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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_AP022332 Methylosinus sp. C49 isolate Methylosinus sp. C49 3 crisprs DEDDh,cas3,RT,WYL,csa3 1 2 3 0
NZ_AP022336 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49d, complete sequence 0 crisprs NA 0 0 1 0
NZ_AP022334 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49b, complete sequence 0 crisprs NA 0 0 1 0
NZ_AP022333 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49a, complete sequence 0 crisprs csa3,cas3 0 0 0 0
NZ_AP022335 Methylosinus sp. C49 isolate Methylosinus sp. C49 plasmid pMSC49c, complete sequence 0 crisprs NA 0 0 1 0

Results visualization

1. NZ_AP022332
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022332_1 516904-517004 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022332_3 3284192-3284358 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_AP022332_2 3283625-3283960 Orphan NA
5 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3284941-3284989 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3285268-3285316 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3285595-3285643 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3285922-3285970 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3286249-3286297 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3286576-3286624 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3287230-3287278 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3287557-3287605 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3287884-3287932 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3288211-3288259 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3288538-3288586 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3288865-3288913 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3289192-3289240 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3289519-3289567 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3289846-3289894 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3290173-3290221 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3290500-3290548 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3290827-3290875 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3291154-3291202 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3291481-3291529 0 1.0
NZ_AP022332_3 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder 3284287-3284335 49 NZ_AP022332.1 3284614-3284662 1 0.98

1. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3284941-3284989, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

2. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3285268-3285316, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

3. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3285595-3285643, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

4. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3285922-3285970, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

5. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3286249-3286297, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

6. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3286576-3286624, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

7. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3287230-3287278, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

8. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3287557-3287605, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

9. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3287884-3287932, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

10. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3288211-3288259, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

11. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3288538-3288586, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

12. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3288865-3288913, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

13. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3289192-3289240, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

14. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3289519-3289567, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

15. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3289846-3289894, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

16. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3290173-3290221, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

17. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3290500-3290548, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

18. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3290827-3290875, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

19. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3291154-3291202, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

20. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3291481-3291529, mismatch: 0, identity: 1.0

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	Protospacer
*************************************************

21. spacer 3.2|3284287|49|NZ_AP022332|CRISPRCasFinder matches to position: 3284614-3284662, mismatch: 1, identity: 0.98

gcagatcggcaagctcaccaccaccgcgatctcgaacctctccaccacc	CRISPR spacer
gcagatcggcaagctcaccaccaccgcgatctccaacctctccaccacc	Protospacer
********************************* ***************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 MN586020 Microbacterium phage Megan, complete genome 4069-4093 2 0.92
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 KU998238 Gordonia phage Splinter, complete genome 24827-24851 2 0.92
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NC_030911 Gordonia phage Vendetta, complete genome 24827-24851 2 0.92
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP011044 Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence 5329-5353 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP021035 Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence 5329-5353 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP021039 Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence 5329-5353 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP012917 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence 627479-627503 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NC_012586 Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence 1544155-1544179 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP032343 Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence 101110-101134 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_KY000069 Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence 13620-13644 3 0.88
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP017943 Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence 173273-173297 3 0.88
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP022363 Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence 693252-693276 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP024895 Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence 260861-260885 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NC_013531 Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence 680-704 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP006368 Aureimonas sp. AU20 plasmid pAU20a, complete sequence 39759-39783 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP037914 Sphingomonas sp. AAP5 plasmid p213, complete sequence 167103-167127 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP032347 Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence 156739-156763 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP024308 Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence 241034-241058 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 MN234192 Streptomyces phage Animus, complete genome 30950-30974 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 MF766047 Streptomyces phage SqueakyClean, complete genome 30882-30906 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 MK392366 Streptomyces phage Janus, complete genome 30791-30815 4 0.84
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP015063 Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence 19732-19756 4 0.84
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NC_014918 Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence 5978-6002 4 0.84
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NC_008269 Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence 432274-432298 4 0.84
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP015322 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence 58288-58312 4 0.84
NZ_AP022332_2 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder 3283792-3283816 25 NZ_CP039340 Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence 1228950-1228974 5 0.8
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NC_014718 Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence 209525-209549 5 0.8
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP009112 Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence 728181-728205 5 0.8
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP029452 Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence 786266-786290 5 0.8
NZ_AP022332_2 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder 3283840-3283864 25 NZ_CP023071 Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence 745313-745337 5 0.8

1. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to MN586020 (Microbacterium phage Megan, complete genome) position: , mismatch: 2, identity: 0.92

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgtcggcctcgcgctcgcg	Protospacer
********.******* ********

2. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to KU998238 (Gordonia phage Splinter, complete genome) position: , mismatch: 2, identity: 0.92

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcctgtggctcgcg	Protospacer
*************** * *******

3. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NC_030911 (Gordonia phage Vendetta, complete genome) position: , mismatch: 2, identity: 0.92

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcctgtggctcgcg	Protospacer
*************** * *******

4. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP011044 (Clavibacter michiganensis subsp. insidiosus strain R1-1 plasmid pCI1, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gggcatcgccggccactcgctcgcg	Protospacer
 * *********** **********

5. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP021035 (Clavibacter michiganensis subsp. insidiosus strain R1-3 plasmid pCI1, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gggcatcgccggccactcgctcgcg	Protospacer
 * *********** **********

6. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP021039 (Clavibacter michiganensis subsp. insidiosus strain ATCC 10253 plasmid pCI1, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gggcatcgccggccactcgctcgcg	Protospacer
 * *********** **********

7. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccgggctgtcgctcgcc	Protospacer
************ ** ******** 

8. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cggcatcgccggcctctcgatcgcc	Protospacer
** **************** **** 

9. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccgggctgtcgctcgcc	Protospacer
************ ** ******** 

10. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_KY000069 (Agrobacterium deltaense strain Tun176 plasmid pTi_Tun176, complete sequence) position: , mismatch: 3, identity: 0.88

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcatctcggtcgtg	Protospacer
************* ***** ***.*

11. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.88

gcaggcggacgaattcaccgccact	CRISPR spacer
gcaggaggacgaattcatcgccacc	Protospacer
***** ***********.******.

12. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP022363 (Azospirillum sp. TSH58 plasmid TSH58_p03, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcatcccgctcgac	Protospacer
************* **.******  

13. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP024895 (Amycolatopsis sp. AA4 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccctcgccggcctcgcgctcggc	Protospacer
**** *********** ******  

14. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NC_013531 (Xylanimonas cellulosilytica DSM 15894 plasmid pXCEL01, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
ggccaccgccgccctctcgctcgca	Protospacer
 ****.***** ************.

15. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcctgacgctcggt	Protospacer
***************  ******  

16. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP037914 (Sphingomonas sp. AAP5 plasmid p213, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccaacgccggcctgtcgctcggt	Protospacer
***** ********* *******  

17. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccatcgccggcatcccgctcgac	Protospacer
************* **.******  

18. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP024308 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3a, complete sequence) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
cgccgtcgacggcctctcgctcgaa	Protospacer
****.*** ************** .

19. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to MN234192 (Streptomyces phage Animus, complete genome) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gtcgatcgccggcctctcgcttgcg	Protospacer
  * *****************.***

20. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to MF766047 (Streptomyces phage SqueakyClean, complete genome) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gtcgatcgccggcctctcgcttgcg	Protospacer
  * *****************.***

21. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to MK392366 (Streptomyces phage Janus, complete genome) position: , mismatch: 4, identity: 0.84

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gtcgatcgccggcctctcgcttgcg	Protospacer
  * *****************.***

22. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 4, identity: 0.84

gcaggcggacgaattcaccgccact	CRISPR spacer
cgaggcggacgaatacaccgccacc	Protospacer
  ************ *********.

23. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NC_014918 (Mesorhizobium ciceri biovar biserrulae WSM1271 plasmid pMESCI01, complete sequence) position: , mismatch: 4, identity: 0.84

gcaggcggacgaattcaccgccact	CRISPR spacer
cgaggcggacgaatacaccgccacc	Protospacer
  ************ *********.

24. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NC_008269 (Rhodococcus jostii RHA1 plasmid pRHL1, complete sequence) position: , mismatch: 4, identity: 0.84

gcaggcggacgaattcaccgccact	CRISPR spacer
gcaggcggacgaattcacctgtacc	Protospacer
*******************  .**.

25. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP015322 (Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence) position: , mismatch: 4, identity: 0.84

gcaggcggacgaattcaccgccact	CRISPR spacer
cgagtcggacgaatacaccgccact	Protospacer
  ** ********* **********

26. spacer 2.3|3283792|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 5, identity: 0.8

cgccatcgccggcctctcgctcgcg	CRISPR spacer
gcagatcgccggcgtctcgctcgcg	Protospacer
    ********* ***********

27. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NC_014718 (Paraburkholderia rhizoxinica HKI 454 plasmid pBRH01, complete sequence) position: , mismatch: 5, identity: 0.8

gcaggcggacgaattcaccgccact	CRISPR spacer
ctaggcggacgaattcaccgcggcc	Protospacer
 .******************* .*.

28. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 5, identity: 0.8

gcaggcggacgaattcaccgccact	CRISPR spacer
gcaggcggacgaattcacctgttat	Protospacer
*******************  .  *

29. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP029452 (Sinorhizobium fredii CCBAU 25509 plasmid pSF25509b, complete sequence) position: , mismatch: 5, identity: 0.8

gcaggcggacgaattcaccgccact	CRISPR spacer
cgaggcggacgaattcaccgcggcc	Protospacer
  ******************* .*.

30. spacer 2.4|3283840|25|NZ_AP022332|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 5, identity: 0.8

gcaggcggacgaattcaccgccact	CRISPR spacer
cgaggcggacgaattcaccgcggcc	Protospacer
  ******************* .*.

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1414863 : 1430687 21 Paracoccus_phage(27.27%) head,portal,capsid,protease,tail NA
DBSCAN-SWA_2 2577827 : 2586243 7 Pseudomonas_phage(33.33%) tRNA NA
DBSCAN-SWA_3 2683766 : 2693059 10 uncultured_Mediterranean_phage(87.5%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_AP022335
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 49634 : 100557 44 uncultured_Caudovirales_phage(28.57%) integrase,transposase attL 78410:78427|attR 100416:100433
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_AP022336
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 472 : 9507 11 Brucella_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_AP022334
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 111055 : 220148 78 Escherichia_phage(22.22%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage