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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP048058 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048059 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p3, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048056 Piscirickettsia salmonis strain Ps-8942B chromosome, complete genome 2 crisprs DEDDh,cas3,csa3 0 0 33 0
NZ_CP048065 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p9, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048064 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p8, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048060 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p4, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP048057 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP048063 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p7, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP048061 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p5, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP048062 Piscirickettsia salmonis strain Ps-8942B plasmid Ps8942B-p6, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP048060
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1798 : 118632 108 Streptococcus_phage(34.78%) portal,integrase,terminase,transposase attL 19184:19243|attR 88719:89008
DBSCAN-SWA_2 128130 : 192204 63 Streptococcus_phage(45.16%) portal,integrase,transposase attL 156028:156087|attR 196540:197460

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP048063
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5307 : 14220 15 Staphylococcus_phage(25.0%) transposase NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP048056
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048056_1 1097988-1098083 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP048056_2 1604489-1604599 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3375 : 56485 55 Escherichia_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_2 185868 : 322729 120 Acinetobacter_phage(11.76%) transposase,protease,tail,tRNA NA
DBSCAN-SWA_3 330695 : 384107 50 Staphylococcus_phage(57.14%) transposase NA
DBSCAN-SWA_4 441094 : 563492 109 Staphylococcus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_5 571701 : 678815 110 Acinetobacter_phage(16.67%) transposase,protease,tRNA NA
DBSCAN-SWA_6 686170 : 750177 52 Staphylococcus_phage(37.5%) transposase,tRNA NA
DBSCAN-SWA_7 753987 : 893076 115 Staphylococcus_phage(15.38%) transposase,integrase attL 870831:870890|attR 886986:887482
DBSCAN-SWA_8 902562 : 1038307 111 Staphylococcus_phage(21.74%) transposase,tRNA,protease NA
DBSCAN-SWA_9 1043876 : 1102634 55 unidentified_phage(18.18%) transposase,tRNA NA
DBSCAN-SWA_10 1110932 : 1152991 37 Acinetobacter_phage(33.33%) transposase,protease NA
DBSCAN-SWA_11 1193178 : 1247566 44 uncultured_Mediterranean_phage(28.57%) transposase,tRNA NA
DBSCAN-SWA_12 1265068 : 1305750 36 Staphylococcus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_13 1320994 : 1384672 52 Acinetobacter_phage(22.22%) transposase NA
DBSCAN-SWA_14 1414427 : 1454363 34 Staphylococcus_phage(50.0%) transposase,plate NA
DBSCAN-SWA_15 1460136 : 1586058 103 Acinetobacter_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_16 1608418 : 1650711 44 Staphylococcus_phage(30.0%) transposase,protease,integrase attL 1629757:1629816|attR 1640217:1640507
DBSCAN-SWA_17 1660704 : 1692235 31 Staphylococcus_phage(22.22%) transposase NA
DBSCAN-SWA_18 1750566 : 1783040 31 Staphylococcus_phage(12.5%) transposase,tRNA NA
DBSCAN-SWA_19 1786565 : 1902060 101 Acinetobacter_phage(14.81%) transposase,tRNA,protease NA
DBSCAN-SWA_20 1988783 : 2055249 57 Staphylococcus_phage(20.0%) transposase NA
DBSCAN-SWA_21 2079969 : 2141157 49 Acinetobacter_phage(27.27%) transposase NA
DBSCAN-SWA_22 2146869 : 2207259 52 Staphylococcus_phage(30.0%) transposase NA
DBSCAN-SWA_23 2228000 : 2278121 43 Vibriophage(14.29%) transposase,protease,tRNA NA
DBSCAN-SWA_24 2281841 : 2288512 7 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_25 2367090 : 2413797 41 Synechococcus_phage(20.0%) transposase,tRNA NA
DBSCAN-SWA_26 2419492 : 2455769 36 Acinetobacter_phage(25.0%) transposase,protease NA
DBSCAN-SWA_27 2500913 : 2566522 57 Staphylococcus_phage(18.18%) transposase,plate,tRNA NA
DBSCAN-SWA_28 2570523 : 2634291 55 Planktothrix_phage(10.0%) transposase NA
DBSCAN-SWA_29 2666078 : 2691200 23 Staphylococcus_phage(33.33%) transposase NA
DBSCAN-SWA_30 2708426 : 2758349 46 Escherichia_phage(16.67%) transposase NA
DBSCAN-SWA_31 2795375 : 2866490 79 Staphylococcus_phage(25.0%) transposase,tRNA,protease NA
DBSCAN-SWA_32 2950148 : 3060985 101 Staphylococcus_phage(14.29%) transposase,tRNA,protease NA
DBSCAN-SWA_33 3093979 : 3155137 56 Acinetobacter_phage(33.33%) transposase,tRNA NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP048061
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 5134 : 54525 57 unidentified_phage(39.29%) tail,capsid,transposase,head,integrase,terminase attL 27411:27470|attR 62089:63202
DBSCAN-SWA_2 80304 : 94100 18 Moraxella_phage(18.18%) transposase,tail,capsid,head NA

Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage