CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP019797	Rhodothermus marinus strain AA3-38	15 crisprs	csa3,DEDDh,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,c2c9_V-U4,cas14j,WYL,cas6,cas8b1,cas4,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1,csx20,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cmr1gr7,cas3HD,DinG	1	76	0	0

1. NZ_AP019797

CRISPR-Cas detection and classification

Crispr_ID: NZ_AP019797_1

• CRISPR_ID: NZ_AP019797_1
• CRISPR_location: 83427-83519
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019797_1

Consensus_repeat	Method
CGGCGGCCCTTGCAGGTCTCGCAG	CRISPRCasFinder

spacers of NZ_AP019797_1

>1.1|83451|45|NZ_AP019797|CRISPRCasFinder
GTCACGTGCACGTCCGGCAGGAAGTTCATCTCCAGCTTCACCACG

CRISPR arrays and Neighbor proteins around NZ_AP019797_1

CRISPR arrays

The CRISPR arrays of NZ_AP019797_1

>merge|NZ_AP019797|1|83427-83519|CRISPRCasFinder
CGGCGGCCCTTGCAGGTCTCGCAGGTCACGTGCACGTCCGGCAGGAAGTTCATCTCCAGCTTCACCACGCCGGCGCCCTTGCAGGTCTCGCAG

>NZ_AP019797|1|1|83427-83519|CRISPRCasFinder
CGGCGGCCCTTGCAGGTCTCGCAG	GTCACGTGCACGTCCGGCAGGAAGTTCATCTCCAGCTTCACCACG
CCGGCGCCCTTGCAGGTCTCGCAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_014065812.1|78193_78445_-|50S-ribosomal-protein-L31	unknown	unknown	gnl|CDD|376487
NZ_AP019797.1|WP_161540030.1|78527_80411_-|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl|CDD|236451
NZ_AP019797.1|WP_161540040.1|98658_99444_+|PspA/IM30-family-protein	unknown	unknown	gnl|CDD|224755
NZ_AP019797.1|WP_012842604.1|86583_86901_+|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	unknown
NZ_AP019797.1|WP_014065819.1|85909_86503_+|MarC-family-protein	unknown	unknown	gnl|CDD|225006
NZ_AP019797.1|WP_161540036.1|93391_94390_-|voltage-dependent-potassium-channel-subunit-beta	unknown	unknown	gnl|CDD|381369
NZ_AP019797.1|WP_161540031.1|80918_81428_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540027.1|69954_71460_-|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl|CDD|236447
NZ_AP019797.1|WP_161540037.1|94455_95373_-|3-methyladenine-DNA-glycosylase	unknown	unknown	unknown
NZ_AP019797.1|WP_161540034.1|89712_90771_+|hypothetical-protein	unknown	unknown	gnl|CDD|274305
NZ_AP019797.1|WP_161540026.1|69523_69952_-|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl|CDD|213395
NZ_AP019797.1|WP_161540025.1|67945_69523_+|chemotaxis-protein	unknown	unknown	gnl|CDD|214599
NZ_AP019797.1|WP_161540033.1|86981_89429_-|glycoside-hydrolase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|379625
NZ_AP019797.1|WP_161540029.1|75562_78076_-|glycoside-hydrolase-family-9-protein	unknown	unknown	gnl|CDD|199881
NZ_AP019797.1|WP_161540038.1|95494_95677_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540039.1|95792_98558_+|insulinase-family-protein	unknown	unknown	gnl|CDD|223685
NZ_AP019797.1|WP_161540028.1|71712_74217_+|zinc-carboxypeptidase	unknown	unknown	gnl|CDD|349457
NZ_AP019797.1|WP_014065810.1|74220_75561_-|thymidine-phosphorylase	unknown	unknown	gnl|CDD|180276
NZ_AP019797.1|WP_161540035.1|90790_93121_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|274856
NZ_AP019797.1|WP_161542333.1|81699_82785_+|hypothetical-protein	unknown	unknown	gnl|CDD|271326

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_014065812.1|78193_78445_-|50S-ribosomal-protein-L31	gnl|CDD|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	3.08907e-31
NZ_AP019797.1|WP_161540030.1|78527_80411_-|phosphomethylpyrimidine-synthase-ThiC	gnl|CDD|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_AP019797.1|WP_161540040.1|98658_99444_+|PspA/IM30-family-protein	gnl|CDD|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	1.41651e-10
NZ_AP019797.1|WP_014065819.1|85909_86503_+|MarC-family-protein	gnl|CDD|225006	COG2095, MarC, Multiple antibiotic transporter [Intracellular trafficking and secretion].	7.63581e-34
NZ_AP019797.1|WP_161540036.1|93391_94390_-|voltage-dependent-potassium-channel-subunit-beta	gnl|CDD|381369	cd19143, AKR_AKR6C1_2, AKR6C family of aldo-keto reductase (AKR). Voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa are founding members of aldo-keto reductase family 6 member C1 (AKR6C1) and C2 (AKR6C2), respectively. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	0
NZ_AP019797.1|WP_161540027.1|69954_71460_-|F0F1-ATP-synthase-subunit-beta	gnl|CDD|236447	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated.	0
NZ_AP019797.1|WP_161540034.1|89712_90771_+|hypothetical-protein	gnl|CDD|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	2.00129e-13
NZ_AP019797.1|WP_161540026.1|69523_69952_-|F0F1-ATP-synthase-subunit-epsilon	gnl|CDD|213395	cd12152, F1-ATPase_delta, mitochondrial ATP synthase delta subunit. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.	4.07885e-45
NZ_AP019797.1|WP_161540025.1|67945_69523_+|chemotaxis-protein	gnl|CDD|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.48867e-40
NZ_AP019797.1|WP_161542333.1|81699_82785_+|hypothetical-protein	gnl|CDD|271326	cd14956, NHL_like_3, Uncharacterized NHL-repeat domain in bacterial proteins. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	1.69357e-05
NZ_AP019797.1|WP_161540029.1|75562_78076_-|glycoside-hydrolase-family-9-protein	gnl|CDD|199881	cd02850, E_set_Cellulase_N, N-terminal Early set domain associated with the catalytic domain of cellulase. E or "early" set domains are associated with the catalytic domain of cellulases at the N-terminal end. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually categorized into either exoglucanases, which sequentially release terminal sugar units from the cellulose chain, or endoglucanases, which also attack the chain internally. The N-terminal domain of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others.	1.63695e-20
NZ_AP019797.1|WP_161540039.1|95792_98558_+|insulinase-family-protein	gnl|CDD|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	4.09145e-86
NZ_AP019797.1|WP_161540028.1|71712_74217_+|zinc-carboxypeptidase	gnl|CDD|349457	cd06238, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	6.84337e-107
NZ_AP019797.1|WP_014065810.1|74220_75561_-|thymidine-phosphorylase	gnl|CDD|180276	PRK05820, deoA, thymidine phosphorylase; Reviewed.	0
NZ_AP019797.1|WP_161540035.1|90790_93121_+|S8-family-serine-peptidase	gnl|CDD|274856	TIGR03921, T7SS_mycosin, type VII secretion-associated serine protease mycosin. Members of this family are subtilisin-related serine proteases, found strictly in the Actinobacteria and associated with type VII secretion operons. The designation mycosin is used for members from Mycobacterium. [Protein fate, Protein and peptide secretion and trafficking, Protein fate, Protein modification and repair].	7.5179e-17
NZ_AP019797.1|WP_161540033.1|86981_89429_-|glycoside-hydrolase-N-terminal-domain-containing-protein	gnl|CDD|379625	pfam14498, Glyco_hyd_65N_2, Glycosyl hydrolase family 65, N-terminal domain. This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain.	6.78563e-57

Protein sequences

>NZ_AP019797.1|WP_161542333.1|81699_82785_+|hypothetical-protein
MWVVVAGAFLCGCGAEKPAEVRAMLVPVDTIHLQEPDTLFLGEFLWVEVELQPFRLYVPDLRLRRVVVYDSLGRPVQVIGRPGTEAPGTLYRAVQVLVHGELVYVQQEYSRVSRFTKTGRFIDRPQLPEGYGLNAGFRSLDEGHLVVPSVAMSEPCSSWLEPACEETRAFSVVDTGLNQVVYRFGVYPQLYQEGNYVPRRAATDVLPEARLAAAVYELSSELQLYFLGEREGRLVRRIVLRHPAWRDPPEDMRAELAVNDRARFNELMLQSSFMKRVFFVADTLVLAHFFNLKPLYFELQGWDDRKVMPYGVLASISGRWQQPLDMPGLVLGRDEAFHLYIRLSDEPDRRLIGRFRVEVRR
>NZ_AP019797.1|WP_161540031.1|80918_81428_+|hypothetical-protein
MSAVQKIGLGLLLLALSWGLHAWRLHRSVPEVPFPSEALVPVWTPAENSEPTDAAGEVLLFFSPNECGQTVARTARAWVEGAHALGFRVVGILEDRGRELARRYAAVMGFPFGVWWDSLGWYGRHFGEAALPRALVRREGRVVGELGPEVLRTVGDASSVRLLLLGDHR
>NZ_AP019797.1|WP_161540030.1|78527_80411_-|phosphomethylpyrimidine-synthase-ThiC
MIPKPPAAIRRVYVQGNRYPELRVPFKEVQLSPTRLPDGSLEPNDPVLLYDTRGPWGDPDFHGDIRQGLPPLRRPWIEARGDVEEYDGRPVQPIDDGYRNEEERRRAEQRGKLHRWPGPRRRPLRGKNGAAVTQMYYARQGIITPEMEFVAIRENQRRERLIELQKEPGDRWSLAFQHPGQPWGAQIPPVITPEFVRDEVARGRAIIPCNVNHPECEPMIIGRNFLVKINANIGTSAVSSSIDEEVEKLLWAIYWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVGGKPEELTWEIFRDTLIEQCEQGVDYMTIHAGVRLAYIPLTANRRTGIVSRGGSIIAKWCLAHHRENFLYTHFEEICEILRQYDVSISLGDGLRPGSIQDANDEAQFAELKTLGELTRIAWKYDVQVMIEGPGHIPMHLIKENVDRELEDCYEAPFYTLGPLVTDIAPAYDHITSAIGAAMIGWYGAAMLCYVTPKEHLGLPNKNDVREGVIAYKIAAHAADLAKGHPGAQYWDNALSKARFEFRWEDQFNLSLDPERAREYHDETLPAEGAKLAHFCSMCGPKFCSMKITEEIRAMAAEKGVDARQVIEEGLEEKAREFRAKGAEIYTAP
>NZ_AP019797.1|WP_014065812.1|78193_78445_-|50S-ribosomal-protein-L31
MKKGLHPEYNLITVRLADGTEFQIRSTMKGPVYVSDVDATNHPFYTGVRQFVDRAGRVEKFMRRYGKVTSQGHQKPEAEEEGK
>NZ_AP019797.1|WP_161540029.1|75562_78076_-|glycoside-hydrolase-family-9-protein
MRRYLLLLSWLLVRPGFGQSEGFVLNEREYFEREGVSVMVFQDFYPEGHQSGVTLIQHGERVAANGDVRLEATPGQWQPVPRLLRREVHPERNEVVAYLAYPDPERDRKGFNPIFYPDLHLTYRVRVRGEADGVRIIVDLDEPLPEAWAGRVGFNLELFPGALFGKSWYMDDAAGIFPRQPNGPVRVNDAGEVEAVPLATGRRLLVAPESDALRLEIESLRGELVLYDGRVQHDNGWFVVRTTIPAGVTTNALEWVVRPHVIPGWRYGPVLQVSQVGYHPRQPKVAVLELDARDDLQGTVYLLRLGNDGATDTVLAGPPVPWNGRFLRYRYAHFDFSHVTRPGLYVLTFRDVRSHPFRIAPDVYQRHVWQPTLEFFLPVQMCHMRVEQQYRVWHGACHLDDARMAPPDTNHIDGYVQGPELRAPYAPGEHVPGLNVGGWHDAGDNDLRIESQADEVFILATMYELFDVLKTYDNTTINQRRRLTQIHQPDGRPDVLQQIEHGVLSILGGYRALGRLYRGIIAPTLKQYVLIGDPANSTDNRVYDPSVPPETLSALRVDARDPRWVVTTADDRWVFTESNPAHEYKGIAALAAAGRVLRSYNPELARACVEAAEALWQQERDTSRGFNERVVAAVELFRTTGRDLYRRTLLNDRNRIVARIGSVGWAVGAILPTLGDSAFAEAVRAAVARYMDDVHRLQQENPYGVPYRPRIWGAGWDIQRFGVRQYLLHRAFPDLVPPDYVFNALNFVLGVHPGRNTAAFASGVGARSVTVAYGFNRADWTYIPGGVVSGTALIRPDFPELKEFPYLWQQAEYVMGGGATHFMLLVLAADQLLNATH
>NZ_AP019797.1|WP_014065810.1|74220_75561_-|thymidine-phosphorylase
MPDVVELIITKRDGGHLAPNDLRWLVQAYTHDEVPDYQMSAFLMAAFIRGLNEAEMDALTDAMLHSGRVLDLSDLPGRKVDKHSTGGVGDKVSLILAPLVAACGVPVPMISGRGLGHTGGTLDKLESIPGLRTDLSIEAFRRQLRELGVVMIGQTDEIAPADRKLYALRDVTGTIESIPLIAASILSKKLAEGADALVFDVKCGRGAFMQQEADARRLAETLVGIATRAGRPAVAWLTDMNVPLGRAVGNWPEVVESLRALRGDFEGIEDLIEVTLALAGEMLWLGGVAETPEAGRRLARAALTDGRAFERFCAMVRAQGGDVRVLERPETRPDAEPAGEVRAPDGIRGYVADLDARAVGRLAVHLGAGRRVKEDPVDPTAGLVLHRKPGDPVAPGDVLATLYTHRRDRLEDFQQALLAAYRFAETPPPARPLLLARYAEGRWRTP
>NZ_AP019797.1|WP_161540028.1|71712_74217_+|zinc-carboxypeptidase
MQKIRRACLLVALGLAPALAAQPLQSPEEFLGYPPGARFTPHHRVVDYFEYVARTSPRVQLVQYGETYEGRPLLLAIISSPENLARIEALREDNLRRAGRLSGTPDPDGPVFVWLSYNVHGNEAVSTEAALLTLYALAHPDSQRTDAWLKQAVVLLDPCLNPDGRERYVQWYHRMLGVRPDPDPVAREHHEPWPGGRTNHYYFDLNRDWAWGTQQETQARLAVYHRWMPQIHVDFHEQGVDEPYYFAPAARPIHPLITDWQRALQDTIGRNHARYFDADGRLYFTREVFDLFYPGYGDTWPTFNGAIGMTYEQGGGGRAGLAIRTAEGDTLTLAERIRNHYTTGLSTIETAVRQRRTLLDRFARYFAEAQAQPAGRYRAFLIRGDAHPDRLAALTALLDRQGIRYGTLARTRTVEGLDYATGTRQRVEARPGDLVVSVYQPAGTLARVLFDPDPVLPDSLTYDITSWTLPYAFELEAYALSERLEPDRPGWARPTPTPPSEAQPYAYLVRWGGLDAARFLADVLRRGVRVRVTEVPLTLNGRRFEAGTLILTRAGSEHLGTRFDRIVREAADRWHQQLYTTRTGFVDEGPDLGSARVRFLRKPRVYLLAGPPASAYAVGEIWHFFDQVLHYPVTLVERDELDELLLDEGDVLILPHGFYNAREMPLESLLEGVRRGARLIALEGALDLLAGQQGVALKRRQGDDSEQDTAARPRRYAMREREAISDQVPGAVYRVQLDPTHPLAFGLARYFTLKRSTRAYELLEDGWNVAWLEDGRPRSGFAGYRTVERLRETLVVGTQRLGRGTLVFFVDDPLFRGFWHAGQLLFANAVFFGE
>NZ_AP019797.1|WP_161540027.1|69954_71460_-|F0F1-ATP-synthase-subunit-beta
MEIKTDQAVGRVVQIIGPVVDVEFPEGHLPEIYDALVITLEDGSELVLEVEQHLGENRVRAIAMDSTDGLTRGTPVRNLDRPISVPTGTEIRGRLFNVVGQAIDGLPQPKAEGYRPIHAPAPPFEELATRVEMLETGIKVIDLIQPVMRGGKVGLFGGAGVGKTVLIMELINNIAKAHEGLSVFAGVGERTREGNDLLREMLESKVIRYGEEFLESMKAGGWDLSKVDFEELKKSQATLVFGQMNEPPGARARVALTGLAIAEYFRDLGGRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQERITSTKHGAITSFQAIYVPADDLTDPAPATTFAHLDATTVLSRQLAAQGIYPAVDPLESTSRILDPNIVGEEHYRVAQEVKQILQRYKELQDIIAILGMDELSEEDKLVVHRARRVQRFLSQPFFVAEQFTGIPGKYVKIEDTVRGFRMILDGELDHLPERAFLLRGTIEEVIEAGEKMLKEAEA
>NZ_AP019797.1|WP_161540026.1|69523_69952_-|F0F1-ATP-synthase-subunit-epsilon
MARTLFVEIVAPDRRVFRGEALSVRAPGVEGSFEVLYNHAPMVAAITVGPIFVTTPSGERITFATSGGFVEVLGNTVTILAETAEPASEIDIERARAAEQRALERLQKAQTPEERAEAEAALERARNRLRVAMGQVGQRIHP
>NZ_AP019797.1|WP_161540025.1|67945_69523_+|chemotaxis-protein
MEVAEKETKLATAALHPEVAETFHALQQVITRAAIGAARTAQRLERIGQQFSEARAGVEASARAVQQIRQRVEAVAESARSTADVAHQVARLTEEGRQQSDASQEAVKHLEQQVAAVMERLERLVAQVQGITQISDVIDRIAWKTKLLAFNAGIEAARAGHEGQGFSVLANEIKTLSEDTALQTRQIRALINDLVKELQPVEEAIRQSQELLHTTVEQSDRLEAALQRIHELAGQAAQHMDRVVTTVDAQLQDAEAVGTTLQQALAAVGHVDKEAEHIARDTFTLSELVEDAYGYLGRFEGRSIFHRALALGRELAERSRRIFEQVIDEGRCTLDDVLALEYTEIKGRKAIASLARLFDVSRVPESGFDPPKYSTRYDHLVDEALQQVMDEILEREPRLTFALVIDLNSYAPIHNRRFCQDWTGDPKKDLVGNRIKRFFFDKGVLVRGARVGLPRAAVTLPNRARREDFLRVCDLRERPEERDVFLVQTYARDTGQVLSALTVPLYVKGHRYGAVLLGWDPERVD
>NZ_AP019797.1|WP_014065819.1|85909_86503_+|MarC-family-protein
MNAYLETFLPLFVAINLPGILPFFISMTEGLSAADRRRLLVRAVATAFVVAVLILFAGQLIFETLGITLNDLRVGGGLILLVLSITDLVFADYRRRDPRDGADAADVGVVPLGIPLIIGPAAITTILVAQQTYGYLPTLVSLVANLLLVTVAFAAGPWVIRKLGPVAVRAIAKVASLFLAAIAVAMIRAGVAGMLAG
>NZ_AP019797.1|WP_012842604.1|86583_86901_+|DNA-directed-RNA-polymerase-subunit-omega
MALKTLDIDALAAKTGNLYETVAILSKRARQIATQMKQELDEKLSYFEGLGLEDDPRHQEEQRRISIEYELKPEPTEIAVEEFLRDEIYYRDASKERSEEEEELR
>NZ_AP019797.1|WP_161540033.1|86981_89429_-|glycoside-hydrolase-N-terminal-domain-containing-protein
MDRRDFLKGMGLALVAGPYWLRRALVQPSALSSPFVEARIPERGMYSLQPAARWEEALVAGNGTLGILVYGDPLNERIIFNHELLYEPLRDERVPPPNLAPYLPRIRALMLEGRYREAVAYSLEMARREGWPGLLWTDPYHPAFALVLEMPTETPTEYLRHTAFDTGEIGVFWRTATDTYTRRAFVSRTDGVVVLELSAEAGPLPDLTLHLEVQDVRPPEQREGYHPPEITAAPGWLRYRCAYVHTRRGYEGLVRVEAEGGTQTVRDGRLHVRGARRVLLLVRVWPLDDVAASRLAEEQAALAALPADYDLLFAPHAAAHGALFRRMTLDLEAGDDRRKSSETLLAEQRARETILPALLEKLFDMGRYVLISSCGHWPPNLVALWTGEWRPPWSGDFTLDANLNLQMAAASIGAVPEAVASLTRLLEGLLDDWRDNARRLYGCEGVLSGSRTDGRCGWHTHFNADYPLHFWTAGAGWLAQPLYEYAEVYGDEAFVREHLIPYLKEVVRFYETFLTVTDAEGHVVFVPSYSPENRPGNLDTPGSINATMDIAVCREVLSTLIALCEARGLEADSLPRWKALLDRLPPYLINEDGALKEWAHPDLADNYNHRHLSHLYPVWPGHEITPEATPELFEAARRAAYLRGHENDSAHGLVHLALIGARLKDPDLAYRSLRDLIRNGYLLPSLFSLHYPGNVYNADLINSLPAIVIEMLLYSRPGLLELLPAVDERLPRGTLHGARARGRLRVERLRWDLPARHVELALVSDTDRTLTLRVRRGIAELQATEGPTPERTSATDATLQLAARTPATLQIRLAG
>NZ_AP019797.1|WP_161540034.1|89712_90771_+|hypothetical-protein
MRKLRWNWSSLWMAGLLLAACSLFEPEKKTRFDYGGDPLPGTENLYNLRLSPDGEWVALIRAYTPERLDPPNQLWLVHRDGQQMRFLGPSIGSADWSPDGKRLALTYEPGLCCDVHVVTLDLESGQVVVWTGADTLLLSHPTASFPHWFQDGQRLLVSVIGKAYGQLYETGIYVLNLVHRQVEGPLVKSMVGAQLGGRDRFAVGIMPQPQGRVYRENAVRYEFATGALTVLTDFGPEEAFRFEATPSPVEDLIVLERRVEGVPQLFLMDGKGRILRQLTERGGHNPRWSYDGRAVLFLRDVEAGPGARNVPFVYWLDEDREEPLWPMLPDSVPAFPALDTLLAQCMLCGKLP
>NZ_AP019797.1|WP_161540035.1|90790_93121_+|S8-family-serine-peptidase
MYRGYNLGQAMTLTLLMIIGLQEGRAQIIPNDPLFPQQRPYLSEIHRIDQAWQISRGSSSTRIGIYSFVGLRTSHEDLQGRVLAPVGINEHPELDVATEMAGIIGANTNNGKGIAGIDWNTRLQFYSLLRPPRADDLLDGRFTIRLPGGANATYYLDLRKASEMLEQGRNNGVHIHLFSFGLPSGKAEDYPLPEPPQTWEYLNMPRPIKLEDIGKKILEAAKKVLQSYCSDAEPFSWILGSCYSPPDPFKLFRESIGRAVQAGGIVIAPAGDLEDENLLPTEFQPGQFEKYAVTVGGVTRDPIRRVVPWAYTRPANYVDVAAFAGPVIGPSGQGDQIYNFSFTSTAAAASIAAGVSALIKAVRPELSGEDVEQILRRTANGYNQPVPNEHMGYGVIDARAALEFVVNNDIQRIKKRVDRVITNAPMPPGGQEWIYLKDFPLQYFPRSYCPYAFYAYGKRYEFTARVEFPRPFEASPQVWVRWADSDGVDTRFKLADGGVPPFAEYIATYDPFWKDLTVISVDRNGFVIKGRYWYVRFYDALGRECTVTNYIPKRPEQFQIAYTAVGRLSSVSPPPAPANLRITNRGAVGAMPRLEWNASPGAEGYYLYRRCANNWTCQNFQRIATTTGTSWIDSGVIQGTYQDYYTYQVTAYNVAGESAPSNQVSTYGAPFTPYSLEALSDSLQLVRWVPETFALRVIGPNPFSTTAILELDLPEATQVQLIIFDVLGREIVRPIDQFYEAGRHRIRVWGENWPPGMYLYRLEAGNWVHTGTLVRR
>NZ_AP019797.1|WP_161540036.1|93391_94390_-|voltage-dependent-potassium-channel-subunit-beta
MEYRHLGRSGLKVSALSFGAWVTFGDQIDEGLAEECMHAAYEAGVNFFDNAEAYAGGKAEIMMGNILKRSGWKRSDLVISTKIFWGGKGPNDVGLSRKHIIEGTKAALERLQLDYVDLIFCHRPDPETPIEETVWAMNYVLDQGWAFYWGTSEWSAEQIRYAYEFARREHLIPPTMEQPQYNMFHRVRVEREYAPLYRDYGLGLTTWSPLASGILTGKYNEGIPEGSRMSLPGYEWLRKRLESEEGRRQIEKVRRLMPIAEELGCTMAQLAIAWCLKNPNVSTVITGASRPEQVHQNMQALEVARRLTPEVMERIEAILENRPEPEINWRER
>NZ_AP019797.1|WP_161540037.1|94455_95373_-|3-methyladenine-DNA-glycosylase
MAGPPIHTVLTEAEARARAAAHEARLRPVLDPYLAARRRGAKQPVMDFLFEYYTFRPSRLLRWRPGLGVAVQGAEARRWLEDPDFVETPKGVTVDPGRFPAHRIPSLRWVVTLLERTAARRPHLGCCGMHEWAMVYRTERPRHAHVPLRMDPDALAAFVESHPITCTHFDAFRFFTEAARPLNRFQPTRDTIHELEQPGCLHANMDLYRWAYKFYPWVGSDLIADAFLLACRIRTLDMQASPYDLRAYGLEPIPIETPEGRRRYRALQEQFYREAQPIRRRLLQTLRTLLELAVTNAPTTADGVA
>NZ_AP019797.1|WP_161540038.1|95494_95677_+|hypothetical-protein
MKRVFRALLLSALATGAFAWVLSRLHPRPKPAAVRPGEVDADKLSPEAQERLLEELDRLL
>NZ_AP019797.1|WP_161540039.1|95792_98558_+|insulinase-family-protein
MNLLRRLSAGLLLLLCTMPAFAQTEEATDIPVEIPYEKFVLDNGLTLIVSPDHKAPIVAVNIWYHVGSKNEKPGRTGFAHLFEHLMFNGSEHFNDDWFQALERVGATDLNGTTNRDRTNYFQTVPVNALDLVLWLESDRMGHLLGAIDQAKLDEQRGVVQNEKRQGENQPYGKVFNIIAEHTYPEGHPYSWPVIGYMEDLDAATLEDVHEWFKTYYGPNNATIVIAGDIDPQTALEKVKKYFGSIPPGPPLAKPKAWVAKRTGEQRMTMEDRVPQARLYKVWNVPEWGHPERDYLDLAADVLASGKTSRLYRRLVYTDQIATDVNAFVYTGEIGSQFMIIATARPGVPLEKVEQAVDEELARFLQEGPTADELERVKADFIAGFIRGVERIGGFGGKSDILAQYEVYGGDPGLYKVTLRRMQQATPAQVLEAARKWLSDGVFVLEVHPYPKLQASGEDVDRSQLPPVGTPPEVSFPEVQQATLSNGLKVLLVERHAVPVVNFQLILDAGYAADQFARPGTATLAMNMLDEGTTSRTALEISDELDRLGARLSTGSDLDVSTVYFSALRDKLDPSLELFADVVLHPAFPEADFQRLKQQQLVAIQREQVSPVQMALRVFPRLLYGENHAYGLPLTGSGTPESVQQITRDDLVRFHQTWFKPNHATLVVVGDITMDELLPKLERLLAEWNPGDVPQKNIQDVPQKDRSVVYLIDRPGSEQSIIFAGHVAPPEANPRELAIKAMNTVLGGAFTSRINMNLREDKHWSYGARSMLMSARGPRPFIVYAPVQTDKTAPAMLEIKKELDGIVNGQKPVTPEELDKVQRNLTLRLPGRWETANAILDDLSYVVQFGWPLDYWRTYPDAVRALTLEDVNAAAREVLHPDRLVWVVVGDRSRIEDEIRQLELGPVYLIDTEGNLLASLSE
>NZ_AP019797.1|WP_161540040.1|98658_99444_+|PspA/IM30-family-protein
MSLWARFKRWIRSIFGGAISALEDPRLILEQNIRELNDQIPKMNENIATVKANVLLLQKEVRRNEQEIERLVARIKAAIQAGRDDIAQQYAIQLQKAKETLARTKEQLQYAEAAYEKALQVKQAFLREKERKIQEAKEALRAHERAKWQAKVADALEQFEVGGLDQTHEEMVQRLREETARSEARLELALDSVDADALKIEADAEALRAAELVRQFKLEMGLLEPEQKPALESPAREAEQEASEQAREPEETKTIGRQRTR

Crispr_ID: NZ_AP019797_2

• CRISPR_ID: NZ_AP019797_2
• CRISPR_location: 345938-346038
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019797_2

Consensus_repeat	Method
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT	CRISPRCasFinder

spacers of NZ_AP019797_2

>2.1|345970|37|NZ_AP019797|CRISPRCasFinder
TCGAAGTGCGGTAGGACTTGATATTATCAGATGCAGC

CRISPR arrays and Neighbor proteins around NZ_AP019797_2

CRISPR arrays

The CRISPR arrays of NZ_AP019797_2

>merge|NZ_AP019797|2|345938-346038|CRISPRCasFinder
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGATTCGAAGTGCGGTAGGACTTGATATTATCAGATGCAGCGGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT

>NZ_AP019797|2|2|345938-346038|CRISPRCasFinder
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT	TCGAAGTGCGGTAGGACTTGATATTATCAGATGCAGC
GGTGCCGGTTGCAGATGCCGAGCGTAAGCGAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161540219.1|344880_345534_+|DUF2459-domain-containing-protein	unknown	unknown	gnl|CDD|378218
NZ_AP019797.1|WP_014066018.1|339343_339850_+|preQ(1)-synthase	unknown	unknown	gnl|CDD|237320
NZ_AP019797.1|WP_161540217.1|341661_343038_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|237354
NZ_AP019797.1|WP_161540229.1|367714_368986_+|hypothetical-protein	unknown	unknown	gnl|CDD|271320
NZ_AP019797.1|WP_161540215.1|338733_339204_-|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl|CDD|376501
NZ_AP019797.1|WP_161540225.1|359845_362044_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_AP019797.1|WP_161540212.1|336132_337026_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540226.1|362114_363731_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540222.1|351729_354132_+|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl|CDD|224423
NZ_AP019797.1|WP_161540224.1|357643_359818_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540213.1|337353_338055_-|radical-SAM-protein	unknown	unknown	gnl|CDD|275301
NZ_AP019797.1|WP_161540221.1|350829_351666_-|DUF2726-domain-containing-protein	unknown	unknown	gnl|CDD|371282
NZ_AP019797.1|WP_161540228.1|366647_367712_+|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540220.1|346853_347852_+|transposase	unknown	unknown	gnl|CDD|379252
NZ_AP019797.1|WP_161540216.1|339846_341604_-|dynamin-family-protein	unknown	unknown	gnl|CDD|206739
NZ_AP019797.1|WP_161540218.1|343075_344791_-|dihydroxy-acid-dehydratase	unknown	unknown	gnl|CDD|234861
NZ_AP019797.1|WP_161540223.1|354204_357348_-|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|379297
NZ_AP019797.1|WP_161540214.1|338057_338774_-|7-cyano-7-deazaguanine-synthase-QueC	unknown	unknown	gnl|CDD|284031
NZ_AP019797.1|WP_161540227.1|363727_366643_+|TonB-dependent-receptor	unknown	unknown	gnl|CDD|372685
NZ_AP019797.1|WP_161540211.1|332443_336097_-|hypothetical-protein	unknown	unknown	gnl|CDD|276808

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161540219.1|344880_345534_+|DUF2459-domain-containing-protein	gnl|CDD|378218	pfam09601, DUF2459, Protein of unknown function (DUF2459). This conserved hypothetical protein of unknown function is found in several Proteobacteria. Its function is unknown and its genome context is not well-conserved. It is found amid urease genes in at least one species.	2.37984e-54
NZ_AP019797.1|WP_014066018.1|339343_339850_+|preQ(1)-synthase	gnl|CDD|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	1.35997e-39
NZ_AP019797.1|WP_161540217.1|341661_343038_-|AAA-family-ATPase	gnl|CDD|237354	PRK13341, PRK13341, AAA family ATPase.	0
NZ_AP019797.1|WP_161540229.1|367714_368986_+|hypothetical-protein	gnl|CDD|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	9.56384e-13
NZ_AP019797.1|WP_161540215.1|338733_339204_-|6-carboxytetrahydropterin-synthase	gnl|CDD|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	1.18678e-31
NZ_AP019797.1|WP_161540225.1|359845_362044_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	1.19839e-08
NZ_AP019797.1|WP_161540222.1|351729_354132_+|prolyl-oligopeptidase-family-serine-peptidase	gnl|CDD|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	4.92552e-63
NZ_AP019797.1|WP_161540213.1|337353_338055_-|radical-SAM-protein	gnl|CDD|275301	TIGR04508, queE_Cx14CxxC, 7-carboxy-7-deazaguanine synthase, Cx14CxxC type. In the pathway of 7-cyano-7-deazaquanine (preQ0) biosynthesis, the radical SAM enzyme QueE is quite variable. This model describes a variant form in which the three-Cys motif that binds the signature 4Fe-4S cluster takes the form Cx14CxxC, as in Burkholderia multivorans ATCC 17616. The crystal structure is known.	4.33657e-66
NZ_AP019797.1|WP_161540221.1|350829_351666_-|DUF2726-domain-containing-protein	gnl|CDD|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	8.25566e-10
NZ_AP019797.1|WP_161540220.1|346853_347852_+|transposase	gnl|CDD|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.49017e-12
NZ_AP019797.1|WP_161540216.1|339846_341604_-|dynamin-family-protein	gnl|CDD|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	2.91749e-69
NZ_AP019797.1|WP_161540218.1|343075_344791_-|dihydroxy-acid-dehydratase	gnl|CDD|234861	PRK00911, PRK00911, dihydroxy-acid dehydratase; Provisional.	0
NZ_AP019797.1|WP_161540223.1|354204_357348_-|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	4.15875e-23
NZ_AP019797.1|WP_161540214.1|338057_338774_-|7-cyano-7-deazaguanine-synthase-QueC	gnl|CDD|284031	pfam06508, QueC, Queuosine biosynthesis protein QueC. This family of proteins participate in the biosynthesis of 7-carboxy-7-deazaguanine. They catalyze the conversion of 7-deaza-7-carboxyguanine to preQ0.	2.13531e-87
NZ_AP019797.1|WP_161540227.1|363727_366643_+|TonB-dependent-receptor	gnl|CDD|372685	pfam13715, CarbopepD_reg_2, CarboxypepD_reg-like domain. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with pfam07715 and pfam00593.	6.77211e-25
NZ_AP019797.1|WP_161540211.1|332443_336097_-|hypothetical-protein	gnl|CDD|276808	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. YbbN is a thioredoxin-like protein containing two tandem TPR repeats at the C-terminus, separated by two alpha helices. Its N-terminal thioredoxin-like domain is not a functional oxidoreductase. It functions in heat stress response and DNA synthesis as a chaperone or co-chaperone.	7.90199e-06

Protein sequences

>NZ_AP019797.1|WP_161540219.1|344880_345534_+|DUF2459-domain-containing-protein
MNRKRFFLLGLTLLLVGLAVAQERRFRIYLIHHGWHAGIAFCQADLEGTDWPAEAFFPERRFVEVGWGEAGYYPDPDPGAGDALRAALWPTDAVLHVAAFDHPPALIFKGPVRQIDLDSTAFRRLVAYVADYFKRDAQGRLKPVAPGLYGMESQFYAAEGRYHLFNNCNHWVARALRAAGLSVHPARALTLGDLWRQLEPLSQAASPEAAGCLSNIR
>NZ_AP019797.1|WP_161540218.1|343075_344791_-|dihydroxy-acid-dehydratase
MPPLNRYSRRITQPKSQGASQAMLLATGLKEEDLDKPQIGIASVWYEGNPCNMHLLDLAAEVKAGVQEAGMVGFRFNTIGVSDGISMGTEGMSYSLPSRDLIADSIETVMAAQWYDGLIALPGCDKNMPGCVIAMGRLNRPSLMIYGGTIRPGCLNGQKLDVVSAFQSYGEYLAGKITDEQRRAIIRHACPGPGACGGMYTANTMAAAIEAMGLSLPFSSSLPAEDPRKREECRRAGHVMRQLLERDLKPRDIVTRASLENAIAVVMALGGSTNAVLHLLAIAHAFDLPLSLDDFQRIARRVPLLADMKPSGRYVMEDLCRIGGVPAVMKLLLEHGVLHGDALTVTGKTLAENLADVPDLPEDQDIIRPWDNPIKSSAHIYILYGNLAPGGCVAKITGKEGLRFSGPARVFDSEEDMLAGLEAGRIQRGDVIVIRYEGPKGGPGMPEMLTPTSALMGAGLGKDVALITDGRFSGGSHGFIIGHVVPEAQEGGPIALVRDGDIITIDAEAGLIHMDVSDEELARRRAAWTPPPLKVTRGALFRYVQTVQDASRGCITDAPIGEPQPAGSPTT
>NZ_AP019797.1|WP_161540217.1|341661_343038_-|AAA-family-ATPase
MADLFQQAAERLLAAQAPLAERMRPRTLDEFVGQEHILGPGKLLRRAIEADRLSSLIFYGPPGTGKTTLARIIARTTRAHFTALNAVLAGVKDIRDAIEAAQERLRLHQQRTILFIDEVHRFNKAQQDALLPHVENGTVIFIGATTENPYFEVIKPLVSRSRVFELKPLTPEHLRRIAEQALTDPERGYGRLNVVIDPEALDHLIDVANGDARSLLNALELAVETTPPDASGRIHITLPVAEESIQRRAVLYDKEGDAHFDTISAFIKSLRGSDPDAALYWLARMIYAGEDPRFILRRMLIFAAEDVGLADPRALQVAAAAAQAFDYVGMPEGQFILAECCLYLATAPKSNATMAYFNALAYVEREQSGEVPTHLKDASRDRQGLGHGQGYKYPHAYREHYVPQQYLPEHMQGTYFYEPSDQGYERVIAERLAAWRQRDLAEGLQKRLQRYLPDDADR
>NZ_AP019797.1|WP_161540216.1|339846_341604_-|dynamin-family-protein
MEALLTAEHEALLEAERNLLARLHGVLARTGADESLRERLSEVIEALDALFVVVVVGEFNAGKSTVLNALFGEKLLEEGPIPTTAKITLLRYGETPMERPRSEYLVERYHPSERLRHLVLVDTPGTNSIIRRHQELTEHFIPRADLVLFVTSFDRPLAESERQFLSYIRDTWGKRLVFVLNKADLARSEADLEQVLAHIRTGCRELMGFEPEIFPISAARAFEARTSDDPEQRARLWESSGFEDFERLLLDRLAGPERLRIKLTAPLDVAEKLIERLQAHLAERRQLLEQDRTNLERLEARLEEVRTELIATVRPYLSEIDNQLLQVERRGLQFLQDTIRIGRLGLLRDRDRFKEEFARQVVRDLDHRLETTLAEAVDRLLQQGLQLWNQTLSEFTERVEQVVRRRTPQVRADLLYDRRQLFDAVVRQATRQLETYDLREEARRILENTRDAVALFLGTEALAGLGALVTMVITAAGLDVTGGFVAAGALAVVGLVVLPIQKRRALREFRDRIEQLRTELLAALEQQLEREVDGLLERLAATLAPYREFVHHEQHLVEETGEALQALERETRRLRAAIEKAVPVG
>NZ_AP019797.1|WP_014066018.1|339343_339850_+|preQ(1)-synthase
MTEQERQALAEKLAALREEALAHTEQALAYMARFGVRPEGRIQPFLPPEARQQHIDRLPYEHAVRQVVVYETEPGEFSAVCPFSGLPDYGVLRIEYVPGSWILELKSLKYYIVSWRNIGAAQEDLTAIIYQDLMRHLEDPEYLRVTTVYNVRGGIRTTCTIDSREQGR
>NZ_AP019797.1|WP_161540215.1|338733_339204_-|6-carboxytetrahydropterin-synthase
MKVAKRFRFEAAHRLPWHPGACRHLHGHSYRLVVGLEGDPDARGILVDFQDLKRLVQPLIDTWDHATLVASDDTALQEALDALGSRYVVLPFDSTAENLCTYVADYLIREAGDWLRARGVRRLWVRLAETETSFAETECALIRDVRPEPAAHAEAR
>NZ_AP019797.1|WP_161540214.1|338057_338774_-|7-cyano-7-deazaguanine-synthase-QueC
MSAPNLLPTLKPAEHGETALVLLSGGQDSTTCLYWALHYFPKVEAIGFHYGQKHAVELEQARKIAEQAGVPFTVLDLRGLLRGSALTEHDQDVSAAHPLAPHLPASFVPGRNALFLTLAASYGFTRGIHDLVGGMCQTDYSGYPDCRRPFIDAMERALSLALDTTIRIHTPLMHLTKAETWRLARELGILDVIIELTHTDYNGDRSERHAWGYGRLDNPASILRARGYEEAKARGWLD
>NZ_AP019797.1|WP_161540213.1|337353_338055_-|radical-SAM-protein
MRSYRIKAIWKTLQGEGFFAGRPAVFVRFVGCNLWSGYEQDRERDARRTGADCPRWCDTDFRKEGSRAYTADELVAAMQEVGGPIRFCVLTGGEPLLQLDAALMRALKAAGYFVAIETNGTISLRQACTDPETGQVVAPDWIVCSPKLPEDRLTLEYFDELKLVMPDYRPEQYARFARRARPHRAGGRRVPLLWLQPEDGPRLAEARRCAVELALAHPDWRVSVQTHKILGVP
>NZ_AP019797.1|WP_161540212.1|336132_337026_-|hypothetical-protein
MPSRWLCAIGLLGALALGPPSSHAQSLLQVVPDTLLLHDEAGCMWIGEEEACYKGRAALINRGTEPVRIDSLGMLCDDPEGIWYIYYGWGNYWVTLFKAPDYKIEGFLYGPDDCFAKCTYEDENGISQPVPGCVAFHSITLELEVQDTLWFLIRGVDMCPMCKRSGAGNVQADAIDIPDVFAFYQQVPFPDTVWLAVSWDSLSPSAVEPVEAEGLELQAYPQPFRERVHLALSARRAGLYEVVIWDVLGREQARWRYQMVPGARREWSWRAGASGVYLVGIFRDGRLLAFRTLISMR
>NZ_AP019797.1|WP_161540211.1|332443_336097_-|hypothetical-protein
MHAGKRLVFLVLLVCSLGITETLAQSGLPELSCASGSGEAVTQGVQLTGTQPSYTAARHFPVTGQVNVLFILARFRDDNYEHCAEITGYDATGYPIFEERNYQAFCANRNGDSFEVGGFQSWTDDPATEWPVATGDPSRDRQVYNAHEHELPEWAKGTRLIDPPGVTSITPGSLTDFYHRMSGGQLDVRGYVWPRVYVTEYGQDHYKADSIDSQARFFVNGAAAASYEIITYVRDHPHGIPLANSSLWDRYTNGQGDNLTPDGKFDMIVILWRFSKFDFSSRPEERDKSSITSLGSTSSSGDGFARVNNGQGLWIHDLQVIDNTTAGSGIIGAAHTHKGAIAITVHELGHRHFGLYHTIDGQSSAYQSAFSVMGGSYSVMGPGDRLKLGWVEAVMINLEDIRNQHGGRLSYELIDGTLSNQVLYLYDGSPQCGDVVVEARTWSNYWDRPPDGFNADGDWEDTYLPEGLYIEKAPSPSGSGCGYDFNGNPRFSSMENTGLAFDHRRVDKSFRWGSRSPIASVAFGPGDAYTPFSRYLRDFHRNSTLDGRLALTDITRSGNGFQFTIWGDFPAASQTRRLTTNYGFDGQTVARNTTGVWSLQGALVLQGTGAPPPIPAGTTFRLGSNAQLVVERPVEVVGTATHPVRFERLDPSQPWKELTLRADSNRFEYVVFDGGTKTVEILSRENMFRFCRFRNGWRGLSSNFYQYPANQGRSSFRLEQSIVENNQTVGVVAYHADVTLQQVTVRGNGQAGLWLYDGYGTVGSSVIEQNGTGASYRSGIEVHYNSYVQFYYTSSFVPAVNRVARNAHHEVYLASSADGAWLGYCSSGPMGSFHLGDYNAIFDDGPQAGDERLIYNGTSTNVVARCNYWAGAGADKFYGTVDRAYPLSYDPTGSSGAYEGGVPARVASDAPPEVATAGLNASVAASPGMSVSAAVAEEDAAQALRAQMRALRARLLAAPEAPEADRWLRELYALEQADRWDRLGERAANRQVRTWLAGRLLAGERLSATGRRAGEVALLLELRALLAAGQYAEAAARLKFYDRWIREPAHRQELRWARLVLLEQAGRLAEAQAELAALQAEASEAERATWSVLTEALGAKAAAEEATAKRLEAAPEVTAAEVAAKPEALTLSVYPHPVRDRGTLVLGLPEAARVRVVVYDVLGREVGVLLEGWQSAGWHRVVLDGRHWRSGWYMVRAEVVWPDGRVEARTQPLLRVR
>NZ_AP019797.1|WP_161540220.1|346853_347852_+|transposase
MNASKVDELDYIHFLVAAQRVFTTTEAARIRAGELNAPAHDAYTRLLKRIPPDTEALWQEVAPFVRPDRGVLVVDDTTLDKPHARKMAWVTRHWSGKHKRVVQGINLISLLWTEGQARLPCDFRLYNRAEDGLTKNDHFRALLQTAHARGFQPRLVVFDSWYASLANLKYVRQLGWEWFTRLKANRLVSVEGERRNRPVSSWPIPAEGCVMHLKGYGWVKVFKTVTPDGREEYRASSRLDMTLEETAAYGRHAWQIEVYHQGLKQFTGIERGQFRVAEAQRNHIGLAIRAFLRLEVARLQRGISWFEAKQAILREAIRHYLASPSLILHSTA
>NZ_AP019797.1|WP_161540221.1|350829_351666_-|DUF2726-domain-containing-protein
MATSSTPADVETLYRHVQAQAWTPALELVYRHRTLLAVDPLWRHAADVLVRELHPRLAEVGEAVLERLFLLHTGRLYALPETVFADLVAELVRRHADRPELARRYARWCPTHPECARLLATPTTETPWEELNGFAVRRHQPIQQVRSPSLFRSQQEFVFFQAVREVFPTYLVYPNVALSCLIDYERLADVLSEAERRYALQALVDCAVFDPDDGYRPRYCFELDSPLHGAPERRQRDALKARILQQAGLPLFCIRPPTGTVDRDAFVALLRRLFQQNL
>NZ_AP019797.1|WP_161540222.1|351729_354132_+|prolyl-oligopeptidase-family-serine-peptidase
MKRLTAGWILLLMLGGVAWAQPQLTVEKIMQDPKTWIGDWPDNPFWSEDGQYLYFWWNPKGQFPSDSLYRVSRSGGAPEKVTPEERRNLPPAFDGWHHGEWVYDADFRRKVFARDGDLYLYDRTTRRLTRLTRTAECESNPRFTPDGQAVVFVKENNLFQLDLRTGALTQLTDLRRGQEPRERRPDAQDAFLEAQQRALFEVIRKRVEMREAREKAQERDRKAENPPPTFYYGDKNVEQLQLDPTGRFVTFALTTDEPREKATAVMDYVTESGYARELQARPKVGVPPGSFELYVQDLMRDTTYRVNLHQVPGAYDVPEYLREQGVEPDSQKTKRFLYAYGPYWSGDGRYAVLEVRARDNKDRWIVRLDPETGRLTVLDRQHDEAWIAGPGISWFGGRSTMGWLPDNRHFYFQSERTGYSHLYVVDAETGRIRQLTDGEFEVFEPFVSRDGRYWYFISSEGSPFERHFYRMPIDGGSRERLTTLTGRNDVVLSPDEQVMGILYSYSNRPPEIYLQPLRRGRPGEPQRITHSPTEEWLAYPWRDPEIRFIPASDGAQVPARVYEPDSLNGAAVFFVHGAGYLQNVHRWWSSYFREYMFHNLLADRGYLVLDLDYRGSAGYGRDWRTAIYRHMGGRDLQDYVDAARYVQERYGIPPERVFIYGGSYGGFLTLMALFTEGEHFGGGAALRAVTDWAHYNHPYTSNILNTPETDSIAYVRSSPIYHAEGLEDPLLMCHGLVDTNVQPQDIFRLVQRLIELGKENWELAVYPVEGHGFQEPSSWTDEYRRILKLIETTVGPGRRR
>NZ_AP019797.1|WP_161540223.1|354204_357348_-|carboxypeptidase-regulatory-like-domain-containing-protein
MRRISLILLCLLGLPLAGYAQGVTTAALTGTVTDERGDPLPGANVVAVHEPTGTQYGTTTQIDGRYALLNLLPGGPYTVTVSFVGYQTRRETDLMLPLGQTRVLDFTLAEATVELQALEVVGVRSSVLNSDRTGARTNIDEATIERVPTITRSLADFTRLTPQATGGFSLAGRNNRYNNIQIDGATLNDVFGLSGTGMPGGQADAQPISLDAIQEFNIDIAPFDVRYNGFTGGSINAVTKSGTNRLSGSVRYLGRNQNFVGDLKTPDGETVPFGDFSEYTLVGNLGGPIQPNRAFFFVNAEYQRRKTPLDVGVQGSRAATIFPVALDSLNRIIEIARTRYGYDPGGFDPLSNGTDNFKLLAKIDWNLAPNHRLTLRHNYVNADKDEGISRGTFSFDLSNRRWIFESVQNSTVLELKSTFGTNLFNEARLVYTRIRDKRTVKAQPFPQVSILVNNRYTVNLGIDRFSQANALDQDLWEFTDNLTYFRGKHTITVGTSNQIYRFSNLFIQDYYGAYEFNSIADFEAGRPSRYFFSYSLLDDPKPRAEFTAYQLGFYVQDQYQATPHLSVTVGLRVDVPLYPDKPLYNPAVPEAFPGYSTATTASGNLLWSPRLGFNWDLSKGARTTQLRGGTGIFSGRTPFVWISNQYSNTGVDFGRVDARNLPEGCFVPEPDPAAQPRPGTALGTTCGLAPITTTEVNLIDEDFKFPQVWRTDLALDQQLPYGLIGTIEFLYSKTINDVVFENLNIVRTGTAQGGRVLYGTPSFNGSTARKDPRFTNAILLKNTDKGYSTSLTVGVQREAQAEGLSGALFYTWNRAENVNNATSSRAISNWQYNEARDVNNPELGTADFEVRHRILAHLSYRVRYQQRFATTVTLIYEGRSGSPFTWIYNGNANADTRRDNDPIYVPASPDEIVFTSDSPGGWDELNAFIESEPSLRKYRGQIVPRNSARAPWRNLLDLQLIQEIQTLGTQRLEITATLLNVLNLLNSDWGKVRYTLFDTVRLMDFLGYDDQGRAIVRFTPVQDRDDLFITDDLASRWQLQLGVRYVF
>NZ_AP019797.1|WP_161540224.1|357643_359818_+|hypothetical-protein
MWLGWWSAGTLAQGFEEAVVNIGNVGLTITNAGFVGKANVRNNPAGPPSFEYPLDSGVEHLFEAGLWIGAIRSDGLITVRTGAITSSGGYRPGAAGYELAPLEPIIERSTLPTSPVFTRAAVSHQDFVTAYTDTARFLPGTLIPMPDPAGQLGAKIIQTSYAWNFLFTESFVIINFDIINISDQPWDSVYVGLYHDLVVRNVNTTQDQGSAFFNKNGVGFIDSLQATYAFNAGGTEESINTYGAIAFLGAEWRDPRTGQYRFFHPNVADEYIRDGYTPPIVNPRWWLFSGGTDERSRPGDDRTRYQRMGTPYPNPADYPGCRGVQDLACQDSSYVQAVRAWREELRTAGQRSQGNWIGLTPVGPFRRVLPGDTLRVTFAFVGALKPEAYQGLAGRPIDNAESRSLLRTNLFWARRTYAGEDLNYNGRLDPGEDVNGNGRLDRYLIPEPPPPPRVRVEFTTDTDPQTGRTRTGVVLYWDRSAESAIDPVTGRRDFEGYRIYRTNPGDDRFGNLLDRAVLIAQYDRPGNRTGFNNGFEAIRLPEPVTFSDDTTRYWYRFEMSDLKAGWQYLFIVTAFDEGDPDTGLEPLESSRTAGAVRVFPGTTPTRRGPVGVYPNPYRAGAAWDGGTSRTRKLYFYNLPPRCEIRIYTLAGEIVKTLYHDAATYTGDIRWFNDFSGPGRRLSGGEHAWDLLSENGLDLASGLYLFTVKDLDTGEVQRGKFVIIK
>NZ_AP019797.1|WP_161540225.1|359845_362044_+|T9SS-type-A-sorting-domain-containing-protein
MRRIATTMLLLLGIGLLLPARAQIKDVTVREINQIHPDSLALLKQLGTSLTTDRIESLIQSPLTGDTVRFTAVVMSDPRKSGLASTNQDGVPSRLHVFVRDTSAVSQGKDGMTIQIVDGAYETTGLKNLTKGDVATFTAVVDYYFNTIQLVPISIELLGDYKSLGLPDSLLDPVVVTTADLNVNVDVGKVQVNWDNFARLNNQYVRIENATMLRSTLADQGRPNWLFSSDGGETFVQADDISLRFRNDRAGYPDEYNKRAPNDPFRPPPPGALINVQGFVVFRGYFEAFDLGAIPPGAMLRLAPFEDTDLEVLEAPPTISDVGRPDFVPGNEPVTITFDVAADPNRQLTSVELHYYTSSQPDTQVVQASPAASKAGARGTLALYEAQIPAAPDGDFVTYWVEAEDNTGARTRSDDQYYRVLYGGITQIAHVQETPNGGPGDSPFAGVTTDMDLHVVVQSQPSVSGLVAVQDDANLGPWSGILLNLPSAARDTIQRGDRLHITRAYIQENQGVTELDSLTFTKEGTGDFLGYKTMTTNDLVDPSIAEAHEGMLVRFENVTIINPDEGYGEWSFSSDGTEENKVKADDRSSAISSDFAVNTFQAGDLVEFIQGIWWYSFGEYKLVPEDPNTDIGPITTDVEPGENLPAAFTLAPNYPNPFAEVTTLRYALPQAGPVRLEVFDLLGRRVAVVVDGVQPAGVHEVKLDGRGLSNGLYVVRLTTEAGTATRMIVRMK
>NZ_AP019797.1|WP_161540226.1|362114_363731_+|hypothetical-protein
MTYSLRALPGLIALIVLLGGCDAGFTGEPLPNQPPETYLSVRDSSLVDNLSDEERLVSTVYVSWTGDDPDGYVAAYEFRYYDATTGPADVFWTRTIRNDSLVLLPIPPGSATANVVFEVRAIDNEGLADPTPARTVFPIRNSPPEIRLVSFELPPDTTFPIFSFSWQAEDPDGAVNLARIEVSFNDSTQFVALPPDVDFVTFVANFDRDDPTQTEVTARVYTGRAFRSTTIEVPGLRLDAENTFYVRAVDQADTSSALARHTWFVKKPRSRVLLVNDYRKATGSVVMAYHRAILRDFLPPGMPIDEWDISRPYVTGSAGNTPRSDALPPVPDPTLRQTLALWDYIYWVSTATVNSVVGNNLPYAAAVMDLFFERGGRILVHSPVTQPRDPEANLGNPAILMLPLSDLLVLPDSVRRLELPSGAAITPVSAPPGVAEALPPLQSNRFFINELPYFAEGATIIPLYEADYRYLSRSGRRGTWPYPRTVASISADARVALFGLPLVNELSGEPELVGADGDPEAGRRAVMLLLRSLGFPER
>NZ_AP019797.1|WP_161540227.1|363727_366643_+|TonB-dependent-receptor
MNRRTAGRNAILWLLLTLVGALPARGQGSIAGTVRDERGEPLPGVNVVVVGTSYGAATDLDGRFRIDGLRPGEYSVRVSYVGFETVLFTGVRVRDGETTTLDVTLREQVVVGEEVVVVGERPLVDVEQSSSAYIVSREQIEAAPLRSVQEVVGQQAGVLRDPTGLYIRGGRAYETGYYVDGVSARDPLAGTGFGLDLGTNAFQEVEVITGGLDARYGDVTSGVVSIQTREGGERLSGSFTHKRDNFGSLNESWGSNFHEDLYELTLGGPLGTDRLRFFVAGQVQLSDGFTRHVSDPDSVRSSLVKWDFLLPRTGNRWNGFLKLTYTPWPGLKLQAAYQRSLTVNQNTRMLQVTGNEAVVAPGFQYAFILQPENANTFAHDNVLAYVKASHVINERSFYEIQISRLFTRLRADANGRRWRPRAVTTELDPRSIVTYPATIFVDENGQPFDPNALFVLPGPGLYNNGGIATRFHDHFAEEWTLLGTYTLFSTDRNRRLNAGLELKFNDYQWIDIIRPWVGAPIGSEAAEATGRLGESADIWRVKPRRGALFTTGQVRYRGLILNAGLRLEWWSPGRYVDRLVDDPRAPILETVRRAYKDDTVPFFGLRTKFFLLPRLRVSFPIRENQVLFFNYGRATRLPHPTFVYAGLDPFYQDRSFFADLGNPNLNPEVDISYELGLRYQVTSNDVLSVTAFWRDKFDFITIENVIIRDPTGRETVRAFRINGDFARVRGLEVSYLKRIGDWFLGQMAGSFSRATGLSSTNNDALVQFLARGDIENTFETPLAWDRPIDLKASVTLTYDRPRPLLGLPGLNRLQLFLSTTFRSGQRYTPAEFKGYQTNPFTGEANWRPIYEIVSDPAARYSRIGAPWWWFDLALRRRIRLAGNDLELSVEITNLFNQKNSVIVNPVTGKAYPDVDPEKTDFTKLRGNRDFDVPINVRDPRYEDPTTTGLPPFNPARFLPPRHVMFGISYAF
>NZ_AP019797.1|WP_161540228.1|366647_367712_+|PorV/PorQ-family-protein
MTRICLLLALLLGAFGEARAQLLPSYGRDRAGTSGFQFLKIPVDARSAALGETVVAEAFDASALFWNPALAAQIENVQVGVGHTAYFVDIRLDYLSLIYPLRWGGLTLGLSLEALDSGEMPVTTEFEPYGTGEMFSFRDLALGLSVAQPLTDLFSYGITARYVRESVAELVTQTLLFDLGIFYRVGDTGVQMAVAIRHFGFDGRPEGKLARTVIAQTGPAKRAADPEPIATTPDPSVRIETEFETITPPTTFLLGVSYTLLRDNPQHRLTLLGQLTNPNDNAETFNVGAEYTWNHTLMVRMGYRFGVEEFRTPALGVGLRLPELVAGVQARFDYGFQHLERLGTVHRVGLNLEL
>NZ_AP019797.1|WP_161540229.1|367714_368986_+|hypothetical-protein
MSRFRSVARRWTKTWGALLVLGLLLAGCDALLGTKQDPTTEEIFRVGRTEPGLLREVEYVPLFPFYTLGGDGAPLEAPKDVYVGFDTFIYVVDARGLHVLDQAGRPAVFIPIPGGATSVIQDRRLHVYVTARRDTTIGGRTWNLPVVLHYAGIPTGNPRLVDILWHPFDDRSRRLNRPDPIPTDEQVEFTGVAVLADNSIYVARRGPVNDPASVILPHNTILEFTPDGINTQALVTLDPRQPSLRSAINPSDVLTFVHPPQRTTFPFLRDFYIAQTPPEGERLRYAVLSIRAVETPDGIEYRPDADKIQIVGDTTRGDGFLYEDFKFGCPSDLAFAADGTNYLFVLDACKDSLFVFTSAGVEGVAPPPGAASTKPVVVSFGGRGDGSRQFNNPQGVAYDRRIVYVADTGNNRIARFRLNTDFE

Crispr_ID: NZ_AP019797_3

• CRISPR_ID: NZ_AP019797_3
• CRISPR_location: 550990-553275
• CRISPR_type: TypeI-E
• Repeat_type: NA
• Spacer_info: 37 spacers
• Cas_protein_info: cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh

Consensus repeat of NZ_AP019797_3

Consensus_repeat	Method
GGTGTCCCCGCACCCGCGGGGATAGTCC	PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCC	CRT

spacers of NZ_AP019797_3

>3.1|551018|33|NZ_AP019797|PILER-CR,CRT
CCGCCTTCCTCCACCCCGTTGACGAGCGCCTCG
>3.2|551079|33|NZ_AP019797|PILER-CR,CRT
TTCGGTTCGGCTATCACTTCAGCTGACAAGCGG
>3.3|551140|33|NZ_AP019797|PILER-CR,CRT
CTCCCGGTAACCGCCGCGATAGTAACGCTTCCT
>3.4|551201|33|NZ_AP019797|PILER-CR,CRT
CGTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTT
>3.5|551262|33|NZ_AP019797|PILER-CR,CRT
CTGCTCGGCCGGATGCGGAACGACAACGGGCGG
>3.6|551323|33|NZ_AP019797|PILER-CR,CRT
CTTCTCACTTGTGATCACCGACGTTTTGCCGGG
>3.7|551384|33|NZ_AP019797|PILER-CR,CRT
TATCCCCGCTGTCGGCGCGCAATTCATCTGAGT
>3.8|551445|33|NZ_AP019797|PILER-CR,CRT
CTGCGCCGCCGGTGGTCGATCGGAGACGGCCAG
>3.9|551506|33|NZ_AP019797|PILER-CR,CRT
CTCATCTTTCACGGCCGGTTGCGGATCGGCCGG
>3.10|551567|33|NZ_AP019797|PILER-CR,CRT
CGGCACGGAGATCACGCAGACGTCCACCAAGCT
>3.11|551628|33|NZ_AP019797|PILER-CR,CRT
CAAAGCCACTGGCTCGCTCTGGGTGACGATCCA
>3.12|551689|33|NZ_AP019797|PILER-CR,CRT
CTTAGTCCGAATCTAAATAACCGTTGCGGAAAT
>3.13|551750|33|NZ_AP019797|PILER-CR,CRT
CTTGTCGAGCGGATCGGTCTCAACGTAGGTGGC
>3.14|551811|33|NZ_AP019797|PILER-CR,CRT
CCGCCGTCTCACCGGCGACGATGCGCCGGGCCG
>3.15|551872|33|NZ_AP019797|PILER-CR,CRT
CCGGCGGCGCGGGTGATCCACTGCTCCCCCGGA
>3.16|551933|33|NZ_AP019797|PILER-CR,CRT
CTTGAGTTTCACCGCCGACTCTTTCCGTTCGGC
>3.17|551994|33|NZ_AP019797|PILER-CR,CRT
CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
>3.18|552055|33|NZ_AP019797|PILER-CR,CRT
CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
>3.19|552116|33|NZ_AP019797|PILER-CR,CRT
TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
>3.20|552177|33|NZ_AP019797|PILER-CR,CRT
CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
>3.21|552238|33|NZ_AP019797|PILER-CR,CRT
CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
>3.22|552299|33|NZ_AP019797|PILER-CR,CRT
TCTCACCAGCACAAGGAGTGATGCCGTCTGAAA
>3.23|552360|33|NZ_AP019797|PILER-CR,CRT
TTTTTGCGGGTGACGGCACCGCCTACGATATTG
>3.24|552421|33|NZ_AP019797|PILER-CR,CRT
TTCACAAAATCTTTACACGTCCGTGCGGGTCCC
>3.25|552482|33|NZ_AP019797|PILER-CR,CRT
CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
>3.26|552543|33|NZ_AP019797|PILER-CR,CRT
CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
>3.27|552604|33|NZ_AP019797|PILER-CR,CRT
TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
>3.28|552665|33|NZ_AP019797|PILER-CR,CRT
CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
>3.29|552726|33|NZ_AP019797|PILER-CR,CRT
CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
>3.30|552787|33|NZ_AP019797|PILER-CR,CRT
CCTGACCGTGCCCCTGGACCGAGAGGACTACGA
>3.31|552848|33|NZ_AP019797|PILER-CR,CRT
CCGATCTGGCTCCGGCGCCCGAGCGGCTTCAAG
>3.32|552909|33|NZ_AP019797|PILER-CR,CRT
CTTCCCGCGCTTCCTACCACAGGCTTCGTCACG
>3.33|552970|33|NZ_AP019797|PILER-CR,CRT
TCAGAGCCATCTTCGCCTACTGTTTTGTTGGTG
>3.34|553031|33|NZ_AP019797|PILER-CR,CRT
CAAGCAGGCTGTTTACAGGCAATACTTGAAGGC
>3.35|553092|33|NZ_AP019797|PILER-CR,CRT
TCATTCAGGATATCATAAAATCCACCTATGACT
>3.36|553153|33|NZ_AP019797|PILER-CR,CRT
TTACCTTCAATCGGCACCCTTCTTTTGGACGCC
>3.37|553214|33|NZ_AP019797|PILER-CR,CRT
CTTTCTGGAGCACGACGAGCTGCTCGGCGAGCG
>3.38|551019|32|NZ_AP019797|CRISPRCasFinder
CGCCTTCCTCCACCCCGTTGACGAGCGCCTCG
>3.39|551080|32|NZ_AP019797|CRISPRCasFinder
TCGGTTCGGCTATCACTTCAGCTGACAAGCGG
>3.40|551141|32|NZ_AP019797|CRISPRCasFinder
TCCCGGTAACCGCCGCGATAGTAACGCTTCCT
>3.41|551202|32|NZ_AP019797|CRISPRCasFinder
GTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTT
>3.42|551263|32|NZ_AP019797|CRISPRCasFinder
TGCTCGGCCGGATGCGGAACGACAACGGGCGG
>3.43|551324|32|NZ_AP019797|CRISPRCasFinder
TTCTCACTTGTGATCACCGACGTTTTGCCGGG
>3.44|551385|32|NZ_AP019797|CRISPRCasFinder
ATCCCCGCTGTCGGCGCGCAATTCATCTGAGT
>3.45|551446|32|NZ_AP019797|CRISPRCasFinder
TGCGCCGCCGGTGGTCGATCGGAGACGGCCAG
>3.46|551507|32|NZ_AP019797|CRISPRCasFinder
TCATCTTTCACGGCCGGTTGCGGATCGGCCGG
>3.47|551568|32|NZ_AP019797|CRISPRCasFinder
GGCACGGAGATCACGCAGACGTCCACCAAGCT
>3.48|551629|32|NZ_AP019797|CRISPRCasFinder
AAAGCCACTGGCTCGCTCTGGGTGACGATCCA
>3.49|551690|32|NZ_AP019797|CRISPRCasFinder
TTAGTCCGAATCTAAATAACCGTTGCGGAAAT
>3.50|551751|32|NZ_AP019797|CRISPRCasFinder
TTGTCGAGCGGATCGGTCTCAACGTAGGTGGC
>3.51|551812|32|NZ_AP019797|CRISPRCasFinder
CGCCGTCTCACCGGCGACGATGCGCCGGGCCG
>3.52|551873|32|NZ_AP019797|CRISPRCasFinder
CGGCGGCGCGGGTGATCCACTGCTCCCCCGGA
>3.53|551934|32|NZ_AP019797|CRISPRCasFinder
TTGAGTTTCACCGCCGACTCTTTCCGTTCGGC
>3.54|551995|32|NZ_AP019797|CRISPRCasFinder
AACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
>3.55|552056|32|NZ_AP019797|CRISPRCasFinder
CAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
>3.56|552117|32|NZ_AP019797|CRISPRCasFinder
TGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
>3.57|552178|32|NZ_AP019797|CRISPRCasFinder
AAACGGTGGCAAGAGTATTGCACCGGAGAGGA
>3.58|552239|32|NZ_AP019797|CRISPRCasFinder
AAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
>3.59|552300|32|NZ_AP019797|CRISPRCasFinder
CTCACCAGCACAAGGAGTGATGCCGTCTGAAA
>3.60|552361|32|NZ_AP019797|CRISPRCasFinder
TTTTGCGGGTGACGGCACCGCCTACGATATTG
>3.61|552422|32|NZ_AP019797|CRISPRCasFinder
TCACAAAATCTTTACACGTCCGTGCGGGTCCC
>3.62|552483|32|NZ_AP019797|CRISPRCasFinder
AACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
>3.63|552544|32|NZ_AP019797|CRISPRCasFinder
CAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
>3.64|552605|32|NZ_AP019797|CRISPRCasFinder
TGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
>3.65|552666|32|NZ_AP019797|CRISPRCasFinder
AAACGGTGGCAAGAGTATTGCACCGGAGAGGA
>3.66|552727|32|NZ_AP019797|CRISPRCasFinder
AAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
>3.67|552788|32|NZ_AP019797|CRISPRCasFinder
CTGACCGTGCCCCTGGACCGAGAGGACTACGA
>3.68|552849|32|NZ_AP019797|CRISPRCasFinder
CGATCTGGCTCCGGCGCCCGAGCGGCTTCAAG
>3.69|552910|32|NZ_AP019797|CRISPRCasFinder
TTCCCGCGCTTCCTACCACAGGCTTCGTCACG
>3.70|552971|32|NZ_AP019797|CRISPRCasFinder
CAGAGCCATCTTCGCCTACTGTTTTGTTGGTG
>3.71|553032|32|NZ_AP019797|CRISPRCasFinder
AAGCAGGCTGTTTACAGGCAATACTTGAAGGC
>3.72|553093|32|NZ_AP019797|CRISPRCasFinder
CATTCAGGATATCATAAAATCCACCTATGACT
>3.73|553154|32|NZ_AP019797|CRISPRCasFinder
TACCTTCAATCGGCACCCTTCTTTTGGACGCC
>3.74|553215|32|NZ_AP019797|CRISPRCasFinder
TTTCTGGAGCACGACGAGCTGCTCGGCGAGCG

CRISPR arrays and Neighbor proteins around NZ_AP019797_3

CRISPR arrays

The CRISPR arrays of NZ_AP019797_3

>merge|NZ_AP019797|3|550990-553275|PILER-CR,CRISPRCasFinder,CRT
GGTGTCCCCGCACCCGCGGGGATAGTCCCCGCCTTCCTCCACCCCGTTGACGAGCGCCTCGGGTGTCCCCGCACCCGCGGGGATAGTCCTTCGGTTCGGCTATCACTTCAGCTGACAAGCGGGGTGTCCCCGCACCCGCGGGGATAGTCCCTCCCGGTAACCGCCGCGATAGTAACGCTTCCTGGTGTCCCCGCACCCGCGGGGATAGTCCCGTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTTGGTGTCCCCGCACCCGCGGGGATAGTCCCTGCTCGGCCGGATGCGGAACGACAACGGGCGGGGTGTCCCCGCACCCGCGGGGATAGTCCCTTCTCACTTGTGATCACCGACGTTTTGCCGGGGGTGTCCCCGCACCCGCGGGGATAGTCCTATCCCCGCTGTCGGCGCGCAATTCATCTGAGTGGTGTCCCCGCACCCGCGGGGATAGTCCCTGCGCCGCCGGTGGTCGATCGGAGACGGCCAGGGTGTCCCCGCACCCGCGGGGATAGTCCCTCATCTTTCACGGCCGGTTGCGGATCGGCCGGGGTGTCCCCGCACCCGCGGGGATAGTCCCGGCACGGAGATCACGCAGACGTCCACCAAGCTGGTGTCCCCGCACCCGCGGGGATAGTCCCAAAGCCACTGGCTCGCTCTGGGTGACGATCCAGGTGTCCCCGCACCCGCGGGGATAGTCCCTTAGTCCGAATCTAAATAACCGTTGCGGAAATGGTGTCCCCGCACCCGCGGGGATAGTCCCTTGTCGAGCGGATCGGTCTCAACGTAGGTGGCGGTGTCCCCGCACCCGCGGGGATAGTCCCCGCCGTCTCACCGGCGACGATGCGCCGGGCCGGGTGTCCCCGCACCCGCGGGGATAGTCCCCGGCGGCGCGGGTGATCCACTGCTCCCCCGGAGGTGTCCCCGCACCCGCGGGGATAGTCCCTTGAGTTTCACCGCCGACTCTTTCCGTTCGGCGGTGTCCCCGCACCCGCGGGGATAGTCCCAACCCGGCCGCGTCACTCGGAAGGGCGCGGAAGGTGTCCCCGCACCCGCGGGGATAGTCCCCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGCGGTGTCCCCGCACCCGCGGGGATAGTCCTTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCAAACGGTGGCAAGAGTATTGCACCGGAGAGGAGGTGTCCCCGCACCCGCGGGGATAGTCCCAAAACGGAGGCGGAACCGTGAAGGTCGTAGCAGGTGTCCCCGCACCCGCGGGGATAGTCCTCTCACCAGCACAAGGAGTGATGCCGTCTGAAAGGTGTCCCCGCACCCGCGGGGATAGTCCTTTTTGCGGGTGACGGCACCGCCTACGATATTGGGTGTCCCCGCACCCGCGGGGATAGTCCTTCACAAAATCTTTACACGTCCGTGCGGGTCCCGGTGTCCCCGCACCCGCGGGGATAGTCCCAACCCGGCCGCGTCACTCGGAAGGGCGCGGAAGGTGTCCCCGCACCCGCGGGGATAGTCCCCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGCGGTGTCCCCGCACCCGCGGGGATAGTCCTTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCAAACGGTGGCAAGAGTATTGCACCGGAGAGGAGGTGTCCCCGCACCCGCGGGGATAGTCCCAAAACGGAGGCGGAACCGTGAAGGTCGTAGCAGGTGTCCCCGCACCCGCGGGGATAGTCCCCTGACCGTGCCCCTGGACCGAGAGGACTACGAGGTGTCCCCGCACCCGCGGGGATAGTCCCCGATCTGGCTCCGGCGCCCGAGCGGCTTCAAGGGTGTCCCCGCACCCGCGGGGATAGTCCCTTCCCGCGCTTCCTACCACAGGCTTCGTCACGGGTGTCCCCGCACCCGCGGGGATAGTCCTCAGAGCCATCTTCGCCTACTGTTTTGTTGGTGGGTGTCCCCGCACCCGCGGGGATAGTCCCAAGCAGGCTGTTTACAGGCAATACTTGAAGGCGGTGTCCCCGCACCCGCGGGGATAGTCCTCATTCAGGATATCATAAAATCCACCTATGACTGGTGTCCCCGCACCCGCGGGGATAGTCCTTACCTTCAATCGGCACCCTTCTTTTGGACGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCTTTCTGGAGCACGACGAGCTGCTCGGCGAGCGGGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019797|3|1|550990-553274|PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGCCTTCCTCCACCCCGTTGACGAGCGCCTCG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCGGTTCGGCTATCACTTCAGCTGACAAGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTCCCGGTAACCGCCGCGATAGTAACGCTTCCT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTCGGCCGGATGCGGAACGACAACGGGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCTCACTTGTGATCACCGACGTTTTGCCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TATCCCCGCTGTCGGCGCGCAATTCATCTGAGT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCGCCGCCGGTGGTCGATCGGAGACGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTCATCTTTCACGGCCGGTTGCGGATCGGCCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGCACGGAGATCACGCAGACGTCCACCAAGCT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAGCCACTGGCTCGCTCTGGGTGACGATCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTAGTCCGAATCTAAATAACCGTTGCGGAAAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGTCGAGCGGATCGGTCTCAACGTAGGTGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGCCGTCTCACCGGCGACGATGCGCCGGGCCG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGGCGGCGCGGGTGATCCACTGCTCCCCCGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGAGTTTCACCGCCGACTCTTTCCGTTCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTCACCAGCACAAGGAGTGATGCCGTCTGAAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTTTTGCGGGTGACGGCACCGCCTACGATATTG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCACAAAATCTTTACACGTCCGTGCGGGTCCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTGACCGTGCCCCTGGACCGAGAGGACTACGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGATCTGGCTCCGGCGCCCGAGCGGCTTCAAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCCCGCGCTTCCTACCACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCAGAGCCATCTTCGCCTACTGTTTTGTTGGTG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAGCAGGCTGTTTACAGGCAATACTTGAAGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCATTCAGGATATCATAAAATCCACCTATGACT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTACCTTCAATCGGCACCCTTCTTTTGGACGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTTCTGGAGCACGACGAGCTGCTCGGCGAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCC

>NZ_AP019797|3|3|550990-553275|CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGCCTTCCTCCACCCCGTTGACGAGCGCCTCG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCGGTTCGGCTATCACTTCAGCTGACAAGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TCCCGGTAACCGCCGCGATAGTAACGCTTCCT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TGCTCGGCCGGATGCGGAACGACAACGGGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTCTCACTTGTGATCACCGACGTTTTGCCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	ATCCCCGCTGTCGGCGCGCAATTCATCTGAGT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TGCGCCGCCGGTGGTCGATCGGAGACGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TCATCTTTCACGGCCGGTTGCGGATCGGCCGG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GGCACGGAGATCACGCAGACGTCCACCAAGCT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAAGCCACTGGCTCGCTCTGGGTGACGATCCA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTAGTCCGAATCTAAATAACCGTTGCGGAAAT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTGTCGAGCGGATCGGTCTCAACGTAGGTGGC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGCCGTCTCACCGGCGACGATGCGCCGGGCCG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGGCGGCGCGGGTGATCCACTGCTCCCCCGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTGAGTTTCACCGCCGACTCTTTCCGTTCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CTCACCAGCACAAGGAGTGATGCCGTCTGAAA
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TTTTGCGGGTGACGGCACCGCCTACGATATTG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCACAAAATCTTTACACGTCCGTGCGGGTCCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTGACCGTGCCCCTGGACCGAGAGGACTACGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGATCTGGCTCCGGCGCCCGAGCGGCTTCAAG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTCCCGCGCTTCCTACCACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CAGAGCCATCTTCGCCTACTGTTTTGTTGGTG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AAGCAGGCTGTTTACAGGCAATACTTGAAGGC
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CATTCAGGATATCATAAAATCCACCTATGACT
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TACCTTCAATCGGCACCCTTCTTTTGGACGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTTCTGGAGCACGACGAGCTGCTCGGCGAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019797|3|1|550990-553274|CRT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGCCTTCCTCCACCCCGTTGACGAGCGCCTCG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCGGTTCGGCTATCACTTCAGCTGACAAGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTCCCGGTAACCGCCGCGATAGTAACGCTTCCT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTGAGCCGCCAGGGCGAAGTGCCCTGGCGCTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTCGGCCGGATGCGGAACGACAACGGGCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCTCACTTGTGATCACCGACGTTTTGCCGGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TATCCCCGCTGTCGGCGCGCAATTCATCTGAGT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCGCCGCCGGTGGTCGATCGGAGACGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTCATCTTTCACGGCCGGTTGCGGATCGGCCGG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGCACGGAGATCACGCAGACGTCCACCAAGCT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAGCCACTGGCTCGCTCTGGGTGACGATCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTAGTCCGAATCTAAATAACCGTTGCGGAAAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGTCGAGCGGATCGGTCTCAACGTAGGTGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGCCGTCTCACCGGCGACGATGCGCCGGGCCG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGGCGGCGCGGGTGATCCACTGCTCCCCCGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGAGTTTCACCGCCGACTCTTTCCGTTCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTCACCAGCACAAGGAGTGATGCCGTCTGAAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTTTTGCGGGTGACGGCACCGCCTACGATATTG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCACAAAATCTTTACACGTCCGTGCGGGTCCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACCCGGCCGCGTCACTCGGAAGGGCGCGGAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAGTGCTTTCCGCCGGAAGTGTTGGGGCGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTGTGATGTTGTTCCGCCCAAGCCGCTGCAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAACGGTGGCAAGAGTATTGCACCGGAGAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAAACGGAGGCGGAACCGTGAAGGTCGTAGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTGACCGTGCCCCTGGACCGAGAGGACTACGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCGATCTGGCTCCGGCGCCCGAGCGGCTTCAAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTCCCGCGCTTCCTACCACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCAGAGCCATCTTCGCCTACTGTTTTGTTGGTG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAAGCAGGCTGTTTACAGGCAATACTTGAAGGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCATTCAGGATATCATAAAATCCACCTATGACT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTACCTTCAATCGGCACCCTTCTTTTGGACGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTTCTGGAGCACGACGAGCTGCTCGGCGAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161540352.1|546223_546763_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	gnl|CDD|187862
NZ_AP019797.1|WP_161540349.1|538779_540705_+|glycoside-hydrolase-family-127-protein	unknown	unknown	gnl|CDD|369609
NZ_AP019797.1|WP_161540350.1|541341_543972_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl|CDD|182031
NZ_AP019797.1|WP_161540353.1|549644_550538_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl|CDD|187850
NZ_AP019797.1|WP_012842999.1|548829_549627_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl|CDD|215025
NZ_AP019797.1|WP_161540354.1|550509_550938_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl|CDD|378244
NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein	unknown	unknown	gnl|CDD|225043
NZ_AP019797.1|WP_161540361.1|562422_562836_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_012842997.1|546810_548082_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl|CDD|378153
NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369777
NZ_AP019797.1|WP_161540356.1|554002_556435_-|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319849
NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase	unknown	unknown	gnl|CDD|273649
NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273386
NZ_AP019797.1|WP_161540351.1|544667_546227_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000028_cas8e_CAS-I-E	gnl|CDD|274192
NZ_AP019797.1|WP_012842998.1|548081_548840_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl|CDD|273842
NZ_AP019797.1|WP_161540355.1|553320_553998_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator	unknown	unknown	gnl|CDD|223424
NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_AP019797.1|WP_161542349.1|540818_541322_+|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl|CDD|176648

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161540352.1|546223_546763_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0196_cse2gr11_CAS-I-E	4.8e-36	118.7	2.7
NZ_AP019797.1|WP_161540350.1|541341_543972_+|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	5.4e-52	171.7	0.0
NZ_AP019797.1|WP_161540353.1|549644_550538_+|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	1.1e-83	275.1	0.0
NZ_AP019797.1|WP_161540351.1|544667_546227_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000028_cas8e_CAS-I-E	1.9e-167	552.6	0.7
NZ_AP019797.1|WP_012842998.1|548081_548840_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	1.8e-45	149.7	0.1
NZ_AP019797.1|WP_012842999.1|548829_549627_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	3.4e-28	93.8	0.2
NZ_AP019797.1|WP_161540354.1|550509_550938_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	4.5e-24	79.2	0.0
NZ_AP019797.1|WP_012842997.1|546810_548082_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	1.9e-87	288.8	0.0
NZ_AP019797.1|WP_161542349.1|540818_541322_+|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	2.3e-23	77.8	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161540352.1|546223_546763_+|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl|CDD|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	9.09712e-15
NZ_AP019797.1|WP_161540349.1|538779_540705_+|glycoside-hydrolase-family-127-protein	gnl|CDD|369609	pfam07944, Glyco_hydro_127, Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.	0
NZ_AP019797.1|WP_161540350.1|541341_543972_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	2.40697e-83
NZ_AP019797.1|WP_161540353.1|549644_550538_+|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187850	cd09719, Cas1_I-E, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	2.34433e-92
NZ_AP019797.1|WP_012842999.1|548829_549627_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl|CDD|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	1.06537e-23
NZ_AP019797.1|WP_161540354.1|550509_550938_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl|CDD|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	1.20221e-28
NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	5.73504e-94
NZ_AP019797.1|WP_012842997.1|546810_548082_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl|CDD|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	5.2408e-121
NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.2803e-24
NZ_AP019797.1|WP_161540356.1|554002_556435_-|heavy-metal-translocating-P-type-ATPase	gnl|CDD|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase	gnl|CDD|273649	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family. This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273386	TIGR00999, Nickel-cobalt-cadmium_resistance_protein_NccB, Membrane Fusion Protein cluster 2 (function with RND porters). [Transport and binding proteins, Other].	7.7937e-49
NZ_AP019797.1|WP_161540351.1|544667_546227_+|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl|CDD|274192	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1972 from Chlorobium tepidum, is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It is designated Cse1.	9.59037e-23
NZ_AP019797.1|WP_012842998.1|548081_548840_+|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl|CDD|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	1.10642e-36
NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator	gnl|CDD|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	2.69608e-32
NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.62187e-38
NZ_AP019797.1|WP_161542349.1|540818_541322_+|3'-5'-exonuclease	gnl|CDD|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	7.38113e-23

Protein sequences

>NZ_AP019797.1|WP_161540354.1|550509_550938_+|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MAMTIAVTRNTPGRFRGFLASCMLEIAPGVYVAPRMPRDVRERVWQVLLSWAELIPPDGGVVLLWRNRKAPSGLDMRLLGWPKKELVEYEGLWLAWRGLTAAHDVEELARLVEAEEPPLEAGDPILRLVERPDLDEEEGSSL
>NZ_AP019797.1|WP_161540353.1|549644_550538_+|type-I-E-CRISPR-associated-endonuclease-Cas1
MVFKGRLGLESARVPQADRHGLLWLERGRLSAEDGTLVFTTAGTDRLAAGTYDIPLQQVSNILLGPGTVVSHDALRLLARQQTGLLAVGSGGVRLYAVSMPFGPDRSERARRHARLWADETRRLEVARAMYAIRLGGALPPYIQDLDTLRGIEGARVKESYRQLARQFGIDWRGRRYDRQHPELNDLVNNAINHAAVAVYAAARIAVAVTGTIPQLGFIHEASGHAFALDIADLFRTTVTVPVAFRAVRQFITEGGRDIESVTRTLAGRTLRDEEVIPRMIDYIKELIDGHDDRRDP
>NZ_AP019797.1|WP_012842999.1|548829_549627_+|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MKDNASQGRADPTPFHMVQLWLDVRRLYELGRMLDLFRARRPVSLSYLVHCALGELFQAQAPRPFAVEGENRRGPWVRVLGYADVPWETLQELARGFASPAVYAICGWDRGASKPMPTEIPRGMRLAFSVRVCPVVRKASAGQSPRGRRWQKGQELDVFLDAAWSQPEAVLDREAVYAEWLRRQMARPEKGGARVETVRMTRFSIERMTRRTNGSSRSVTVIQRPDVTLEGVLTVTDSAAFMRMLRRGVGRHTSFGYGMLKLRRA
>NZ_AP019797.1|WP_012842998.1|548081_548840_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MEILLLRFDAPLMSFGAPIVDQYGFIQPYPALSMMTGLLANALGYTHAETARLERLQERLRYAVREDRRGQQLRDFQTVDLSQPFLHDERAWTTRGTLETRQGGTASLGIHIRLRDYWADAVYTVALTLDPPDEPPTLADLEQALRFPARPLFIGRKPCLPAAPLFIGRVEAADLLDALRRAPLDARADRADFYRVWWETGPDDPPPVEGIRENLRRPVTDRRDWANQIHVGSRWIAMGELSVHPAGERHEG
>NZ_AP019797.1|WP_012842997.1|546810_548082_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MVSAFVQIHTLTAYPAALLNRDDAGFAKRLPFGGAIRTRVSSQCLKYHWRNFSGEHALYGLDVPRSLRSRETFKRCIARPLVEEGYPLRLVVAFALHLQKLIVSDESLSKTDFKKLMSDEVDDATLLDQLKSNQVIILGRPEVDYLTRRIRERLDALREVWADAAAPLSDEQLERVYQELQAIGKGELKKNLKGLYLAAGLDAALFGRMATSDVLARGDAAIHVAHAFTTHAEESESDYFTAVDELVAQEGEGELGSGHLNNQELTSGLFYGYVVVDVPLLVSNLEGVPPAAWQEADRTLAAEVVRRLLHLIATVSPGAKLGSTAPHAYAQFMLVEWGRSQPRTLANAFHRPVSLDGEGVLVNSYRALGRYVEQMDRMYGKLTERRLAAIDLPEAVQRQLQVDTLNAVPEIADWVAEKIQGGA
>NZ_AP019797.1|WP_161540352.1|546223_546763_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MKTQIQTEGPSITRGQAVGKAAGLLASEALSSGERAELRRIAFEAPFTAALWKVLFYLRDEGAPVRIGDEADERCWATLLMGMAHCIKLHDYQVPLGRALAEAGWSELRFTQLLRARGPQLAVFLRRMAQYLSAKNQLANWADVADLLFEQEGAKADTVRLRIARDYYARRYQQEREAA
>NZ_AP019797.1|WP_161540351.1|544667_546227_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MMRYALLDEPLIRVRFKDKTVRGCTLPEVIVALLRDAVLGFEALQPHQQQAWHSFLVQLVAMAVARITGDAFPKEAARWRQALVELAGGEEAAWYLVVSDLSRPAFMQPPVPEGSLEAARYKADVQTPDQLDVLITAKNHDLKARRIVQPRPEHWLFALVTLQTMEGFLGRGNYGIVRMNGGFGNRPLVGLTRALSPGAHFRRDVQVLLDARLSFADRYDLGGHALLWLLPWDGKKQSGIPLETCDPYFIEVCRRIRFLEENGHIVCWRANTEGPRVAAPKELNGVTGDPWTPVEKSDKPKALTVSDSGFTYRLLQQVFLSGDYEPPVALAFREDEKDGVYLVARTLVRGQGKTGGLHFRIVPVSQAAARWLSGSEERRTKLARRAEQRVRLAADVQRKVLYPALAALLSGGRDARVEWEQVTPWIEAFDRAVDAQFFDRLWASVEQDEETARRDWERFLLTEARRQFAVAEHGMPVASAHHWRARSRAHAIFEARSREVLPYAFNATRSLSTEQEVRS
>NZ_AP019797.1|WP_161540350.1|541341_543972_+|CRISPR-associated-helicase-Cas3'
MEGAPSPAQFWAKLRYTEERHPENIVAWHPLVAHAADVAAVVEALLQRTLLRKRLARLIGWNDLAEVHVARLAVLAALHDAGKANHGFQDQAFDPRVRSPGHVRPIVEILCADEPARWLEPLKIGEMAGWFVSEEVFYHFLLATWSHHGRPVLPEGDFRAHYWRPNARRDPRAAWRRLAELVRLWFPAAFADGAEPFPADPRFQHAFNGLLTLADWIGSDTRFFPYADETADPMCPIERAREGARQALQSLFLDAAGGRKALGDVPVGFRGVIEAGTPYPIQQACYDLPVHPQGSLTILESDTGSGKTEAAVARFFRLYQEGLVDGMYFALPTRSAASQIHRRITEIVARVFPEAHRPPVVLAVPGYLRVDEAEAVRLPDFQVLWDDEALRYRGWAAEHPKRYLAGPIVVGTIDQVLLAGLQVSHAHMRAAALLRHFLVVDEVHASAPYMTTLLERILAFHLAAGGHALLMSATLGSVARVRYATKGGTPPPLDEAEGERYPLLTHVDAGRQRLETVSAASSGREKPVTLRLEPIASDPQAIAERALQHARAGARVLLIRNRVEDCLAVQRALEEAACDDRSLLLTCNGQPVPHHGRYAPEDRRALDAAIEAAFGKNSPKRGIVAACTQTVEQSLDIDADLLITDLCPIDVLLQRIGRLHRHERPRPKGYEQAVCLVLTPAERDLTRTIQPDGGARGPHGLGTVYPDLRVIEATWRVLEGQNLWQIPRDNRRLVERATHPAVLQQIVREKGERWEAHQRHILGQEAANRYVPEITGLHFERPFGAHPFGRDIAPRTRLGDDDYRVELPEPVLGPFGWPVGTLPVASWMVGDELPEEPKARDVTPFDGGFSFVFAGRRFHYDRLGLRKDFNEALELS
>NZ_AP019797.1|WP_161542349.1|540818_541322_+|3'-5'-exonuclease
MPLEVAPLLFFDVETSGLRPDRGAAIVELALLGAREPLLLWKGTSAQRLQRAQFRELFAHVREGVVVGHNLRFDFWFVTYEAGRLGLSVPPIRFIDTLGLARRLLPEQADYRLVALLHALGIEPDNPLHTAVADAQATRALFWKLVERGKLRTLADAGMKQLTWTHR
>NZ_AP019797.1|WP_161540349.1|538779_540705_+|glycoside-hydrolase-family-127-protein
MPTRICWILLSGLLLSHTLQAQPLTAETDARSRERLRAFAFPPRAVRLLDSPFLEAMQRDVAYLFELDPDRLLSRFRRFAGLEPKAPEYGGWESQGISGHTLGHYLSALSMYYAATGDEKARARIDYIVSELAEVQRAHGNGYVGAIPEGDRLWAEIARGEIWQAEPFSLNGAWVPWYTMHKIFQGLIDAYWYGGSEQALEVVTRLADWAYETTKNLTPAQWQQMLRTEHGGMNEALANLYSITGNPKHRELSEKFYHAAVLSPLARGIPNLTGLHANTQIPKVIGVVRQYELIGSDSLRAVAEFFWEEVVQHHTYVIGGNSQNEHFGPRDSLANRLGEGTAETCNTYNMLRLTRHLFALHPEKVRYVDFYERALYNHILASQDPKRGMFTYYMSLRPGHFKTYATPEHSFWCCVGIGMENHVKYNEFIYFYNGDTLYVNLFIPSELNWERRALRLRLETAFPESNRVRLDFDPEVPQRLVVKVRHPSWAQDALDVRINGEVQSVTSRPGSYLTLARVWQPGDEVEITLPMRLRVETMPDNPDRFAILYGPIVLAGVFGSRGMPEGGAYAKDQWEFFGWPAPPVPKLCGDLNRVEDWVKPLATGGELRFHTVGVGKPADVLLKPFYEVHHERYTIYWDRCR
>NZ_AP019797.1|WP_161540355.1|553320_553998_-|hypothetical-protein
MSDKRQHEKEIQEEELEELLEGEEFDELLRYTVPGYVLSLVVGWFFDVQGMERSAVGQWIVRTLAGEGESIFEGLFALKKRLQQQAFSMAQAYGWGKAIGMVVPWIIDWGSRAAGIDVYGVEGFYIPFFYAMSDQLGANIAGFVYLRRRTGSTRETLSTYFTHPVMLSSLLVILLVPVGLLGARLLGFSPTTQVYTALETIAANLCWVPPLVGMLVERRAQRQNP
>NZ_AP019797.1|WP_161540356.1|554002_556435_-|heavy-metal-translocating-P-type-ATPase
MAKIRIELPIILPEIPDERDPCVQRLIEALSAKPGIERVHVLPPENGTPARLCVHYDPEQVRLEDIRRWVRQTGARLTEAYGHLILPVSGIRNVRHAQRLEHQLQHKPGILDVQVSPAGIVRIEYDRQQLTEADIRTLLNRLGLVPRETSLPHPHEKEEEHAHGGVFGERTELIFALLAGFFLVLGWVGATWLGFPPLLSRISYLAAYFFGGYYTVIETLESLKQRRLNIDFLMLAAAAGAAVLGHWAEGAFLLFLFSLGHALEHYAMGRAQRAIRSLSELMPRTALRKENGTLKEVPVEALQVGDVVVVRPGERIPVDGIVMEGQSSVNQAPVTGESIPVDKQPHPQPDAALKQWERLSDTYRVFAGTINGNGTLVILVARRSQDSTIARLVQLVMEAETAKSPTQRFTERFERIFVPAVLAFDVLVFIGGIGLIGWPVELAFYRAMAILVAASPCALAISTPSAILSGIARAAQLGVLVKGGAPLETLALVRAMAFDKTGTLTMGQPQVTDILPTEDSLKERLFETLLAVERLSDHPLAEAVVQYIEQQMTLSSLPDPEEVETIPGHGIRGYMEGERVLIGNLRLFEREQIPVPESLQRQLAALEQDGKTTMLVYRGDRFLGIVALRDNPRPEAPSVIQELRALGIQRMILISGDNQRVAQAIARQVGIEEAWGNLLPEDKVKAIRRLRAETPPVAMVGDGINDAPALAQADVGIAMGAAGSDLALETADIALMANSLTGLPFARALSLKTRRIIQQNLWVSLGMVAILIPAALLGLQLSLAVVFHEGSTLVVVFNALRLLRFTYQPA
>NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator
MKAIHAYIKRHKLSAVTLALRKLDTLTGVTVIDTRGFGRGRAENEPHRIVEDLVDYVPGVKLEIVCLDELVEEVVQIIQEKAHTGLRGDGKIYIYPVEDAIRISTGERGPSAV
>NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MNKLIQFTLRNRLLMLVLGALIMGAGYYSYTTLPVDAFPDVSPSLVQVFTVTEGLAPQEVEQYVTYPIEAAMNGLPDVERIRSISNFGLSVVNIYFKDGTDIYFARQLVNERLQEVRAEIPEGFGTPQLGPISTGMGLILFYYLDDTTGKYSLTELRTIQDWLIKYHLQTVPGVTEVLGIGGFEKQFHVNVDPEALLKYNLTINEIIERIEANNLNVGAQFLEKNDEEFIVRSVGLATGVNDLRNIVIKTVDGTPIYLHDVADVRIGGAIRRGVQTRNGLGEVVAGMVIKLYGSNASTVIGRVEQRLAEINKMLPEGVRIVPYYEQKTLVQAAVHTVTSALIQGILLVILVLVAFLGSWRPSVVVALSIPFSVLFATLGMKHFGISANLMSLGGLAIAIGMMVDGTIVMIENVDRLLRTADPDEPRLHVIARACMEVARPIVFAISIIVIVFLPLFTLQGVEGKTFRPLAYTTAMAMFGSLLFALLLAPTLSSLLMKRPRKERTRPPLAERILTRMMEAYRPVVTYFVHHRKKAVMLAAGLLVVGASVFPFLGSEFTPTLQEGTMVLRLTMAPSISLEAAKEMALRVERKVMQIPEVTGTVTRIGRGEVGAHTDPINSAEMYILLKPRDEWRVDTQEELEVLIRQSLGEIPGVLTNFTQPIQMTVDELLEGVRAELAIKLFGEDLQTLKEKADEIAAVVQRVRGAADVQPDQIAGKPQLRIRVDREAIARYGLNVEDVQRTVRAAIGGEEAGQIFEGVRRFDIYVRYTPEHRTTVEDVRNLLIPSPENERLRIPLEEVALIEEIVGPRQITRENNQRFITIQANVVGRDIGTFVQEAQQAIDAQVDLPPGYYVTWGGQFRLQQEANKRLMVVIPITLLLIFILLYSSFNSLKNSLLILLNIPLALVGGIVALALTGQNLSVPASVGFIALFGIALENGMVLVTYLNKLVRDGIPIDEASIEGALLRLRPVLMTALTTSLGLIPLLATGTGSEVQRPLATVVIGGLVTSTILTLLVLPALYKWFAIEPEAL
>NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYPALLIVLTIAFLTGCGDEPETSPTPATEHAEEMVTLPLEVLQDYGVVLDTARAGTITVTVALPGEIKVNEDRLVHVVPRVPGIVQQAFYTVGDRVQQGARMALLESRELAELQGAYLAALERYKLARANAEREARLFRQNIASEQEYLEAQQQLAEATIELQIARQKLLALGFSQAYVDSLPQLPEEQLARYELRAPLSGIVVDRHLALGEALEANDVAFTIADLRTVWIDLSVYPRDLPRIQAGQPVTIQLGHGLPVIKTRIRFVRPILGEETRTAIARAVVRNPEGLYKPGTFVTGQIEVGSIQADIVVPKTAILYMNEQPVVFVYTGEGFKPVPVTIGLENDTLVQLTGGLRPGDVYVRKGGFVLRAELEKSEMEEGHGH
>NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein
MRYVVYLCIWIACYALPAFAQSSPPDTLRLEQALQQALQEHPAAQTAQWRTEAAKGQIRQAGLWPNPVIEVEAEEWSSGQSPGGLFYRLSQDVLLGRKLHRQVQFARRTYEATQYEAFVVQLTVAQQLTEAYFNALVARRRMQLAEQLSGLATRLYATITSMVEAGKLSPVEQQRVRVEKSRAEAQYLEARRSYDVARSQLAAALGQPILPDVVLEDVLDTLRTPPPYDRLAEKLRAHPLLQQLEALQQAAQARERLERARRWPDIGITVGTQQLADTPKRFLTVGFTLPIPLFHRNQGAIQAARATYQATVAEWKNARIALETSLQATYSRLLATYRELQLLKQEALPAAEQAYEAIREGYQQGKFNVLDVLDSQRTFFEIEMQYVDVLARYHRTYIQLQALTGQLLPFSSSN
>NZ_AP019797.1|WP_161540361.1|562422_562836_-|hypothetical-protein
MSLLLTLTLLIFPLSQMGWGGLLLCIESDGVTHVETLENADCLPALPITQHMAHRDSPAAFQGHVDQKDPCFDIPLVLSIVEHRVSVPVAYVSLPVVFQTAYVSLPEPAPSLPRFEVSGHVPASPALTTLQTVVLRI
>NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein
MRSRRSFLKQFALGSTVLGLGGGGLLLEGCSRLAPAEGATLPSFVPLSGRGGAQRYRLVAEVGEVEVGPGEVYRTWLYNGQFPGPEIRVREGDVLEVEVENRLPEGTTVHWHGLPVPNAMDGVPGLTQDPIPPGEIFLYRFTAGPAGSYLYHSHVGLQLDRGLIAPLVVEETTPHVAYDREYTVVLDDYLPGDPEPLTGVMMGPRMMRRRGMMGGVVTPPYRGLLVNGRLPSAPVTFEVKQGERVRFRLMNPSGATTFRVALAGHRMWVTHTDGRPVEPYEVDSLYIAMGERYDVVVEMNHPGAWNLMALPVEVQAPPARAVVRYAGVQDADPPLRALPEGLRRGRVLNLSRLVSVELENTAPVRPDRVFRMTLSGGMMGGRWTINGQAYPDADPLLIEEGMHVGVQMFNMSMMLHPMHLHGHFFRTGRILKDTLTVRPHMGRGSFVFRADNPGRWFFHCHNVYHLEAGMAREFRYTSS
>NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein
MARTAPFDQYPERYDAWFDRHEMAYRSELEALRKLWPPEARETLEVGVGTGRFALPLGIRLGVEPSETMRRVAEARGLTVVPGTGEALPFEDHRFDAVLMVTTLCFLDDPARAFWEIHRVLKPGGYVVVGFIDRESHLGKTYEREKVRNPFYREATFYSTSEVLDLLCEAGFRHVAMVQTIFTFPDRMTRPDPVEPGYGRGAFVALRAQKPAPDHEEV
>NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase
MKNIPSSRNRREFLQALLALGVTAGLEALLPPYARAIPRVMGPPEPVEGPRIFELELREVPFTVGGKTGHATAINGTVPGPLLRFREGEEVILRVTNRLKEDSSIHWHGLLVPFDMDGVPGVSFPGIRPGETYEYRYRVRQHGTYWYHSHSGLQEQTGIYGPIIIDPEGPEPYPYDREYVVMLSDWTFENPMRVLSNLRKYPGYYNFQRRTLLDLPEEIREKGLKAAIQDRLAWGRMRMDVRDLVDITGATYTYLMNGRAPGDNWTALFKPGERVRLRFINAAADSFFDVRIPGLRMTVIQADGQYVQPVVVDEFRIGIAETYDVIVEPKEEQAYTIFAESLDRSGYARGTLAPQEGMEGPIPPRRKPPYRSMKDMGMMHGDMEGMSHGNMQGMSHGGHGMMMGGMAMAGKDSQPPGMPPAPRAHPKDRHSPTNAAIPMMTFSRLHEPGIGLGQDGWRVLVYTDLKTLYPREDFRPPTREIEMHLTGNMERFLWSIDGKAYSEAPEPIEIKYGERVRLTLVNDTMMEHPMHLHGMWMELENGHGRWIPRKHTVIVKPAERLSVLITPDEPGPWVFHCHILYHMEMGMFRVFQVLEPKAETSDEKYT

Crispr_ID: NZ_AP019797_4

• CRISPR_ID: NZ_AP019797_4
• CRISPR_location: 569046-570898
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 30 spacers

Consensus repeat of NZ_AP019797_4

Consensus_repeat	Method
CCCCGCACCCGCGGGGATAGTCC	CRT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCC	PILER-CR

spacers of NZ_AP019797_4

>4.1|569069|37|NZ_AP019797|CRT
CACAGAGGAGTACGAAGAACGCAGGCGCATACGGTGT
>4.2|569129|38|NZ_AP019797|CRT
CGCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGAGGTGT
>4.3|569190|38|NZ_AP019797|CRT
CCTCCGGATGAGATTTTTCGCCTATGCGTAGCGGGTGT
>4.4|569251|38|NZ_AP019797|CRT
CCGCTTCAAGCCCGACTTCGTGGGCGACGTGAAGGTGT
>4.5|569312|38|NZ_AP019797|CRT
CGACCGTCTCCCCATCCTGCTGGGCCTTGTCGAGGTGT
>4.6|569373|38|NZ_AP019797|CRT
TTCGATCTCCTGGTCGCCGATCCGGATGACCTGGGTGT
>4.7|569434|38|NZ_AP019797|CRT
TTGCGCTTTGACGGACTCGGCCACCTGCACCAGGGTGT
>4.8|569495|38|NZ_AP019797|CRT
CGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTGGGTGC
>4.9|569556|38|NZ_AP019797|CRT
TTCGAATGGTGTGGTGTATAGGTACTTAGACGCGGTGC
>4.10|569617|38|NZ_AP019797|CRT
CTATGATCGACTTATGAAAAAGTTGAACATTCGGGTGC
>4.11|569678|38|NZ_AP019797|CRT
CTGTTGATTACGTCCGCTTCGTAAACATCGCGCGGTGC
>4.12|569739|38|NZ_AP019797|CRT
CAGCACCCGCTCGGTCGATCCGTCCGGGCCGCCGGTGC
>4.13|569800|38|NZ_AP019797|CRT
CGTGATCGTGCGCTCAGCCATTCTCTTGCCGCAGGTGC
>4.14|569861|38|NZ_AP019797|CRT
CTTCCTGCGTTTCCTACTACAGGCTTCGTCACGGGTGT
>4.15|569922|38|NZ_AP019797|CRT
TTCCTCGATCGGCACGGCCTCGACGCTGCGGTCGGTGT
>4.16|569983|38|NZ_AP019797|CRT
CAACAGGTGCGTCGGGGCATGTGCGCACAAAAAGGTGT
>4.17|570044|38|NZ_AP019797|CRT
GCAAAGAGATATGTCAACTGGCGTATCGGGGGAGGTGT
>4.18|570105|38|NZ_AP019797|CRT
CTGGATTGCACAATCGGTGCAAACTGGATTGCAGGTGT
>4.19|570166|38|NZ_AP019797|CRT
CGATTCAGGATGCGTCATCAGGTAGAGGATGTCGGTGT
>4.20|570227|38|NZ_AP019797|CRT
CTTGGTGAAGACGCGGCGCACCAGCCCAAAGCCGGTGT
>4.21|570288|38|NZ_AP019797|CRT
CGTTTGAAGTTGTGATATCGGGGTAGTAGAGATGGTGT
>4.22|570349|38|NZ_AP019797|CRT
TGCGCTGGACATAAAAAACGGAACGCTGGACGTGGTGT
>4.23|570410|38|NZ_AP019797|CRT
CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTCGGTGC
>4.24|570471|38|NZ_AP019797|CRT
TCTGCACCAGGTCGCGCATTTCATCGTCGATGCGGTGC
>4.25|570532|38|NZ_AP019797|CRT
CACGAAGTCATCAGGCACCACCGGCACCCGGTTGGTGT
>4.26|570593|38|NZ_AP019797|CRT
TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCCGGTGT
>4.27|570654|38|NZ_AP019797|CRT
CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGCGGTGT
>4.28|570715|38|NZ_AP019797|CRT
CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAGGGTGT
>4.29|570776|38|NZ_AP019797|CRT
TTCTATCGAGTCGGGATCGATGATGCCCCGCCAGGTGT
>4.30|570837|38|NZ_AP019797|CRT
CCAAACCAACAGAGCCATGAGATCGTCTCTCACGGTGT
>4.31|569130|32|NZ_AP019797|PILER-CR,CRISPRCasFinder
GCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGA
>4.32|569191|32|NZ_AP019797|PILER-CR,CRISPRCasFinder
CTCCGGATGAGATTTTTCGCCTATGCGTAGCG
>4.33|569252|32|NZ_AP019797|PILER-CR,CRISPRCasFinder
CGCTTCAAGCCCGACTTCGTGGGCGACGTGAA
>4.34|569313|32|NZ_AP019797|CRISPRCasFinder
GACCGTCTCCCCATCCTGCTGGGCCTTGTCGA
>4.35|569374|32|NZ_AP019797|CRISPRCasFinder
TCGATCTCCTGGTCGCCGATCCGGATGACCTG
>4.36|569435|32|NZ_AP019797|CRISPRCasFinder
TGCGCTTTGACGGACTCGGCCACCTGCACCAG
>4.37|569496|32|NZ_AP019797|CRISPRCasFinder
GTCACGAAGAAAGGCTCAGGAAGCAGGTCCTG
>4.38|569557|32|NZ_AP019797|CRISPRCasFinder
TCGAATGGTGTGGTGTATAGGTACTTAGACGC
>4.39|569618|32|NZ_AP019797|CRISPRCasFinder
TATGATCGACTTATGAAAAAGTTGAACATTCG
>4.40|569679|32|NZ_AP019797|CRISPRCasFinder
TGTTGATTACGTCCGCTTCGTAAACATCGCGC
>4.41|569740|32|NZ_AP019797|CRISPRCasFinder
AGCACCCGCTCGGTCGATCCGTCCGGGCCGCC
>4.42|569801|32|NZ_AP019797|CRISPRCasFinder
GTGATCGTGCGCTCAGCCATTCTCTTGCCGCA
>4.43|569862|32|NZ_AP019797|CRISPRCasFinder
TTCCTGCGTTTCCTACTACAGGCTTCGTCACG
>4.44|569923|32|NZ_AP019797|CRISPRCasFinder
TCCTCGATCGGCACGGCCTCGACGCTGCGGTC
>4.45|569984|32|NZ_AP019797|CRISPRCasFinder
AACAGGTGCGTCGGGGCATGTGCGCACAAAAA
>4.46|570045|32|NZ_AP019797|CRISPRCasFinder
CAAAGAGATATGTCAACTGGCGTATCGGGGGA
>4.47|570106|32|NZ_AP019797|CRISPRCasFinder
TGGATTGCACAATCGGTGCAAACTGGATTGCA
>4.48|570167|32|NZ_AP019797|CRISPRCasFinder
GATTCAGGATGCGTCATCAGGTAGAGGATGTC
>4.49|570228|32|NZ_AP019797|CRISPRCasFinder
TTGGTGAAGACGCGGCGCACCAGCCCAAAGCC
>4.50|570289|32|NZ_AP019797|CRISPRCasFinder
GTTTGAAGTTGTGATATCGGGGTAGTAGAGAT
>4.51|570350|32|NZ_AP019797|CRISPRCasFinder
GCGCTGGACATAAAAAACGGAACGCTGGACGT
>4.52|570411|32|NZ_AP019797|CRISPRCasFinder
TGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
>4.53|570472|32|NZ_AP019797|CRISPRCasFinder
CTGCACCAGGTCGCGCATTTCATCGTCGATGC
>4.54|570533|32|NZ_AP019797|CRISPRCasFinder
ACGAAGTCATCAGGCACCACCGGCACCCGGTT
>4.55|570594|32|NZ_AP019797|CRISPRCasFinder
CTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
>4.56|570655|32|NZ_AP019797|CRISPRCasFinder
CTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
>4.57|570716|32|NZ_AP019797|CRISPRCasFinder
GGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
>4.58|570777|32|NZ_AP019797|CRISPRCasFinder
TCTATCGAGTCGGGATCGATGATGCCCCGCCA
>4.59|570838|32|NZ_AP019797|CRISPRCasFinder
CAAACCAACAGAGCCATGAGATCGTCTCTCAC
>4.60|569434|33|NZ_AP019797|PILER-CR
TTGCGCTTTGACGGACTCGGCCACCTGCACCAG
>4.61|569495|33|NZ_AP019797|PILER-CR
CGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTG
>4.62|569556|33|NZ_AP019797|PILER-CR
TTCGAATGGTGTGGTGTATAGGTACTTAGACGC
>4.63|569617|33|NZ_AP019797|PILER-CR
CTATGATCGACTTATGAAAAAGTTGAACATTCG
>4.64|569678|33|NZ_AP019797|PILER-CR
CTGTTGATTACGTCCGCTTCGTAAACATCGCGC
>4.65|569739|33|NZ_AP019797|PILER-CR
CAGCACCCGCTCGGTCGATCCGTCCGGGCCGCC
>4.66|569800|33|NZ_AP019797|PILER-CR
CGTGATCGTGCGCTCAGCCATTCTCTTGCCGCA
>4.67|569861|33|NZ_AP019797|PILER-CR
CTTCCTGCGTTTCCTACTACAGGCTTCGTCACG
>4.68|569922|33|NZ_AP019797|PILER-CR
TTCCTCGATCGGCACGGCCTCGACGCTGCGGTC
>4.69|569983|33|NZ_AP019797|PILER-CR
CAACAGGTGCGTCGGGGCATGTGCGCACAAAAA
>4.70|570044|33|NZ_AP019797|PILER-CR
GCAAAGAGATATGTCAACTGGCGTATCGGGGGA
>4.71|570105|33|NZ_AP019797|PILER-CR
CTGGATTGCACAATCGGTGCAAACTGGATTGCA
>4.72|570166|33|NZ_AP019797|PILER-CR
CGATTCAGGATGCGTCATCAGGTAGAGGATGTC
>4.73|570227|33|NZ_AP019797|PILER-CR
CTTGGTGAAGACGCGGCGCACCAGCCCAAAGCC
>4.74|570288|33|NZ_AP019797|PILER-CR
CGTTTGAAGTTGTGATATCGGGGTAGTAGAGAT
>4.75|570349|33|NZ_AP019797|PILER-CR
TGCGCTGGACATAAAAAACGGAACGCTGGACGT
>4.76|570410|33|NZ_AP019797|PILER-CR
CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
>4.77|570471|33|NZ_AP019797|PILER-CR
TCTGCACCAGGTCGCGCATTTCATCGTCGATGC
>4.78|570532|33|NZ_AP019797|PILER-CR
CACGAAGTCATCAGGCACCACCGGCACCCGGTT
>4.79|570593|33|NZ_AP019797|PILER-CR
TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
>4.80|570654|33|NZ_AP019797|PILER-CR
CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
>4.81|570715|33|NZ_AP019797|PILER-CR
CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
>4.82|570776|33|NZ_AP019797|PILER-CR
TTCTATCGAGTCGGGATCGATGATGCCCCGCCA
>4.83|570837|33|NZ_AP019797|PILER-CR
CCAAACCAACAGAGCCATGAGATCGTCTCTCAC

CRISPR arrays and Neighbor proteins around NZ_AP019797_4

CRISPR arrays

The CRISPR arrays of NZ_AP019797_4

>merge|NZ_AP019797|4|569046-570898|CRT,PILER-CR,CRISPRCasFinder,PILER-CR
CGGTATGCCCGCGGGGAGATCTCCACAGAGGAGTACGAAGAACGCAGGCGCATACGGTGTCCCCGCACCCGCGGGGATAGTCCCGCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGAGGTGTCCCCGCACCCGCGGGGATAGTCCCCTCCGGATGAGATTTTTCGCCTATGCGTAGCGGGTGTCCCCGCACCCGCGGGGATAGTCCCCGCTTCAAGCCCGACTTCGTGGGCGACGTGAAGGTGTCCCCGCACCCGCGGGGATAGTCCCGACCGTCTCCCCATCCTGCTGGGCCTTGTCGAGGTGTCCCCGCACCCGCGGGGATAGTCCTTCGATCTCCTGGTCGCCGATCCGGATGACCTGGGTGTCCCCGCACCCGCGGGGATAGTCCTTGCGCTTTGACGGACTCGGCCACCTGCACCAGGGTGTCCCCGCACCCGCGGGGATAGTCCCGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTGGGTGCCCCCGCACCCGCGGGGATAGTCCTTCGAATGGTGTGGTGTATAGGTACTTAGACGCGGTGCCCCCGCACCCGCGGGGATAGTCCCTATGATCGACTTATGAAAAAGTTGAACATTCGGGTGCCCCCGCACCCGCGGGGATAGTCCCTGTTGATTACGTCCGCTTCGTAAACATCGCGCGGTGCCCCCGCACCCGCGGGGATAGTCCCAGCACCCGCTCGGTCGATCCGTCCGGGCCGCCGGTGCCCCCGCACCCGCGGGGATAGTCCCGTGATCGTGCGCTCAGCCATTCTCTTGCCGCAGGTGCCCCCGCACCCGCGGGGATAGTCCCTTCCTGCGTTTCCTACTACAGGCTTCGTCACGGGTGTCCCCGCACCCGCGGGGATAGTCCTTCCTCGATCGGCACGGCCTCGACGCTGCGGTCGGTGTCCCCGCACCCGCGGGGATAGTCCCAACAGGTGCGTCGGGGCATGTGCGCACAAAAAGGTGTCCCCGCACCCGCGGGGATAGTCCGCAAAGAGATATGTCAACTGGCGTATCGGGGGAGGTGTCCCCGCACCCGCGGGGATAGTCCCTGGATTGCACAATCGGTGCAAACTGGATTGCAGGTGTCCCCGCACCCGCGGGGATAGTCCCGATTCAGGATGCGTCATCAGGTAGAGGATGTCGGTGTCCCCGCACCCGCGGGGATAGTCCCTTGGTGAAGACGCGGCGCACCAGCCCAAAGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCGTTTGAAGTTGTGATATCGGGGTAGTAGAGATGGTGTCCCCGCACCCGCGGGGATAGTCCTGCGCTGGACATAAAAAACGGAACGCTGGACGTGGTGTCCCCGCACCCGCGGGGATAGTCCCTGCTGGAGGTCTGATGCTGAGCGGCTACCGTCGGTGCCCCCGCACACGCGGGGATAGTCCTCTGCACCAGGTCGCGCATTTCATCGTCGATGCGGTGCCCCCGCACACGCGGGGATAGTCCCACGAAGTCATCAGGCACCACCGGCACCCGGTTGGTGTCCCCGCACCCGCGGGGATAGTCCTCTTCCGGAAGGTTGAACAGCAGAACGCGCGCCGGTGTCCCCGCACCCGCGGGGATAGTCCCCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGCGGTGTCCCCGCACCCGCGGGGATAGTCCCGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAGGGTGTCCCCGCACCCGCGGGGATAGTCCTTCTATCGAGTCGGGATCGATGATGCCCCGCCAGGTGTCCCCGCACCCGCGGGGATAGTCCCCAAACCAACAGAGCCATGAGATCGTCTCTCACGGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019797|4|2|569046-570897|CRT
CGGTATGCCCGCGGGGAGATCTC	CACAGAGGAGTACGAAGAACGCAGGCGCATACGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGAGGTGT
CCCCGCACCCGCGGGGATAGTCC	CCTCCGGATGAGATTTTTCGCCTATGCGTAGCGGGTGT
CCCCGCACCCGCGGGGATAGTCC	CCGCTTCAAGCCCGACTTCGTGGGCGACGTGAAGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGACCGTCTCCCCATCCTGCTGGGCCTTGTCGAGGTGT
CCCCGCACCCGCGGGGATAGTCC	TTCGATCTCCTGGTCGCCGATCCGGATGACCTGGGTGT
CCCCGCACCCGCGGGGATAGTCC	TTGCGCTTTGACGGACTCGGCCACCTGCACCAGGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTGGGTGC
CCCCGCACCCGCGGGGATAGTCC	TTCGAATGGTGTGGTGTATAGGTACTTAGACGCGGTGC
CCCCGCACCCGCGGGGATAGTCC	CTATGATCGACTTATGAAAAAGTTGAACATTCGGGTGC
CCCCGCACCCGCGGGGATAGTCC	CTGTTGATTACGTCCGCTTCGTAAACATCGCGCGGTGC
CCCCGCACCCGCGGGGATAGTCC	CAGCACCCGCTCGGTCGATCCGTCCGGGCCGCCGGTGC
CCCCGCACCCGCGGGGATAGTCC	CGTGATCGTGCGCTCAGCCATTCTCTTGCCGCAGGTGC
CCCCGCACCCGCGGGGATAGTCC	CTTCCTGCGTTTCCTACTACAGGCTTCGTCACGGGTGT
CCCCGCACCCGCGGGGATAGTCC	TTCCTCGATCGGCACGGCCTCGACGCTGCGGTCGGTGT
CCCCGCACCCGCGGGGATAGTCC	CAACAGGTGCGTCGGGGCATGTGCGCACAAAAAGGTGT
CCCCGCACCCGCGGGGATAGTCC	GCAAAGAGATATGTCAACTGGCGTATCGGGGGAGGTGT
CCCCGCACCCGCGGGGATAGTCC	CTGGATTGCACAATCGGTGCAAACTGGATTGCAGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGATTCAGGATGCGTCATCAGGTAGAGGATGTCGGTGT
CCCCGCACCCGCGGGGATAGTCC	CTTGGTGAAGACGCGGCGCACCAGCCCAAAGCCGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGTTTGAAGTTGTGATATCGGGGTAGTAGAGATGGTGT
CCCCGCACCCGCGGGGATAGTCC	TGCGCTGGACATAAAAAACGGAACGCTGGACGTGGTGT
CCCCGCACCCGCGGGGATAGTCC	CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTCGGTGC
CCCCGCACACGCGGGGATAGTCC	TCTGCACCAGGTCGCGCATTTCATCGTCGATGCGGTGC
CCCCGCACACGCGGGGATAGTCC	CACGAAGTCATCAGGCACCACCGGCACCCGGTTGGTGT
CCCCGCACCCGCGGGGATAGTCC	TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCCGGTGT
CCCCGCACCCGCGGGGATAGTCC	CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGCGGTGT
CCCCGCACCCGCGGGGATAGTCC	CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAGGGTGT
CCCCGCACCCGCGGGGATAGTCC	TTCTATCGAGTCGGGATCGATGATGCCCCGCCAGGTGT
CCCCGCACCCGCGGGGATAGTCC	CCAAACCAACAGAGCCATGAGATCGTCTCTCACGGTGT
CCCCGCACCCGCGGGGATAGTCC

>NZ_AP019797|4|2|569101-569312|PILER-CR
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTCCGGATGAGATTTTTCGCCTATGCGTAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGCTTCAAGCCCGACTTCGTGGGCGACGTGAA
GGTGTCCCCGCACCCGCGGGGATAGTCCCGACCGTCTCCCCATCCTGCTGGGCCTTGTCGAGGTGTCCCCGCACCCGCGGGGATAGTCCTTCGATCTCCTGGTCGCCGATCCGGATGACCTGGGTGTCCCCGCACCCGCGGGGATAGTCC	TTGCGCTTTGACGGACTCGGCCACCTGCACCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTG
GGTGCCCCCGCACCCGCGGGGATAGTCC	TTCGAATGGTGTGGTGTATAGGTACTTAGACGC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTATGATCGACTTATGAAAAAGTTGAACATTCG
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTGTTGATTACGTCCGCTTCGTAAACATCGCGC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CAGCACCCGCTCGGTCGATCCGTCCGGGCCGCC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CGTGATCGTGCGCTCAGCCATTCTCTTGCCGCA
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTTCCTGCGTTTCCTACTACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCCTCGATCGGCACGGCCTCGACGCTGCGGTC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACAGGTGCGTCGGGGCATGTGCGCACAAAAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	GCAAAGAGATATGTCAACTGGCGTATCGGGGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGGATTGCACAATCGGTGCAAACTGGATTGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGATTCAGGATGCGTCATCAGGTAGAGGATGTC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGGTGAAGACGCGGCGCACCAGCCCAAAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTTTGAAGTTGTGATATCGGGGTAGTAGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TGCGCTGGACATAAAAAACGGAACGCTGGACGT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCC	TCTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCC	CACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAACCAACAGAGCCATGAGATCGTCTCTCAC


>NZ_AP019797|4|4|569101-570898|CRISPRCasFinder
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTCCGGATGAGATTTTTCGCCTATGCGTAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGCTTCAAGCCCGACTTCGTGGGCGACGTGAA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GACCGTCTCCCCATCCTGCTGGGCCTTGTCGA
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCGATCTCCTGGTCGCCGATCCGGATGACCTG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TGCGCTTTGACGGACTCGGCCACCTGCACCAG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GTCACGAAGAAAGGCTCAGGAAGCAGGTCCTG
GGTGCCCCCGCACCCGCGGGGATAGTCCT	TCGAATGGTGTGGTGTATAGGTACTTAGACGC
GGTGCCCCCGCACCCGCGGGGATAGTCCC	TATGATCGACTTATGAAAAAGTTGAACATTCG
GGTGCCCCCGCACCCGCGGGGATAGTCCC	TGTTGATTACGTCCGCTTCGTAAACATCGCGC
GGTGCCCCCGCACCCGCGGGGATAGTCCC	AGCACCCGCTCGGTCGATCCGTCCGGGCCGCC
GGTGCCCCCGCACCCGCGGGGATAGTCCC	GTGATCGTGCGCTCAGCCATTCTCTTGCCGCA
GGTGCCCCCGCACCCGCGGGGATAGTCCC	TTCCTGCGTTTCCTACTACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCCTCGATCGGCACGGCCTCGACGCTGCGGTC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	AACAGGTGCGTCGGGGCATGTGCGCACAAAAA
GGTGTCCCCGCACCCGCGGGGATAGTCCG	CAAAGAGATATGTCAACTGGCGTATCGGGGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TGGATTGCACAATCGGTGCAAACTGGATTGCA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GATTCAGGATGCGTCATCAGGTAGAGGATGTC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TTGGTGAAGACGCGGCGCACCAGCCCAAAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GTTTGAAGTTGTGATATCGGGGTAGTAGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCCT	GCGCTGGACATAAAAAACGGAACGCTGGACGT
GGTGTCCCCGCACCCGCGGGGATAGTCCC	TGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCCT	CTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCCC	ACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCCT	CTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCCC	GGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCCT	TCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CAAACCAACAGAGCCATGAGATCGTCTCTCAC
GGTGTCCCCGCACCCGCGGGGATAGTCCC

>NZ_AP019797|4|3|569406-570897|PILER-CR
	GCAGTAGTCGGCTGGCGGGAGTGTCTTAAGGA
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CTCCGGATGAGATTTTTCGCCTATGCGTAGCG
GGTGTCCCCGCACCCGCGGGGATAGTCCC	CGCTTCAAGCCCGACTTCGTGGGCGACGTGAA
GGTGTCCCCGCACCCGCGGGGATAGTCCCGACCGTCTCCCCATCCTGCTGGGCCTTGTCGAGGTGTCCCCGCACCCGCGGGGATAGTCCTTCGATCTCCTGGTCGCCGATCCGGATGACCTGGGTGTCCCCGCACCCGCGGGGATAGTCC	TTGCGCTTTGACGGACTCGGCCACCTGCACCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTCACGAAGAAAGGCTCAGGAAGCAGGTCCTG
GGTGCCCCCGCACCCGCGGGGATAGTCC	TTCGAATGGTGTGGTGTATAGGTACTTAGACGC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTATGATCGACTTATGAAAAAGTTGAACATTCG
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTGTTGATTACGTCCGCTTCGTAAACATCGCGC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CAGCACCCGCTCGGTCGATCCGTCCGGGCCGCC
GGTGCCCCCGCACCCGCGGGGATAGTCC	CGTGATCGTGCGCTCAGCCATTCTCTTGCCGCA
GGTGCCCCCGCACCCGCGGGGATAGTCC	CTTCCTGCGTTTCCTACTACAGGCTTCGTCACG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCCTCGATCGGCACGGCCTCGACGCTGCGGTC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CAACAGGTGCGTCGGGGCATGTGCGCACAAAAA
GGTGTCCCCGCACCCGCGGGGATAGTCC	GCAAAGAGATATGTCAACTGGCGTATCGGGGGA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGGATTGCACAATCGGTGCAAACTGGATTGCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGATTCAGGATGCGTCATCAGGTAGAGGATGTC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTTGGTGAAGACGCGGCGCACCAGCCCAAAGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGTTTGAAGTTGTGATATCGGGGTAGTAGAGAT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TGCGCTGGACATAAAAAACGGAACGCTGGACGT
GGTGTCCCCGCACCCGCGGGGATAGTCC	CTGCTGGAGGTCTGATGCTGAGCGGCTACCGTC
GGTGCCCCCGCACACGCGGGGATAGTCC	TCTGCACCAGGTCGCGCATTTCATCGTCGATGC
GGTGCCCCCGCACACGCGGGGATAGTCC	CACGAAGTCATCAGGCACCACCGGCACCCGGTT
GGTGTCCCCGCACCCGCGGGGATAGTCC	TCTTCCGGAAGGTTGAACAGCAGAACGCGCGCC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCTTTAAAGGTTGTGGCGTTTGGTTTCGTGTGC
GGTGTCCCCGCACCCGCGGGGATAGTCC	CGGTTTGAAAGGCTTGGGCGCGAAGTCGGCCAG
GGTGTCCCCGCACCCGCGGGGATAGTCC	TTCTATCGAGTCGGGATCGATGATGCCCCGCCA
GGTGTCCCCGCACCCGCGGGGATAGTCC	CCAAACCAACAGAGCCATGAGATCGTCTCTCAC
GGTGTCCCCGCACCCGCGGGGATAGTCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161540365.1|567698_567953_+|thioredoxin-family-protein	unknown	unknown	gnl|CDD|239274
NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273386
NZ_AP019797.1|WP_161540374.1|580356_581805_+|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143415
NZ_AP019797.1|WP_161540368.1|572301_574851_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540367.1|571568_572057_-|DinB-family-protein	unknown	unknown	gnl|CDD|225200
NZ_AP019797.1|WP_161540376.1|582461_584225_+|DUF885-family-protein	unknown	unknown	gnl|CDD|377577
NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein	unknown	unknown	gnl|CDD|225043
NZ_AP019797.1|WP_161540361.1|562422_562836_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|369777
NZ_AP019797.1|WP_161540372.1|578981_579323_+|DMT-family-protein	unknown	unknown	gnl|CDD|377316
NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase	unknown	unknown	gnl|CDD|273649
NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_AP019797.1|WP_161540375.1|581808_582465_+|GntR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224715
NZ_AP019797.1|WP_161540370.1|576114_577644_-|solute:sodium-symporter-family-transporter	unknown	unknown	gnl|CDD|271360
NZ_AP019797.1|WP_161540373.1|579419_580337_+|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl|CDD|188630
NZ_AP019797.1|WP_161540371.1|577666_578722_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase	unknown	unknown	gnl|CDD|236963
NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator	unknown	unknown	gnl|CDD|223424
NZ_AP019797.1|WP_161540369.1|574856_576101_-|galactokinase	unknown	unknown	gnl|CDD|223231
NZ_AP019797.1|WP_161540366.1|567994_568723_+|Spy/CpxP-family-protein-refolding-chaperone	unknown	unknown	gnl|CDD|197366
NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein	unknown	unknown	gnl|CDD|224455

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161540365.1|567698_567953_+|thioredoxin-family-protein	gnl|CDD|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	6.51619e-07
NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273386	TIGR00999, Nickel-cobalt-cadmium_resistance_protein_NccB, Membrane Fusion Protein cluster 2 (function with RND porters). [Transport and binding proteins, Other].	7.7937e-49
NZ_AP019797.1|WP_161540374.1|580356_581805_+|aldehyde-dehydrogenase-family-protein	gnl|CDD|143415	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.	0
NZ_AP019797.1|WP_161540367.1|571568_572057_-|DinB-family-protein	gnl|CDD|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	1.82093e-11
NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	5.73504e-94
NZ_AP019797.1|WP_161540376.1|582461_584225_+|DUF885-family-protein	gnl|CDD|377577	pfam05960, DUF885, Bacterial protein of unknown function (DUF885). This family consists of several hypothetical bacterial proteins several of which are putative membrane proteins.	0
NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.2803e-24
NZ_AP019797.1|WP_161540372.1|578981_579323_+|DMT-family-protein	gnl|CDD|377316	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486). This family contains several proteins of uncharacterized function. The family is represented in the Transport classification database as 2.A.7.34, though the exact nature of what is transported is not known.	6.46642e-57
NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase	gnl|CDD|273649	TIGR01480, unnamed_protein_product, copper-resistance protein, CopA family. This model represents the CopA copper resistance protein family. CopA is related to laccase (benzenediol:oxygen oxidoreductase) and L-ascorbate oxidase, both copper-containing enzymes. Most members have a typical TAT (twin-arginine translocation) signal sequence with an Arg-Arg pair. Twin-arginine translocation is observed for a large number of periplasmic proteins that cross the inner membrane with metal-containing cofactors already bound. The combination of copper-binding sites and TAT translocation motif suggests a mechansism of resistance by packaging and export. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds].	0
NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019797.1|WP_161540375.1|581808_582465_+|GntR-family-transcriptional-regulator	gnl|CDD|224715	COG1802, GntR, Transcriptional regulators [Transcription].	2.33813e-31
NZ_AP019797.1|WP_161540370.1|576114_577644_-|solute:sodium-symporter-family-transporter	gnl|CDD|271360	cd10325, SLC5sbd_vSGLT, Vibrio parahaemolyticus Na(+)/galactose cotransporter (vSGLT) and related proteins; solute binding domain. vSGLT transports D-galactose, D-glucose, and alpha-D-fucose, with a sugar specificity in the order of D-galactose >D-fucose >D-glucose. It transports one Na+ ion for each sugar molecule, and appears to function as a monomer. vSGLT has 13 transmembrane helices (TMs): TM-1, an inverted topology repeat: TMs1-5 and TMs6-10, and TMs 11-12 (TMs numbered to conform to the solute carrier 6 family Aquifex aeolicus LeuT). This subfamily belongs to the solute carrier 5 (SLC5) transporter family.	0
NZ_AP019797.1|WP_161540373.1|579419_580337_+|dihydrodipicolinate-synthase-family-protein	gnl|CDD|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.53161e-101
NZ_AP019797.1|WP_161540371.1|577666_578722_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase	gnl|CDD|236963	PRK11720, PRK11720, UDP-glucose--hexose-1-phosphate uridylyltransferase.	0
NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator	gnl|CDD|223424	COG0347, GlnK, Nitrogen regulatory protein PII [Amino acid transport and metabolism].	2.69608e-32
NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.62187e-38
NZ_AP019797.1|WP_161540366.1|567994_568723_+|Spy/CpxP-family-protein-refolding-chaperone	gnl|CDD|197366	cd09916, CpxP_like, CpxP component of the bacterial Cpx-two-component system and related proteins. This family summarizes bacterial proteins related to CpxP, a periplasmic protein that forms part of a two-component system which acts as a global modulator of cell-envelope stress in gram-negative bacteria. CpxP aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH. Functioning as a dimer, it inhibits activation of the kinase CpxA, but also plays a vital role in the quality control system of P pili. It has been suggested that CpxP directly interacts with CpxA via its concave polar surface. Another member of this family, Spy, is also a periplasmic protein that may be involved in the response to stress. The homology between CpxP and Spy suggests similar functions. A characteristic 5-residue sequence motif LTXXQ is found repeated twice in many members of this family.	1.27958e-07
NZ_AP019797.1|WP_161540369.1|574856_576101_-|galactokinase	gnl|CDD|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	7.98232e-146

Protein sequences

>NZ_AP019797.1|WP_161540366.1|567994_568723_+|Spy/CpxP-family-protein-refolding-chaperone
MRKLLIAGLLMSMPLLALGQQHGHMGGMMSQPDTTKKMMQGGMMGMMGGGMMQGGMMGGGMGMMGMVQQMGMMMQHPMHRAMAMVFALPYLEEELGLTEEQKKQLEALKQEFLQQHQATMQAMMGLHQTLMEKMQDPNASLDDIRATMQVMMNMGLNMHMLALETTRKMEQVLTEEQREKLRSFTPQQWMQAMMRHMPMMEMMHMMQMHGGMMGMGMMMGGGMGGMMQGGMRHGQMPMQRQH
>NZ_AP019797.1|WP_161540365.1|567698_567953_+|thioredoxin-family-protein
MANVRILATRTCHHRPYLEKELSRRGIPYEVVYTDERPDLVARYHIRHSPVLLVDDEVVFMGMPEGKALEAWIAQYRSGSFKQR
>NZ_AP019797.1|WP_161540364.1|565134_566955_+|copper-resistance-system-multicopper-oxidase
MKNIPSSRNRREFLQALLALGVTAGLEALLPPYARAIPRVMGPPEPVEGPRIFELELREVPFTVGGKTGHATAINGTVPGPLLRFREGEEVILRVTNRLKEDSSIHWHGLLVPFDMDGVPGVSFPGIRPGETYEYRYRVRQHGTYWYHSHSGLQEQTGIYGPIIIDPEGPEPYPYDREYVVMLSDWTFENPMRVLSNLRKYPGYYNFQRRTLLDLPEEIREKGLKAAIQDRLAWGRMRMDVRDLVDITGATYTYLMNGRAPGDNWTALFKPGERVRLRFINAAADSFFDVRIPGLRMTVIQADGQYVQPVVVDEFRIGIAETYDVIVEPKEEQAYTIFAESLDRSGYARGTLAPQEGMEGPIPPRRKPPYRSMKDMGMMHGDMEGMSHGNMQGMSHGGHGMMMGGMAMAGKDSQPPGMPPAPRAHPKDRHSPTNAAIPMMTFSRLHEPGIGLGQDGWRVLVYTDLKTLYPREDFRPPTREIEMHLTGNMERFLWSIDGKAYSEAPEPIEIKYGERVRLTLVNDTMMEHPMHLHGMWMELENGHGRWIPRKHTVIVKPAERLSVLITPDEPGPWVFHCHILYHMEMGMFRVFQVLEPKAETSDEKYT
>NZ_AP019797.1|WP_161540363.1|564393_565050_-|methyltransferase-domain-containing-protein
MARTAPFDQYPERYDAWFDRHEMAYRSELEALRKLWPPEARETLEVGVGTGRFALPLGIRLGVEPSETMRRVAEARGLTVVPGTGEALPFEDHRFDAVLMVTTLCFLDDPARAFWEIHRVLKPGGYVVVGFIDRESHLGKTYEREKVRNPFYREATFYSTSEVLDLLCEAGFRHVAMVQTIFTFPDRMTRPDPVEPGYGRGAFVALRAQKPAPDHEEV
>NZ_AP019797.1|WP_161540362.1|562969_564409_+|multicopper-oxidase-domain-containing-protein
MRSRRSFLKQFALGSTVLGLGGGGLLLEGCSRLAPAEGATLPSFVPLSGRGGAQRYRLVAEVGEVEVGPGEVYRTWLYNGQFPGPEIRVREGDVLEVEVENRLPEGTTVHWHGLPVPNAMDGVPGLTQDPIPPGEIFLYRFTAGPAGSYLYHSHVGLQLDRGLIAPLVVEETTPHVAYDREYTVVLDDYLPGDPEPLTGVMMGPRMMRRRGMMGGVVTPPYRGLLVNGRLPSAPVTFEVKQGERVRFRLMNPSGATTFRVALAGHRMWVTHTDGRPVEPYEVDSLYIAMGERYDVVVEMNHPGAWNLMALPVEVQAPPARAVVRYAGVQDADPPLRALPEGLRRGRVLNLSRLVSVELENTAPVRPDRVFRMTLSGGMMGGRWTINGQAYPDADPLLIEEGMHVGVQMFNMSMMLHPMHLHGHFFRTGRILKDTLTVRPHMGRGSFVFRADNPGRWFFHCHNVYHLEAGMAREFRYTSS
>NZ_AP019797.1|WP_161540361.1|562422_562836_-|hypothetical-protein
MSLLLTLTLLIFPLSQMGWGGLLLCIESDGVTHVETLENADCLPALPITQHMAHRDSPAAFQGHVDQKDPCFDIPLVLSIVEHRVSVPVAYVSLPVVFQTAYVSLPEPAPSLPRFEVSGHVPASPALTTLQTVVLRI
>NZ_AP019797.1|WP_161540360.1|561108_562353_-|TolC-family-protein
MRYVVYLCIWIACYALPAFAQSSPPDTLRLEQALQQALQEHPAAQTAQWRTEAAKGQIRQAGLWPNPVIEVEAEEWSSGQSPGGLFYRLSQDVLLGRKLHRQVQFARRTYEATQYEAFVVQLTVAQQLTEAYFNALVARRRMQLAEQLSGLATRLYATITSMVEAGKLSPVEQQRVRVEKSRAEAQYLEARRSYDVARSQLAAALGQPILPDVVLEDVLDTLRTPPPYDRLAEKLRAHPLLQQLEALQQAAQARERLERARRWPDIGITVGTQQLADTPKRFLTVGFTLPIPLFHRNQGAIQAARATYQATVAEWKNARIALETSLQATYSRLLATYRELQLLKQEALPAAEQAYEAIREGYQQGKFNVLDVLDSQRTFFEIEMQYVDVLARYHRTYIQLQALTGQLLPFSSSN
>NZ_AP019797.1|WP_161540359.1|559929_561093_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYPALLIVLTIAFLTGCGDEPETSPTPATEHAEEMVTLPLEVLQDYGVVLDTARAGTITVTVALPGEIKVNEDRLVHVVPRVPGIVQQAFYTVGDRVQQGARMALLESRELAELQGAYLAALERYKLARANAEREARLFRQNIASEQEYLEAQQQLAEATIELQIARQKLLALGFSQAYVDSLPQLPEEQLARYELRAPLSGIVVDRHLALGEALEANDVAFTIADLRTVWIDLSVYPRDLPRIQAGQPVTIQLGHGLPVIKTRIRFVRPILGEETRTAIARAVVRNPEGLYKPGTFVTGQIEVGSIQADIVVPKTAILYMNEQPVVFVYTGEGFKPVPVTIGLENDTLVQLTGGLRPGDVYVRKGGFVLRAELEKSEMEEGHGH
>NZ_AP019797.1|WP_161540358.1|556806_559899_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MNKLIQFTLRNRLLMLVLGALIMGAGYYSYTTLPVDAFPDVSPSLVQVFTVTEGLAPQEVEQYVTYPIEAAMNGLPDVERIRSISNFGLSVVNIYFKDGTDIYFARQLVNERLQEVRAEIPEGFGTPQLGPISTGMGLILFYYLDDTTGKYSLTELRTIQDWLIKYHLQTVPGVTEVLGIGGFEKQFHVNVDPEALLKYNLTINEIIERIEANNLNVGAQFLEKNDEEFIVRSVGLATGVNDLRNIVIKTVDGTPIYLHDVADVRIGGAIRRGVQTRNGLGEVVAGMVIKLYGSNASTVIGRVEQRLAEINKMLPEGVRIVPYYEQKTLVQAAVHTVTSALIQGILLVILVLVAFLGSWRPSVVVALSIPFSVLFATLGMKHFGISANLMSLGGLAIAIGMMVDGTIVMIENVDRLLRTADPDEPRLHVIARACMEVARPIVFAISIIVIVFLPLFTLQGVEGKTFRPLAYTTAMAMFGSLLFALLLAPTLSSLLMKRPRKERTRPPLAERILTRMMEAYRPVVTYFVHHRKKAVMLAAGLLVVGASVFPFLGSEFTPTLQEGTMVLRLTMAPSISLEAAKEMALRVERKVMQIPEVTGTVTRIGRGEVGAHTDPINSAEMYILLKPRDEWRVDTQEELEVLIRQSLGEIPGVLTNFTQPIQMTVDELLEGVRAELAIKLFGEDLQTLKEKADEIAAVVQRVRGAADVQPDQIAGKPQLRIRVDREAIARYGLNVEDVQRTVRAAIGGEEAGQIFEGVRRFDIYVRYTPEHRTTVEDVRNLLIPSPENERLRIPLEEVALIEEIVGPRQITRENNQRFITIQANVVGRDIGTFVQEAQQAIDAQVDLPPGYYVTWGGQFRLQQEANKRLMVVIPITLLLIFILLYSSFNSLKNSLLILLNIPLALVGGIVALALTGQNLSVPASVGFIALFGIALENGMVLVTYLNKLVRDGIPIDEASIEGALLRLRPVLMTALTTSLGLIPLLATGTGSEVQRPLATVVIGGLVTSTILTLLVLPALYKWFAIEPEAL
>NZ_AP019797.1|WP_161540357.1|556449_556791_-|P-II-family-nitrogen-regulator
MKAIHAYIKRHKLSAVTLALRKLDTLTGVTVIDTRGFGRGRAENEPHRIVEDLVDYVPGVKLEIVCLDELVEEVVQIIQEKAHTGLRGDGKIYIYPVEDAIRISTGERGPSAV
>NZ_AP019797.1|WP_161540367.1|571568_572057_-|DinB-family-protein
MTPWHRWLAYERYCIRPVVEALRSVPEARRLEPSYQRAVTLLGHLAVALECWLARVDGEAQSAVALFPTDLSVEEAAHRIDRALDHWEHLLSRLNAEELERTVSYRTTSGVAHRNTLADILAHLFAHGAYHRGQIMLLVRQLEGVPTQTDFIVWARTTQNPA
>NZ_AP019797.1|WP_161540368.1|572301_574851_+|hypothetical-protein
MKRSRFLKKAPWMLMLVALAVQAQAPEPVRTFVDAQGVWRRTDTGAELAFFGVNYTTPFAHAYRAHRLRRVDLRRAIEADVAHLARLRLNAFRIHVWDREISDHRGNLIENEHLDLLDYLIARLKDHGIAIILTPIAWWGTGYPEPDPKTDGFSDHYSKCELTADTTAWRIQANYLRQFIRHVNPYTGLSYRDDPDILAVELFNEPCHRTTPDTTTRYINTLVAALREAGLRKPIFYNISEGYTDAHGRAVCAADVQGITFQWYPTGLVRGRMLEGNMLPNVDRYAMPPAAFPECRNKTRMVYEFDAADVGGAYMYPAMARSFRAAGFQWATQFAYDPLFIADANTEYPTHYVNLVYTPAKAISLMIAAEAFRRLPRGVETGTYPESARFGPFRVDAARNLSEMVTDTAFFYSNTTDTRPPRPERLRHVAGVGSSPVVQYEGTGAYFLDRLADGVWRLEVYPDAYWVRDPFGRTGLHRPVARLVRRQRRMTIRLPDLGSDFSVQPLNPGNAHRPAVVAGAFGIRPGVYLLRAAGAAAVDSSWLRPVPFYLPPVAEVGLQVLHTPPVELTATDTLRVQVVADAAPDSVRLYVQRPGWRGFAAVRMVPLGGDRYGATLPPSVAQPGVLTYAVTVYIGGRAHTFPADEPRDVRDWDFAGRTFWQTALVTPEAPIVLLDPRRDADRLLLPRFGRGFRFAVEPVPTDEPGRWALRATASGPDPEAQGFVFRTELPATLRDRLARGSWTHLRVRARARQGVRRLEVALVDLDGVAWAATVTLREDWRDVRIPLHALRPVELALLPRPYPPFHPYFFRTTPRADRIDPARLDGLQFRVRAAEGALAFEVAEVALVP
>NZ_AP019797.1|WP_161540369.1|574856_576101_-|galactokinase
MPSAATESIVTRLLEAFAAHFGAPAPAVVARAPGRVNLIGDHTDYNDGFVLPMTLDRAVYLAVRPRPDRQVRLLSLNFDEAIRFEMGTPPADTPRWAAYVQGVVTELHRRALLPSGFEGVLYGDVPLGSGLSSSAALEVATLVTLQHLFGFAMSGEEAARLCQYVEHTYVGVQCGIMDQFAARLGRRGHALFLDCRSLAYRHVPVHLKDWLFVIIDSRAPRELAASRYNERRAECEAGVAFFRRFDPEIRALRDVSPELLWAHPDQPTPTIWRRCRHVVEENRRVQEAVVDLEQDRLEAFGQRMNASHDSLRDLYEVSSPALDLIVDTARQVEGVLGARLTGAGFGGCTVVLVHRDALPELEQRVARAYEATFGRQPAFYPLDHNVEAGPIWPETAALPVSSTSEGDEAGASEE
>NZ_AP019797.1|WP_161540370.1|576114_577644_-|solute:sodium-symporter-family-transporter
MTFGIVDLIAFVGFIAIVIGVSLYASRKEETGEDYFLAGRGLTWWLIGFSLIASNISTEHFVGMAGRGFELGLAIASYEWMAAVTLVIVAFFFLPKFLRAGIYTMPEYLEYRYNTTARTIMATFMMLAYVFVALATVLYSGALALEAIFGLDTVLGIWLIGLLAGFYTVYGGLKAVVWTDLLQGTALLLGGLLVTVLGFQALGGVDVFFTQAGDKLHTVLPWDHPEMPWVAVFIGGLWIPNLFYWGLNQFITQRTLGARSLEEGQKGIMLAALLKLLIPFIIVFPGIMAAILYPQEVTQADQAYPVLIRELLPVGLRGIMLAALFGAVMSSLDSMLNSAATIFTIDLYQRHWKKGQATPRELVTIGRVATAAFVLFGCLWAPIVGRTGSVFQYIQMFWGFISPGITAAFLFGLFSKRTPPEAAIGAMLLGIPVYGLLLWKLPHVAFLHHMMITFLVLAAFMWIVTKLRPLPEPPKMPDAPPIPMETSPRLRWMGLGIVGLTALLYLLFW
>NZ_AP019797.1|WP_161540371.1|577666_578722_-|UDP-glucose--hexose-1-phosphate-uridylyltransferase
MEASWLAETPHRRRNALTGEWVLVSPHRACRPWQGLVESIPAETRPAYDPTCYLCPGNARAGGRRNPPYTETFVFDNDFAALQPDAPEAHWTADELLEAHAERGICRVVCFSPRHDLTLAEMDVAAIRRVVDVWTEQYRELGERPEIRYVQIFENKGELMGCSNPHPHGQIWAQETIPNEPRKECHQQQAYFERTGRTLLADYLALELRLDQRIVCANDHFVALVPFWAVWPFETLVISRRPVPSLLELTDAERDGLADLLKRLLVRYDNLFQISFPYSAGFHQAPTDGRPHPEWHLHLHVYPPLLRSATIRKFMVGYEMLGMPQRDLTPEMAAARLRALSEVHYRMQTAF
>NZ_AP019797.1|WP_161540372.1|578981_579323_+|DMT-family-protein
MHPLWQTIGLLMLSNLFMTFAWYGHLRHLGDRPWYVAVLVSWSIALFEYMLQVPANRIGFTVLNLAQLKILQEVITLSVFVPFAVFYMNQPIRLNYLWAALCLLGAVYFIFKG
>NZ_AP019797.1|WP_161540373.1|579419_580337_+|dihydrodipicolinate-synthase-family-protein
METPGSNWQGVFPAVTTPFTEDDRVDVPGLHRLVDFLVEGGVDGLIMLGTLGEGSVLTPEEKELVLREALAAADGRVPVLAGVAETTTRAACRFAERAAALGVQGFMALPALLYNALPHETLTHFRTLARATELPLMLYNNPVLYGVDVTPEMLDELADEPHIVAVKESSEDVRRITDIRVHTGDRYRLFVGVDDLVLEGVAAGADGWVAGLTNAFPRESVALFRLAREGRLDEARRLYRWFMPLLHLDASPQLVQHIKLAQALVGVGSEHVRPPRQPLQGERRRAVEALIRKALDTHAEIEDLL
>NZ_AP019797.1|WP_161540374.1|580356_581805_+|aldehyde-dehydrogenase-family-protein
MQTKIYGHFINGEWVVGTETFPNVNPSDTRDVIGHYAQGTEADVRAAVEAAAAAFPRWAASTPQERFDVLDRVGSEILARAEELGTLLAREEGKTLKEAIGEVKRAGQIFKFFAGEALRMSGEHLRSVRPGVEIDLIREPVGVVGLITPWNFPIAIPAWKVAPALAYGNTVVLKPAEQAPASAWALAEILSRSGLPPGAFNLVLGDGSVGAALVAQPGVSAISFTGSREVGRQVAEACARRMIRVQVEMGGKNPLVVLDDAPLEAAVEAAVNGAYFSAGERCTASSRLIVTEGIYERFRAALLERIRQLQVGPALDPNTDVGPVIDEAQMQRILHYIELGKQEGAVLACGGQRLELETPGFYLAPTLFDETDNRMTINREEIFGPVAALIRVRNYEEALAVANDTEYGLSAGIFTRSLRYAHHFRRHVQAGTVMVNLPTAGLDYHIPFGGHKASGYGPKEQGRYAQEFYTVVKTCYVAPEIA
>NZ_AP019797.1|WP_161540375.1|581808_582465_+|GntR-family-transcriptional-regulator
MKVQRASLADRAYEVLEHRLVTLQLVPGTVVTEKELIQEVGVGRTPLREAVLRLAQEQLVTILPRKGIYISEINLTDQLAALEVRRELDRLMARRAARLARPQERVQFAELAQSMRKLGEEDLDLFMHLDRLFDRLVEKACHNRFAVRAAAPLHTLGRRFWYAYHHEGDLEASIQLHAHLMEQIAEGDAEAAEAAAVELVDAMIGFTQRVLQQTIEPR
>NZ_AP019797.1|WP_161540376.1|582461_584225_+|DUF885-family-protein
MKTLRWSGLVLLVGLLSACRPAPDPAAQFRALLDESWAFLLRENPLMATYVGVHTYDDRLPSVTAADLARRDSFWAQVEQRLDAIDPAQLPKNDRITYDIFRHWLTHQRAVYRYRGYLIPITSDEGFHIALGRLPEWLVLRTEADYRNYLARLKAVPTYMAQHIALMREGLRQGITQPKVVLQNYTATITGYIVEDPAQSVFFRPFREFPPGIPDSVQQQLRAEARRVIREQVIPAYRDFLQFMETEYIPGARTTTALSDLPDGRAYYEHLVRYYTTLELTPEEVHEIGRREVARIRAEMDSVMRRTGFRGSFQEFLQFLRTDPRFYARSADELLREAAWIAKQMDGRLPALFHVRTLPRQPYGVAPVPPHLQPRYTGGRYIPAPPESRTGAYYWVNPYPLNGRPLYVLEALTLHEAVPGHHLQYAIRQELTDVHPFRRWVSFSAFGEGWALYAEKLGKEVGFYADPYREFGRLTYEMWRACRLVVDTGLHALGWTRRQAIDYMVANTALSLHEITTEVDRYISWPGQALAYKMGELTILRLRREAETRLGDRFDLRDFHEVVLRQGDVPLGTLERLVHTYIEQKVE

Crispr_ID: NZ_AP019797_5

• CRISPR_ID: NZ_AP019797_5
• CRISPR_location: 612981-613121
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019797_5

Consensus_repeat	Method
GAGGCGAAACTGGAAAAGCAGATCGCCGAGGTGGAGGGTCGG	CRISPRCasFinder

spacers of NZ_AP019797_5

>5.1|613023|57|NZ_AP019797|CRISPRCasFinder
TTGAATGAACGGATCACCGAGGTGGAGAGTCGGCTGAATGAACGAATTACCTCGGTG

CRISPR arrays and Neighbor proteins around NZ_AP019797_5

CRISPR arrays

The CRISPR arrays of NZ_AP019797_5

>merge|NZ_AP019797|5|612981-613121|CRISPRCasFinder
GAGGCGAAACTGGAAAAGCAGATTGCCGAGGTGGAGGGTCGGTTGAATGAACGGATCACCGAGGTGGAGAGTCGGCTGAATGAACGAATTACCTCGGTGGAAGCGAAGCTTGAAAAGCAAATCGCTGAAGTCGAAGCGCGC

>NZ_AP019797|5|5|612981-613121|CRISPRCasFinder
GAGGCGAAACTGGAAAAGCAGATTGCCGAGGTGGAGGGTCGG	TTGAATGAACGGATCACCGAGGTGGAGAGTCGGCTGAATGAACGAATTACCTCGGTG
GAAGCGAAGCTTGAAAAGCAAATCGCTGAAGTCGAAGCGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161540392.1|605170_606352_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_AP019797.1|WP_161540401.1|628415_629321_-|KaiC-domain-containing-protein	unknown	unknown	gnl|CDD|274831
NZ_AP019797.1|WP_161540395.1|610759_611266_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540400.1|624711_627084_+|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224446
NZ_AP019797.1|WP_161540388.1|600931_601552_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_012843045.1|628041_628413_-|hypothetical-protein	unknown	unknown	gnl|CDD|163591
NZ_AP019797.1|WP_161540398.1|619099_620731_-|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223651
NZ_AP019797.1|WP_161540389.1|601570_602863_+|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl|CDD|225044
NZ_AP019797.1|WP_014066211.1|611493_611745_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161540391.1|604320_605007_-|response-regulator	unknown	unknown	gnl|CDD|223816
NZ_AP019797.1|WP_161540396.1|615594_616584_-|hypothetical-protein	unknown	unknown	gnl|CDD|225829
NZ_AP019797.1|WP_161540393.1|606355_609499_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_AP019797.1|WP_012843042.1|624156_624672_+|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|224991
NZ_AP019797.1|WP_014066210.1|611284_611539_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl|CDD|224937
NZ_AP019797.1|WP_161540390.1|602847_604317_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223715
NZ_AP019797.1|WP_161540394.1|609511_610753_+|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_AP019797.1|WP_012843044.1|627108_627978_+|xanthine-dehydrogenase-family-protein-subunit-M	unknown	unknown	gnl|CDD|224238
NZ_AP019797.1|WP_174238064.1|613257_615594_+|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319849
NZ_AP019797.1|WP_161540397.1|616831_618862_+|alkaline-phosphatase	unknown	unknown	gnl|CDD|224699
NZ_AP019797.1|WP_161540399.1|620827_623773_+|glycosyl-hydrolase-115-family-protein	unknown	unknown	gnl|CDD|379757

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161540392.1|605170_606352_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.65009e-34
NZ_AP019797.1|WP_161540401.1|628415_629321_-|KaiC-domain-containing-protein	gnl|CDD|274831	TIGR03878, thermo_KaiC_2, KaiC domain protein, AF_0795 family. This KaiC domain-containing protein family occurs sporadically across a broad taxonomic range (Euryarchaeota, Aquificae, Dictyoglomi, Epsilonproteobacteria, and Firmicutes), but exclusively in thermophiles.	1.40005e-163
NZ_AP019797.1|WP_161540400.1|624711_627084_+|molybdopterin-dependent-oxidoreductase	gnl|CDD|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	0
NZ_AP019797.1|WP_012843045.1|628041_628413_-|hypothetical-protein	gnl|CDD|163591	TIGR03879, Uncharacterized_protein_MJ1053, probable regulatory domain. This model describes a common domain shared by two different families of proteins, each of which occurs regularly next to its corresponding partner family, a probable regulatory with homology to KaiC. By implication, this protein family likely is also involved in sensory transduction and/or regulation.	8.3654e-14
NZ_AP019797.1|WP_161540398.1|619099_620731_-|FAD-dependent-oxidoreductase	gnl|CDD|223651	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	8.4047e-165
NZ_AP019797.1|WP_161540389.1|601570_602863_+|PQQ-dependent-sugar-dehydrogenase	gnl|CDD|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	8.12951e-43
NZ_AP019797.1|WP_161540399.1|620827_623773_+|glycosyl-hydrolase-115-family-protein	gnl|CDD|379757	pfam15979, Glyco_hydro_115, Glycosyl hydrolase family 115. Glyco_hydro_115 is a family of glycoside hydrolases likely to have the activity of xylan a-1,2-glucuronidase, EC:3.2.1.131, or a-(4-O-methyl)-glucuronidase EC:3.2.1.-.	0
NZ_AP019797.1|WP_161540391.1|604320_605007_-|response-regulator	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.9669e-85
NZ_AP019797.1|WP_161540396.1|615594_616584_-|hypothetical-protein	gnl|CDD|225829	COG3292, COG3292, Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms].	6.16516e-07
NZ_AP019797.1|WP_161540393.1|606355_609499_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019797.1|WP_012843042.1|624156_624672_+|(2Fe-2S)-binding-protein	gnl|CDD|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	2.13064e-83
NZ_AP019797.1|WP_014066210.1|611284_611539_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl|CDD|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	6.26337e-20
NZ_AP019797.1|WP_161540390.1|602847_604317_-|HAMP-domain-containing-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	7.82718e-58
NZ_AP019797.1|WP_161540394.1|609511_610753_+|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.66374e-36
NZ_AP019797.1|WP_012843044.1|627108_627978_+|xanthine-dehydrogenase-family-protein-subunit-M	gnl|CDD|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.99844e-86
NZ_AP019797.1|WP_174238064.1|613257_615594_+|cadmium-translocating-P-type-ATPase	gnl|CDD|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_AP019797.1|WP_161540397.1|616831_618862_+|alkaline-phosphatase	gnl|CDD|224699	COG1785, PhoA, Alkaline phosphatase [Inorganic ion transport and metabolism].	6.18375e-84

Protein sequences

>NZ_AP019797.1|WP_014066211.1|611493_611745_-|hypothetical-protein
MPSEKARIQFITDQRGRRIRAVLPLKRYRELLEAEEELEAIRAYDQARASEDEAIPFEQALREIEAQRQCRTKSSSFEAPRKR
>NZ_AP019797.1|WP_014066210.1|611284_611539_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MPYEVFILRSAQKALADLPERDYQRVCRAIRALRDNPRPPGSKKLTGREGWRLRIGAYRVIYEIDDAQRRVTILAIGHRRDIYR
>NZ_AP019797.1|WP_161540395.1|610759_611266_+|hypothetical-protein
MNAAHLHLLTNHLPLFAVLLGLLVGLYGAWRREESVVRVALMLFVLGALGAVAAYFSGHGAEEIVEELGRSHDAIEAHEETGNLAAYLTIALGVLSLGTLLRRGPVAPAWRTALFVLALVVLGVVGYAANLGGRISHPEITGAALQETTRSPVPGPEAAEEAEEPHED
>NZ_AP019797.1|WP_161540394.1|609511_610753_+|TolC-family-protein
MLGLLLGLSLLLGNPNVAPAPDTLGIQEALALALRHHPQLQALRARQEALQGRRLQAYGIETPQLYFFREGIGSGQAFAEQRWTLVERIDFPLVTYYRLQANGLESRALTAELEATTARIRADVKRAYTDVLYAQELVHLRQEEVALLEQLREAVQARVAAGLATDLEVARTEIQLADAQSRLETARRDFLQARYELFRAVGLDPEAQRYDIVFPDTLAYVTVEIPQEAVLARLDQLPELHSQQAQLQAARVNIRQARASLLPQLQLDVYPQDYGSGYRFVGFQIGISLPLGFLPGYRGRVREARALYEMRRWELEDLRLQLKKQAEQAWHGYETARIVVERYARQIRDRSRTLLHRLQRGYRLGEVSLIELLDAQRLVLESEQRYYEALRDYYHQLIELERFLGHELTFTNP
>NZ_AP019797.1|WP_161540393.1|606355_609499_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MLHRLIDFSLRQRFVALSLVALMAFGGIVALERIPINSLPDVTPVQVLIITKAGRYSPYDVEQLVSFPIETAMTGLPRVKEVRSISQFGLSAVTVEFEEGTDIYFARQLVAQRLQDVRDQLPPDVSSPQLGPISTALGEIYQYVVRGDGYSLTELREIQDWIIAPQLRAVPGVTEVNSFGGFVKQYEVIVDPEQLRALRLSLRDIIDAIERNNSVSGGNYLEHNQEQYIIRGFGQIRSTDDLERIIVARRGERPIYLRDVATVRLGRQIRQGAVTQDGKGEVVTGIVMMLRGENGREVIRRVEEKIREINPRLPPGVRIEKFYDQSDLIARTTGTIKENLLEGGFLVIAVLLLLLGEIKGALIVASVIPLSMLFAFIGMRAFGLAANLMSLGAIDFGMIVDGSVVMVEHMVHRLEADRSGRSRLALLRQAAHEVARPIFFGVLIILMVYVPIATFRGMEGILYRPMAITVASAVFGSLLLALVYVPAIATLVFRRGVRVRRNYLMDWLRPRYRRFLEKSLERRKTTLAVALLVFGAALALLPFLGTEFLPELDEGSILIEEVRMPSVTLETSVENANWLAGQLIRHIPEIQTVVPKTGRSDLANDWMGVHQTDVWIILKPREQWRPGMTKEKIIEQIRPFLETEPGLAYNFTQPIAMRVDELTSGVKSDIAVKLYGENLDTLAAVAARIARLLPDLPGTDNFYVEKFAGQPYVNIEIDREAIAAFGLNVEDVQQVIEAGLGGAPAGQVFEGQRRFDIVVRFPEAYRNNFEAIMEAPVTLPGGGTIPLRRVAHIRAEEGPREIARENGWRRLVVGINIKGIDIGTYVSNLQRAIETQVKLPPGVFLEYGGTFENQQRAMRHLYVAVPLALLIIIGLLYLMFGEMRYPLMILSVLPLALAGGVFALWLRGMYLSISAAVGFIALFGVAVLNGVVMIAHLNALRRQGLSVREAVLQGATDRLRPVLMTALVASLGFVPMAFNTGPGSEVQRPLATVVIGGLITATLLTLRVLPTIYDWLERDDRPPRGPEPEWEEDGQMAASVSAATAQT
>NZ_AP019797.1|WP_161540392.1|605170_606352_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSRITLTILVLLGLSACRRAPIEALLPEAIGVPPSLQADSASAKYRMVRLDSAQQRRLQVQVVPVRHERATYTVSIPGEVYPAPGLMAQVSTPIEGRVAHLNVHEGEPVRRGQVLLELESLAFAELISDFLQAQAEEAYLARQVARLRQLVTEQLTPQSTLDQTEADYLRAQARRQAAEVRLRALGVTPEVARALGQQERPLLPLRAPIDGYVDQHQVELGQAVSANQTLMTIVDPSRVHIRGFLAPDDALGLQPGDSVRLVLQVPDSLTLGARVHTINPALDPENRAVVVNILASTHQGWPRPGQNVRLWIRLRTPRPVYVVPLAALTYDGQQAIVFVQQAPDTYEVRPVTVWRTDAAQALLLDGVREGERVVVHPVFSLKALMRYSEFAEE
>NZ_AP019797.1|WP_161540391.1|604320_605007_-|response-regulator
MPRPILLVEDEIAMAALLRQGLEEEGYTVEWVLTGEEALARLEHLEPALLVLDVRLPGMDGVEVCRQVRQRWPDLPVLMLTALDDVENRVRGLRAGADDYLSKPFAFEELLARIEALLRRSKRQPTRHLLRDGPLTLDLNARTATCGERPLSLTPREFDLLAYLMQHPRRAISRLQIYREVWGHDFDHGTSLLEVYISYLRRKLQEAGCPGYIATVRGVGYRYEPAEG
>NZ_AP019797.1|WP_161540390.1|602847_604317_-|HAMP-domain-containing-protein
MPPSSRHPSFLNRLLVQSGGTLIAALALLGLLAWLAAYGWINELARLPLRNEIQLVASRIVRDDHLDVDAYYWDEPHHRLLERHVDPYFLQVFDARGHLIRQSTNIRLLSDRYPEVLLHAPVQQEPFWKPLQTFQVGEYRLYYLVFPLHDPAGRYLGAIQLARFEPGFVALYRQLALGLFVSWVLLSGLILTLLAVSGRRVLRPLHELTRATAALSPESLHEPIRLTSPLDRETAQLLATLNALLHRLHRAFDELRRFTANAAHELKTPLAILHGQAELALRRPRSTDSYRTTLRQILDQTEQMTRLVQHLLLLSRLDQPEAAFPFAPVDFSELAAREQELFATRARTRGVTLTASLAPDARLYGVETLLQEVVRNVLDNAVKYTPQGQIDVVVRATGNHILFEVRDTGIGIPHEALPHVTERFYRAPQTAPGIEGHGLGLALVARIVALHQGTLEITSEPGQGTTVRIALPALSVTASEPTPMAQLPR
>NZ_AP019797.1|WP_161540389.1|601570_602863_+|PQQ-dependent-sugar-dehydrogenase
MKSSRKIVAQWLLVLLLAGCNGINSRPVQQSLACDPDNGGITLPEGFCALVVADNVGRARHIVVRDNGDIYVALMRLQNGHGIAALRDTSGDGRADIVAYFGDVPGTGIDIRDGYLYFAPDTALLRYRLVEGELLPQEPPELVVGGLPERGQHAAKTFAFDEAGYVYINIGAPSNACQSRDRQRGVPGMDPCPLLERYGGIWRFRTDVLGQRQDDGLRYATGIRNAVAIAWNPFADALYVVQHGRDQLDTLWPEYFDAEDNANLPAEEFFRVDEGDDFGWPYCYYDPIQNKKVLAPEYGGDGQTVGRCDQFEDPIVAYPAHWAPNDLIFYDGTQFPERYRGGAFIAFHGSWNRAPLPQAGYNVVFQPMNADGTPAGDWEVFADGFAGTDQIRSTGDAKHRPMGLAVGPDGSLYISDSVRGRIWRVIYRGS
>NZ_AP019797.1|WP_161540388.1|600931_601552_-|hypothetical-protein
MSIRRAPIYKTVLKIALLAAVVVLNWQCRTLRAWQALRQVDFYIDRVSDVNLAGVELDHVRSYEDLTLEQTLRISQALARGTLPLRFRLHLIAENPADNPVTARLERLEWTLLLDDHPTLSGTLDQTYRLPPGEPQEIPLDFELDLLDFFEKNLQDLVELALALAGTEGVTKRVSLEARPFIETPLGPLSYPRPIRILTREVGRTS
>NZ_AP019797.1|WP_174238064.1|613257_615594_+|cadmium-translocating-P-type-ATPase
MTDEAQDRACAELVEQSAAEADGLVQVEVDPTSGRLTLTYDRARLSPADAERLARRLVAAFEERPAHCTLHVQGQGGRSCETCALALERRLRALPGVRQARVSFRGGVLHVVYDATRTSPEELARVVERFGVRTLPPKPEVSWRLWLEGTRREALFVALTLAGLATGWLAGRLGAPLVAAVAYGVAYVFGGWDGLRNGIDALRHRTVDVDLLMVLAALGALVIGAPAEGATLLFLFSLSNLLQHYAIGRSRRAIQALMELRPDRARVLREGQEVEVPVEEVRVGEIFVLRPGDRVPLDGVIVRGESALDESSITGESMPVDKGPGQEVFAGTINTTGSLEVRVTRPASASTLARMIELVEQAQSEKAVTQRLIDRLEQPYALGVLAMTALAIVIPVVFLNEPFARAFYRAMTLMVAASPCAVVISTPAAVLSAIAAGARRGVLFKGGVYVEALARVRAIAFDKTGTLTEGRTRLVQVGVRKAAGLSEDELLRLAAAVQQRSEHHLARATVAAARERGLTMPEAEGFQAVVGKGVRAVVEGATVHVGNLRYFEAVWQAADGFDEGRAAVETLARQGQTAVLVARERDGRREILGWLAFADRLRPGAAETIRRLRELGVVHVALLTGDNRHVAEAIGREAGVDAVHAELLPAQKVAHVKALVDRYGAAAMVGDGVNDAPALAAATVGIAMGGAGTDVALETADVVLMRDDLGQLPYVLALSRATRRTLLVNFAIAFGMMGLMIGAILLQGLPLPLAVVGHEGSTVLVSLNGLRLLRFRAS
>NZ_AP019797.1|WP_161540396.1|615594_616584_-|hypothetical-protein
MTPRALLWMVLLVVAGCRTTQPVTVTLPASLPEPPTVLLPWHDGWLLGGGTVLWWLRDERPIHRWTLPAAVQGGVVDPEGVLWLGTGAGLVRLVAPTAQPERVPLPALNRFPSVTALTLDAQQRLWVATEQHGVFLRADTSWRPVLAAAPVYALATTTDGTVWVGTGIGLFRQTSDGWLVYSEEGTANHGLPDNIVERLVALPEGLWVIMSEAVSFFPVDEVDHPVEFAYLGHPGNRIHDVVDLPESGYLLTTDDGLVWLRELPHFDTHGGLRELRVMEYDLARPLSSERLDLPDEPITRLDRRGNWLYLAGPSGLFRRLLPPAALAHR
>NZ_AP019797.1|WP_161540397.1|616831_618862_+|alkaline-phosphatase
MRRALQWALMLLLCLPASLTAQTRKHVILYIGDGHGIAPRTATRMALGQGRPGSRFSDEPNFHLLAQDRLRYNAMVTTHSLNSWITDSAPGASVYAVGKRGKIDNEFISLDPETFEPLETILEAAKKAGYAVGLVTTTRVTHATPAAFAAHIWNRDLEDYIAAQYLSASQEEYEAIFNAGPGYDPARDWVLPEPKVGVEIDVILGGGARHFLPRNNPDVNGNATVRDRNGQPITDGNGQPVVLSGRRSDNVDLIEIAKDRGYVYVNSRDALLGILDRLDEFSPENDAKLLGLFSSSHRSYEAERQQLYPWEPALWEMTMVAIEVLKRKSDKGFFLVVEGGRIDHLEHANAGGIGYEGDRYTVVADVEAIIADDVYGGGTDRLAGVYGSDYMIKEVLDFDYAIEEGLNFMNDATAGQTLILSTSDHECGGFTVVGLHDAEDAQGNGTLIRTYARQPEKTDGQFTPVPENIDRGDDEIGGWFPEYELVEFQGKLWPEPAGPNARRIVIAYGSNPLVNGNGGTIGTTPGNHTPQDVWVGADDNVDGAFASRITGRGLLDNTDLFPIMRDFLGVTTTSNERLPDEKRSGLGAVEAYPNPFGEKLAVTLAIDRPQTVSLEVYNALGQRVRVLQSSARLTPGTHTITWDGRDDTGAGVASGLYLVVARSGEQVVSRQVVRIR
>NZ_AP019797.1|WP_161540398.1|619099_620731_-|FAD-dependent-oxidoreductase
MQPLLHREAFLERLRKQEQWDVLIIGGGATGLGVALDAAARGFRTVLFEQHDFGKGTSSRSTKLIHGGVRYLREGDLGLVREALRERARLRHNAPHLVWPRLFVVPCYRWWERPLYGIGLWLYDRLAGKGRLGRTRRLDAVETHALLPTLRRNHLRGGLAYPDGQFDDARLLVHLAWTAAEHGAVVLNYMPVEALMGTRSRLEGVVVRDLESGERFEVRGRVIVNATGVFADTVRRMDNPNATPLIIPSQGVHLVLPRRFLPGEAALLIPRTDDGRVLFVIPWHGQVLLGTTDEPVPDPELEPLPTEEEITYLLTHAGRYLEPAPTRTDIRAVFAGLRPLVQRGGMQEDTAHLSREHVILVSRRGLVTVTGGKWTTYRLMAEETVDRALQVAGLPHRTSPTATLRLHGATRHVNVADPWHVYGTDARHLRRLMEAEPELAAPLHPRLPYRMVEVVWAARYEMARSVEDVLARRTRALFLDAAAALEAAPAVAHRLAAELGRDNTWVNAQLRDFVALVRRYVPDLHAHDPNDASPSEQTAPRRD
>NZ_AP019797.1|WP_161540399.1|620827_623773_+|glycosyl-hydrolase-115-family-protein
MLSQMRALLLLLTGLLLIESAPAQPLSSYVQDACPDDCFALAENGRVVSIVASRADDPVVLRAIEDLVADLERVTGRRPVVHYDTWPAEPSLVVGSLAHSPLIRELVETGQLAPGEIEGRWEAFLLQVVPDVRGADRLVIAGSDPRGTVFGIYDLSRAMGVSPWYWWTDVPVPHRSALYVARTLRRTDYPRVRYRGIFINDEAPALSGWAYEKFGGFNHRFYARVFELILRLKGNYLWPAMWGRSFFEEDSLNIPTAVRYGIVIGTSHHEPMLRAHVEWQWHGKGPWDYTKNAATLQAFWREGIRRMKHNEAIVTVGMRGDGDEPMSEETAIELLERIIRDQRRILAEETGRDPSEIPQAWTIYKEVQDYYEKGMRVPEDITIVFTDDNWGNVRLLPPPGSPPRKGGYGMYYHFDYVGAPRSYKWINTVQIERTWEQMRLTYRHGVDRLWVVNVGDIKPMELPLTFFMDMAWDPERFTAADLPRYYERWAAEQFGPRYAAEIATLLATYTKYNARRKPELLDADTYSLHHYREFDRVVADYRALAARAQALHERMPAAYRDAFYQLVAYPVMASANLYEMYHALALNRLYARQRRAATNRMAEKVRRLFARDAELAAYYNHVMGGGRWNHMMDQPRIGYTSWDDPDENIMPEVETIAVPDTALPAVAVEGQPEAWPGPDAPATLPVFDDLTRPVHYLEVFNRGRQPFRFRIQAESPGLVFSSTEGEVTEQQRIQVTVDWAKVPPGAAQLVFYVEGPGMRVPVVAPLERIVDRIPPDFEGFVARDGHLAIEAHHFSRQVPAGEARWEVIPNLGRTASAVTPLPVTMRAQAPGADSPRLEYDVLLPAPGRIRVHLYLTPTYNFVNRPGGLRLAVSLDDAPPQLVEVHAADTIPDWRYGRVWMDAVARNVRIVTSVHEITRPGPHTLKLWAVDGGVVVERIVIDTGGLRPSYLGPPESPFVRNRRTHWPPEPEAGSAHAARATR
>NZ_AP019797.1|WP_012843042.1|624156_624672_+|(2Fe-2S)-binding-protein
MRHTIQVTVNGQTHRVEVEPRLLLVELIRDVLGLTGTHVGCDTSQCGACTVHVNGEAVKSCTMFAVQADGCEITTIEGLARDGALHPLQEGFWQEHGLQCGFCTPGIIMAAADLLRRNPDPSEEEIRHALEGNFCRCTGYHNIVRAIQYAAARMRGEAVVPRGEAASTGAS
>NZ_AP019797.1|WP_161540400.1|624711_627084_+|molybdopterin-dependent-oxidoreductase
MEARGYIGAPIRRVEDRRFVTGRGRYTDDIVLPGMLYAWIVRSPHAHARIRAIRTEKARQHPGVVAVFTGKDLLDDGVGSLPTGWQIGPDMKEPPHYALAVDKVRYVGDGVAVVIAETKAAARDAAELVEVDYEELPAVVDAAEALKEGAPLVHDDAPGNLCYVWELGDREATDRALATAHHVTKLEFVNQRLIPNAIEPRSAIGHYDPGRDELTLYTSSQNPHLIRLLLSAFVLKIPEHKVRVISPDVGGGFGSKIFHYPEEVICAWSSRKLGRPVKWTAVRSESFVSDAHGRDHVTTAEMGFDRDGRIVGLRVRTIANLGAYLSTFAPGVPTWLYGTLLAGQYKTPHIHVEVKGVFTNTTPVDAYRGAGRPEATYVVERLVELGAHELGIDPAELRRRNFIQPDEFPYQTPVVLQYDSGNYEGALNKALEMADYWKLREEQKRAREQGRLIGIGLSCYIEACGLAPSKVAGAIGVRAGLYESAAIRVMPTGKVQVFTGTHSHGQGHETTFAQIVAHELGIPLEDVEVIHGDTAEIPFGMGTYGSRSLATGGSAIYRALEKIKAKARKIAAHKLEVAEEDLEFRNGQFIVKGTDRAIGFGDIALTAYVPHDYPEGLEPGLEENAFYDPANFTFPFGTHLSVVEIDPETGRVKLLRYIAVDDVGRIINPMIVEGQIHGGVAQGVGQALLEGAVYDRSSGQLLTGSLLDYALPRADDLPSFEVGHQETPCPHNPLGAKGAGEAGTIAATACVVNAVVDALYHLGVRDIRMPLTPERVWRAMRGLPTDGHAS
>NZ_AP019797.1|WP_012843044.1|627108_627978_+|xanthine-dehydrogenase-family-protein-subunit-M
MIPQTFAYRKAHTIDEALALLREHGDEAKVLAGGHSLIPLMKLRLSTPELLVDIGGIRELTEIRERDGRLELGALVTHRTIEFSELLRQKCPVLPEAAAQIGDPQVRNKGTIGGSLAHADPAADYPAVVLALDAEIEATGPDGRRTIPARDFFQGLFTTALRPGELLTRVRVPVMPPRSGAAYLKFPNPASRYAVVGVAAFVKLAPDDTCAEVRIGITGAAAAAFRATEAEKRLVGKTIDERTLAASLEDMVDPDDLLSDLAASAEYRAHLCHVLARRALRQAFERARG
>NZ_AP019797.1|WP_012843045.1|628041_628413_-|hypothetical-protein
MPVEVTPQPVDLDQRALQVFLKAIELAGGPRGLLERKRLTWLPSLMEAAYAVVLEAEHHRSVDEIARFLGLSTAATRNLLRASTEAVRERLEQEEPSERNVHIAGGLARLAYEALQREAARAG
>NZ_AP019797.1|WP_161540401.1|628415_629321_-|KaiC-domain-containing-protein
MAGAVSREAGPLVEAIVSLRHAAAAAPPLEGVPTGVEGLDELFFTTEWREGRPVRKPLGGIPRYAVLQVTGVADTGKSLLVEQFAVAQARREQVCLFLTTESPAPFVAMGLRTRAAAMGADWNAIEDRIVLVDAATHTILTQDLPTLFNTLAHAIKTYHVRAVVIDSITGLYEAREMLARDVVRPIFTFLKKWHQTALLVSQKRSGHELLTAEAAGGYAVGHILDGTLVLAKQPITSAQQARLYRVPIGETVRLFRIDGCRLCGHDTSTHLLEITPTGLVRIGPSLQTFHQEASVEPNYQT

Crispr_ID: NZ_AP019797_6

• CRISPR_ID: NZ_AP019797_6
• CRISPR_location: 1674348-1675986
• CRISPR_type: TypeI-B
• Repeat_type: NA
• Spacer_info: 24 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csm5gr7

Consensus repeat of NZ_AP019797_6

Consensus_repeat	Method
GTTTGTAGCCTACCTATGAGGGATTGAAAT	PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRT

spacers of NZ_AP019797_6

>6.1|1674378|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
>6.2|1674444|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
>6.3|1674511|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
>6.4|1674578|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
>6.5|1674646|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
>6.6|1674712|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
>6.7|1674780|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
>6.8|1674848|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
>6.9|1674916|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
>6.10|1674983|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
>6.11|1675051|35|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
>6.12|1675116|40|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
>6.13|1675186|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
>6.14|1675253|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
>6.15|1675319|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
>6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
>6.17|1675452|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
>6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
>6.19|1675585|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
>6.20|1675652|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
>6.21|1675719|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
>6.22|1675786|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
>6.23|1675853|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
>6.24|1675920|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG

CRISPR arrays and Neighbor proteins around NZ_AP019797_6

CRISPR arrays

The CRISPR arrays of NZ_AP019797_6

>merge|NZ_AP019797|6|1674348-1675986|PILER-CR,CRISPRCasFinder,CRT
GTTTGTAGCCTACCTATGAGGGATTGAAATCAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGGGTTTGTAGCCTACCTATGAGGGATTGAAATATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGATGTTTGTAGCCTACCTATGAGGGATTGAAATCGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAAGTTTGTAGCCTACCTATGAGGGATTGAAATTCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCGGTTTGTAGCCTACCTATGAGGGATTGAAATTCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCCGTTTGTAGCCTACCTATGAGGGATTGAAATAGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGCGTTTGTAGCCTACCTATGAGGGATTGAAATACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTCGTTTGTAGCCTACCTATGAGGGATTGAAATTGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCCGTTTGTAGCCTACCTATGAGGGATTGAAATATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGAGTTTGTAGCCTACCTATGAGGGATTGAAATTCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGGGTTTGTAGCCTACCTATGAGGGATTGAAATGACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTGGTTTGTAGCCTACCTATGAGGGATTGAAATAATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCGGTTTGTAGCCTACCTATGAGGGATTGAAATTTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGAGTTTGTAGCCTACCTATGAGGGATTGAAATTGCGAAGCACGGCGGCAATGACGCCACTCGCCACATGTTTGTAGCCTACCTATGAGGGATTGAAATACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAACGTTTGTAGCCTACCTATGAGGGATTGAAATTAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGAGTTTGTAGCCTACCTATGAGGGATTGAAATGCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTACGTTTGTAGCCTACCTATGAGGGATTGAAATAGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAGGTTTGTAGCCTACCTATGAGGGATTGAAATACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGGGTTTGTAGCCTACCTATGAGGGATTGAAATCGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTTGTTTGTAGCCTACCTATGAGGGATTGAAATTGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGGGTTTGTAGCCTACCTATGAGGGATTGAAATCGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTCGTTTGTAGCCTACCTATGAGGGATTGAAATCCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCAGTTTGTAGCCTACCTATGAGGGATTGAAATCCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAGGTTTGTAGCCTACCTATGAGGGATTGAAATA

>NZ_AP019797|6|4|1674348-1675985|PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019797|6|6|1674348-1675986|CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAATA

>NZ_AP019797|6|3|1674348-1675985|CRT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CAAAACCGATATCAAAGTTTTCACGGAGGTTGTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCAGGAAGTTCGTCTACAATCTCATAGTTTCCGGAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGATTTCTCCGTTCACGTCAATGAGCATTGAATAAAA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCTGGATGGAAGGTGAGAAAGCCTATAAGCGGCTTCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGCGTCGGTGCCGATGCGCCGAGCGCCGAGGTGCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCCAGGTTCGGATCGCAGTAGATCACGCCGCGCGC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGTGGCCGTCGAAGCCAAGCGCCAGGACGCGCCGGTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGATGCACGCGACGGACGCACAGCAGGCGGATGCCC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCGTCTTTTCCGTGGAGGCGGACGCCGATCAGGCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCACGCCTTCGCCGCGTCATGGAGCCTCCTGCGCGCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACGCAGACGGCTCAGGCTCTTCGCCTTCCGCCTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AATGGTAGCCTTTCCGGAAAAGCCATACTCCGTCCACCCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TTCAACCTGGTGGTAATATCGGACGGTCTTAAGTAGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGCGAAGCACGGCGGCAATGACGCCACTCGCCACAT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGAAGGTCAGATGCGCCTCGTCGGCGCTCGAGAAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TAGTAGAAGGAGAGCGGGCCGCTGGCCCCGCGCTTGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GCTACGGCCACATGGTTCGGCCCCACGAGCAGTTTAC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	AGCGCAAACGGTCCGCGCGCCGCCGTGCGCGCGCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ACGCCTATGCCAGGGATGCTGGCTACGAGAGCTTTGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGCTTGATCCGTTCGCGAATGCGCTTACGGGTAGCTT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TGGAAGATAAAGGCGGCCACCAGCGAGCGTTTTTCGG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CGTAGAAAACGTCCGTGTCGACGTCTTCCAGCGATTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCCGGCCAGAGCGTGCCGTGCTCCAGCCGCTCA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGGTCTTCGGATGGACCTGGCGGTAGCTCCGCCAG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl|CDD|378190
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl|CDD|274217
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541072.1|1664918_1665251_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl|CDD|131641
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	unknown	unknown	gnl|CDD|235847
NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	unknown	unknown	gnl|CDD|379138
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|274695
NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl|CDD|273848
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl|CDD|238657

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	4.7e-92	304.2	0.0
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	1.8e-34	114.1	0.0
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	2.1e-86	284.5	0.0
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	4.5e-45	148.4	0.0
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	5.6e-35	115.9	0.0
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	3.6e-46	152.5	0.0
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	7e-133	437.4	3.6
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.1e-27	89.4	1.3
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	6.8e-36	119.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	gnl|CDD|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	gnl|CDD|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.30443e-99
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl|CDD|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	7.82699e-86
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	6.87395e-28
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22529e-41
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5867e-27
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.0578e-32
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.31956e-64
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	gnl|CDD|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.19076e-40
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	6.34046e-162
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29

Protein sequences

>NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2
MYVIMVYDVSVKRVARVLQIGRKYLTWVQNSVMEGALTQTQYQRLKQEVLKVIDKNEDSVLFYTLRSEHDLRKEILGIIKGAPSDIV
>NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MRKRLYVVSSGRLRRRQNTLVLVGEQGNRYFPIEQIEEIHVFGEVDLNKRLLEFLTRQHILLHFYNYRGYYVGTYYPREHYNSGYMILRQAEHYMDEAKRLDLARRFVKGALFNLYKVVRYYRNRGKPLEDIELSLVQHRSRLDDIRDIAALMQAEGQARNAYYAAFDKILEKPDFAFEQRSRRPPRNRINALISFGNSLLYTAVLSEIYRTHLDPRIGFLHATNFRRFTLNLDVAEVFKPALVDRVIFTLVSKDQIKASDFNEELNGLYLNDRGRRVFLEAWEKRLKSTFYHRGLKRNITYRRAIRLELYKLEKHFMDEKAYIPFRLRW
>NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4
MPDRITGTLVWYAMICEREVWLMAHELEPDRDDARLEWGRFLGQMSYPRSRKREINLPGMKLDIVERHGARIVVGEIKSSSRFVEATRMQMLFYLWRLRESGVEAEGELRFPQERRRMRIVLDASAEADLLRVIERVRAIMQQPFPPPAKRITYCRSCAYREFCWSDDPEE
>NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'
MASGLYSHPGIPLEDHSNRVLALARKLLDETAPAWWKDARLRLLLEMAIALHDFGKATSFFQVALEGKRRTDAFSRHARLSALFFLHRATTWLGEDAEIHWLPLLFAYLVVLRHHTNLKSVADELHPPDEKEMDVLKCQIQAIPVQNVNAYLQALDVPDCIRAVLIFSPEAFLAWLREDAPTLLRGWRKQWRCWKQKAQNAEAYWAFLMGFSVLLDADKLEAGARGLLPRREDIPPNAVALYKERVFGPSSVGSLNEMREKAYQEVLAAPLSPDKHLYTLTLPTGMGKTLTGMAAALKLRALVHEKTGYAPRIIYALPFLSIIDQNADTLEQVLAVALGLTGGISASVAFSDHCASETRSDSPVESRLLIKHHHLADVQYRLQAHDGVEELDYATSRLLTEGWHSEIIITTFVQLFDTLLAWRNASARRVNRLHRAILLLDEVQALPALYWPLVRNLLIELAERLGVYVVLMTATQPYLLEDACELVPDPSAYFKSLDRLDVYIRLEPRRLEDFVADFKPEPDKSYLFMVNTIAAAQKLHRLLEETLNEKVAFLSTGVTPGERRKRIRDLKKGRYRFAVSTQLLEAGVDVDFDVVYRDMAPLDSLVQAAGRCNRNLRAGRRGQFHIVYWIDDRDRSYAHWIYDPVLLARTQTHLEKHTHLREPEFLNLLQDYFRDVWETGIPRDVADALWEAVCTLRFDGEKDKACVLKAKEAPGAHLSQFCLIEQQPYKRDVFVQLDERAEAVWSEAKKILLDLRRDHDVWKARERFARIRSCFYQYVISVALKPETAPYWDEDLRIYVVQREVLEHYYDAVIGFKRESEGDAMFA
>NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5
MKVVAFDLWSDYGHFRRFFTTSSPLTYSFPPPTAVRGIVGAILGKGRDEYLLATSGLAIGVRVLTAVKRVRWGQNFIFTKGTSGQFDPTLLAQRKGNAQGMVRTQVKYEYLRAPRFRLYVGGNSALLEELEALLREHRTHYTVSMGLSELLADFSYVGTYGATALPPGTYELVSVFPVEILDPERGLENVLRSGVKLAKERAPVYLAPDRTPLLYQDVVLEMGGQPVRVTVSEKVYRLDNGDVVYLWPPVSTLIPASR
>NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSTLQNRHEILFLYDVSWANPNGDPMDENKPRIDEETGVNIVTDVRLKRTVRDALMELGYEVFLREERGEDGSRRTKEDIMIYYESDPRKVLEQCIDIRLFGGTFALKGDDQNAFSLTGPVQFKFGRSLHRVKVELIKGTSIMPSAADKRQGTFTEVYVVPYSFIVFYGIANEKAAAATQLTEEDLEAMFKALWVGHKAGTDVITRSKFGHEPRLLVDIVYKPGTLTHMGELDKLVAFRSEKNDEAIRDISDGMLDLSGLVEKMAAYKDKIEKVRLRMDGRLRLVPDVNAALEVPVEPFTWSKEI
>NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein
MLYALRTLGEILGGARLHDPVVADRVITLEFDAGGRYLGTSLHQFSAKDVPRYLYKKAKGSNPPTLTPTLLLNRKEIQKSLKNARNAYRKLRKLNRDLPELELLTKEGETLRKMEKGIVCALKNIPEKERVLFTVRIDGQWMGEREDFRSTLRSKFREEGRESAVDGVCAVCGEKTEISGDISPFKFYTIDKPGYVVGGFDKARAYRAFPLCYECRDLIRRGRQHAEENLSFDLAPNIRYLIIPDFILGADVVRQEVLAILTDEREQRQKRLHTLSRREIRRITEDEEEILELLSQEKDVMTFHFLFMSRQQGRETIDLYIQDVYPSRLRALLEAKAAVDRSMRVPREDGTWLEYNFTYATLHRFFSRSDPNRRNSDLLRHLYDLVDQTFRAVPVSTDYLMPFLMLQIRHDVVTPDRRDQGLYRFTILDALAVLLFIWWTTKMEVPMTVPSPTTLEEFLDGLPVLDSELKKGLFLLGALTERLLRVQGKERGSAPFWKVLKGLKMTEADLRGLLPRVRNKLQEYDRFRAGETALFQKAADYLAQTATPWKMSVDELNFYFALGMGLFPRVAQFVYPKKEEVEL
>NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6
MRVDLYLCPAGGRQKVALPVHYNVLLQGVVYSSLNEALARRVHDHGWQVGGRRLKLFTFSRLRGDFRCRSGRLIFYGKIAWTIASPEEEILESLVVHLLRAKVLQIGQAKLELLSVEVPVPPSYRRPICLRALSPITVYSTFETSDGRKKTYYYTPREPEFGRLVLENLRRKIRAWMGEDIPLDGATFRPVRVSNRNLVVARYKDTIIKGWTGIYELDAPESYFRMALDAGLGAKNSQGFGCVEVWAPTKSVSLKEVEAGKR
>NZ_AP019797.1|WP_161541072.1|1664918_1665251_+|hypothetical-protein
MFALEELQEQIAGELLTYAKEILRNHEEMTGVPLGDAEEMYEVLVQNEYPGLLARNAVRARDVDEFIELLEKDPDLIRAAEAAQNAVFYELEDYDRDTMRLVLVLALSLV
>NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSSLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV

Crispr_ID: NZ_AP019797_7

• CRISPR_ID: NZ_AP019797_7
• CRISPR_location: 1676860-1677293
• CRISPR_type: TypeI-B
• Repeat_type: NA
• Spacer_info: 6 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,cas8b1,cas6,csm5gr7

Consensus repeat of NZ_AP019797_7

Consensus_repeat	Method
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRISPRCasFinder
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CRT
GTTTGTAGCCTACCTATGAGGGATTGAAAT	PILER-CR

spacers of NZ_AP019797_7

>7.1|1676890|35|NZ_AP019797|CRISPRCasFinder,CRT
ACATGTACCTGCGCGGAATATCGGTTACGGAGATC
>7.2|1676955|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
>7.3|1677022|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
>7.4|1677088|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
>7.5|1677156|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
>7.6|1677225|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG

CRISPR arrays and Neighbor proteins around NZ_AP019797_7

CRISPR arrays

The CRISPR arrays of NZ_AP019797_7

>merge|NZ_AP019797|7|1676860-1677293|CRISPRCasFinder,CRT,PILER-CR
ACTTCTAGCCTACCTATGAGGGATTGAAATACATGTACCTGCGCGGAATATCGGTTACGGAGATCGTTTGTAGCCTACCTATGAGGGATTGAAATCCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGAGTTTGTAGCCTACCTATGAGGGATTGAAATATCTGACAATATCCAGCAGGCGTCCATACGTAAACCGTTTGTAGCCTACCTATGAGGGATTGAAATTCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTCGTTTGTAGCCTACCTATGAGGGATTGAAATGACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCGGTTTGTAGCCTACCTATGAGGGATTGAAATGAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTGGTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019797|7|7|1676860-1677293|CRISPRCasFinder
ACTTCTAGCCTACCTATGAGGGATTGAAAT	ACATGTACCTGCGCGGAATATCGGTTACGGAGATC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019797|7|4|1676860-1677293|CRT
ACTTCTAGCCTACCTATGAGGGATTGAAAT	ACATGTACCTGCGCGGAATATCGGTTACGGAGATC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

>NZ_AP019797|7|5|1676925-1677293|PILER-CR
GTTTGTAGCCTACCTATGAGGGATTGAAAT	CCGAGCACGCGGCCGCATTCCCAGCAGCGGATTTCGA
GTTTGTAGCCTACCTATGAGGGATTGAAAT	ATCTGACAATATCCAGCAGGCGTCCATACGTAAACC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	TCGTAGAAGACGTCCGCGTCGACGTCCTCCACCGACTC
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GACTGAGAAAACAGCTCTTGCGCCTGGGCCTCGAGATCG
GTTTGTAGCCTACCTATGAGGGATTGAAAT	GAGCGGTATCGTGATGAGCTGGCCAGGGGTGCGCGGTTG
GTTTGTAGCCTACCTATGAGGGATTGAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	gnl|CDD|378190
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	gnl|CDD|274217
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|350688
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541072.1|1664918_1665251_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl|CDD|131641
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	unknown	unknown	gnl|CDD|235847
NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	unknown	unknown	gnl|CDD|379138
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|274695
NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl|CDD|273848
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl|CDD|238657

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	cas8b1	cd09730_cas8b1_CAS-I-B	4.7e-92	304.2	0.0
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	1.8e-34	114.1	0.0
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	cas7	cd09690_cas7_CAS-I-B	2.1e-86	284.5	0.0
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	4.5e-45	148.4	0.0
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	5.6e-35	115.9	0.0
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	3.6e-46	152.5	0.0
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	7e-133	437.4	3.6
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.1e-27	89.4	1.3
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	6.8e-36	119.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	gnl|CDD|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein	gnl|CDD|378190	pfam09484, Cas_TM1802, CRISPR-associated protein TM1802 (cas_TM1802). Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This minor cas protein is found in at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.	1.30443e-99
NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2	gnl|CDD|274217	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI. This model represents one of two closely related CRISPR-associated proteins that belong to the larger family of TIGR01595. Members are the Csh2 protein of the Hmari subtype of CRISPR/cas system. CRISPR stands for Clustered Regularly Interspaced Short Palindromic Repeats. The related model is TIGR02589, the Csd3 protein of the Dvulg CRISPR subtype.	7.82699e-86
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	6.87395e-28
NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|350688	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3. CRISPR-associated (Cas) 3 is a nuclease-helicase responsible for degradation of dsDNA. The two enzymatic units of Cas3, a histidine-aspartate (HD) nuclease and a Superfamily 2 (SF2) helicase, may be expressed from separate genes as Cas3' (SF2 helicase) and Cas3'' (HD nuclease) or may be fused as a single HD-SF2 polypeptide. The nucleolytic activity of most Cas3 enzymes is transition metal ion-dependent. Cas3 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.22529e-41
NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.5867e-27
NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	1.0578e-32
NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	5.31956e-64
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	gnl|CDD|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6	gnl|CDD|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	4.19076e-40
NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	6.34046e-162
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29

Protein sequences

>NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019797.1|WP_161541080.1|1673540_1673804_-|CRISPR-associated-endonuclease-Cas2
MYVIMVYDVSVKRVARVLQIGRKYLTWVQNSVMEGALTQTQYQRLKQEVLKVIDKNEDSVLFYTLRSEHDLRKEILGIIKGAPSDIV
>NZ_AP019797.1|WP_161541079.1|1672536_1673529_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MRKRLYVVSSGRLRRRQNTLVLVGEQGNRYFPIEQIEEIHVFGEVDLNKRLLEFLTRQHILLHFYNYRGYYVGTYYPREHYNSGYMILRQAEHYMDEAKRLDLARRFVKGALFNLYKVVRYYRNRGKPLEDIELSLVQHRSRLDDIRDIAALMQAEGQARNAYYAAFDKILEKPDFAFEQRSRRPPRNRINALISFGNSLLYTAVLSEIYRTHLDPRIGFLHATNFRRFTLNLDVAEVFKPALVDRVIFTLVSKDQIKASDFNEELNGLYLNDRGRRVFLEAWEKRLKSTFYHRGLKRNITYRRAIRLELYKLEKHFMDEKAYIPFRLRW
>NZ_AP019797.1|WP_161541078.1|1672019_1672535_+|CRISPR-associated-protein-Cas4
MPDRITGTLVWYAMICEREVWLMAHELEPDRDDARLEWGRFLGQMSYPRSRKREINLPGMKLDIVERHGARIVVGEIKSSSRFVEATRMQMLFYLWRLRESGVEAEGELRFPQERRRMRIVLDASAEADLLRVIERVRAIMQQPFPPPAKRITYCRSCAYREFCWSDDPEE
>NZ_AP019797.1|WP_161541077.1|1669510_1671994_+|CRISPR-associated-helicase-Cas3'
MASGLYSHPGIPLEDHSNRVLALARKLLDETAPAWWKDARLRLLLEMAIALHDFGKATSFFQVALEGKRRTDAFSRHARLSALFFLHRATTWLGEDAEIHWLPLLFAYLVVLRHHTNLKSVADELHPPDEKEMDVLKCQIQAIPVQNVNAYLQALDVPDCIRAVLIFSPEAFLAWLREDAPTLLRGWRKQWRCWKQKAQNAEAYWAFLMGFSVLLDADKLEAGARGLLPRREDIPPNAVALYKERVFGPSSVGSLNEMREKAYQEVLAAPLSPDKHLYTLTLPTGMGKTLTGMAAALKLRALVHEKTGYAPRIIYALPFLSIIDQNADTLEQVLAVALGLTGGISASVAFSDHCASETRSDSPVESRLLIKHHHLADVQYRLQAHDGVEELDYATSRLLTEGWHSEIIITTFVQLFDTLLAWRNASARRVNRLHRAILLLDEVQALPALYWPLVRNLLIELAERLGVYVVLMTATQPYLLEDACELVPDPSAYFKSLDRLDVYIRLEPRRLEDFVADFKPEPDKSYLFMVNTIAAAQKLHRLLEETLNEKVAFLSTGVTPGERRKRIRDLKKGRYRFAVSTQLLEAGVDVDFDVVYRDMAPLDSLVQAAGRCNRNLRAGRRGQFHIVYWIDDRDRSYAHWIYDPVLLARTQTHLEKHTHLREPEFLNLLQDYFRDVWETGIPRDVADALWEAVCTLRFDGEKDKACVLKAKEAPGAHLSQFCLIEQQPYKRDVFVQLDERAEAVWSEAKKILLDLRRDHDVWKARERFARIRSCFYQYVISVALKPETAPYWDEDLRIYVVQREVLEHYYDAVIGFKRESEGDAMFA
>NZ_AP019797.1|WP_161541076.1|1668773_1669550_+|type-I-B-CRISPR-associated-protein-Cas5
MKVVAFDLWSDYGHFRRFFTTSSPLTYSFPPPTAVRGIVGAILGKGRDEYLLATSGLAIGVRVLTAVKRVRWGQNFIFTKGTSGQFDPTLLAQRKGNAQGMVRTQVKYEYLRAPRFRLYVGGNSALLEELEALLREHRTHYTVSMGLSELLADFSYVGTYGATALPPGTYELVSVFPVEILDPERGLENVLRSGVKLAKERAPVYLAPDRTPLLYQDVVLEMGGQPVRVTVSEKVYRLDNGDVVYLWPPVSTLIPASR
>NZ_AP019797.1|WP_161541075.1|1667859_1668777_+|type-I-B-CRISPR-associated-protein-Cas7/Csh2
MSTLQNRHEILFLYDVSWANPNGDPMDENKPRIDEETGVNIVTDVRLKRTVRDALMELGYEVFLREERGEDGSRRTKEDIMIYYESDPRKVLEQCIDIRLFGGTFALKGDDQNAFSLTGPVQFKFGRSLHRVKVELIKGTSIMPSAADKRQGTFTEVYVVPYSFIVFYGIANEKAAAATQLTEEDLEAMFKALWVGHKAGTDVITRSKFGHEPRLLVDIVYKPGTLTHMGELDKLVAFRSEKNDEAIRDISDGMLDLSGLVEKMAAYKDKIEKVRLRMDGRLRLVPDVNAALEVPVEPFTWSKEI
>NZ_AP019797.1|WP_161541074.1|1666111_1667863_+|TIGR02556-family-CRISPR-associated-protein
MLYALRTLGEILGGARLHDPVVADRVITLEFDAGGRYLGTSLHQFSAKDVPRYLYKKAKGSNPPTLTPTLLLNRKEIQKSLKNARNAYRKLRKLNRDLPELELLTKEGETLRKMEKGIVCALKNIPEKERVLFTVRIDGQWMGEREDFRSTLRSKFREEGRESAVDGVCAVCGEKTEISGDISPFKFYTIDKPGYVVGGFDKARAYRAFPLCYECRDLIRRGRQHAEENLSFDLAPNIRYLIIPDFILGADVVRQEVLAILTDEREQRQKRLHTLSRREIRRITEDEEEILELLSQEKDVMTFHFLFMSRQQGRETIDLYIQDVYPSRLRALLEAKAAVDRSMRVPREDGTWLEYNFTYATLHRFFSRSDPNRRNSDLLRHLYDLVDQTFRAVPVSTDYLMPFLMLQIRHDVVTPDRRDQGLYRFTILDALAVLLFIWWTTKMEVPMTVPSPTTLEEFLDGLPVLDSELKKGLFLLGALTERLLRVQGKERGSAPFWKVLKGLKMTEADLRGLLPRVRNKLQEYDRFRAGETALFQKAADYLAQTATPWKMSVDELNFYFALGMGLFPRVAQFVYPKKEEVEL
>NZ_AP019797.1|WP_161541073.1|1665276_1666065_+|CRISPR-associated-endoribonuclease-Cas6
MRVDLYLCPAGGRQKVALPVHYNVLLQGVVYSSLNEALARRVHDHGWQVGGRRLKLFTFSRLRGDFRCRSGRLIFYGKIAWTIASPEEEILESLVVHLLRAKVLQIGQAKLELLSVEVPVPPSYRRPICLRALSPITVYSTFETSDGRKKTYYYTPREPEFGRLVLENLRRKIRAWMGEDIPLDGATFRPVRVSNRNLVVARYKDTIIKGWTGIYELDAPESYFRMALDAGLGAKNSQGFGCVEVWAPTKSVSLKEVEAGKR
>NZ_AP019797.1|WP_161541072.1|1664918_1665251_+|hypothetical-protein
MFALEELQEQIAGELLTYAKEILRNHEEMTGVPLGDAEEMYEVLVQNEYPGLLARNAVRARDVDEFIELLEKDPDLIRAAEAAQNAVFYELEDYDRDTMRLVLVLALSLV
>NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSSLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV

Crispr_ID: NZ_AP019797_8

• CRISPR_ID: NZ_AP019797_8
• CRISPR_location: 1698838-1699493
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 8 spacers
• Cas_protein_info: csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,csx1

Consensus repeat of NZ_AP019797_8

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	CRT

spacers of NZ_AP019797_8

>8.1|1698875|42|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
>8.2|1698954|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
>8.3|1699027|39|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
>8.4|1699103|43|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
>8.5|1699183|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
>8.6|1699256|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
>8.7|1699330|36|NZ_AP019797|CRISPRCasFinder,CRT
TTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGT
>8.8|1699403|54|NZ_AP019797|CRISPRCasFinder,CRT
GCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCG

CRISPR arrays and Neighbor proteins around NZ_AP019797_8

CRISPR arrays

The CRISPR arrays of NZ_AP019797_8

>merge|NZ_AP019797|8|1698838-1699493|PILER-CR,CRISPRCasFinder,CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTGAAGACGGTGAAAGAAATATTTATGGCGCATTACCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACAAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAAGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACATAAGAACTTGCCCTACAACATTGTGAGGGAGACAGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACAAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGCGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACTTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGTGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGACGCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCGGTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

>NZ_AP019797|8|6|1698838-1699329|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

>NZ_AP019797|8|8|1698838-1699493|CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

>NZ_AP019797|8|5|1698838-1699493|CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCTTTTTGAACGGCGGCGGGCTGTTGAACATATCTTTAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGAAGACGGTGAAAGAAATATTTATGGCGCATTACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TGGATAGTCTTATCGTTCACGACAGCGTCGATCCAGACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAATCGTCCATTTTCGTTTTGAGCGGTTCCGATCCTATCCAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	ATAAGAACTTGCCCTACAACATTGTGAGGGAGACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	AAAGAGCGTCGGCTTTTGAGCTGGGAGGCCTACAAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	TTCATTGACCCGGTAGAACTTGGCGTCCATGGCTGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC	GCAGTACGAAAACAAAACGGCCCGCTTGCTTAGCGAGATGCTCGCCTACATTCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTCTTCAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	unknown	unknown	gnl|CDD|235847
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl|CDD|133475
NZ_AP019797.1|WP_161541094.1|1711002_1711821_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein	unknown	unknown	gnl|CDD|379423
NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	csx1	cd09741_csx1_CAS-III	gnl|CDD|187872
NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein	unknown	unknown	gnl|CDD|275056
NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
NZ_AP019797.1|WP_161542394.1|1708159_1709188_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|187794
NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	unknown	unknown	gnl|CDD|379138
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl|CDD|238657
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	csx1	cd09741_csx1_CAS-III	9.7e-37	121.3	0.2
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	9.6e-43	141.4	0.0
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	2e-72	238.1	0.0
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	3.1e-27	90.1	0.1
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	5.6e-35	115.9	0.0
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	2.1e-87	288.9	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	gnl|CDD|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase	gnl|CDD|133475	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls. PGRPs have been divided into three classes: short PGRPs (PGRP-S), that are small (20 kDa) extracellular proteins; intermediate PGRPs (PGRP-I) that are 40-45 kDa and are predicted to be transmembrane proteins; and long PGRPs (PGRP-L), up to 90 kDa, which may be either intracellular or transmembrane. Several structures of PGRPs are known in insects and mammals, some bound with substrates like Muramyl Tripeptide (MTP) or Tracheal Cytotoxin (TCT). The substrate binding site is conserved in PGRP-LCx, PGRP-LE, and PGRP-Ialpha proteins. This family includes Zn-dependent N-Acetylmuramoyl-L-alanine Amidase, EC:3.5.1.28. This enzyme cleaves the amide bond between N-acetylmuramoyl and L-amino acids, preferentially D-lactyl-L-Ala, in bacterial cell walls. The structure for the bacteriophage T7 lysozyme shows that two of the conserved histidines and a cysteine are zinc binding residues. Site-directed mutagenesis of T7 lysozyme indicates that two conserved residues, a Tyr and a Lys, are important for amidase activity.	5.2367e-29
NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein	gnl|CDD|379423	pfam14020, DUF4236, Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	3.43875e-06
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	8.70038e-29
NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein	gnl|CDD|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000296693
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	7.0755e-30
NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase	gnl|CDD|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	3.21521e-59
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	9.38593e-30
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.45553e-85
NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	2.02984e-09
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	6.87395e-28
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.27033e-89

Protein sequences

>NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019797.1|WP_161541085.1|1686466_1688095_-|N-acetylmuramoyl-L-alanine-amidase
MAMRMPRRLLLLALLVLVPVARAQQRSDVVERPVRIQTPALKKEGGHTVWEARSDTLPGPFTGIILRGTTRPGATLRGWIRLGDRDDWHELTILRQQRSAIFWAGYRSDSLLHAPFFRVRFEGEGAGVLQIIEAGTFNHLDDSLQGALKWHIVPGRPSGHIRAPHLIRRSEWGARPFVGTPTPQPYYDYETFHHTAGFAPRTYEEGIQEVRNIQQFHQDVRGWSDIGYHFLLDLEGRIYQGRPFADESIPFDQGPPLVIGAHVGGHNTGNIGVAIMGCFHPPEGSHCIDQLTPAARDSLVLLLAYLIDTYGIDPLHIRGHREWPSASTACPGDNNMALLPAIREEVAELLKRGTTQPAELVAEVSVDADGVVRLRWNVVTLRNASRLAIVRQAGVRADTIYQTTELASGEFADVTAPTSAQLVYQFVVFSDTGYPFVLAEDTVQLPHYADWLRVAVFPSPFVEEARLRYYLRTTAWVEADLFDVLGRPVRRLIRGYVTSGWHGVSFALRGAATGMYYVRFRASLIGNREFVRVIPVVYVGGL
>NZ_AP019797.1|WP_161541084.1|1680939_1686210_-|T9SS-type-A-sorting-domain-containing-protein
MRRSLPVLFFWAALGRLLWAQTYDSTVVTVRAGCYPEVVFPGETFAFRFDYRASSAVDTVYIPQDFDWSPLEVVGYRYIEMVEDGSKSLQVILRVPDTPDNWSRDMVIGKQPPVRWRLKSGEEREEEQFCSTLVHTRYIYYTSPEGGLVYEDRSAGSWHLINRGVRDNTVLPIARGSGYLIFGLEPGLVRFSLWPWGDGIFKVWVEGPLYLYHINPSMDTKDFSLVTWQVSYFKDSEYFRIDPVDTFTTNSVPYHTGDYERYLDNAWRLLVIPRPEAPNESRGKIVAAFYREGVELFRRELNFYVYGDFLKNNVFLTPIFKDTSGSFYTWGDDWSNRPTVQEICSGYTIVSNICPSPSIAGPDTAVYSFLYSNTGSLSIISNYAHDGFVNLSVSSSFSYIRKLIWEYKGKTKNKRPDINEILEELEEKLKEEEEENEREDNTKIFYTSVIGDATDETENYYAVFNQNARVVFELGERYNSNFLSDTLHPIYALRNSYFLGQFNYTKKIIGYPGFVIQCTIKPSDCNVIGTYGLEPVILNGTYKSENNPSGSLAVDGYDDRDIVFFHNYFNELFYSPHVITTIFNFPSKSSQLSPEDTTSPPLIDIRLLANPSVQRLQDLAGSLNDRRPFEFIVQVYQNGQPLANTPLTVEGPFADDEIPSTDALLLLNEPQQTNAFGIYSFFWIPPSKNWFEGKSMPYGFRFRVRVGDTWEDATVQVSNLIIQGQLVQRHAGAKLRQDPDRDGLLPLANVEVSLEPDFPPDRTVRTDANGHFELGVPEVGSYQVYARRREFWPDNFPKWSRTQGRVFVTESGPVPDTLLLFLAELPVGPMLQRWIPEITFDMESVRDSLQHLRVIPEIVGFLSEIARQDSTGALDEEAVRRLQQAVFATYDLFQGAHDLADCGKTAIWEGSLGILFEVVKLIVEKIKLLEKISQSIRSKLPADWKQSSDPKIRQLGRTLEALEGIKIRLVNILERIQAWAQKSSNDLLEGMRHAIINGDFASFNTMYFLRGRIFEPLAELIKRVTDLAKKTKLDEFSREFVFSQAMEQSGLNRLLNSLSDTIKEILLRGQLDDLRAVVATTLQEEVELARQRQFSAYPLSFYHARRASNGWLELMRQERTRLLGRCEGLLGLNEMANAAMDAIKAAMLGLSVATSGALTPAAVAVDRLSTAVGLVLKAAMILTGLEVMSAIHPKGNYGRPGIAAVRQAFSLKAPALAVRVHSPVRLMVVDTQGRRTGADATGQFYNEIPGAGYWPASDSLEETILLPADIGPFRVIVHGSGSGTYALELLQLDSLGEETVLRRWTGEVSPLDRWQLVVESPEEAVASATLQSLPEATDLFVMLAGQRRDSVRVGLGLSVTLEAVATYGDTTLTLPATNVQWSVSDTIAAVAETERPGQASVVGLHPGSTTLTVQAEAFTRRIVLDVAGLEGAISLSRRSLTASDTVSVQVRVRAHGVARPEQIAVEVRTPTTRYWLPVMPDENGVATVAWRMPDSLSGYSGPGQMALVGVVEGDTITLASVPFVLVASDVEVPEVLEAEATEDGVVVARVQLPRSVLAAALQPEVLLSVVDSLPAALPSGFTAIGPAIGWSFWDQAQATAVAPTSAYRMQLWSGAYQGRPKALYWDGTAWEALEVEAASGFWEATLESAGGVILLARPEQVVAVEKAELPEQVRLEVYPNPFGGRVQIRIGIPRSGLVRLTLYDVLGREVARLFEGEQTAGWHTQSWDASDLASGLYLLVLEGEGFRTTKTMVKVQ
>NZ_AP019797.1|WP_161542391.1|1680021_1680912_-|serine-hydrolase
MRWLFLVLAAGLLPWALAFQTEPFGRIEHRYELTLGVAAYNLTTGASVFYRADTLFPTASVIKLAVLVELYRQYEQGYLSPQDTVVLTAGRIYPGSGVLQHLSVPRVLSLQDAAVLMIILSDNTATNLVFDRLGPHHDARLDSVNATLRSLGLQRTRMLNKPFGFSTRKNTPEARRYGIGMGTPRELMQLMIAMARDRVVSAEASREMIEILKRQQWTEMAPRLLPVEADTLQVAHKTGAISTARCDVGLIFSPRDTIAFAVMTDHIKDPRWSVDQVGNLAVAEAARLVYERLHVR
>NZ_AP019797.1|WP_161541083.1|1679113_1679764_-|hypothetical-protein
MVRVFWADPRKPTPSQLEVLRELLEEDVELVKAERPFVSAEEIAAHFRKSGCEELVVDWNAPARVLAHLVEQGIHPLIAEMQEVPLEQADFVENGRGYRFDYFYRLEDVRLLLRRVRRGEALCGSIALPLLARIDIQGDQSLYIVFSKEDLDGLMLDAGCEVVDFMHIPIAHAGMLIDLIDRGLLEGGYCLLYPEKVEQVRAVGRAALTKREGSSE
>NZ_AP019797.1|WP_161541082.1|1678033_1678285_+|hypothetical-protein
MTRKTHAFAKKPTSWDALVWLCLFDHNWMRLHRVLRERVAGLPGERRYRPGTSARAIGLAEHVWSWEEFLTFRHYQKEWLPGL
>NZ_AP019797.1|WP_161541081.1|1673854_1674121_-|hypothetical-protein
MLEVYADPLGRKENSNIDFRVTMGIFMIVGTNALTMANDLPPTRNNEKGQLMQDHRRSAACFLLLLQQREGENLAAKQLKALKVALVA
>NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSSLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV
>NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MTLQAIYLYPRASFRTPLRSDTLWGLLVVALRVVAGDREADDFIAACEAGQPPVRLSSAFPFVEVSRGDGAPVIRHFFPRPVLPPPPLLEPSRADARTVFEQMKQGKKLRQIRWLPQELFERVLQGELDEAGLQQALQQSGEQKQWPVILTQDNLHTSIDRLTGTTRMENDAGQLFYSHEYYLKRGHGLFFLCEGDVERIAPALRYLHHVGWGGDSSVGKGHFDWALRRLELQVPAKPTHRLLLSLYSPNPEELAHIRRHRDQTFYQLERRQGYAGAHRLPGSAYRKKPLYMFAEGSLMPDPGHPLRGTVHTVMESAGIQVRHSGLALDLPAYLRSS
>NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAGFLGNIVLKGKMECLTGLHIGGSKEKFEIGGVDQPVIRDPATNYPYVPGSSLKGKMRSLLAFALGKAHEDPNFRSFDPDCPLQRVFGTSAEARNIGPSRLIVRDAFPDEETIQMWENLDTELLYTEIKAENGIDRLTSAANPRFPERVVRGSRFNVEFVFGVYEVRDADYFRYIIDGLRLLEHSWLGRSGTRGYGQVKFKLAEPIIVTLNDYLNGGEAYRRANLPHEELTFDLETASFDEGRFESIKQAFRQVAEKLATNQA
>NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2
MDIPKDLAELEPEAIDRLAHDMGRKYAEKEIKTAQVRNVFAHINRMRTRLRRNRSVSPEIIKRDLVMLKPRLAYAGGRQEKVRPMSEDLRQVVNAVLNSQSFEKALQNFFDLVEGIVAYHKFYGGKDN
>NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1
MDQGQIAYLSGLLHAVGVLEQLGPQTFRSPAEASLHFTDQVLEACPAFGPHAGAIREAVRAAAEALPAARPSSWLESLLQQVRLPGHPEPAAGRVYPPRPLSEGTVYPVAPEEVGDGREACRNLWQELQAETTRALRGIQDVEAALETLYTLLEKYTAYVPAPDAGARGISLFDYSRVTAALHLCRARAGSEPAVLLVKGDVSGIQSFIYRELRGDATENPAQLLRGRSFFVALLTRTVVRHLQRQFRLPDGCVLYSSGGHFLLLIPNTEAAPQQLDEADRQINQALFEELRGAIQLVQASVPVSIEEVERRPHEALRQLEEALQMAKLRKGWNVLDTLVGQPIEEANQTPKLHRVGQALPYTHYLVEVPGLAANQAPDGVRCALELRGFAVTWLFVEEDRIEAIVGQLGTRRGTVFNIRTPRIPNLPGAMQVGRRFLPAGVYVPMLADDSRPLMFEELAAIESENYPLLGFLRMDVDNLGALFVVGLHAAFGNQPFGLHRTAALSRELDRFFGGQVNALARGHDVYLVYAGGDDLFAVGSWIRVLRFARSIREKLREYCAGNPSVTISAGLSIHKEHFPITVAAETAGEEEDRAKAAGKNRISVFETPVTWERLSVLLDELGEPLLLAVSDETLPDEDRLPRTFLHTLLRYSREVLDEEGRIDLAALARFNHLLHYTFARRGVHARVLETDTQEGESPKMRLARGFLLEGPDRSEWFRTFVIPAAYVLLKTRKQRN
>NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase
MSVARRQGPVLMATLGEQPQVVTLTLDLLAAQRMEVEELVVFHTAAHYPALRRSLELLDAELRQWPAYRSLTVRRVLLRDEAGRELTDVRTEQEARQVFRILFREVLEVKRQRRPLHFLIAGGRKVMAAYGMAVVQLLGEAGDQVWHLISEGELLASGRMHPEPGDRVHLVPVPFVRWSALPPAATRLAVTGDPFEAMRLHEAWLDEESRRQRAWFLLHELTPAERTLLVALARTGASNSELARMLKRSPKTVANQLATVADKYRAFAGLAEGVPLSRAELVAHFAPVLDRIGEPCREESLQTFG
>NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein
MPLHLYRTFRLGPVRLTISHRGIGLSIGTRGLRIGRTPSGRPYIRLGRGRWRLEKRLPERP
>NZ_AP019797.1|WP_161542394.1|1708159_1709188_+|hypothetical-protein
MRHPATEASTEAPSSILTEAPDWIADDGLLRDEGVIVGRALGTDPLSENNGPHFWKLETIRAYYDERRAPLKAQLEAIRRQLTRLQHREAELREELVRHERALAALAEVETRLPLTGRNLLLAAILTVVCALTPFVVAELLPSERFEHPLAVAMALSLLGLFALFQGRSLLVAADARLSGAPMRPERWKLYAMELLPPLAVALLVAALAHRSEEGWLPTLVIGFALLLLLLIPGRLLMSLLARTLPELSGWWRMASHRWRLRRHHRRAAAALRRDLEKLTRLRMQLEDETIPLLERKLAFLDARCRRKEALFRSEMELARQRNLLRARYESNGQQHSPEISL
>NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein
MLQIFRRKSHPEASSPADNILMLPVGAEEPDPNRPHLYGQYDGGLAVENDAFAEFLQAASRREHLAERITALLEQRHQIQEQLRQAEAAHISAQTLPERLQALERALPEARQRHEQLRQQREACEKELETLHQSHEAYSLVQMLMYGTAGLAFLLGDIIVSKEIVAQVLYLPLEYERWLFAVGLACITFVLKVAYDRLVELPFWQRVQKRFEVVILSISTLALITLIFMGALRTQEIQRQHMLRSTEQTTWSLEADAPSIQQEIPGPDGTVLLVTFMLAAVMFATAGAVCFSTAHTHARGYFHRYRPLRQKCARLSDQEREAALRLETLEENLTRGREELARATATLALVGTPEVLRQDLQKLEDRIAQLQDQLADLLVAQRQASYRSGRERALHYQRLLASQSSKEETDELPDASSEQEEHEEAADALPEATAAQEMSEKEADALIEMLTAQDNQEDATSTLPEVSVAQNDREDLHEAEAATDELPGERSESREATPESLPGEHEAAQPVALTVAHSDAAPEDSEAFQTGSNGAASPMPIGSSVTSDVEGESAAVGGDGAERSTERRSRRERGVRHGLRRPFLDIRDEILDLTA
>NZ_AP019797.1|WP_161541094.1|1711002_1711821_+|hypothetical-protein
MRWFCLFFLIATLGCSSEAQRDPLTACADENLAHESLTGIPRTALVFIDRSSSVTASPDTRRAFEAALRQQVEAILPVRGGTIQVFFVHSRTTGKADARTFVQDAPLPRVSPYDSEQRQACRQYVSEVQYRMRAARDSLLRLLDEQVTTSVTEATDLWGIFEVISETLPASNEMPPATVLVLSDLLECMPGPERRCFESRPPTSRAQAEAWAREDAERIQRSYRIRPEVLRQAHYVLISGDFANREESRYVRYYWFALLEAFGVPYEQISIQ

Crispr_ID: NZ_AP019797_9

• CRISPR_ID: NZ_AP019797_9
• CRISPR_location: 1706967-1707562
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 7 spacers
• Cas_protein_info: csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,Cas14u_CAS-V,csx20

Consensus repeat of NZ_AP019797_9

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

spacers of NZ_AP019797_9

>9.1|1707004|46|NZ_AP019797|CRISPRCasFinder,CRT
ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
>9.2|1707087|46|NZ_AP019797|CRISPRCasFinder,CRT
ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
>9.3|1707170|46|NZ_AP019797|CRISPRCasFinder,CRT
ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
>9.4|1707253|37|NZ_AP019797|CRISPRCasFinder,CRT
CACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGA
>9.5|1707327|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
>9.6|1707404|43|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
>9.7|1707484|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATTACCGATTTGCGTTTTGTCAACGAGGCTTTCATGTTGGTG

CRISPR arrays and Neighbor proteins around NZ_AP019797_9

CRISPR arrays

The CRISPR arrays of NZ_AP019797_9

>merge|NZ_AP019797|9|1706967-1707562|CRISPRCasFinder,CRT,PILER-CR
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACATTACCGATTTGCGTTTTGTCAACGAGGCTTTCATGTTGGTGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|9|9|1706967-1707562|CRISPRCasFinder
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ATTACCGATTTGCGTTTTGTCAACGAGGCTTTCATGTTGGTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|9|6|1706967-1707562|CRT
TTTGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGGTTCGGCGGTGCAGGTCTTCCGGTTTGCGGGAACGGCGAAGTA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACAAGACCGGAGGCGGCCATCATGCAGGCACTCCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ATTACCGATTTGCGTTTTGTCAACGAGGCTTTCATGTTGGTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|9|7|1707290-1707562|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCACAAAACAATGGAGGTGTTATGCAGTACATCGTAACCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGAAAGTGAGCATCACGCCGAACTCACGGAGCGCCGCATCCCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ATTACCGATTTGCGTTTTGTCAACGAGGCTTTCATGTTGGTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	unknown	unknown	gnl|CDD|235847
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	csx1	cd09741_csx1_CAS-III	gnl|CDD|187872
NZ_AP019797.1|WP_161541094.1|1711002_1711821_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein	unknown	unknown	gnl|CDD|379423
NZ_AP019797.1|WP_161541095.1|1711824_1712673_+|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl|CDD|378186
NZ_AP019797.1|WP_161541096.1|1712723_1713872_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14u_CAS-V	-	gnl|CDD|223747
NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	gnl|CDD|187817
NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein	unknown	unknown	gnl|CDD|275056
NZ_AP019797.1|WP_161542394.1|1708159_1709188_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541098.1|1714763_1715162_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541097.1|1714258_1714651_+|CRISPR-associated-protein	csx20	cls000118_csx20_CAS-I:CAS-III	unknown
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	gnl|CDD|187794
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	gnl|CDD|187815
NZ_AP019797.1|WP_161541099.1|1715165_1715531_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	gnl|CDD|367635
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	gnl|CDD|187793
NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	unknown	unknown	gnl|CDD|238657
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	gnl|CDD|187811

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	9.2e-43	141.3	0.0
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	csx1	cd09741_csx1_CAS-III	9.7e-37	121.3	0.2
NZ_AP019797.1|WP_161541096.1|1712723_1713872_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14u_CAS-V	-	1.1e-44	148.0	13.8
NZ_AP019797.1|WP_161541097.1|1714258_1714651_+|CRISPR-associated-protein	csx20	cls000118_csx20_CAS-I:CAS-III	1.7e-65	213.9	0.0
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	csm4gr5	mkCas0089_csm4gr5_CAS-III-A:CAS-III-D	9.6e-43	141.4	0.0
NZ_AP019797.1|WP_161541095.1|1711824_1712673_+|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	1.5e-63	209.9	0.0
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	csm3gr7	cd09684_csm3gr7_CAS-III-A:CAS-III-D	2e-72	238.1	0.0
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	cas10	cd09680_cas10_CAS-III	2.1e-87	288.9	0.0
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	csm5gr7	cd09662_csm5gr7_CAS-III-A	5.6e-35	115.9	0.0
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	csm2gr11	pfam03750_csm2gr11_CAS-III-A	3.1e-27	90.1	0.1

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein	gnl|CDD|235847	PRK06655, flgD, flagellar hook assembly protein FlgD.	2.27734e-07
NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase	gnl|CDD|187872	cd09741, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	8.70038e-29
NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein	gnl|CDD|379423	pfam14020, DUF4236, Protein of unknown function (DUF4236). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 69 and 402 amino acids in length.	3.43875e-06
NZ_AP019797.1|WP_161541095.1|1711824_1712673_+|TIGR02221-family-CRISPR-associated-protein	gnl|CDD|378186	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. The family describes Cas proteins of about 400 residues that include the motif [VIL]-D-x-[ST]-H-[GS]. The CRISPR and associated proteins are thought to be involved in the evolution of host resistance. The exact molecular function of this family is currently unknown.	4.66477e-76
NZ_AP019797.1|WP_161541096.1|1712723_1713872_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl|CDD|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.0653e-35
NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2	gnl|CDD|367635	pfam03750, Csm2_III-A, Csm2 Type III-A. Clusters of short DNA repeats with non-homologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-associated) proteins. This entry represents Csm2 Type III-A, a family of Cas proteins also known as TM1810/Csm2.	7.0755e-30
NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein	gnl|CDD|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000296693
NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4	gnl|CDD|187794	cd09663, Csm4_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm4. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	9.38593e-30
NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3	gnl|CDD|187815	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	1.45553e-85
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	gnl|CDD|187817	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.42628e-39
NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5	gnl|CDD|187793	cd09662, Csm5_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein.	6.87395e-28
NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein	gnl|CDD|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	5.73812e-29
NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1	gnl|CDD|187811	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; signature gene for type III; also known as Csm1 family.	1.27033e-89

Protein sequences

>NZ_AP019797.1|WP_161541092.1|1705908_1706826_-|histidine-kinase
MSVARRQGPVLMATLGEQPQVVTLTLDLLAAQRMEVEELVVFHTAAHYPALRRSLELLDAELRQWPAYRSLTVRRVLLRDEAGRELTDVRTEQEARQVFRILFREVLEVKRQRRPLHFLIAGGRKVMAAYGMAVVQLLGEAGDQVWHLISEGELLASGRMHPEPGDRVHLVPVPFVRWSALPPAATRLAVTGDPFEAMRLHEAWLDEESRRQRAWFLLHELTPAERTLLVALARTGASNSELARMLKRSPKTVANQLATVADKYRAFAGLAEGVPLSRAELVAHFAPVLDRIGEPCREESLQTFG
>NZ_AP019797.1|WP_161541091.1|1703592_1705806_-|CRISPR-associated-protein-Csm1
MDQGQIAYLSGLLHAVGVLEQLGPQTFRSPAEASLHFTDQVLEACPAFGPHAGAIREAVRAAAEALPAARPSSWLESLLQQVRLPGHPEPAAGRVYPPRPLSEGTVYPVAPEEVGDGREACRNLWQELQAETTRALRGIQDVEAALETLYTLLEKYTAYVPAPDAGARGISLFDYSRVTAALHLCRARAGSEPAVLLVKGDVSGIQSFIYRELRGDATENPAQLLRGRSFFVALLTRTVVRHLQRQFRLPDGCVLYSSGGHFLLLIPNTEAAPQQLDEADRQINQALFEELRGAIQLVQASVPVSIEEVERRPHEALRQLEEALQMAKLRKGWNVLDTLVGQPIEEANQTPKLHRVGQALPYTHYLVEVPGLAANQAPDGVRCALELRGFAVTWLFVEEDRIEAIVGQLGTRRGTVFNIRTPRIPNLPGAMQVGRRFLPAGVYVPMLADDSRPLMFEELAAIESENYPLLGFLRMDVDNLGALFVVGLHAAFGNQPFGLHRTAALSRELDRFFGGQVNALARGHDVYLVYAGGDDLFAVGSWIRVLRFARSIREKLREYCAGNPSVTISAGLSIHKEHFPITVAAETAGEEEDRAKAAGKNRISVFETPVTWERLSVLLDELGEPLLLAVSDETLPDEDRLPRTFLHTLLRYSREVLDEEGRIDLAALARFNHLLHYTFARRGVHARVLETDTQEGESPKMRLARGFLLEGPDRSEWFRTFVIPAAYVLLKTRKQRN
>NZ_AP019797.1|WP_161541090.1|1703176_1703563_-|type-III-A-CRISPR-associated-protein-Csm2
MDIPKDLAELEPEAIDRLAHDMGRKYAEKEIKTAQVRNVFAHINRMRTRLRRNRSVSPEIIKRDLVMLKPRLAYAGGRQEKVRPMSEDLRQVVNAVLNSQSFEKALQNFFDLVEGIVAYHKFYGGKDN
>NZ_AP019797.1|WP_161541089.1|1702365_1703160_-|type-III-A-CRISPR-associated-RAMP-protein-Csm3
MAGFLGNIVLKGKMECLTGLHIGGSKEKFEIGGVDQPVIRDPATNYPYVPGSSLKGKMRSLLAFALGKAHEDPNFRSFDPDCPLQRVFGTSAEARNIGPSRLIVRDAFPDEETIQMWENLDTELLYTEIKAENGIDRLTSAANPRFPERVVRGSRFNVEFVFGVYEVRDADYFRYIIDGLRLLEHSWLGRSGTRGYGQVKFKLAEPIIVTLNDYLNGGEAYRRANLPHEELTFDLETASFDEGRFESIKQAFRQVAEKLATNQA
>NZ_AP019797.1|WP_161541088.1|1701355_1702369_-|type-III-A-CRISPR-associated-RAMP-protein-Csm4
MTLQAIYLYPRASFRTPLRSDTLWGLLVVALRVVAGDREADDFIAACEAGQPPVRLSSAFPFVEVSRGDGAPVIRHFFPRPVLPPPPLLEPSRADARTVFEQMKQGKKLRQIRWLPQELFERVLQGELDEAGLQQALQQSGEQKQWPVILTQDNLHTSIDRLTGTTRMENDAGQLFYSHEYYLKRGHGLFFLCEGDVERIAPALRYLHHVGWGGDSSVGKGHFDWALRRLELQVPAKPTHRLLLSLYSPNPEELAHIRRHRDQTFYQLERRQGYAGAHRLPGSAYRKKPLYMFAEGSLMPDPGHPLRGTVHTVMESAGIQVRHSGLALDLPAYLRSS
>NZ_AP019797.1|WP_161541087.1|1699682_1701338_-|type-III-A-CRISPR-associated-RAMP-protein-Csm5
MPITLKLITRSPVHIGSGHELESFEYIIHDGFFWRLDIDRVTAFLLDEIGEESIEQFASWIERNTERLANARDNRTQSEIRRSLTLRTFVRNELGRPDVDARLLQQLSELSRYAMRTPFSEFRQLVREQLKDPDGRLYIPGSSLKGALRTCLLYQVLVEADERNLQRWLERMRAALPAAGKRLGGRDRVFFARWLEQDIFYCGLKKKEKVSWKDAQFDLLKFLKVSDSVPVAADEGGVVTDVQILLPGSNPQPQAPPVEALEAGVELSMSVSFDVSFFRAATDLLKQGAQGMGTEIWIGLPEKFQRLYGFSLEEAAAMAPEELERRLLERVRTAARNFARALKTFEKEWCRRAERGSTLQISRRLQRFYDEMPEDMLRLGWGSGFAAATVYLALREKPAWQETLEDLLYRLFSLKEREDLLQTFPTSRRMALDGEGAMIAEPMGWVELEWPWPASEAEATAEEEEAAEDDSDLWLDEIGPKSQDIVAEVVDNSRSPFTIRVFVRGLENERFPCGGANHRVLEVGQRIRVQVAQWNKKEGRPAMFRVQSIRV
>NZ_AP019797.1|WP_161542393.1|1695309_1698018_-|VCBS-repeat-containing-protein
MLAVLIIAWPLQAQKTDYVFNVPVSDNFKDPYTVGFHSGARGAYGPCDMDGDGLVEVLVTDYSGGGRVYVIENKGVDTWELVYATPWMDSTSTSQNARYAVCGDLDGDGKGEFMFLSGRSYSATNPLVGQLNLRPGLFVYEFTGTDDDYGTGPASIYDFPDDLPDRWVSEQMVVADVDGDGQQELLFPNNGSNNRYDNWYILSVTGDIGSGFEVWVEEVRISSRASEDFDPVNRGGGSPYAILPADLDGDGTYELSMHSWNNFNFTNGDVLGPDQYQFPDANAQNVYVHASSGDHVALFGGVVVDINGDGDDEVFYPNFHTGQLAVLNYESGENPLEITTDQLIFPLLEGPTNLGITTGDLDGDGHPELIGAGYSYSGSAFTAGEPSYFIRVAEFTGTDPEDPNSYTLMDVNTALPIDSTTFNVIFRDSAGVPSRYYEPSGGNDPYFPAKLSYLGDPDGDGQREVVVSFQGVDDSLDTYDEVWTEAVEAQQWSFTADARDVAYSSGNNLVLALVKDAGAPMLLALDPDDGTAVDTLDMTGVAGGDEVLNALAASGSALIAVNLVNDASTAAIRLYQWTGAFTGAPEVVLDTMLASGGRFGNALGAYISTDSIAFIGGDTQIFRTGTDGQNFLIDLPAQGAASGGIAPVSATRLWINGAGQPVRLIDDTGQVLATIDDSVVPLDAAGVAYYRFTPDFAGFSAELLAIGPDNAGVFYLVDVTDTQNPRLVGTTSGGSGSLISGVGGGVAFDTRQRQIVGVNAGASLVAHPFQYGYVRTLRERRAAPARAFMRIIASDGLTVDIDQERVILPSDYRLSAAYPNPFRERMQFTVTLPLAKRITVRIYDMLGREVRTLARDALYGPGTHTFSWDGTDAAGQRVASGLYFYTLEFGHFRKVGQVMLVR
>NZ_AP019797.1|WP_161541086.1|1692543_1695237_-|carboxypeptidase-like-regulatory-domain-containing-protein
MMATRYGLLPGLLLMLVVPVWAQTGKLAGYVRDAETGQPLIGATVYIEETGQGAVTDAQGYYVVLNLRPGLYTVRFSYVGYETVRYTDVRIVSDQTRELEVRLRPSVVAGEEVVITAQRPLVQRDLTSSRKTVVAEEIQALPVESFLDVLALQAGVNRGPSGELHIRGGRSTEIAYLVDGLSVGNPFNANGLATEVATNAIQELTVVSGTFNAEYGQAMSGIVNVVTKEGGEKLEGTFSAYAGDYLTRHEDIFYLPPGIQRNTTTIEGTLGGPVPLTGKKVRFFFSARRDQSDGHLWGIREHLPSDSANFNVNPWYYEIQGRPWTAYVDSLPVPDERVPMNPRTSSNLLLKLTARPFQTLKVEYTHMRDRARTRPFAFEYRFNPDGVVTYRDWSRNHALHLTHTLSSRTFYTIRLSYATHSFRSYLYENPTDPRYVSDGRIVGFPGNQFLFGGDQKGHVYEDSRSWRAKLDITHQFGRIHQAKAGIDWNVHYLSRENFVVLYDGNQYREPTVPPLDSPAHDRYRNRRVLIWSAYVQDKMEFEQFIVNAGVRFDYFWPEGEYIPDLLDPLGPRRRSRPRYRFSPRLGISFPITETGFIHLSYGHFYQMPPLRNIYINPEFEFGVGTTPTFGNANLRPERTVMYEIGLQQQLGALVAIDVTAYYKDIRDYLTLQTVQFRTASDPLYRIYLNKDYANVKGLTFSLTKRRGRDDRLAATLDYTFQIAEGNRDDANAFYFNFLSGRETPLELVPLDFDQRHVVSSTVTYGTGSWGVSLKGQFATGYPYTPELINQKVDLKPNSARKPSQMTVDLYLYRTFTLGPASLQLFARVYNLSDRLNERFVFNDTGRATYSLARYRNLHATWEPYYGKPGIHTLDEYLTRPHWFGPPREVRVGMSLSF
>NZ_AP019797.1|WP_161542392.1|1689133_1692529_-|hypothetical-protein
MRKTAVLGILLVLSLFGERFARAQSEKEWREGRRREWTLKQVYRWYTYLERQPLQQNQLDCPDYTTRRDVVMNGNKITTQITNFGSISSPGNTITDIVWNGLGYGYEFGPFVAAEVIDEGHKDPQSVPMRDEQGNVVYDANGDTIWVMHIVSDGLVSNGGERSPDGKEWWGWQPIPCAQPVGSFEGLEVVNPESDEIPTNDAPDRDLDGRPDSWPESWYNPNLRQYVWPGALRQGVSNADKEALYFMNDYSNKEFHYYPFPDDSTKRGLGLEVEVRIYQWSNPLAEDAIFFVYKITNKSPKDLEKVIFGMWGDPHVGGPGDWHDDLAYFDRRLNMVYAWDADGRSDIPGRKPGYFGYKFLESPGIDYDGIDNDGDGMVDESWYDGIDNDGDWDPERDDVGIDGIPGTGDEGEGDGLPTPGDPYDIRRPGEPNIDFTDIDESDMIGLTSFASPPFAGNRISNDERVWSFVQPGRFDEVPPEPGDYVFIYGSGPFRLRAGETKRFSIALLMGENLDDLMLNAETVQEIYNAGYRFAKPPEKPHVVAVPGDRKVTLYWDDRAEYSVDPLSGENDFEGYVIYRSTDPEFADLQTITDINGTPFLYEPLKMVTGVPARFDRINGIQGLSPVPYPRRGVAYFLGNDTGLRHTFMDSNNVINGQRYFYAVVAYDHGAPDLGIPPSETSKTITYNPETDTYIFDVNTVSVVPRPPAAGYVPPEVVADEPSATGPVAHVSGHGTGTIHIEVIDPMAVEDDNPYRLIFEEVDGQLVYSVIDEKPVEVTIQVGKVGKSAGLGYRNIIPETFELLHNGQPLQEGVDYTLNARAGRVIYLDGGAIEPGMELVARFQYRPIDRSSLLNFEEANPIFDGLHLFVRNDPLAIDSVHTGWVQGGSGFTYQVRVATAGPGRRGVPYDYEIRFANQIVDTSFSTRLPLPFRVYNRTRANEPVDVFVPDVNRNGRWDIDERIIFLEYQDGSPIATWEVRFFDPENRGTLPGEGDVFQVVTRKPFTIEDVFTFRTRAARTEPEKVRRQMREIYVVPNPYVATNVLEPRNPVSRTRRGDRRLYFANLPPRCTIRIYTLAGELVDVIEHDSPIDNGIAYWDLRSRDNMDIAYGLYIFHVESEEGTYVGKFAVIK
>NZ_AP019797.1|WP_012845294.1|1688094_1689162_-|PorV/PorQ-family-protein
MSGSLRSSNNLLKLLAVVFLVGGAPAVRAQLSNEGPARGTITKVGTTGAQFLKLGVGARPLALGGAYVALGTDLPAIYWNVAGLAWFRGGAAQFTHTDYLAGISYDVALVAISLGSAGSIGAGLYYLNSGEMPVRTVEEPEGTGERFSVQNLALQLSYARNLTDRFALGGSVKYIRESIWHSSASAVAVDIGVRFITPFERLVIGASISNFGPKMRMDGRDIYFSVDPDLQNQGNVEVVNAAYLLDSYDLPLLFRFGVAFTAYENRDVRFMLLSDAAHPNDNTEYMNFGAELNLRDLLALRIGYKNVFERDGEQGLTLGGGLTLVSAGLRAHFDFAHASFGRLGSTRWVSVGVAF
>NZ_AP019797.1|WP_054684809.1|1707851_1708037_+|DUF4236-domain-containing-protein
MPLHLYRTFRLGPVRLTISHRGIGLSIGTRGLRIGRTPSGRPYIRLGRGRWRLEKRLPERP
>NZ_AP019797.1|WP_161542394.1|1708159_1709188_+|hypothetical-protein
MRHPATEASTEAPSSILTEAPDWIADDGLLRDEGVIVGRALGTDPLSENNGPHFWKLETIRAYYDERRAPLKAQLEAIRRQLTRLQHREAELREELVRHERALAALAEVETRLPLTGRNLLLAAILTVVCALTPFVVAELLPSERFEHPLAVAMALSLLGLFALFQGRSLLVAADARLSGAPMRPERWKLYAMELLPPLAVALLVAALAHRSEEGWLPTLVIGFALLLLLLIPGRLLMSLLARTLPELSGWWRMASHRWRLRRHHRRAAAALRRDLEKLTRLRMQLEDETIPLLERKLAFLDARCRRKEALFRSEMELARQRNLLRARYESNGQQHSPEISL
>NZ_AP019797.1|WP_161541093.1|1709208_1710996_+|hypothetical-protein
MLQIFRRKSHPEASSPADNILMLPVGAEEPDPNRPHLYGQYDGGLAVENDAFAEFLQAASRREHLAERITALLEQRHQIQEQLRQAEAAHISAQTLPERLQALERALPEARQRHEQLRQQREACEKELETLHQSHEAYSLVQMLMYGTAGLAFLLGDIIVSKEIVAQVLYLPLEYERWLFAVGLACITFVLKVAYDRLVELPFWQRVQKRFEVVILSISTLALITLIFMGALRTQEIQRQHMLRSTEQTTWSLEADAPSIQQEIPGPDGTVLLVTFMLAAVMFATAGAVCFSTAHTHARGYFHRYRPLRQKCARLSDQEREAALRLETLEENLTRGREELARATATLALVGTPEVLRQDLQKLEDRIAQLQDQLADLLVAQRQASYRSGRERALHYQRLLASQSSKEETDELPDASSEQEEHEEAADALPEATAAQEMSEKEADALIEMLTAQDNQEDATSTLPEVSVAQNDREDLHEAEAATDELPGERSESREATPESLPGEHEAAQPVALTVAHSDAAPEDSEAFQTGSNGAASPMPIGSSVTSDVEGESAAVGGDGAERSTERRSRRERGVRHGLRRPFLDIRDEILDLTA
>NZ_AP019797.1|WP_161541094.1|1711002_1711821_+|hypothetical-protein
MRWFCLFFLIATLGCSSEAQRDPLTACADENLAHESLTGIPRTALVFIDRSSSVTASPDTRRAFEAALRQQVEAILPVRGGTIQVFFVHSRTTGKADARTFVQDAPLPRVSPYDSEQRQACRQYVSEVQYRMRAARDSLLRLLDEQVTTSVTEATDLWGIFEVISETLPASNEMPPATVLVLSDLLECMPGPERRCFESRPPTSRAQAEAWAREDAERIQRSYRIRPEVLRQAHYVLISGDFANREESRYVRYYWFALLEAFGVPYEQISIQ
>NZ_AP019797.1|WP_161541095.1|1711824_1712673_+|TIGR02221-family-CRISPR-associated-protein
MRVQLSFIGTGKYQPCIYVWNDQRCETPYFQEAAFQFFEPEDCLVLMTEEAERIHGQALSARIAYQPIRIPDGRTEDELWEIFSTLTEHVPQDATLIVDVTHGFRTQPMLALAALYYLRVTRNVEIERIVYGAFEAHNPETNEAPVFDLTPFLTLIDWSVAAHQFMRYGQAEDLARLIREIHRRTHVERAGVQARHAAPAASWLQGFARGLALARVTEVMTKHACCLPEALEQVRQEVNRIARLRPFELLLDQTAERVRLLYHDNRARKPTASAVGGIAPCP
>NZ_AP019797.1|WP_161541096.1|1712723_1713872_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MQTLTLRTRLDPTPEQAAALEETLERFAQACNLTLEVARACRTFSKFKLQRLVYGQLRALGLSANLAIRAIARVSHRKGHCAKHYRPTSCDYDQRTLSLRGQTVSLSTTRGRLRIPMRLSPYHRYWLARARSVQGGRLLRDRRGRWYVHLTVRVAVPEALPTGRVVGVDLGQRLLAALSTGECLSGGALKTKRLHYRAKRAEIRSKLDRPSERTRSLRRLWARLSGRERRFVRQVLHEASRRIVDGLAAGDVLAIEDLRGLRGRTIRRGRTDRHLHHLWPYALFRRLLEYKARLKGVRVVVVDPAHTSQTCPRCGHVDRRNRRSGRLFRCRACGFQHNADVVAALNLARRAGSEGMGRCQPAPGAIPAGGREGKPTTSVVGS
>NZ_AP019797.1|WP_161541097.1|1714258_1714651_+|CRISPR-associated-protein
MLINLSNHPASTWGEAQRAAARIYGEIEDWKFPLIPPEWDESQVADLAKTYAERIVRRLNEAGKGCHAVHVMGEMTFTCTLVRLLHQRGILCLASTSQRMVEEDPASGKKIAYFRFERFRPYPCLQALSF
>NZ_AP019797.1|WP_161541098.1|1714763_1715162_+|hypothetical-protein
MRTTHNLILYITDMEPDDLRTAERLIEAFEEELGCVLEYDPEHRMLSLYTAMVVEPAEASGAALRQMLHCVYHLVGRFLQEYRLIFSVSTSSGASGSRPLGTILERSPYDRLLSQLITPEYPRLLPPEPPLC
>NZ_AP019797.1|WP_161541099.1|1715165_1715531_+|hypothetical-protein
MRVWFTNFFAREVPCTLEISVTLEGGEHPPQLVDFLRKRADRLWTNPDGSMLAVFIREFRLESLQQRLPRFLRALELRLLRLGACRGTLAWRPAFAYNWSLEGWGCSREQALEHLLRLQRN
>NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein
MERYNLLIALGISPAVLTETIWTLAVEHPQPAIPAEIHVVTTLTGERTLRNRLFDTPDEEGLSVWARFCREVLQLDPEAPEAPRFHIHVPLRGNGLKLDDIRTWDDDRRYAELCYRVVAQLCADPDAPRVVASIAGGRKTMSAHLLTAFSLYARPRDESIHVLVHPERPVLEDPTFFYPRPGSGMDVRIERVDLHLVRFRNQLEELARLHRGGQLPRTLQELESLPGLGLRPARPALVEVVLGDRTERSLRLLDAEGNEMAALKPVAPLPLVTLITLYEMLRRADSPEISNLQLVENEQVEALRNAAYAFCRDLAQLRPWGDTIALSRSISELNQLLAGNPLCNRYLRIHSRRTWDETFYAFGTEPPALRVCVPRALDYIQNWPFQHVPLTYID

Crispr_ID: NZ_AP019797_10

• CRISPR_ID: NZ_AP019797_10
• CRISPR_location: 1723943-1725974
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 25 spacers
• Cas_protein_info: cas1,cas2,cas6,csx1

Consensus repeat of NZ_AP019797_10

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

spacers of NZ_AP019797_10

>10.1|1723980|42|NZ_AP019797|CRISPRCasFinder,CRT
TTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAG
>10.2|1724059|47|NZ_AP019797|CRISPRCasFinder,CRT
CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
>10.3|1724143|47|NZ_AP019797|CRISPRCasFinder,CRT
TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
>10.4|1724227|52|NZ_AP019797|CRISPRCasFinder,CRT
CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
>10.5|1724316|36|NZ_AP019797|CRISPRCasFinder,CRT
CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
>10.6|1724389|58|NZ_AP019797|CRISPRCasFinder,CRT
TCAAACAAGCCCTTAAGGCAAGGGGCTTGCTAATCGAATAAAACGGCTACGGCCAACC
>10.7|1724484|37|NZ_AP019797|CRISPRCasFinder,CRT
GCCGACAGGTCCGAACCCAAGCTCGGCTTGGACGATA
>10.8|1724558|40|NZ_AP019797|CRISPRCasFinder,CRT
CGATCCCAGTCGATTTCCCCATTCTCTCCGGTACAATACT
>10.9|1724635|41|NZ_AP019797|CRISPRCasFinder,CRT
CCAATAACCAACCGCGCATGGAGAAATGGTACGCTACTCTC
>10.10|1724713|52|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
>10.11|1724802|54|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGTCTCGGCTTGAGAGTGGCGGAGCGCCCGCGTCGATCATGGCGACGGTGTGGG
>10.12|1724893|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGTGGAGGTGTCGCCCGTGCGCACGGATGTGTACGTGA
>10.13|1724968|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTGGCGGACACGGTATATTCTTCGGAGCGATGGCTG
>10.14|1725041|48|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCAGCCCCATGTGTACCTGCTGAGCAAGCGCTCAGCAGGTCTCACCAT
>10.15|1725126|41|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCCAGTTAGCCAAGTTAGAAAAGATAGCCCAGGAAAGGGGC
>10.16|1725204|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGCACAGGTGATCGGCAGCGTGGAGCGCATTAACCTGC
>10.17|1725279|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGCCTACATATTTCTGCACAAAAACATGCACGTCCGCGCGCA
>10.18|1725358|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTTCCGTGAATTGAATAAAAATAACACGAAGTTATTAA
>10.19|1725433|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
>10.20|1725510|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCACAGGAAAGAAAGTCGCCTACTTCCATTTCATACAATTCA
>10.21|1725589|44|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GTTCCTGTGCTGAAAGAGCGATGAAGACCGGACGTTGCTGCCGT
>10.22|1725670|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGTGGCGCCAGAAGGTGTACCTGCTAGACAACGACGAACG
>10.23|1725747|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
>10.24|1725823|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
>10.25|1725900|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT

CRISPR arrays and Neighbor proteins around NZ_AP019797_10

CRISPR arrays

The CRISPR arrays of NZ_AP019797_10

>merge|NZ_AP019797|10|1723943-1725974|CRISPRCasFinder,CRT,PILER-CR
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGGTTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGAATGGTATGTGCCGGGCTTGCCATGATCTATCTTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTCAAACAAGCCCTTAAGGCAAGGGGCTTGCTAATCGAATAAAACGGCTACGGCCAACCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGACAGGTCCGAACCCAAGCTCGGCTTGGACGATAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGATCCCAGTCGATTTCCCCATTCTCTCCGGTACAATACTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCCAATAACCAACCGCGCATGGAGAAATGGTACGCTACTCTCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGTCTCGGCTTGAGAGTGGCGGAGCGCCCGCGTCGATCATGGCGACGGTGTGGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGGTGGAGGTGTCGCCCGTGCGCACGGATGTGTACGTGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTGGCGGACACGGTATATTCTTCGGAGCGATGGCTGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCAGCCCCATGTGTACCTGCTGAGCAAGCGCTCAGCAGGTCTCACCATGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCCCAGTTAGCCAAGTTAGAAAAGATAGCCCAGGAAAGGGGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGGCACAGGTGATCGGCAGCGTGGAGCGCATTAACCTGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGCCTACATATTTCTGCACAAAAACATGCACGTCCGCGCGCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTTCCGTGAATTGAATAAAAATAACACGAAGTTATTAAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCCACAGGAAAGAAAGTCGCCTACTTCCATTTCATACAATTCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGTTCCTGTGCTGAAAGAGCGATGAAGACCGGACGTTGCTGCCGTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGGTGGCGCCAGAAGGTGTACCTGCTAGACAACGACGAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|10|10|1723943-1725974|CRISPRCasFinder
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGG	TTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCAAACAAGCCCTTAAGGCAAGGGGCTTGCTAATCGAATAAAACGGCTACGGCCAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGACAGGTCCGAACCCAAGCTCGGCTTGGACGATA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGATCCCAGTCGATTTCCCCATTCTCTCCGGTACAATACT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCAATAACCAACCGCGCATGGAGAAATGGTACGCTACTCTC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGTCTCGGCTTGAGAGTGGCGGAGCGCCCGCGTCGATCATGGCGACGGTGTGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGAGGTGTCGCCCGTGCGCACGGATGTGTACGTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCGGACACGGTATATTCTTCGGAGCGATGGCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCAGCCCCATGTGTACCTGCTGAGCAAGCGCTCAGCAGGTCTCACCAT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCCAGTTAGCCAAGTTAGAAAAGATAGCCCAGGAAAGGGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGCACAGGTGATCGGCAGCGTGGAGCGCATTAACCTGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGCCTACATATTTCTGCACAAAAACATGCACGTCCGCGCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCCGTGAATTGAATAAAAATAACACGAAGTTATTAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCACAGGAAAGAAAGTCGCCTACTTCCATTTCATACAATTCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTTCCTGTGCTGAAAGAGCGATGAAGACCGGACGTTGCTGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGCGCCAGAAGGTGTACCTGCTAGACAACGACGAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|10|7|1723943-1725974|CRT
AACGCTATCTCCTTTTCATCAGGTCAAGTCTTCAGGG	TTGGCTGACATGGGCCCGCTCATGCGCAGGCGGGCCACGCAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACCGCGTAGCCCAGGATATCCTGGGTTACACGAACCGCGCGAACAG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TAGAGGCACTGGCCGAACTCTCGGAGGCTGCCGAGATTCTGGAACGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGAATGGTATGTGCCGGGCTTGCCATGATCTATCTT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCAAACAAGCCCTTAAGGCAAGGGGCTTGCTAATCGAATAAAACGGCTACGGCCAACC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGACAGGTCCGAACCCAAGCTCGGCTTGGACGATA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGATCCCAGTCGATTTCCCCATTCTCTCCGGTACAATACT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCAATAACCAACCGCGCATGGAGAAATGGTACGCTACTCTC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGTCTCGGCTTGAGAGTGGCGGAGCGCCCGCGTCGATCATGGCGACGGTGTGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGAGGTGTCGCCCGTGCGCACGGATGTGTACGTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCGGACACGGTATATTCTTCGGAGCGATGGCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCAGCCCCATGTGTACCTGCTGAGCAAGCGCTCAGCAGGTCTCACCAT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCCAGTTAGCCAAGTTAGAAAAGATAGCCCAGGAAAGGGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGCACAGGTGATCGGCAGCGTGGAGCGCATTAACCTGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGCCTACATATTTCTGCACAAAAACATGCACGTCCGCGCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCCGTGAATTGAATAAAAATAACACGAAGTTATTAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCACAGGAAAGAAAGTCGCCTACTTCCATTTCATACAATTCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTTCCTGTGCTGAAAGAGCGATGAAGACCGGACGTTGCTGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGCGCCAGAAGGTGTACCTGCTAGACAACGACGAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|10|8|1724676-1725974|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CACGTCATGGGTGAGATGACCTTCACCTGCGCGCTGGTCCGGTTACTACAGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGTCTCGGCTTGAGAGTGGCGGAGCGCCCGCGTCGATCATGGCGACGGTGTGGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGAGGTGTCGCCCGTGCGCACGGATGTGTACGTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCGGACACGGTATATTCTTCGGAGCGATGGCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCAGCCCCATGTGTACCTGCTGAGCAAGCGCTCAGCAGGTCTCACCAT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCCAGTTAGCCAAGTTAGAAAAGATAGCCCAGGAAAGGGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGCACAGGTGATCGGCAGCGTGGAGCGCATTAACCTGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGCCTACATATTTCTGCACAAAAACATGCACGTCCGCGCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTTCCGTGAATTGAATAAAAATAACACGAAGTTATTAA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CCACAGGAAAGAAAGTCGCCTACTTCCATTTCATACAATTCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTTCCTGTGCTGAAAGAGCGATGAAGACCGGACGTTGCTGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GGTGGCGCCAGAAGGTGTACCTGCTAGACAACGACGAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGGCCCGGCGAGGTAAGCCGGGCGGTGGCTGGCTATCTG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCAATTTTTGCCTCCGTCTCGGTGAGCACCGTTTCTCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTCGGCAACGGCTTCGATCAGCTTGGGAAGCGTTTCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	gnl|CDD|187817
NZ_AP019797.1|WP_161541110.1|1726627_1726948_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_AP019797.1|WP_161541102.1|1718104_1719094_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	gnl|CDD|337605
NZ_AP019797.1|WP_161541114.1|1730073_1731555_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|366099
NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|350691
NZ_AP019797.1|WP_162556495.1|1739205_1739421_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541106.1|1722012_1722738_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein	unknown	unknown	gnl|CDD|236966
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	gnl|CDD|187878
NZ_AP019797.1|WP_161541104.1|1720045_1720327_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP019797.1|WP_161541101.1|1716775_1718119_+|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	gnl|CDD|187863
NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein	unknown	unknown	gnl|CDD|377317
NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein	unknown	unknown	gnl|CDD|377317
NZ_AP019797.1|WP_161541109.1|1726192_1726567_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541099.1|1715165_1715531_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541116.1|1735414_1738510_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein	unknown	unknown	gnl|CDD|274008
NZ_AP019797.1|WP_161541103.1|1719155_1720031_-|DnaJ-domain-containing-protein	unknown	unknown	gnl|CDD|99751

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	csx1	cd09686_csx1_CAS-III	9.2e-43	141.3	0.0
NZ_AP019797.1|WP_161541104.1|1720045_1720327_-|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	6e-24	78.8	0.0
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1e-97	321.7	0.0
NZ_AP019797.1|WP_161541102.1|1718104_1719094_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	3e-101	333.6	0.9
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	5.4e-46	151.9	0.0
NZ_AP019797.1|WP_161541101.1|1716775_1718119_+|TIGR02221-family-CRISPR-associated-protein	csx1	cd09732_csx1_CAS-III	1.2e-52	174.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein	gnl|CDD|187817	cd09686, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as NE0113 family.	2.42628e-39
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.60625e-122
NZ_AP019797.1|WP_161541102.1|1718104_1719094_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	gnl|CDD|337605	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6. Cas6 is a member of the RAMP (repeat-associated mysterious protein) superfamily. It is among the most widely distributed Cas proteins and is found in both bacteria and archaea. Cas6 functions in the generation of CRISPR-derived guide RNAs for invader defense in prokaryotes.	8.46303e-07
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	4.9115e-35
NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein	gnl|CDD|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	1.25878e-06
NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase	gnl|CDD|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.27887e-33
NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein	gnl|CDD|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0.00322704
NZ_AP019797.1|WP_161541104.1|1720045_1720327_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.2599e-23
NZ_AP019797.1|WP_161541101.1|1716775_1718119_+|TIGR02221-family-CRISPR-associated-protein	gnl|CDD|187863	cd09732, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as TM1812 family.	2.14598e-42
NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	1.98834e-21
NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	3.30234e-13
NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000214258
NZ_AP019797.1|WP_161541103.1|1719155_1720031_-|DnaJ-domain-containing-protein	gnl|CDD|99751	cd06257, DnaJ, DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.	4.17577e-08

Protein sequences

>NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein
MNEVQPLFTVGYGTSSIEEFINVLKQYEIKCIVDIRSNPYSKFNPDFSIGTLKNHLEKNGIAYEYMGDTLGGKPTDESCLENDKPIFSVIKEKDFFKEGIRKLLSLWRYYQPQRIALMCACQYPDKCHRSKLVGQYIYETRSDNDIRIIHIYKDKNGEYKVIEQDKVILKIVSGQLNLFGFDFESKIAVSGKKIKKDA
>NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein
MIEQIFTIGVYGRDEDSFFDTLQQNKIDTFCDIRQRRGVRGREYKFVNKNYLCQKLDKLGIRYVYLKELAPPREVRAIQRAVDQKKSILKRQRTLLSHAFIEAYKQACLSKISPVDIFAKLPVDSKRIVFFCVEKDPRACHRSILTDWIEQKENIPVVHL
>NZ_AP019797.1|WP_161541106.1|1722012_1722738_-|hypothetical-protein
MNKIKVLIVARTRTNNDQMRCIGGLAWEENEAQCYSVRLMNPRDLYRGRIIRRGFKGFWDTSAPYRIGDVWELTVRELEQKIPPHVEDVIVEDAILLKKIRVSEMYDRILYMLQKSRLPILWRGDPNNLFDGKIQFNKNGKGYIDKNNVSKCSTGFWLPDKNLYKSYDSNNKLCYRYKADNNRLYYIPYVGVFSKTPPVIKEGSLIRVSLSRWHRETEMCWLMISGWFEPPHPRLSCDLYG
>NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1
MQAPYEGPCWPVAWVYEFAYCLRRGYYAWVEGPGEPVALSSGEGTWMAADGWCGPVQFIRDGHGSPVPVIRLAHVAESDTAERPEHLMLAALARLIEAETGQSVARGIVQYGPTGRQEVVTLDERLRAAWQRLDAEIRAVIHEGRLPAPRADQRCPACPRLEVCNPSGAAETAAQLNVLPPVRQARTLYVDEIGAVVRRDGRQLVVTVSRNGTRRELLRLPALLVDQVVLVGPVQITSQALRLLLRQNVDIVYLSTEGRFEGRLATEFHPHVALRLAQYEAARDPQRALPLARQFVRGKLQNMARLLRHYAQDYRNSTLEATAAAIESDLQHLSELKSPDAVRGLEGAATRRYFSVFNEMLRPEAHEPIDWPVFPGRNRRPPTDPVNATLGYLYALLLGNLVTACAVAGLDPYVGYLHTPAYGRPSLALDLMEEFRAPIADRLTLHLFNRGKLRPRHFEERSGGVYLNEEGRAVVLAAWQEWRQQVSRHPVLGLEMSQMRHFEAQARLLARTLQEPGAEYTPFVA
>NZ_AP019797.1|WP_161541104.1|1720045_1720327_-|CRISPR-associated-endonuclease-Cas2
MAFWLIGYDIADPRRLQRVARLLEDYGQRLQYSVFLCRLEAEAIRQLRRGLLRIVDLEEDRLFFLRLCQGCIEALEQIGQGKGVDLRQNHWIV
>NZ_AP019797.1|WP_161541103.1|1719155_1720031_-|DnaJ-domain-containing-protein
MDQFERVSTLIERGNYEAAFLLLGDSVDLALRELEADRRARRNGTILGIGLSLLTGGLGLEDLIIGPLAYKAARFFGGGTMKPEEAGALLWEALNLRLLMIKHFAEIVITAENPARILRDLLVVYFIAKESFERFDELLPVLIAPTQEKNLHRIVSQLEAEVGDERTHDFDTILFICLLLYGLQHWNLYQKLRTGREALEQEIEEILREERYGASEAGADLDRALERHYAAVLELEAPYTPEKVRRNYRRLIKTCHPDRMQQASAAERRQAEERARELNEAYEYFRARLNF
>NZ_AP019797.1|WP_161541102.1|1718104_1719094_-|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MYETLLQSSGLARLRWSVVRFELEAVSPIDLGDLPASTVRGALGAALRRMVCITRLPTCTDCPFRWPCVYGYLFETPPPPDGRFLRGLQDVPRPYVVRRPGLEERRFAPGERLTVELLLVGRARMYLPYLTLALVRLEESGLGRGRRDGGGRFRLVAAQALRPDGSLQQVYDAGARQVLADVPEWTAAELLAGESPASTVLLRAPVPLRLKAQGRLVRRLTYRILLRSVLGRLSSLAAFHAETELQLDYADLLRRAEAVRVREDRMQWRDDLQRYSGRQRTTMRQGGLVGEIVFEGVPPETWPMLRLGAALHVGHSTVMGLGAYELRPL
>NZ_AP019797.1|WP_161541101.1|1716775_1718119_+|TIGR02221-family-CRISPR-associated-protein
MSEKLLTFLGVGDRNRQLEAQLQDREYQRVRYFLPDAPDKEIETPFVGQAILELHPDRFSQVVILGTVDSMWDTLLIHFLSDTQTEAEIELYTELFEAIEHKREAEVENLLPRLTRVLEKRWRPGLQLKLIPVGRTQEELWQIFETLTGLKPSNTTLSIDITHGLRYQPFFLLLALQYFHLTRPNVRLGSVFYGALELHDYYEGRAPLFDLRPMLELMQWSLAAQAFVQYQDPEPLLGLLRDPRQERLRHELRQFARQINLNLFNDFRNRAQKLSHQLRGLSQREENMPAPFRLVEPFLVDFCETFAGAQSDWEALLRLARRHLKYRRPALAVLAAYEAVVHRLCEIYGVRPAAKNSRGKRYSSELIQALKRGSIISRALPELKELIKAVNELQEIRNNTAHFRTDSEGPDPGYRLTKIKTLLTILEEKLGHPTLEQLPHLYPLERP
>NZ_AP019797.1|WP_161541100.1|1715584_1716769_+|TIGR02584-family-CRISPR-associated-protein
MERYNLLIALGISPAVLTETIWTLAVEHPQPAIPAEIHVVTTLTGERTLRNRLFDTPDEEGLSVWARFCREVLQLDPEAPEAPRFHIHVPLRGNGLKLDDIRTWDDDRRYAELCYRVVAQLCADPDAPRVVASIAGGRKTMSAHLLTAFSLYARPRDESIHVLVHPERPVLEDPTFFYPRPGSGMDVRIERVDLHLVRFRNQLEELARLHRGGQLPRTLQELESLPGLGLRPARPALVEVVLGDRTERSLRLLDAEGNEMAALKPVAPLPLVTLITLYEMLRRADSPEISNLQLVENEQVEALRNAAYAFCRDLAQLRPWGDTIALSRSISELNQLLAGNPLCNRYLRIHSRRTWDETFYAFGTEPPALRVCVPRALDYIQNWPFQHVPLTYID
>NZ_AP019797.1|WP_161541099.1|1715165_1715531_+|hypothetical-protein
MRVWFTNFFAREVPCTLEISVTLEGGEHPPQLVDFLRKRADRLWTNPDGSMLAVFIREFRLESLQQRLPRFLRALELRLLRLGACRGTLAWRPAFAYNWSLEGWGCSREQALEHLLRLQRN
>NZ_AP019797.1|WP_161541109.1|1726192_1726567_-|hypothetical-protein
MACPVLLEFLLYIEGENDLEKDLEGLRQRLPEAEVNAWPGAFDLEVSCLIEVEAERIYDEVERICETIKSWARSHLNGREPYGSISWKVPRMLVGRMRIRYEEAREFMNRRRERICAQVQQLCN
>NZ_AP019797.1|WP_161541110.1|1726627_1726948_-|hypothetical-protein
MRTSYRFMLHYRGSNPELMPALIRALSQMGYGPVTGPAFIWTFEQPQLDQVLKKLQLRICRELARSGAPGEEVTVSYGPAAVAAGRVDLFGEELSPDLEGWPELSR
>NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein
MEPLQPKRTVNRVILLGRLAAPPEPVSEAGNVCQMVLTTQEQAIGPTGEPAVRLEPHLLQVEDAALRDFCLRHLTVGQILYVEGMLRRNEWPERNAMPVVVLVRKLLVASWDAGEPSA
>NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein
MNDFWYEEDFEFDDEFEGDPESGDYEGFQDLPDARDWEEDWDDEWDDWDDELDDGLATCDICGAPVGRYGYDDGYMTLCEDCRDQMYGD
>NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase
MVELSGEQQRILDQLLAWLDRPEAPPIFILTGSAGTGKTLLIRHLVQALHQRRIKYALAAPTGRAARLLADRTGEDARTLHSLIYILDRYQLIEEAEAQAEDPLSLRLHFALRSAELDARLIIVDEASMVGDVVGEQELYRFGSGRLLLDLLSYARLMPRRAGEVSSRLLFVGDPAQLPPVGQSISPALSAEYLRETFGLSAETAHLQTVFRQRKGHPILEAATALRNALENNRFHTFQLPAQPPDLRPVGIEEAIQIAAQDFERQTPSVLLCRTNALARKLNEAVRALLWGKESLPLQPGDLLLVNRNAPLYSLFNGDLVLVETVGPLEHRRVGRRGRPPVDLYFRDVILRYPHDNPRRRITCKLLENLLESPDGQLSPDLIQALLIDFYLRNRTLKPGSPEFHLELARDPYFNALHVRYGYAMTVHKAQGGEWRRAAVVFTDWKHFRHADFFRWAYTAITRAREELLTIDAPAFEAFSEMRWQPAASVPAAEQTAGSAARFPLKALETYHRRLTEALSAEGIETTDVELLQYAVRYHLSREDRTTRIQYYYRGNGQVSRIVTLGGADDPELTQQAYALFERILSEPPPASDELPENPLLREFLERARHRLEGSGIRIVNWKEMPYALRLYFSADGENATIDFYYNRRGVWTHAQQVGRSSSGSLFARIQLLLQSDG
>NZ_AP019797.1|WP_161541114.1|1730073_1731555_+|hypothetical-protein
MTTAISTEELRRFKALCQQKNFGQALPLARRFHPLLVQNVHLARQWGWVIYERLKDLAEQARAKQAPASRQANSLPEHLSRKIREALVEYARLPNLHTPDLLHAMILVMVCRIGIRWSGVLGFLYHVRAFDTLRPEDRLPKTYGDRTYPSIEQLLTQTVAAALAKLPLRDQRPEVLDWACVQVQQRLDRFPDEPWIPYHLACYLIKKQRGPDARPLLAPVLLQHRHKSWIWERVARANHDRPEHRLTALTQALRLAERELPAVRFRLHLELADLLATRQRHDEAAAQLQAARRLEEQLGRNVRDDRNPLWQRYRHMLQQPWFRQRAEQTNLPRTPTLTIEPEAMLYEHLPTTESSGVIIGHNSEKGLTIIRLSPSKIVCVKHRKFPDASRLEPGTVVWLRLVAEQVVALEPRPDHPLPDLVRWFRGRLLQPDGRAFAFVITGDEQRIFIPPRLNRKLNLEADATVEVLAERTIDPTKNTHSWSALKVKPVADQ
>NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein
MRVRFLLVRLPFQRSLVLVMQELEGQQRVGVVPVIAPGETFHDEQAYRIFQEVDAGRLPAGAEIVGEFEFPDEEAAQEAARRFAQDLKESLWGEEVAAQEQHAPSRVETVLLLTVGGSPEPLIRAVQRLDPSQSFVCFICSPDSRRLVETAGDAPNIPRAAGLPATHYAVEVWSDPDDLAGCVSALFALHRRIRSRFPEARVVANYTGGTKTMSAALVIGAVLLGWELQLNVGVRRDLRQVLAGTDVPMRVAADDVLLHLELRLLRQALDRYDYVAAAEIVRELLRTLSLSGARRTQVLRLYQIVQGLAAWDVGQYRQALVGFGMAGAHGSAWLPRLRTLAEAQKPGLEAVADLLLAAARRAHQGRYDDAVVRLVRAVELFGTVRLQQAHGIDIRHPDQARLPEVLRAEPAVSRDRWPGSPELSYHMLEALGDPVGQLFARRRSVLREALERCRDSLLLAGSAALDEQEYEAVRNRLEGFLHEAARVVAESLRAPQLPRSEVLEWVELGPAGA
>NZ_AP019797.1|WP_161541116.1|1735414_1738510_+|hypothetical-protein
MRNTCMVVFQAPVDPDRSPQSPPHRIWLHQDVLEFLHGRDASVRRLGIVLRQIAARGRPNRIKSCRTPENRGWLRTPMGGGGSGMHFYLWWAPSDSERVAPLVPSDNEVFLRTIRHHDNHDPLDCGQRHDYILLSLQELQTEHIDGVDCAPWTPEQRAFIDAGEVTRIVLGRPGSGKTASLWRAVERHPARHLLYLTWSRELAWQAHLNFSALAPGRTVRCWHFSRLLRAITQQDEPRLTLTESRRRFREALQLLSARQLGPWKQRLTALHAELRAFLIGRARPGHASTVFHRPVFHLRQEAYAGLRRDDRHPDAIEKAWHVFELLCRNEQLAEIFPELAAASQAIRILRAGRLPTILETIEGIVVDEVQDLTLLELSVVVELWHMLARRRSTPPLLLLAGDEGQTVRPSGFRWGPYKEWLSERIAPPRDYELGESLRCPANIARTFERAARYYSKLPREERPARQRRDTRAAPGGHLIYVAAENQQQATSLIQKLCDEESLVVVSLEDEVPEHIWSPALIKGLERQTVVVLNPGAVLERLDRFVAEEHFAFDREDYRTEVDRLRVALSRSSETLVFLDVAPTAAQRACSLRLLGDDVVEVPPHELLDNLEQAELSLLERIQARLEEFSVRIDDDPVQALRLALRARDLQLRIRSLGEHIPANIAREVPRAILLSIARLLTDDRVLPEVETPDLLQQAREAASELGPEHLRAFDELVRWHQSGRVFPAALLKAACRLTGEAEWLRQALSAIAYSLHAALERSARRPESAGVFLEDVAAWLRFLDYAGNLEEAVRQLRGLAFDALLAAGDLATAQQMLERIQPPDLLRKGRLLEAKNELEEAIEAYLQAGAYTEAERVRQRLYHFRNDTLRRFRHLADQCSALEQIPVLTSMLSGAQQRLATRYIQLHFEARKDASVQNTLYAFLSYLQAVHQHTDQLEDPELMMLGALEELTRRRHRACAAAAQLLFEHYGTRSMARRLLASPAGELPECSEPAVFCLAASTLETLRNCPPYQNLLAFIDHGKPTRRAAES
>NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein
MENRHAALLKAEQQIQEIAEELSRLRDATLLLTEAQHGVDQVLRSCQHLNDRVADLFEHLHAAASALQEAGFPELKASLDQMGTDIEKLQARQHEASRQLEALHQTLRYLHESIVQIVNGYNSLQATGERLQTDLESLMLATSQLADRIATIETRQQRSLWMLAVVAGLVLLTLIIMLWP
>NZ_AP019797.1|WP_162556495.1|1739205_1739421_-|hypothetical-protein
MEEAGSAAEVAGAGAVFHFFSSGGFAPGSLMEEESGRLQETLKALQTRVTLVLGTLGLIILLLLLLIFRTG

Crispr_ID: NZ_AP019797_11

• CRISPR_ID: NZ_AP019797_11
• CRISPR_location: 1732288-1733521
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 15 spacers
• Cas_protein_info: cas1,csx1

Consensus repeat of NZ_AP019797_11

Consensus_repeat	Method
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	PILER-CR

spacers of NZ_AP019797_11

>11.1|1732325|43|NZ_AP019797|CRISPRCasFinder,CRT
AGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCG
>11.2|1732405|52|NZ_AP019797|CRISPRCasFinder,CRT
TGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGA
>11.3|1732494|41|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
>11.4|1732572|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
>11.5|1732646|44|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
>11.6|1732727|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
>11.7|1732806|40|NZ_AP019797|CRISPRCasFinder,CRT
GCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACG
>11.8|1732883|63|NZ_AP019797|CRISPRCasFinder,CRT
CGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATG
>11.9|1732983|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
>11.10|1733058|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
>11.11|1733135|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
>11.12|1733209|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
>11.13|1733288|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
>11.14|1733364|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
>11.15|1733443|42|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC

CRISPR arrays and Neighbor proteins around NZ_AP019797_11

CRISPR arrays

The CRISPR arrays of NZ_AP019797_11

>merge|NZ_AP019797|11|1732288-1733521|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACAGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCTGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGACGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACAGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACTGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCAGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCCGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|11|11|1732288-1733521|CRISPRCasFinder
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|11|8|1732288-1733521|CRT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGGAGGTGCGGATAGCCAGGACCAGACCCACAACCAGAAATCG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGTTTGTTCAGTGTCCCGTGTGCGTGAATGACGTCAACGCCAAAGTCGTTGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

>NZ_AP019797|11|9|1732457-1732805|PILER-CR
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC


>NZ_AP019797|11|10|1732946-1733521|PILER-CR
	CTGGCCGTACAATATGCGGACGAGGATTGCGTAAGCGCCGT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGAGCTCGGCGATGAAGTTAGTTGAAAGGGAATGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TTGGCCCGCCGCGAGAGAGCCATCATGGCTTCGCCTTCTACCGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	ACGAATTGAAGCAGCTGAGGACATTCAGCAGCACTTCCTGCT
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACGCCGCCCGGGTTTCAGTCGAAAACTTGCCCGACGTAAACGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGACCGCCCCTCAGCAAGGAGAATTTGTGCGCCTCGGCGACCTCATCATTACCGAAGCGCGGGAATGGTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTGCTGAGCGGGCTCTATCCCCAGGCGAAACAGTCGAC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TCGAGAACAACCGGCGCTTCCAGAATCTCCACGTGTTCGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	AGCCAGCACGTCGTCCGACTGCTCGGCAGCACCTGGC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GTCTTCACGGTCCCCTTCAGCTTATCGAGGGCCACCGTAAGA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	CTCAGTTGTCGCCGTCATGGCTCGTCTCCGTTCGATTGG
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	TGGACCAGAGCGGCGAGTTGGACAATCTCCGGAGCATTCGCA
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC	GAGCCGTTGAGGAGAGTCTTCCGGCGGTGGTTAATTGAGGCC
GTCGTAATCCCCTTTTCATCGGGTCAGGTTTTCAGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_162556495.1|1739205_1739421_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541119.1|1740892_1741879_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|183621
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|376633
NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein	unknown	unknown	gnl|CDD|377317
NZ_AP019797.1|WP_012843837.1|1743158_1743422_-|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|340452
NZ_AP019797.1|WP_161541118.1|1739330_1739603_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	gnl|CDD|187878
NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|366099
NZ_AP019797.1|WP_161541120.1|1741863_1742670_-|acyltransferase	unknown	unknown	gnl|CDD|143601
NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|350691
NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein	unknown	unknown	gnl|CDD|236966
NZ_AP019797.1|WP_161541114.1|1730073_1731555_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541110.1|1726627_1726948_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein	unknown	unknown	gnl|CDD|377317
NZ_AP019797.1|WP_161541106.1|1722012_1722738_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541109.1|1726192_1726567_-|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541116.1|1735414_1738510_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_012843833.1|1739844_1740888_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_AP019797.1|WP_161542395.1|1742674_1743091_-|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|238385
NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein	unknown	unknown	gnl|CDD|274008

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	csx1	pfam09670_csx1_CAS-III	5.4e-46	151.9	0.0
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	1e-97	321.7	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1	gnl|CDD|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.60625e-122
NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	3.30234e-13
NZ_AP019797.1|WP_012843837.1|1743158_1743422_-|MoaD/ThiS-family-protein	gnl|CDD|340452	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins. MoaD, also termed molybdopterin synthase sulfur carrier subunit, or MPT synthase subunit 1, or MPT synthase small subunit, or molybdopterin-converting factor small subunit, or molybdopterin-converting factor subunit 1, is a conserved small sulfur carrier protein that has beta-grasp ubiquitin-like (Ubl) fold involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. MoaD is activated in an ATP-dependent manner by sulfurtransferases similar to the activation mechanism of ubiquitin-activating enzyme E1.	5.3299e-26
NZ_AP019797.1|WP_161541119.1|1740892_1741879_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|183621	PRK12607, PRK12607, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein	gnl|CDD|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	1.25878e-06
NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase	gnl|CDD|350691	cd17933, DEXSc_RecD-like, DEXS-box helicase domain of RecD and similar proteins. RecD is a member of the RecBCD (EC 3.1.11.5, Exonuclease V) complex. It is the alpha chain of the complex and functions as a 3'-5' helicase. The RecBCD enzyme is both a helicase that unwinds, or separates the strands of DNA, and a nuclease that makes single-stranded nicks in DNA. RecD is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	1.27887e-33
NZ_AP019797.1|WP_012843833.1|1739844_1740888_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.39744e-105
NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein	gnl|CDD|187878	cd09747, Csx1_III-U, CRISPR/Cas system-associated protein Csx1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; Some proteins could have an additional fusion with RecB-family nuclease domain; Core domain appears to have a Rossmann-like fold; loosely associated with CRISPR/Cas systems; also known as Cas02710 family.	4.9115e-35
NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein	gnl|CDD|377317	pfam04343, DUF488, Protein of unknown function, DUF488. This family includes several proteins of uncharacterized function.	1.98834e-21
NZ_AP019797.1|WP_161541120.1|1741863_1742670_-|acyltransferase	gnl|CDD|143601	cd07577, Ph0642_like, Pyrococcus horikoshii Ph0642 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup of the nitrilase superfamily. This superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. Pyrococcus horikoshii Ph0642 is a hypothetical protein belonging to this subgroup. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). This subgroup was classified as belonging to class 13, which represents proteins that at the time were difficult to place in a distinct similarity group. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	2.08035e-168
NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein	gnl|CDD|236966	PRK11747, dinG, ATP-dependent DNA helicase DinG; Provisional.	0.00322704
NZ_AP019797.1|WP_161542395.1|1742674_1743091_-|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|238385	cd00756, MoaE, MoaE family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor for a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), which carries the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase in the second major step in Moco biosynthesis. MPT synthase is a heterotetramer consisting of two large (MoaE) and two small (MoaD) subunits.	1.23368e-54
NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein	gnl|CDD|274008	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000214258

Protein sequences

>NZ_AP019797.1|WP_161541114.1|1730073_1731555_+|hypothetical-protein
MTTAISTEELRRFKALCQQKNFGQALPLARRFHPLLVQNVHLARQWGWVIYERLKDLAEQARAKQAPASRQANSLPEHLSRKIREALVEYARLPNLHTPDLLHAMILVMVCRIGIRWSGVLGFLYHVRAFDTLRPEDRLPKTYGDRTYPSIEQLLTQTVAAALAKLPLRDQRPEVLDWACVQVQQRLDRFPDEPWIPYHLACYLIKKQRGPDARPLLAPVLLQHRHKSWIWERVARANHDRPEHRLTALTQALRLAERELPAVRFRLHLELADLLATRQRHDEAAAQLQAARRLEEQLGRNVRDDRNPLWQRYRHMLQQPWFRQRAEQTNLPRTPTLTIEPEAMLYEHLPTTESSGVIIGHNSEKGLTIIRLSPSKIVCVKHRKFPDASRLEPGTVVWLRLVAEQVVALEPRPDHPLPDLVRWFRGRLLQPDGRAFAFVITGDEQRIFIPPRLNRKLNLEADATVEVLAERTIDPTKNTHSWSALKVKPVADQ
>NZ_AP019797.1|WP_161541113.1|1728028_1730065_+|AAA-family-ATPase
MVELSGEQQRILDQLLAWLDRPEAPPIFILTGSAGTGKTLLIRHLVQALHQRRIKYALAAPTGRAARLLADRTGEDARTLHSLIYILDRYQLIEEAEAQAEDPLSLRLHFALRSAELDARLIIVDEASMVGDVVGEQELYRFGSGRLLLDLLSYARLMPRRAGEVSSRLLFVGDPAQLPPVGQSISPALSAEYLRETFGLSAETAHLQTVFRQRKGHPILEAATALRNALENNRFHTFQLPAQPPDLRPVGIEEAIQIAAQDFERQTPSVLLCRTNALARKLNEAVRALLWGKESLPLQPGDLLLVNRNAPLYSLFNGDLVLVETVGPLEHRRVGRRGRPPVDLYFRDVILRYPHDNPRRRITCKLLENLLESPDGQLSPDLIQALLIDFYLRNRTLKPGSPEFHLELARDPYFNALHVRYGYAMTVHKAQGGEWRRAAVVFTDWKHFRHADFFRWAYTAITRAREELLTIDAPAFEAFSEMRWQPAASVPAAEQTAGSAARFPLKALETYHRRLTEALSAEGIETTDVELLQYAVRYHLSREDRTTRIQYYYRGNGQVSRIVTLGGADDPELTQQAYALFERILSEPPPASDELPENPLLREFLERARHRLEGSGIRIVNWKEMPYALRLYFSADGENATIDFYYNRRGVWTHAQQVGRSSSGSLFARIQLLLQSDG
>NZ_AP019797.1|WP_161541112.1|1727570_1727840_-|hypothetical-protein
MNDFWYEEDFEFDDEFEGDPESGDYEGFQDLPDARDWEEDWDDEWDDWDDELDDGLATCDICGAPVGRYGYDDGYMTLCEDCRDQMYGD
>NZ_AP019797.1|WP_161541111.1|1727206_1727563_-|single-stranded-DNA-binding-protein
MEPLQPKRTVNRVILLGRLAAPPEPVSEAGNVCQMVLTTQEQAIGPTGEPAVRLEPHLLQVEDAALRDFCLRHLTVGQILYVEGMLRRNEWPERNAMPVVVLVRKLLVASWDAGEPSA
>NZ_AP019797.1|WP_161541110.1|1726627_1726948_-|hypothetical-protein
MRTSYRFMLHYRGSNPELMPALIRALSQMGYGPVTGPAFIWTFEQPQLDQVLKKLQLRICRELARSGAPGEEVTVSYGPAAVAAGRVDLFGEELSPDLEGWPELSR
>NZ_AP019797.1|WP_161541109.1|1726192_1726567_-|hypothetical-protein
MACPVLLEFLLYIEGENDLEKDLEGLRQRLPEAEVNAWPGAFDLEVSCLIEVEAERIYDEVERICETIKSWARSHLNGREPYGSISWKVPRMLVGRMRIRYEEAREFMNRRRERICAQVQQLCN
>NZ_AP019797.1|WP_161541108.1|1723219_1723816_-|DUF488-family-protein
MNEVQPLFTVGYGTSSIEEFINVLKQYEIKCIVDIRSNPYSKFNPDFSIGTLKNHLEKNGIAYEYMGDTLGGKPTDESCLENDKPIFSVIKEKDFFKEGIRKLLSLWRYYQPQRIALMCACQYPDKCHRSKLVGQYIYETRSDNDIRIIHIYKDKNGEYKVIEQDKVILKIVSGQLNLFGFDFESKIAVSGKKIKKDA
>NZ_AP019797.1|WP_161541107.1|1722734_1723217_-|DUF488-family-protein
MIEQIFTIGVYGRDEDSFFDTLQQNKIDTFCDIRQRRGVRGREYKFVNKNYLCQKLDKLGIRYVYLKELAPPREVRAIQRAVDQKKSILKRQRTLLSHAFIEAYKQACLSKISPVDIFAKLPVDSKRIVFFCVEKDPRACHRSILTDWIEQKENIPVVHL
>NZ_AP019797.1|WP_161541106.1|1722012_1722738_-|hypothetical-protein
MNKIKVLIVARTRTNNDQMRCIGGLAWEENEAQCYSVRLMNPRDLYRGRIIRRGFKGFWDTSAPYRIGDVWELTVRELEQKIPPHVEDVIVEDAILLKKIRVSEMYDRILYMLQKSRLPILWRGDPNNLFDGKIQFNKNGKGYIDKNNVSKCSTGFWLPDKNLYKSYDSNNKLCYRYKADNNRLYYIPYVGVFSKTPPVIKEGSLIRVSLSRWHRETEMCWLMISGWFEPPHPRLSCDLYG
>NZ_AP019797.1|WP_161541105.1|1720327_1721905_-|CRISPR-associated-endonuclease-Cas1
MQAPYEGPCWPVAWVYEFAYCLRRGYYAWVEGPGEPVALSSGEGTWMAADGWCGPVQFIRDGHGSPVPVIRLAHVAESDTAERPEHLMLAALARLIEAETGQSVARGIVQYGPTGRQEVVTLDERLRAAWQRLDAEIRAVIHEGRLPAPRADQRCPACPRLEVCNPSGAAETAAQLNVLPPVRQARTLYVDEIGAVVRRDGRQLVVTVSRNGTRRELLRLPALLVDQVVLVGPVQITSQALRLLLRQNVDIVYLSTEGRFEGRLATEFHPHVALRLAQYEAARDPQRALPLARQFVRGKLQNMARLLRHYAQDYRNSTLEATAAAIESDLQHLSELKSPDAVRGLEGAATRRYFSVFNEMLRPEAHEPIDWPVFPGRNRRPPTDPVNATLGYLYALLLGNLVTACAVAGLDPYVGYLHTPAYGRPSLALDLMEEFRAPIADRLTLHLFNRGKLRPRHFEERSGGVYLNEEGRAVVLAAWQEWRQQVSRHPVLGLEMSQMRHFEAQARLLARTLQEPGAEYTPFVA
>NZ_AP019797.1|WP_161541115.1|1733705_1735247_-|TIGR02710-family-CRISPR-associated-protein
MRVRFLLVRLPFQRSLVLVMQELEGQQRVGVVPVIAPGETFHDEQAYRIFQEVDAGRLPAGAEIVGEFEFPDEEAAQEAARRFAQDLKESLWGEEVAAQEQHAPSRVETVLLLTVGGSPEPLIRAVQRLDPSQSFVCFICSPDSRRLVETAGDAPNIPRAAGLPATHYAVEVWSDPDDLAGCVSALFALHRRIRSRFPEARVVANYTGGTKTMSAALVIGAVLLGWELQLNVGVRRDLRQVLAGTDVPMRVAADDVLLHLELRLLRQALDRYDYVAAAEIVRELLRTLSLSGARRTQVLRLYQIVQGLAAWDVGQYRQALVGFGMAGAHGSAWLPRLRTLAEAQKPGLEAVADLLLAAARRAHQGRYDDAVVRLVRAVELFGTVRLQQAHGIDIRHPDQARLPEVLRAEPAVSRDRWPGSPELSYHMLEALGDPVGQLFARRRSVLREALERCRDSLLLAGSAALDEQEYEAVRNRLEGFLHEAARVVAESLRAPQLPRSEVLEWVELGPAGA
>NZ_AP019797.1|WP_161541116.1|1735414_1738510_+|hypothetical-protein
MRNTCMVVFQAPVDPDRSPQSPPHRIWLHQDVLEFLHGRDASVRRLGIVLRQIAARGRPNRIKSCRTPENRGWLRTPMGGGGSGMHFYLWWAPSDSERVAPLVPSDNEVFLRTIRHHDNHDPLDCGQRHDYILLSLQELQTEHIDGVDCAPWTPEQRAFIDAGEVTRIVLGRPGSGKTASLWRAVERHPARHLLYLTWSRELAWQAHLNFSALAPGRTVRCWHFSRLLRAITQQDEPRLTLTESRRRFREALQLLSARQLGPWKQRLTALHAELRAFLIGRARPGHASTVFHRPVFHLRQEAYAGLRRDDRHPDAIEKAWHVFELLCRNEQLAEIFPELAAASQAIRILRAGRLPTILETIEGIVVDEVQDLTLLELSVVVELWHMLARRRSTPPLLLLAGDEGQTVRPSGFRWGPYKEWLSERIAPPRDYELGESLRCPANIARTFERAARYYSKLPREERPARQRRDTRAAPGGHLIYVAAENQQQATSLIQKLCDEESLVVVSLEDEVPEHIWSPALIKGLERQTVVVLNPGAVLERLDRFVAEEHFAFDREDYRTEVDRLRVALSRSSETLVFLDVAPTAAQRACSLRLLGDDVVEVPPHELLDNLEQAELSLLERIQARLEEFSVRIDDDPVQALRLALRARDLQLRIRSLGEHIPANIAREVPRAILLSIARLLTDDRVLPEVETPDLLQQAREAASELGPEHLRAFDELVRWHQSGRVFPAALLKAACRLTGEAEWLRQALSAIAYSLHAALERSARRPESAGVFLEDVAAWLRFLDYAGNLEEAVRQLRGLAFDALLAAGDLATAQQMLERIQPPDLLRKGRLLEAKNELEEAIEAYLQAGAYTEAERVRQRLYHFRNDTLRRFRHLADQCSALEQIPVLTSMLSGAQQRLATRYIQLHFEARKDASVQNTLYAFLSYLQAVHQHTDQLEDPELMMLGALEELTRRRHRACAAAAQLLFEHYGTRSMARRLLASPAGELPECSEPAVFCLAASTLETLRNCPPYQNLLAFIDHGKPTRRAAES
>NZ_AP019797.1|WP_161541117.1|1738475_1739018_+|hypothetical-protein
MENRHAALLKAEQQIQEIAEELSRLRDATLLLTEAQHGVDQVLRSCQHLNDRVADLFEHLHAAASALQEAGFPELKASLDQMGTDIEKLQARQHEASRQLEALHQTLRYLHESIVQIVNGYNSLQATGERLQTDLESLMLATSQLADRIATIETRQQRSLWMLAVVAGLVLLTLIIMLWP
>NZ_AP019797.1|WP_162556495.1|1739205_1739421_-|hypothetical-protein
MEEAGSAAEVAGAGAVFHFFSSGGFAPGSLMEEESGRLQETLKALQTRVTLVLGTLGLIILLLLLLIFRTG
>NZ_AP019797.1|WP_161541118.1|1739330_1739603_-|hypothetical-protein
MERYAAAELKVPPVVRTGREWAGDFDLDLMAEHADGSWTIGECKWTQRPVGVEVLRELQSRWKRLVQRQRLPEQVRYFIFFPAAALRPDR
>NZ_AP019797.1|WP_012843833.1|1739844_1740888_+|LacI-family-DNA-binding-transcriptional-regulator
MAQRIRPKKKDKVTIYDVAREAGVAISTVSRVLNNSSDVSEETRQRVLRAIEKLQFRPDRTARTLAQKKTRVLAVAVTSFTTPFHNEILKGVRTAMENVDADLLLSDLGSKYPQQKLLNFLRRGAVDGLLVIGLPADEKLTLELRALHAPVVMVGYHHTDFDCFYWDDRVGARKAVEHLIACGHRRIGMIRSHTEGSLQLDRIAGYREALEAAGIPFDPELVRAGKTEKHAGFSEEAGYEAMQDLLKIEPRVTAVFASSDVQAIGAWKALREAGLRVPEDVALVGYDDIKISEYIGLSSVSQNMHAVGREATRLLVERVEGKRQDPPLEVLVVPQLKIRYSSDCGRA
>NZ_AP019797.1|WP_161541119.1|1740892_1741879_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MVSESLIRVQLDRTIRETNLQELGTPYRGKVRDVYTVDGHLVIVTTDRISAFDHILRQTIPFKGQVLNQLAAYFFRHTADLVPNHVEAVPDPNVTVARRCRPIPIEFVVRGYLAGHAWRVYRSGRRELCGKKLPEGLVQNARLPEPILTPATKAKEGHDEDISREEILTRGLLDAETFDHIEAMALALYRRGAEMAARRGLILVDTKYEFGIDDEGTIRLIDEVHTPDSSRYFYADEYEERLRKGLPQRQLSKEFVREWLMEHGFMGQPGQQLPDLPDDVRVEIARRYIEVYEQLTGEPFQPDTHPDPEQRIRENLAALPLLQAQLSR
>NZ_AP019797.1|WP_161541120.1|1741863_1742670_-|acyltransferase
MQVAYVQYNPAYLQVTQNLKQVEALLEGIEADLIVLPELFASGYFFRSHEDLEVVAEPIPEGPTTQWMIEWCRKTGTVMVGGLPERDGDRFYNSAVVVGPEGLIGRYRKVHLFYEEKLHFSPGNLGFQVFEVADRNGQPYRLGVMICFDWYFPEAARTLALQGADVIAHPSNLVRPDCPRAMPIRALENHVFTITANRYGTESNGRETLRFIGRSLICDPSGRVLQEAPAEGDQVGIAEIEPQEARNRRITPYNDLFEDRRPDCYRLS
>NZ_AP019797.1|WP_161542395.1|1742674_1743091_-|molybdenum-cofactor-biosynthesis-protein-MoaE
MHEPLPVAEAVSFLQTPEAGGLALFLGTTRRWTDDRETLSLFYEAYEPMALAEMGRLSDEALRRWPVRRLCLWHRLGDVPAGEISVLVGVATPHRAEAFEACRFLIDTLKRQVPIWKRETLSDGQNVWVEGIPESKPR
>NZ_AP019797.1|WP_012843837.1|1743158_1743422_-|MoaD/ThiS-family-protein
MSDAPQVRLRVLLFSTLRERLGSSELEVFVPAPATGSRLLDQLAAQYPAIAAYRPVVRLAVNQEYVPESVELHENDEIALITPVSGG

Crispr_ID: NZ_AP019797_12

• CRISPR_ID: NZ_AP019797_12
• CRISPR_location: 2072950-2077902
• CRISPR_type: TypeIII
• Repeat_type: I-A,II-B,III-A
• Spacer_info: 74 spacers
• Cas_protein_info: cas2,cas1,csm6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

Consensus repeat of NZ_AP019797_12

Consensus_repeat	Method
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRT
TATTTCAATACCAAAAAGGTGCGATTAAAACCA	PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	PILER-CR

spacers of NZ_AP019797_12

>12.1|2072980|36|NZ_AP019797|CRISPRCasFinder,CRT
CGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCT
>12.2|2073046|37|NZ_AP019797|CRISPRCasFinder,CRT
AAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTT
>12.3|2073113|36|NZ_AP019797|CRISPRCasFinder,CRT
CGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAAT
>12.4|2073179|35|NZ_AP019797|CRISPRCasFinder,CRT
CAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGC
>12.5|2073244|34|NZ_AP019797|CRISPRCasFinder,CRT
GCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGA
>12.6|2073308|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
>12.7|2073374|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
>12.8|2073440|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
>12.9|2073506|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
>12.10|2073572|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
>12.11|2073638|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
>12.12|2073703|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
>12.13|2073769|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
>12.14|2073836|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
>12.15|2073902|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
>12.16|2073968|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
>12.17|2074035|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
>12.18|2074102|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
>12.19|2074169|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
>12.20|2074234|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
>12.21|2074299|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
>12.22|2074365|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
>12.23|2074431|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
>12.24|2074498|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
>12.25|2074565|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
>12.26|2074631|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
>12.27|2074700|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
>12.28|2074766|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
>12.29|2074832|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
>12.30|2074898|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
>12.31|2074966|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
>12.32|2075032|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
>12.33|2075098|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
>12.34|2075164|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
>12.35|2075231|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
>12.36|2075298|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
>12.37|2075364|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
>12.38|2075431|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
>12.39|2075498|39|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
>12.40|2075567|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
>12.41|2075633|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
>12.42|2075701|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
>12.43|2075767|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
>12.44|2075835|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
>12.45|2075903|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
>12.46|2075969|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
>12.47|2076035|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
>12.48|2076101|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
>12.49|2076167|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
>12.50|2076235|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
>12.51|2076303|34|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
>12.52|2076367|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
>12.53|2076433|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
>12.54|2076501|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
>12.55|2076568|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
>12.56|2076636|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
>12.57|2076701|40|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
>12.58|2076771|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
>12.59|2076838|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
>12.60|2076905|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
>12.61|2076972|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
>12.62|2077039|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
>12.63|2077104|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
>12.64|2077169|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTG
>12.65|2077237|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AGAGAAGGGTGATGGGTTATAACCGCGGTAGATGAT
>12.66|2077303|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCG
>12.67|2077369|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
AATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGT
>12.68|2077437|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
ATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGA
>12.69|2077504|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGA
>12.70|2077570|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACC
>12.71|2077636|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
TGGTGGATTTTAGAAACAAACGTGTTCGACGACTAAC
>12.72|2077703|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCG
>12.73|2077768|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
CTGATCGAGGATGCGAAAAATGCGATGGCTGATTAAT
>12.74|2077835|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR
GCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGG
>12.75|2073048|34|NZ_AP019797|PILER-CR
ATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTT
>12.76|2073115|33|NZ_AP019797|PILER-CR
TTTGTCGAGGATGGGATAATTTTCGCCGAGAAA

CRISPR arrays and Neighbor proteins around NZ_AP019797_12

CRISPR arrays

The CRISPR arrays of NZ_AP019797_12

>merge|NZ_AP019797|12|2072950-2077902|CRISPRCasFinder,CRT,PILER-CR,PILER-CR
TGGAATATCCCAAAAAGGTGCGATTAAAACCGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCTATTTCAATACCAAAAAGGTGCGATTAAAACAAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTTATTTCAATACCAAAAAGGTGCGATTAAAACCGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAATATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAACTTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCATATTTCAATACCAAAAAGGTGCGATTAAAACATCTGTGGATCGTCGACTCTGAAATATCTGTACCGGATTTCAATACCAAAAAGGTGCGATTAAAACCTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTCATTTCAATACCAAAAAGGTGCGATTAAAACATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAAATTTCAATACCAAAAAGGTGCGATTAAAACAGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTGATTTCAATACCAAAAAGGTGCGATTAAAACGCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCAATTTCAATACCAAAAAGGTGCGATTAAAACAGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCGATTTCAATACCAAAAAGGTGCGATTAAAACTGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCCATTTCAATACCAAAAAGGTGCGATTAAAACCGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCGATTTCAATACCAAAAAGGTGCGATTAAAACAAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCCATTTCAATACCAAAAAGGTGCGATTAAAACCGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCAATTTCAATACCAAAAAGGTGCGATTAAAACCTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGACATTTCAATACCAAAAAGGTGCGATTAAAACTCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGTATTTCAATACCAAAAAGGTGCGATTAAAACTCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCCATTTCAATACCAAAAAGGTGCGATTAAAACGCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCTATTTCAATACCAAAAAGGTGCGATTAAAACCAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGCATTTCAATACCAAAAAGGTGCGATTAAAACGAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATCATTTCAATACCAAAAAGGTGCGATTAAAACTTGGAATCACTGTAATCATATCCCCAATCGCCCTTGTATTTCAATACCAAAAAGGTGCGATTAAAACCCAAGACGCTCAAGCGCATGATTGACATGTACCTGCGATTTCAATACCAAAAAGGTGCGATTAAAACCTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGTATTTCAATACCAAAAAGGTGCGATTAAAACCTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAGATTTCAATACCAAAAAGGTGCGATTAAAACCGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACCATTTCAATACCAAAAAGGTGCGATTAAAACCCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGCATTTCAATACCAAAAAGGTGCGATTAAAACTTCAGTTCGGACGACTCACGATCGCGTCCGGCATCGATTTCAATACCAAAAAGGTGCGATTAAAACCGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGGATTTCAATACCAAAAAGGTGCGATTAAAACCCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGAATTTCAATACCAAAAAGGTGCGATTAAAACACGACTGCTACGACTCGTTCACCACCCACGCCATAAATTTCAATACCAAAAAGGTGCGATTAAAACAGGAACGATGAAGCCATGAAAGCACATCTCTGCAGGATTTCAATACCAAAAAGGTGCGATTAAAACACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTTATTTCAATACCAAAAAGGTGCGATTAAAACGCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTCATTTCAATACCAAAAAGGTGCGATTAAAACTGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCGATTTCAATACCAAAAAGGTGCGATTAAAACAAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAAATTTCAATACCAAAAAGGTGCGATTAAAACCCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACGATTTCAATACCAAAAAGGTGCGATTAAAACTCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCGATTTCAATACCAAAAAGGTGCGATTAAAACATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCCATTTCAATACCAAAAAGGTGCGATTAAAACCGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATCATTTCAATACCAAAAAGGTGCGATTAAAACTGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGCATTTCAATACCAAAAAGGTGCGATTAAAACCGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACCATTTCAATACCAAAAAGGTGCGATTAAAACCAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTGATTTCAATACCAAAAAGGTGCGATTAAAACCTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAGATTTCAATACCAAAAAGGTGCGATTAAAACGGAGGCCGGAGATCGCCTCATCATCTACCATCCCGAATTTCAATACCAAAAAGGTGCGATTAAAACACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCAATTTCAATACCAAAAAGGTGCGATTAAAACTGAGGACATTGCCGGAAGCATTCAAAACAAACACAAATTTCAATACCAAAAAGGTGCGATTAAAACTGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTTATTTCAATACCAAAAAGGTGCGATTAAAACCCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAAATTTCAATACCAAAAAGGTGCGATTAAAACATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAAATTTCAATACCAAAAAGGTGCGATTAAAACGCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATCATTTCAATACCAAAAAGGTGCGATTAAAACTGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAGATTTCAATACCAAAAAGGTGCGATTAAAACACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTCATTTCAATACCAAAAAGGTGCGATTAAAACCTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAGATTTCAATACCAAAAAGGTGCGATTAAAACGAGGCTGGCGGGGATGGATGAAGAGGTGACGGTACATTTCAATACCAAAAAGGTGCGATTAAAACACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTGATTTCAATACCAAAAAGGTGCGATTAAAACTTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGAATTTCAATACCAAAAAGGTGCGATTAAAACCGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGAATTTCAATACCAAAAAGGTGCGATTAAAACCGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCAATTTCAATACCAAAAAGGTGCGATTAAAACCGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCACATTTCAATACCAAAAAGGTGCGATTAAAACTCCGTAATCGTCAGCTTACCGCCATACCTGACGCAATTTCAATACCAAAAAGGTGCGATTAAAACGGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCAATTTCAATACCAAAAAGGTGCGATTAAAACAAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTGATTTCAATACCAAAAAGGTGCGATTAAAACAGAGAAGGGTGATGGGTTATAACCGCGGTAGATGATATTTCAATACCAAAAAGGTGCGATTAAAACGCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCGATTTCAATACCAAAAAGGTGCGATTAAAACAATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGTATTTCAATACCAAAAAGGTGCGATTAAAACATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGAATTTCAATACCAAAAAGGTGCGATTAAAACTGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGAATTTCAATACCAAAAAGGTGCGATTAAAACGAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACCATTTCAATACCAAAAAGGTGCGATTAAAACTGGTGGATTTTAGAAACAAACGTGTTCGACGACTAACATTTCAATACCAAAAAGGTGCGATTAAAACGCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCGATTTCAATACCAAAAAGGTGCGATTAAAACCTGATCGAGGATGCGAAAAATGCGATGGCTGATTAATATTTCAATACCAAAAAGGTGCGATTAAAACGCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGGATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|12|12|2072950-2077902|CRISPRCasFinder
TGGAATATCCCAAAAAGGTGCGATTAAAAC	CGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGAGAAGGGTGATGGGTTATAACCGCGGTAGATGAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTGGATTTTAGAAACAAACGTGTTCGACGACTAAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGATCGAGGATGCGAAAAATGCGATGGCTGATTAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|12|9|2072950-2077902|CRT
TGGAATATCCCAAAAAGGTGCGATTAAAAC	CGAGGTCTTCCTCGAGGAAGGCTGGCGCTTCTCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTTTGTCGAGGATGGGATAATTTTCGCCGAGAAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGAGAAGGGTGATGGGTTATAACCGCGGTAGATGAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTGGATTTTAGAAACAAACGTGTTCGACGACTAAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGATCGAGGATGCGAAAAATGCGATGGCTGATTAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|12|11|2073015-2073180|PILER-CR
TATTTCAATACCAAAAAGGTGCGATTAAAACAA	ATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTT
TATTTCAATACCAAAAAGGTGCGATTAAAACCG	TTTGTCGAGGATGGGATAATTTTCGCCGAGAAA
TATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGAGAAGGGTGATGGGTTATAACCGCGGTAGATGAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTGGATTTTAGAAACAAACGTGTTCGACGACTAAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGATCGAGGATGCGAAAAATGCGATGGCTGATTAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGG


>NZ_AP019797|12|12|2073278-2077902|PILER-CR
	ATCGCCGGCCTTCCAGTAATCAGAAGAGGGCGTT
TATTTCAATACCAAAAAGGTGCGATTAAAACCG	TTTGTCGAGGATGGGATAATTTTCGCCGAGAAA
TATTTCAATACCAAAAAGGTGCGATTAAAACCAAGCTCGACCGCACGGCCGCCTTTGTGCGTGAGCATTTCAATACCAAAAAGGTGCGATTAAAACGCGACGGACGGGAGTGGTCCCCGCCTCGTGGAGAATTTCAATACCAAAAAGGTGCGATTAAAAC	TTTCGGCTACGGCCGAAATGCGCTTCTCCACCTCAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTGGATCGTCGACTCTGAAATATCTGTACCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGCACTTCTATCTCAAAGTCGCGCCTCAAATTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAAGTTGTTCGTCTATCCCAATAACGGAAGTAGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGTATTGCCGCACCGTCATTCGCCGGCAAACTTTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCTTGCGCCACCGGGGGCGGACCGGTCTCGTTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGCGCTGCCGCGCCAGTACTGGGCGACCGGTCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGTAAGCCGCCAGGGCGAAGTGCCGTGGCGGTTTGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGAGCATTACACCGTGTTCGCGTGGTATTCGCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGAGTCGCCGCGCCCGCTCCAGGCCCGGGTCCTCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTGCGCCACGACCAGCCATACAGGCGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGCAGGCCGTCCGGCGAGATCGGTATCCTTCCAGAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCTCGTCTGTGACGTCGCCGCCACGCTCTTCAAAGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGCCGGTTCGATCTTGCCTTCCTTAATGGCCGCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGCGGTCGGTAAAGCAGGACGGCTTCGATGCGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGATCAGCAGCCGGGCGCGCCGACCGGCCTTACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGCGCGTAGACACGCCGCGCTTCCGGCTTACAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTGGAATCACTGTAATCATATCCCCAATCGCCCTTGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCAAGACGCTCAAGCGCATGATTGACATGTACCTGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGGCAAAGCCCGGCGCGCGGACGTCGGCAAGCGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCGTAGCGCAAACGTCACACCATCGCCGCCCCACGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACCGACGCGCTTGTCGAGCAGCTTCAGCGCCACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCCTCCCTCTCTTTCTCTTCGCGCGTCTTCACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCAGTTCGGACGACTCACGATCGCGTCCGGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTGGAGCGCTACAAGAAGACGCTGGCCGATCCGGGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCGCGCCCGCCGTGCTGTGGATCGACGAGATTGAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGACTGCTACGACTCGTTCACCACCCACGCCATAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGGAACGATGAAGCCATGAAAGCACATCTCTGCAGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACCGCATACTCCGTATCATAGCGTCCCTCAATAGCTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGCCGGGCGGCCCGGTGATCTGCTCCAGGCCCGTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTTCGCTTTGCACTGGGCTACCTGCCCCGCATCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAGCTGAAGGGCTGGCGCTACCCGTGCGTCCTCCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCCGACGTAGTCCCCGTCGGAGTCCGCGTTGAGCACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCGATTTCCTGCTCGATGACTTCCTGGCGCGTGCGGCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATAGACGATCTGAGCCGGGCGGGCCGGACGATCCCC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTCCACCGAACGCGTGGAGATCGCCCGGATTCACATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGATAACGTAGCCTGGGAGCGGGCTTTTGACGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGTGTTCCTATCAGACCTACAGCGCATCCTGCAGAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CAGCTGAGATGGCAATGGTGACCAGGCCGCTCAGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGAGGGAGATCCAACCCATTGAGGAGAAGAAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGAGGCCGGAGATCGCCTCATCATCTACCATCCCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACACGACGGTGCGGCTTGCCGCGCGCGCCTGCTGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAGGACATTGCCGGAAGCATTCAAAACAAACACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCTGAGTCTGCTGCGTCTGCATGACTGTGCTGTGGTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCTTGCAATGCAGCCATCTACCAACCCAACCAAACAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATGGCTGGGAAGCGCCTACGACAGCGAGTTCGAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGCCCGCGCGGCATCTCGTGGTGGATTTTGAATC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAACGAGGTGAAGCGACTGGCCGCCTTTCTGGAGGAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGGGAGATCTCGCGTCAGAACGGCTCTCATGGCTTC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTCTCCGGGCGTACCCTTACGACGAACTGGACTTGAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGGCTGGCGGGGATGGATGAAGAGGTGACGGTAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACGAAGACGAGATCCATAATCCGTAAACGGTCAACGCGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCGATGAGCACGCCGCCGAAATCGAACTTGCGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGTGCTCAATGCCGATCCTATTGCCTACATCAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCGCTTTCTGCTGCTGTCCCGGTATCTGTCTGAGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGCGACGGCGTGCCGCGTATGTTGAAATGACTCAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TCCGTAATCGTCAGCTTACCGCCATACCTGACGCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGGCGCCGTGCCGTCGCCTGCAGCCACGACCGTCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AAACAGAACTCACCGCACCGCCCGCGCACGTTGTTGTG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AGAGAAGGGTGATGGGTTATAACCGCGGTAGATGAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGGAATACGTGCGTAGCCGCCCGCGCGGCATCTCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	AATCTCTCTGGCCTACCGAGACGGGGATCGTGTCTGGT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ATCTGTTCGAGGCGCCCGTATCTGTTGAGCTTGAAGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGAAGGAATTGTGAAGAACGCGTGAAAAATATGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GAGACCCGCGAGGGTCGCGTCTATCTGCACGTAACC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTGGATTTTAGAAACAAACGTGTTCGACGACTAAC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGTGTGGTGCGCGTTGGCTGCACCACCGCCCGCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTGATCGAGGATGCGAAAAATGCGATGGCTGATTAAT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCCGATCTTTGCCGCCGCGATGATCAAGGCGCATCCGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_012844123.1|2069331_2069622_-|GYD-domain-containing-protein	unknown	unknown	gnl|CDD|378038
NZ_AP019797.1|WP_161541362.1|2081426_2082509_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl|CDD|187792
NZ_AP019797.1|WP_161541352.1|2060329_2061640_-|histidine--tRNA-ligase	unknown	unknown	gnl|CDD|234586
NZ_AP019797.1|WP_012844119.1|2063414_2064521_+|M20-family-metallo-hydrolase	unknown	unknown	gnl|CDD|349902
NZ_AP019797.1|WP_012844126.1|2078163_2078430_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_AP019797.1|WP_161541360.1|2079510_2080200_-|ribonuclease-H-like-domain-containing-protein	unknown	unknown	gnl|CDD|99825
NZ_AP019797.1|WP_161541366.1|2085129_2087997_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl|CDD|187810
NZ_AP019797.1|WP_161541365.1|2084005_2085133_-|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	gnl|CDD|187879
NZ_AP019797.1|WP_161541357.1|2069942_2070728_-|glycoside-hydrolase	unknown	unknown	gnl|CDD|366751
NZ_AP019797.1|WP_161541355.1|2065939_2067868_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|223910
NZ_AP019797.1|WP_161541361.1|2080351_2081416_-|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	gnl|CDD|187873
NZ_AP019797.1|WP_161541363.1|2082606_2083029_-|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	gnl|CDD|378242
NZ_AP019797.1|WP_049772358.1|2061636_2062200_-|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl|CDD|334031
NZ_AP019797.1|WP_161541354.1|2064604_2065372_-|DUF1080-domain-containing-protein	unknown	unknown	gnl|CDD|368908
NZ_AP019797.1|WP_161541358.1|2070803_2072837_-|hypothetical-protein	unknown	unknown	gnl|CDD|377084
NZ_AP019797.1|WP_161541364.1|2083025_2083994_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl|CDD|274210
NZ_AP019797.1|WP_161541353.1|2062266_2063334_-|RluA-family-pseudouridine-synthase	unknown	unknown	gnl|CDD|223638
NZ_AP019797.1|WP_161541356.1|2068011_2069331_+|argininosuccinate-lyase	unknown	unknown	gnl|CDD|179143
NZ_AP019797.1|WP_161541359.1|2078431_2079514_-|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|274695
NZ_AP019797.1|WP_161541367.1|2087990_2088938_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl|CDD|187788

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161541366.1|2085129_2087997_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	6.1e-108	356.5	0.0
NZ_AP019797.1|WP_161541361.1|2080351_2081416_-|putative-CRISPR-associated-protein	csm6	cd09742_csm6_CAS-III-A:CAS-III-D	2.9e-46	151.8	0.0
NZ_AP019797.1|WP_161541365.1|2084005_2085133_-|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	cd09748_cmr3gr5_CAS-III-B	2.5e-70	232.3	0.3
NZ_AP019797.1|WP_161541363.1|2082606_2083029_-|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	pfam09701_cmr5gr11_CAS-III-B	1.9e-36	119.9	0.3
NZ_AP019797.1|WP_012844126.1|2078163_2078430_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	3.9e-27	89.0	0.4
NZ_AP019797.1|WP_161541362.1|2081426_2082509_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	2.1e-59	195.9	0.0
NZ_AP019797.1|WP_161541364.1|2083025_2083994_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	4e-81	267.4	0.0
NZ_AP019797.1|WP_161541359.1|2078431_2079514_-|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	9.6e-122	400.8	0.0
NZ_AP019797.1|WP_161541367.1|2087990_2088938_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	1.5e-26	88.0	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_012844123.1|2069331_2069622_-|GYD-domain-containing-protein	gnl|CDD|378038	pfam08734, GYD, GYD domain. This protein is found in a range of bacteria. It is usually less than 100 amino acids in length. The function of the protein is unknown. It may belong to the dimeric alpha/beta barrel superfamily.	1.28621e-25
NZ_AP019797.1|WP_161541362.1|2081426_2082509_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl|CDD|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.48592e-62
NZ_AP019797.1|WP_161541352.1|2060329_2061640_-|histidine--tRNA-ligase	gnl|CDD|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NZ_AP019797.1|WP_012844119.1|2063414_2064521_+|M20-family-metallo-hydrolase	gnl|CDD|349902	cd05651, M20_ArgE_DapE-like, M20 peptidases with similarity to acetylornithine deacetylases and succinyl-diaminopimelate desuccinylases. Peptidase M20 family, uncharacterized protein subfamily with similarity to acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase (ArgE/DapE) subfamily. ArgE/DapE enzymes catalyze analogous reactions and share a common activator, the metal ion (usually Co2+ or Zn2+). ArgE catalyzes a broad range of substrates, including N-acetylornithine, alpha-N-acetylmethionine and alpha-N-formylmethionine, while DapE catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelate (L,L-SDAP) to L,L-diaminopimelate and succinate. Proteins in this subfamily are bacterial, and have been inferred by homology as being related to both ArgE and DapE.	0
NZ_AP019797.1|WP_012844126.1|2078163_2078430_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	9.35167e-29
NZ_AP019797.1|WP_161541360.1|2079510_2080200_-|ribonuclease-H-like-domain-containing-protein	gnl|CDD|99825	cd05782, DNA_polB_like1_exo, Uncharacterized bacterial subgroup of the DEDDy 3'-5' exonuclease domain of family-B DNA polymerases. A subfamily of the 3'-5' exonuclease domain of family-B DNA polymerases. This subfamily is composed of uncharacterized bacterial family-B DNA polymerases. Family-B DNA polymerases contain an N-terminal DEDDy DnaQ-like exonuclease domain in the same polypeptide chain as the polymerase domain, similar to family-A DNA polymerases. This exonuclease domain contains three sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. These motifs are involved in metal binding and catalysis. The exonuclease domain of family-B DNA polymerases has a fundamental role in proofreading activity. It contains a beta hairpin structure that plays an important role in active site switching in the event of a nucleotide misincorporation. Family-B DNA polymerases are predominantly involved in DNA replication and DNA repair.	7.65625e-26
NZ_AP019797.1|WP_161541366.1|2085129_2087997_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl|CDD|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	6.24177e-86
NZ_AP019797.1|WP_161541365.1|2084005_2085133_-|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl|CDD|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.39774e-66
NZ_AP019797.1|WP_161541357.1|2069942_2070728_-|glycoside-hydrolase	gnl|CDD|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	4.95662e-24
NZ_AP019797.1|WP_161541355.1|2065939_2067868_-|HAMP-domain-containing-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	3.19412e-68
NZ_AP019797.1|WP_161541361.1|2080351_2081416_-|putative-CRISPR-associated-protein	gnl|CDD|187873	cd09742, Csm6_III-A, CRISPR/Cas system-associated protein Csm6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Protein of this family often fused to HTH domain; loosely associated with CRISPR/Cas systems; also known as APE2256 family.	2.34482e-45
NZ_AP019797.1|WP_161541363.1|2082606_2083029_-|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl|CDD|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	6.49329e-45
NZ_AP019797.1|WP_049772358.1|2061636_2062200_-|PTS-sugar-transporter-subunit-IIA	gnl|CDD|334031	pfam00359, PTS_EIIA_2, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.	2.39375e-41
NZ_AP019797.1|WP_161541354.1|2064604_2065372_-|DUF1080-domain-containing-protein	gnl|CDD|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	4.3292e-54
NZ_AP019797.1|WP_161541358.1|2070803_2072837_-|hypothetical-protein	gnl|CDD|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	5.32881e-10
NZ_AP019797.1|WP_161541364.1|2083025_2083994_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl|CDD|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.19937e-85
NZ_AP019797.1|WP_161541353.1|2062266_2063334_-|RluA-family-pseudouridine-synthase	gnl|CDD|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	4.67866e-117
NZ_AP019797.1|WP_161541356.1|2068011_2069331_+|argininosuccinate-lyase	gnl|CDD|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	8.85162e-168
NZ_AP019797.1|WP_161541359.1|2078431_2079514_-|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	3.26152e-157
NZ_AP019797.1|WP_161541367.1|2087990_2088938_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl|CDD|187788	cd09657, Cmr1_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	3.25634e-21

Protein sequences

>NZ_AP019797.1|WP_161541358.1|2070803_2072837_-|hypothetical-protein
MKSYLLVLLVGLLLVGCARETRPLRLAPIFSDHAVLQRQQPIRIWGWGAPGATVTVRLDTVTAQTEVDTEGRWLVELPPQEAGGPYTLAVESNGERRVVEDVLIGEVWVASGQSNMEMPLMPRLAGWSPGDSVYGAAEAVRTANYPQLRLLTVERAVALTPQDTFAGTWQVASPQTVATFSAVAFFFARRLHEALGVPVGIIHSSWGGTPAEAWTGRDHLRELEDFREIVARLEATEPVLHELEAWRSRLQQIAVPTGNDTTFWATLDLNDGRYAENPLPDTLTMSLPTRWENTEMGAFDGVVWFQRRVQVPEAWLGRDLVLELGPIDDMDRTYFNGQPVGGYERLGYWNTPRRYRVPAALVRRDNLIAVRVIDTQGGGGLWGQPEQLRLYPENEPQAAVSLAGMWHYWPVAELVGRRLYVFGEGSLSYTGRPKLPVSLGPNTPTTLFNGMIHPLIPYSIRGAIWYQGESNVGRASQYERLFPTLIRCWRTHWALGDFPFYFVQIAPYDYGPNARSQRLREAQLRTMLRVPHTGMVVTTDVGDDHNIHPARKREVGERLALWALANDYGFQDLVYSGPIYERMEREGTRLRLYFRYADGGLVLRPADGGEFVIAGPDRVFHPARVRVEGETLVVWSPRVPDPQAVRYGWSNTPHATLFNRAGLPASPFRTDDWPEGD
>NZ_AP019797.1|WP_161541357.1|2069942_2070728_-|glycoside-hydrolase
MKVMRAVLILSLLWLSGCDWLFPDGDNGKEPESEPEPTVELCGRWDARDVAGGRYRVINNVWGAETAQCIEVGLETGNFTITRADHDNGNNVAAYPAIYFGCHWGACTGNSGLPRRVQELSDVRTSWTLTPITTGRWNAAYDIWFSPSTNSSNGYSGGAELMIWLNWNGGVMPGGSRVATVELAGATWEVWYADWDWNYIAYRRTTPTTSVTELDLKAFIDDAVARGYIRPEWYLHAVETGFELWEGGAGLRSADFSVTVQ
>NZ_AP019797.1|WP_012844123.1|2069331_2069622_-|GYD-domain-containing-protein
MATYLIFTRLGPDSFKDPAEFRQLADRVSEEIRKRCPGVTWKDSYVTLGRYDIVDVVEANDQAEVERAAMIIRALARATTETMVATPWKEFLQRLG
>NZ_AP019797.1|WP_161541356.1|2068011_2069331_+|argininosuccinate-lyase
MLWDKGQSVAAWVQRFTVGEDYRWDTLLLPYDIEGTRAHAAGLHRIGILSGEEFQAVSEALDALQAEVAAGRVVVRPEDEDAHTVIETFLTERLGDTGKKIHTGRSRNDQVLAALRLFLKDGLREAGRQVARLVEQLCELGAAYNDALMPGYTHLQQAMPSTAGLWALGYAELLLSDLAALRHAYDQVDISPLGSAAGYGVPFLELPREEVAQRLGFRTLQLHVTAVQLSRGKLELHAAHALVQVGATLNRMASDLVLFNSQEFGFVELPPEFCTGSSIMPQKQNPDVPELVRAGYHRLLAEMNVLLTLPANLPSGYHRDLQLTKEAVIRCVLHAHDLLTAMVQLLPGLRFRRDRMQAACTPALLATAEALRRVAEGVPFREAYRQAAAALDSLPQPDPETVLRAYRVDGYPGRGRPDRLLEQLRAFQDWLTPTESAGT
>NZ_AP019797.1|WP_161541355.1|2065939_2067868_-|HAMP-domain-containing-protein
MSVLTRLKQASIRTKVILALLVPQVLVVLVTVLIWQGLRELRAAQDWVLHSHEVMQQARALALDRSEMEDFALAYLLSGAERFRDAYANQWRHFEQAVDALQQTVSDNPEQVTRLKQLAAAMQTWKQEMDELLARRPEVETGRLRMSQLAAEVVAQQESQEALQNRIASIQQAFLEAEQALNAERLARMERRERMVFIEVLVALLAVALGIGLAFQVIRRSVVGPVQELEAAAHRITEGDLETTVPVRAEDEVGKLARAFNQMVASMREALDALQEEKASVEQKVREAVAEIEAQQRYLAESVEHMLTQMERFAEGDLTVHLEVRKNDEIGRLYEGFNRAVANIRQMLVRVTEAIAATSSSAAQISASSEELAASAQQQAAQANEVAAAVEEMVRTIVENARSASETADVARANGDRAREGARVVQETVAKIRQIAQVVGESARTVERLGASSERIGEIVQVINEIAEQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTAQATKEIAEMIEGIRSETREAVKAIQRGSQEVEEGIALADQTGAALTQIVEGAQRVLDRVTQIAAASEEQSTTSDQISRSVEMISNLSHESARGVEQIARAAENLSRLTDELNEMVRRFRLAQREAVRSPDEAVSVA
>NZ_AP019797.1|WP_161541354.1|2064604_2065372_-|DUF1080-domain-containing-protein
MQRAMRRIILLATLWIINGGITKTMAQIDTTWAIHDMNRPRPPVVTPAPFDRPTAPPSDAIVLFDGTDLSAWERVGGGPAGWRVVDGYMEVVPGSGNIQTRQAFGDVQLHLEWSVPEDVTGEGQGRGNSGVFLMGRYEVQVLDSYQNDTYPDGQAAAIYGQYPPLVNAMRPPGQWQTYDIVFRRPRFDAEGRLLQPARMTVFHNGVLVQDCAVLTGPTAHRARPPYEPHPDRLPLMLQDHGDRVRFRNIWVRPLE
>NZ_AP019797.1|WP_012844119.1|2063414_2064521_+|M20-family-metallo-hydrolase
MSGSIAQAVATEVIELLKSLVRFPSLSHQEAEIADFVEHYVRQAGLPVRRMDNNVYFWLGEGEDRLLLNSHLDVVPPSADHPFDPFEPVEVDGKLYGRGTVDAKASGAAMTTALLSLAREGWRPPNGQVIVALTACEETGGGYNGLEALRPHLPPLQAAIVGEPTCLQPCVAQKGLLILKLHARGRTAHAARPHLGDNAILRAARDIQRLSRFRFDRADPFLGAPTLTVTTIQGGTAHNVVPEHCTFTLDIRTTPAYTHAEIVQLLAGVVESEIEVHSDRFIPVATPVDARIVQACLRANPGSRPFGSPTASDWIFLHDIPTVKLGPGPSERSHTGGEHIELDELVRAVRVYRDIIRHYYALGEESRA
>NZ_AP019797.1|WP_161541353.1|2062266_2063334_-|RluA-family-pseudouridine-synthase
MELQEVCIQLEVPPGYREGGRLDAYLARFLAQASRTKIQRGIREGRVTVNGVVVQKPSYTVQPGDVITLRILRPPPVEIVPEPIPLDIVYEDPYLIVINKQAGLVVHPARGNRSGTLVNALLYHIGSGPVRFDEEDDLPEDDEIGLSMVSTGPTEAKLEAPRPGIVHRLDKDTTGLIVVAKDDVTHTGLARQFEHRTIARTYLAIVWGVPDPPRGRIEAAIGRDPRDRQRMAVVPEDRGKRAVTHYEVVETLPAAALVRFKLETGRTHQIRVHARHIGHPVLGDPTYGGRTIRYGPHTPRRKAFYDQLFARLTRQALHAHTLGFRHPRTGEWLEFEAPLPEDMARALEQLRQDPL
>NZ_AP019797.1|WP_049772358.1|2061636_2062200_-|PTS-sugar-transporter-subunit-IIA
MIRFRKHRRTGEQTTPAPAEVRPEPAMQTSTSQIHQLLVPETIRVGLPGHTKEEVLNHLIDLLRGHPAVRDLEAVRQAVLARERMMSTGVGKGLGLPHAKTPAVTTTVAAFAITAEPVEFDAIDQQPVRLLFLLVGPEAAKSQHIKLLSRISRLMNRDGFRTRLLEARTPEEVLHLFEEGESQLVDQ
>NZ_AP019797.1|WP_161541352.1|2060329_2061640_-|histidine--tRNA-ligase
MSLEPTFRNIRGTFDILPQDGRSEGAHDMPSRAWQHVEQVVREVLERFNFREIRTPILEPTELIARGVGQLTDIVTKEMFAFRRGDTNYVLRPEVTAPVMRAYLQHRLDQQGAVQKLYYIGPCFRAENPQKGRYRQFHQFGVELIGAETPEADAEVIAAMMAVYEAFGLKNLRLRINTLGDAESRPRYREALRAYLQPLADRLTPTSRQRLETNPLRILDTKDERERRLLEGAPRIIDFVDEKGRAHYEAVKAHLQALGIAFEEDPFLVRGLDYYTHTTFELESPDLGAQSALAGGGRYDLLAMDLGHDAPVPAVGFAAGIERLFIALQAQGYAFPEEPPLDAYLVSLGEAAMRRALVEAQALRRAGLRVDLDLKGRSMKAQMREANRQQARYAVIMGDRELAEGRAVVRDMQSGQQQEVPLDELADFLKGAVRVS
>NZ_AP019797.1|WP_012844126.1|2078163_2078430_+|CRISPR-associated-endonuclease-Cas2
MPYYIAVYDVNVRRVAKMLKLFRRYLTWVQRSVFEGELTEAQFQRLQHEAGRLMNPDEDVVIFYELRDVRYSRRLVLGTEQGHRDRFL
>NZ_AP019797.1|WP_161541359.1|2078431_2079514_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MKRPYYIFSSGRLRRRQNTLFFEKAAGERIPDDQDETGEPSGTPTGERIPFPVEQVESLYFFGEVDLNSKLLTFLARHDIPAHFYDYYGNYTGTYIPRDYLHSGRLRIEQVLHYVRPKRRRYLARAIVEAATYNLLRVLRYYVNRLEGERREAVAEAIATIEQERTQLRSAEKIPELMGIEGRSREAYYSAWPSILADGPGEAFVFEKRERRPPSNEINALISFGNSLCYTTTIRQIHRTALDPTISYLHEPGARRFSLALDLSEIFKPILVDRAIFRLVKTGEITPRHFEERLGGVYLKEEGRRIFVRHWDERLRQTVYHRRLERHVSYERLIRLECYKLIRHLLDPKNEPYRGLHMWW
>NZ_AP019797.1|WP_161541360.1|2079510_2080200_-|ribonuclease-H-like-domain-containing-protein
MHYLALDIETCPLPADGYSAQQQARLAREVHFLRQREPEAHEEALAQRAASLHPLLSWIVCISVQRAVDDPFRPNPPHSYLAPTPDDEGAMLARFWRDVQQFVDLGEKILWITFNGKRFDVPFLLARTLHHGLLPVACGLLDDYPYKQYPHCDLFNLFAGINLGLADLCALLHIPSPKEHGDGSLVQHLLETEGIEGVRRYCEADVVATMACFARLLPLLPRDCQPPSS
>NZ_AP019797.1|WP_161541361.1|2080351_2081416_-|putative-CRISPR-associated-protein
MRTLLITVGTSLLTNARREFKKQELNDQEIANYLRHSSPEQASAETNSLSRLLQEGDKLIFLHSQTEEGHVCAEALRRYYDSEGYQAESLEIQDLTYAERRFKMRGLRSLVATLTELIRRERKQNREVLINATGGFKAEIAYATLVGLLFDVPVYYIHEAFRDIIEMPPTPIGWDYSLLAEYEEFFEWIHADYRDTREVENRLRGLPRTQEIHLLLTEEEGYTFLSPTGEAFYEAYQNRLEQAQGTPVWLSDSAWRTYEQAEPAVKALFDRTLAKLRLQELRRSGSDQVHNCDCFVFPKGHRDERLFYFEDEQGGIRVCELTRHSDQSYERAIQRGVRRSNYQNWRRFEVENRV
>NZ_AP019797.1|WP_161541362.1|2081426_2082509_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MADQVSGLQTCLNPGLWLDHFTEWQKPRGELKRTEASDKRQRIPRSFTLPELCQLLSAYRNRWDRMTDALRAQNYIVQMFTLCAASRVIVGLGAESVLETSIRLHRIYGFPVIPGSALKGVARAYAKLIEGKDENDPTFAEVFGKSPPKAQAGKVIFFDAIPANSANLTLELDVMNPHYAPYYQGTAPPADYHNPVPVFFLTIGPGSAFLFAVASREEKLAAQAQKWLIRALTKMGIGAKTVAGYGLWRECQRETRSSSDKEATESASSNTGLEPDRPEMLKELPRKQEERIPAEVVDNRQRPIKVRLLVAGYADRVIPCTGARNLESFRPGTFIWVTVSQRAKDGTIRQVSLSGLWKSR
>NZ_AP019797.1|WP_161541363.1|2082606_2083029_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MSTKSLQKTLEQKRAERAWTCVQEVLSQAQNLEDPESFKKKYNSLARKVPMLVLTNGLGQTLAFLKAKGKNDPANEHTVLFRHLSNWVVSQVAPSPTASNGDLLQWVLENDSVAYRRATTEALAFLTWLKRFAEAELPED
>NZ_AP019797.1|WP_161541364.1|2083025_2083994_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFDRAAILFLYTETPLHAGSGTSLGIVDLPIQRERTTGYPMIQASGLKGCLRDVAAGDTQKVEIVFGPETQRASDHAGALSVGDARVLLFPVRSLAGVFAWVTSQNVLARFKREAEMAGLQVNWEPIGPAPTDDGTAFVANGSGVVANGRVVLEEFAFTAQENNTVADIAKWFQDKAMPQGDEYTYWRESLEKRLVILPENAFRDFVQLSTEVIARVRIDDTKKTVERGALWTEEHLPSETLLYATLFASKPRVKDDELPDDWKQANDRVEKILEFVREAVDGKRLQLGGDATVGRGIVKVRFVEGQGQAQATSGTQTGGQP
>NZ_AP019797.1|WP_161541365.1|2084005_2085133_-|type-III-B-CRISPR-module-associated-protein-Cmr3
MSFALVIQPHDVLLFRDGKPFSAGTDIRARSLFPPTPFTIQGAIRARVLFSSGVSPAAYVSGKTQEAQKLQELIGTPKDSYGKLQLWGPFLANQENDRWVRYFPLPADIVRLSGSYALLQPLKKSPWQSNLPAGLQTPWLRTPERLEEVRGWISEDELGRYLGGVAPGKVYDESEFVEREHRFGIAIERARRTVRESYLYLAEFLRLKEGVAFWVDVEGISETDLGGKTGLLQLGGEARAAYYEVQQAAPDLIPTPPNPLPDRFKVVLLTPAWFSGGWQPQGGNWGQFFYGSVRLVSAIIPRYQPIGGAYVDDRRRRGAFQKPMRRFVPAGSVYFFEHDGTASWTGRPFTETPSGEGNYGQIGFGACAIGKWNYA
>NZ_AP019797.1|WP_161541366.1|2085129_2087997_-|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MVTRWTRKIVAFLHDPPGKALVLRSVPHTPHAQLAKALQQIALGRSADAHESDRATKADHIASAADRVNFPKGATAYWDQVAPLLTHPLAAGARAHRVQLPAGDLQALDSEVQEEAAQRILQPWVHQLTTQPDKEKCLYLYIWRLLYEELAHKASLKGWMRLLPADTRQPDHPLEQHLSISVAIADALPNPAFLVFSIGPVQEFIAAARRTQDLWMGSWILSYLSWKAMESLADEFGPDVVVFPSLRGQPLCDHWLHKAYGLPCQPALEEIGRPTFPNRFLALLPAKEASEAAQKAEKAVREEWKRLAQEVYNALTSTSILPADDQTKGLWDNQIQGLLEIYWVVFPWPGDDQPPGTAQAKAGKELYEQLCKPPEGEDWEFRRVYETLHKSGQYDPNWGTVWSLLYELADRAFNARKNLRNFEQAEETGDKCTQCGQRAALRSEKLDSRAFWDHVAKELRARGRHEVKPEGKERLCAVCTVKRFVQREVLEQEFGLRGGFPSTSEIAAAPFKKRVLEALQKGRPAVQQALKDFLNIAHPQLATVAQGAMPYLEAQTQSLTGAEAELAKKLLKIDGEWLHVESWTKEHLKEAGATSNPGDIRKAIETLQALYQAVGARPSKYYALLYMDGDHMGRWLSGTHEGLATFGDILHPEVREQLEEDANWHPLLQTRRLITSAVHAAISQSLGRFALRLVPHIVEERSPGRLIYAGGDDVLALVPLEDALAVARELRAAFSGHIRFENGSLQVCLGESVSGYVEWVEWGKEIFLTMGPQATASIGLVFAHHLQPLDLVLQAARRAEQAAKRQYGRNALAVEVLKRSGETVSVGTNWSYEGMPDVVKFLIDVTKRLREGQISGKWPYTVQAEAAALEALPEEAQRAELKRLLKRQAEQELSREEKEAQAEELSKKLVDWVRAMEQPQQNPDPCQADKESPKGFSEMSRWLLVCSFIARGGEV
>NZ_AP019797.1|WP_161541367.1|2087990_2088938_-|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MLTVRLETVTPLFLAGADPRGKPELRAASIRGALRFWLRALLGGVIGDKDLNALRKAEAAVFGSTDTGASPVVVRIGGEVQFDSYRPLLHNPEKKFTFMGIQPDQAFSLELIPRPPHTQVSPIVLSVTALWLLLGGLGKRSRRGFGTLRLQNEVESFLFTPEAYKDASELETTLRQVIQQAQDQARNLISTLKIAPGTFRIPPDFPVLHSDHTQILFCKYPFATWEKAMMAFWRLLRSHPYRDDRVFGFAGSAGRQASPLHLRIVKIGNKYHLLMTAFRSRFAWSSPNWRKLQDFLSDCCQKWQGTWIMRGTAAW

Crispr_ID: NZ_AP019797_13

• CRISPR_ID: NZ_AP019797_13
• CRISPR_location: 2273395-2274435
• CRISPR_type: Orphan
• Repeat_type: I-A,II-B,III-A
• Spacer_info: 15 spacers

Consensus repeat of NZ_AP019797_13

Consensus_repeat	Method
ATTTCAATACCAAAAAGGTGCGATTAAAAC	PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CRT

spacers of NZ_AP019797_13

>13.1|2273425|39|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
>13.2|2273494|39|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
>13.3|2273563|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
>13.4|2273631|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
ACAAACCGGTACGCTTCCGGATCTTCGTGCGCCATCA
>13.5|2273698|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGGCGTTCAGCACGTCAACATGCTGAAGGTAAATTT
>13.6|2273764|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TTCTGATCCGTTCCTTCGAGAACATCGAGATGATCGA
>13.7|2273831|35|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGACATCGGCCAGCTCCGTGAGCGCGTGGTGTCGC
>13.8|2273896|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGGGGGGTCCCGCCGCCGCCCCTTGCCCCCGCATCAAA
>13.9|2273964|35|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
>13.10|2274029|41|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
>13.11|2274100|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
>13.12|2274166|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
>13.13|2274232|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
>13.14|2274299|41|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
>13.15|2274370|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT
GCGATTACGGCACGACCTACTACTACTGGGTCACGG

CRISPR arrays and Neighbor proteins around NZ_AP019797_13

CRISPR arrays

The CRISPR arrays of NZ_AP019797_13

>merge|NZ_AP019797|13|2273395-2274435|PILER-CR,CRISPRCasFinder,CRT
ATTTCAATACCAAAAAGGTGCGATTAAAACTTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCAATTTCAATACCAAAAAGGTGCGATTAAAACCTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGAATTTCAATACCAAAAAGGTGCGATTAAAACTGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAGATTTCAATACCAAAAAGGTGCGATTAAAACACAAACCGGTACGCTTCCGGATCTTCGTGCGCCATCAATTTCAATACCAAAAAGGTGCGATTAAAACCGGCGTTCAGCACGTCAACATGCTGAAGGTAAATTTATTTCAATACCAAAAAGGTGCGATTAAAACTTCTGATCCGTTCCTTCGAGAACATCGAGATGATCGAATTTCAATACCAAAAAGGTGCGATTAAAACCGACATCGGCCAGCTCCGTGAGCGCGTGGTGTCGCATTTCAATACCAAAAAGGTGCGATTAAAACCGGGGGGTCCCGCCGCCGCCCCTTGCCCCCGCATCAAAATTTCAATACCAAAAAGGTGCGATTAAAACGGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCGATTTCAATACCAAAAAGGTGCGATTAAAACCGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCTATTTCAATACCAAAAAGGTGCGATTAAAACGCAATGCGGGACCCAGAACCGATCTGGGATCTCGTAATTTCAATACCAAAAAGGTGCGATTAAAACCCACCACGTCGTGAATCGCCGCCACGGAAGAGACAAATTTCAATACCAAAAAGGTGCGATTAAAACCGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAGATTTCAATACCAAAAAGGTGCGATTAAAACTGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACGATTTCAATACCAAAAAGGTGCGATTAAAACGCGATTACGGCACGACCTACTACTACTGGGTCACGGATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|13|13|2273395-2274435|PILER-CR
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACAAACCGGTACGCTTCCGGATCTTCGTGCGCCATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGCGTTCAGCACGTCAACATGCTGAAGGTAAATTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCTGATCCGTTCCTTCGAGAACATCGAGATGATCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACATCGGCCAGCTCCGTGAGCGCGTGGTGTCGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGGGGTCCCGCCGCCGCCCCTTGCCCCCGCATCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|13|13|2273395-2274435|CRISPRCasFinder
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACAAACCGGTACGCTTCCGGATCTTCGTGCGCCATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGCGTTCAGCACGTCAACATGCTGAAGGTAAATTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCTGATCCGTTCCTTCGAGAACATCGAGATGATCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACATCGGCCAGCTCCGTGAGCGCGTGGTGTCGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGGGGTCCCGCCGCCGCCCCTTGCCCCCGCATCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

>NZ_AP019797|13|10|2273395-2274435|CRT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTACTTCGCCAAAATATTCTTCCAGAATCCCAACAATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CTTCGATGCAGTCCAGGACGATCTCGGCCGTGCAGGTGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGCGCTTGATCTATTGCGTTATTATTTAACAGAAAAAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	ACAAACCGGTACGCTTCCGGATCTTCGTGCGCCATCA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGCGTTCAGCACGTCAACATGCTGAAGGTAAATTT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TTCTGATCCGTTCCTTCGAGAACATCGAGATGATCGA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGACATCGGCCAGCTCCGTGAGCGCGTGGTGTCGC
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGGGGGTCCCGCCGCCGCCCCTTGCCCCCGCATCAAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GGCGGCACCGGCCGAAGACGAGATCGCCCGTCCCG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGGTTGTATCAGTCGGCGGTTTACCGTGTTGCCGAATGGCT
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCAATGCGGGACCCAGAACCGATCTGGGATCTCGTA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CCACCACGTCGTGAATCGCCGCCACGGAAGAGACAA
ATTTCAATACCAAAAAGGTGCGATTAAAAC	CGCTCGCCAAATCATTTCGCGCTTGGGCGAGACGCAG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	TGGTTGTGATCGTCCCGCTGTAGTATCAGCTTGTCGTAACG
ATTTCAATACCAAAAAGGTGCGATTAAAAC	GCGATTACGGCACGACCTACTACTACTGGGTCACGG
ATTTCAATACCAAAAAGGTGCGATTAAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161541494.1|2276578_2277526_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NZ_AP019797.1|WP_161541485.1|2265935_2266862_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|132561
NZ_AP019797.1|WP_161541488.1|2268516_2269542_+|carbohydrate-porin	unknown	unknown	gnl|CDD|335962
NZ_AP019797.1|WP_161541498.1|2280975_2282070_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NZ_AP019797.1|WP_012844264.1|2265214_2265922_-|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|132557
NZ_AP019797.1|WP_161541499.1|2282084_2282894_-|TerB-family-tellurite-resistance-protein	unknown	unknown	gnl|CDD|143581
NZ_AP019797.1|WP_161541490.1|2270183_2271518_-|glycoside-hydrolase	unknown	unknown	gnl|CDD|366513
NZ_AP019797.1|WP_161541496.1|2278877_2279816_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|224054
NZ_AP019797.1|WP_161541500.1|2283035_2285825_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|223972
NZ_AP019797.1|WP_161541486.1|2267037_2268213_-|DUF4143-domain-containing-protein	unknown	unknown	gnl|CDD|224292
NZ_AP019797.1|WP_161541493.1|2275609_2276575_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|235136
NZ_AP019797.1|WP_012844268.1|2269903_2270158_-|DUF433-domain-containing-protein	unknown	unknown	gnl|CDD|377269
NZ_AP019797.1|WP_161541495.1|2277546_2278881_+|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_AP019797.1|WP_161541489.1|2269538_2269907_-|DUF5615-family-PIN-like-protein	unknown	unknown	gnl|CDD|375906
NZ_AP019797.1|WP_161541501.1|2285925_2287302_-|phosphoglucosamine-mutase	unknown	unknown	gnl|CDD|100096
NZ_AP019797.1|WP_161541492.1|2274940_2275597_+|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_AP019797.1|WP_161541497.1|2279823_2280969_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|378925
NZ_AP019797.1|WP_161541484.1|2263684_2265211_-|Gldg-family-protein	unknown	unknown	gnl|CDD|274627
NZ_AP019797.1|WP_161541487.1|2268361_2268526_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161541491.1|2271652_2273320_+|Zn-dependent-hydrolase	unknown	unknown	gnl|CDD|215425

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161541494.1|2276578_2277526_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.85721e-90
NZ_AP019797.1|WP_161541485.1|2265935_2266862_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|132561	TIGR03522, GldA_ABC_ATP, gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.4829e-128
NZ_AP019797.1|WP_161541488.1|2268516_2269542_+|carbohydrate-porin	gnl|CDD|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	1.7526e-37
NZ_AP019797.1|WP_161541498.1|2280975_2282070_+|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	2.20341e-31
NZ_AP019797.1|WP_012844264.1|2265214_2265922_-|ABC-transporter-permease-subunit	gnl|CDD|132557	TIGR03518, ABC_transporter_permease_protein, gliding motility-associated ABC transporter permease protein GldF. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldF is believed to be a ABC transporter permease protein (along with ATP-binding subunit, GldA and a sunstrate-binding subunit, GldG) and is linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldF abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	1.35707e-54
NZ_AP019797.1|WP_161541499.1|2282084_2282894_-|TerB-family-tellurite-resistance-protein	gnl|CDD|143581	cd07177, terB_like, tellurium resistance terB-like protein. This family consists of tellurium resistance terB proteins, N-terminal domain of heat shock DnaJ-like proteins, N-terminal domain of Mo-dependent nitrogenase-like proteins, C-terminal domain of ABC transporter ATP-binding proteins, C-terminal domain of serine/threonine protein kinase, and many hypothetical bacterial proteins. The function of this family is unknown.	1.47316e-06
NZ_AP019797.1|WP_161541490.1|2270183_2271518_-|glycoside-hydrolase	gnl|CDD|366513	pfam01204, Trehalase, Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi.	3.72698e-20
NZ_AP019797.1|WP_161541496.1|2278877_2279816_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.68332e-105
NZ_AP019797.1|WP_161541500.1|2283035_2285825_-|GNAT-family-N-acetyltransferase	gnl|CDD|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0
NZ_AP019797.1|WP_161541486.1|2267037_2268213_-|DUF4143-domain-containing-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	4.66751e-62
NZ_AP019797.1|WP_161541493.1|2275609_2276575_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	2.56687e-64
NZ_AP019797.1|WP_012844268.1|2269903_2270158_-|DUF433-domain-containing-protein	gnl|CDD|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	4.53993e-24
NZ_AP019797.1|WP_161541495.1|2277546_2278881_+|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.62743e-47
NZ_AP019797.1|WP_161541489.1|2269538_2269907_-|DUF5615-family-PIN-like-protein	gnl|CDD|375906	pfam18480, DUF5615, Domain of unknown function (DUF5615). This is a domain of unknown function found in potential toxin-antitoxin system component.	8.50628e-22
NZ_AP019797.1|WP_161541501.1|2285925_2287302_-|phosphoglucosamine-mutase	gnl|CDD|100096	cd05803, PGM_like4, This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_AP019797.1|WP_161541492.1|2274940_2275597_+|TetR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.23371e-12
NZ_AP019797.1|WP_161541497.1|2279823_2280969_+|ABC-transporter-permease	gnl|CDD|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	4.74806e-36
NZ_AP019797.1|WP_161541484.1|2263684_2265211_-|Gldg-family-protein	gnl|CDD|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	3.10326e-90
NZ_AP019797.1|WP_161541491.1|2271652_2273320_+|Zn-dependent-hydrolase	gnl|CDD|215425	PLN02791, PLN02791, Nudix hydrolase homolog.	8.36747e-128

Protein sequences

>NZ_AP019797.1|WP_161541491.1|2271652_2273320_+|Zn-dependent-hydrolase
MRRLPLLFALLLLPACETPETMPEASLDTVLTVPGASPEAQALLRKYAPFRLEADLSGLSDNQRRMLRLLIDAAREMDAIFKVQAYGNLDSLLATIEDPGLRRFAEINYGPWDRLDGNRPFIEGVGPKPPGANFYPPDMTREEFEAAAAENEALRSLYTMVRRDAQGRLVAIPYHEFFAPHVRRAAELLRQAAELAEDEGLHRYLTLRAEALLTDDYYESDRAWLDMKTNTIDVVIGPIETYEDQLFGYKAAAEAFVLLKDRAWSERLGRYATLLPELQAALPVPDAYKREQPGTDSDLGAYDALYYAGDANAGAKTIAINLPNDERVQLEKGTRRLQLKNVMRAKFEKILLPIADVLIAEDQRAHITFDAFFGNTMFHEVAHGLGIKHTITGRGTVREALRDLYTTMEEGKADVLGLYMVTWLIDRGEWEADPMDHYVTFLAGIFRSIRFGAASAHGRANLIRFNFFKEQGAFTRDAATGTYRVVPERMQTAVNALSEQILHLQGDGDYAATAAFIERYGQMDDTLRADLARIQQAGIPVDIVFVQGPEVLGLE
>NZ_AP019797.1|WP_161541490.1|2270183_2271518_-|glycoside-hydrolase
MSEPVVIDPEALIEQAKAVLRANDVNGIFVKPGTYQYPHQWNWDAALVALGLSHFDRPRAEQEIRSLLKGQWKDGMLPHVVYHNGASDYFPTPDFWQIERSPNAPEGVLTSGIVQPPLLATCVRLMHERAPDREASLAFVREIYPALYRWHRWLRTARDPENTGLVAIVHPWESGTDNAARFVEPMIRVIPTRVPAYQRKDFLHVREDERPIQAEYQRFIYLIDLFRQWGYDQETIYARSPFLVQDTLFNALMYRAQRDLRALAAELGEPTEEFDEWLATTRYAYNARLWSEEHGLYFAYDLRARRVLEENGCATFIPLFAGLASERQARRLVEEHLLNPEEYAPDGTRYYVPSQAKNNLFFEPRRYWRGPVWIIINWMVMEGLRRYGYHELAETIRQHSLELVQKSGFMEYYDPRDGTGCGATGFSWTAALTIEMLAGQPVPA
>NZ_AP019797.1|WP_012844268.1|2269903_2270158_-|DUF433-domain-containing-protein
MKARFPVPGLERITFDPEVMGGRACIRDTRVTVSLILNLLANGMQVHEILEAYPYLEPEDIHQALKYAAWLSEEWVVPLSPETP
>NZ_AP019797.1|WP_161541489.1|2269538_2269907_-|DUF5615-family-PIN-like-protein
MRFLADMGISPHTVRFLREQGYDAVHLRELKGQLLTDASILELARTERRILLTHDLDFGELMAASGARLPTVIVFRLRNMRPENVNRYLMGIIDRFGDQLRAGAMVSVTEAQVRIRSLPLSS
>NZ_AP019797.1|WP_161541488.1|2268516_2269542_+|carbohydrate-porin
MHLTPRTTLFFYGLGNQGGSISARVGDAQGVSNIEAPTSWRLYEAFVEHVTATGRLSVLAGLYDLNSEFDVLPAAGLFINSSFGIGAELAASRPQGPSIFPVTSPGLRVRLGFQRSARYAGYLQAVALDGVPGDPDRPAGTHIVFGRNDGLLLVAEAGALVHPEAPLPDGSPIRLVSRLHEHPHHHKLALGAWYYTARFRWLDADRTQRGNAGVYLLAESRLYREDPRTLWAFLRVGLAHPRVNRFGAYTGGGFSGRGWVPGRPADRMGLAVAAAHNSSAYRRLQRQQGTPVHRTEWVFEGTYLLALSTALRLQFDLQWVLHPDTRAGSVLVGGLRLLWSP
>NZ_AP019797.1|WP_161541487.1|2268361_2268526_+|hypothetical-protein
MLALWLGGWLLAADTSRFTSELAVAYTVDVMSPLAGASVRPVWMDNVDVTLACT
>NZ_AP019797.1|WP_161541486.1|2267037_2268213_-|DUF4143-domain-containing-protein
MIERHLLSEVLQGLQEVPAVCLLGPRQAGKTTLALRVAELIGGVYLDLESPRDLAKLSDPEAYLLLHLGELVILDEVHRVPGLFPILRGLIDQARRRGKRAGLYLLLGSASLDLLRQSGESLAGRVRYLELTPFFVLEPTDRPLEALWLRGGFPESLLAETELQSFRWRQDFIRTYLEREIPRFGTRLPAEMLRRLWVMLAHRQGGTLNAAELARNLGIDVRTVNRYLDLLVDLFLVRRLPPWHANVEKRLVRSPRLYIRDSGLLHALLDIIDMETLLSHPVVGASWEGFVIENLIASAPTGTTFYFYRTAGGAEIDLLIVWPDGRRWAVEVKRSLSPRPDRGFYAACEDVRPEKQFIVYPGSDRFPVGQGIEALPLIELARLLQAQKHTA
>NZ_AP019797.1|WP_161541485.1|2265935_2266862_-|ATP-binding-cassette-domain-containing-protein
MIEVRELTKRYGSEVAVDRISFTVRSGEVLGFLGPNGAGKTTTMKVITCYLPPTEGTVLVDGLDVRHDSLAIRQKIGYLPENTPLYPDMVTYDYLEFMAAMRGLDGAARRRRLAEVIEVCGLGDVLTKRIDALSKGYRQRVGLAQAMVHDPPILILDEPTSGLDPNQIVEIRSLIKTLGREKTVILSTHILPEVQASCDRVLIIHRGRIVADGTPDELQSTHGGQRILFGVQAPEPEVRSALERLDGVRVEEARTESDSTLLLRLSADGQKDLRPELFRLAVERGWTLTELHRERVDLEEVFRQLTMN
>NZ_AP019797.1|WP_012844264.1|2265214_2265922_-|ABC-transporter-permease-subunit
MREVWILTRRELRAFFDSPSAYIVLSVFLLITGWFFGNSLFVENVASLRSVFDLAPVLFMFFIPALTMGTFAEERRAGTIELLLTLPVRDGQVIAAKLLSVVIVLLVALALTGVYVLTLAVLGDPDNGATLGGYLGLALLGLSCSALGLLASSLTRNQIVAFILGFAMIFGLYLLDKVTIFVPGWLAPILEYLSIDFHYRNLMRGVIDSRDVLYYLSLTAFAGLLTAYHLARRPE
>NZ_AP019797.1|WP_161541484.1|2263684_2265211_-|Gldg-family-protein
MQRNWTTRTTLLLVGLILVVLNLIGLNVFFRIDLTDDRVYSLSEASIETVRSLDDPVTVRVFFTADLPAPYSSYRRFLRDKLDEYRAYGGNKFQYEFLDPGSDESLQQEAARYNIPPVQVQVIENDNLQIKNAYMGLVVEYAGKRETIPVIEDLSTLEYDLTSAIRKLTRDRLPVAGILTGHGEPGRTAMETFYRALERNYEVRTVSVKDSTLDPRPDVLFIIAPTDTFPEAHLKAIDRYLMEGGRVAVLLNRINANLQFGFASEQKTGLEDLLAHYGAVVRPDLVMDRQSSVVTLQRTVGFFRVAQMVEYPFFPIATRFNPEHPMVSRLREVFFYYVSSIDTSAALPEGVERIPLVYSTPQSATQQGFFTVQPAMLPDPENFRDGPYVLAVALHGTFPSAYDSTRIGQPARLVVVGDGDLVNEQRYGGQLPPGNLAFVLNIADWLGQDEALLAIRTKSITPRALEPVSESLRPFIKYANILGPVVLVVLFGLIRWRIRRQRQIVLTT
>NZ_AP019797.1|WP_161541492.1|2274940_2275597_+|TetR-family-transcriptional-regulator
MVSSETTPAAVRARILEAARRRFFREGYARVTMDELARELGMSKKTLYQHFPTKAALAAAVMEAFRAQVAEGLGRIFEDHTLSLPERLARAFAEAVRHLRQIEKPFLEDLARFLPDVWAETERFRSETIARLLGGALREGRAAGFIRTDVPVEIMLRSFQAVAERLVTPSALMELPYTLPEMIRLVIQLLFEGMLTDAARGDFRKALDAIASEGNLTP
>NZ_AP019797.1|WP_161541493.1|2275609_2276575_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRTLLLSAMLLSGLLAGCRAARTDVLEVSGTIEATEVQLAARTTGEIVQFFVDEGDRVARGQPLVCQDTTQLALQLRQAEADVAAARANLALLEAGARSEDLEQAEARLQQAETRLEQARRDAARLEALHAQGSATDRQLEDARLQLRLAEAEYRAAQAQLEKLRHLARPEELAVARARVAQAEARRDLLRRQLDDACLEAPIDGIVSRRVADPGELAAPGSVLLTLVRLDTVYVQLYIPEPLIGAVQYGQPVTVRVDTWPDRTFEGRVTYISPEAEFTPRNVQTKEDRTRLVFRIKVTLPNPEGLLKPGMPADATLQPGA
>NZ_AP019797.1|WP_161541494.1|2276578_2277526_+|ATP-binding-cassette-domain-containing-protein
MTPPIELRAVTKRFGPITALAGVSLSVSEGEMFGLVGPDGAGKTTLLRLVAGIARADEGVVRVLGHDLTTEARRIRPFIGYMAQRFSLYGDLTVEENLRFFARLHGTGTDRAWQERLLEMTGLAPFRTRLADYLSGGMKQKLALICTLVYRPRLLLLDEPTTGVDPVARRQFWELLVEFQQEGLTIVLATPYLDEAERCRRVALLHQGRILALDTPEALRASLPGRLFELTATPVREAARQLRAWLEAHRVQLIGNRIHLLLDHDDELTPLLGRLEAEGTVRVHDCQPIAPTLENVFLAYLTEQSTPSKQIDDVR
>NZ_AP019797.1|WP_161541495.1|2277546_2278881_+|TolC-family-protein
MLRWLPGLLLGCSLALALQAQPVQLTLSEAIQRGLRTHPDLAAAEAAVAAAQARIGQARAALQPRLQFSAGYQRLSEITPFAITMPLPGAEPIEITPNIPNQYQLQLSLQQPLFQGGRLRAQLEAARQEAAAAVAEQHARREALAYRIATAYWQHVEAEALARAAEENVRRLEAHLQDARNRQAQGLLLESEVLDVEVALEQARLEALRQRQAARLTAVTLSSLVGLPPDTPIRLSDRPDTALRPVPPLDSLRALALRRRPDLAALRHTIARADALQSMARAGWWPQVALVGRYLYARPNPRIIPLQDRFEGTWEVGLSLTLDLWNGLRTHHQVAEATALRRRAEAQEAATLRALDVALAQARLGVEQAYERLRLARLVVRQAEARYALVRDQFAQGLRTSSDLLDAETALAQARAREIQARTACALAWLALHQATGTLTEHLP
>NZ_AP019797.1|WP_161541496.1|2278877_2279816_+|ATP-binding-cassette-domain-containing-protein
MSIPAIDVRDLTRRFGSFTAVDHVTFQVEAGEIFGFLGANGAGKSTTIRMLCGLLPPSEGTARVAGFDVAREPYRVRQAIGYMAQKFSLYEDLTGLENLYFFGTAYGLTGRRLEARIREVTARVGLNGQERRLVRELPTGWRQRLALAGALLHEPSVVFLDEPTSGVDPLARRRFWDLIAELAAEGTTVFVTTHYLDEAEYCNRLGLIHNGRLIALGAPEALKARYLIRPLYELEATPLRAALETLRRMPEVFEADPFGSRIHVTLQDRSLDPELLVRRLREAGLTVAGIRPIVPTLEDVFLHLIEHPPTET
>NZ_AP019797.1|WP_161541497.1|2279823_2280969_+|ABC-transporter-permease
MAALRMIATLFVKEFTQIRRDPLSLGMLIALPAFLLILFGYALTFDVRNLSLGVCDQDGSAASRELIRRFAITEYFDLKRQVDDPRALTRLIDHEVIRVGLVIPPDFEERLEAGRPAPVQFLVDGTNATIASAVTGYADAIVRAFSGQVVLEQMLRAGHRPPPAAVSVEARIWYNPELESARFLLPGLIAFLLMVATVVATSLSVTRERERGTMEQLVLAPLEPYQLVLGKTLPYLLVAIGSTVLILLVGRLLFDVEVRGDLLVLAFVVLAYLLAGLGQGLLISTVAPSQQVAFQIAIISTLLPTFILSGFVFPIYNMPPVIQALTYLVPARYFLVALRGVMLKGTGLAVFWPDVLLLLLFAGLMLTLSSIRLRRLFQHLM
>NZ_AP019797.1|WP_161541498.1|2280975_2282070_+|ABC-transporter-permease
MEQVLAFLRKEFRQLRRDPRMLFLLIVPPIVQLVLLGYAANLDVRHVPLVVCDPVPSATSRDLVQRLVASTYFDLVGYEPDARRVGEWLDRGEATVALVFPPDFGKEVAQGTTASVQLLVDGSETNTATVALSYASQIIQHALGVGAVSAGVVPELRVWFNPALSSRWFIIPGLVGLLLTVMTTVLTALALVKEKETGTLEQLLVTPLRPATVLLGKLVPFLLIGLLDVLLVVLVATLWFQVPLRGSIPLLFGCALLFLLNTLGLGLLISTLSRTQQQALIGAAFFALMPMIILSGFVFPIESMPPVIQAVTYIVPLRYFLTIVRGIFLKGVGISALWEEMLALLVLGLLLFGLSTWRFRRQLH
>NZ_AP019797.1|WP_161541499.1|2282084_2282894_-|TerB-family-tellurite-resistance-protein
MSETRCMAGRLQELALLYLIAASREGLPVGDGRLEAVIDQLQARCPTIPPDQLRALVLEAFDVLLAAEDPEALLQATLEAVEPHLSQAQRQAVLHDLLRIVEADGIVMESERQLLELVARRWGLEPPYERVRVLDPGQEGIPEVLIHLALLYLVLAHGVDHELTRQERQIIVRKLRTWCPDLTDQQLAAVLQEAIDRYAEGLTEAELRVSAEAIKMALTPEQRLTAFHDLVQIANADGTFLDTEEDLLNELVDLWELGPHVEATELSPA
>NZ_AP019797.1|WP_161541500.1|2283035_2285825_-|GNAT-family-N-acetyltransferase
MEARPDVMQHDPSHELFLPRRLHLDAIFRPRSVAVIGASERPGSVGRTLLWNLISNPFGGTVYPVNPKRTNVLGIRAYPSVKDIPEPVDLAVIATPAPTVPGVVQECVEAGVKGAVIISAGFKEIGEEGRRLEEQILTIARKGGMRIIGPNCLGVMRPVTGLNATFASTMARPGTVGFISQSGALLTSILDWSLEENVGFSAFISIGSMLDVGWGDLIYYLGSDPYTKSIILYMESIGDARSFLSAAREVALQKPIIVIKAGRTEEAARAALSHTGSLAGSDEVLSAAFRRTGVLRVDSIADLFYMAEVLAKQPRPEGPRLTILTNAGGAGVLATDALVQGGGQLAELSEETKKKLDEFLPPHWSHGNPVDILGDADPERYAKALEVTLADENSDGLLVILTPQAMTDPTQTAEQLRRFAQSRKPILASWMGGVEVAAGKKILNRAGIPTFQYPDTAVRVFNYMWRYSYNLRALYETPSLPDDEIDGGPDRERAQQIIEQVRREGRTLLTEYEAKQVLEAYCLPVTPTRLARTADEAVAAAEELGYPVVLKLHSLKITHKTDVGGVQLNLDSPEAVRRAFETIRRNLEERGQADAFDGVTVQPMVRARDGYELIIGSTIDPQFGPVLLFGAGGTLVEVYRDRALGLPPLNTTLARRMMEQTKVYRALQGVRGRPPVNLDRLEKLMVRFSQLVVEQPWIREIDVNPLLAAPDQIVALDARIVLHPPDLREEELPRPAIRPYPRQYMSTWRLKDGTPVLIRPIRPEDEPLLVEFHHKLSERSVYLRYASLLKLSQRVAHERLARLCFIDYDREMALVAERRSPETGRPEILAVARLTKIYGTNDGEFAMLVRDDVQGKGLGTELLRRLIQIGEAEGLERIVADILVQNHAMQHVCRKLGFRIIRSDDPADPMVKAVRVLRVPVERESLAKA
>NZ_AP019797.1|WP_161541501.1|2285925_2287302_-|phosphoglucosamine-mutase
MAEKQVLIASISGIRGIFGAGLGPEELVRYAAAYGAWLRKQIGGRRPRVVVGRDGRVTGPVCARIVTATLQSVGCDVLDAGLATTPTVEVAVMAAQADGGIVLSASHNPAEWNALKLLNRHGEFLTPDEAREVLTLAEAGAMPLVTWEALGTYEARDFLDAHIQRILALDFMDPERIRRRQFRVVVDGINSVGAVALPVLLRRLGVAEVLLLNGEPNGRFAHPPEPLPEHLQETIRAVADTGADLGLVVDPDADRLALIADGGEYVSEELTQVIAADFLWRFREGPFVTNLSSSRAIEDVAARYGMPVYRAAVGEINVVQKMKEVGAILGGEGNGGVILPDVHYGRDALVGAAMVLQHLANLEQSLSELVATLPRYAIVKHKLPLDNLDADQALQRLAGRYAHARITTIDGLKIDLDEGWVHLRKSNTEPILRIYAEARTPDEAAALVQRFVDELRSV

Crispr_ID: NZ_AP019797_14

• CRISPR_ID: NZ_AP019797_14
• CRISPR_location: 3046457-3046553
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_AP019797_14

Consensus_repeat	Method
CGCTACAACGCGCCATGAAGACGATCGAACT	CRISPRCasFinder

spacers of NZ_AP019797_14

>14.1|3046488|35|NZ_AP019797|CRISPRCasFinder
TTATCTCAGAAACAAATATGGATCACCGGAAAAAA

CRISPR arrays and Neighbor proteins around NZ_AP019797_14

CRISPR arrays

The CRISPR arrays of NZ_AP019797_14

>merge|NZ_AP019797|14|3046457-3046553|CRISPRCasFinder
CGCTACAACGCGCCATGAAGACGATCGAACTTTATCTCAGAAACAAATATGGATCACCGGAAAAAACGCTACAACGCGCCATGAAGACGATCGAACT

>NZ_AP019797|14|14|3046457-3046553|CRISPRCasFinder
CGCTACAACGCGCCATGAAGACGATCGAACT	TTATCTCAGAAACAAATATGGATCACCGGAAAAAA
CGCTACAACGCGCCATGAAGACGATCGAACT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161542050.1|3033710_3034037_+|cation-transporter	unknown	unknown	gnl|CDD|225328
NZ_AP019797.1|WP_161542068.1|3062504_3063137_+|NTP-transferase-domain-containing-protein	unknown	unknown	gnl|CDD|133000
NZ_AP019797.1|WP_161542052.1|3034753_3036037_+|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_AP019797.1|WP_012844960.1|3062164_3062524_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161542053.1|3036040_3037762_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|379862
NZ_AP019797.1|WP_161542424.1|3055605_3056787_-|glycoside-hydrolase-family-88-protein	unknown	unknown	gnl|CDD|369381
NZ_AP019797.1|WP_161542062.1|3048725_3051368_+|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl|CDD|274529
NZ_AP019797.1|WP_161542057.1|3043724_3043985_-|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	unknown	unknown	gnl|CDD|198034
NZ_AP019797.1|WP_161542064.1|3052009_3053287_-|prolyl-oligopeptidase-family-serine-peptidase	unknown	unknown	gnl|CDD|223489
NZ_AP019797.1|WP_161542054.1|3037777_3040942_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_AP019797.1|WP_161542056.1|3043298_3043709_-|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350250
NZ_AP019797.1|WP_161542058.1|3044032_3045280_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_AP019797.1|WP_161542069.1|3063071_3063998_-|GTPase	unknown	unknown	gnl|CDD|379861
NZ_AP019797.1|WP_161542055.1|3042553_3043306_+|PepSY-domain-containing-protein	unknown	unknown	gnl|CDD|377032
NZ_AP019797.1|WP_161542063.1|3051566_3051932_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161542065.1|3053259_3055500_-|DUF4861-family-protein	unknown	unknown	gnl|CDD|379779
NZ_AP019797.1|WP_161542051.1|3034159_3034657_+|hypothetical-protein	unknown	unknown	unknown
NZ_AP019797.1|WP_161542059.1|3045296_3046010_-|thiaminase-II	unknown	unknown	gnl|CDD|381701
NZ_AP019797.1|WP_161542066.1|3056889_3058626_-|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|372761
NZ_AP019797.1|WP_161542067.1|3058663_3061678_-|TonB-dependent-receptor	unknown	unknown	gnl|CDD|273804

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542050.1|3033710_3034037_+|cation-transporter	gnl|CDD|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	4.40171e-17
NZ_AP019797.1|WP_161542068.1|3062504_3063137_+|NTP-transferase-domain-containing-protein	gnl|CDD|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	3.20045e-58
NZ_AP019797.1|WP_161542052.1|3034753_3036037_+|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	4.5625e-25
NZ_AP019797.1|WP_161542053.1|3036040_3037762_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|379862	pfam16576, HlyD_D23, Barrel-sandwich domain of CusB or HlyD membrane-fusion. HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.	5.4786e-102
NZ_AP019797.1|WP_161542424.1|3055605_3056787_-|glycoside-hydrolase-family-88-protein	gnl|CDD|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	2.17671e-123
NZ_AP019797.1|WP_161542062.1|3048725_3051368_+|ATP-dependent-chaperone-ClpB	gnl|CDD|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_AP019797.1|WP_161542064.1|3052009_3053287_-|prolyl-oligopeptidase-family-serine-peptidase	gnl|CDD|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	3.31123e-08
NZ_AP019797.1|WP_161542057.1|3043724_3043985_-|type-II-toxin-antitoxin-system-PrlF-family-antitoxin	gnl|CDD|198034	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain. This domain is found in AbrB from Bacillus subtilis. The product of the abrB gene is an ambiactive repressor and activator of the transcription of genes expressed during the transition state between vegetative growth and the onset of stationary phase and sporulation. AbrB is thought to interact directly with the transcription initiation regions of genes under its control. AbrB contains a helix-turn-helix structure, but this domain ends before the helix-turn-helix begins. The product of the B. subtilis gene spoVT is another member of this family and is also a transcriptional regulator. DNA-binding activity in this AbrB homologue requires hexamerisation. Another family member has been isolated from the Sulfolobus solfataricus and has been identified as a homologue of bacterial repressor-like proteins. The Escherichia coli family member SohA or Prl1F appears to be bifunctional and is able to regulate its own expression as well as relieve the export block imposed by high-level synthesis of beta-galactosidase hybrid proteins.	3.06904e-10
NZ_AP019797.1|WP_161542054.1|3037777_3040942_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_AP019797.1|WP_161542056.1|3043298_3043709_-|PIN-domain-containing-protein	gnl|CDD|350250	cd18683, PIN_VapC-like, Uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include FitB toxin of the FitAB TA system, eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The PIN domain belongs to a large nuclease superfamily. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	7.37439e-40
NZ_AP019797.1|WP_161542058.1|3044032_3045280_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.71815e-45
NZ_AP019797.1|WP_161542055.1|3042553_3043306_+|PepSY-domain-containing-protein	gnl|CDD|377032	pfam03413, PepSY, Peptidase propeptide and YPEB domain. This region is likely to have an protease inhibitory function (personal obs:C Yeats). This model is likely to miss some members of this family as the separation from signal to noise is not clear. The name is derived from Peptidase & Bacillus subtilis YPEB.	8.4323e-05
NZ_AP019797.1|WP_161542065.1|3053259_3055500_-|DUF4861-family-protein	gnl|CDD|379779	pfam16153, DUF4861, Domain of unknown function (DUF4861). This family consists of uncharacterized proteins around 400 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown. However, in many instances the domain lies upstream of a glycosyl hydrolase family, usually family 88, so it might be involved in carbohydrate binding.	6.00755e-119
NZ_AP019797.1|WP_161542069.1|3063071_3063998_-|GTPase	gnl|CDD|379861	pfam16575, CLP1_P, mRNA cleavage and polyadenylation factor CLP1 P-loop. CLP1_P is the P-loop carrying domain of Clp1 mRNA cleavage and polyadenylation factor, Clp1, proteins in eukaryotes. Clp1 is essential for 3'-end processing of mRNAs. This region carries the P-loop suggesting it is the region that binds adenine or guanine nucleotide.	4.52182e-50
NZ_AP019797.1|WP_161542059.1|3045296_3046010_-|thiaminase-II	gnl|CDD|381701	cd19366, TenA_C_BhTenA-like, TenA_C proteins similar to Bacillus halodurans TenA. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. This family includes Bacillus halodurans TenA which participates in a salvage pathway where the thiamine degradation product 2-methyl-4-formylamino-5-aminomethylpyrimidine (formylamino-HMP) is hydrolyzed first to amino-HMP by the YlmB protein, and the amino-HMP is then hydrolyzed by TenA to produce HMP. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect.	5.57354e-69
NZ_AP019797.1|WP_161542066.1|3056889_3058626_-|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|372761	pfam13860, FlgD_ig, FlgD Ig-like domain. This domains has an immunoglobulin like beta sandwich fold. It is found in the FlgD protein the flagellar hook capping protein. THe structure for this domain shows that it is inserted within a TUDOR like beta barrel domain.	5.52008e-08
NZ_AP019797.1|WP_161542067.1|3058663_3061678_-|TonB-dependent-receptor	gnl|CDD|273804	TIGR01782, TonB-dependent_receptor, TonB-dependent receptor. This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins].	4.83901e-96

Protein sequences

>NZ_AP019797.1|WP_161542059.1|3045296_3046010_-|thiaminase-II
MQQEAPVQERPFTVPPFAQECLEAAADAWGASFRHPFVRALAEGTLDAERFRFYQMQDARYLEAFADACSLIATRCVRPDDKLWFIDAARLALVVERELHAGYGKKLGYTLEDVARIELTPNNRAYQDHMIATAVRGTLVEAVAAITPCPWLYVELGQHLARELGTIPDTHPYADWLRMYSNPEFNTYMDNLLERLERFAREADDAARARAKEAFRTSVRYEWMFWQQAWEQQRWPV
>NZ_AP019797.1|WP_161542058.1|3044032_3045280_-|MFS-transporter
METASVRLGLRANWQQFALLVVVNAFVGAMVGMERAILPLLAEQEFGVASRVATLSFVASFGLTKALANLLAGRLGDRIGRRRVLLAGWLAGLPVPWLLMWAPSWAWVVAANVLLGVNQGLAWSMTVIMKIDLVGPRQRGLAMGLNEAAGYLAVSLAALATGYVAATYGLRPQPFYLGVVFSGVGLLLSALFVRETQHHADLEARQHFDASAPVPSFREVFVRTSWRDRRLFAVCQAGLVNNLNDGMAWGLFPLFFAALGYGLTQIGWLAALYPAVWGLGQLVTGALSDRIGRRPLIVGGMLLQGVSIGAMLFSDVFAWQAAAMVGLGIGTAMVYPTLLAVIGDVAHPAWRSTAVGVYRLWRDGGYVVGALLAGVLADALSIPWAIGAIAALTLLSGGVAATTLAETRPQTYKEL
>NZ_AP019797.1|WP_161542057.1|3043724_3043985_-|type-II-toxin-antitoxin-system-PrlF-family-antitoxin
MTIARVSKKGRITLPKAVREHLQLKEGDPVQFEIRSDGTVILHRASESVYAARGTLHTFAPKKPVSVEEMDQAIGEEVTRQFRTST
>NZ_AP019797.1|WP_161542056.1|3043298_3043709_-|PIN-domain-containing-protein
MPQFSGGLDTNVLVRYLVEDDPIQAEAARRYIEEQCSVDRPALVHPVTLCELVWVLRAAYNVPRQRIAEAIDALLDTPTLYIMEAELVRGALQLFRSSSVDFADAYQHVAYQKAGAAGLVTFDRRVGRLTGAQVLT
>NZ_AP019797.1|WP_161542055.1|3042553_3043306_+|PepSY-domain-containing-protein
MRLPVRTIRKLHRYLGLIIGIQLLLWTGSGLFFSLNPIEKVRGEHLMAPPPVLAPDDTLLATPTRALQELRRRFPEAEVLQVMLRPLLDRPVYELMFRHEGRLRFALADARTGRLRPPITEAEAVAIAQADFVPEAPIAAVEYLTEAPPGSEFRGSPLPVYRVVFDHPTGTRIYVAAENGRVTARRNDTWRWFDFFWMFHIMDYRTRDNFNHLLLQSFSLFGLLTVLSGFVLWAVTSPTLRGRRRKSPPT
>NZ_AP019797.1|WP_161542054.1|3037777_3040942_+|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MIERLITWSAHNRLLILTLTLLISALGLWATLNTPIDAIPDLSDAQVIIRTEYPGQAPQIVEAQITYPLATAMLAVPGARTVRGYSMFGTSFVYVIFEDGTDLYWARSRVLEYLNQVTLPEGAQVSLGPDATGVGWVFQYSLIDTTGRHDLADLRALQDFFLKYELQSIEGVSEVATVGGFLKQYQVVVDPQKLLAYGISIDQVRQAIAHANQEVGARLLELGEREFLVRIPGYLQGIDDLRQTPLKAQNGTVITLDDVARLQVGPELRRGISERDGEGEVVSGIVVMRYGENALRVIERVKARLAELQASLPEGVKVVVDYDRSRLIREAVHTATIKLWQELAVVALIVLVFLLHVRSAFVALVAVPVGVLISLLIMYLLDINANIMSLGGIAVAIGVMVDASVVMVENAHRHLERLRAQHNRPLRHSEHMQAVLEAAREAGPSLFFSLLVVTLSFLPVFALQNIEGRLFRPLALTKTFAMAAASLLAVTLVPALMVVFVRGKIRPAAQNPLTRLLTQMYQPVIRYALRHPWQVIVGSLLLLGLTLLPVQRLLWGRVAIPFPQIGSEFMPPLNEGDLLYMPTTLPGLSPQKAKELLQLSNRIIKSFPEVASVTGKAGRAETATDPASLSMFETIIQLKDPREWRPGVTLDRLIEEMNRALQIPGVTNAWTMPIKNRTDMLATGMRTPLGIKLMGPELATLDRLGTTLESLLRNMPGTRSVYAERATGGSYLNIVVNRAEAARYGLTIGKVLDVAQAAIGGLHVTTTIEGLERYPVLVRYPQDLRDNLPALRQVLVPTPSGAQVPLGQLAHFELTEGPPMIRSENARPTVWVYIDLAPGVDIGTYVQQAQQLLARELSLPPGYALVWSGQFEYMERANRRLQILGPLTLGLVFLILMLHFGNLREPLMLLSTLPFAAIGAVWLMVALAFDMSVAVAVGYIGVVGLAVETGVVMLTFLDEAVRRYRQAGQLSTIEQLRAAIEEGALLRLRPLLMTVSTTLIGLLPIMFGTETGAEVMKRIAAPMVGGLFTAAALTLVVLPALYLLVERYRWQRRT
>NZ_AP019797.1|WP_161542053.1|3036040_3037762_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MRPRILLVSSLLGLLLIAYLARSLWRSDSSATPAPADTAMATAPATGGLAAFDKNGDGIVYQDPMHPWIVQDAPGKAPDCGMDLVPVSVHEGMDMSDEGTVRIDPVVLQNTGVRLTTVEVAPLAPTVRATARLEVNEQQLVAVSPKIEGWVERLYVDYEGARVRKGEPLLEIYSPALVSTQEEYLLALRNVQQLAGTPAEADARRLLEAARRRLQFWDITDEQIRQLEATGQPRKTLTLYAPASGTVLEKHVVEGQQIRSGQTLFVLADLSTLWLQVDVYEHDLSWIKPGITAEITLPYDPTVRLQGRVDYMYDTLNPETRTARARIVVPNPGLRLKPGMYALATLQGQPTPPRPRIPTEALVRYGAEAWVILALGEGRFRPVRVQPGLEAQGYVQILEGLEGGEQIVARAQFLIDSEARLKQALAAFMGGHQHGATPAPETQLQPSPRAPEHQEHGTSPAPKTQPQPLPRMPEHQGHSANQDTTVVSLRIDANGFVPSRIEVPSGRPVRLTVTRTTDQTCATAIQFPELGIGPVDLPLHQPVTLTFTPARAGAYLFTCGMNMLKGTLLVHAN
>NZ_AP019797.1|WP_161542052.1|3034753_3036037_+|TolC-family-protein
MHRRYFVLISLFFILTIPARAQRPDTLLSLSALLQEALQANPALQAARLQAAARATRPTQVGALPDPSFEAGYRPLAIGDVEGLAPASALLMQRVPFPGKLGLEAEAARLEAEATAREADALALRLAYALRTTYYELYRLQETRRLIEDFQARLRAFAEAAAVRYEVGQGSQAAVLRVQLEQHRLSRQLLDLQGAWRARYAQLIQLTGRTDLPDTARLAPPEPPTLLPSIPLAEAFRRHPEALALRIREDRARTLIRRARREYWPDFVVGVGLMDMMRMNQPVAPLSALRDRFAIRVGVVLPLQRARRSARVEEARLEARTLASRYRDLRNLFESRWRALEARFAADRANLALLEQTLIPEARTTREALLSAYTTGQASYLDLLDAERALFELERQRVDTITRLLVTQAEAEQLLGLLPENINQTGE
>NZ_AP019797.1|WP_161542051.1|3034159_3034657_+|hypothetical-protein
MSRWFRYGIQGVAAGLAALLLTGAFHLLTPACTMPIRDVTPPVACAAMPDVQTHPSAPTCTTSEPAPCCTEEQPLLSTRQPVPSCSHALGAAKSRLPVSTPRPLRPDRARPCARKARLPCCNALGTAKSRLPVSTPRPLRAPAASPILTVTPPVPLHVQFAVLLI
>NZ_AP019797.1|WP_161542050.1|3033710_3034037_+|cation-transporter
MDTTAWIVTLIGLAAMAWVVWYFWLSEPKRQPATQPEKTAMKTQETFQIEGMSCQHCVHAVTSALKKLPGVEVQSVEIGRATVAYDPAQVSRDQLKAAIEAEGYTVVS
>NZ_AP019797.1|WP_161542062.1|3048725_3051368_+|ATP-dependent-chaperone-ClpB
MNLQKFTVKAQEAVQRALEIAAQKNHQAIEPPHLLKALLSEPQGTAVSILKRLGASLELLNTKTDQALAKLPVVHGASVSGQYVGNELKKVFDRALAEAGLLKDEYVSTEHLLIALAESQTDVGQALREQGVTKEKILNVLKDVRGAQRVTDPHAEERYEALQRYGRDLTELARKGKLDPVIGRDEEIRRVLQILSRRMKNNPVLVGEAGVGKTAIVEGLALRIVQGDVPESLKDRRIVALDMGALLAGAKYRGEFEERLKAVVREAAASEGQVILFIDELHTVVGAGAAEGAVDAANILKPALARGEIRVIGATTLDEYRKYIEKDKALERRFQPVLVEEPSVEDTISILRGIKDRYEVHHGVRITDGALIAAAELSHRYITDRHLPDKAIDLIDEAAARLRIEIDSMPEELDQLERQIRQLEIEREAVKRDNDQEKLKAINEQLANLEEQRRALRARWQQEKELIQRIRSIKEEIEQLRIESEQLERQGEYGRVAEIRYGRIPELEKQLKEAQQQLEEVQKDGALLKEEVTAEDIAEIVARWTGIPVSKLLESEREKLLRLEEELSKRVVGQPEAISAVANAVRRGRAGLQEPNRPIGSFIFLGSTGVGKTELAKALAEALFNDENAMIRIDMSEYQERHSVSRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEIEKAHPEVFNILLQVLDDGRLTDNKGRTADFRNTIIIMTSNLGSELIRERIDAFGGEVPPEVYERMREEILQLLRQRLRPEFLNRIDEIIVFRPLGHEEIRKIVEIQFARIQQLAARSHKLKLELTDAAKDWLAERGFDPVFGARPLKRVMQREITNKLAEEILAGFFTDGDTIRIDVAPDGSGLIFEKIAQVEAEPAGTA
>NZ_AP019797.1|WP_161542063.1|3051566_3051932_+|hypothetical-protein
MRMLKSLFALLLIGMLSAGLSPNAAQAHPKRVVKVLPHGHVVVHVGKVRYHYHAGVFYRPVRGGFVVVRAPVGAIVPVLPVAYRVVHVHGRVYYCHNGVYYRPIRHHGRTAYMVVDLHLDL
>NZ_AP019797.1|WP_161542064.1|3052009_3053287_-|prolyl-oligopeptidase-family-serine-peptidase
MDALARPRLKTVGLDRRTFLEALLGTAALGWRRWTPPEDYEAPARDAEAGSVLGAYGDWAAALAEDPPRLSLRWQETVDLAAWRQQARARVLALLGMPEPGAVLHAEVVARVAHDGLIIEDLRWQLPFGPPTRAYLLRPADASGPLPGVLALHDHGGDKFFGREKIVDPGTRHPLMVAHQEKLYDGRAWANELARRGYVVLVPDVMAFGSRRIRLADVPPRVRRGLPAREPETAEEIRAYNEWASWHEHMVARSLLAAGTTWPGVLLAELRGALDVLCRRPEVDARRIGCAGLSGGGWQTVLLAGMDERIRCAVVTCMLTTWRDLARNRSYTHTWMLYIPLLARDLDYPELLGLRVPAPTLVQCGRRDPLFTLPEMERAVQILQEVYRRAGAPTHFQGLFYDEGHRFNRSMQEDAFAWLDRWLHG
>NZ_AP019797.1|WP_161542065.1|3053259_3055500_-|DUF4861-family-protein
MRWCRILLLGLLPLLGGAVETPEAVRVRVENPSDVARPDELVELAWAPLAERLPALTPEQVRVRDEASGRSVLHQVVDNDGDGRPDVLLFLVSLWPREARTYRVEAAAPETTFAARAFAYHEPQRDDVAWESDRVAYRTYGQGLWQLESLVSSGIDVWLKRVRNLVITRWYAKGHDAYHIDTGEGADFFSVGQSLGAGGTAIWHEGRLFPARNFKSYRILAAGPLRAIVELHYEPWEVGGRQVSEVRRITIDAGQYLFREEVTFRAADSEPLTYAIGLVKREGVTGAWKQRDDWTWLGVWGPVERKNGGHGELGTAVLMPGDRLEAVRETNDHYLLLGRMRPGETVVHYAGAGWTAAGDFRQVEDWWAYLDRFVQRLREPLRVAILTPSTGALRTAPDTYTYAAVVDPAYVGPEGARVDGVRRYRTIGRALADVPADNDAPYVIFVRRGRYHEKLSIDRPFVYLIGEDRETTVLSYDDVAGGPCTDSPLRRALLARWQAENRSAQPRQPDRCGTRGSFTLRIAAPAVRVAHLTVENAFDYPAYQDSLRDLQAVAVLVDREADRTVFYDCVIRGYQDTLFVEGNRSYFRNCTILGHVDFIFGGGTAVFEACDLISRDRGRPNNGYVVAPSTPRSRPYGLIFYRCRLLKESPAMAPASVWLGRPWHPSNQPGLVSSNAVFLHCYMDDHIRPEGWTEMHGVDPMGERLFEYGSSGPGAHPDRPRLTAAEAVLYAPVHVLAGWTPWRDLV
>NZ_AP019797.1|WP_161542424.1|3055605_3056787_-|glycoside-hydrolase-family-88-protein
MRWYGRILGIGLGCLLGLIAQAQPPDVRPWSVRMAESVMRQKPLLSERWHYEVGVMLRAFEELWLRTGESRYFEYIRANIDRFVTPEGTIRTYEKEEYNLDQINTGKLLFLLYEQTGEERYRRAIDTLRDQLRHHPRTSEGGFWHKKIYPYQLWLDGIYMMGPFLVRYGVTFGDAKAIDETAREILLVARYLRDPRTGLYYHGWDEKRQQIWADSITGRSANFWGRGMGWYAMALVDVLDWLPADHPDRPAIIRILEDLAEAVARVQDPVTGLWYQVLDQPAYPGNYLEASASSMFVYALAKGVRKGYLPAKYLEVARRGYRGLVKQLVSVDPDGTVHLHQICAVAGLGGPRQRDGSIAYYLSEPIVSDDPKGVGPFILASLEIEAFEGGALH
>NZ_AP019797.1|WP_161542066.1|3056889_3058626_-|T9SS-type-A-sorting-domain-containing-protein
MRTATSAWIGLLVLLLFGAANSRAQELIVEPFNVSGQYLNEVIAGDTTATGERNDPNRVYVLRRNGVYLVNDDIIVRGFDLRLMTEEGEGEKAIIYPVVNTQTGTFAADPIIRMEGNVWIKDVVLVGYVDADPNEVVNIGSTIIRTTSPGYDLILDGVVMSNTRGQHIRTEAAARVIRITNTIFANMGDLGRSNFGAGKAIDLRDTSVDTLFIQNCTFVNFQDRIIRHRSSTAPINNLIFDHNTILNGMSYHGTLALGWVGKSVRITNNLFLDSFVLGADTSDASRQAEFDEHGELYPNGKPRMIWIFSVPNDTTQWVVSNNYWAVSDSVEAFYEKYGDGAGDDGNPDNGTDGDNDIIGPGAPLSYHINSRLGADSVNAFIELEDLQVANRPYISKMLRMAEWYRTQTGRTKSTTSFVRALHDFDRKPVTYFMREFDASYPTDSPAYTGAAKGFPAGDLNWFPDKKAEWELTTIERQPGNLPVTAFRLHQNYPNPFTRETRITYTLPEPATVTLRVFNLLGQEVARLADGVRQAAGVYTATWDGMDLLGRKAAPGVYFYRLEAGGTVLTRKMLLLPAN
>NZ_AP019797.1|WP_161542067.1|3058663_3061678_-|TonB-dependent-receptor
MKNWWLALSLTLGALTAVPAALAQGTVYGVVTDSLTGEALPGANVYLVGTGKGSATDLEGRYRITGIAPGTYTLRVSYLSYQTRELPLRIQDGETIVLNIALVPESIGGEEIVIVGQVEGQVAAINQQLNANTIVNVVSEEKIQELPDANAAEALGRLPGVAVQRSGGEANKIVLRGLSDRFTTITVDGVRLAATDADARGLDLSTISQSSLAGIELYKALTPDKDADAIAGSVNLVTRKAPEQRLVRFDVRGAYNQLNQTWGQYDLSARYGERFWRKRLGVQLIGSLERRDRSREYYDLSYDMGLAGGTDYEISDIELNFRNEIRTRQGVSLLLDLDTPDGGTIRFNNVFNATQRSFIDYYRNYPTEGSEMFYGARDREQNIYTFTSALRGEQYLRGWQLNWGASYARSQSHDPFDFDISFTEPSATDPQGNPIAGMGRIPPEELKGPPESIISHALNNFERAYFYTAFYREEENREGETTLYLDLARDYALGGGVAGQFKLGGKFRSKTRFRERSELLAPYYNEAFPRYVQTADGQVVPKDFTGTPFEQLQMVGDRLLVTNFLGANPEDRDLFDRFRLYPMIDRDLLRTWWDLNRDGFSDQAGTNPEFERNLEADAYFYDLTERVSAAYVMNTLHFGPRVSLIAGVRVERENNDYLTRYTPDDLSGFPVPKGTYRDTSSTFSETIWLPNVHLTLRPTDFLTVRLAAYKALARPDYNQRLPSFVARKAGTFYPGNSLFVGNPDLKAAQAWNYEVNVALYDGRFGLFSVSAFYKDIKNMYHQINGAFFDAASADSLFDRLGINVTSPFQNEGFALTYPYNSSKPTRVWGVEIEHQANFLFLPGVLRNLVLTYNLSFIRSETYIPGTQTEEYCEEILPGICVPKLRYRFVERKHKLERQPDFLSNVAIGYDYRGFSARLSMFHQGEFNTRFSPNGRDDRVVKSFTRWDLALRQQIRPNLYVLLNVNNLTNVEEGTLVLNRVQGWRLPNDREIYGTTVDFGLRLVL
>NZ_AP019797.1|WP_012844960.1|3062164_3062524_+|hypothetical-protein
MKLRLTERDVRLRLEAEDLETLRRTGRVELVTPFDAQTAFTCTLRIDAQTAVPVAHLDGAHLTVRLPIEEARRWLDSDQIGIEARQAAGPNRTLKLLIEKDIGCQHKPQARPSDVAAER
>NZ_AP019797.1|WP_161542068.1|3062504_3063137_+|NTP-transferase-domain-containing-protein
MSPPNADLTALLLAGGRSRRFGTDKARAVVGGVPMLRRIYETACALTPHVLLSVRADGDFYLDLVPLEVPRLLDPVPDAGPLAGLVAGLRAAQTPWLLALACDLPFLTDDTLRQLLAARSPETAAVVPVTPDGHRQPLCALYHVDVLRPVAEAWLAAGRHALQALLDRLSVTTLPVPDAPLRNVNTPDDLLAERVGPERHISGGRSPARD
>NZ_AP019797.1|WP_161542069.1|3063071_3063998_-|GTPase
MDVAVLTEWETLRERLLQGPPWRTLMVAGPVNAGKTTLARWLAAQVSEHYRTLFLDADPGQSLIGPPTTLALSRVPIDPDCWLRLRFVGHISPEGHLLQMLSGLVRLVEAARWHRAQRLVIDLPGHMANDAGRELFFQMLDVIRPDYVVALQREDELEPVLRCFRRSRRPRIVRLPVAEAVQERDRWVRSDYRRERFQRYFAGARLRRLSVQARGLHGMVPPLDNPEAVRHRLVALCDRHGFARVLGIVARYDAELAWLHFWAPPFRAREIATIQFGRFRLDPAEVGLITRRRPPTGDVPLRTDALGE

Crispr_ID: NZ_AP019797_15

• CRISPR_ID: NZ_AP019797_15
• CRISPR_location: 3368573-3368719
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas3,WYL

Consensus repeat of NZ_AP019797_15

Consensus_repeat	Method
ATGTTTCACGTGAAACGCTGC	PILER-CR

spacers of NZ_AP019797_15

>15.1|3368594|28|NZ_AP019797|PILER-CR
AACACGGCCGCACCTCCGCTCCGACCGG
>15.2|3368643|20|NZ_AP019797|PILER-CR
GGAGAAGCCGAGCGCCCGAC
>15.3|3368684|20|NZ_AP019797|PILER-CR
AGTAGCGTCGCCTGCGCCGA

CRISPR arrays and Neighbor proteins around NZ_AP019797_15

CRISPR arrays

The CRISPR arrays of NZ_AP019797_15

>merge|NZ_AP019797|15|3368573-3368719|PILER-CR
ATGTTTCACGTGAAACACTGCAACACGGCCGCACCTCCGCTCCGACCGGATGTTTCACGTGAAACGCTGCGGAGAAGCCGAGCGCCCGACATGTTTCACGTGAAACAGTAGCGTCGCCTGCGCCGAGCGTTTCACGTGAAACGCTGC

>NZ_AP019797|15|14|3368573-3368719|PILER-CR
ATGTTTCACGTGAAACACTGC	AACACGGCCGCACCTCCGCTCCGACCGG
ATGTTTCACGTGAAACGCTGC	GGAGAAGCCGAGCGCCCGAC
ATGTTTCACGTGAAACAGTAG	CGTCGCCTGCGCCGAGCGTT
TCACGTGAAACGCTGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP019797.1|WP_161542301.1|3372109_3373120_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl|CDD|225253
NZ_AP019797.1|WP_161542304.1|3375941_3378515_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|274362
NZ_AP019797.1|WP_161542298.1|3364986_3367662_+|CHAT-domain-containing-protein	unknown	unknown	gnl|CDD|378942
NZ_AP019797.1|WP_161542292.1|3358144_3359710_+|HTTM-domain-containing-protein	unknown	unknown	gnl|CDD|214802
NZ_AP019797.1|WP_161542307.1|3382257_3384081_-|membrane-protein-insertase-YidC	unknown	unknown	gnl|CDD|234942
NZ_AP019797.1|WP_161542294.1|3360593_3361427_-|glycosyltransferase	unknown	unknown	gnl|CDD|132997
NZ_AP019797.1|WP_161542303.1|3373880_3375782_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl|CDD|235362
NZ_AP019797.1|WP_161542291.1|3357659_3358148_+|hypothetical-protein	unknown	unknown	gnl|CDD|182258
NZ_AP019797.1|WP_161542299.1|3367639_3368572_+|N-acetylmuramic-acid-6-phosphate-etherase	unknown	unknown	gnl|CDD|235467
NZ_AP019797.1|WP_012845243.1|3384631_3384790_-|50S-ribosomal-protein-L34	unknown	unknown	gnl|CDD|366117
NZ_AP019797.1|WP_161542305.1|3378516_3380874_+|PAS-domain-S-box-protein	unknown	unknown	gnl|CDD|223715
NZ_AP019797.1|WP_161542290.1|3356559_3357663_+|glycosyltransferase	unknown	unknown	gnl|CDD|340829
NZ_AP019797.1|WP_161542297.1|3363518_3364682_-|DNA-replication-and-repair-protein-RecF	unknown	unknown	gnl|CDD|234608
NZ_AP019797.1|WP_161542300.1|3368798_3372137_+|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl|CDD|224118
NZ_AP019797.1|WP_161542295.1|3361575_3361998_+|MaoC-family-dehydratase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|239533
NZ_AP019797.1|WP_161542302.1|3373160_3373880_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl|CDD|234637
NZ_AP019797.1|WP_161542306.1|3380850_3382239_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl|CDD|235392
NZ_AP019797.1|WP_155816007.1|3384156_3384561_-|ribonuclease-P-protein-component	unknown	unknown	gnl|CDD|234989
NZ_AP019797.1|WP_161542293.1|3359706_3360612_+|hypothetical-protein	unknown	unknown	gnl|CDD|214802
NZ_AP019797.1|WP_161542296.1|3362005_3363487_-|M48-family-metalloprotease	unknown	unknown	gnl|CDD|320692

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_AP019797.1|WP_161542301.1|3372109_3373120_-|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	3.1e-69	228.6	7.8
NZ_AP019797.1|WP_161542300.1|3368798_3372137_+|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	1.3e-12	42.1	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_AP019797.1|WP_161542301.1|3372109_3373120_-|WYL-domain-containing-protein	gnl|CDD|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	8.34593e-60
NZ_AP019797.1|WP_161542304.1|3375941_3378515_+|PAS-domain-S-box-protein	gnl|CDD|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	6.77457e-64
NZ_AP019797.1|WP_161542298.1|3364986_3367662_+|CHAT-domain-containing-protein	gnl|CDD|378942	pfam12770, CHAT, CHAT domain. These proteins appear to be related to peptidases in peptidase clan CD that includes the caspases. This domain has been termed the CHAT domain for Caspase HetF Associated with Tprs. This family has been identified as a sister group to the separins.	3.89834e-48
NZ_AP019797.1|WP_161542292.1|3358144_3359710_+|HTTM-domain-containing-protein	gnl|CDD|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	1.75434e-10
NZ_AP019797.1|WP_161542307.1|3382257_3384081_-|membrane-protein-insertase-YidC	gnl|CDD|234942	PRK01318, PRK01318, membrane protein insertase; Provisional.	1.20811e-121
NZ_AP019797.1|WP_161542294.1|3360593_3361427_-|glycosyltransferase	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	2.26561e-15
NZ_AP019797.1|WP_161542303.1|3373880_3375782_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl|CDD|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_AP019797.1|WP_161542291.1|3357659_3358148_+|hypothetical-protein	gnl|CDD|182258	PRK10130, PRK10130, HTH-type transcriptional regulator EutR.	0.00758987
NZ_AP019797.1|WP_161542299.1|3367639_3368572_+|N-acetylmuramic-acid-6-phosphate-etherase	gnl|CDD|235467	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed.	0
NZ_AP019797.1|WP_012845243.1|3384631_3384790_-|50S-ribosomal-protein-L34	gnl|CDD|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	1.18745e-10
NZ_AP019797.1|WP_161542305.1|3378516_3380874_+|PAS-domain-S-box-protein	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.56465e-65
NZ_AP019797.1|WP_161542290.1|3356559_3357663_+|glycosyltransferase	gnl|CDD|340829	cd03799, GT4_AmsK-like, Erwinia amylovora AmsK and similar proteins. This is a family of GT4 glycosyltransferases found specifically in certain bacteria. AmsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.	3.10038e-67
NZ_AP019797.1|WP_161542297.1|3363518_3364682_-|DNA-replication-and-repair-protein-RecF	gnl|CDD|234608	PRK00064, recF, recombination protein F; Reviewed.	4.23322e-99
NZ_AP019797.1|WP_161542300.1|3368798_3372137_+|transcription-repair-coupling-factor	gnl|CDD|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_AP019797.1|WP_161542295.1|3361575_3361998_+|MaoC-family-dehydratase-N-terminal-domain-containing-protein	gnl|CDD|239533	cd03449, R_hydratase, (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.	2.01056e-52
NZ_AP019797.1|WP_161542302.1|3373160_3373880_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl|CDD|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	1.3269e-47
NZ_AP019797.1|WP_161542306.1|3380850_3382239_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl|CDD|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_AP019797.1|WP_155816007.1|3384156_3384561_-|ribonuclease-P-protein-component	gnl|CDD|234989	PRK01903, rnpA, ribonuclease P protein component.	3.12214e-11
NZ_AP019797.1|WP_161542293.1|3359706_3360612_+|hypothetical-protein	gnl|CDD|214802	smart00752, HTTM, Horizontally Transferred TransMembrane Domain. Sequence analysis of vitamin K dependent gamma-carboxylases (VKGC) revealed the presence of a novel domain, HTTM (Horizontally Transferred TransMembrane) in its N-terminus. In contrast to most known domains, HTTM contains four transmembrane regions. Its occurrence in eukaryotes, bacteria and archaea is more likely caused by horizontal gene transfer than by early invention. The conservation of VKGC catalytic sites indicates an enzymatic function also for the other family members.	0.000536684
NZ_AP019797.1|WP_161542296.1|3362005_3363487_-|M48-family-metalloprotease	gnl|CDD|320692	cd07333, M48C_bepA_like, Peptidase M48C Ste24p bepA-like, integral membrane protein. This family contains peptidase M48C Ste24p protease bepA (formerly yfgC)-like proteins considered to be putative metallopeptidases, containing a zinc-binding motif, HEXXH, and a COOH-terminal ER retrieval signal (KKXX). They proteolytically remove the C-terminal three residues of farnesylated proteins. They are integral membrane proteins associated with the endoplasmic reticulum and golgi, binding one zinc ion per subunit. In eukaryotes, Ste24p is required for the first NH2-terminal proteolytic processing event within the a-factor precursor, which takes place after COOH-terminal CAAX modification (C is cysteine; A is usually aliphatic; X is one of several amino acids) is complete. Mutation studies have shown that the HEXXH protease motif, which is extracellular but adjacent to a transmembrane domain and therefore close to the membrane surface, is critical for Ste24p activity. Several members of this family also contain tetratricopeptide (TPR) repeat motifs, which are involved in a variety of functions including protein-protein interactions. BepA has been shown to possess protease activity and is responsible for the degradation of incorrectly folded LptD, an essential outer-membrane protein (OMP) involved in OM transport and assembly of lipopolysaccharide. Overexpression of the bepA protease causes abnormal biofilm architecture.	7.47068e-65

Protein sequences

>NZ_AP019797.1|WP_161542299.1|3367639_3368572_+|N-acetylmuramic-acid-6-phosphate-etherase
MERPSLFEELKALATEQRNPHSMHIDTAPVREILEIINTEDHLVPIAVRREIPYIEQAVHLIVDAFKQGGRLFYVGAGTSGRLGILDAAECPPTFGTPPEMVQGLIAGGPEAVFRAQEGAEDREEDGARDLQRAGVTPRDVVCGLAASRRTPYVVGAIRYARQLGCRTIFITCTPREEFPLEVDVAICPVVGPEVIMGSTRMKSGTAQKLVLNMLSTAAMIRLGKVYENMMVDLQMTNQKLRERARRTVMIVTGLDYEAASRLLEAAGGHVKTAIVMALAGVSAEEARRRLARADGFVRAAIANEGPPPA
>NZ_AP019797.1|WP_161542298.1|3364986_3367662_+|CHAT-domain-containing-protein
MWLLVLWLYLQPLLSSGNPCDSLRQVVAQLPRDAREASAELYPLAVQSLRRYRQCPGLTRQQLMQLYRREASYLHALHRYADVLALVDTFLTRFARQPDSLMFYQMYRWRGYEYYLLGDLPAAVVAYNQALRYLPAREIRARVSRLSDLGAIYSRIQDYETAYQYYLQAYYLWNQIPPDDSLRLWARLDVLHGLASLLVVHPTAGGRSREAGLAEAGRLLVEARQLLPRANIARRLRLQMQLELGLTEAMQRYLSGRPEQALQVLEELLQRARQLNEPHWRVEILYRQGLAFWYAGRLQEAERSFLEAQAHANEALNDDTRRLILTRLAQLYEEQGRPAKAEKFFRQAIPYVETYLIRLQTTQWATLPTASWYDPYRGLVRVLLRQQHYAEALQWLERGRARNLQAFRRYHAWTRQMPLAQQQRRDSLVHALNQIRARLSNPNLPADEALRLKSQEATLELQLRNLLALPPEQPEAPPATLQQRLARLGAAALVYFIDSVSGLFLLTADTLRFFPLTLTPDSLEQLLRQVSPVFDSEGSGSVRGARHFNLRALHRLFELLVAPALPFLPPDSPLFIVPDGPLFRLPFAALVLDFQRPYAYDHATYLTERYPISILPALGLLLDSLQATDALLDVSGLGRARFADDPRLREVLPVVFRRNPLPDLPGVHEELERITRRFVRAQRWEDYRATEPRFRQAATESRVLHLASHVLLHPTSSAFHAIVLSPSPGDDGVLFLHELLRNPLSADLVVLSGCNTADGAVLPGEGLEGLQYAILAAGARGVVATRWLVEDRSMAELMDRFYGYLAAGLPLDRALQQARLDFLKNAPLELQSPFYWAAPAFFGAPRVLPLTPKSYPLLPWGWILLLLLGVGLGVLLRYRKHRRAHGASLAV
>NZ_AP019797.1|WP_161542297.1|3363518_3364682_-|DNA-replication-and-repair-protein-RecF
MLLRSLRVRNFRAHEDTRVAFAPRINLIGGPNGAGKTNLLEAIHYLCLSKSFLAAQDTYALREGAPFFELEGVFVGTHRPELVVRLVYVPGEGKRVFFNGAPLERLADLVGELPVVVLSPADQALTGGPPEERRRFLDNLLSQAYPAYLQDLLQYRRALRQRNELLARWRRHPASVQPSLLESWQEELVTLGGRLIHRRLRFVQEFAAYLAEAHACLGLTAEVPRIEYVTVAPLDPEADPETIAAAFRARLHRLATREREQGRTLAGPHRDELILRLNGLEVRRYASQGQHRIMGLALKLAKFFYLRARRDETPLLLLDDVFDGLDRYRTQRILELLQHGEQIEQSFVTSARLDLLQELQTLAAPENRLFWVEAGRVREPDPSLSLS
>NZ_AP019797.1|WP_161542296.1|3362005_3363487_-|M48-family-metalloprotease
MRVRTYLLVFLILIFFVEGCAVSTNPVSGRRRLYGYSWAEERRIGQEADRQIVAQYGLYDDPELAAYVDSLGQVILAHSHLRRPNTPKEFRETPFVFRVLDSPVVNAFALPGGYVYVTRGLLAHLNNEAQLAVVLGHEIGHVAARHASQRAFELQLGQVALLGGAVLGQEVLGLPGGDVLQLGGAVAQLLFLKYSRDDERESDRLGVEYAVRAGYDAAEAAAFFRSLKRLSEQSGASLPSFLSTHPDPGEREQTIRELAARWAQEVGPATRVNQAAYYARIEGIVLGEDPRQGYVADGAFYHPTLRFWFPVPAAFQVINQPSQVLLVEAEQQAVVVLTLASESSAEEAARAWAAREGLTVLDRGSERVNGLPAVYVVAEGQTSEGQTVRVLRYFIEHEGRVYSLAGYTLAAQYARYRPVFLQVMRGFAPLRDPARLNVQPVVLAIRPAERTAPFRALLPALPEAFTPEAVAIMNQVELDAVVQAGTPLKLPQR
>NZ_AP019797.1|WP_161542295.1|3361575_3361998_+|MaoC-family-dehydratase-N-terminal-domain-containing-protein
MYTYETLQVGDRFTATRRITAEDVRKFAELTGDDNPIHLDPEYAKRTRFGRPIVHGVLLLGIISKVLGRDFPGHGSIAVALSCRFLRPVPVDSEITVEVKIAEKIEKHRHIRAKVYIYLDGKIAVGGEATLIPPSPETAP
>NZ_AP019797.1|WP_161542294.1|3360593_3361427_-|glycosyltransferase
MAQELQEKQRWPKVSCLMVTADRPHLVRRAIRSYLQQTYPNRELVVLDNGRQPLDEALLAEVPADELVYARVEPRPDLVIGTLRNQALELARGDYVAPQWDDDDWSHPERLMRQMQVLLSGDYDACTLAGTLMHVNHPAYFFHPFIGLLRHGVPPTIVHRRNATIRYPDLRRTSDTHYVEAWRRTGRYVILPPSESYLYLRYFHGGNLWEQEHFLRRMRNTPRDFLAYLWYRYVRGNEFDHPRFRLTPAMQAAFERYLQDSIETGVFDLERLQALHH
>NZ_AP019797.1|WP_161542293.1|3359706_3360612_+|hypothetical-protein
MRSPLRDLFDFERPETLGERLFFWLFELFVVLALSGHAWNWAVYLGRLEAPLYPTGLARYLDVSLLMAPGVALAVAAVVTVLLLLGLTHRWPLAYLLALLGLHLLYVSRFSLGKTPHGVHLLGLTLLSLALGSLLFRTPLHRRRAAMGFTFFFVGLSYTLAALSKLVATGPGWADGMHLTLWILEKGTDMMARTGAWTPNPVQQLLLAHPELSTVLLAGALLLELLAFTVWWRPFRLPVLLALVGMHAGIYAAMQISFHFAAIELLLLALPWSRWLDRLLQVQWAARIGRPLLRLAQWCNA
>NZ_AP019797.1|WP_161542292.1|3358144_3359710_+|HTTM-domain-containing-protein
MNADRLDRWLFDSFRPTARGLAAYRIAYALFVLLLIDPGHSPYFNFHPLAELPDSFFLPLPGPMQLFSGFPPRWFFAGLHLLLDLSLVALLFGYRTRLASWMTGLLFLIGFGFLFSAGKINHVILFVLLPWVMSFSNWGAAWSLDARLGRARPTVEGWPLALLALLTGFAMFTAGFTKLLGGWLDPATQATRGHWLKQYFVVGRQDLLADLATAPLPAGLWELMDWGTVLLEIGFLPAAFVPGLFRVFLSLMVLFHLGTALFFNITFVQNLIVYAAFLNWDRIAARAPRLRLSPRLALLLIPLLGLAFYLFGSPLRRLDVLVTFSSDLSLTELLANIAAALVVLGLALSRARDLLRRPLPLTPAAAGAYRRARWTLAIVLVLYAALVGTHAGEFWPMSVFPMFSRAGQPWTRAVVRELEATEPVHWDTLQAPASLPGRPFPLNQTALDPVDLINFVTRPEPWDARRRQTLQRLFGPELEGRRLLVLQVQGMPSGEGVQLRYLPILVLTADTVQVHPALQQP
>NZ_AP019797.1|WP_161542291.1|3357659_3358148_+|hypothetical-protein
MNRTRIRRLFRALAVLLPLQYALVGLVQLGGGREPWPLLVMPGFKATWHEGMPLLSQRVTFVVHRPDGSIRHLPADTVLAVLPYSHHRAMLEAFFRPASLSGTPETERIRRPDARRWLWDRLQTLTRSTPVQVDIVWEALRIDPKTGTLQAQPLDTLTLQRP
>NZ_AP019797.1|WP_161542290.1|3356559_3357663_+|glycosyltransferase
MQPVVLHFKSVYLNLSETFIDRLVRHHERYRPVVGTLHPRHYLDGLPVYAPRGPAAWRDRLLQQLNRTPRFLFAVCRREQPAVLHAHFGLDGYRLLGLTRRTRRPLVVSFYGHDVSRLPDEPGWRRRYRHLARGGTRFIAATDFMKRQLIALGFPEEKIDVVRFGLDLSAFPFQPRTRAGLRLLMIGRLVEKKGHRTALEAVARLRAAGYAVELHCYGDGPLRGALQAEAHRLGIAACVAFHGAVTNEVACQTYYTHDVLLVPSQTAADGDQEGLPNVIIEGLAAGIPVVATRHAGIPELVVHEKTGLLVPERDAKALAATVTRLIETPALVERLSRTGRAAVEQLYSLTRMVRDTEAVYDAARRSR
>NZ_AP019797.1|WP_161542300.1|3368798_3372137_+|transcription-repair-coupling-factor
MKLTDLQHRLESAAFFEPLHAHLESLSASTRLHLRGLAGSLPAFVLYDLSRHFRRPVLCLTPDEEQAAYLFSDLEQLLGVSDRLLRFPATGQKPYDPEQIPDSAPLIERTDVLRRLAEGFDGLLVASAEAIAERVPPPDRVRQETLVLTPGMVIDPAQLLAHLIARGFERVEFVEAPGEVALRGGILDVYPFTGTHPIRVEFFGDEIDTIREFDPRTQRSISRLTSARIVPNLSAADSEETARSIFEHLPDGALLVLFEEGALFDAVQARFAEAEQAYARLSTPDEHPRPETRYLPPAELATHLHRYPALLFGTLAEAELTLSWDTHPQPAFHGNLNLLRERLHENARRGWETVILCDSRSQEARLHDLLQEEIEAGGVRLLVESLHEGFEVPEARLAVYTDHQIFGRYHRPTTRRRRRLLGGLSLRALQNLQPGDYVVHVDFGIGQFAGLQRITIRGKQQEVVRLHYADGDVLYVSVNALHKLHRYTGKEGHRPRLTKLGSGQWEKVKARTKKRVKDIARDLIRLYAKRKASRGFAFSPDTVWQREMEAAFEYEDTPDQAAAAEAVKRDMEQPVPMDRLVCGDVGFGKTEIAIRAAFKAVQDGKQVAVLVPTTILADQHYETFTRRLAPYPVRIEVLSRFRSPAQQRAVLRDLAAGKVDIIIGTHRLLSKDVQFKDLGLLIIDEEQRFGVAAKERLRQLRVEVDTLTLTATPIPRTLQFALMGARDLSIISTPPPNRQPIVTEIHTFDETLIRDAIRYEISRGGQVFFIHNRVQSIYEMAARLQAIVPDVRIAVAHGQMKPRELERVMHDFMARKYDVLVSTNIIESGLDIPNANTIIINHAEQFGLADLHQLRGRVGRSDRKAFCYLLVPSIHGLTREARQRLQAIEEFSELGSGFSIAMRDLDIRGAGNLLGAEQSGFIEEIGFETYQQILDEAIRELREEEFADVLGAPPPKPPETSVDVEADAFIPDTYVSSNVERLNLYRRLSEATDEAAIEAFREELADRFGPVPPEVDNLLWAARLKLLGQALRLPKVLFKNRRLFLEFPLQDEDPHFYAHHFMPLLERLSQLDRRYVLKDQNRKLRAIVQDVPDLETAYQVLRQLQPAEVPVS
>NZ_AP019797.1|WP_161542301.1|3372109_3373120_-|WYL-domain-containing-protein
MKLAERTRNRTERLFALTLLLQTRPGLTARQLAEHFGVSRRTIFRDLRALSEANVPLTYAEGGGYEILEGYQLPPLMFTAREAATLLIGTAFMKRQPDASLRADADAVALKIRSVLPRSIREYIDRLQERIVIDPYWLQTMQGSDEEAGYWYELSEAIARQQSVHLEYYVPSRDELTQRKVDPLGLVYYTDHWNLIAYDHLRKDIRNFRLDRIQRLTVLRERFTPPRDFDLNAYLEAQGAPAEAHRIRLRFARPTYRWARRSIPARIESEQETAEGVEVTFSFENLEYLARWLLRYGTEVEVLEPEALRAQLRAQARAILARYEPEAAQETGTSAG
>NZ_AP019797.1|WP_161542302.1|3373160_3373880_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MFHVKHPARLPMRVSRETPPAGWDPWAQLDPAQREQLEHYARLLQELGRRHNLVSRETLPELHRRHLLHCLALTWQPFPPESVVVDWGTGGGLPAVPLAIAFPEVTVHAVDAAQKKVLAVRTMVRRLGLTNLHVHHARAEHWEGAAHYSVSRATAPLATLWQWHRRVARPLAAPPDAWPPGLLALKGGDLSDELAALERLDPHLHVRIWPLDRLLGDPLFAEKYLVHVAAEPEPNASVR
>NZ_AP019797.1|WP_161542303.1|3373880_3375782_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MEIFSDERYDVIVVGGGHAGAEAAAAAARMGARTLLITMSLETIGRMSCNPAIGGIGKGHLVREIDALGGIMGRMADQTGIQFRMLNRSKGPAVWGPRAQCDRKRYAEAVRRELESIPNLWMRADTVTEVLVEDRRVKGVRTQLGKTFYAPCVILTNGTFLNGVIHVGERQLGGGRMGERAATGLTACLERLGFESGRLKTGTPPRIDGRTIDYSRLQEQPGDPEPLPFSYMTDRLPDRQLSCWLTYTTPEVHAILRTGFDRSPMFTGRIKGRGPRYCPSIEDKIERFAERERHPIFLEPEGWDTYEVYVNGFSTSLPEEVQVAALRKIPGLERVHVLRPGYAIEYDYFPPYQIRYSLETKYVEGLFFAGQINGTTGYEEAAAQGLMAGINAVQKLRGAEPVVLRRSEAYIGVLIDDLVAKGTDEPYRMFTSRAEHRILLRQDNADLRLTELGYRLGLATRERYERLLKKKEAIARTRRALEETTVRPEQVNGYLERVGTSPIDRPERLVRLALRPQVNLRDLLEATGLREQVVVPAPGMEPVEMLVEIELKYEGYMDRERELVEKMRELEDWRIPPDFDYEAVETISKEAREKLSKIRPENLGQASRISGVRPADISVLMVLLRRYRRPQAA
>NZ_AP019797.1|WP_161542304.1|3375941_3378515_+|PAS-domain-S-box-protein
MEAVSITCWTPTAEAPLPAELAERLPPEARRWIEAVRENPPQAPLAHPFDTATGPLLLLALPYPSEPPLLIAALDLRTIFPETDTFFRTLVQSLRAVLWEADAHTFRFTYVSPQAEELLGYPVHRWLEEPDFWAAHIHPEDRDRAVAYCRETTDRGKDHDFTYRMIRADGQVIWVRDIVTVVPDEQGRPHRLRGLLLDVTEEQETRRELEVFRQRYQDLISNNPIATGVYCRGQVVYANPSMARLFGAERPEDLLGKTAADLIHPSNLEAALENVRKVVERRESVSYGRGRIQRLDGRSAIVDFRGVPITWEGEPAVLFFMWDVSEQLHTARRLAEREAQYQALFENAPAPMYVRRDRQFLLVNPAFVRLTGYSAEELTAPGFDAMRLVAPQSLPVVQERLARRRQGLPVAPRYELWIRRKDGKEILVEAISINIRWEGEPAVLGFFRDLSAQREAEAYLKQARKQAEEASQLKSRFLELMTHEIRTPLSTILGYADLLREELADKIPPELLEFVDVIRDSGRRLLGMLSDVLDLSLLETQRRRLEAEAVDLNDLARRLAADFAPMAREKGLRWETVCPEQPVRVVADSEMLYRALANIVHNAVKFTENGTVRLRVGRSDREGWIQVIDTGPGMDPAFARTGLFEPFRQESEGTARRHEGAGLGMAVARRFVEAMHGRIEVDTAPGRGTTVTVYLPLLTAQSASTSSALHPEARELRRLQQRLQERHPRILIVEDNPENARFLELALQDVAEVTVATDAHRALELIDAGLLQGQTFDLILLDLNLPGDFNGQALLHEIRRRSAYHHVPIVAQTAYAEPFRPEDFLAEGFDGFLIKPIDRLTLYRELDRLLTRQPTPS
>NZ_AP019797.1|WP_161542305.1|3378516_3380874_+|PAS-domain-S-box-protein
MPAPTEPLPDIYRILFEQANDAIFLADVETGCLLDANPRACELIGRTRDEIRGMHHLELHPREERERYRAIFQRHAEAGQAIEDVEVVHSDGTRIPVEISASRVVLNGRPALIGIFRDLRPRRELEQKLNEAESHYRILAEQNLIGVYLVQDGRFVYVNQYIADFLGYERPEDLIGRSLVELVHPEDLPTVTANIQKRLSGEIRTVHYSLRGFHRQGYLVEVEVIGSATTYRGRPAVLGVMLHTSEARRQARFYETESRILQDLLRGAPQEALLDALCTAIETRLPDGICTILLLSKDRLYRGASHMPPEYDALIEGLEIGPEVGSCGTAPFTKQPVWVSDVFSDPRWAAYRELAERFNFRACWSYPIQNARGEVLGTFAVYFPKERTPEPSEKEVLAHGASLATLILETHRLQTENARLAEVARQTSSGVLITDSERRVLWLNEGFTRLTGYTLADVYGRRPPEFLAGERTDRNTLEGIGERLREGLPVHTRIYFYRKDGTGFWDELRIEPLRDEQGRLIGFMGLNHDITALVEYEQELERARAEAETAARLKAAFLANMSHEIRTPLNSILGFAELLDEQLAANGLEPLREFTGIIQRSGRRLLRLINDILELSRLEADRLVLQTEPCALHTIVEEAVAELQPQAAQKGLALVVRAEQVSPVLGDPRRLHQIVTNLVANAIKYTEQGEVRIELHETTKDEARQVVLRVTDTGPGIDPDFLPHLFEPFQRAPSENDRSEGSGLGLAITKRLVEQMSGRITVESAPGKGTTFTVTFPALLADAEA
>NZ_AP019797.1|WP_161542306.1|3380850_3382239_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MRQRGDTIAAIATARGRAALAIVRLSGPEACRIAAACFRGADLQAVPSHTAHFGYVLSPDGEPIDQVVATVFRAPRSYTGEDVVELTCHGGDLAPQLILETLLHYGARLAEPGEFTLRAFLNGKLDLAQAEAVADLIHAGSTRAHRVSLAHLQGRYSEQLQRLRSDLLELCAYVELELDFSDEDVEFADRAQLEALLDRTERLLDELLRSYRLGELLRDGVRVVIGGRPNAGKSTLLNALLGQDRAIVSPVPGTTRDQIEAEAEIEGLRFRFVDTAGLRPTADEIEAEGVRRAQQAIAAADVLVYVFDLTAGLAPDERAYLVQLRTEQPALPVIVVGNKRDLLDSAPELPELDRPVLVLSARRAREDAAELQPLIRELVAAVTADLGSMDESAVVMNQRHRQHLARAREAVQAARAALDQGLSGDLLALELRRALHELGAITGEITTEDVLDQIFSRFCIGK
>NZ_AP019797.1|WP_161542307.1|3382257_3384081_-|membrane-protein-insertase-YidC
MDRNVVIATILTALIMFVWLWWLAPPPPPLTTAARDSLQQEDTAAQETPVPEETPASPGAPLLAGPLSDTLLAAARNGRARTITIETDLYEARLSTKGATLVSLKLKKYKQYDFETPVQLVDTTKPGALSLVFTTPTNHLVDTRALYFRTATTADTIRVADEPVEVAFEVPVGDGRIRQVYTFLPGDYEVRLRVEQEGAATFSTIEGYELVWNGGVPFAERDRDDEARHSGAFARSGGELEKITLDRHRTEEKRLAGQVDWVAVKNKFFTAVMIPSGETRGAELVGERLGEPEDPSYWEDYAARLLMPRPEDGQVDEFRLYLGPMEYFRLARYDLGLYDMVDYGWDAFEWMTRPLAKFVFIPLFTLLGRLLGNYGLAIIVFALLVKIALYPLTRASFRNMAKMRELQPELEAIREKYADNPQKQQEAMMKLYREKKINPLGGCLPMLLQWPVLIALWQYFQQSLIVRQQAFLWAKDLSAPDPILHLPFKIPLYGDFVAGFTLLMGLSMIIQMRIQSASTPSNPQTKILTYVFPVFIFAIFNRLSSALNLYYLCYNIFSAIQQFWINRSLEREKAKAAVDGQGDRRAAQKAARKAAEARRKKKARTRR
>NZ_AP019797.1|WP_155816007.1|3384156_3384561_-|ribonuclease-P-protein-component
MPRAFRLRRQRLIRPLFDRSRTDVGTIARGCVRLLYRVVPRSEVGADVPVQVGFSAGRQARRAVVRNRIRRLLRETYRLHQHPLVELFRNRPDTLTLMILYRADPAVARECIRRDLPEALRRLTEQLKNTLLEA
>NZ_AP019797.1|WP_012845243.1|3384631_3384790_-|50S-ribosomal-protein-L34
MPKRTYQPSRRKRLNTHGFRARMKTKDGRKILARRRKKGRKSLTVSDRMSGK

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_AP019797_7	7.1|1676890|35|NZ_AP019797|CRISPRCasFinder,CRT	1676890-1676924	35	NZ_AP019797.1	1675986-1676020	0	1.0

1. spacer 7.1|1676890|35|NZ_AP019797|CRISPRCasFinder,CRT matches to position: 1675986-1676020, mismatch: 0, identity: 1.0

acatgtacctgcgcggaatatcggttacggagatc	CRISPR spacer
acatgtacctgcgcggaatatcggttacggagatc	Protospacer
***********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_AP019797_3	3.36|553153|33|NZ_AP019797|PILER-CR,CRT	553153-553185	33	AX059140	Sequence 1 from Patent WO0075335	60866-60898	0	1.0
NZ_AP019797_3	3.36|553153|33|NZ_AP019797|PILER-CR,CRT	553153-553185	33	NC_004735	Rhodothermus phage RM378, complete genome	60866-60898	0	1.0
NZ_AP019797_3	3.73|553154|32|NZ_AP019797|CRISPRCasFinder	553154-553185	32	AX059140	Sequence 1 from Patent WO0075335	60867-60898	0	1.0
NZ_AP019797_3	3.73|553154|32|NZ_AP019797|CRISPRCasFinder	553154-553185	32	NC_004735	Rhodothermus phage RM378, complete genome	60867-60898	0	1.0
NZ_AP019797_6	6.4|1674578|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1674578-1674615	38	AX059140	Sequence 1 from Patent WO0075335	11370-11407	0	1.0
NZ_AP019797_6	6.4|1674578|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1674578-1674615	38	NC_004735	Rhodothermus phage RM378, complete genome	11370-11407	0	1.0
NZ_AP019797_14	14.1|3046488|35|NZ_AP019797|CRISPRCasFinder	3046488-3046522	35	AX059140	Sequence 1 from Patent WO0075335	119418-119452	1	0.971
NZ_AP019797_14	14.1|3046488|35|NZ_AP019797|CRISPRCasFinder	3046488-3046522	35	NC_004735	Rhodothermus phage RM378, complete genome	119418-119452	1	0.971
NZ_AP019797_15	15.3|3368684|20|NZ_AP019797|PILER-CR	3368684-3368703	20	MH834627	Arthrobacter phage Ryan, complete genome	6606-6625	1	0.95
NZ_AP019797_3	3.35|553092|33|NZ_AP019797|PILER-CR,CRT	553092-553124	33	AX059140	Sequence 1 from Patent WO0075335	57852-57884	2	0.939
NZ_AP019797_3	3.35|553092|33|NZ_AP019797|PILER-CR,CRT	553092-553124	33	NC_004735	Rhodothermus phage RM378, complete genome	57852-57884	2	0.939
NZ_AP019797_3	3.72|553093|32|NZ_AP019797|CRISPRCasFinder	553093-553124	32	AX059140	Sequence 1 from Patent WO0075335	57853-57884	2	0.938
NZ_AP019797_3	3.72|553093|32|NZ_AP019797|CRISPRCasFinder	553093-553124	32	NC_004735	Rhodothermus phage RM378, complete genome	57853-57884	2	0.938
NZ_AP019797_4	4.56|570655|32|NZ_AP019797|CRISPRCasFinder	570655-570686	32	AX059140	Sequence 1 from Patent WO0075335	84498-84529	2	0.938
NZ_AP019797_4	4.56|570655|32|NZ_AP019797|CRISPRCasFinder	570655-570686	32	NC_004735	Rhodothermus phage RM378, complete genome	84498-84529	2	0.938
NZ_AP019797_4	4.80|570654|33|NZ_AP019797|PILER-CR	570654-570686	33	AX059140	Sequence 1 from Patent WO0075335	84498-84530	2	0.939
NZ_AP019797_4	4.80|570654|33|NZ_AP019797|PILER-CR	570654-570686	33	NC_004735	Rhodothermus phage RM378, complete genome	84498-84530	2	0.939
NZ_AP019797_12	12.5|2073244|34|NZ_AP019797|CRISPRCasFinder,CRT	2073244-2073277	34	AX059140	Sequence 1 from Patent WO0075335	38440-38473	4	0.882
NZ_AP019797_12	12.5|2073244|34|NZ_AP019797|CRISPRCasFinder,CRT	2073244-2073277	34	NC_004735	Rhodothermus phage RM378, complete genome	38440-38473	4	0.882
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NZ_CP009112	Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence	356666-356693	5	0.821
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	MK524490	Mycobacterium phage Donny, complete genome	1618-1650	6	0.818
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	MH727561	Mycobacterium phage Serendipitous, complete genome	1618-1650	6	0.818
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	JN699007	Mycobacterium phage Acadian, complete genome	1618-1650	6	0.818
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	MT889381	Mycobacterium phage Suigeneris, complete genome	1618-1650	6	0.818
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	KY224000	Mycobacterium phage Rich, complete genome	1621-1653	6	0.818
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	KR080199	Mycobacterium phage Baee, complete genome	1624-1656	6	0.818
NZ_AP019797_3	3.41|551202|32|NZ_AP019797|CRISPRCasFinder	551202-551233	32	NZ_CP043850	Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence	70512-70543	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	MK524490	Mycobacterium phage Donny, complete genome	1618-1649	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	MH727561	Mycobacterium phage Serendipitous, complete genome	1618-1649	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	JN699007	Mycobacterium phage Acadian, complete genome	1618-1649	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	MT889381	Mycobacterium phage Suigeneris, complete genome	1618-1649	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	KY224000	Mycobacterium phage Rich, complete genome	1621-1652	6	0.812
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	KR080199	Mycobacterium phage Baee, complete genome	1624-1655	6	0.812
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NC_015057	Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence	237077-237108	6	0.812
NZ_AP019797_4	4.36|569435|32|NZ_AP019797|CRISPRCasFinder	569435-569466	32	NZ_CP019642	Planococcus sp. Y42 plasmid unnamed2, complete sequence	57511-57542	6	0.812
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3317195-3317226	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP050096	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence	148680-148711	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP050084	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence	207246-207277	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP050102	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence	129916-129947	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP050107	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence	167165-167196	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP050112	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence	167164-167195	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP048285	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence	27728-27759	6	0.812
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP053209	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence	19185-19216	6	0.812
NZ_AP019797_12	12.35|2075231|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2075231-2075267	37	NZ_CP015739	Shinella sp. HZN7 plasmid pShin-03, complete sequence	72644-72680	6	0.838
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NC_016588	Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence	194514-194541	6	0.786
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	147196-147223	6	0.786
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	585239-585266	6	0.786
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NZ_CP032324	Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence	642048-642075	6	0.786
NZ_AP019797_15	15.1|3368594|28|NZ_AP019797|PILER-CR	3368594-3368621	28	NZ_CP007797	Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence	145850-145877	6	0.786
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	163454-163486	7	0.788
NZ_AP019797_3	3.21|552238|33|NZ_AP019797|PILER-CR,CRT	552238-552270	33	NZ_CP007792	Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence	74712-74744	7	0.788
NZ_AP019797_3	3.29|552726|33|NZ_AP019797|PILER-CR,CRT	552726-552758	33	NZ_CP007792	Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence	74712-74744	7	0.788
NZ_AP019797_3	3.31|552848|33|NZ_AP019797|PILER-CR,CRT	552848-552880	33	MN617843	Mycobacterium phage Quesadilla, complete genome	68858-68890	7	0.788
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	12051-12082	7	0.781
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	12051-12082	7	0.781
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	163454-163485	7	0.781
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	KF024727	Mycobacterium phage Reprobate, complete genome	1612-1643	7	0.781
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NZ_CP007792	Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence	74712-74743	7	0.781
NZ_AP019797_3	3.60|552361|32|NZ_AP019797|CRISPRCasFinder	552361-552392	32	KY984068	Erwinia phage vB_EamM_Y3, complete genome	47570-47601	7	0.781
NZ_AP019797_3	3.61|552422|32|NZ_AP019797|CRISPRCasFinder	552422-552453	32	NZ_CP031947	Ruegeria sp. AD91A plasmid unnamed1, complete sequence	191542-191573	7	0.781
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NZ_CP007792	Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence	74712-74743	7	0.781
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	MN617843	Mycobacterium phage Quesadilla, complete genome	68858-68889	7	0.781
NZ_AP019797_3	3.69|552910|32|NZ_AP019797|CRISPRCasFinder	552910-552941	32	NC_015178	Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence	10978-11009	7	0.781
NZ_AP019797_3	3.69|552910|32|NZ_AP019797|CRISPRCasFinder	552910-552941	32	NC_009467	Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence	164289-164320	7	0.781
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP027794	Rhodococcus hoagii strain DSSKP-R-001 plasmid plas1, complete sequence	13559-13590	7	0.781
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP013072	Sphingobium indicum B90A plasmid pSRL2, complete sequence	72784-72815	7	0.781
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_AP022334	Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence	258953-258984	7	0.781
NZ_AP019797_4	4.27|570654|38|NZ_AP019797|CRT	570654-570691	38	AX059140	Sequence 1 from Patent WO0075335	84493-84530	7	0.816
NZ_AP019797_4	4.27|570654|38|NZ_AP019797|CRT	570654-570691	38	NC_004735	Rhodothermus phage RM378, complete genome	84493-84530	7	0.816
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	NZ_AP014705	Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence	302554-302585	7	0.781
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	MT310863	Streptomyces phage Issmi, complete genome	49319-49350	7	0.781
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	349398-349429	7	0.781
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP047175	Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence	90968-90999	7	0.781
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	471987-472018	7	0.781
NZ_AP019797_4	4.46|570045|32|NZ_AP019797|CRISPRCasFinder	570045-570076	32	MG592671	Vibrio phage 2.275.O._10N.286.54.E11, partial genome	124001-124032	7	0.781
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NC_019847	Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence	194688-194719	7	0.781
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1019577-1019608	7	0.781
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	1215909-1215940	7	0.781
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	959979-960010	7	0.781
NZ_AP019797_4	4.54|570533|32|NZ_AP019797|CRISPRCasFinder	570533-570564	32	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	11009-11040	7	0.781
NZ_AP019797_4	4.59|570838|32|NZ_AP019797|CRISPRCasFinder	570838-570869	32	MN694501	Marine virus AFVG_250M1038, complete genome	29071-29102	7	0.781
NZ_AP019797_4	4.59|570838|32|NZ_AP019797|CRISPRCasFinder	570838-570869	32	MN694756	Marine virus AFVG_250M15, complete genome	12946-12977	7	0.781
NZ_AP019797_4	4.59|570838|32|NZ_AP019797|CRISPRCasFinder	570838-570869	32	MN694135	Marine virus AFVG_250M1039, complete genome	29064-29095	7	0.781
NZ_AP019797_4	4.59|570838|32|NZ_AP019797|CRISPRCasFinder	570838-570869	32	MN694550	Marine virus AFVG_250M60, complete genome	12614-12645	7	0.781
NZ_AP019797_4	4.60|569434|33|NZ_AP019797|PILER-CR	569434-569466	33	NZ_CP019642	Planococcus sp. Y42 plasmid unnamed2, complete sequence	57510-57542	7	0.788
NZ_AP019797_4	4.70|570044|33|NZ_AP019797|PILER-CR	570044-570076	33	MG592671	Vibrio phage 2.275.O._10N.286.54.E11, partial genome	124001-124033	7	0.788
NZ_AP019797_4	4.83|570837|33|NZ_AP019797|PILER-CR	570837-570869	33	MN694501	Marine virus AFVG_250M1038, complete genome	29071-29103	7	0.788
NZ_AP019797_4	4.83|570837|33|NZ_AP019797|PILER-CR	570837-570869	33	MN694135	Marine virus AFVG_250M1039, complete genome	29064-29096	7	0.788
NZ_AP019797_4	4.83|570837|33|NZ_AP019797|PILER-CR	570837-570869	33	MN694756	Marine virus AFVG_250M15, complete genome	12945-12977	7	0.788
NZ_AP019797_4	4.83|570837|33|NZ_AP019797|PILER-CR	570837-570869	33	MN694550	Marine virus AFVG_250M60, complete genome	12613-12645	7	0.788
NZ_AP019797_12	12.63|2077104|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2077104-2077138	35	NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	568818-568852	7	0.8
NZ_AP019797_12	12.63|2077104|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2077104-2077138	35	NZ_CP030263	Ensifer adhaerens strain Corn53 plasmid AA, complete sequence	1648272-1648306	7	0.8
NZ_AP019797_3	3.9|551506|33|NZ_AP019797|PILER-CR,CRT	551506-551538	33	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	144044-144076	8	0.758
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	415517-415549	8	0.758
NZ_AP019797_3	3.23|552360|33|NZ_AP019797|PILER-CR,CRT	552360-552392	33	KY984068	Erwinia phage vB_EamM_Y3, complete genome	47569-47601	8	0.758
NZ_AP019797_3	3.24|552421|33|NZ_AP019797|PILER-CR,CRT	552421-552453	33	NZ_CP031947	Ruegeria sp. AD91A plasmid unnamed1, complete sequence	191542-191574	8	0.758
NZ_AP019797_3	3.37|553214|33|NZ_AP019797|PILER-CR,CRT	553214-553246	33	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	3220-3252	8	0.758
NZ_AP019797_3	3.46|551507|32|NZ_AP019797|CRISPRCasFinder	551507-551538	32	NZ_CP025613	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence	144045-144076	8	0.75
NZ_AP019797_3	3.46|551507|32|NZ_AP019797|CRISPRCasFinder	551507-551538	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	2048-2079	8	0.75
NZ_AP019797_3	3.47|551568|32|NZ_AP019797|CRISPRCasFinder	551568-551599	32	NZ_CP054622	Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence	129943-129974	8	0.75
NZ_AP019797_3	3.47|551568|32|NZ_AP019797|CRISPRCasFinder	551568-551599	32	NZ_CP039651	Azospirillum sp. TSA2s plasmid p1	110759-110790	8	0.75
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	415518-415549	8	0.75
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NC_012858	Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence	579523-579554	8	0.75
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP014526	Haematospirillum jordaniae strain H5569 plasmid unnamed 1, complete sequence	4653-4684	8	0.75
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	416724-416755	8	0.75
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	21421-21452	8	0.75
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP032348	Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence	151286-151317	8	0.75
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	71988-72019	8	0.75
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	MK937611	Gordonia phage Verity, complete genome	53073-53104	8	0.75
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_LR134470	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence	9307-9338	8	0.75
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP010990	Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence	117504-117535	8	0.75
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP012186	Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence	105846-105877	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_LT559121	Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence	44006-44037	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	CP054917	Streptomyces sp. NA02950 plasmid unnamed, complete sequence	143675-143706	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	MN369759	Mycobacterium phage Mithril, complete genome	54119-54150	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	MN428050	Mycobacterium phage Apex, complete genome	54313-54344	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	MN234171	Mycobacterium phage Magpie, complete genome	54022-54053	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	KX589269	Mycobacterium phage Fortunato, complete genome	54107-54138	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	MT639648	Mycobacterium phage Heath, complete genome	53778-53809	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NC_042034	Mycobacterium phage ChrisnMich, complete sequence	53078-53109	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NC_022331	Mycobacterium phage Bane1, complete genome	53875-53906	8	0.75
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	KF279413	Mycobacterium phage Bane2, complete genome	53853-53884	8	0.75
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	NZ_CP024582	Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence	330471-330502	8	0.75
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	NZ_CP025188	Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence	95304-95335	8	0.75
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	MF140418	Arthrobacter phage LiSara, complete genome	21898-21929	8	0.75
NZ_AP019797_4	4.36|569435|32|NZ_AP019797|CRISPRCasFinder	569435-569466	32	NZ_CP005961	Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence	191474-191505	8	0.75
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	657011-657042	8	0.75
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	341649-341680	8	0.75
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	490120-490151	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	106109-106140	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP013104	Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence	1452456-1452487	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	2179334-2179365	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP015369	Methylobacterium phyllosphaerae strain CBMB27 plasmid CBMB27-p2, complete sequence	25269-25300	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	299045-299076	8	0.75
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	156018-156049	8	0.75
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1423418-1423449	8	0.75
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1226136-1226167	8	0.75
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1235616-1235647	8	0.75
NZ_AP019797_4	4.58|570777|32|NZ_AP019797|CRISPRCasFinder	570777-570808	32	CP032840	Aeromonas veronii strain FC951 plasmid unnamed	116798-116829	8	0.75
NZ_AP019797_4	4.65|569739|33|NZ_AP019797|PILER-CR	569739-569771	33	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	657011-657043	8	0.758
NZ_AP019797_4	4.68|569922|33|NZ_AP019797|PILER-CR	569922-569954	33	NC_011758	Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence	349398-349430	8	0.758
NZ_AP019797_4	4.68|569922|33|NZ_AP019797|PILER-CR	569922-569954	33	NZ_CP047175	Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence	90968-91000	8	0.758
NZ_AP019797_4	4.68|569922|33|NZ_AP019797|PILER-CR	569922-569954	33	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	471987-472019	8	0.758
NZ_AP019797_4	4.77|570471|33|NZ_AP019797|PILER-CR	570471-570503	33	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1423418-1423450	8	0.758
NZ_AP019797_4	4.77|570471|33|NZ_AP019797|PILER-CR	570471-570503	33	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1226136-1226168	8	0.758
NZ_AP019797_4	4.77|570471|33|NZ_AP019797|PILER-CR	570471-570503	33	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1235616-1235648	8	0.758
NZ_AP019797_4	4.78|570532|33|NZ_AP019797|PILER-CR	570532-570564	33	MK416007	Klebsiella phage ST405-OXA48phi1.2, complete genome	11009-11041	8	0.758
NZ_AP019797_6	6.15|1675319|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675319-1675354	36	NZ_CP017105	Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence	744156-744191	8	0.778
NZ_AP019797_6	6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675385-1675421	37	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	496331-496367	8	0.784
NZ_AP019797_6	6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675385-1675421	37	NZ_CP029452	Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence	1572849-1572885	8	0.784
NZ_AP019797_6	6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675385-1675421	37	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	1551078-1551114	8	0.784
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1855944-1855979	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	735204-735239	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	786742-786777	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1241122-1241157	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1430721-1430756	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	700986-701021	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	858135-858170	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	250460-250495	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	877024-877059	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1052925-1052960	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	613976-614011	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1205882-1205917	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	774965-775000	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1837807-1837842	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	251029-251064	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	862481-862516	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1185749-1185784	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	790211-790246	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	689547-689582	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	788811-788846	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	975900-975935	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	293510-293545	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	786004-786039	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1199265-1199300	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	862470-862505	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	975867-975902	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	975868-975903	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	756618-756653	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	851990-852025	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	896715-896750	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	1175425-1175460	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	791344-791379	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	772038-772073	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	826279-826314	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	863153-863188	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1288441-1288476	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	851986-852021	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	941484-941519	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	975866-975901	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	756641-756676	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	975881-975916	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	896717-896752	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	1202224-1202259	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	975892-975927	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	975870-975905	8	0.778
NZ_AP019797_6	6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1675519-1675554	36	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	1202224-1202259	8	0.778
NZ_AP019797_12	12.35|2075231|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2075231-2075267	37	NC_008243	Chelativorans sp. BNC1 plasmid 2, complete sequence	11743-11779	8	0.784
NZ_AP019797_3	3.37|553214|33|NZ_AP019797|PILER-CR,CRT	553214-553246	33	MK937611	Gordonia phage Verity, complete genome	53072-53104	9	0.727
NZ_AP019797_3	3.37|553214|33|NZ_AP019797|PILER-CR,CRT	553214-553246	33	MF324914	Mycobacterium phage Krueger, complete genome	45209-45241	9	0.727
NZ_AP019797_3	3.38|551019|32|NZ_AP019797|CRISPRCasFinder	551019-551050	32	KU682439	Stenotrophomonas phage vB_SmaS-DLP_6, complete genome	161969-162000	9	0.719
NZ_AP019797_3	3.42|551263|32|NZ_AP019797|CRISPRCasFinder	551263-551294	32	NZ_CP035000	Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence	414842-414873	9	0.719
NZ_AP019797_3	3.46|551507|32|NZ_AP019797|CRISPRCasFinder	551507-551538	32	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	377488-377519	9	0.719
NZ_AP019797_3	3.48|551629|32|NZ_AP019797|CRISPRCasFinder	551629-551660	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1408701-1408732	9	0.719
NZ_AP019797_3	3.50|551751|32|NZ_AP019797|CRISPRCasFinder	551751-551782	32	NZ_CP011920	Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence	100308-100339	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_KX709966	Pseudomonas aeruginosa strain IP40a plasmid pIP40a, complete sequence	39197-39228	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NC_016036	Morganella morganii strain M203 plasmid R485 complete sequence	47485-47516	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_KX156772	Escherichia coli strain K-12 plasmid IP40a, complete sequence	41979-42010	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_KX156773	Escherichia coli strain K-12 plasmid R16a, complete sequence	39208-39239	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP022964	Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence	19154-19185	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NC_016113	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence	684336-684367	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NC_017585	Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence	1128735-1128766	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP017055	Providencia stuartii strain BE2467 plasmid pPS1, complete sequence	107798-107829	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	LT605060	Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2	7475-7506	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP021695	Proteus mirabilis strain AR_0155 plasmid tig00000123, complete sequence	94246-94277	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_LT985315	Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence	7388-7419	9	0.719
NZ_AP019797_3	3.51|551812|32|NZ_AP019797|CRISPRCasFinder	551812-551843	32	NZ_CP012005	Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence	89984-90015	9	0.719
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1664194-1664225	9	0.719
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	795858-795889	9	0.719
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1383201-1383232	9	0.719
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1150478-1150509	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	237419-237450	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	209434-209465	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	180627-180658	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	189295-189326	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	180714-180745	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	CP054909	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence	58650-58681	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	25600-25631	9	0.719
NZ_AP019797_3	3.56|552117|32|NZ_AP019797|CRISPRCasFinder	552117-552148	32	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	85675-85706	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NC_017533	Pantoea ananatis AJ13355 plasmid pEA320, complete sequence	237419-237450	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NC_016817	Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence	209434-209465	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NZ_CP020944	Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence	180627-180658	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NZ_CP014208	Pantoea ananatis strain R100 plasmid, complete sequence	189295-189326	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NC_017553	Pantoea ananatis PA13 plasmid PAGR_p, complete sequence	180714-180745	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	CP054909	Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence	58650-58681	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NZ_CP022429	Pantoea ananatis strain YJ76 plasmid p_unamed1	25600-25631	9	0.719
NZ_AP019797_3	3.64|552605|32|NZ_AP019797|CRISPRCasFinder	552605-552636	32	NZ_CP035036	Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence	85675-85706	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP009573	Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence	32706-32737	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP009155	Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence	98089-98120	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP015032	Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence	38797-38828	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP042167	Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence	105679-105710	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP028810	Burkholderia contaminans strain SK875 plasmid p875, complete sequence	96058-96089	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP046610	Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence	22548-22579	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NC_008545	Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence	26827-26858	9	0.719
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	MK359359	Mycobacterium phage Colt, complete genome	9069-9100	9	0.719
NZ_AP019797_3	3.72|553093|32|NZ_AP019797|CRISPRCasFinder	553093-553124	32	NZ_CP045273	Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence	1054692-1054723	9	0.719
NZ_AP019797_3	3.72|553093|32|NZ_AP019797|CRISPRCasFinder	553093-553124	32	CP000314	Clostridium perfringens SM101 plasmid pSM101B, complete sequence	507-538	9	0.719
NZ_AP019797_3	3.73|553154|32|NZ_AP019797|CRISPRCasFinder	553154-553185	32	KR063281	Gordonia phage GMA2, complete genome	34970-35001	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP023721	Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence	91763-91794	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP024587	Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence	3221-3252	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	MF324914	Mycobacterium phage Krueger, complete genome	45210-45241	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_LR134465	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence	277597-277628	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	85676-85707	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP021802	Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence	832063-832094	9	0.719
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP043441	Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence	1585403-1585434	9	0.719
NZ_AP019797_4	4.33|569252|32|NZ_AP019797|PILER-CR,CRISPRCasFinder	569252-569283	32	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	306340-306371	9	0.719
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_CP011248	Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence	335628-335659	9	0.719
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	606338-606369	9	0.719
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	606421-606452	9	0.719
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	NZ_CP014802	Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence	114557-114588	9	0.719
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	MN629346	Aeromonas caviae strain 1507-17068 plasmid p717068-IMP, complete sequence	79808-79839	9	0.719
NZ_AP019797_4	4.36|569435|32|NZ_AP019797|CRISPRCasFinder	569435-569466	32	MG198783	Gordonia phage Mahdia, complete genome	4053-4084	9	0.719
NZ_AP019797_4	4.39|569618|32|NZ_AP019797|CRISPRCasFinder	569618-569649	32	AP013385	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C16-MedDCM-OCT-S39-C44	21747-21778	9	0.719
NZ_AP019797_4	4.39|569618|32|NZ_AP019797|CRISPRCasFinder	569618-569649	32	AP013398	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C38	7336-7367	9	0.719
NZ_AP019797_4	4.40|569679|32|NZ_AP019797|CRISPRCasFinder	569679-569710	32	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	369300-369331	9	0.719
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	263208-263239	9	0.719
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NZ_CP025617	Micrococcus luteus strain SGAir0127 plasmid pSGAir0127	59731-59762	9	0.719
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NC_024972	Micrococcus sp. A1 plasmid pLMA1, complete sequence	35875-35906	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NC_023722	Rhodococcus phage ReqiPine5, complete genome	56737-56768	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NC_008712	Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence	43929-43960	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NC_012723	Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence	38056-38087	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	MN657159	Sphingomonas sp. strain ANT_H46B plasmid pA46BH3, complete sequence	15225-15256	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP009432	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence	100206-100237	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP035903	Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence	99158-99189	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_AP014802	Rhodovulum sulfidophilum plasmid Plasmid2 DNA, complete genome, strain: DSM 2351	80245-80276	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP052865	Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence	136320-136351	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NC_020548	Azoarcus sp. KH32C plasmid pAZKH, complete sequence	127516-127547	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP047317	Burkholderia glumae AU6208 plasmid pwszb, complete sequence	100855-100886	9	0.719
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	MK305891	Streptomyces phage Gibson, complete genome	58914-58945	9	0.719
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NC_016587	Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence	130581-130612	9	0.719
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NZ_CP045217	Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence	49811-49842	9	0.719
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NZ_CP049249	Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence	417624-417655	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MT639643	Microbacterium phage FreddieHg, complete genome	18540-18571	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MT818420	Microbacterium phage Gilda, complete genome	19363-19394	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MK737941	Microbacterium phage Rachella, complete genome	19365-19396	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MT522001	Microbacterium phage Karate, complete genome	19387-19418	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MK801732	Microbacterium phage NarutoRun, complete genome	19362-19393	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	NC_047986	Microbacterium phage Krampus, complete genome	19369-19400	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MK801731	Microbacterium phage Anakin, complete genome	19362-19393	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MN497954	Microbacterium phage Hiddenleaf, complete genome	18524-18555	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MH271292	Microbacterium phage AnnaSerena, complete genome	19371-19402	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MT684591	Microbacterium phage Chivey, complete genome	18524-18555	9	0.719
NZ_AP019797_4	4.51|570350|32|NZ_AP019797|CRISPRCasFinder	570350-570381	32	MT684592	Microbacterium phage Aesir, complete genome	19108-19139	9	0.719
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	NZ_CP018080	Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence	49267-49298	9	0.719
NZ_AP019797_4	4.55|570594|32|NZ_AP019797|CRISPRCasFinder	570594-570625	32	NZ_CP017591	Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence	77464-77495	9	0.719
NZ_AP019797_4	4.55|570594|32|NZ_AP019797|CRISPRCasFinder	570594-570625	32	NZ_CP049116	Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence	43494-43525	9	0.719
NZ_AP019797_4	4.65|569739|33|NZ_AP019797|PILER-CR	569739-569771	33	NZ_CP042825	Rhizobium sp. WL3 plasmid unnamed2, complete sequence	341649-341681	9	0.727
NZ_AP019797_4	4.68|569922|33|NZ_AP019797|PILER-CR	569922-569954	33	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	106109-106141	9	0.727
NZ_AP019797_6	6.5|1674646|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1674646-1674681	36	NZ_CP021028	Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence	199372-199407	9	0.75
NZ_AP019797_6	6.5|1674646|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT	1674646-1674681	36	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	383998-384033	9	0.75
NZ_AP019797_10	10.16|1725204|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	1725204-1725241	38	MN234226	Mycobacterium phage Curiosium, complete genome	49582-49619	9	0.763
NZ_AP019797_12	12.27|2074700|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2074700-2074735	36	NZ_CP016617	Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence	294193-294228	9	0.75
NZ_AP019797_3	3.11|551628|33|NZ_AP019797|PILER-CR,CRT	551628-551660	33	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	568330-568362	10	0.697
NZ_AP019797_3	3.14|551811|33|NZ_AP019797|PILER-CR,CRT	551811-551843	33	KF024727	Mycobacterium phage Reprobate, complete genome	1612-1644	10	0.697
NZ_AP019797_3	3.15|551872|33|NZ_AP019797|PILER-CR,CRT	551872-551904	33	NZ_CP032322	Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence	1664193-1664225	10	0.697
NZ_AP019797_3	3.15|551872|33|NZ_AP019797|PILER-CR,CRT	551872-551904	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	795858-795890	10	0.697
NZ_AP019797_3	3.15|551872|33|NZ_AP019797|PILER-CR,CRT	551872-551904	33	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1383201-1383233	10	0.697
NZ_AP019797_3	3.15|551872|33|NZ_AP019797|PILER-CR,CRT	551872-551904	33	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1150478-1150510	10	0.697
NZ_AP019797_3	3.31|552848|33|NZ_AP019797|PILER-CR,CRT	552848-552880	33	NZ_CP009573	Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence	32705-32737	10	0.697
NZ_AP019797_3	3.37|553214|33|NZ_AP019797|PILER-CR,CRT	553214-553246	33	NZ_CP023721	Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence	91762-91794	10	0.697
NZ_AP019797_3	3.47|551568|32|NZ_AP019797|CRISPRCasFinder	551568-551599	32	NZ_CP017077	Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence	408251-408282	10	0.688
NZ_AP019797_3	3.48|551629|32|NZ_AP019797|CRISPRCasFinder	551629-551660	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	568331-568362	10	0.688
NZ_AP019797_3	3.52|551873|32|NZ_AP019797|CRISPRCasFinder	551873-551904	32	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	69545-69576	10	0.688
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	801939-801970	10	0.688
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	520361-520392	10	0.688
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	709121-709152	10	0.688
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1100139-1100170	10	0.688
NZ_AP019797_3	3.58|552239|32|NZ_AP019797|CRISPRCasFinder	552239-552270	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	661474-661505	10	0.688
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	801939-801970	10	0.688
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NZ_CP021827	Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence	520361-520392	10	0.688
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NZ_CP021830	Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence	709121-709152	10	0.688
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	1100139-1100170	10	0.688
NZ_AP019797_3	3.66|552727|32|NZ_AP019797|CRISPRCasFinder	552727-552758	32	NZ_CP021805	Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence	661474-661505	10	0.688
NZ_AP019797_3	3.70|552971|32|NZ_AP019797|CRISPRCasFinder	552971-553002	32	NC_010381	Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequence	154619-154650	10	0.688
NZ_AP019797_3	3.72|553093|32|NZ_AP019797|CRISPRCasFinder	553093-553124	32	NZ_CP048111	Klebsiella michiganensis strain BD177 plasmid unnamed3	104360-104391	10	0.688
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP040821	Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence	72446-72477	10	0.688
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	CP054921	Streptomyces sp. NA03103 plasmid unnamed1, complete sequence	106569-106600	10	0.688
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NC_023284	Streptomyces sp. F2 plasmid pFRL4, complete sequence	281642-281673	10	0.688
NZ_AP019797_4	4.33|569252|32|NZ_AP019797|PILER-CR,CRISPRCasFinder	569252-569283	32	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	286195-286226	10	0.688
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	4445338-4445369	10	0.688
NZ_AP019797_4	4.34|569313|32|NZ_AP019797|CRISPRCasFinder	569313-569344	32	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	50370-50401	10	0.688
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	252310-252341	10	0.688
NZ_AP019797_4	4.35|569374|32|NZ_AP019797|CRISPRCasFinder	569374-569405	32	MN585972	Arthrobacter phage Edmundo, complete genome	22155-22186	10	0.688
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	NC_041879	Bacillus phage Mgbh1, complete genome	56482-56513	10	0.688
NZ_AP019797_4	4.41|569740|32|NZ_AP019797|CRISPRCasFinder	569740-569771	32	KT381864	Thiobacimonas phage vB_ThpS-P1, complete genome	14298-14329	10	0.688
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP022417	Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence	40660-40691	10	0.688
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_CP015420	Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence	90134-90165	10	0.688
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_AP014801	Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351	106698-106729	10	0.688
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NZ_CP030129	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence	35464-35495	10	0.688
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NZ_CP029833	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence	362437-362468	10	0.688
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NC_013858	Azospirillum sp. B510 plasmid pAB510d, complete sequence	13013-13044	10	0.688
NZ_AP019797_4	4.49|570228|32|NZ_AP019797|CRISPRCasFinder	570228-570259	32	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	408101-408132	10	0.688
NZ_AP019797_4	4.53|570472|32|NZ_AP019797|CRISPRCasFinder	570472-570503	32	MF417880	Uncultured Caudovirales phage clone 9F_5, partial genome	38719-38750	10	0.688
NZ_AP019797_4	4.54|570533|32|NZ_AP019797|CRISPRCasFinder	570533-570564	32	MK388689	Pantoea phage vB_PagM_LIET2, complete genome	67656-67687	10	0.688
NZ_AP019797_4	4.65|569739|33|NZ_AP019797|PILER-CR	569739-569771	33	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	263207-263239	10	0.697
NZ_AP019797_4	4.68|569922|33|NZ_AP019797|PILER-CR	569922-569954	33	NC_023722	Rhodococcus phage ReqiPine5, complete genome	56736-56768	10	0.697
NZ_AP019797_4	4.73|570227|33|NZ_AP019797|PILER-CR	570227-570259	33	NZ_CP030129	Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence	35463-35495	10	0.697
NZ_AP019797_12	12.58|2076771|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2076771-2076807	37	NZ_CP015740	Shinella sp. HZN7 plasmid pShin-04, complete sequence	4763-4799	10	0.73
NZ_AP019797_3	3.35|553092|33|NZ_AP019797|PILER-CR,CRT	553092-553124	33	NZ_CP048111	Klebsiella michiganensis strain BD177 plasmid unnamed3	104360-104392	11	0.667
NZ_AP019797_3	3.42|551263|32|NZ_AP019797|CRISPRCasFinder	551263-551294	32	NZ_CP025614	Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence	223338-223369	11	0.656
NZ_AP019797_3	3.68|552849|32|NZ_AP019797|CRISPRCasFinder	552849-552880	32	NZ_CP029832	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence	457967-457998	11	0.656
NZ_AP019797_3	3.74|553215|32|NZ_AP019797|CRISPRCasFinder	553215-553246	32	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	630262-630293	11	0.656
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_AP014801	Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351	103440-103471	11	0.656
NZ_AP019797_4	4.44|569923|32|NZ_AP019797|CRISPRCasFinder	569923-569954	32	NZ_AP014801	Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351	105432-105463	11	0.656
NZ_AP019797_12	12.47|2076035|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2076035-2076070	36	NC_020062	Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence	1802163-1802198	11	0.694
NZ_AP019797_12	12.52|2076367|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2076367-2076402	36	NZ_CP010682	Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence	43245-43280	12	0.667
NZ_AP019797_12	12.52|2076367|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR	2076367-2076402	36	NZ_CP010644	Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence	43295-43330	12	0.667

1. spacer 3.36|553153|33|NZ_AP019797|PILER-CR,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 0, identity: 1.0

ttaccttcaatcggcacccttcttttggacgcc	CRISPR spacer
ttaccttcaatcggcacccttcttttggacgcc	Protospacer
*********************************

2. spacer 3.36|553153|33|NZ_AP019797|PILER-CR,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 0, identity: 1.0

ttaccttcaatcggcacccttcttttggacgcc	CRISPR spacer
ttaccttcaatcggcacccttcttttggacgcc	Protospacer
*********************************

3. spacer 3.73|553154|32|NZ_AP019797|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 0, identity: 1.0

taccttcaatcggcacccttcttttggacgcc	CRISPR spacer
taccttcaatcggcacccttcttttggacgcc	Protospacer
********************************

4. spacer 3.73|553154|32|NZ_AP019797|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 0, identity: 1.0

taccttcaatcggcacccttcttttggacgcc	CRISPR spacer
taccttcaatcggcacccttcttttggacgcc	Protospacer
********************************

5. spacer 6.4|1674578|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 0, identity: 1.0

tctggatggaaggtgagaaagcctataagcggcttccg	CRISPR spacer
tctggatggaaggtgagaaagcctataagcggcttccg	Protospacer
**************************************

6. spacer 6.4|1674578|38|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 0, identity: 1.0

tctggatggaaggtgagaaagcctataagcggcttccg	CRISPR spacer
tctggatggaaggtgagaaagcctataagcggcttccg	Protospacer
**************************************

7. spacer 14.1|3046488|35|NZ_AP019797|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 1, identity: 0.971

ttatctcagaaacaaatatggatcaccggaaaaaa	CRISPR spacer
ctatctcagaaacaaatatggatcaccggaaaaaa	Protospacer
.**********************************

8. spacer 14.1|3046488|35|NZ_AP019797|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 1, identity: 0.971

ttatctcagaaacaaatatggatcaccggaaaaaa	CRISPR spacer
ctatctcagaaacaaatatggatcaccggaaaaaa	Protospacer
.**********************************

9. spacer 15.3|3368684|20|NZ_AP019797|PILER-CR matches to MH834627 (Arthrobacter phage Ryan, complete genome) position: , mismatch: 1, identity: 0.95

agtagcgtcgcctgcgccga	CRISPR spacer
ggtagcgtcgcctgcgccga	Protospacer
.*******************

10. spacer 3.35|553092|33|NZ_AP019797|PILER-CR,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.939

tcattcaggatatcataaaatccacctatgact	CRISPR spacer
tcattcaggatataataaaatccacctatggct	Protospacer
************* ****************.**

11. spacer 3.35|553092|33|NZ_AP019797|PILER-CR,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.939

tcattcaggatatcataaaatccacctatgact	CRISPR spacer
tcattcaggatataataaaatccacctatggct	Protospacer
************* ****************.**

12. spacer 3.72|553093|32|NZ_AP019797|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.938

cattcaggatatcataaaatccacctatgact	CRISPR spacer
cattcaggatataataaaatccacctatggct	Protospacer
************ ****************.**

13. spacer 3.72|553093|32|NZ_AP019797|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.938

cattcaggatatcataaaatccacctatgact	CRISPR spacer
cattcaggatataataaaatccacctatggct	Protospacer
************ ****************.**

14. spacer 4.56|570655|32|NZ_AP019797|CRISPRCasFinder matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.938

ctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
ctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
****.************************ **

15. spacer 4.56|570655|32|NZ_AP019797|CRISPRCasFinder matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.938

ctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
ctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
****.************************ **

16. spacer 4.80|570654|33|NZ_AP019797|PILER-CR matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 2, identity: 0.939

cctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
*****.************************ **

17. spacer 4.80|570654|33|NZ_AP019797|PILER-CR matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 2, identity: 0.939

cctttaaaggttgtggcgtttggtttcgtgtgc	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggc	Protospacer
*****.************************ **

18. spacer 12.5|2073244|34|NZ_AP019797|CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 4, identity: 0.882

gcgacggacgggagtggtccccgcctcgtggaga	CRISPR spacer
acggcggatgggagtggtccccgcctcgtggaaa	Protospacer
.**.****.***********************.*

19. spacer 12.5|2073244|34|NZ_AP019797|CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 4, identity: 0.882

gcgacggacgggagtggtccccgcctcgtggaga	CRISPR spacer
acggcggatgggagtggtccccgcctcgtggaaa	Protospacer
.**.****.***********************.*

20. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 5, identity: 0.821

aacacggccgcacctccgctccg--accgg	CRISPR spacer
tacacggccgcaccgccgctccgcaatc--	Protospacer
 ************* ********  *.*  

21. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to MK524490 (Mycobacterium phage Donny, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

22. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to MH727561 (Mycobacterium phage Serendipitous, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

23. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to JN699007 (Mycobacterium phage Acadian, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

24. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to MT889381 (Mycobacterium phage Suigeneris, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

25. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to KY224000 (Mycobacterium phage Rich, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

26. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to KR080199 (Mycobacterium phage Baee, complete genome) position: , mismatch: 6, identity: 0.818

--ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tgccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  **** .***  ******.**************.

27. spacer 3.41|551202|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP043850 (Micrococcus luteus strain NCCP 15687 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

gtgagccgccagggcgaagtgccctggcgctt-	CRISPR spacer
gtgacccgccagggcgcagtg-cctggtgcgcg	Protospacer
**** *********** **** *****.** . 

28. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to MK524490 (Mycobacterium phage Donny, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

29. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to MH727561 (Mycobacterium phage Serendipitous, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

30. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to JN699007 (Mycobacterium phage Acadian, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

31. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to MT889381 (Mycobacterium phage Suigeneris, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

32. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to KY224000 (Mycobacterium phage Rich, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

33. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to KR080199 (Mycobacterium phage Baee, complete genome) position: , mismatch: 6, identity: 0.812

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gccgcgatct--ccggcggcgatgcgccgggcca	Protospacer
  *** .***  ******.**************.

34. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NC_015057 (Granulicella tundricola MP5ACTX9 plasmid pACIX901, complete sequence) position: , mismatch: 6, identity: 0.812

tttctggagcacgacgagctgctcggcgagcg--	CRISPR spacer
attctggatcacgacgcgctgctc--cgggcgat	Protospacer
 ******* ******* *******  **.***  

35. spacer 4.36|569435|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP019642 (Planococcus sp. Y42 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.812

tgcgctttgacggactcggccacctgcaccag	CRISPR spacer
tgtactttgatcgactcggccacctgcacgaa	Protospacer
**..******. ***************** *.

36. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 6, identity: 0.812

tcctcgatcggcacggcctcgacgctgcggtc-	CRISPR spacer
cgctcgatcgcgacggcctcgacgc-gctgtcg	Protospacer
. ********  ************* ** *** 

37. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050096 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b3, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *  

38. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050084 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b2, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcactaggtcgcggatttcatcgtcgctca	Protospacer
*.****.******** ************ *  

39. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050102 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b2, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *  

40. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050107 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b1, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *  

41. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050112 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b5, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *  

42. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP048285 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248a, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcaccaggtcgcggatctcatcgtcgctca	Protospacer
*.************* **.********* *  

43. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP053209 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1A, complete sequence) position: , mismatch: 6, identity: 0.812

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcactaggtcgcggatttcatcgtcgctca	Protospacer
*.****.******** ************ *  

44. spacer 12.35|2075231|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015739 (Shinella sp. HZN7 plasmid pShin-03, complete sequence) position: , mismatch: 6, identity: 0.838

gcggccgggcggcccggtgatctgct-ccaggcccgtc	CRISPR spacer
gcggccgggcggcacggtgagctgctggcgcgcccgt-	Protospacer
************* ****** *****  *. ****** 

45. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcacctccgctccgaccgg	CRISPR spacer
cgttcggccgcaccgccgcttcgaccgg	Protospacer
 .. ********** *****.*******

46. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcacctccgctccgaccgg	CRISPR spacer
cgaagggccgcacctccgccccgaccag	Protospacer
 . * **************.******.*

47. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcacctccgctccgaccgg	CRISPR spacer
cgaagggccgcacctccgccccgaccag	Protospacer
 . * **************.******.*

48. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NZ_CP032324 (Azospirillum brasilense strain MTCC4035 plasmid p3, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcacctccgctccgaccgg	CRISPR spacer
cgaagggccgcacctccgccccgaccag	Protospacer
 . * **************.******.*

49. spacer 15.1|3368594|28|NZ_AP019797|PILER-CR matches to NZ_CP007797 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p4, complete sequence) position: , mismatch: 6, identity: 0.786

aacacggccgcacctccgctccgaccgg	CRISPR spacer
cgaagggccgcacctccgccccgaccag	Protospacer
 . * **************.******.*

50. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.788

ccgccgt-ctcaccggcgacgatgcgccgggccg	CRISPR spacer
-cgtcgcgctcaccggcgacgatgacccgggcaa	Protospacer
 **.**. ****************  ****** .

51. spacer 3.21|552238|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP007792 (Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence) position: , mismatch: 7, identity: 0.788

caaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ccaatcggaggcggaaccttgaaggtcgaggtc	Protospacer
* ** ************* ********* .*. 

52. spacer 3.29|552726|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP007792 (Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence) position: , mismatch: 7, identity: 0.788

caaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ccaatcggaggcggaaccttgaaggtcgaggtc	Protospacer
* ** ************* ********* .*. 

53. spacer 3.31|552848|33|NZ_AP019797|PILER-CR,CRT matches to MN617843 (Mycobacterium phage Quesadilla, complete genome) position: , mismatch: 7, identity: 0.788

ccgatctggctccggcgcccgagcggcttcaag---	CRISPR spacer
ccgatctggctccagcgcgcga---gcttcccgctc	Protospacer
*************.**** ***   *****  *   

54. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 7, identity: 0.781

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
agccgtctcaccggcgacgctgcgataggcat	Protospacer
 ****************** **** ..***  

55. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 7, identity: 0.781

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
agccgtctcaccggcgacgctgcgataggcat	Protospacer
 ****************** **** ..***  

56. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 7, identity: 0.781

cgccgt-ctcaccggcgacgatgcgccgggccg	CRISPR spacer
-gtcgcgctcaccggcgacgatgacccgggcaa	Protospacer
 *.**. ****************  ****** .

57. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to KF024727 (Mycobacterium phage Reprobate, complete genome) position: , mismatch: 7, identity: 0.781

--cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
ggtgtggtct--ccggcggcgatgcgccgggcca	Protospacer
  .*. ****  ******.**************.

58. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP007792 (Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
caatcggaggcggaaccttgaaggtcgaggtc	Protospacer
 ** ************* ********* .*. 

59. spacer 3.60|552361|32|NZ_AP019797|CRISPRCasFinder matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 7, identity: 0.781

ttttgcgggtgacggcaccgcctacgatattg	CRISPR spacer
tgttcattgtgacagcaccgcctacgatcttg	Protospacer
* **    *****.************** ***

60. spacer 3.61|552422|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP031947 (Ruegeria sp. AD91A plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.781

tcacaaaatctttacacgtccgtgcgggtccc	CRISPR spacer
tatcaaaatctttccacgtccgtgcggcacgg	Protospacer
*  ********** *************  *  

61. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP007792 (Corynebacterium marinum DSM 44953 plasmid pCmarinum1, complete sequence) position: , mismatch: 7, identity: 0.781

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
caatcggaggcggaaccttgaaggtcgaggtc	Protospacer
 ** ************* ********* .*. 

62. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to MN617843 (Mycobacterium phage Quesadilla, complete genome) position: , mismatch: 7, identity: 0.781

cgatctggctccggcgcccgagcggcttcaag---	CRISPR spacer
cgatctggctccagcgcgcga---gcttcccgctc	Protospacer
************.**** ***   *****  *   

63. spacer 3.69|552910|32|NZ_AP019797|CRISPRCasFinder matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 7, identity: 0.781

ttcccgcgcttcctaccacaggcttcgtcacg-	CRISPR spacer
ttcccgcgcttcctgccgcaggc-aggtggcga	Protospacer
**************.**.*****   ** .** 

64. spacer 3.69|552910|32|NZ_AP019797|CRISPRCasFinder matches to NC_009467 (Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence) position: , mismatch: 7, identity: 0.781

ttcccgcgcttcctaccacaggcttcgtcacg-	CRISPR spacer
ttcccgcgcttcctgccgcaggc-aggtggcga	Protospacer
**************.**.*****   ** .** 

65. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP027794 (Rhodococcus hoagii strain DSSKP-R-001 plasmid plas1, complete sequence) position: , mismatch: 7, identity: 0.781

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
cttcacgttcacgccgtgctgctcggcgagcg	Protospacer
.***  *  **** ** ***************

66. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP013072 (Sphingobium indicum B90A plasmid pSRL2, complete sequence) position: , mismatch: 7, identity: 0.781

tttctggagcacgacgagctgctcggcgagcg-	CRISPR spacer
gaactggagcacggcgagccgctcgg-gcgcga	Protospacer
   **********.*****.****** * *** 

67. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP022334 (Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence) position: , mismatch: 7, identity: 0.781

---tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
aaatttc---agcacgcccagctgctcggcgaggt	Protospacer
   ****   ****** * **************  

68. spacer 4.27|570654|38|NZ_AP019797|CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 7, identity: 0.816

cctttaaaggttgtggcgtttggtttcgtgtgcggtgt	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggctactg	Protospacer
*****.************************ ** ..  

69. spacer 4.27|570654|38|NZ_AP019797|CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 7, identity: 0.816

cctttaaaggttgtggcgtttggtttcgtgtgcggtgt	CRISPR spacer
cctttgaaggttgtggcgtttggtttcgtgggctactg	Protospacer
*****.************************ ** ..  

70. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 7, identity: 0.781

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
ccgatcttctggtagccgatccggaattcctt	Protospacer
.******.***** ***********   *** 

71. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to MT310863 (Streptomyces phage Issmi, complete genome) position: , mismatch: 7, identity: 0.781

tcgatctcctggtcgccgatccggatgacctg----	CRISPR spacer
ccgagctcctggtcgccgatgcgg----cctgggag	Protospacer
.*** *************** ***    ****    

72. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 7, identity: 0.781

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gcctcgatcggcaccgccacgacgctcctgcg	Protospacer
 ************* *** ******* * *. 

73. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.781

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ccctcgagcggcacggcatcgacgccgagtac	Protospacer
.****** ********* *******.* *  *

74. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 7, identity: 0.781

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
tcggcgatcggcaccgcgtcgacgctgctggg	Protospacer
**  ********** ** ********** *  

75. spacer 4.46|570045|32|NZ_AP019797|CRISPRCasFinder matches to MG592671 (Vibrio phage 2.275.O._10N.286.54.E11, partial genome) position: , mismatch: 7, identity: 0.781

caaagagatatgtcaactggcgtatcggggga	CRISPR spacer
agaagagatatgacaactcgcgtatcgaatga	Protospacer
 .********** ***** ********.. **

76. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NC_019847 (Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

77. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

78. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

79. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.781

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
cagcaccacgtcgcgcacttcatcgtcaacat	Protospacer
* ****** ********.*********.*...

80. spacer 4.54|570533|32|NZ_AP019797|CRISPRCasFinder matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 7, identity: 0.781

acgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
agcaactcatccggcaccaccggcaccggctg	Protospacer
*  ** ***** *************** * * 

81. spacer 4.59|570838|32|NZ_AP019797|CRISPRCasFinder matches to MN694501 (Marine virus AFVG_250M1038, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . *** 

82. spacer 4.59|570838|32|NZ_AP019797|CRISPRCasFinder matches to MN694756 (Marine virus AFVG_250M15, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cataccaacagagccatgtgatccgtacatta-	Protospacer
** *************** *** *** . *.* 

83. spacer 4.59|570838|32|NZ_AP019797|CRISPRCasFinder matches to MN694135 (Marine virus AFVG_250M1039, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . *** 

84. spacer 4.59|570838|32|NZ_AP019797|CRISPRCasFinder matches to MN694550 (Marine virus AFVG_250M60, complete genome) position: , mismatch: 7, identity: 0.781

caaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
cacaccaacagagccatgtgatccgagcatca-	Protospacer
** *************** *** **  . *** 

85. spacer 4.60|569434|33|NZ_AP019797|PILER-CR matches to NZ_CP019642 (Planococcus sp. Y42 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

ttgcgctttgacggactcggccacctgcaccag	CRISPR spacer
ctgtactttgatcgactcggccacctgcacgaa	Protospacer
.**..******. ***************** *.

86. spacer 4.70|570044|33|NZ_AP019797|PILER-CR matches to MG592671 (Vibrio phage 2.275.O._10N.286.54.E11, partial genome) position: , mismatch: 7, identity: 0.788

gcaaagagatatgtcaactggcgtatcggggga	CRISPR spacer
gagaagagatatgacaactcgcgtatcgaatga	Protospacer
* .********** ***** ********.. **

87. spacer 4.83|570837|33|NZ_AP019797|PILER-CR matches to MN694501 (Marine virus AFVG_250M1038, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . *** 

88. spacer 4.83|570837|33|NZ_AP019797|PILER-CR matches to MN694135 (Marine virus AFVG_250M1039, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . *** 

89. spacer 4.83|570837|33|NZ_AP019797|PILER-CR matches to MN694756 (Marine virus AFVG_250M15, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccataccaacagagccatgtgatccgtacatta-	Protospacer
*** *************** *** *** . *.* 

90. spacer 4.83|570837|33|NZ_AP019797|PILER-CR matches to MN694550 (Marine virus AFVG_250M60, complete genome) position: , mismatch: 7, identity: 0.788

ccaaaccaacagagccatgagat-cgtctctcac	CRISPR spacer
ccacaccaacagagccatgtgatccgagcatca-	Protospacer
*** *************** *** **  . *** 

91. spacer 12.63|2077104|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015881 (Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence) position: , mismatch: 7, identity: 0.8

gggcgccgtgccgtcgcctgcagccacgaccgtca	CRISPR spacer
gagggttgagccgtcgccttcggccacgaccgtca	Protospacer
*.* *..* ********** *.*************

92. spacer 12.63|2077104|35|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030263 (Ensifer adhaerens strain Corn53 plasmid AA, complete sequence) position: , mismatch: 7, identity: 0.8

gggcgccgtgccgtcgcctgcagccacgaccgtca	CRISPR spacer
gagggttgagccgtcgccttcggccacgaccgtca	Protospacer
*.* *..* ********** *.*************

93. spacer 3.9|551506|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ctcatctttcacggccggttgcggatcggccgg	CRISPR spacer
cttcgccaccacggccggttgctgaccggccgg	Protospacer
**.  *. .************* **.*******

94. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 8, identity: 0.758

ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
ctacaatctcaccgacgacgacgcgccgggtct	Protospacer
*..* .********.******.********.* 

95. spacer 3.23|552360|33|NZ_AP019797|PILER-CR,CRT matches to KY984068 (Erwinia phage vB_EamM_Y3, complete genome) position: , mismatch: 8, identity: 0.758

tttttgcgggtgacggcaccgcctacgatattg	CRISPR spacer
gtgttcattgtgacagcaccgcctacgatcttg	Protospacer
 * **    *****.************** ***

96. spacer 3.24|552421|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP031947 (Ruegeria sp. AD91A plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.758

ttcacaaaatctttacacgtccgtgcgggtccc	CRISPR spacer
gtatcaaaatctttccacgtccgtgcggcacgg	Protospacer
 *  ********** *************  *  

97. spacer 3.37|553214|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.758

ctttctgga------gcacgacgagctgctcggcgagcg	CRISPR spacer
------ggatgcccggctcgaccagctgctcggcgagcg	Protospacer
      ***      ** **** ****************

98. spacer 3.46|551507|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP025613 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcatctttcacggccggttgcggatcggccgg	CRISPR spacer
ttcgccaccacggccggttgctgaccggccgg	Protospacer
*.  *. .************* **.*******

99. spacer 3.46|551507|32|NZ_AP019797|CRISPRCasFinder matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 8, identity: 0.75

----tcatctttcacggccggttgcggatcggccgg	CRISPR spacer
agcgaca----tgacggccggtggcggagcggccgg	Protospacer
     **    * ********* ***** *******

100. spacer 3.47|551568|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP054622 (Azospirillum oryzae strain KACC 14407 plasmid unnamed7, complete sequence) position: , mismatch: 8, identity: 0.75

ggcacggagatcacgcagacgtccaccaagct	CRISPR spacer
gggccggagatcacggagacgttcaccgcgga	Protospacer
**  *********** ******.****. *  

101. spacer 3.47|551568|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP039651 (Azospirillum sp. TSA2s plasmid p1) position: , mismatch: 8, identity: 0.75

ggcacggagatcacgcagacgtccaccaagct	CRISPR spacer
gggccggagatcacggagacgttcaccgcgga	Protospacer
**  *********** ******.****. *  

102. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tacaatctcaccgacgacgacgcgccgggtct	Protospacer
..* .********.******.********.* 

103. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NC_012858 (Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132502, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
agccgtctcaccggcaacgctgcgataggcaa	Protospacer
 **************.*** **** ..*** .

104. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP014526 (Haematospirillum jordaniae strain H5569 plasmid unnamed 1, complete sequence) position: , mismatch: 8, identity: 0.75

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tccggccacacccgcgacgttgcgccgggcca	Protospacer
. * *.* **** ****** ***********.

105. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 8, identity: 0.75

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
cggcggcgcgggtgatcccccgcccgatcagc	Protospacer
****************** *.**.*  .*.* 

106. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
cggcggcgcgggtgatcccccgcccgatcagc	Protospacer
****************** *.**.*  .*.* 

107. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032348 (Azospirillum brasilense strain MTCC4039 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
cggcggcgcgggtgatcccccgcccgatcagc	Protospacer
****************** *.**.*  .*.* 

108. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 8, identity: 0.75

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
cggcggcgcgggtgatcccccgcccgatcagc	Protospacer
****************** *.**.*  .*.* 

109. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to MK937611 (Gordonia phage Verity, complete genome) position: , mismatch: 8, identity: 0.75

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gccggcgagcacgacgagctgctcggtgagct	Protospacer
 ..   ********************.**** 

110. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_LR134470 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 28, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
cgccgtgagcgcgacgagctgctcggcgaagg	Protospacer
. .*  ****.******************. *

111. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP010990 (Pseudonocardia sp. EC080625-04 plasmid pFRP1-1, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
ctcgtgatgcaccccgagctgctcggcgagcc	Protospacer
.*. **. ****  ***************** 

112. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP012186 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-1, complete sequence) position: , mismatch: 8, identity: 0.75

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
ctcgtgatgcaccccgagctgctcggcgagcc	Protospacer
.*. **. ****  ***************** 

113. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_LT559121 (Nonomuraea gerenzanensis isolate nono1 plasmid II, complete sequence) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
gcgccgatgcccgtcctgctgggcctggtcga	Protospacer
*  *   * ***.************* *****

114. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to CP054917 (Streptomyces sp. NA02950 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
gaccgtctccccgtcctgcttggtcagctccc	Protospacer
************.******* **.*   **  

115. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to MN369759 (Mycobacterium phage Mithril, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
cgcggtgcgcccctcctgccgggccttgtcga	Protospacer
 .* ** . *** ******.************

116. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to MN428050 (Mycobacterium phage Apex, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
cgcggtgcgcccctcctgccgggccttgtcga	Protospacer
 .* ** . *** ******.************

117. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to MN234171 (Mycobacterium phage Magpie, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
ctcggtgcgcccctcctgccgggccttgtcga	Protospacer
  * ** . *** ******.************

118. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to KX589269 (Mycobacterium phage Fortunato, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
ctcggtgcgcccctcctgccgggccttgtcga	Protospacer
  * ** . *** ******.************

119. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to MT639648 (Mycobacterium phage Heath, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
ctcggtgcgcccctcctgccgggccttgtcga	Protospacer
  * ** . *** ******.************

120. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NC_042034 (Mycobacterium phage ChrisnMich, complete sequence) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
ctcggtgcgcccctcctgccgggccttgtcga	Protospacer
  * ** . *** ******.************

121. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NC_022331 (Mycobacterium phage Bane1, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
cgcggtgcgcccctcctgccgggccttgtcga	Protospacer
 .* ** . *** ******.************

122. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to KF279413 (Mycobacterium phage Bane2, complete genome) position: , mismatch: 8, identity: 0.75

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
cgcggtgcgcccctcctgccgggccttgtcga	Protospacer
 .* ** . *** ******.************

123. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP024582 (Roseomonas sp. FDAARGOS_362 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
cggaggcactggtcggcgatccggatgccctg	Protospacer
. **  . ******* *********** ****

124. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 8, identity: 0.75

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
cggaggcactggtcggcgatccggatgccctg	Protospacer
. **  . ******* *********** ****

125. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to MF140418 (Arthrobacter phage LiSara, complete genome) position: , mismatch: 8, identity: 0.75

tcgatctc---ctggtcgccgatccggatgacctg	CRISPR spacer
---aacccaagctggtcgccgttctggatgacctt	Protospacer
   * *.*   ********** **.********* 

126. spacer 4.36|569435|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP005961 (Pseudomonas mandelii JR-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tgcgctttgacggactcggccacctgcaccag---	CRISPR spacer
ggcgctttgccggagtcggccac---catctgttc	Protospacer
 ******** **** ********   **.* *   

127. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
tccacccgctccgtcgttccgtccgggaggta	Protospacer
  ********* **** **********  *. 

128. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
ccgatcaactcggtcgagccggccgggccgcc	Protospacer
   *.* .********* *** **********

129. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

agcacccgctcggtcgatccgtccgggccgcc----	CRISPR spacer
cgcacccgctcggtcga----accggcccgtcatga	Protospacer
 ****************     **** ***.*    

130. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
tcctcgatcgcctcggcctcgacgcgactccg	Protospacer
********** * ************ .*  . 

131. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP013104 (Paraburkholderia caribensis strain MWAP64 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ctcgcgatcggcacggtgtcgacgctgttgtt	Protospacer
..* ************. *********. **.

132. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ctcgcgatcggcacggtgtcgacgctgttgtt	Protospacer
..* ************. *********. **.

133. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP015369 (Methylobacterium phyllosphaerae strain CBMB27 plasmid CBMB27-p2, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
cgctcgatctgcacggcctcgatgcgggcgtg	Protospacer
. ******* ************.** *  ** 

134. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacg-ctgcggtc	CRISPR spacer
gcctcgatcggcccgggctcgacgaacatggt-	Protospacer
 *********** *** *******  ...*** 

135. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 8, identity: 0.75

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggcacggcgtcgaggccggcttc	Protospacer
  *************** **** **.*   **

136. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.* 

137. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.* 

138. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.75

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
gcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
 . ****.**********.********.*.* 

139. spacer 4.58|570777|32|NZ_AP019797|CRISPRCasFinder matches to CP032840 (Aeromonas veronii strain FC951 plasmid unnamed) position: , mismatch: 8, identity: 0.75

tctatcgagtcgggatcgatgatgccccgcca	CRISPR spacer
cccgtctggtcggcattgatgatgccccgccc	Protospacer
.*..** .***** **.************** 

140. spacer 4.65|569739|33|NZ_AP019797|PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

cagcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
ctccacccgctccgtcgttccgtccgggaggta	Protospacer
*  ********* **** **********  *. 

141. spacer 4.68|569922|33|NZ_AP019797|PILER-CR matches to NC_011758 (Methylorubrum extorquens CM4 plasmid pCMU01, complete sequence) position: , mismatch: 8, identity: 0.758

ttcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
agcctcgatcggcaccgccacgacgctcctgcg	Protospacer
  ************* *** ******* * *. 

142. spacer 4.68|569922|33|NZ_AP019797|PILER-CR matches to NZ_CP047175 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

ttcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gccctcgagcggcacggcatcgacgccgagtac	Protospacer
 .****** ********* *******.* *  *

143. spacer 4.68|569922|33|NZ_AP019797|PILER-CR matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 8, identity: 0.758

ttcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ctcggcgatcggcaccgcgtcgacgctgctggg	Protospacer
.**  ********** ** ********** *  

144. spacer 4.77|570471|33|NZ_AP019797|PILER-CR matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.* 

145. spacer 4.77|570471|33|NZ_AP019797|PILER-CR matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.* 

146. spacer 4.77|570471|33|NZ_AP019797|PILER-CR matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.758

tctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
tgcccaccgggtcgcgcatctcatcgtcaacgg	Protospacer
* . ****.**********.********.*.* 

147. spacer 4.78|570532|33|NZ_AP019797|PILER-CR matches to MK416007 (Klebsiella phage ST405-OXA48phi1.2, complete genome) position: , mismatch: 8, identity: 0.758

cacgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
tagcaactcatccggcaccaccggcaccggctg	Protospacer
.*  ** ***** *************** * * 

148. spacer 6.15|1675319|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017105 (Rhizobium gallicum strain IE4872 plasmid pRgalIE4872d, complete sequence) position: , mismatch: 8, identity: 0.778

acgaaggtcagatgcgcctcgtcggcgctcgagaac	CRISPR spacer
aagagcttcagatgcgcctcgttggcgctccagatg	Protospacer
* **.  ***************.******* ***  

149. spacer 6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********  

150. spacer 6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********  

151. spacer 6.16|1675385|37|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 8, identity: 0.784

tagtagaaggagagcgggccgctggccccgcgcttga	CRISPR spacer
ttgaagccggagagcgggcggctggcaccgcgcttct	Protospacer
* * **  *********** ****** ********  

152. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

153. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

154. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

155. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

156. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

157. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

158. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

159. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

160. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

161. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

162. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

163. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

164. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

165. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

166. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

167. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

168. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

169. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

170. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

171. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

172. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

173. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

174. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

175. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

176. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

177. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

178. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

179. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

180. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

181. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

182. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

183. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

184. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

185. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

186. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

187. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

188. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

189. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

190. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

191. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

192. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

193. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

194. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

195. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

196. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

197. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

198. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

199. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

200. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

201. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

202. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

203. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

204. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

205. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

206. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

207. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

208. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

209. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

210. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

211. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

212. spacer 6.18|1675519|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.778

agcgcaaacggtccgcgcgccgccgtgcgcgcgcag	CRISPR spacer
cgcgatggtggtgcgcgcgccgccgtgcgggcgcag	Protospacer
 ***  ...*** **************** ******

213. spacer 12.35|2075231|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NC_008243 (Chelativorans sp. BNC1 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.784

gcggccgggcggcccggtgatctgctccaggcccgtc--	CRISPR spacer
tcggccgggcggcagggtgatctgctcc--gtccagcgc	Protospacer
 ************  *************  *.**. *  

214. spacer 3.37|553214|33|NZ_AP019797|PILER-CR,CRT matches to MK937611 (Gordonia phage Verity, complete genome) position: , mismatch: 9, identity: 0.727

ctttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
ggccggcgagcacgacgagctgctcggtgagct	Protospacer
  ..   ********************.**** 

215. spacer 3.37|553214|33|NZ_AP019797|PILER-CR,CRT matches to MF324914 (Mycobacterium phage Krueger, complete genome) position: , mismatch: 9, identity: 0.727

ctttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
caaggcgtggcacgacgagccgatcggcgagcg	Protospacer
*    .* .***********.* **********

216. spacer 3.38|551019|32|NZ_AP019797|CRISPRCasFinder matches to KU682439 (Stenotrophomonas phage vB_SmaS-DLP_6, complete genome) position: , mismatch: 9, identity: 0.719

cgccttcctccaccccgttgacgagcgcctcg	CRISPR spacer
cgccttccaccactccgttgacgtcttcgatg	Protospacer
******** ****.*********  . *  .*

217. spacer 3.42|551263|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 9, identity: 0.719

tgctcggccggatgcggaacgacaacgggcgg	CRISPR spacer
tcaccggccagatgcggaacggcaacgagatc	Protospacer
*  .*****.***********.*****.*   

218. spacer 3.46|551507|32|NZ_AP019797|CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 9, identity: 0.719

tcatctttcacggccggttgcggatcggccgg	CRISPR spacer
cggtcaccgacggccggttgcgcatcggctgg	Protospacer
. .** .. ************* ******.**

219. spacer 3.48|551629|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

aaagccactggctcgctctgggtgacgatcca	CRISPR spacer
acgcttgccggctcgctctgggtgatgttcca	Protospacer
* . ...*.****************.* ****

220. spacer 3.50|551751|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP011920 (Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence) position: , mismatch: 9, identity: 0.719

ttgtcgagcggatcggtctcaacgtaggtggc	CRISPR spacer
ctgtcgagctgatcggtctcatcgagacgggt	Protospacer
.******** *********** ** ..  **.

221. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_KX709966 (Pseudomonas aeruginosa strain IP40a plasmid pIP40a, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

222. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NC_016036 (Morganella morganii strain M203 plasmid R485 complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

223. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_KX156772 (Escherichia coli strain K-12 plasmid IP40a, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

224. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_KX156773 (Escherichia coli strain K-12 plasmid R16a, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

225. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022964 (Salmonella enterica subsp. enterica serovar Pullorum strain QJ-2D-Sal plasmid pQJDsal1, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

226. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
ccggatcccaccggagacgatgcgccggatct	Protospacer
*   .**.****** *************..* 

227. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
ccggatcccaccggagacgatgcgccggatct	Protospacer
*   .**.****** *************..* 

228. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP017055 (Providencia stuartii strain BE2467 plasmid pPS1, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

229. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to LT605060 (Acinetobacter calcoaceticus strain NCTC7364 genome assembly, plasmid: 2) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

230. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021695 (Proteus mirabilis strain AR_0155 plasmid tig00000123, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

231. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_LT985315 (Escherichia coli strain ECOR 70 plasmid RCS99_p, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

232. spacer 3.51|551812|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP012005 (Acinetobacter baumannii strain ATCC 17978-mff plasmid pAB3, complete sequence) position: , mismatch: 9, identity: 0.719

cgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
gagcgcaacaccggcgacgatgcacagggcca	Protospacer
 . **.  ***************.* *****.

233. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
gcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
  .************* *.******** *  .

234. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
gcacggcgcgggtgatacgctgctcccgctcg	Protospacer
  .************* *.******** *  .

235. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
gcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
  .************* *.******** *  .

236. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
gcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
  .************* *.******** *  .

237. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

238. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

239. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

240. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

241. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

242. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to CP054909 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

243. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

244. spacer 3.56|552117|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

245. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NC_017533 (Pantoea ananatis AJ13355 plasmid pEA320, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

246. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NC_016817 (Pantoea ananatis LMG 5342 plasmid pPANA10, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

247. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP020944 (Pantoea ananatis strain PNA 97-1R plasmid unamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

248. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP014208 (Pantoea ananatis strain R100 plasmid, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

249. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NC_017553 (Pantoea ananatis PA13 plasmid PAGR_p, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

250. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to CP054909 (Pantoea ananatis strain FDAARGOS_680 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

251. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022429 (Pantoea ananatis strain YJ76 plasmid p_unamed1) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

252. spacer 3.64|552605|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP035036 (Pantoea ananatis strain NN08200 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

tgtgatgttgttccgcccaagccgctgcagcc	CRISPR spacer
actaaagttgttctgccccagccgctgcacgg	Protospacer
  *.* *******.**** **********   

253. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP009573 (Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gaatctggctgcggcgcgcgagcggctgacga	Protospacer
 .******** ****** *********   ..

254. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP009155 (Burkholderia pseudomallei strain TSV202 plasmid 1, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gaagttcgctccggcggccgagcgggttcatc	Protospacer
 .* .* ********* ******** ****  

255. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP015032 (Burkholderia cenocepacia strain 842 plasmid pBcn842-1, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gaagtttgctccggcggccgagcgggttcatc	Protospacer
 .* .* ********* ******** ****  

256. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP042167 (Burkholderia contaminans strain ZCC plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gtgccggtttccgtcgctcgagcggcttcaag	Protospacer
  ..* * .**** ***.**************

257. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP028810 (Burkholderia contaminans strain SK875 plasmid p875, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gtgccggtttccgtcgctcgagcggcttcaag	Protospacer
  ..* * .**** ***.**************

258. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP046610 (Burkholderia contaminans strain XL73 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gtgccggtttccgtcgctcgagcggcttcaag	Protospacer
  ..* * .**** ***.**************

259. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NC_008545 (Burkholderia cenocepacia HI2424 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gtgccggtttccgccgctcgagcggcttcaag	Protospacer
  ..* * .**** ***.**************

260. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to MK359359 (Mycobacterium phage Colt, complete genome) position: , mismatch: 9, identity: 0.719

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
tgatctggctccggctcccgaacgaccggctg	Protospacer
.************** *****.**.*.    *

261. spacer 3.72|553093|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP045273 (Bacillus megaterium strain FDU301 plasmid pFDU301A, complete sequence) position: , mismatch: 9, identity: 0.719

cattcaggatatcataaaatccacctatgact	CRISPR spacer
tgtcccaactatcataaaatccatctataact	Protospacer
..*.* .. **************.****.***

262. spacer 3.72|553093|32|NZ_AP019797|CRISPRCasFinder matches to CP000314 (Clostridium perfringens SM101 plasmid pSM101B, complete sequence) position: , mismatch: 9, identity: 0.719

cattcagg-----atatcataaaatccacctatgact	CRISPR spacer
-----agagttatatatcatagaatccatctatgaca	Protospacer
     **.     ********.******.******* 

263. spacer 3.73|553154|32|NZ_AP019797|CRISPRCasFinder matches to KR063281 (Gordonia phage GMA2, complete genome) position: , mismatch: 9, identity: 0.719

taccttcaatcggcacccttcttttggacgcc	CRISPR spacer
taccgtcaatcggcacacttcttgacaagatc	Protospacer
**** *********** ******   .* ..*

264. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP023721 (Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
atatccgagcatgacgagctgctgggcgagtt	Protospacer
 * .. *****.*********** ******. 

265. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP024587 (Roseomonas sp. FDAARGOS_362 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gatgcccggctcgaccagctgctcggcgagcg	Protospacer
  * .  .** **** ****************

266. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to MF324914 (Mycobacterium phage Krueger, complete genome) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
aaggcgtggcacgacgagccgatcggcgagcg	Protospacer
    .* .***********.* **********

267. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_LR134465 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 23, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
tcgttcgagcacgacgaactgctcgacgacgc	Protospacer
*. .* ***********.*******.***   

268. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gtcgcggagcacggcgcgctgctcggcggtgg	Protospacer
 *. .********.** ***********.  *

269. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021802 (Sinorhizobium meliloti strain USDA1021 plasmid psymB, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gacagggaggacgacgagctgatcggcgtccg	Protospacer
  .  **** *********** ******  **

270. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP043441 (Cupriavidus campinensis strain MJ1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gtgttctcgcacgacgtgctgctcggcgcgct	Protospacer
 * .*   ******** *********** ** 

271. spacer 4.33|569252|32|NZ_AP019797|PILER-CR,CRISPRCasFinder matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 9, identity: 0.719

----cgcttcaagcccgacttcgtgggcgacgtgaa	CRISPR spacer
gcggggc----agcccgactacgtgggcggcgtgcg	Protospacer
     **    ********* ********.**** .

272. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP011248 (Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence) position: , mismatch: 9, identity: 0.719

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
tggcgtcactccatcctgctgggcctgttcct	Protospacer
 . **** *.****************  **  

273. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP032919 (Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence) position: , mismatch: 9, identity: 0.719

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
tggcgtcactccatcctgctgggcctgttcct	Protospacer
 . **** *.****************  **  

274. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP033029 (Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence) position: , mismatch: 9, identity: 0.719

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
tggcgtcactccatcctgctgggcctgttcct	Protospacer
 . **** *.****************  **  

275. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP014802 (Salipiger profundus strain JLT2016 plasmid pTPRO6, complete sequence) position: , mismatch: 9, identity: 0.719

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
cagatcacctcgtcgccgatccggatggtgaa	Protospacer
. **** *** ****************..  .

276. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to MN629346 (Aeromonas caviae strain 1507-17068 plasmid p717068-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
tcgatcacctggtcggcgatccgacgctgctt	Protospacer
****** ******** *******.     ** 

277. spacer 4.36|569435|32|NZ_AP019797|CRISPRCasFinder matches to MG198783 (Gordonia phage Mahdia, complete genome) position: , mismatch: 9, identity: 0.719

tgcgctttgacggactcggccacctgcaccag	CRISPR spacer
ccagccttgacggcctcggccacctgggtcat	Protospacer
.  **.******* ************ ..** 

278. spacer 4.39|569618|32|NZ_AP019797|CRISPRCasFinder matches to AP013385 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C16-MedDCM-OCT-S39-C44) position: , mismatch: 9, identity: 0.719

tatgatcgacttatgaaaaagttgaacattcg	CRISPR spacer
gtagatcgacttttgaaaaagatgaaaaattt	Protospacer
   ********* ******** **** * *. 

279. spacer 4.39|569618|32|NZ_AP019797|CRISPRCasFinder matches to AP013398 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-U-MedDCM-OCT-S30-C38) position: , mismatch: 9, identity: 0.719

tatgatcgacttatgaaaaagttgaacattcg	CRISPR spacer
gtagatcgacttttgaaaaagatgaaaaattt	Protospacer
   ********* ******** **** * *. 

280. spacer 4.40|569679|32|NZ_AP019797|CRISPRCasFinder matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tgttgattacgtccgcttcgtaaacatcgcgc	CRISPR spacer
gaccgttcccgttcgcttcgtaaacctcgcgc	Protospacer
 ...* *. ***.************ ******

281. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 9, identity: 0.719

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
caagcccggacggtcgatccgtccgggcttgc	Protospacer
 . .****  ******************.  *

282. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP025617 (Micrococcus luteus strain SGAir0127 plasmid pSGAir0127) position: , mismatch: 9, identity: 0.719

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
tcgaccggctcggtcgatccatccggcacctc	Protospacer
   *** *************.*****  * .*

283. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NC_024972 (Micrococcus sp. A1 plasmid pLMA1, complete sequence) position: , mismatch: 9, identity: 0.719

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
tcgaccggctcggtcgatccatccggcacctc	Protospacer
   *** *************.*****  * .*

284. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NC_023722 (Rhodococcus phage ReqiPine5, complete genome) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
tcctcgatcgcgacggcctcgacggggaacag	Protospacer
**********  ************  * .   

285. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NC_008712 (Paenarthrobacter aurescens TC1 plasmid pTC1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
cagtctgatggcacggcgtcgacgcttcggtc	Protospacer
.  ** . .******** ******** *****

286. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NC_012723 (Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggtacggcttcgacgccactata	Protospacer
  *********.*****.*******..* .* 

287. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to MN657159 (Sphingomonas sp. strain ANT_H46B plasmid pA46BH3, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ctcacgatcggcacggccctgacgctgaccgc	Protospacer
..* **************..*******    *

288. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP009432 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_2, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggtacggcttcgacgccactata	Protospacer
  *********.*****.*******..* .* 

289. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP035903 (Burkholderia glumae strain 257sh-1 plasmid plas2, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggtacggcttcgacgccactata	Protospacer
  *********.*****.*******..* .* 

290. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP014802 (Rhodovulum sulfidophilum plasmid Plasmid2 DNA, complete genome, strain: DSM 2351) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtccttatgggcacggcctcggcgctgcgctg	Protospacer
 .*.. ** ************.******* * 

291. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP052865 (Burkholderia glumae strain HN1 plasmid pBGHN1-1, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggtacggcttcgacgccactata	Protospacer
  *********.*****.*******..* .* 

292. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
cccgtcatctgcacggcctcgacgttgcgcat	Protospacer
.** . *** **************.****  .

293. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP047317 (Burkholderia glumae AU6208 plasmid pwszb, complete sequence) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ggctcgatcggtacggcttcgacgccactata	Protospacer
  *********.*****.*******..* .* 

294. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to MK305891 (Streptomyces phage Gibson, complete genome) position: , mismatch: 9, identity: 0.719

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
tcctcgaccggctcggcctcgactgccggctt	Protospacer
*******.**** **********  .  * *.

295. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 9, identity: 0.719

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
ctggtgacgacgcggcgcaccagcttttccac	Protospacer
.****** ****************..     *

296. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP045217 (Pantoea dispersa strain BJQ0007 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
gtggtgaaggcgcggcgcacctgctgatgcac	Protospacer
 ********.*********** **. * .  *

297. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP049249 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
ctggtgaagccgcggcgctccagctcgtccgc	Protospacer
.******** ******** *****.*.    *

298. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MT639643 (Microbacterium phage FreddieHg, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgtctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

299. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MT818420 (Microbacterium phage Gilda, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

300. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MK737941 (Microbacterium phage Rachella, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

301. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgtctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

302. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MK801732 (Microbacterium phage NarutoRun, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

303. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to NC_047986 (Microbacterium phage Krampus, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

304. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MK801731 (Microbacterium phage Anakin, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

305. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MN497954 (Microbacterium phage Hiddenleaf, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgtctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

306. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MH271292 (Microbacterium phage AnnaSerena, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgcctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

307. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MT684591 (Microbacterium phage Chivey, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgtctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

308. spacer 4.51|570350|32|NZ_AP019797|CRISPRCasFinder matches to MT684592 (Microbacterium phage Aesir, complete genome) position: , mismatch: 9, identity: 0.719

gcgctggacataaaaaacggaacgctggacgt	CRISPR spacer
cgtctggacatcaacaacggaacgcttcagga	Protospacer
   ******** ** ***********  * * 

309. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP018080 (Sulfitobacter sp. AM1-D1 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ccgcatcaggtcgcgcatttcctcgatcccgt	Protospacer
*.***.*************** *** .  .*.

310. spacer 4.55|570594|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP017591 (Pantoea stewartii subsp. stewartii DC283 plasmid pDSJ10, complete sequence) position: , mismatch: 9, identity: 0.719

cttccggaaggttgaacagcagaacgcgcgcc	CRISPR spacer
ggccaggaaggttgaaaagcaaaacgcgatac	Protospacer
  .* *********** ****.******   *

311. spacer 4.55|570594|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP049116 (Pantoea stewartii strain ZJ-FGZX1 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cttccggaaggttgaacagcagaacgcgcgcc	CRISPR spacer
ggccaggaaggttgaaaagcaaaacgcgatac	Protospacer
  .* *********** ****.******   *

312. spacer 4.65|569739|33|NZ_AP019797|PILER-CR matches to NZ_CP042825 (Rhizobium sp. WL3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.727

cagcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
gccgatcaactcggtcgagccggccgggccgcc	Protospacer
    *.* .********* *** **********

313. spacer 4.68|569922|33|NZ_AP019797|PILER-CR matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 9, identity: 0.727

ttcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
ctcctcgatcgcctcggcctcgacgcgactccg	Protospacer
.********** * ************ .*  . 

314. spacer 6.5|1674646|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021028 (Rhizobium sp. TAL182 plasmid pRetTAL182d, complete sequence) position: , mismatch: 9, identity: 0.75

tcgcgtcggtgccgatgcgccgagcgccgaggtgcc	CRISPR spacer
ccgccggcctgccgatgcgccgatcaccgaggtgct	Protospacer
.***     ************** *.*********.

315. spacer 6.5|1674646|36|NZ_AP019797|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 9, identity: 0.75

tcgcgtcggtgccgatgcgccgagcgccgaggtgcc----	CRISPR spacer
cggcggcggcgccgatgcgccgagcgcc----cgccgcag	Protospacer
. *** ***.******************    .***    

316. spacer 10.16|1725204|38|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to MN234226 (Mycobacterium phage Curiosium, complete genome) position: , mismatch: 9, identity: 0.763

ggcacaggtgatcggcagcgtggagcgcattaacctgc	CRISPR spacer
cggcccgctgatcggcagcgtcgagcgcatcaaccacc	Protospacer
 *  * * ************* ********.****  *

317. spacer 12.27|2074700|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016617 (Microvirga ossetica strain V5/3m plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.75

cgaccgacgcgcttgtcgagcagcttcagcgccacc	CRISPR spacer
gatcggacgcgcttgtcgagcagctccatcgcgata	Protospacer
 . * ********************.** *** *. 

318. spacer 3.11|551628|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

caaagccactggctcgctctgggtgacgatcca	CRISPR spacer
ccggaggtctggctcgccctgggtgccgatccc	Protospacer
* ...   *********.******* ****** 

319. spacer 3.14|551811|33|NZ_AP019797|PILER-CR,CRT matches to KF024727 (Mycobacterium phage Reprobate, complete genome) position: , mismatch: 10, identity: 0.697

ccgccgtctcaccggcgacgatgcgccgggccg	CRISPR spacer
tggtgtggtctccggcggcgatgcgccgggcca	Protospacer
. *.    ** ******.**************.

320. spacer 3.15|551872|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ccggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
agcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
   .************* *.******** *  .

321. spacer 3.15|551872|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 10, identity: 0.697

ccggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
agcacggcgcgggtgatacgctgctcccgctcg	Protospacer
   .************* *.******** *  .

322. spacer 3.15|551872|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 10, identity: 0.697

ccggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
agcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
   .************* *.******** *  .

323. spacer 3.15|551872|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.697

ccggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
agcacggcgcgggtgatgcgctgctcccgctcg	Protospacer
   .************* *.******** *  .

324. spacer 3.31|552848|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP009573 (Sphingomonas taxi strain ATCC 55669 plasmid STP2, complete sequence) position: , mismatch: 10, identity: 0.697

ccgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
agaatctggctgcggcgcgcgagcggctgacga	Protospacer
  .******** ****** *********   ..

325. spacer 3.37|553214|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP023721 (Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.697

ctttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gatatccgagcatgacgagctgctgggcgagtt	Protospacer
  * .. *****.*********** ******. 

326. spacer 3.47|551568|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP017077 (Novosphingobium resinovorum strain SA1 plasmid pSA2, complete sequence) position: , mismatch: 10, identity: 0.688

ggcacggagatcacgcagacgtccaccaagct	CRISPR spacer
ggcacgccgatcacgcagacgtcggagacttc	Protospacer
******  *************** .  *  ..

327. spacer 3.48|551629|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

aaagccactggctcgctctgggtgacgatcca	CRISPR spacer
cggaggtctggctcgccctgggtgccgatccc	Protospacer
 ...   *********.******* ****** 

328. spacer 3.52|551873|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP020716 (Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

cggcggcgcgggtgatccactgctcccccgga	CRISPR spacer
ccagggcgcgggtgatccacagcccccagtcg	Protospacer
* . **************** **.***    .

329. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

330. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

331. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

332. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

333. spacer 3.58|552239|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

334. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

335. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021827 (Sinorhizobium meliloti strain KH35c plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

336. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021830 (Sinorhizobium meliloti strain HM006 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

337. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

338. spacer 3.66|552727|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP021805 (Sinorhizobium meliloti strain T073 plasmid psymA, complete sequence) position: , mismatch: 10, identity: 0.688

aaaacggaggcggaaccgtgaaggtcgtagca	CRISPR spacer
ctgtcggaggcggaaccgtaaaggacgccata	Protospacer
  . ***************.**** **. ..*

339. spacer 3.70|552971|32|NZ_AP019797|CRISPRCasFinder matches to NC_010381 (Lysinibacillus sphaericus C3-41 plasmid pBsph, complete sequence) position: , mismatch: 10, identity: 0.688

cagagccatcttcgcctactgttttgttggtg	CRISPR spacer
gaacagcatcttcgcctgctgttttgatgact	Protospacer
 *. . ***********.******** **.. 

340. spacer 3.72|553093|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP048111 (Klebsiella michiganensis strain BD177 plasmid unnamed3) position: , mismatch: 10, identity: 0.688

cattcaggatatcataaaatccacctatgact	CRISPR spacer
agggcagtatatcataaaatccaactattcag	Protospacer
 .  *** *************** ****    

341. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP040821 (Paraoceanicella profunda strain D4M1 plasmid pD4M1C, complete sequence) position: , mismatch: 10, identity: 0.688

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
atggcccggcacgacgagctgcgcggccagcc	Protospacer
 *  .  .************** **** *** 

342. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to CP054921 (Streptomyces sp. NA03103 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
tgcggcgagcgcgacgagcttctcggcgaagt	Protospacer
* .   ****.********* ********.  

343. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NC_023284 (Streptomyces sp. F2 plasmid pFRL4, complete sequence) position: , mismatch: 10, identity: 0.688

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gctctggagctcgccgagctgctcgatggagt	Protospacer
 .******** ** ***********..*..  

344. spacer 4.33|569252|32|NZ_AP019797|PILER-CR,CRISPRCasFinder matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 10, identity: 0.688

cgcttcaagcccgacttcgtgggcgacgtgaa	CRISPR spacer
gccgggcagcccgactacgtgggcggcgtgcg	Protospacer
  *    ********* ********.**** .

345. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
caccgtcaccccgtcctgctgggcggaggacg	Protospacer
 ****** ****.***********   *   .

346. spacer 4.34|569313|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gaccgtctccccatcctgctgggccttgtcga	CRISPR spacer
ctgggcacccgcatcctgctgggcctcgtcgc	Protospacer
    *. .** ***************.**** 

347. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
acccgctcctggtcgccgatctgggtgatgac	Protospacer
 *   ****************.**.***.   

348. spacer 4.35|569374|32|NZ_AP019797|CRISPRCasFinder matches to MN585972 (Arthrobacter phage Edmundo, complete genome) position: , mismatch: 10, identity: 0.688

tcgatctcctggtcgccgatccggatgacctg	CRISPR spacer
aagccaagctggtcgccgttctggatgacctt	Protospacer
  * .   ********** **.********* 

349. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to NC_041879 (Bacillus phage Mgbh1, complete genome) position: , mismatch: 10, identity: 0.688

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
gtcacacgctcggttgatccgtccgcataccg	Protospacer
. *** ********.********** ..  * 

350. spacer 4.41|569740|32|NZ_AP019797|CRISPRCasFinder matches to KT381864 (Thiobacimonas phage vB_ThpS-P1, complete genome) position: , mismatch: 10, identity: 0.688

agcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
ctgacccgctcggtcgatgcggccggcgaacg	Protospacer
   *************** ** ****   .* 

351. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP022417 (Sulfitobacter pseudonitzschiae strain SMR1 plasmid pSMR1-2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
atgacgatgggcacggcctcgacgatgaccgc	Protospacer
 .  **** *************** **    *

352. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP015420 (Rhodovulum sulfidophilum DSM 1374 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtgacgatcggcaccggctcgacgctggagct	Protospacer
 .  ********** * ********** .*..

353. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP014801 (Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351) position: , mismatch: 10, identity: 0.688

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtgacgatcggcaccggctcgacgctggagct	Protospacer
 .  ********** * ********** .*..

354. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP030129 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
gcacaccagactcggcgcaccagcacaaagca	Protospacer
 ..    **** ************ ****** 

355. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP029833 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
ctggtgacgatgcggcgcaccagcttctccac	Protospacer
.****** **.*************..     *

356. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NC_013858 (Azospirillum sp. B510 plasmid pAB510d, complete sequence) position: , mismatch: 10, identity: 0.688

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
ctggtgacgacgcggcgcgccagcttcgccac	Protospacer
.****** **********.*****.. .   *

357. spacer 4.49|570228|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

ttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
ctggtgacaacgcggcgcaccagcttctccac	Protospacer
.****** .***************..     *

358. spacer 4.53|570472|32|NZ_AP019797|CRISPRCasFinder matches to MF417880 (Uncultured Caudovirales phage clone 9F_5, partial genome) position: , mismatch: 10, identity: 0.688

ctgcaccaggtcgcgcatttcatcgtcgatgc	CRISPR spacer
ggcctccagttcgcgcagttcatcgtcgggca	Protospacer
   * **** ******* **********.   

359. spacer 4.54|570533|32|NZ_AP019797|CRISPRCasFinder matches to MK388689 (Pantoea phage vB_PagM_LIET2, complete genome) position: , mismatch: 10, identity: 0.688

acgaagtcatcaggcaccaccggcacccggtt	CRISPR spacer
ggagtatcagcaggcaacaccggcacccgttg	Protospacer
. .. .*** ****** ************ * 

360. spacer 4.65|569739|33|NZ_AP019797|PILER-CR matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 10, identity: 0.697

cagcacccgctcggtcgatccgtccgggccgcc	CRISPR spacer
tcaagcccggacggtcgatccgtccgggcttgc	Protospacer
. . .****  ******************.  *

361. spacer 4.68|569922|33|NZ_AP019797|PILER-CR matches to NC_023722 (Rhodococcus phage ReqiPine5, complete genome) position: , mismatch: 10, identity: 0.697

ttcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtcctcgatcgcgacggcctcgacggggaacag	Protospacer
 **********  ************  * .   

362. spacer 4.73|570227|33|NZ_AP019797|PILER-CR matches to NZ_CP030129 (Indioceanicola profundi strain SCSIO 08040 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.697

cttggtgaagacgcggcgcaccagcccaaagcc	CRISPR spacer
cgcacaccagactcggcgcaccagcacaaagca	Protospacer
* ..    **** ************ ****** 

363. spacer 12.58|2076771|37|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015740 (Shinella sp. HZN7 plasmid pShin-04, complete sequence) position: , mismatch: 10, identity: 0.73

ttcgatgagcacgccgccgaaatcgaa-cttgcggtga	CRISPR spacer
gtcgatcagcacgccgccgatatcgaagaccacaatg-	Protospacer
 ***** ************* ******  ...*..** 

364. spacer 3.35|553092|33|NZ_AP019797|PILER-CR,CRT matches to NZ_CP048111 (Klebsiella michiganensis strain BD177 plasmid unnamed3) position: , mismatch: 11, identity: 0.667

tcattcaggatatcataaaatccacctatgact	CRISPR spacer
aagggcagtatatcataaaatccaactattcag	Protospacer
  .  *** *************** ****    

365. spacer 3.42|551263|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP025614 (Niveispirillum cyanobacteriorum strain TH16 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

tgctcggccggatgcggaacgacaacgggcgg	CRISPR spacer
gcagaggccggatgcggaaagacagcggagtt	Protospacer
     ************** ****.***.   

366. spacer 3.68|552849|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP029832 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

cgatctggctccggcgcccgagcggcttcaag	CRISPR spacer
gctgctggctccggcggccgaccggctgggca	Protospacer
    ************ **** *****  . .

367. spacer 3.74|553215|32|NZ_AP019797|CRISPRCasFinder matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 11, identity: 0.656

tttctggagcacgacgagctgctcggcgagcg	CRISPR spacer
gccgtgcagcacgacgagctgcgcggcctcgt	Protospacer
 .. ** *************** ****     

368. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP014801 (Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351) position: , mismatch: 11, identity: 0.656

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtgacgatcggcaccggctcgacgctggaact	Protospacer
 .  ********** * ********** ....

369. spacer 4.44|569923|32|NZ_AP019797|CRISPRCasFinder matches to NZ_AP014801 (Rhodovulum sulfidophilum plasmid Plasmid1 DNA, complete genome, strain: DSM 2351) position: , mismatch: 11, identity: 0.656

tcctcgatcggcacggcctcgacgctgcggtc	CRISPR spacer
gtgacgatcggcaccggctcgacgctggaact	Protospacer
 .  ********** * ********** ....

370. spacer 12.47|2076035|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NC_020062 (Rhizobium tropici CIAT 899 plasmid pRtrCIAT899c, complete sequence) position: , mismatch: 11, identity: 0.694

acacgacggtgcggcttgccgcgcgcgcctgctgca	CRISPR spacer
aagttgcggggcggcttgccgcgagcgcctgccttg	Protospacer
* .. .*** ************* ********. ..

371. spacer 12.52|2076367|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010682 (Phaeobacter piscinae strain P14 plasmid pP14_a, complete sequence) position: , mismatch: 12, identity: 0.667

gccgcccgcgcggcatctcgtggtggattttgaatc	CRISPR spacer
catattggcgcggcatctcgtcatggattttgacat	Protospacer
  .... ************** .**********  .

372. spacer 12.52|2076367|36|NZ_AP019797|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010644 (Phaeobacter piscinae strain P36 plasmid pP36_a, complete sequence) position: , mismatch: 12, identity: 0.667

gccgcccgcgcggcatctcgtggtggattttgaatc	CRISPR spacer
catattggcgcggcatctcgtcatggattttgacat	Protospacer
  .... ************** .**********  .