694550	Marine virus AFVG_250M60, complete genome	12613-12645	7	0.788
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NC_019847	Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence	194688-194719	7	0.781
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1019577-1019608	7	0.781
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1215909-1215940	7	0.781
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	959979-960010	7	0.781
NZ_AP019796_3	3.23\|568308\|32\|NZ_AP019796\|CRISPRCasFinder	568308-568339	32	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	11009-11040	7	0.781
NZ_AP019796_3	3.28\|568613\|32\|NZ_AP019796\|CRISPRCasFinder	568613-568644	32	MN694501	Marine virus AFVG_250M1038, complete genome	29071-29102	7	0.781
NZ_AP019796_3	3.28\|568613\|32\|NZ_AP019796\|CRISPRCasFinder	568613-568644	32	MN694756	Marine virus AFVG_250M15, complete genome	12946-12977	7	0.781
NZ_AP019796_3	3.28\|568613\|32\|NZ_AP019796\|CRISPRCasFinder	568613-568644	32	MN694135	Marine virus AFVG_250M1039, complete genome	29064-29095	7	0.781
NZ_AP019796_3	3.28\|568613\|32\|NZ_AP019796\|CRISPRCasFinder	568613-568644	32	MN694550	Marine virus AFVG_250M60, complete genome	12614-12645	7	0.781
NZ_AP019796_11	11.63\|2078883\|35\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2078883-2078917	35	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	568818-568852	7	0.8
NZ_AP019796_11	11.63\|2078883\|35\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2078883-2078917	35	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1648272-1648306	7	0.8
NZ_AP019796_11	11.89\|2080623\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2080623-2080658	36	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	103896-103931	7	0.806
NZ_AP019796_14	14.1\|3377924\|28\|NZ_AP019796\|PILER-CR	3377924-3377951	28	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	334295-334322	7	0.75
NZ_AP019796_14	14.1\|3377924\|28\|NZ_AP019796\|PILER-CR	3377924-3377951	28	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	94775-94802	7	0.75
NZ_AP019796_14	14.1\|3377924\|28\|NZ_AP019796\|PILER-CR	3377924-3377951	28	NZ_CP042916	Rhodococcus qingshengii strain RL1 plasmid unnamed1, complete sequence	67570-67597	7	0.75
NZ_AP019796_3	3.8\|568246\|33\|NZ_AP019796\|PILER-CR,CRT	568246-568278	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1423418-1423450	8	0.758
NZ_AP019796_3	3.8\|568246\|33\|NZ_AP019796\|PILER-CR,CRT	568246-568278	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1226136-1226168	8	0.758
NZ_AP019796_3	3.8\|568246\|33\|NZ_AP019796\|PILER-CR,CRT	568246-568278	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1235616-1235648	8	0.758
NZ_AP019796_3	3.9\|568307\|33\|NZ_AP019796\|PILER-CR,CRT	568307-568339	33	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	11009-11041	8	0.758
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1423418-1423449	8	0.75
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1226136-1226167	8	0.75
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1235616-1235647	8	0.75
NZ_AP019796_3	3.27\|568552\|32\|NZ_AP019796\|CRISPRCasFinder	568552-568583	32	CP032840	Aeromonas veronii strain FC951 plasmid unnamed	116798-116829	8	0.75
NZ_AP019796_5	5.15\|1681818\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681818-1681853	36	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	744156-744191	8	0.778
NZ_AP019796_5	5.16\|1681884\|37\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681884-1681920	37	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	496331-496367	8	0.784
NZ_AP019796_5	5.16\|1681884\|37\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681884-1681920	37	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1572849-1572885	8	0.784
NZ_AP019796_5	5.16\|1681884\|37\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681884-1681920	37	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1551078-1551114	8	0.784
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1855944-1855979	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	735204-735239	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	786742-786777	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1241122-1241157	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1430721-1430756	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	700986-701021	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	858135-858170	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	250460-250495	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	877024-877059	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1052925-1052960	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	613976-614011	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1205882-1205917	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	774965-775000	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1837807-1837842	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	251029-251064	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	862481-862516	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1185749-1185784	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	790211-790246	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	689547-689582	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	788811-788846	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	975900-975935	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	293510-293545	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	786004-786039	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1199265-1199300	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	862470-862505	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	975867-975902	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	975868-975903	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	756618-756653	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	851990-852025	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1175425-1175460	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	791344-791379	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	772038-772073	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	826279-826314	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	863153-863188	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1288441-1288476	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	941484-941519	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	975866-975901	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	896717-896752	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1202224-1202259	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	975892-975927	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019796_5	5.18\|1682018\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1682018-1682053	36	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1202224-1202259	8	0.778
NZ_AP019796_11	11.35\|2077010\|37\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2077010-2077046	37	NC_008243	Chelativorans sp. BNC1 plasmid 2, complete sequence	11743-11779	8	0.784
NZ_AP019796_11	11.83\|2080217\|37\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2080217-2080253	37	NZ_CP014599	Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence	280311-280347	8	0.784
NZ_AP019796_3	3.4\|568002\|33\|NZ_AP019796\|PILER-CR,CRT	568002-568034	33	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	651813-651845	9	0.727
NZ_AP019796_3	3.18\|568003\|32\|NZ_AP019796\|CRISPRCasFinder	568003-568034	32	NZ_CP049244	Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence	651813-651844	9	0.719
NZ_AP019796_3	3.19\|568064\|32\|NZ_AP019796\|CRISPRCasFinder	568064-568095	32	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	268107-268138	9	0.719
NZ_AP019796_3	3.19\|568064\|32\|NZ_AP019796\|CRISPRCasFinder	568064-568095	32	NC_006824	Aromatoleum aromaticum EbN1 plasmid 2, complete sequence	189278-189309	9	0.719
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	49267-49298	9	0.719
NZ_AP019796_3	3.24\|568369\|32\|NZ_AP019796\|CRISPRCasFinder	568369-568400	32	NZ_CP017591	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence	77464-77495	9	0.719
NZ_AP019796_3	3.24\|568369\|32\|NZ_AP019796\|CRISPRCasFinder	568369-568400	32	NZ_CP049116	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence	43494-43525	9	0.719
NZ_AP019796_5	5.5\|1681145\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681145-1681180	36	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	199372-199407	9	0.75
NZ_AP019796_5	5.5\|1681145\|36\|NZ_AP019796\|PILER-CR,CRISPRCasFinder,CRT	1681145-1681180	36	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	383998-384033	9	0.75
NZ_AP019796_11	11.27\|2076479\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2076479-2076514	36	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	294193-294228	9	0.75
NZ_AP019796_11	11.83\|2080217\|37\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2080217-2080253	37	NZ_CP035513	Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence	19473-19509	9	0.757
NZ_AP019796_3	3.4\|568002\|33\|NZ_AP019796\|PILER-CR,CRT	568002-568034	33	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	451143-451175	10	0.697
NZ_AP019796_3	3.5\|568063\|33\|NZ_AP019796\|PILER-CR,CRT	568063-568095	33	NZ_AP022607	Mycobacterium branderi strain JCM 12687 plasmid pJCM12687	268107-268139	10	0.697
NZ_AP019796_3	3.18\|568003\|32\|NZ_AP019796\|CRISPRCasFinder	568003-568034	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	451144-451175	10	0.688
NZ_AP019796_3	3.19\|568064\|32\|NZ_AP019796\|CRISPRCasFinder	568064-568095	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1404696-1404727	10	0.688
NZ_AP019796_3	3.22\|568247\|32\|NZ_AP019796\|CRISPRCasFinder	568247-568278	32	MF417880	Uncultured Caudovirales phage clone 9F_5, partial genome	38719-38750	10	0.688
NZ_AP019796_3	3.23\|568308\|32\|NZ_AP019796\|CRISPRCasFinder	568308-568339	32	MK388689	Pantoea phage vB_PagM_LIET2, complete genome	67656-67687	10	0.688
NZ_AP019796_11	11.58\|2078550\|37\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2078550-2078586	37	NZ_CP015740	Shinella sp. HZN7 plasmid pShin-04, complete sequence	4763-4799	10	0.73
NZ_AP019796_11	11.47\|2077814\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2077814-2077849	36	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1802163-1802198	11	0.694
NZ_AP019796_11	11.67\|2079151\|35\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2079151-2079185	35	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	34202-34236	11	0.686
NZ_AP019796_11	11.52\|2078146\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2078146-2078181	36	NZ_CP010682	Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence	43245-43280	12	0.667
NZ_AP019796_11	11.52\|2078146\|36\|NZ_AP019796\|CRISPRCasFinder,CRT,PILER-CR	2078146-2078181	36	NZ_CP010644	Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence	43295-43330	12	0.667

1. spacer 5.4|1681077|38|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 0, identity: 1.0

tctggatggaaggtgagaaagcctataagcggcttccg	CRISPR spacer
tctggatggaaggtgagaaagcctataagcggcttccg	Protospacer
**************************************

2. spacer 5.4|1681077|38|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 0, identity: 1.0

tctggatggaaggtgagaaagcctataagcggcttccg	CRISPR spacer
tctggatggaaggtgagaaagcctataagcggcttccg	Protospacer
**************************************

3. spacer 13.1|3047849|35|NZ_AP019796|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 1, identity: 0.971

ttatctcagaaacaaatatggatcaccggaaaaaa	CRISPR spacer
ctatctcagaaacaaatatggatcaccggaaaaaa	Protospacer
.**********************************

4. spacer 13.1|3047849|35|NZ_AP019796|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 1, identity: 0.971

ttatctcagaaacaaatatggatcaccggaaaaaa	CRISPR spacer
ctatctcagaaacaaatatggatcaccggaaaaaa	Protospacer
.**********************************

5. spacer 14.3|3378014|20|NZ_AP019796|PILER-CR matches to MH834627 (Arthrobacter phage Ryan, complete genome) position: , mismatch: 1, identity: 0.95

agtagcgtcgcctgcgccga	CRISPR spacer
ggtagcgtcgcctgcgccga	Protospacer
.*******************

6. spacer 3.11|568429|33|NZ_AP019796|PILER-CR,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.939

cctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
*****.************************ **

7. spacer 3.11|568429|33|NZ_AP019796|PILER-CR,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.939

cctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
*****.************************ **

8. spacer 3.25|568430|32|NZ_AP019796|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.938

ctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
ctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
****.************************ **

9. spacer 3.25|568430|32|NZ_AP019796|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.938

ctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
ctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
****.************************ **

10. spacer 11.5|2075023|34|NZ_AP019796|CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 4, identity: 0.882

gcgacggacgggagtggtccccgcctcgtggaga	CRISPR spacer
acggcggatgggagtggtccccgcctcgtggaaa	Protospacer
.**.****.***********************.*

11. spacer 11.5|2075023|34|NZ_AP019796|CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 4, identity: 0.882

gcgacggacgggagtggtccccgcctcgtggaga	CRISPR spacer
acggcggatgggagtggtccccgcctcgtggaaa	Protospacer
.**.****.***********************.*

12. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *

13. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcactaggtcgcggatttcatcgtcgctca	Protospacer
*.****.******** ************ *

14. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *

15. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *

16. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *

17. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *

18. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcactaggtcgcggatttcatcgtcgctca	Protospacer
*.****.******** ************ *

19. spacer 11.35|2077010|37|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 6, identity: 0.838

gcggccgggcggcccggtgatctgct-ccaggcccgtc	CRISPR spacer
gcggccgggcggcacggtgagctgctggcgcgcccgt-	Protospacer
************* ****** *****  *. ******

20. spacer 11.81|2080084|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NC_013502 (Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequence) position: , mismatch: 6, identity: 0.833

gtagtccgctgtcggcggcgagttcgttcataatgt	CRISPR spacer
ggaaatcgccgtcggcggcgagttcgttcagaatgt	Protospacer
* *. .***.******************** *****

21. spacer 14.1|3377924|28|NZ_AP019796|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcgcctccgctccgaccgg	CRISPR spacer
gggaaggcggcgcctccgctccggccgg	Protospacer
.. * *** **************.****

22. spacer 14.1|3377924|28|NZ_AP019796|PILER-CR matches to NC_013386 (Ammonifex degensii KC4 plasmid pADEG01, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcgcctccgctccgaccgg	CRISPR spacer
agaacggccgcgccttcgctccgatgcg	Protospacer
*. ************.********.  *

23. spacer 3.14|568612|33|NZ_AP019796|PILER-CR,CRT matches to MN694501 (Marine virus AFVG_250M1038, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . ***

24. spacer 3.14|568612|33|NZ_AP019796|PILER-CR,CRT matches to MN694135 (Marine virus AFVG_250M1039, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . ***

25. spacer 3.14|568612|33|NZ_AP019796|PILER-CR,CRT matches to MN694756 (Marine virus AFVG_250M15, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccataccaacagagccatgtgatccgtacatta-	Protospacer
*** *************** *** *** . *.*

26. spacer 3.14|568612|33|NZ_AP019796|PILER-CR,CRT matches to MN694550 (Marine virus AFVG_250M60, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . ***

27. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NC_019847 (Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

28. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

29. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

30. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

31. spacer 3.23|568308|32|NZ_AP019796|CRISPRCasFinder matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 7, identity: 0.781

acgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
agcaactcatccggcaccaccggcaccggctg	Protospacer
*  ** ***** *************** * *

32. spacer 3.28|568613|32|NZ_AP019796|CRISPRCasFinder matches to MN694501 (Marine virus AFVG_250M1038, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . ***

33. spacer 3.28|568613|32|NZ_AP019796|CRISPRCasFinder matches to MN694756 (Marine virus AFVG_250M15, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cataccaacagagccatgtgatccgtacatta-	Protospacer
** *************** *** *** . *.*

34. spacer 3.28|568613|32|NZ_AP019796|CRISPRCasFinder matches to MN694135 (Marine virus AFVG_250M1039, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . ***

35. spacer 3.28|568613|32|NZ_AP019796|CRISPRCasFinder matches to MN694550 (Marine virus AFVG_250M60, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . ***

36. spacer 11.63|2078883|35|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.8

gggcgccgtgccgtcgcctgcagccacgaccgtca	CRISPR spacer
gagggttgagccgtcgccttcggccacgaccgtca	Protospacer
*.* *..* ********** *.*************

37. spacer 11.63|2078883|35|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.8

gggcgccgtgccgtcgcctgcagccacgaccgtca	CRISPR spacer
gagggttgagccgtcgccttcggccacgaccgtca	Protospacer
*.* *..* ********** *.*************

38. spacer 11.89|2080623|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 7, identity: 0.806

-gcaggtagagcgcgcgctgctggatctgctcgacga	CRISPR spacer
ggtcagta-cgcgcgcggtgctggacctgctcgacga	Protospacer
 *. .***  ******* *******.***********

39. spacer 14.1|3377924|28|NZ_AP019796|PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.75

aacacggccgcgcctccgctccgaccgg	CRISPR spacer
cgatcggccgcgccttcgcgccgaccgt	Protospacer
 .  ***********.*** *******

40. spacer 14.1|3377924|28|NZ_AP019796|PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.75

aacacggccgcgcctccgctccgaccgg	CRISPR spacer
cgatcggccgcgccttcgcgccgaccgt	Protospacer
 .  ***********.*** *******

41. spacer 14.1|3377924|28|NZ_AP019796|PILER-CR matches to NZ_CP042916 (Rhodococcus qingshengii strain RL1 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

aacacggccgcgcctccgctccgaccgg	CRISPR spacer
tcgacggccgcgccgccgctccgtccac	Protospacer
   *********** ******** **.

42. spacer 3.8|568246|33|NZ_AP019796|PILER-CR,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.*

43. spacer 3.8|568246|33|NZ_AP019796|PILER-CR,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.*

44. spacer 3.8|568246|33|NZ_AP019796|PILER-CR,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.*

45. spacer 3.9|568307|33|NZ_AP019796|PILER-CR,CRT matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 8, identity: 0.758

cacgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
tagcaactcatccggcaccaccggcaccggctg	Protospacer
.*  ** ***** *************** * *

46. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.*

47. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.*

48. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.*

49. spacer 3.27|568552|32|NZ_AP019796|CRISPRCasFinder matches to CP032840 (Aeromonas veronii strain FC951 plasmid unnamed) position: , mismatch: 8, identity: 0.75

tctatcgagtcgggatcgatgatgccccgcca	CRISPR spacer
cccgtctggtcggcattgatgatgccccgccc	Protospacer
.*..** .***** **.**************

50. spacer 5.15|1681818|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.778

acgaaggtcagatgcgcctcgtcggcgctcgagaac	CRISPR spacer
aagagcttcagatgcgcctcgttggcgctccagatg	Protospacer
* **.  ***************.******* ***

51. spacer 5.16|1681884|37|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********

52. spacer 5.16|1681884|37|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********

53. spacer 5.16|1681884|37|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********

54. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

55. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

56. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

57. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

58. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

59. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

60. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

61. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

62. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

63. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

64. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

65. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

66. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

67. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

68. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

69. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

70. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

71. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

72. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

73. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

74. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

75. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

76. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

77. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

78. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

79. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

80. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

81. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

82. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

83. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

84. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

85. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

86. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

87. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

88. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

89. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

90. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

91. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

92. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

93. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

94. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

95. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

96. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

97. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

98. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

99. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

100. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

101. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

102. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

103. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

104. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

105. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

106. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

107. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

108. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

109. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

110. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

111. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

112. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

113. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

114. spacer 5.18|1682018|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

115. spacer 11.35|2077010|37|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.784

gcggccgggcggcccggtgatctgctccaggcccgtc--	CRISPR spacer
tcggccgggcggcagggtgatctgctcc--gtccagcgc	Protospacer
 ************  *************  *.**. *

116. spacer 11.83|2080217|37|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014599 (Yangia sp. CCB-MM3 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.784

cgtctg-caccgccgccgccatctccggcacgatcgcc	CRISPR spacer
-gtccgatctcgccgccgccctctccggctcgatcggc	Protospacer
 ***.* . .********** ******** ****** *

117. spacer 3.4|568002|33|NZ_AP019796|PILER-CR,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.727

cgatctcgcgcccggtaagcttgggcgcgagat	CRISPR spacer
cgatctcgcgcgcggtcagcttggcggtgttga	Protospacer
*********** **** *******  *.*  .

118. spacer 3.18|568003|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gatctcgcgcccggtaagcttgggcgcgagat	CRISPR spacer
gatctcgcgcgcggtcagcttggcggtgttga	Protospacer
********** **** *******  *.*  .

119. spacer 3.19|568064|32|NZ_AP019796|CRISPRCasFinder matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 9, identity: 0.719

ccctcgccggccgccatcgtgattctcgttac	CRISPR spacer
ctgacgccggccaccatggtgattctcggcct	Protospacer
*.  ********.**** ********** . .

120. spacer 3.19|568064|32|NZ_AP019796|CRISPRCasFinder matches to NC_006824 (Aromatoleum aromaticum EbN1 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.719

ccctcgccggccgccatcgtgattctcgttac	CRISPR spacer
cccgcgctggccgccatcgtgatctgcccgtc	Protospacer
*** ***.***************.. * .  *

121. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcatcaggtcgcgcatttcctcgatcccgt	Protospacer
*.***.*************** *** .  .*.

122. spacer 3.24|568369|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP017591 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence) position: , mismatch: 9, identity: 0.719

cttccggaaggttgaacagcagaacgcgcgcc	CRISPR spacer
ggccaggaaggttgaaaagcaaaacgcgatac	Protospacer
  .* *********** ****.******   *

123. spacer 3.24|568369|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP049116 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cttccggaaggttgaacagcagaacgcgcgcc	CRISPR spacer
ggccaggaaggttgaaaagcaaaacgcgatac	Protospacer
  .* *********** ****.******   *

124. spacer 5.5|1681145|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 9, identity: 0.75

tcgcgtcggtgccgatgcgccgagcgccgaggtgcc	CRISPR spacer
ccgccggcctgccgatgcgccgatcaccgaggtgct	Protospacer
.***     ************** *.*********.

125. spacer 5.5|1681145|36|NZ_AP019796|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.75

tcgcgtcggtgccgatgcgccgagcgccgaggtgcc----	CRISPR spacer
cggcggcggcgccgatgcgccgagcgcc----cgccgcag	Protospacer
. *** ***.******************    .***

126. spacer 11.27|2076479|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

cgaccgacgcgcttgtcgagcagcttcagcgccacc	CRISPR spacer
gatcggacgcgcttgtcgagcagctccatcgcgata	Protospacer
 . * ********************.** *** *.

127. spacer 11.83|2080217|37|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035513 (Haematobacter massiliensis strain OT1 plasmid pOT1-3, complete sequence) position: , mismatch: 9, identity: 0.757

cgtctgcaccgccgccgccatctccggcacgatcgcc	CRISPR spacer
gacccgcaccgccgccgccatgtcctgcacgctgacc	Protospacer
 ..*.**************** *** ***** * .**

128. spacer 3.4|568002|33|NZ_AP019796|PILER-CR,CRT matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 10, identity: 0.697

cgatctcgcgcccggtaagcttgggcgcgagat	CRISPR spacer
ccgcatcgcgcgcggtaagcctgggcgcggtgc	Protospacer
* .. ****** ********.********. ..

129. spacer 3.5|568063|33|NZ_AP019796|PILER-CR,CRT matches to NZ_AP022607 (Mycobacterium branderi strain JCM 12687 plasmid pJCM12687) position: , mismatch: 10, identity: 0.697

cccctcgccggccgccatcgtgattctcgttac	CRISPR spacer
gctgacgccggccaccatggtgattctcggcct	Protospacer
 *.  ********.**** ********** . .

130. spacer 3.18|568003|32|NZ_AP019796|CRISPRCasFinder matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 10, identity: 0.688

gatctcgcgcccggtaagcttgggcgcgagat	CRISPR spacer
cgcatcgcgcgcggtaagcctgggcgcggtgc	Protospacer
 .. ****** ********.********. ..

131. spacer 3.19|568064|32|NZ_AP019796|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.688

ccctcgccggccgccatcgtgattctcgttac	CRISPR spacer
gtcctgccggccgccgtcgtgatgctcgccgt	Protospacer
 .*..**********.******* ****....

132. spacer 3.22|568247|32|NZ_AP019796|CRISPRCasFinder matches to MF417880 (Uncultured Caudovirales phage clone 9F_5, partial genome) position: , mismatch: 10, identity: 0.688

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ggcctccagttcgcgcagttcatcgtcgggca	Protospacer
   * **** ******* **********.

133. spacer 3.23|568308|32|NZ_AP019796|CRISPRCasFinder matches to MK388689 (Pantoea phage vB_PagM_LIET2, complete genome) position: , mismatch: 10, identity: 0.688

acgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
ggagtatcagcaggcaacaccggcacccgttg	Protospacer
. .. .*** ****** ************ *

134. spacer 11.58|2078550|37|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015740 (Shinella sp. HZN7 plasmid pShin-04, complete sequence) position: , mismatch: 10, identity: 0.73

ttcgatgagcacgccgccgaaatcgaa-cttgcggtga	CRISPR spacer
gtcgatcagcacgccgccgatatcgaagaccacaatg-	Protospacer
 ***** ************* ******  ...*..**

135. spacer 11.47|2077814|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 11, identity: 0.694

acacgacggtgcggcttgccgcgcgcgcctgctgca	CRISPR spacer
aagttgcggggcggcttgccgcgagcgcctgccttg	Protospacer
* .. .*** ************* ********. ..

136. spacer 11.67|2079151|35|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 11, identity: 0.686

aagcgccgccttttgcgccttgcgcagcgccttga	CRISPR spacer
gctgatcgccgattgcgccttgcgcagcgcccggc	Protospacer
.   ..****  *******************. *

137. spacer 11.52|2078146|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 12, identity: 0.667

gccgcccgcgcggcatctcgtggtggattttgaatc	CRISPR spacer
catattggcgcggcatctcgtcatggattttgacat	Protospacer
  .... ************** .**********  .

138. spacer 11.52|2078146|36|NZ_AP019796|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 12, identity: 0.667

gccgcccgcgcggcatctcgtggtggattttgaatc	CRISPR spacer
catattggcgcggcatctcgtcatggattttgacat	Protospacer
  .... ************** .**********  .

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP019796

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection