CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048209	Paenibacillus sp. 12200R-189 chromosome, complete genome	26 crisprs	WYL,cas3,DEDDh,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5	5	24	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048209_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_1

131348-132181

Orphan

Consensus_repeat	Method
TCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	CRT

12 spacers

The CRISPR arrays of NZ_CP048209_1

>merge|NZ_CP048209|1|131348-132181|CRT
TCTTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAATTGGTTCGTATTAAATGCAGCACGTCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAATTGGTTCGTAGCAAATGTACCTTCTTCTATGCTCGTTACATTGTTCGAGATCGTCACACTCGTTAATTGGTTAGTAGCAAATGCATAAGCTCCTATACTTGTTACACTGTTCGGGATCGTCACACTCGTTAAGCTGTTATGATAAAATGCATAAGCTCCTATACTCGTTACACTGTTCGGGATCGTCACACTCGTTAATGGGTTAGAATCAAATGCATGATCTCCTATGCTCGTTACACCGTTCGAGATCGTCACACTCGTTAAGCTGTCCTGATAAAATGCATAAACTCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAATGGGTTACCAGCAAATGCATAAACTCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAAGCTGTTGGAATAAAATACATAATCCCCTATGCTCGTTACACTGCTCGGGATTGTCGCACTCGTTAAGTGGTTAGCAGCAAATGCAGAAGACCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAAGCTGTTAGCAGAAAATGCAGAAGACCCTATGCTCATTACACTGTTCGGGATCGTCACACTCGTTAAGCTGTTATGATAAAATGAAGATTTTCCTATGCTCGTTACACTATTCGGGATCGTCACACTCGTTAAGCCGTTATAATAAAATGCTTCATCTCCTATGCTCGTTACACTGTTCGGGATCGTTACACTCGTTAA

>NZ_CP048209|1|1|131348-132181|CRT
TCTTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	TTGGTTCGTATTAAATGCAGCACG
TCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	TTGGTTCGTAGCAAATGTACCTTC
TTCTATGCTCGTTACATTGTTCGAGATCGTCACACTCGTTAA	TTGGTTAGTAGCAAATGCATAAGC
TCCTATACTTGTTACACTGTTCGGGATCGTCACACTCGTTAA	GCTGTTATGATAAAATGCATAAGC
TCCTATACTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	TGGGTTAGAATCAAATGCATGATC
TCCTATGCTCGTTACACCGTTCGAGATCGTCACACTCGTTAA	GCTGTCCTGATAAAATGCATAAAC
TCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	TGGGTTACCAGCAAATGCATAAAC
TCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	GCTGTTGGAATAAAATACATAATC
CCCTATGCTCGTTACACTGCTCGGGATTGTCGCACTCGTTAA	GTGGTTAGCAGCAAATGCAGAAGA
CCCTATGCTCGTTACACTGTTCGGGATCGTCACACTCGTTAA	GCTGTTAGCAGAAAATGCAGAAGA
CCCTATGCTCATTACACTGTTCGGGATCGTCACACTCGTTAA	GCTGTTATGATAAAATGAAGATTT
TCCTATGCTCGTTACACTATTCGGGATCGTCACACTCGTTAA	GCCGTTATAATAAAATGCTTCATC
TCCTATGCTCGTTACACTGTTCGGGATCGTTACACTCGTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162354688.1\|123330_127242_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP048209.1\|WP_162354694.1\|139491_139683_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162354683.1\|117984_118755_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162354691.1\|133815_134766_+\|ketopantoate-reductase	unknown	unknown	gnl\|CDD\|224805
NZ_CP048209.1\|WP_162354687.1\|123063_123204_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271323
NZ_CP048209.1\|WP_162354695.1\|139688_140045_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162354692.1\|135071_135335_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162354679.1\|105703_106945_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP048209.1\|WP_162354690.1\|133065_133650_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP048209.1\|WP_162354680.1\|107029_113761_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378188
NZ_CP048209.1\|WP_162354697.1\|141370_142414_+\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|214861
NZ_CP048209.1\|WP_162354686.1\|122429_122813_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162354698.1\|142475_143759_+\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP048209.1\|WP_162360238.1\|135336_136350_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341135
NZ_CP048209.1\|WP_162354681.1\|113928_117006_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225461
NZ_CP048209.1\|WP_162354685.1\|120699_122235_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|99707
NZ_CP048209.1\|WP_162354684.1\|118914_120132_-\|Abi-family-protein	unknown	unknown	gnl\|CDD\|377910
NZ_CP048209.1\|WP_162354693.1\|136802_138617_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|280533
NZ_CP048209.1\|WP_162354696.1\|140876_141362_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048209.1\|WP_162354682.1\|117542_117998_+\|TFIIB-type-zinc-ribbon-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162354688.1\|123330_127242_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	1.04877e-27
NZ_CP048209.1\|WP_162354697.1\|141370_142414_+\|recombinase-family-protein	gnl\|CDD\|214861	smart00857, Resolvase, Resolvase, N terminal domain. The N-terminal domain of the resolvase family contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase.	1.37916e-54
NZ_CP048209.1\|WP_162354685.1\|120699_122235_-\|ATP-binding-protein	gnl\|CDD\|99707	cd00009, AAA, The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.	3.01288e-05
NZ_CP048209.1\|WP_162354691.1\|133815_134766_+\|ketopantoate-reductase	gnl\|CDD\|224805	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism].	5.15769e-15
NZ_CP048209.1\|WP_162354687.1\|123063_123204_-\|hypothetical-protein	gnl\|CDD\|271323	cd14953, NHL_like_1, Uncharacterized NHL-repeat domain in bacterial proteins. This bacterial family of NHL-repeat domains is found in a variety of domain architectures. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	7.22518e-11
NZ_CP048209.1\|WP_162354679.1\|105703_106945_-\|hypothetical-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.73071e-27
NZ_CP048209.1\|WP_162354696.1\|140876_141362_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.20175e-06
NZ_CP048209.1\|WP_162354693.1\|136802_138617_-\|N-6-DNA-methylase	gnl\|CDD\|280533	pfam02384, N6_Mtase, N-6 DNA Methylase. Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The R-M system is a complex containing three polypeptides: M (this family), S (pfam01420), and R. This family consists of N-6 adenine-specific DNA methylase EC:2.1.1.72 from Type I and Type IC restriction systems. These methylases have the same sequence specificity as their corresponding restriction enzymes.	4.20164e-24
NZ_CP048209.1\|WP_162354690.1\|133065_133650_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.75347e-16
NZ_CP048209.1\|WP_162354698.1\|142475_143759_+\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	3.23799e-27
NZ_CP048209.1\|WP_162360238.1\|135336_136350_-\|hypothetical-protein	gnl\|CDD\|341135	cd17246, RMtype1_S_SonII-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to Shewanella oneidensis MR-1 S subunit (S.SonII) TRD2-CR2. This model contains Shewanella oneidensis MR-1 S subunit (S.SonII) TRD2-CR2 and similar TRD-CR's. S.SonII recognizes 5'... GTCANNNNNNRTCA ... 3'. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases. S.SonII TRD1-CR1 does not belong to this subfamily.	2.03542e-09
NZ_CP048209.1\|WP_162354681.1\|113928_117006_-\|hypothetical-protein	gnl\|CDD\|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	5.40674e-89
NZ_CP048209.1\|WP_162354684.1\|118914_120132_-\|Abi-family-protein	gnl\|CDD\|377910	pfam07751, Abi_2, Abi-like protein. This family, found in various bacterial species, contains sequences that are similar to the Abi group of proteins, which are involved in bacteriophage resistance mediated by abortive infection in Lactococcus species. The proteins are thought to have helix-turn-helix motifs, found in many DNA-binding proteins, allowing them to perform their function.	6.84884e-10
NZ_CP048209.1\|WP_162354680.1\|107029_113761_-\|hypothetical-protein	gnl\|CDD\|378188	pfam09479, Flg_new, Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.	6.61096e-11

>NZ_CP048209.1|WP_162354688.1|123330_127242_-|AAA-family-ATPase
MVIAKLLAKSPEDRYQSAYGLLDDLQQCRKLLTADGKLSPFELGRLDARRTLRFSEARYGREDAIRQLESGLEMAIGGGQSLRWVVGEAGSGITTLVQDLRHIAIRRGARFVEGVSSASRQSDTYEPLIQALRQWIQQLWSEPAEVLEKVKERLRTEFGREQRTIAALLPEAQPLFRTLGTISVVEDEGENNRRFGFILPRLLRCLTECLPALVLFIDRLEHADAGTLEVLRELAQGKAVSGLLVIGACGIALARREANATAASWLTDRMNDYPEERVALLPLGYEEVWRYIADTLHDRSLRTRLLARAAYNRTGGSPRELRRLMEDWLMEKKLAFDDWNRQWTWDEDAVRSAPNAQADLQRMNEHYAKLPEDSKALLAMGAAIGSSFGLLLLAGASGCLPEEAMVKLRVAETEGIVGCEDQKMPPGNGRDRSYVFLHDHLRRLAYACDAERNAQRHWRIGQLLRSDLQEGEGASLLAAIDHLNLGVAAMPEREAKQLAEDNLQAGLMVLEHADYALTIRYAETGLRLLGEPKEIESGSAYYRLKVMQSWALYMRGERVQARDLLLDLKSRGERLSRAERARIWTVLIQLHVFENDGSVIRYVGDALREYGWKINAHPSVPLTIKELLQTRFVLSRKLRQLPSRHAHPDSDFEALCGLMLELAFPMIVYSPAASMVLYARFIRYGIGEGMNEALVCLIGMYEVLLQRALPGFMRGSLFNELVNLPELNLSTSRYGYRLAYIKGMSVQMENPAEGWSYLEQALRRGLESGDNGFVNMSVVTCFITHTGDVYKLEALLDYFAKRVRPKANEKTTEIALIASGYAAALRDETKMERFIAIPNSGITPSEWQSDDNFSYCCKLEAAAVSGRYREALYWAKRARGNEMGADWVRIRKHRVHETLALAASYPYADSRERKRIRQALRKQLRKMTRWEGYLGVNSSAHKLLQAEWERIAGKPSDVLNEYWSAAKQARAEKNGLLEGIACERLAIYYEEELLSRSGAMVAMLDACAAYSQWGITHKVTQIRRERPDLTSSASKTYDALGWGVDDRASLGLPQPDDWVAQEIAASGDVGLRVVIGNDASEGEWPAQLLEAALRQTGADRGLVVSFGNDGFAIEARLDAMTTLGASALYAESVLRHTMGTKEPVVLADAYLSYFAKDAYFTEKGPRSVLSMPLTVPGEKAAFALYLENRHVSNVFASRDVSVLEWLATREIYRSLVANKHAATSEAYVAQEARSESDAIIEPLTARESAILSAIAAGLSNREIAEQFDIAETTVKTHTTRIFGKLGVKRRGQAVARAKVLDLL
>NZ_CP048209.1|WP_162354687.1|123063_123204_-|hypothetical-protein
MGDNGDAKLAQLSYPYGVAADSSGNLYIADLTNSQIRRVEAEPNVK
>NZ_CP048209.1|WP_162354686.1|122429_122813_-|hypothetical-protein
MYNGLTMAIDSFASYVEREIPVPDGVTPSQVTTAIIVRALILAYNEVLYPYHKWFMKVLEGVASKPNNLFQLMNNVLQHKSKESLETLYECVTQFYEWPRSEKGWHIRFMLDSELNWMTGHVPVADL
>NZ_CP048209.1|WP_162354685.1|120699_122235_-|ATP-binding-protein
MSELFIPIAYEDIISNFPSSELDLKLMEFVEPNADMEIEINTLCLETRHSGKIVFILGRPGTGKSTFIHSLKWRPNISLRTLVSVDAAEIIKENNLSELLDEIKNISLEAIEKKDKGPTALIIDYLEDLQGFEEGNIKSFFRNLNGVLRKSPLLIIWPVTEKREVDAMLSYAESVSGTLFLKGKEVLAFTGPHTDKFVDIAKRTLSVLNAGKELDDFNLIHEDLVDTLIAVLKLPKIDINLREYYKLLKTHWQQKSGYLRDINSKIPKPTEVWFLFAYKNAEDIVAQFSRKTTRIEDAWSVITDRFSEYIDNNSQRKEAWNARRLQLAFYGALKTRVMYMPTNTLVSILASYSEHAELNKLLDSMNIPENWGNKSKAISSLKRSPMYRQLVGEVYPSGKRKGGPTGVALEKAEPIFGKVVNWISTAGSDKALNKGISIALGDAGIGNSSSEKPHPWIPGIIPDIFIDLPDKQICIEFHYTNKSEPYVLADYVLKKLDVYVAQLTSLISLKL
>NZ_CP048209.1|WP_162354684.1|118914_120132_-|Abi-family-protein
MPGDKSFNTIFDQIRLLKNRGLQINNISSAKEHLQEKNYFDLINGHETLLLDAPRQPIKKYTKKSFDNFLRLHDFDRQFSSLILKKISEFEIKLKTTIAYHFCKNHCSTLGDNNNYIDINYYSVPGLTDGPKQYVSFFYNSNDQERTHKLFRSNYKYKGKFRGTFNGIVTYQPSKTILEGIFTGRFGSFSIREIKSGRCMFKNSNQTALLAALHTANMISGSTVSLNINIQRDETIQGLNYIDDCKLKYSYINEYNNPPFWVVIKTLMLNDLIILMYGFKKRTLDAILRDFNMKPYEKEKFLNSLEIIRELRNSCAHFELINRFRTSQNLKINNHLISDLHLSPMRSQYVIKLFDVLKVLRAFIDLSELKVFIHNFWNNEFKYGNGQITVALFDRMGNSNVNDWV
>NZ_CP048209.1|WP_162354683.1|117984_118755_+|hypothetical-protein
MKNIDKKQLKIMSMEFRTIANRLITCNQQTGMPLLKKFLGFIDENEIISEYVQEHVRIEDFEPIERGTAFYSMGDTKQEEISYTYQYLKHAAGNFHNFYYDIASNYASDAKDSVKEFCNRIILPFVNYIEGYLTEIGIRMGYDEDVKFVINLNGGVAQVNVANDNSTLNATQNNGIDAIQLESLISKVLESITDDLSPQEKELITDNIEVIREETKSSSPRKGFINTALKGLRVINGTAQFGAAVVALIEFISKAL
>NZ_CP048209.1|WP_162354682.1|117542_117998_+|TFIIB-type-zinc-ribbon-containing-protein
MSIIIGEVSIPADDQGFVLLQCPLCGEFFKVRPRDYQADDVIEIWCPSCGLKAENYFTDDVLELAFKKTRNYAYDLIHNELKQLERKFKGSFVSFKAGKKPTHEEEYPINYGIEALEVIKYPCCKREAKIKPIYILCGSYCPFCGVRYEEY
>NZ_CP048209.1|WP_162354681.1|113928_117006_-|hypothetical-protein
MIAATKMHIPHERHTLVTRSGLLHLLDEGMGAKLTLLFAPSGYGKTTALSEWAKQSGKRVAWVSLAKQDDHWITFWNTVIASIQHRVDGFGRTVWPLLAQGPSASSASMEPAMTALLNELNQLPDELVIMFDDYHLVAMPAIQKSMSYLLELLPNHIHLYIASRSGLLFPTTRLLAKGDMRRITIEQLRFQPEEVSDFFRETTTLNLSAEQLHILHNQTEGWISGLRLAAISLERSRNLAESIRQFSGHQQHIADYLFEEVIRDLPEAMRDFLLQTSVLSQMNYALCEAVIGQAGGQQQLEQLERLQLFIIPLDNQRGWYRYHHLLSDFLQSMLTRTNPELWVQANVRAAQWLENNGFVEEAAEHYLAVRHYEGAVRLIEGHLNELLISGKNVVVARWVMQVPEQYVSNRPSVELFCLYVMVGIRQFSSIPDRAERLRIRFEAMKNLMDADVWRATMGEIYYICASAAYVAKDLASTVEYFILGDEFAPEQSLFIQGGNNRHYSVEEFDDHLSYINDYHGAAQLFTRMIDHWREQVNHPYASPMYASYAKLLYEWNQLEAAEGWINRIQRAKGFAPVPRNLYQLDVAASRIQQARGHSFEAAMLLEQLKLKIDSPDYEIFLRKIEAEQASLAVRQGDLASAQRWLKQCGMSYSDETTLDQVPEQLALVRVLAACGQFEPALSLAERLYHLLTKEDRLRDRIHILILQSMALYHDGRIKPALAKLDIALRIARPQGFIRSFVDEGSAMAELLSIYVQSYGDKGTGSKEVSNYASLLLHALSDHRALPRMKIRCFGRLRIETENGTAMKWRTSKTEELMAFLLHHRGEAVSRDRILDSLWGEVQVDRAGAQFNTTAHYLRKALSQIGLDGIVQYVEDGYRIDMGQLECDFDEWDRLLAAQTQIDDMKLRDFASELVQLYGEGYMAGTSYEWAEPMRMRLESEYVAILIRLHEREKEKGQYDAAGELLRQALARDPLNDYIHELLIRVLLLAGDRFSAIKQYESLRKMLLTEFGMEPKEAVRRLLDMN
>NZ_CP048209.1|WP_162354680.1|107029_113761_-|hypothetical-protein
MNKGLKRTISFILLVSMLVSLMPMGALAAPTSGVAPTVSSTKPITWHDASQNAGTAQNTFQDVKSTDWFYDDVMYVQQHGIFTGMGQGTFSPKGTMTRAMYVTVLGRIAGIDVSKYTASVFTDVPLTAWYAPYVQWAVEKGITSGTDSYAFAPNATLSREQMATLTLRYFESENIAYQTDASVMTEPNDIADISPWAVDAVLKLWQAGLLTGDAKGNFNPHANATRAEAAAFCMRSNEVVKVWASQNQVGPTPTPTPTPENENASSGGGGSNSGSSNAATYTITFETNGGSAIASLKLHKGDALSNLPAPIKQGFIFQGWYKDSAWTRVLVEGEPVTGNMTLYANYMASVDRAVESIPSVTVLDQAPTFTIDVTDATGSMTAAQVQAGMTFDSSANPAFAGIVVTGAKGQFKVTSAAQGGKFEEGNTYQLTLTDTNLSFQGQDATTTIYVFSIAKQAIMHVPLNPDMIYLSFADVSNMILDGKDVDSPAIPVITTGVGDSETDLNAANSSGGTFDYTGSTVIQAGDIVAIYEGVRPDLRTAETSDTDNGEVAYVRITAINGNTYIYIHADSKNVMTKPDILPVSEAADTDGDATNHSITVEHATMNYSDSQYAPLGLNELTVVNAGDFIAFYNGEFDSQATSAGYGLITSITHDAEMDIITYTDATLDQVTSALDVYQQQALDGDQLLSDADVATLEGQIKQHAVASGFVVQAADYLSDLALHTDSFKQQYDALAPMAAESAGSKVDVENLTVVPSISRTLTNLSGSGVSVSLQVGADIVIHMNDESDIVIHLTATFVEEMRLDLSINGDTQWHWYWFIPILDDYIITANLDAYTFTGINITAEIATVAPDQLEDALTDWLEAKKAGRIGEVQDIATELQALIEGVQDTGVDATTLKARYQSILEDETEWVPLINKELVDKRVRVVIGIVEVKFSVDFVVSANVNLTVGVDFSYRSAKRYSATVRIFSFTGSSSTVSLSGDGDYQFKFYVLGTLGLRAGVKVELQAGVGSVDWDSIGISVEPGVYLNLWGFFYYELKSSGGKKTTASLGALYLELGIYLESEVGAQLGDGLLSANVPLYDNTWPLLSVGSEESIDDFAYSQDDALAIKLSGDTTKSITLPSGIFTMSVMSMTTGDTYSKAFDKSNFTITVDNTNFTYDSKTNTLKPTDPNQSAASGTMTVRWNNAPLAFTSSPIQRTYDLTWTKYSGNKALVFNAQTGGLLTYIFAAYKDNITAPSDPKLPGYSFEGWYTAPEGGTKYTVPATMPGETVWLYAHWAVRTDMPYTVEHYLVDPNSGSASLAATENFTGTAFTEITLKNTDRFKAQGYVYSYFTGGAGVGSNYKAYINGYGTTAVKVYYVRDTRVMTFNAGYAGGQTVTNSLQIGKAFTWRPAISRPGYTLVGWFKSDGITSIPGTVPEQDTAYTAKWQARNDTSYKVVYLQQNMVVNNQLKPVLSDTYTVVDQQDYIGTTDTATITAEIKSYEGFTFNSSNPATLVSSTISGDGSTVLRLYYTRNMYKVTYDLGGRAFVGDTDDPYVFTYPYGATVGSVATINKATAQGSGEILTGWTPSLPTTVQAHDMTFIAQWNSKTASYTVTHYRPDTTGQYTITEKETLSGPVGATVTATPKSYEGFTVDSAVTAAVASGTVIDSTSSPLQLKLYYKRNSYKVTLDPNGGVVNGRTGNYTLSTLYGNSLSFINLLSTTRAGYAFAGWSPAIPTTMPLGDVTYVAQWTPDYTISKVSIDNTTPAVGDTLNANVTMGDGNAAGSRVTYQWKIETAAGSGTYSNATGTGNTTASYTVATADRGKKLQVAVTGVSPIVGTQTATTGAVSVPITSVTIGNMSPAFGDILTASVTMGDGSAAGSQVTYQWQVETTAGSETYTNATGSGSTTASYTVAAADEGKQLRVVASYMGRAVGAVTSEPTSAVGVYIKSVAVNDSSPRVGDTLTAAVTMDDGNPAGNRVTYEWMVQDIVGGDRYVSATGAGSTTASYTVAAGDLGKKLQVWVYGANEGLGMVMSTATNSVQEAGSTSESLPEWISSSGALDLDSAIVTVVSSTEVSVSGATLTDDWTLPEGVTLSISDTMLSGHTLTLAEGATLNVSNSTLDGNIEVSAGATLNASNTTLGEGYYWNVLDDATLNASGTVTLAMAATLIVDGTFNILSSATVVNDGTITGYDGTGVITNNGTITNNSSITNSGMITNGSSITNFGTITNFGTITNNGTIANTADAIFNDSGTFTGDAPITI
>NZ_CP048209.1|WP_162354679.1|105703_106945_-|hypothetical-protein
MKQIGTISLVLTLLFGGLATSLIAATLPASAIQRVLSNDSGTNFATRILDDLNAVRTAMGLPTVKLNPYLTEAAQNHAVYMIANVYYNHDENPLGQGFTGVTHADRIHAVGGDTSIPTWEIMTVDESDPHAIIEEFLNTAYHREPLIAPEATEIGVGIYGSAVVIEIACAANTMGYATYPYDGQTNVVTSFYGHEIPNPIEPFGAARSGQIITIKTPYLLEGIDVTLTNSAGEPIPFFKPFTASNYWHIIPKSPLAYNETYTVSVTFTPWAGSDASKTFNKTWSFTTESDAASYSQNNIGIQLNGTYITVNPKPRIMNGSTFIPLRGVFEKLGATLSYNAKDKSIDIIKDSTTIHLQIGNKTATVDDKPITLTTVPFTDMNGTTFVPLRFASEALDAAVTWDAANWTAVIHSK
>NZ_CP048209.1|WP_162354690.1|133065_133650_-|TetR/AcrR-family-transcriptional-regulator
MNKYEARTNKKKDAIIQSALELFREKGYTNVSINELAATSGVSSVSIYNYFGNKEGLVKECMRILIRETTQAVECLMKEEVGFKDKLLRAVALCAEMPNQLLDRYFSKEAIDDKVFIQLFSESAKEIRMDILSVFIESGREEGSIDSSISTETVLEYLQAIAGIQDQWGTASEFRTKADELYKLMLYGLIGQIC
>NZ_CP048209.1|WP_162354691.1|133815_134766_+|ketopantoate-reductase
MRILMFGRGVISAQYGWALEKARHEVEFYVRPGRKEQFGPFIDLDLLDGRTSLKGVPIKEQWPIRMIEELSPHHSYDLIVLSVNHNQFEDVVKVIGPNVGNATILIFNNVWKDLREFAEGLPMGQIIWGFPGAGGGFSSPNKLEGGFLKSIYLQTEATAASAPRHRSVVELFRQAGFSFSWQKDIRVWYWFHFIMNAGMAAEALKEGGYRNLYQSPKKVAKAIRLMREMLPMITAKGGKVGLGTSFAMRLPAGLIGYAAFKILKGNSVPAAIMERMERTGYISQESFAHFPNDILAEAHNLGVSLPRLEAMEQHFK
>NZ_CP048209.1|WP_162354692.1|135071_135335_-|hypothetical-protein
MNKEQIHTSKTIVSVGFDVVFLEDAMKKGSKVVWDNHFEECIKQGLNVEVWMKDEMQDSGRIESFSKESFKIDGGYFLRNNVLILVE
>NZ_CP048209.1|WP_162360238.1|135336_136350_-|hypothetical-protein
MFLLFNTDLVQEQIRSFQFTADIIDTIGQRFNEIILPIPKDRAFRTEVVTKLQKALSERVIGKAFIKHMPKIIEQVLLNDDIDEIRKLEALSIDEITSLITTETITSEFGGFNCFTLTSSQIKDSIFIPKYYDPTIEKELKELEHNCELVSMGELKQSGVITYYTGDEIGKMAYGTGSIPFIRTSDFSNWEIKHNPKQGISEEIYQEYATREDVREHDVLLVRDGTYLVGSSCIITEYDAKSLYCGGLYKIRCNDWKRIDPFLLLGLLNSYIVKRQIRTKQFTRDVIDTIGNRIDEVVIPIPKSEMTKKKISDFIKNIVETRIHSREEISSLARKVI
>NZ_CP048209.1|WP_162354693.1|136802_138617_-|N-6-DNA-methylase
MPDNATLHTDEVKDGYLIDFISGKMVKDTPEEREAVQVFSEILVKDYGYPKEHIQTRPQWRVKVRPSDKKKEYPIDIAVFDNSNKHEDDISIIIECKKKNRKDGRSQLEDYLRFSKARMGVWFNGEQRLFLVKTEKAGKVLFEEIPNIPRYGQRLEDVGQFTRKDLKPATNLKVVFKTIRNYLAANAVGATRDEIFAQQLINLIFCKIYDERFTKSGDIVTFRAGIDEEDTKVKERVVKLFEKVKTQYSDVIEVADSITLDANSLTYVVGELQNYCLVDSERDAVAEAFEIFIGPSLKGPQGQFFTPRNVVKMIVDMIDPSPTDKIIDPACGSGGFLVEALRYVWNKVEAQGTELGWPEHEIFSEKQKVAIRNFRGIDKDSFLSKVAKAYMAILGDGRGGVFCENSLETRENWSSATRGEINFGGFDVVLTNPPFGKKLAIDSEDILSRYDLGHVWKMNDSGEFEKAGRQEKQPPQILFIERCLDLLRTGGKMGIVLLESTFGMPKYRYVVDYLTKRAKINAIVAMPEDLFQPHTHAKTCVVICEKVDEVPTEPYPIFMSEVEWCGHDSRGNPTYRVNADGKRVLLDDTVNVAAIYHDGRRKRK
>NZ_CP048209.1|WP_162354694.1|139491_139683_-|hypothetical-protein
MKEGQFLKLGTKARQYINFKSKATGQSISLVVEDLIERDMILNYEVYTRMEEFFKSNTDYHSE
>NZ_CP048209.1|WP_162354695.1|139688_140045_-|hypothetical-protein
MELICIGRYEHNGLIAYVARQQIIYNREQSIYIDITALADKLKLTKDRLNTLINSSIQAKNSVSRIKMGNTDRFVFGIKTTGLNSLYSILTEQVDGSVLRLIKDEIKQLVSNIAGVGR
>NZ_CP048209.1|WP_162354696.1|140876_141362_+|helix-turn-helix-transcriptional-regulator
MKVRTITKEELEKLKVSKLGTRIRMIREFLIELYGKENYSASRVANEAGVTPQNILQIEKGKITNPSYKTVIAIAKYFRVHQEIFYDDFYDNLSDIEPFEIGDVSSVASSNSENQSKKSNCVITVVGAGETISEVLEITDVEIRRLLKRIRLEIELIKQGE
>NZ_CP048209.1|WP_162354697.1|141370_142414_+|recombinase-family-protein
MKDIKVAIYVRVSTEEQAEEGYSIDAQLENLRGFCKAKGYSIIKEYRDEGISGKSIQGRKGIQSLLEDARLGIFSNVIVWKTSRMSRVQIDLLQIVSTLQKQGIGFISMTEQFDTSSPSGKAMFQMLGTFAEFERNQLAENVKLGMRQKARQGEWCGGTILGYDIEEGKLIPNEKEAFIVQKIFELYCQCKGLKSIANQMNHEGYTGKNGNPFSVNSIRTILHNPTYIGKIRWNKQNNWNEKRRKGTQEPLIVDGKHQSIISLETWDTAQDLINKKTFTPSRLYTGKFPLAGFLRCPKCGAGMVGTNHTRQIKSGIVHYRNYVCGNFHYKIPVEAKKSPWNRKECLW
>NZ_CP048209.1|WP_162354698.1|142475_143759_+|IS110-family-transposase
MKFNASNAINQRIEKITPQHLIVGIDIAKETHVAAAVNLRGIQQGRKLVFSNHADGLERLLRWVQDLQRAYGFTEVIFGAESTGHYFLNVAFALRKRGLTVVLVNPLTTKRNKENRDNKPSKNDAKDAVTIGDVVSRGYYTEWVVHDPVYRQLHALVNEREAMSDALTVIDNQLQTAIDQVFPEFWSVFKHWDGSRARATLRSFPLPADILANTLPELIEGWRTSGLKRAGGTTGIQIASQLLLAAGRSIGVTEAAELGRRIQRLLARYEHLLAQQAEVDVEIAALLERLPPAVLRPLQEVGLSPWFMAVILANTGDLRRYTHGQQLLALAGLNLAERSSGTCKGQVKLAKRGRRQLRKYLYLAVMMLLCNHAGFKRWHTYNIKTLRQKGIHSVLKLVGKLCRILVALAHSGEAFQEQKAAPLRNAT

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Crispr_ID: NZ_CP048209_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_2

486546-486695

Orphan

Consensus_repeat	Method
ATAAGCTTCGCCTTCTGCGTACGCTTGAATTTCTTCGGAATGAAACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_2

>merge|NZ_CP048209|2|486546-486695|CRISPRCasFinder
ATAAGCTTCGCCTTCTGCGTACGCTTGAATTTCTTCGGAATGAAACGCGCCGCGTCGCCAGCAATGGCACTGGCCGTTTCACCTTGAAATTCAAGCCTGTATAAGCTTCGCCTTCTGCGTAAGCTTGAATTTCTTCGGAATGAAACGCGC

>NZ_CP048209|2|1|486546-486695|CRISPRCasFinder
ATAAGCTTCGCCTTCTGCGTACGCTTGAATTTCTTCGGAATGAAACGCGC	CGCGTCGCCAGCAATGGCACTGGCCGTTTCACCTTGAAATTCAAGCCTGT
ATAAGCTTCGCCTTCTGCGTAAGCTTGAATTTCTTCGGAATGAAACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162354970.1\|485461_486409_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP048209.1\|WP_162354972.1\|488030_488918_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|235450
NZ_CP048209.1\|WP_162354963.1\|477227_477899_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
NZ_CP048209.1\|WP_090583454.1\|490949_491219_+\|HPr-family-phosphocarrier-protein	unknown	unknown	gnl\|CDD\|376329
NZ_CP048209.1\|WP_162354976.1\|492274_492592_-\|sporulation-histidine-kinase-inhibitor-Sda	unknown	unknown	gnl\|CDD\|370219
NZ_CP048209.1\|WP_162354971.1\|486814_487765_+\|ROK-family-glucokinase	unknown	unknown	gnl\|CDD\|273246
NZ_CP048209.1\|WP_162354968.1\|481402_482092_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	unknown	unknown	gnl\|CDD\|235067
NZ_CP048209.1\|WP_162354964.1\|477969_479253_+\|histidinol-dehydrogenase	unknown	unknown	gnl\|CDD\|376389
NZ_CP048209.1\|WP_162354975.1\|491397_492171_+\|SIMPL-domain-containing-protein	unknown	unknown	gnl\|CDD\|225516
NZ_CP048209.1\|WP_162354978.1\|494103_495141_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225263
NZ_CP048209.1\|WP_162354973.1\|488926_489913_+\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|376670
NZ_CP048209.1\|WP_162354966.1\|479899_480538_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|237288
NZ_CP048209.1\|WP_162354967.1\|480647_481406_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP048209.1\|WP_162354969.1\|483686_485429_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP048209.1\|WP_162354979.1\|495267_496272_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl\|CDD\|223135
NZ_CP048209.1\|WP_162354974.1\|489919_490849_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|273194
NZ_CP048209.1\|WP_162354965.1\|479299_479899_+\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873
NZ_CP048209.1\|WP_162354962.1\|475985_477221_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|237043
NZ_CP048209.1\|WP_162360259.1\|482424_483375_+\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP048209.1\|WP_162354977.1\|492835_493426_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162354970.1\|485461_486409_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	1.39714e-154
NZ_CP048209.1\|WP_162354972.1\|488030_488918_+\|RNase-adapter-RapZ	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	6.21739e-164
NZ_CP048209.1\|WP_162354963.1\|477227_477899_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	3.61042e-121
NZ_CP048209.1\|WP_090583454.1\|490949_491219_+\|HPr-family-phosphocarrier-protein	gnl\|CDD\|376329	pfam00381, PTS-HPr, PTS HPr component phosphorylation site.	4.31016e-38
NZ_CP048209.1\|WP_162354976.1\|492274_492592_-\|sporulation-histidine-kinase-inhibitor-Sda	gnl\|CDD\|370219	pfam08970, Sda, Sporulation inhibitor A. Members of this protein family contain two antiparallel alpha helices that are linked by a highly structured inter-helix loop to form a helical hairpin; the structure is stabilized by numerous hydrophobic and electrostatic interactions. These sporulation inhibitors are antikinases that bind to the histidine kinase KinA phosphotransfer domain and act as a molecular barricade that inhibit productive interaction between the ATP binding site and the phosphorylatable KinA His residue. This results in the inhibition of sporulation (by preventing phosphorylation of spo0A).	3.19704e-07
NZ_CP048209.1\|WP_162354971.1\|486814_487765_+\|ROK-family-glucokinase	gnl\|CDD\|273246	TIGR00744, Glucokinase_Glucose_kinase., ROK family protein (putative glucokinase). This model models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution. [Unknown function, General].	2.19417e-81
NZ_CP048209.1\|WP_162354968.1\|481402_482092_+\|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE	gnl\|CDD\|235067	PRK02759, PRK02759, bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE.	8.84702e-121
NZ_CP048209.1\|WP_162354964.1\|477969_479253_+\|histidinol-dehydrogenase	gnl\|CDD\|376389	pfam00815, Histidinol_dh, Histidinol dehydrogenase.	0
NZ_CP048209.1\|WP_162354975.1\|491397_492171_+\|SIMPL-domain-containing-protein	gnl\|CDD\|225516	COG2968, COG2968, Uncharacterized conserved protein [Function unknown].	7.25527e-48
NZ_CP048209.1\|WP_162354978.1\|494103_495141_+\|hypothetical-protein	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	4.28209e-65
NZ_CP048209.1\|WP_162354973.1\|488926_489913_+\|YvcK-family-protein	gnl\|CDD\|376670	pfam01933, UPF0052, Uncharacterized protein family UPF0052.	2.3748e-142
NZ_CP048209.1\|WP_162354966.1\|479899_480538_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|237288	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	6.89634e-130
NZ_CP048209.1\|WP_162354967.1\|480647_481406_+\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	0
NZ_CP048209.1\|WP_162354969.1\|483686_485429_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.81391e-11
NZ_CP048209.1\|WP_162354979.1\|495267_496272_+\|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl\|CDD\|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	0
NZ_CP048209.1\|WP_162354974.1\|489919_490849_+\|DNA-binding-protein-WhiA	gnl\|CDD\|273194	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA. This family describes a DNA-binding protein widely conserved in Gram-positive bacteria, and occasionally occurring elsewhere, such as in Thermotoga. It is associated with cell division, and in sporulating organisms with sporulation. [Cellular processes, Cell division].	1.19929e-134
NZ_CP048209.1\|WP_162354965.1\|479299_479899_+\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	9.74193e-119
NZ_CP048209.1\|WP_162354962.1\|475985_477221_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|237043	PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	2.17375e-143
NZ_CP048209.1\|WP_162360259.1\|482424_483375_+\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	9.46487e-159
NZ_CP048209.1\|WP_162354977.1\|492835_493426_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	2.25711e-148

>NZ_CP048209.1|WP_162354970.1|485461_486409_+|thioredoxin-disulfide-reductase
MYKAIIIGTGPAGLTAAIYLARANMNPLVIEGPEPGGQLTTTTEVENFPGFPEGIMGPDLMANMRKQAERFGAEFRTGWVNAVDTSKRPFTLQVEGQGELQAEALIISTGASAKYLGIANERENVGRGVSTCATCDGFFFRGKKIIVVGGGDSAMEEANFLTRFASEVVLVHRRPEMRASKIMQDRARENGKISWALDRTPLEVVANGMGVTGLKVKNNATGEEEVIETNGIFVAIGHTPNTKFLNGQLDTDETGYLVVKPGTSETNIPGIFACGDVQDHKYRQAITAAGSGCMAALDCEKFLEGHAVHDWSQAL
>NZ_CP048209.1|WP_162354969.1|483686_485429_+|tetratricopeptide-repeat-protein
MKEKKIALADRSTKIIPIQWDATYFFERAVRSMDRYHYDKALKYFRRAAEYEPENPVNHCNMAGILSEMGNYEESNRILDSIVNELDPEMTECHFYMANNYANMEMYEAAEDSLVRYLEEDAEGQFLEEAEEMMELLHYELERPTKLAFIKAREGFFEHDRARAMLEDGKFAEAVRLLESIVEKNGEFLAARNNLALAYYYMGMFDKAMATIKQVLELESGNLHALCNLAIFYQHAGDKEELAPLVELLCKTVPFHQEHVFKLATTMGILGEHGEAYRHFMRLLKDGALKSDPCLFHYAAVAACNMGRYDESRRLWQQVKKLDPESHVPGYYLEQLERMENGQHAAPASYHYHLPFEEQFRLWEKSTESLPDHMKRDPLVRSSFFWALRHGDRHTKLQVIQALGMIADNEVKDALREFIIEPQEDDYLKRIAIFVLRSIGVHESLHAILEGEETVIEHSRMPSRLPIWEDKWQSVLEAALARMNKHYDLVQQHDLLTLWIEFLSRVYPDVPKFGKVEGWAAALEYLTAKMHRREISYHEVSQRYGVSIATVSKCAKRIDEICGIKEKMRMIFPALADHRE
>NZ_CP048209.1|WP_162360259.1|482424_483375_+|ribose-phosphate-pyrophosphokinase
MFSDKLRIFSGSSNPKLAQRISEELGLPLGKIKVSRFKSGEIYVHYEETIRNCDVFLVQSFSHPINDHFVELLVMIDAAKRASARTINIIMPYYGYARQERKAAPREPISAKMLADVLTTVGATRIITIDLHAPAIQGFFNIPVDHLTGLDLISDYLKAKNIKNPVVVSPDAGRASTAEKLANYLDAPFAIMIKKRHAHNESTITHVIGDVEGGTPIIIEDMIDTGGTIVNVVEGLKERGAEDVYVCATHPLFSGPALQRLDHPNIKEVIVTDTISIPDNRSDRFKVLSVAPILAETTRIIIEGGSISTLFKNAGI
>NZ_CP048209.1|WP_162354968.1|481402_482092_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE
MSTSKTLEAAAAEIKWNEAGLVPAIVQDVKSKEVLMMAYMNRESLALSVESGETWFWSRSRSELWHKGATSGHTQRIVSLHYDCDGDTLLVRVEQNGPACHTGSYSCFTGEIQGVKGTEAGASAFQQSSDRFAMLNQLEATIAQRYVERPEGAYTTYLFEKGVDKILKKVGEESAEVIIAAKNKDNDELRCETSDLIFHLMVLLRDRGLSLDEVMTELGRRHNKTKPSA
>NZ_CP048209.1|WP_162354967.1|480647_481406_+|imidazole-glycerol-phosphate-synthase-subunit-HisF
MLAKRIIPCLDVKDGRVVKGVNFVNLRDAGDPVELAAIYDKEGADELVFLDISASVEGRATMVEVVKRTAGEITIPFTVGGGISHVDDMKRLLRAGADKIGINTAAVKNPSLVKDGAKKFGSQCIVVAIDAKFNPAWGEWEVYTHGGRTATGIKALAWAKEAEQLGAGEILLTSMDADGTKDGFDLKLTRAVSDSLGIPVIASGGAGKVEHFHDVFLQGHADAGLAATIFHYKEMTIREVKDDLRQKGVEIR
>NZ_CP048209.1|WP_162354966.1|479899_480538_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MIAIIDYGMGNLHSVSKAVERLGCEAVVTADAKTIMEADGAILPGVGAFGDAMQNLRNTGLDEVTRFYAASGKPLLGICLGMQLLFSESEEYGPHQGLNLLPGTVIRFKGDFKVPHMGWNKLEFRQNTPLFAGLEQGHVYFVHSYHVKPERASDLLATTDYNGQVTAIVGRDNVYGMQFHPEKSGDLGMSLLRNFLALTSVREPSVIEADAR
>NZ_CP048209.1|WP_162354965.1|479299_479899_+|imidazoleglycerol-phosphate-dehydratase-HisB
MADNAIRAAEVARKTNETDIKLSFGIDGTGISKLETDVPFLNHMLDLFTKHGHFNLTVEARGDVEIDDHHTVEDIGICLGHTIREALGDKRGIKRYASVFVPMDEALAQVVIDLSNRGHFEYRAQYPSQQVGSFTTELVHEFLAKLAMEARMNLHVIVHYGFNTHHMIEAVFKALGRALDEATSIDPRVQGVPSTKGVL
>NZ_CP048209.1|WP_162354964.1|477969_479253_+|histidinol-dehydrogenase
MRKLRAEQFGLTRKVDYGSPEQNETAARIVEAVRTEGDAALLRYTEQLDRVQVDAAGLRVTEEEIQAAYDRVDADFLTAIRQAAANIRAFHEKQLRQSWVDVQPDGTMLGQLLRPLKRVGVYVPGGKAAYPSSVLMNVIPAQVAGVPEIVMVTPPATGGKTGIDPYILVAAAEAGVKEMYRVGGAQAIAALAYGTETIPPVDKICGPGNIYVALAKRAVFGVVAIDSIAGPSEIVVLADETADPAYVAADLLSQAEHDEMASAILVTASEALADAVATEVEQQLSTLPREGTARQSIEGYGAILLAETMDEAIAAVNRMAPEHLEIMTAEPMTLLGRIENAGAIFVGPYSSEPVGDYFAGPNHILPTNGTARFSSPVNVDDFVKKSSLIYYSKDALMANGDQIIALARHEGLEAHARAIEIRLERER
>NZ_CP048209.1|WP_162354963.1|477227_477899_+|ATP-phosphoribosyltransferase
MNQENLQAADSGRELLKVAMPKGRIYKVASKLFREAGVPIPSDFDDTRKLIIELPEAGMSFIMAKPVDVPTYVEYGVADIGIVGKDVLMEENKDVYELLDLGIAKCRMSVIGLPDWQPVIHPRVATKYPSVASQYFREQGQQVEVIKLNGSIELAPLIGLADRIVDMVETGQTLRENGLVEMETIFGITSRLIANRVSYRMKNEAIQSLCDKLQSAIAAKPGM
>NZ_CP048209.1|WP_162354962.1|475985_477221_+|ATP-phosphoribosyltransferase-regulatory-subunit
MSKPKVFEKPIGVKDYLPHAVTKLRQIENQVLACMGSWGYEQIMTPTMEYYDTVGVASSTSDQKLFKLLNNRGTTLVLRSDMTAPIARVVASVLKDVQFPIRLSYHASVFRAIEEEAGREAEFFQTGVELVGDASPDADAEVVALAIASLKAAGVSRFKIAIGHVGFLNGLFEEALPGEHEAQEELKAFLLGRDYVGYRERLRSLTLSDAMRSELEGITRLRGGQEICSQALALSLDATAQASIRHLCEMWDALAAHGVCEHVLIDLTMIGDFKYYTGMTFEAYAADLGFPVASGGRYDNLLQQFGRPAPATGFALKTTRILELIGAGGEPNAERVLIAYDADGRAAAFDKARTLRESGTAAAVVTERVDADARQALREAETAGANDGELRYKGAAFTKLLTYFGGSRERE
>NZ_CP048209.1|WP_162354971.1|486814_487765_+|ROK-family-glucokinase
MSEKIVVGVDIGGTSIKVGICNIEGALLQTYEGPTEVEKGSDIVCENIAAYARLIVDQSPYEWDQVEGVGIGIAGFLDIPRGYVHKSVNLFFENVPLKDILEAKLNKKVLVNNDANVAALGEAWAGAGRGISDCVCYTLGTGVGGGVIISGKIVEGFRGMAGELGHMTIVPDLEAIQCNCGNKGCLETVSSATGIIRMANDAVERGDRTSLSFVENITAKDVIDAAKAGDEAAARIVNRAAFYLGKSMAAVAVVLNPQRFIIGGGVSKAGEFLFEQIREVFRKTAPDMAQEGVEIVPAILGNDAGVVGAAGLIIRS
>NZ_CP048209.1|WP_162354972.1|488030_488918_+|RNase-adapter-RapZ
MEAGTAKARLVIITGMSGAGKTIAVQSLEDLGFFCVDNLPPVLIPKFAELIEQSNGKIGKVALVIDLRGREFFTALSESLNYVKEHFTIGYEILFLDATDSVLVQRYKESRRMHPLASEGLPLEGIKLERRMLEDLKGWATQVIDTSNLKPAHLKERIKSRFTNTDLSTISVNVTSFGFKYGIPIDADLIYDVRFLPNPHYVDHLRPSTGQDPEVYDYVMKWPETQTFLAKLLDMLQFLIPLYHKEGKSQVVIGIGCTGGKHRSVAIAEYLGRMLGSSDTEIVRVSHRDADRDRS
>NZ_CP048209.1|WP_162354973.1|488926_489913_+|YvcK-family-protein
MTEHRQQEQKPRIVVIGGGTGLSVMLRGLKEKPLDITAIVTVADDGGSSGILRSELQMPPPGDIRSVLIALADVEPLLSDMLKYRFNSGAGLAGHSLGNLMLAAMTDISGDFVSGVRMLSKVLAVRGRVLPAAGEAIVLKAETVDGTIITGESNIPKAGQAIKRVFIEPADVEPLEEAVEAIREADAILIGPGSLYTSIIPNLLVPKLAQSIVESEAVKIFVCNVMTQPGETDDYTVSDHLAAVHAHIGHHLFDYVIVNDGEIPEQVQQKYAEMGAKAVHLDLEEVTRRGYKVIADKLVLFRTYLRHDAARLSHHIYQLVENWMQRKR
>NZ_CP048209.1|WP_162354974.1|489919_490849_+|DNA-binding-protein-WhiA
MSFAGQTKKELTLIEADPCCELAELSALIRMNGSVSLSSRKVILDISTENAAIARRIYSLIKKQFAVHTELLVRKKMRLKKNNVYIVRIPARVQEILSELKIVSEGFVFNQGIDKEIIRKSCCKRSYLRGAFLAGGSVNNPEGSSYHLEIATMYEEHCQALVELANKFDLNARCIERKKGFIFYMKEGEKIIELLSIIGAHQALFKFEDVRIMRDMRNSVNRIVNCETANLNKTIGAAVRQIDNIKLLEREIGLESLPEKLREVAHIRLAHPDLNLTEVGEMLKGKVSKSGVNHRLRKIDELAEKIRNG
>NZ_CP048209.1|WP_090583454.1|490949_491219_+|HPr-family-phosphocarrier-protein
MTRHPVVVRLKTGLHARPAALFVQEANKFSSEVFVEKDDKKVNAKSIMGIMSLAISSGTEVTISAEGSDADQAVTALVNLVSKEELENQ
>NZ_CP048209.1|WP_162354975.1|491397_492171_+|SIMPL-domain-containing-protein
MMMMKPKWALVPALALAVGVGAMFGTGGHGVKPAYAVDNGAIVQKSTITVAGTGKIDAAPDVAYLNVAVEARAATAKEAQSKNATQFAGLTKLLYDTYKTDKKDVKTTGFSVQPEYEYNSKDGTSKIKGYLAVHNIQVTTRNLDGIGKLLDDLSASGANRVDGVQFDTEKQEQYELQALDKAMANAKAKGEALAKAAGKQVKEVLTITQNSANSGPIFYGKAEMAAATNAAADSASTSVQAGEITISTDITVVYEMQ
>NZ_CP048209.1|WP_162354976.1|492274_492592_-|sporulation-histidine-kinase-inhibitor-Sda
MKLTNPFASVRNFIRPNQPNTAYAPYAPAFEPNFQHASANEADTQNLFLPMQDRSLLLRPLSDTHLIEVYQEAKAMQLSEEFIALIEHAIEQRGLNVNTERQSPA
>NZ_CP048209.1|WP_162354977.1|492835_493426_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MESMNFVPMVIEQNNRGERAYDIYSRLLKDRIVFLGTPVNDMVANSIIAQLLFLAADDPDKDISLYINSPGGSVSAGLAIFDTMNFIKPQVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGAQGQASDIEIRAKHILKTRDTLNRILVERTGQTLEKIERDTDRDYFMSAAEAAAYGLVDKVIEKL
>NZ_CP048209.1|WP_162354978.1|494103_495141_+|hypothetical-protein
MHDLIAIQQQLLPDLLVVMRKRYLILRQVMLSDMIGRRSLAASLEMTERVLRAETDFLKAQELLIIDAAGMRISEAGRRLLDEMEPFYKAMFGLSELEEKIRRHFGLQQVVIVPGDADESPVTRRELGKAGCSVLRKAMGNNDVVAVTGGTTLAQVANQLTSQTPLKGNLFVPARGGLGESLDYQANTIASTMAKRTGAQYRMLHVPDHLGEEAYTSLMQEPNVREIVEVIRKARIVIHGIGDAMVMARRRRVDDTVVEAMTAEGALAESFGYYFDRNGAVVHKMLTAGLRLEDIMGTEVVIAIAGGRSKGEAIAAVMRFGHDDVLVTDESAALEIAAIIDKKPD
>NZ_CP048209.1|WP_162354979.1|495267_496272_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MVKVGINGFGRIGRNVFRAALNNPNVEIVAVNDLTDTNTLAHLLKYDTTHGKLDGTVEAKEGALIVNGREIKVFAERNPENLPWASVGAEIVVESTGIFTAKEKAELHLKGGAKKVIISAPASNEDITIVMGVNEDKYDAASHTVISNASCTTNCLAPFAKVLNDKFGIVKGMMTTVHSYTNDQSVLDVPHKDLRRARAAAENIIPSSTGAAKAVSLVLPELKGKLNGMAMRVPTPNVSVTDLVAELKVNVTVEEVNAAFKSASETSLKGILNYSEEPLVSSDYNGDPASSTIDALSTMVVEGNMVKVISWYDNEWGYSNRVVDLAAYIASKGL

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Crispr_ID: NZ_CP048209_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_3

803298-803380

Orphan

Consensus_repeat	Method
CAGCCCGAACCACCAGGCCAGTT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP048209_3

>merge|NZ_CP048209|3|803298-803380|CRISPRCasFinder
CAGCCCGAACCACCAGGCCAGTTTCACCCAGTCCACAAGCCAGTCCAAACCAGCCTAGAGCAGCCCGAACCACCACGCCAGTT

>NZ_CP048209|3|2|803298-803380|CRISPRCasFinder
CAGCCCGAACCACCAGGCCAGTT	TCACCCAGTCCACAAGCCAGTCCAAACCAGCCTAGAG
CAGCCCGAACCACCACGCCAGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355207.1\|803839_805243_+\|sialate-O-acetylesterase	unknown	unknown	gnl\|CDD\|377084
NZ_CP048209.1\|WP_162355204.1\|799560_800559_-\|BtrH-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379597
NZ_CP048209.1\|WP_162355206.1\|801951_802455_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355197.1\|793006_793687_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP048209.1\|WP_162355210.1\|806820_808113_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|226376
NZ_CP048209.1\|WP_162355198.1\|793783_795097_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP048209.1\|WP_162355205.1\|800569_801496_-\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP048209.1\|WP_162355202.1\|798205_798433_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355209.1\|806212_806440_-\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_CP048209.1\|WP_162355216.1\|813699_814581_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162355199.1\|795177_796059_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162355215.1\|812432_813503_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048209.1\|WP_162355201.1\|796882_798082_+\|PLP-dependent-transferase	unknown	unknown	gnl\|CDD\|223699
NZ_CP048209.1\|WP_162355213.1\|810140_811340_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP048209.1\|WP_162355214.1\|811461_812319_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162355212.1\|809411_809999_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|223272
NZ_CP048209.1\|WP_162355203.1\|798540_799539_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355211.1\|808283_809114_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355200.1\|796058_796886_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162355208.1\|805429_806155_-\|PspA/IM30-family-protein	unknown	unknown	gnl\|CDD\|224755

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355207.1\|803839_805243_+\|sialate-O-acetylesterase	gnl\|CDD\|377084	pfam03629, SASA, Carbohydrate esterase, sialic acid-specific acetylesterase. The catalytic triad of this esterase enzyme comprises residues Ser127, His403 and Asp391 in UniProtKB:P70665.	3.68232e-61
NZ_CP048209.1\|WP_162355204.1\|799560_800559_-\|BtrH-N-terminal-domain-containing-protein	gnl\|CDD\|379597	pfam14399, BtrH_N, Butirosin biosynthesis protein H, N-terminal. BtrH_N is the N-terminus of the acyl carrier protein:aminoglycoside acyltransferase BtrH. Alternatively it can be referred to as butirosin biosynthesis protein H. BtrH transfers the unique (S)-4-amino-2-hydroxybutyrate (AHBA) side chain, which protects the antibiotic butirosin from several common resistance mechanisms. Butirosin, an aminoglycoside antibiotic produced by Bacillus circulans, exhibits improved antibiotic properties over its parent molecule and retains bactericidal activity toward many aminoglycoside-resistant strains. Butirosin is unique in carrying the AHBA side-chain. BtrH transfers the AHBA from the acyl carrier protein BtrI to the parent aminoglycoside ribostamycin as a gamma-glutamylated dipeptide.	0.00169065
NZ_CP048209.1\|WP_162355214.1\|811461_812319_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.57091e-18
NZ_CP048209.1\|WP_162355197.1\|793006_793687_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	1.2367e-46
NZ_CP048209.1\|WP_162355210.1\|806820_808113_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|226376	COG3858, COG3858, Predicted glycosyl hydrolase [General function prediction only].	3.66009e-152
NZ_CP048209.1\|WP_162355198.1\|793783_795097_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.42217e-91
NZ_CP048209.1\|WP_162355205.1\|800569_801496_-\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	1.14579e-07
NZ_CP048209.1\|WP_162355208.1\|805429_806155_-\|PspA/IM30-family-protein	gnl\|CDD\|224755	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms].	2.85375e-20
NZ_CP048209.1\|WP_162355209.1\|806212_806440_-\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	2.03367e-17
NZ_CP048209.1\|WP_162355216.1\|813699_814581_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	9.20543e-28
NZ_CP048209.1\|WP_162355199.1\|795177_796059_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.19076e-79
NZ_CP048209.1\|WP_162355201.1\|796882_798082_+\|PLP-dependent-transferase	gnl\|CDD\|223699	COG0626, MetC, Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism].	4.95373e-146
NZ_CP048209.1\|WP_162355213.1\|810140_811340_-\|hypothetical-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.50448e-21
NZ_CP048209.1\|WP_162355212.1\|809411_809999_+\|guanylate-kinase	gnl\|CDD\|223272	COG0194, Gmk, Guanylate kinase [Nucleotide transport and metabolism].	3.11424e-29
NZ_CP048209.1\|WP_162355200.1\|796058_796886_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.61287e-79
NZ_CP048209.1\|WP_162355215.1\|812432_813503_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.11809e-83

>NZ_CP048209.1|WP_162355206.1|801951_802455_+|hypothetical-protein
MLSFEQKLSILESFPELDRKDVSLGRVNYQYEESLYEKKNVAFHLHPNGNGFVYAGLLSGYETDDKGFVNIRDYDEAALRELVAESIRSLSVREPEPAASSKAARAESGGRRKSGNASVWHGADKQTLTLKHEDDLWYVYAGANLEMVLETYEEAEQYLHEEGFFLV
>NZ_CP048209.1|WP_162355205.1|800569_801496_-|WYL-domain-containing-protein
MSNLHRIRWFDGQIREGNYPNSTALAGQFEISKRQAQRDIEYLAYSLSAPLLYVAKYRGYCYEDKTYALPLLYMTEEEQKILNYLARRYREYNYDGAPAVNRVANLLDRFAPNDAPPDFRLPVFDTNPRLIDHAERMSEAIAREAVVTLTYKEGAETDSLAVWPLKLLSRYNCDYVAVYSAAEHRRRMLRLDCIVGMTVTADRFDASGLEEREWSGDGGSERIAKKPFTAKLGLREPARGPSWNGYRMRSTDDPLVYLVEFHDTDAFLQQLWMSGSAWDTLLAPRWLIDKLERRCSAVLRQLAQSKER
>NZ_CP048209.1|WP_162355204.1|799560_800559_-|BtrH-N-terminal-domain-containing-protein
MSRVMLHDIRMKRESKSYADSLHAILTAAGLFQGPKYLLSGLSGLAFKFAVHRKLLPFSVSAYGQWGNEHDPAIENLGLFSISDGGRTRHPTFPQYQRDAVDWVKQSLDAGIGAIYWIPEFGVICGYDDEDEVFYVLDGRNEEPSVVLYDNLGLNFTPFWCCQIFGERVEIDLADMVLESLRLAIRDWETPHKTLPDTEIASGRLAFAFFRDGLAAGGYDERGAAYILTDYVYTRGEIADYLHDVRHALPVLGEAAALYAELRGALKAIDGCWTHGPDGKRIDPARIALLCDVMRQAEALEERAVAVFAVISAQFPDRKRSTVPRWGEHTPR
>NZ_CP048209.1|WP_162355203.1|798540_799539_-|hypothetical-protein
MGSRRLTGLALTRESLSYIDAMHAVLAHCGWFGASKAMLAGMTINGFRFSVDRKLSADSWHAYNWIAEHFLAADFIGVASSQKAGFSFAPTFPLYRKHAVAMIKEAIDNGIGAVFWKDDFVVAAGYDDEAGCLLYADGSGAAPEELKPLPYDEFGCNETPYWYYQTFDARIPLDELEIYRESFMQAIFKWETHDLMLSPSDYACGKQVYEAFIKFLDADDGCHAEARPLLWRYAAAKRDLADYAAELAKIWPDCLPIADCYAGVAERFAQLSAELSASDTGGSGPNADRMNADVPAVPLLREAAELENRAVQLMKSMMRERLHNRFGDISLR
>NZ_CP048209.1|WP_162355202.1|798205_798433_-|hypothetical-protein
MTKHRDGYDEMYNETSNTAAGINTPKNHEGYGPLDMISDAVEEIVDNVQHTFQHEDDDPLAHLHQHHAAYDRHSY
>NZ_CP048209.1|WP_162355201.1|796882_798082_+|PLP-dependent-transferase
MSSTDNNNQTIRNASLEAQFTHVAHDAVDTRHHGAIHVPVYQNSLFAFETYEAFEQAFQSLMDNHIYSRGNNPTVDYLEKKLAALEGAERAKCFASGMGAISAAIMSCIGAGDHIVCVDQAYGPTREFLSEYLNRFGVETTFIDGRSIESWRAAARPNTKLLYLESPTTLHFQLQDLRACAAFARSIGARTIIDNTWATPLYQNPLALGVDLVVHSVTKYIGGHSDCVGGVVLGSRELVDAVGNKEYMLFGAIMTPQTAALVAKGLRTLPLRMQRHEASGMAVAEHVRSLPFVHQVNHPGMASHPQHELAASQMSGSSSLFSFRTSAPPATMKLWADKLQYFRIGVSWGGFESLVTVNAAGKQPEDGSIVRLYIGLESPQDLIGDIDQAAEALSLGAES
>NZ_CP048209.1|WP_162355200.1|796058_796886_+|carbohydrate-ABC-transporter-permease
MKQRLGTAFKIVFLAIYLLLMVFPLYWIVITSFKPQKDIFSFPLRYWPKTFTMDNYINIFKISKFQIYIGNSLIVAILAALIVIVIAVLSAYVLARFKFRGHGQIMLAFFLTQMLPGFIALAPLYLMMSHMNLLNTRFSLVLMYTVGLIPFSTIMLRGFFQRIPSSLEEAAMIDGCSRWSALLRVIIPVMLPGIASTFIFAFVQNWNELFLAAMFIDDEKLKTLPVAMNAFILKFDVDWGSMSAGVVLSVIPTVVIFAFAQRFIVEGLTQGAEKG
>NZ_CP048209.1|WP_162355199.1|795177_796059_+|sugar-ABC-transporter-permease
MRKHTIFILSGLLPALLLVLAFTYYPFLKGIIMAFQDYKLFNLRNVKFVGFDNFKAAFHDPKFFTALKNSGYWVFFSLVFQFLFGLALALLLKKPFRGRGIFQGFAFYSWALSGFLIGMIWKWMFNSQIGVINDLLLRLGIIHERIGFLSDPKWAMISVIIANVWYGIAFFAIMLLAALQSVPSELYEAADMDGATGIRKLWNVTLPYILPTIIATTLLRAIWIFNDPTIIYGLTNGGPAGSTHILSSMMLDKIIYAGDYGAASAIGVIMIALLLLYTIFFLAVTKAEKVGDF
>NZ_CP048209.1|WP_162355198.1|793783_795097_+|sugar-ABC-transporter-substrate-binding-protein
MTNRKKVSALLLCGALSAGLLAGCGSTKDSSNENADGGKVTLRMIESLTSPKRTQLIQASISKFEAANPNIKVDLISPPFDQADNKIRTMLGAKENIDVLEVRDLTVAEFVNNGFVEPLNAYADKWSDYSTVSEISKSLGSIGDKLYFIPNGLYERQLFYRADWFKEQGLTPPKTWDELFETAKKLTDPSKNRYGFSFRGGAGSNGTTDAMVLAFNGDNVNLEDSMFTKDGKTVFSTPEAKAAIELYQKLYKEASPPDSVNWGFQEQVQAFTSGVTGMLLQDPDVIQSLQEKMAEGTWATAPLQAGPTGKALLAAGGAGWGIAANSTHKEAAWKLISFLSSPEENTEFSKAYGLIPIHTSAAEDDFFKSGPYKTLLDMTQAPDTFLNFKPPFAYPGTGQWGQVEMESGQALLLGQASVDDTLKKWDSYWADQKAQQK
>NZ_CP048209.1|WP_162355197.1|793006_793687_+|FadR-family-transcriptional-regulator
MRKIQKVLVHEQVSQEIQNYIQEKELSEGDKLPSVEEMTHMFGVGRSSLREALRYLEAMDIIQVENGRGIFVRDVNTYRFTGKVKIEQERVFLLHTLEVRRALEGQAVFLASKRITDNQVAEIEACLYEYRKLKEAGQDTSQIDLAFHRHIIKAAGNPVLETVLDSFSGLYEKFFNDPLGDKQLFDETYPFHITMFDAIKVHDTEQAMEEFYKMMDCIEAKIKGVQ
>NZ_CP048209.1|WP_162355207.1|803839_805243_+|sialate-O-acetylesterase
MTTPIGVMIEEGPQAWEIVQQRGGSAAIALVGSWKLPDGGGAKGQVYARVVREDSGEEVVTWTPAETDPSAGTWRLRLERVPAGGLYRLETSLQADGNTAMEWNVRGDMIHHWGVGDLWVIAGQSNAAGYGKGPVVDPPEFGVHLLRNSGRWDLATHPFNESTRTIHTENRETANPGHSPFLAFARLVKRETGWPIGLVQTALGGSPLSKWNPAEDGELYRMMRGVVESVGGSVRGVLWYQGCSDCSPELSATYLDRFRHMVDSWRADFGDEALPVLTVQLNRFTGADTTPEDDASWGTVREQQRRAAREIPHVTVIPAIDCPLSDEIHNSPAGNLLIGERMARAALAAVYGQDVHFRAPEIREARYIPADDAGTPSIELQFEHVKGYLLPTGQLNRLFTVQDAEGTADIAACTISGPASVTLKLARRLHGQAYVHGAFERNPIVYLPLDSATYMPLLAFYKFPVAE
>NZ_CP048209.1|WP_162355208.1|805429_806155_-|PspA/IM30-family-protein
MGILNRLFNITQAAANELLDKMEDPAMMMNQYIRTSQEEIANVQHELLKQEALAKGLGQQAAEASALAEHCEARALEAMRAGQEAHAREALTAKLHHEEKAREYGTWHDNAKRQAAELAIRLETAKAELPQLLKKRDELVSRIHQAQRQSRSVMPSFSAGPSILEGGNAARGFQRMEEKIAQWEARLAVRGPYGAQGYGSGSVYGSAAGGADAAADANAGKSSLVDEQLELLRKKLPTDNE
>NZ_CP048209.1|WP_162355209.1|806212_806440_-|PspC-domain-containing-protein
MKKLYRSTMDRKLTGLAGGIGQWFGIDPTIVRLVLLVSGVFSLGTTLLLYIVASLLVPKAPFEVLSPDPSFRYYG
>NZ_CP048209.1|WP_162355210.1|806820_808113_-|LysM-peptidoglycan-binding-domain-containing-protein
MQIHVVQAGQTLYRLSQAYGIPVDAITSANEISPAHTLVIGQALVIPIVGQYYYVRAGDTLTSIASRFGTTAARLADVNELDSNAALQAGTRLYIPPPPKRQAYVNAYIDARGTTLSPALTEAARQAAPLLTYLAPSSFRIQRDGTLALPPLGDLESIATKQRTAMMMTVTNLENDQFSAELGHLLLSDASLQDKVIANILETAKNLHYRDIHFDIEHLLPSDREAYNRFLRKAVVPIHAAGLTMSTALAPKTSAAQEGAWYSAHDYKAHGEIADFVIIMTYEWGYSGGPPMPVSPIGPVRNVLEYALTEMPADKILMGQNLYGYDWTLPYVPGGAYAKAISPQAAISLARERNAEILYDAAAQAPHFTYWDDNGKEHRVWFEDARSIQAKFNLMKELKLRGISYWKLGLSFPQNWLLLEDNFHIVKLLP
>NZ_CP048209.1|WP_162355211.1|808283_809114_-|hypothetical-protein
MFHSMRLKPFSSMLLALFAFMLLVSGTASAASVSLSNAAQTALAKHIAAAPADMKNKLNAQSSSLQSYQKQETLLDEQYKTLHSNNGKALDALNKRIKLVDAEKLKRMTNELAAQRGRYKPLFDQYTAINKNVSNARSLKLKPLVSLLSGQAEMLKPAVQLARADIRIREQALSEAKAATAKKIKALKASLAPIDSLRAQSKNALSSVSGMKKGIPGTVKTLNACVKSGSFSGTLQALNALASVSQSIVANKSRVIEYENKIKAIIAQVGAQTPAG
>NZ_CP048209.1|WP_162355212.1|809411_809999_+|guanylate-kinase
MNVESDRKLIFVFTGPDGSGRKTVADSVGATLGIAKVLSYATRKPRPGEVNGQDYHFITPELYEQFERAGDFIESISIGGSRYGVRGEDIEQSLRQGGSVYLIVNPEGAQLLKDRYGDQAVRLFIYADRRTVQERQQESGLDAAIVQAKMDQYETAIAYQPNCEHAFENYDLAHTVFDISNTLEHYLQRNLVERD
>NZ_CP048209.1|WP_162355213.1|810140_811340_-|hypothetical-protein
MKKITALLVSVILLLAFSGLASAASAKPPISVWVGDREVAFDAPPMIANGTTYVEFKALFNVLGFTVAYDAKSKTITGKSASATLTLNAKTGAATVNGQASAKPVQLIVQDGRTLVPLRFVGESTGLLVDWNASAQTIKISAKGPSPADAKELQAYLAQMDAYDTAGDQAGILSLIDPASPFYAAIKTEGAPQEGDPVVRTTSKLQSIVSFDAAAAVIVISQHSAKVSGGFYLDNDCVMQLKLVRGPKNQWLLSDLALQQMNYVNTDDALSREADVPADEKAAILAVIDQETQASNDENMDAYKAVIDPDAPGIAEALKAAQTAMDTYDLKYTNEQVRIVDYSGDEAIVYIVQTVEKTKGPAFQDFRVSVVSTLHKTADGKWLDEGQGKIIKVEALPAV
>NZ_CP048209.1|WP_162355214.1|811461_812319_-|AraC-family-transcriptional-regulator
MPTYMDNMISPLPIRLYDNVIDLKKLRVQSLLIRYAGHLPGRIQQRTDASFEQWAFVYIGAGRGYYQAGDGARQTVEAGTVFCLYPGEVFQYGPEEGGFWDEYYFTLEGPRVQEWLASWYEQPETVKFVGTDESFFSKIELIFRLLDSAVPANQDRAALALEALLFDMSLRFRQPETSSRTMFVHQLLDDVTSAVYGKPDSAAIAARHHISVPTMRRIVHDYTGYPLGEFMHRLKVAEAKKLLLNTDKTVMEIAGLLGYSDMFYFSRLFKKYTDAAPTTYRARMG
>NZ_CP048209.1|WP_162355215.1|812432_813503_+|Gfo/Idh/MocA-family-oxidoreductase
MENTGKKLQVGVIGNGSISGLHLEAYRQNPDAELAAVCDLNEERAKAAAEKYGAKRVYTNYRDLLADPEIEAVSICTWNDSHAEISIAALEAGKHVLCEKPMCKTVEDAERVQDAVRRSGKLLQVGFVRRYAGSVDVLKRFIDAGELGEIYYAKATCLRRLGNPGGWFSDKSRSGGGPLIDLGVHIIDICWYLMGRPKVKSISGNTYRKLGNRAHIQNLSFYKAADYDASRNDVEDAANAVIRFENGASLIVDVSFTLHAVKDEISVKLYGDKGGAEVEPALVVMSEKHNTIVNVTPQIDHTTFDANEAFGREITHFVNSCLGRCETLSPVEDGLEVTRMLSAIYESAATGKEIQF
>NZ_CP048209.1|WP_162355216.1|813699_814581_+|sugar-phosphate-isomerase/epimerase
MATPLNNKIGVIVDSFGIGVRQGLLKAKEVGAEGVQIYAVSGEMDPANLDAAARRELRGYIDGLGLEISALCGDLGGHGFQDAAANAAKIEKSKRILDLAVELGTSVVTTHIGIVPDDRNGAIYAAMQRACEELSTYAKSMNAYFAIETGPEPAAHLKSFLDTLSTNGVSVNFDPANMIMVTGDDPVQGVITLKDYIVHTHVKDGRRYRAVDPRQVYGFLGYDEMSHEHIAEMAAGGADFAELPLGEGDVDFDAYFAALQSIGYKGYLTIEREVGEQPEQDIRKAVEFIKRYR

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Crispr_ID: NZ_CP048209_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_4

918586-918659

Orphan

Consensus_repeat	Method
GGAAATGGCGAAAGAGTTGTACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_4

>merge|NZ_CP048209|4|918586-918659|CRISPRCasFinder
GGAAATGGCGAAAGAGTTGTACCCGGTACAATACATGGCCGCCAATTGGGTGGAAATGGCGAAAGAGTTGTACC

>NZ_CP048209|4|3|918586-918659|CRISPRCasFinder
GGAAATGGCGAAAGAGTTGTACC	CGGTACAATACATGGCCGCCAATTGGGT
GGAAATGGCGAAAGAGTTGTACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355300.1\|924896_925328_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_CP048209.1\|WP_162355291.1\|903977_904178_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355296.1\|918769_919969_+\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|181072
NZ_CP048209.1\|WP_162355304.1\|928188_928833_+\|SOS-response-associated-peptidase	unknown	unknown	gnl\|CDD\|376837
NZ_CP048209.1\|WP_162360281.1\|913650_915861_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP048209.1\|WP_162355295.1\|912429_913296_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP048209.1\|WP_162355297.1\|920409_922218_+\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173850
NZ_CP048209.1\|WP_162355302.1\|926150_926894_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP048209.1\|WP_162355292.1\|904298_904910_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP048209.1\|WP_162355290.1\|903516_903942_+\|metallothiol-transferase-FosB	unknown	unknown	gnl\|CDD\|179740
NZ_CP048209.1\|WP_162360282.1\|916200_918558_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP048209.1\|WP_162355293.1\|905254_909469_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227779
NZ_CP048209.1\|WP_162355301.1\|925440_925614_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355299.1\|923169_924900_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|180666
NZ_CP048209.1\|WP_162355289.1\|903192_903504_+\|Dabb-family-protein	unknown	unknown	gnl\|CDD\|369566
NZ_CP048209.1\|WP_162355294.1\|911618_911906_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_161703939.1\|925806_925995_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355298.1\|922220_922853_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355303.1\|927115_928054_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP048209.1\|WP_162360280.1\|909965_910985_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355296.1\|918769_919969_+\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|181072	PRK07661, PRK07661, acetyl-CoA C-acetyltransferase.	0
NZ_CP048209.1\|WP_162355304.1\|928188_928833_+\|SOS-response-associated-peptidase	gnl\|CDD\|376837	pfam02586, SRAP, SOS response associated peptidase (SRAP). The SRAP family functions as a DNA-associated autoproteolytic switch that recruits diverse repair enzymes onto DNA damage. We propose that the human protein Q96FZ2:UniProtKB, the eukaryotic member of the SRAP family, which has been recently shown to bind specifically to DNA with 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxycytosine, is a sensor for these oxidized bases generated by the TET (tetrahedral aminopeptidase of the M42 family) enzymes from methylcytosine. Hence, its autoproteolytic activity might help it act as a switch that recruits DNA repair enzymes to remove these oxidized methylcytosine species as part of the DNA demethylation pathway downstream of the TET enzymes.	2.376e-45
NZ_CP048209.1\|WP_162360281.1\|913650_915861_+\|hypothetical-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	5.63419e-74
NZ_CP048209.1\|WP_162355295.1\|912429_913296_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.31937e-79
NZ_CP048209.1\|WP_162355297.1\|920409_922218_+\|acyl-CoA-dehydrogenase	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	3.86172e-174
NZ_CP048209.1\|WP_162355302.1\|926150_926894_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	4.0281e-124
NZ_CP048209.1\|WP_162355299.1\|923169_924900_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|180666	PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP048209.1\|WP_162355292.1\|904298_904910_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.18238e-23
NZ_CP048209.1\|WP_162355290.1\|903516_903942_+\|metallothiol-transferase-FosB	gnl\|CDD\|179740	PRK04101, PRK04101, metallothiol transferase FosB.	2.994e-91
NZ_CP048209.1\|WP_162360282.1\|916200_918558_+\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	4.92335e-70
NZ_CP048209.1\|WP_162355293.1\|905254_909469_+\|hypothetical-protein	gnl\|CDD\|227779	COG5492, COG5492, Bacterial surface proteins containing Ig-like domains [Cell motility and secretion].	6.53157e-11
NZ_CP048209.1\|WP_162355289.1\|903192_903504_+\|Dabb-family-protein	gnl\|CDD\|369566	pfam07876, Dabb, Stress responsive A/B Barrel Domain. The function of this family is unknown, but it is upregulated in response to salt stress in Populus balsamifera. It is also found at the C-terminus of an fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus. Arthrobacter nicotinovorans ORF106 is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an a/b barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.	5.19577e-20
NZ_CP048209.1\|WP_162355300.1\|924896_925328_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	3.12173e-28
NZ_CP048209.1\|WP_162355303.1\|927115_928054_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	4.41493e-23
NZ_CP048209.1\|WP_162360280.1\|909965_910985_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.45641e-114

>NZ_CP048209.1|WP_162360282.1|916200_918558_+|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MGAGIAAHLANAGMQVLLLDVPPSELTEQEARAGATLQDRAVRNRLAAASIARLAKSEPPALYDASFIGRITPGNLEDDLGKLGKAEWIVEAVVERLDVKRSVFARVETVLKPGTLVSSNTSGLSVAAMAEGRGETFRQQFAVTHFFNPPRHMKLVELVPGPDTAPDTLTRLRAACEGQLGKGVVLAKDTPNFIANRIGTYGMLTTIEAMRSFGLGVDEVDALTGPAMGRPKTATFRMLDLVGLDTLLHVVDNVRERSDDEAERAAFARPPELEALVAKGWLGEKAGGGFYRKIKRPGGGSDIETLQLDTMTYAPRRSVNSPVIEAAKTAKGAAAKVKALLFTDTSDRHALFAWQAIKTVLLYSARQLGVVADSVTDIDRALVWGFNWELGPFELWDAIGLERSVQRMRAEGDDIPHWVERWLAAGNRSFYKQEGLRWFYVRGGEYALQEEDPDVISLEAIRRSGRVVLGNAGASLLDLGDEVAGLVFHSPNNAIGGDILTAIRQSAAEVSRNWRGLVIANEGRHFCVGANLMMLLLEAQNGDFDEIDDIISLFQNSMLTLKRLDRPVVAAPHRMTLGGGVEACLPADRIVFSAETYFGLVETGVGLIPAGGGCKEAAALADARTGAGGDVQSQLNALFETIAMGRTSTSGYDVGRIGFMRPHDRVIMRGETRAAEAKRTVLAMDREGYASPAEKRVRVAGREGRAVLQLAVENMRLAGQASPHDVRIGRKLAHVLAGGDAPPGAEVSEQYLLDLEREAFLSLCGEPLTQARMRHMLTTGKPLRN
>NZ_CP048209.1|WP_162360281.1|913650_915861_+|hypothetical-protein
MLLGRRAQRKPPPPLDPADPENDQSDDMLGISSFTTNAELASQAASWFERPAEWAVQVFGHRKLLKDLRSGLMHLVLFYGFIVLQFGAADIIWKGLTDSALPYPAYHGFVLTQEITVTLVLLAIVYGTFRRYVERLKRLKRGWKPSIVLWFIGGLMATVLLTQAFDRLKESAAASEGAAGSLYASYAPVSSSLADGFRAIGFSPDAGRVLYEIFWWLHLAVLLGFLVYVPQSKHFHIFTAPVNLWLRRRTPPGRLAPLDLEDEEAESFGVGAVEQFTQKQLLDLYACVECGRCTNVCPTASTGKLLSPMHLIVKLRDHLTEKGAAITSKSPWVPDLNRGAPAGAHAMSVGAVPIWTGGSSATTTIEPTMTAQKQAWHVQADTAVTDLALIGDVMTESELWACTTCRNCEDQCPVGNEHVDKIIDLRRYLVLTEGRVPAEAQRAMQNIERQGNPWGLPRTERAAWIAAYEAAVPDAPPVRTMREAAGRGEQPELLLWAGTMGAYDQRSRKVLFAVVRLLQQAGVPFAVLGGEEKNSGDTARRLGNELLFQTLCAENVATLQRYGIRRIVTICPHTFNALKNEYADFGLERTVKVEHHTMLLARLVEDGSLVPVVPLRERVVYHDSCYLGRYNGVYDAPRALLRAIPGVRLLEMERNRANGLCCGAGGGLMWMEERGGVRVNEARTAQALETSPTVIGSACPYCLTMMEDGIKLHDAESGVRARDVAELLAESVFGDG
>NZ_CP048209.1|WP_162355295.1|912429_913296_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MQLVVLIKQTFDTEEKIELVGGAVAEDGVKFIMNPYDEYALEEALRLREAHGGSVTVVSCGGGRAAETLRTALAMGADEAVLIAQDGLPDDGSAVAAALSAAVRDLQPDLVLAGLFAVDRGAGSVALQVAERLGLPSASAVLKLTVEDGGAGAGDASNGRNSGESGGPSSPSGAAWGGGSGKFAVAERDTEWGVETVQVPLPALVTAQQGLNEPRYPSLPGIMKAKRKPLRQLDAAALGLGAADFAPRTERVALLPPPVRAAGRKLSGTPAEQADQLAALLQSEAKLF
>NZ_CP048209.1|WP_162355294.1|911618_911906_-|hypothetical-protein
MTDLFVDIPACGQLFSPMTGRFVDIPAYGQLFSPMTGRFVDIPAYGQLFSPMTGRFVDIPAYGQLFSPMTVFLCAGLRIPASGKDFAVFMTVCGG
>NZ_CP048209.1|WP_162360280.1|909965_910985_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MTDTTHATALVYAECLDGKLRRVALEALGAARQLAGDGSVHAVLAGGGPGAALREAAAELAARGAGVVHVVDDPALAGYAPEAYAAAIGAAIAAARPSLIVLGHTAAGRELAPRVAASICGGHVADVTAIDLPDEGGAAALFTRPLYAGKAFEQRRFLPGAPQVVTVRPNNLPIAEPVAPGSEGVIAPLPYKAPPLWTVVRGIARKTGGTIDLAEADIIVAGGRGVRSAEGFAPLQALADVLGGAVGASRGACDAGYCDYALQIGQTGKTVTPKLYIACGISGAIQHLAGMSQSRVIVAINKDPDAPIFGVADYGIVGDLFEVVPLLTARFDTLLNQTG
>NZ_CP048209.1|WP_162355293.1|905254_909469_+|hypothetical-protein
MRTSKQRLLSMVMSGVIAAGSFGAVIPAAADASAITAGTPYDATGYHVEIPHVVINQYYGSGVSDGGAVDYGFIELYNPTAEAIDLGKWSIQYSDRMDQYVPETETADAILPLTGPTGPWEKLNLSGSIPAYGSYLIRASASLKPKIKLNVKAGDIDFLRTPANTFQNKGMKVVLMSSQDLLDPADINPSVTKPEGFVDMLGAAGNDAGSTIDGYEGADYPREDGGPSKNIALRRANSVDTDDNKNDFELIDYKSNAGAPATYGPHNSGEGSWNEPAPPVQTPLAITTASLPGATQGASYAATVAVTGGTAPYTYSATGLPEGLSINTSTGVITGTLAADAPPSNTVVVTVTDSATPANTSTQSFPFNVSAKIQDTVAITKLGSFIAGVPNGDGGVAEIVKYNPDNHKFYSVNGSSAPATLDIVSLDSNGAPIQDANRINIETAVAEHLPGFVYGDFTSVDIDTGHDLVYAAIQEHDYAKNGAILVFDYDGHFVKSYEAGVQPDMIKVTKDGRYVLTADEAEGRGDVDPEGSVTIADTVAGTVKHVKFDDPSVIADNVHLRGTPDSSHVIAGPAASKAAAVYDLEPEYIALSADESTAYVSLQEGNAIGTIDIAQGTVTSVKGLGYKDLNDPANALDLVKDNAIDFENVPFKGMYMPDGIDTYTTENGDTYLFTANEGDSTDWAGVRTNVSTIGEMKGKLDPASAAAQFLATTARYDGVEIPSDMGPDGIYLFGARSFSIWNPATMEQVYDSHNDFEKITAQRLPAYFNSDHKDVSFDKRSPKKGPEPEYVKVGKVGSKAFAFIGLERISGIMTYDVTDPAHPVFANYINTRDFNAAGAGKVPPQTDSGPEGIDFIPAADSPTGLPLILVANEVGGTVTVLQMNVTKVTLDQSALSLQVGDSAKKLAASVTAAGGSAATVTWTSSKPSVATVDADGNVTAVGAGTAVITATSADGYATAQATVTVTARPSTPSNPSGPTGSGPTDPVTTDPGQTGGNGTLPAAGGTVTTEVATVTDSSGQATATVSSEQIAQALSSLNAGGAKQVEIKAVAGANAKKNTVTLPSTAINQLAGSKADSLKIDSGLAQVAFDRKALGTISGAAPSGNVDISAAKVELSELTANLPASAKEEVLKTIGSRPVYSFTVSSNGSKVTDFKGGTVNISVPYTPAAGENGSAIVMYYLADNGDIVMVPQTNYDPATGMLTFSVKHFSNYAVGYNEVKFGDIAASFAKDQIVYLAARTIIKGTDEGMYSPKANVTRADFTLILARAAGADLSAYQGSAFGDVGADAYYAQSVAWAAAKGIASGVSEGRFNPNATITREQMVAMIARYAAAMGYKLPATAKPVAFADASSISAYAKQAAAAVQQAGVINGITSGSQTLFAPKQFATREETAKMIAVLFQLMTK
>NZ_CP048209.1|WP_162355292.1|904298_904910_+|GNAT-family-N-acetyltransferase
MRNAFFEQDIVLENPIVRVVPFDASYEDGLRRIIFDKEITRFTQEHILSDEDLKRYIASTEACRANGSGYPFIVIDKASGQVAGATRFGNLVFPSKRLEIGWTWYGKAYRGTGINKAVKFELLRYAFETLGFNRVQFSVDLENVRSQKAVLKLGAKQEGIFRSNYENASGEPRDDVYFSIIKPEWPDVKSGVFEAFVSAGRFT
>NZ_CP048209.1|WP_162355291.1|903977_904178_+|hypothetical-protein
MRTDAMDAMHAEEERGERPSTAGLRARKKASPLAIVLVLAVIAAIIVTSFALAHVLIDAAFRKLAD
>NZ_CP048209.1|WP_162355290.1|903516_903942_+|metallothiol-transferase-FosB
MKPGSINHLLFSVSDLERSIAFYRDVFGAKLLVQGRSLAYFDLNGLWLALNAEPDVPRHEIRQSYTHIAFTVEDEEFDDAVRRLREAGAEILPGRERDERDKRSVYFADPDGHKFEWHTGSLQDRLSYYKAEKPHMLFYEE
>NZ_CP048209.1|WP_162355289.1|903192_903504_+|Dabb-family-protein
MEQTSIQHMVIFNLKHEAGSEAAEQFLRDGERLLSSIPVVNRFSVFKQVSPKNDYDYGFSMIFNSQADYEAYNAHPVHVDFVDNRWVPEVSRFLEIDFKAYGA
>NZ_CP048209.1|WP_162355296.1|918769_919969_+|acetyl-CoA-C-acyltransferase
MTATKHPRDAVIVSAVRTAVGKARKGSLADTRAEDLGRAVLRAAVDRVPGLNDADVEDVIIGCAMPEGEQGLNFARIMTLYAGFPVTTPAVTVNRFCASGLQAIAYAAERVRLGEADVVLAGGVESMSHVPMTGFKLSPHPGIADSMPEAYMGMGHTAEEVARRYGISREAQDAFAAESHRKAAQAIAEGRFRDEIVPLHIQREGIDDNGRPWKKPYTFEQDEGVRADTTPEVLAKLKPSFAREGTVTAGNASQMSDGAAAVVVMSRERAERLGIRPLAQFRAYCVAGVAPEVMGIGPIEAIPKALARAKLTLDQVRLFELNEAFAAQCLPIIRELGIDPEIVNVNGGAIALGHPLGCTGTKLSVSLIHELRRRGGGTGIVSMCVGGGMGAAGVFSVEA
>NZ_CP048209.1|WP_162355297.1|920409_922218_+|acyl-CoA-dehydrogenase
MAQNKGWGGRFVIEDMAPEEVVTPEDFTEEQVMIGEAARAFLEGEIRPRDAEIEALDYKLTVELMRKAGELGLLGADVPEAYGGLGLDKVSSTLLAETLAEASSFALSVGAHVGIGTLPIVFFGTPGQKSKYLPDLSTGKRIAAYCLTEPSSGSDALGAKTTARLNAEGTHYKLNGSKLYITNSGFADVFIVYAKVNGDHFTAFIVERGLPGFSIGPEEHKMGIKGSSTCPIFFDDTPVPVENVLGEVGKGHLIAFNILNIGRFKLAAACVGGAKETIGLAAKYANGRKQFGRPIASFPLIGAKLADMNIAAYVTESMVYRTAGWIDEMLQSTEAQGGDASQAGARAAKAISEYALECSINKVFATEALDYVADEAVQIHGGYGYIKEYKVERIYRDSRINRIFEGTNEINRMLIPGTLMKKALKGDLPLLRKARALQAELLQPMPLPAFDEPLAKETYRIGQAKRTFLAVGGLAVQKYGLALEQQQEVLCLLADMMIQTFAMESAALRTRKMLFRAAGASADAAASARIRNATDMTVVFVQEAMERVERYAKTALSALETGDSLQTQLAVLKKLLRAPLDDVISLKRGIAARVIRSQQYTL
>NZ_CP048209.1|WP_162355298.1|922220_922853_+|hypothetical-protein
MQATGCLAKQRLRSAVCARLYAFDQLYVFGSGRREAGANGCCSLKIGTRHALAADFCFQGSLPAVSAMACSVRPLFFVERPPRSRRKSCQSGNFSHRKPAITPKKLPIGQLFAPQTGDNAEKVAFRAAFRAANRRPRRKSCLSGSFSRRRPANTPKKLPVQQLSAPQTGDHAEKAANRAAFHRRPATTPKKLPFGQLFAPQTGDNAEKVA
>NZ_CP048209.1|WP_162355299.1|923169_924900_+|long-chain-fatty-acid--CoA-ligase
MDQPQASPWLRNYPGEVAPEAEIPDLAIGDLLLQAAAKYPANEALRFFGKRTTYKELLAAAQRMAAGLQAAGVGKGDRVAIMLPNCPQTVVSYFGVLLAGAVVVMTNPLYVERELEHQLKDSGAVAIVTLDMLYPRLARVRGDVPEEGPVPQLRKVIVTSIQDGLPFPKNLLYPFKQYRSGQQPNVPYGMDGVTRYASFLTKAPKLPSEVRIDPAEVALLQYTGGTTGVAKGVMLTHRSMLANAAQCAAWFYRMQEGKERFLAALPLFHVFGLTVIMNLSVFKAGSIVLLPRFEIATVLQTIRDEKPSIFPGAPTMYVALLNHPDVKKYDLSSIQVCISGSAPLPLEVQTQFERLSGGRLIEGYGLTEAAPVTHANPLWTKRKIGTIGLPLPGTQAKVVDMVTGEELPPGSIGELLIKGPQVMQGYWNKPEATAAALQDGWLRTGDLAQIDRDGFFTIVDRIKDIIIAGGFNIYPREVEEVLYEHPGVRDAAVIGVKDPYRGETVKAFIVLRKDVNVSSMQLDRWCRERLAVFKVPHLYEFRDELPMTMIGKVLRRKLQEEEERAASGNDGGGEAT
>NZ_CP048209.1|WP_162355300.1|924896_925328_+|PaaI-family-thioesterase
MTDERKDRPRDAKQELAALEAAARPTFWGFLGCELVAAEEGRAAIALQVRPEHLNLAGIVHGGVLASLLDNAMGLVAILACPGDKTVTSGLNVHYLASSSEGLLTCEAALVFRSRRTLTLEGRITDNKGELLVWGSGTFRRVT
>NZ_CP048209.1|WP_162355301.1|925440_925614_+|hypothetical-protein
MVSPWITTAVILFGIIVAIVGVVAYLRMYKSSAWSAATTRSQEWDNTGADSTDTDNN
>NZ_CP048209.1|WP_161703939.1|925806_925995_+|hypothetical-protein
MAKRSHNEVKESLVELTRIFQPKDSRKFVRDYIRKYRIMGGYEEELTLLVEHEMGRLRSSVS
>NZ_CP048209.1|WP_162355302.1|926150_926894_+|type-I-methionyl-aminopeptidase
MIQYKTNDEIEQIRKAGRVVAGCHREIARRLQPGVTTLELDRFAEAYMRACGAKPAQKGYKSYPYATCASVGDVVCHGFPRDVPLREGEIVTIDMVADLDGWMADSAWTYAVGRIAPDLERLLKATKYALYQGIAQAAAGKRLGDIGAAVQAVAERERYAIVEAFIGHGIGRRMHEDPQVHHTGKAGSGKKLREGMVITIEPIFVTGQPHITIDADGWTARTFDGSWGAQFEHTVAVTSGGPVILTE
>NZ_CP048209.1|WP_162355303.1|927115_928054_-|AraC-family-transcriptional-regulator
MRENEPAPKAVRVPAPFARGERLLPYASLADNPLPVYVNRVRETFDLRMHAHDFIEICLVAEGAGFHYLETEQIAVARGDLFFIPIGLSHVFRPAAKGQPLVLYNCVVTADRLNMLLQAVQAEPELAAFYAARSAGKGWFQLRDRGEEAQRLFHRLHREFTERRPGCSAALSALTAELLVLLYRHGGEGEPRQPVPAASTEDVASMGELLAYIRGNCAEDLHAAAMAAKLGIGERQFQRSFKKAVGVTFLDYVQSARIDLGCRLLLETADKISAVAARSGYQDTKFFNRLFKKKTGVTPRQYRAAGKSSEER
>NZ_CP048209.1|WP_162355304.1|928188_928833_+|SOS-response-associated-peptidase
MCQAIAITAASSELTERFELDNVLFHTSSRSEIQPTESISAIIHHKDERVLDEFRWGMVPYWAKDSVRMDSLKLFEKPIYERIANKQRCIIPCNGFYVSRTEGKVVHRVKIAMRSGMFAIAGLYDVFRPASGEEMRTCTMLMTKANGLIAPYQPQMPAILEPEDVSAWLTRGSRTPFQLTNMLRMMESVRMIAIPVSPTGEADMEFEAPRTEWV

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Crispr_ID: NZ_CP048209_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_5

1269415-1269522

Orphan

Consensus_repeat	Method
TTCCCGCGCAAGCCGAAAAGTGCCGGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_5

>merge|NZ_CP048209|5|1269415-1269522|CRISPRCasFinder
CTGCCGCGCAAGCCGCAAAGTTCCCGCGCAAGCCGAAAAGTGCCGGGCAAGCCAAAAAGTTCCCACGCAAACCGCATAATTCCCGCGCAAGCCAAAAAGTGCCGGGCA

>NZ_CP048209|5|4|1269415-1269522|CRISPRCasFinder
CTGCCGCGCAAGCCGCAAAGTTCCCGCGC	AAGCCGAAAAGTGCCGGGCAAGCCAAAAAGTTCCCACGCAAACCGCATAA
TTCCCGCGCAAGCCAAAAAGTGCCGGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355517.1\|1256073_1257708_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|381091
NZ_CP048209.1\|WP_162355530.1\|1279667_1281710_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP048209.1\|WP_162355528.1\|1272404_1273229_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162355525.1\|1269591_1270395_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP048209.1\|WP_162355519.1\|1259507_1260392_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162360306.1\|1276385_1276463_+\|potassium-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360307.1\|1276616_1278290_+\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|377138
NZ_CP048209.1\|WP_162355521.1\|1262819_1263872_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048209.1\|WP_162360303.1\|1258544_1259495_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP048209.1\|WP_162355524.1\|1266873_1268619_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477
NZ_CP048209.1\|WP_162355526.1\|1270541_1271294_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162355520.1\|1260529_1262194_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378792
NZ_CP048209.1\|WP_162355523.1\|1265012_1266242_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|179997
NZ_CP048209.1\|WP_162355529.1\|1273516_1274629_-\|NADH:flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240095
NZ_CP048209.1\|WP_162355531.1\|1281738_1282305_+\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP048209.1\|WP_162355522.1\|1264624_1264927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355518.1\|1257760_1258309_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360305.1\|1275779_1276172_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360304.1\|1268849_1269176_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP048209.1\|WP_162355527.1\|1271415_1272276_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355517.1\|1256073_1257708_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.64633e-37
NZ_CP048209.1\|WP_162355528.1\|1272404_1273229_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	5.494e-14
NZ_CP048209.1\|WP_162355525.1\|1269591_1270395_-\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	5.49149e-91
NZ_CP048209.1\|WP_162355519.1\|1259507_1260392_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.92348e-61
NZ_CP048209.1\|WP_162355531.1\|1281738_1282305_+\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	2.51128e-85
NZ_CP048209.1\|WP_162360307.1\|1276616_1278290_+\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|377138	pfam03814, KdpA, Potassium-transporting ATPase A subunit.	0
NZ_CP048209.1\|WP_162355521.1\|1262819_1263872_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.09587e-69
NZ_CP048209.1\|WP_162360303.1\|1258544_1259495_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.62012e-108
NZ_CP048209.1\|WP_162355524.1\|1266873_1268619_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP048209.1\|WP_162360304.1\|1268849_1269176_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	3.16432e-30
NZ_CP048209.1\|WP_162355520.1\|1260529_1262194_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	6.24322e-46
NZ_CP048209.1\|WP_162355523.1\|1265012_1266242_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	1.59217e-179
NZ_CP048209.1\|WP_162355529.1\|1273516_1274629_-\|NADH:flavin-oxidoreductase	gnl\|CDD\|240095	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP048209.1\|WP_162355530.1\|1279667_1281710_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP048209.1\|WP_162355526.1\|1270541_1271294_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.59882e-29
NZ_CP048209.1\|WP_162355527.1\|1271415_1272276_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.84637e-31

>NZ_CP048209.1|WP_162360304.1|1268849_1269176_+|general-stress-protein
MKPSVQIVPTAMDALHAVQELNRRGYRQENIYVLAHDSKQTKSLSESAAANEIGMKEEGMFNAMANVFKSRGDEIRSKLTSIGLSDMEAERYEEELDRGRVLVITNVH
>NZ_CP048209.1|WP_162355524.1|1266873_1268619_-|alpha-glycosidase
MFQECFRHSTRSVWAYAYDMQTIHLRVRTKRDDVEEVTVIAGDKYDWDRFNEERPLTKIAADRFFDYWEAAVKPKFSRYAYIFRLRQGEETVYLTEDGVSVDRPQPAAGYFDFPYIHEIDLFAAPEWAKSAVFYQIMPDRFASGDAALNPEGALEWGEAPTADSCFGGDLKGILDHLDHIAELGATAIYLTPVFQAPSSHKYDTIDYRRVDEHFGDKNALKQLVDACHARGIRVVLDAVFNHTSERFLPFQDVLKHGEQSKYANWFHVRSFPAEVKDGIATYDTFGFNGQMPKLNTANPETKQYLLDVAEYWIRETDIDGWRLDVADEIDHHFWRSFRQTVKAVKPDAYIVGEVWNDAGPWLLGDQFDSVMNYPFAGKTLAFFTGEGQDGRAFAEAVNGLLMRYAQPTNEVVFNLLSSHDTPRVLTMAGGDKRKLKLAVVFLLTYIGTPCIFYGDEIGMQGGNDPECRGCMVWDEERQDRELFDFYKLLIGLRKASPALRSGRFRFLRAESGDARIVYERLGEAEHFTVWMNPTGEQTVLEHPMETNDWRDALTGEPAPVSDGVQRVELEPYGYRILRREL
>NZ_CP048209.1|WP_162355523.1|1265012_1266242_-|NTP-transferase-domain-containing-protein
MNSNTCVAMLLAGGEGRRLAPLTASMAKPAVPFGGSCRIIDYTLSNCINSGIERIGVLTQYMADSLHTHIGDGSSWQMNGQSAGITLLPSRGNGQRGYLGTADAIMQNIGYIDRLAPKHVLILSGDHIYRMDYRRLLQDHIAGGAAATIAVKRVPWRDASRFGIMLADERRMIVDFEEKPAMPKSNLASMGIYMFDWSALREALIEDCRNPASSHDFGKDIIPGMLRNGASLSAHPFEGYWRDVGTVESLWEAHMDLIDGELDETAGGSGEIWPILTRERDASAQAGSPAGKALYSSHVHPSSSVQGGLDRSVVFADVIVEKGADIRESILMPGVRVGRNARLSRVIVGEGAVIAKGAVVGSLNGEITVIAPGERVAAHPRFKVKPDRMPLSMLHRDASASAGIALGKA
>NZ_CP048209.1|WP_162355522.1|1264624_1264927_+|hypothetical-protein
MAFGVKREELERWKARAARGEIAFLTHYWHEPRFKGVKTVTKVGCDDLDKLAGWCAANGLDPKHIHRRQPFPHYDLIGGKQKEVLMREGLWEQLERFKLL
>NZ_CP048209.1|WP_162355521.1|1262819_1263872_+|Gfo/Idh/MocA-family-oxidoreductase
MTTYRIGLIGLGGMAQAHIRWLAEAGGRFRLVAVSDVNPQALAAIGAKHGIAEGKRYADFAQLIADPDVDAVVSATPNDVHAAIVRACLEAGKPFMAEKPFTRDFAEAVPLLALYERRPVPAMIGFTYRYTPAFRYARELVRSGRIGAVRSFASQYLQGWGAALYNGPFVWRFDKTVTGTGALGDLGSHMIDLARFLFGEFEELSAQMRTIVPARPDPRTGEPVRVEVDDFVSFQARMTGGVMGVFQSSRNAVGSGNQHEMSVYGDIGTIHASTLDADHLVLVREDEEGRISRSLLEVPDRCKATQYEDFLAMLDGAPTDGLPGIIDGYRNQAVMEAVIRASETRSVVEL
>NZ_CP048209.1|WP_162355520.1|1260529_1262194_+|ABC-transporter-substrate-binding-protein
MNKGKRGSLWVAALLLSFSLTAAGCGGNGGNNGGSSNASAGGNAQTKGNADGDAQAGANDAAANNAGAGDAAAKPLDPYEVVMVYPDGKQNDLGAVQSAMNDYLKQTYPDMNMTVKLNPIDWSAYADKLNLMMSSGEKFDLLWTANWMNFETQVNKGALLPLDDLVDQYGPDIKSAEGDLLDGAKRNGKLYGIHVHQELGNPQGIALRKDLVDKYHIDLTPLQSGEFKDLEPILKTIKDNEPGVTPAVGPAFPLGAYFGSGSMESIIGPVGLDQRDTNPDDTYKVVDMYETPRYMELAKLTHDWYKAGYINKDATTPGVDIWKKFQAKTAFAAIGTDLEIVKDMAIGKPSLMAGKSAQLGMDIIQVPMNIDRLHTSKLSATLQAVSQTSKDPARAMMLLDLFYKDQKLLTLFNYGVEGTHYALNNGQIDLPQGKTKDNVGFYHDNQWMLGNQMLDFTRVGEDPNKYQNYEQFNEMVKSQPSPLIGFVFDSEPVKNELIAVSKVQSTFDPGLQSGQLDPETDLPKMIGKLKAAGLDKVLAEAQKQIDAWRAANGK
>NZ_CP048209.1|WP_162355519.1|1259507_1260392_+|carbohydrate-ABC-transporter-permease
MPEHNRTHPFITIVFIAGSLACLIPFWLILMVSLSGQNALAKYGYSFWPRQFDLVAYRFLARDAEPILRSFGVSIAVTVIGTALSLFITSALAYSLSRQDFPYRGAVSLFVLVTMLFGGGLLPWYLVYTKFLHVQNTLLALIVPGLLGAFNVFIMRTYFTTSIPPSLIDSAQIDGASEYRTYFNVILPLSLPVLATIGLFTIVNYWNDWFTSLVFISSDKLYNLQYFLYNTLMNAQYLQSVADKAHIDVSSMQVQPLEELRMAMAVIAVVPVALVFPFLQKYFVKGLTIGAVKG
>NZ_CP048209.1|WP_162360303.1|1258544_1259495_+|sugar-ABC-transporter-permease
MAVERNRGSKAGRQRLRKLWKYRALWILALPGMLLLLVNNYLPMFGIFLAFKDLNFAKGIWGSAWNGLDNFKFMFTTNDIWYTIGHTIGYNLAFLVINTVLSVLVALLLNEVKNRAMSKFYQSTMLLPHFISMVVVAYLVFGFLNPDLGFINKSILEPLGREGVSWYMEPQYWPSILTVVNVWKSVGFGSIIYLATIVGIDKEFYEAAMLDGAGKWKQMTKITLPFLIPVIIILTLLAIGRIFSADFGLFYQVTMNSGMLKSTTEVIDTYVYNALLVSGDTNLASAAGLLQSVVGFVLIVSVNWIVKQISSDKGLF
>NZ_CP048209.1|WP_162355518.1|1257760_1258309_-|hypothetical-protein
MMKMTRFNRLLLVLLAAAAGFAGWQSWKLHQEREARADHLARSSSIAAYYLNTSAQTIADIGKHGKWDDPDTKRSLSMWLALTQQALTDANRTLQDYQGIRNSQDAVTMNDIFFWYLDWQNGYADALRKSAPLTAGDKAKLLQLNRIVSQVKDLYTGNIKDQAGIFAKFDALHGAWQAELGQ
>NZ_CP048209.1|WP_162355517.1|1256073_1257708_+|helix-turn-helix-domain-containing-protein
MVNMLIVDDEKFAAEGILHGQDWGALGIASVRIAGSAAEARAMLRDGRIDILVCDIEMPDEDGLSLVRWVKEHSAHTEAVFLTCHSEFAYAKEAFQLKSFDYLLKPADSDELAGVVAQMVAAIQEREEQSRVTKLYGEYRELWSRQQPMLAERFWQDLLSRRMLSFGDFLERALKDAQVGLLPGERVLPILISVEAWKRQLSERELDMMQYAVKKAAEELLLAGRRGHVVTDKGGVPFVMAYAAETEPEALGADAWTAAGSRFIAACGDYFYCEASCYVGYWADIHDAPECCDRLRDMERSNLTSTHAVHVFEPPAVARGTQSITGANTAEAPETARLSELPGYMLGGMREKAVSYVHQACVALESAPVLQPKQLDMYYHDLLQAIYHFLGLKGLSIHQIPNAQAWISMPIRSLAQYKHWAVNLVSAAMDAVREENESGGFVQQALAFMKAHVEEDISREDVAAHVSLNPAYLSRLFKKETGKSLIDYLIEIKMNRAKQLLDTTGMTVSMIAQQVGYANFSHFTKTFRKHYGVNPQEHRSGRVQ
>NZ_CP048209.1|WP_162355525.1|1269591_1270395_-|SDR-family-oxidoreductase
MRETNGKGIVGGKVAVITGAGSGIGRAAALRLAEEGARVALVDLKADRVEDLRKRIADAGGEAIAVEADIAKPADIESAVKEAAGKWERLDIVFANAGINGVLAPIETMAPEEWSTTLDINLKGTFLTVKYAVPFLKKNGGSIVITSSINGNRVFSNFGMSAYSTSKAGQVAFMQMAALELAQYGIRVNAVCPGAIKTHIGQNTHPAPELEEIQIPVEYPEGDQPLENGPGRASQVGDLVLFLASDASSHITGTPIFIDGAESLLHG
>NZ_CP048209.1|WP_162355526.1|1270541_1271294_-|AraC-family-transcriptional-regulator
MNGKLEFFLYRSHQPGTYVDFHKHTCYELVYYVSGSGTMTLGGHTLRYGPGTMTMTRPNYMHDERHDEETEVVFFGFRYDDFPVALQNGLVADTDERTILSLILTMKEELLAQKAHYAARANLLLNEIVLLLGRRSEADGSADDHRPERLFYARRYLDENFTQPVELRTLAELSGYSEDHFRHLFKEQTGLPPGQYLLRKRLEAAKDQLLHTAQPVSAVGVDCGFSTTSQFIELFKRAFGVTPLQYRKTR
>NZ_CP048209.1|WP_162355527.1|1271415_1272276_+|phytanoyl-CoA-dioxygenase-family-protein
MTNGVEQGLTEKEVNRYWEDGFLVFDDILTAEEVEELRAACEQPQITGLRSQKDYETKTVHSLGITALHPAFLKLAKHPAIVAKLKPLLGEDIELQHSKLATKPPTKGVGIFAWHQDYAFYPHTNTDMLSVMVMLDDATPENGCMQMVKGSHKLGTLNHQVGGRFVAECQESRYWEQPANPDDIVYITPKTGGISIHHTLTLHGSDANASGKPRRGIVFSYRAGDAHQLADTLFDDTGLIISGSRKGVVRCNVGTVTLPYRGGGMPYGSAWNQVGSFAAERNAAQE
>NZ_CP048209.1|WP_162355528.1|1272404_1273229_-|sugar-phosphate-isomerase/epimerase
MRLGGPIMAKTADPQEWVAAHRSEGYAAAYCPDLKLEQAVEIAAYRKAAEEADLIIAEVGAWSNPISTDDETRRSAIRYCQQRLALADEIGALCCVNIAGSRGEKWDGPHPSNLSEDTFALIVDTVREIIDAVRPKTACYTLETMPWVFPDTADSYLRLVRAIGRPGFAVHLDPVNMIASPRDYYYNGDLIRDCFAKLGPYIKGVHAKDIALADELTVHLSERRPGLGGLDYRTLLTEMGKLDKNVPFMLEHLHTAEDYKLAAAYVRSVQAELN
>NZ_CP048209.1|WP_162355529.1|1273516_1274629_-|NADH:flavin-oxidoreductase
MPSNPAKSLFEPFRSATLSLDNRIVMAPMTRGFSPGGVPGENVAAYYKRRAENGVGLIVTEGTLINHPAAGASTKWPHFYGANALEGWSGVVRAVHEAGGKIMPQLWHIGLTRKAGTGTNPDAPSVGPSGLNLAGEQMGEPLSEAEIADLIAAYAQAAADAKRLGFDGIELHGAHGYLIDQFFWGVTNVRTDKYGGDLVKRTRFAVEVVEACRRAVGPGFPIMMRFSQWKDNAYDAKLAATPDELSLFLQPLVDAGVDVFHCSTRRFWEPAFADGADLNLAGWTKKLTGLPTITVGSVGLDLEFTRLFKEKKGAGTTGIDGLLERLDRGEFDLVAIGRALLNDPEWAKKIKEGRQDELLPFSPESTQTLY
>NZ_CP048209.1|WP_162360305.1|1275779_1276172_+|hypothetical-protein
MVVAAFTKAGGQFIKQLLARDVPFAAVTNSTVERKWLMKLGVESILLVNTIEPNDWQAPGFPVGKAFLFESSLSLCCRYVTMIRRWTDQPLHVITGRTNGRLIYRSLGADRILHAPTGRKGFPLDEHNLI
>NZ_CP048209.1|WP_162360306.1|1276385_1276463_+|potassium-transporting-ATPase-subunit-F
MIAIGIIAIALLIYLGFVLVKPEKF
>NZ_CP048209.1|WP_162360307.1|1276616_1278290_+|potassium-transporting-ATPase-subunit-KdpA
MGFVQVAITLIIIMLLVKPAGTYLANVFSRERTGLDRVFGPIERLLYRIIGVREDSSMGWRAYLGAVLLSNFIMLLLCYLVLRLQSYLPLNPDGIGNMPAGQAFNTAVSFMTNTNWQSYSGENGLSYLSQLIAITFPMFTSAATGFAVAIAFIRGLIGKEDNLGNFYVDITRSILRVFLPLSFIAALFLVFQGVPQTLAGAIHASTPAGGEQTITRGLVASLESIKHLGTNGGGWMGTNASHPFENPTALANLVHILCMMLLPTALIYAFGLMIRNKKQGWAVFAAMSAIFLIMLTTVFVSEYRGVGALDAMGVHGNMEGKEVRLGISESALFTAVTTAATTGSVNNMHESLTPLGGLVPMAEMMLNNVFGGKGVGLLNGLLYLILAIFICGLMVGRTPEFLGKKIEGKEVKLACIALLIHPFIILAPTAIAFLSPNARSSIANGGMHGISEVLYAFSSGAANNGSAFGGLSANTDFYNIGIGIVMLLGRYVSIIAMIAIAGSFAVKRIVPATTGTLRTNTALFSGILLVVILVVGALTFFPALALGPIAEQLAMAK
>NZ_CP048209.1|WP_162355530.1|1279667_1281710_+|potassium-transporting-ATPase-subunit-KdpB
MAAASKKTYAKRIVVQAAADAFKKLNPAVMIGNPVMFIVEVGTLITLLLAIKPDLFVGSGTGRGYNIAVFVILLFTVLFANFAEALAEGRGKAQADTLRKTKSETTAKLVHKDGSLKQVSSTQLRKGDIIRVDTGEIIPTDGEIVEGLASIDESAITGESAPVIKEAGGDFSSVTGGTRVASDFIVVQVMTDPGESFLDRMIALVEGAKRQKTPNEIALTTLLAVLTMIFLVVIMTLVPMADYLDVKLDIATLIALLVCLIPTTIGGLLSAIGIAGMDRVTQYNVLAMSGKAVEAAGDIDTLILDKTGTITYGNRMASEFMPVSGVSLQEVTQASLRASMKDETPEGRSIVELALKLGAMPGNPADEAAEPVAFTAETRMSGLDLADGTKIRKGAVDAMKRYVAAQGGVIPGNLDETANRIAKAGGTPLAVAIGDRIFGVIYLKDTVKPGLKERFAELRGMGIKTIMCTGDNPLTAATIALEAGVDDFIAEAKPEDKIAAIRKEQQEGKLVAMTGDGTNDAPALAQADVGLAMNSGTMAAKEAANMIDLDSDPTKLLSVVAIGKQLLITRGALTTFSIANDIAKYFAIIPALFILAMPQLQSLNIMNLASPKSAILSALIFNAIIIPLLIPVAMKGVKYRAMSADRLLMRNVLMFGIGGVIVPFAGIKIIDLVLHGLRLA
>NZ_CP048209.1|WP_162355531.1|1281738_1282305_+|potassium-transporting-ATPase-subunit-KdpC
MKSLWIAVRFSLVWMLVCGLIYPLATTGFAQVLFPKQADGSLMTGEDGAVTGSELLAQNVQSPQLFHPRASMANYDPTASAGSNRAVATADYAKEIGGKVAAVKADNPNLTDIPADLVTASGSGFDPDLSPEAAKAQAARISRATGMSEAALDKLIDDSTKSRQLGIFGEPRVNVNELNEELLKHIKP

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Crispr_ID: NZ_CP048209_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_6

1273367-1273454

Orphan

Consensus_repeat	Method
CCCGAACGCGTAATACGCCCGAACGCGGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_6

>merge|NZ_CP048209|6|1273367-1273454|CRISPRCasFinder
CCCGAACGCGTAATACGCCCGAACGCGGCAATACGCCCCCGAACGCGGCAATACGCCCCCGAACGCGCAATACGCCCGAACGCGGCAA

>NZ_CP048209|6|5|1273367-1273454|CRISPRCasFinder
CCCGAACGCGTAATACGCCCGAACGCGGCAA	TACGCCCCCGAACGCGGCAATACGCC
CCCGAACGCGCAATACGCCCGAACGCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355533.1\|1286273_1286981_+\|response-regulator	unknown	unknown	gnl\|CDD\|182522
NZ_CP048209.1\|WP_162360308.1\|1284697_1286272_+\|DUF4118-domain-containing-protein	unknown	unknown	gnl\|CDD\|225115
NZ_CP048209.1\|WP_162355528.1\|1272404_1273229_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162360305.1\|1275779_1276172_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360306.1\|1276385_1276463_+\|potassium-transporting-ATPase-subunit-F	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355534.1\|1287412_1287763_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355531.1\|1281738_1282305_+\|potassium-transporting-ATPase-subunit-KdpC	unknown	unknown	gnl\|CDD\|376890
NZ_CP048209.1\|WP_162360307.1\|1276616_1278290_+\|potassium-transporting-ATPase-subunit-KdpA	unknown	unknown	gnl\|CDD\|377138
NZ_CP048209.1\|WP_162355521.1\|1262819_1263872_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048209.1\|WP_162355532.1\|1282392_1284738_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225115
NZ_CP048209.1\|WP_162355525.1\|1269591_1270395_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP048209.1\|WP_162355524.1\|1266873_1268619_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477
NZ_CP048209.1\|WP_162355527.1\|1271415_1272276_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP048209.1\|WP_162355520.1\|1260529_1262194_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378792
NZ_CP048209.1\|WP_162355523.1\|1265012_1266242_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|179997
NZ_CP048209.1\|WP_162355529.1\|1273516_1274629_-\|NADH:flavin-oxidoreductase	unknown	unknown	gnl\|CDD\|240095
NZ_CP048209.1\|WP_162355522.1\|1264624_1264927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355530.1\|1279667_1281710_+\|potassium-transporting-ATPase-subunit-KdpB	unknown	unknown	gnl\|CDD\|234905
NZ_CP048209.1\|WP_162360304.1\|1268849_1269176_+\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP048209.1\|WP_162355526.1\|1270541_1271294_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355533.1\|1286273_1286981_+\|response-regulator	gnl\|CDD\|182522	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional.	4.18812e-91
NZ_CP048209.1\|WP_162355528.1\|1272404_1273229_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	5.494e-14
NZ_CP048209.1\|WP_162360308.1\|1284697_1286272_+\|DUF4118-domain-containing-protein	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	1.84233e-153
NZ_CP048209.1\|WP_162355531.1\|1281738_1282305_+\|potassium-transporting-ATPase-subunit-KdpC	gnl\|CDD\|376890	pfam02669, KdpC, K+-transporting ATPase, c chain. This family consists of K+-transporting ATPase, c chain, KdpC. KdpC forms strong interactions with the KdpA subunit, serving to assemble and stabilize the Kdp complex. It has been suggested that KdpC could be one of the connecting links between the energy providing subunit KdpB and the K+-transporting subunit KdpA. The K+ transport system actively transports K+ ions via ATP hydrolysis.	2.51128e-85
NZ_CP048209.1\|WP_162360307.1\|1276616_1278290_+\|potassium-transporting-ATPase-subunit-KdpA	gnl\|CDD\|377138	pfam03814, KdpA, Potassium-transporting ATPase A subunit.	0
NZ_CP048209.1\|WP_162355521.1\|1262819_1263872_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.09587e-69
NZ_CP048209.1\|WP_162355532.1\|1282392_1284738_+\|histidine-kinase	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	6.90309e-130
NZ_CP048209.1\|WP_162355525.1\|1269591_1270395_-\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	5.49149e-91
NZ_CP048209.1\|WP_162355524.1\|1266873_1268619_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP048209.1\|WP_162355527.1\|1271415_1272276_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.84637e-31
NZ_CP048209.1\|WP_162355520.1\|1260529_1262194_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	6.24322e-46
NZ_CP048209.1\|WP_162355523.1\|1265012_1266242_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	1.59217e-179
NZ_CP048209.1\|WP_162355529.1\|1273516_1274629_-\|NADH:flavin-oxidoreductase	gnl\|CDD\|240095	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP048209.1\|WP_162360304.1\|1268849_1269176_+\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	3.16432e-30
NZ_CP048209.1\|WP_162355530.1\|1279667_1281710_+\|potassium-transporting-ATPase-subunit-KdpB	gnl\|CDD\|234905	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB.	0
NZ_CP048209.1\|WP_162355526.1\|1270541_1271294_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.59882e-29

>NZ_CP048209.1|WP_162355528.1|1272404_1273229_-|sugar-phosphate-isomerase/epimerase
MRLGGPIMAKTADPQEWVAAHRSEGYAAAYCPDLKLEQAVEIAAYRKAAEEADLIIAEVGAWSNPISTDDETRRSAIRYCQQRLALADEIGALCCVNIAGSRGEKWDGPHPSNLSEDTFALIVDTVREIIDAVRPKTACYTLETMPWVFPDTADSYLRLVRAIGRPGFAVHLDPVNMIASPRDYYYNGDLIRDCFAKLGPYIKGVHAKDIALADELTVHLSERRPGLGGLDYRTLLTEMGKLDKNVPFMLEHLHTAEDYKLAAAYVRSVQAELN
>NZ_CP048209.1|WP_162355527.1|1271415_1272276_+|phytanoyl-CoA-dioxygenase-family-protein
MTNGVEQGLTEKEVNRYWEDGFLVFDDILTAEEVEELRAACEQPQITGLRSQKDYETKTVHSLGITALHPAFLKLAKHPAIVAKLKPLLGEDIELQHSKLATKPPTKGVGIFAWHQDYAFYPHTNTDMLSVMVMLDDATPENGCMQMVKGSHKLGTLNHQVGGRFVAECQESRYWEQPANPDDIVYITPKTGGISIHHTLTLHGSDANASGKPRRGIVFSYRAGDAHQLADTLFDDTGLIISGSRKGVVRCNVGTVTLPYRGGGMPYGSAWNQVGSFAAERNAAQE
>NZ_CP048209.1|WP_162355526.1|1270541_1271294_-|AraC-family-transcriptional-regulator
MNGKLEFFLYRSHQPGTYVDFHKHTCYELVYYVSGSGTMTLGGHTLRYGPGTMTMTRPNYMHDERHDEETEVVFFGFRYDDFPVALQNGLVADTDERTILSLILTMKEELLAQKAHYAARANLLLNEIVLLLGRRSEADGSADDHRPERLFYARRYLDENFTQPVELRTLAELSGYSEDHFRHLFKEQTGLPPGQYLLRKRLEAAKDQLLHTAQPVSAVGVDCGFSTTSQFIELFKRAFGVTPLQYRKTR
>NZ_CP048209.1|WP_162355525.1|1269591_1270395_-|SDR-family-oxidoreductase
MRETNGKGIVGGKVAVITGAGSGIGRAAALRLAEEGARVALVDLKADRVEDLRKRIADAGGEAIAVEADIAKPADIESAVKEAAGKWERLDIVFANAGINGVLAPIETMAPEEWSTTLDINLKGTFLTVKYAVPFLKKNGGSIVITSSINGNRVFSNFGMSAYSTSKAGQVAFMQMAALELAQYGIRVNAVCPGAIKTHIGQNTHPAPELEEIQIPVEYPEGDQPLENGPGRASQVGDLVLFLASDASSHITGTPIFIDGAESLLHG
>NZ_CP048209.1|WP_162360304.1|1268849_1269176_+|general-stress-protein
MKPSVQIVPTAMDALHAVQELNRRGYRQENIYVLAHDSKQTKSLSESAAANEIGMKEEGMFNAMANVFKSRGDEIRSKLTSIGLSDMEAERYEEELDRGRVLVITNVH
>NZ_CP048209.1|WP_162355524.1|1266873_1268619_-|alpha-glycosidase
MFQECFRHSTRSVWAYAYDMQTIHLRVRTKRDDVEEVTVIAGDKYDWDRFNEERPLTKIAADRFFDYWEAAVKPKFSRYAYIFRLRQGEETVYLTEDGVSVDRPQPAAGYFDFPYIHEIDLFAAPEWAKSAVFYQIMPDRFASGDAALNPEGALEWGEAPTADSCFGGDLKGILDHLDHIAELGATAIYLTPVFQAPSSHKYDTIDYRRVDEHFGDKNALKQLVDACHARGIRVVLDAVFNHTSERFLPFQDVLKHGEQSKYANWFHVRSFPAEVKDGIATYDTFGFNGQMPKLNTANPETKQYLLDVAEYWIRETDIDGWRLDVADEIDHHFWRSFRQTVKAVKPDAYIVGEVWNDAGPWLLGDQFDSVMNYPFAGKTLAFFTGEGQDGRAFAEAVNGLLMRYAQPTNEVVFNLLSSHDTPRVLTMAGGDKRKLKLAVVFLLTYIGTPCIFYGDEIGMQGGNDPECRGCMVWDEERQDRELFDFYKLLIGLRKASPALRSGRFRFLRAESGDARIVYERLGEAEHFTVWMNPTGEQTVLEHPMETNDWRDALTGEPAPVSDGVQRVELEPYGYRILRREL
>NZ_CP048209.1|WP_162355523.1|1265012_1266242_-|NTP-transferase-domain-containing-protein
MNSNTCVAMLLAGGEGRRLAPLTASMAKPAVPFGGSCRIIDYTLSNCINSGIERIGVLTQYMADSLHTHIGDGSSWQMNGQSAGITLLPSRGNGQRGYLGTADAIMQNIGYIDRLAPKHVLILSGDHIYRMDYRRLLQDHIAGGAAATIAVKRVPWRDASRFGIMLADERRMIVDFEEKPAMPKSNLASMGIYMFDWSALREALIEDCRNPASSHDFGKDIIPGMLRNGASLSAHPFEGYWRDVGTVESLWEAHMDLIDGELDETAGGSGEIWPILTRERDASAQAGSPAGKALYSSHVHPSSSVQGGLDRSVVFADVIVEKGADIRESILMPGVRVGRNARLSRVIVGEGAVIAKGAVVGSLNGEITVIAPGERVAAHPRFKVKPDRMPLSMLHRDASASAGIALGKA
>NZ_CP048209.1|WP_162355522.1|1264624_1264927_+|hypothetical-protein
MAFGVKREELERWKARAARGEIAFLTHYWHEPRFKGVKTVTKVGCDDLDKLAGWCAANGLDPKHIHRRQPFPHYDLIGGKQKEVLMREGLWEQLERFKLL
>NZ_CP048209.1|WP_162355521.1|1262819_1263872_+|Gfo/Idh/MocA-family-oxidoreductase
MTTYRIGLIGLGGMAQAHIRWLAEAGGRFRLVAVSDVNPQALAAIGAKHGIAEGKRYADFAQLIADPDVDAVVSATPNDVHAAIVRACLEAGKPFMAEKPFTRDFAEAVPLLALYERRPVPAMIGFTYRYTPAFRYARELVRSGRIGAVRSFASQYLQGWGAALYNGPFVWRFDKTVTGTGALGDLGSHMIDLARFLFGEFEELSAQMRTIVPARPDPRTGEPVRVEVDDFVSFQARMTGGVMGVFQSSRNAVGSGNQHEMSVYGDIGTIHASTLDADHLVLVREDEEGRISRSLLEVPDRCKATQYEDFLAMLDGAPTDGLPGIIDGYRNQAVMEAVIRASETRSVVEL
>NZ_CP048209.1|WP_162355520.1|1260529_1262194_+|ABC-transporter-substrate-binding-protein
MNKGKRGSLWVAALLLSFSLTAAGCGGNGGNNGGSSNASAGGNAQTKGNADGDAQAGANDAAANNAGAGDAAAKPLDPYEVVMVYPDGKQNDLGAVQSAMNDYLKQTYPDMNMTVKLNPIDWSAYADKLNLMMSSGEKFDLLWTANWMNFETQVNKGALLPLDDLVDQYGPDIKSAEGDLLDGAKRNGKLYGIHVHQELGNPQGIALRKDLVDKYHIDLTPLQSGEFKDLEPILKTIKDNEPGVTPAVGPAFPLGAYFGSGSMESIIGPVGLDQRDTNPDDTYKVVDMYETPRYMELAKLTHDWYKAGYINKDATTPGVDIWKKFQAKTAFAAIGTDLEIVKDMAIGKPSLMAGKSAQLGMDIIQVPMNIDRLHTSKLSATLQAVSQTSKDPARAMMLLDLFYKDQKLLTLFNYGVEGTHYALNNGQIDLPQGKTKDNVGFYHDNQWMLGNQMLDFTRVGEDPNKYQNYEQFNEMVKSQPSPLIGFVFDSEPVKNELIAVSKVQSTFDPGLQSGQLDPETDLPKMIGKLKAAGLDKVLAEAQKQIDAWRAANGK
>NZ_CP048209.1|WP_162355529.1|1273516_1274629_-|NADH:flavin-oxidoreductase
MPSNPAKSLFEPFRSATLSLDNRIVMAPMTRGFSPGGVPGENVAAYYKRRAENGVGLIVTEGTLINHPAAGASTKWPHFYGANALEGWSGVVRAVHEAGGKIMPQLWHIGLTRKAGTGTNPDAPSVGPSGLNLAGEQMGEPLSEAEIADLIAAYAQAAADAKRLGFDGIELHGAHGYLIDQFFWGVTNVRTDKYGGDLVKRTRFAVEVVEACRRAVGPGFPIMMRFSQWKDNAYDAKLAATPDELSLFLQPLVDAGVDVFHCSTRRFWEPAFADGADLNLAGWTKKLTGLPTITVGSVGLDLEFTRLFKEKKGAGTTGIDGLLERLDRGEFDLVAIGRALLNDPEWAKKIKEGRQDELLPFSPESTQTLY
>NZ_CP048209.1|WP_162360305.1|1275779_1276172_+|hypothetical-protein
MVVAAFTKAGGQFIKQLLARDVPFAAVTNSTVERKWLMKLGVESILLVNTIEPNDWQAPGFPVGKAFLFESSLSLCCRYVTMIRRWTDQPLHVITGRTNGRLIYRSLGADRILHAPTGRKGFPLDEHNLI
>NZ_CP048209.1|WP_162360306.1|1276385_1276463_+|potassium-transporting-ATPase-subunit-F
MIAIGIIAIALLIYLGFVLVKPEKF
>NZ_CP048209.1|WP_162360307.1|1276616_1278290_+|potassium-transporting-ATPase-subunit-KdpA
MGFVQVAITLIIIMLLVKPAGTYLANVFSRERTGLDRVFGPIERLLYRIIGVREDSSMGWRAYLGAVLLSNFIMLLLCYLVLRLQSYLPLNPDGIGNMPAGQAFNTAVSFMTNTNWQSYSGENGLSYLSQLIAITFPMFTSAATGFAVAIAFIRGLIGKEDNLGNFYVDITRSILRVFLPLSFIAALFLVFQGVPQTLAGAIHASTPAGGEQTITRGLVASLESIKHLGTNGGGWMGTNASHPFENPTALANLVHILCMMLLPTALIYAFGLMIRNKKQGWAVFAAMSAIFLIMLTTVFVSEYRGVGALDAMGVHGNMEGKEVRLGISESALFTAVTTAATTGSVNNMHESLTPLGGLVPMAEMMLNNVFGGKGVGLLNGLLYLILAIFICGLMVGRTPEFLGKKIEGKEVKLACIALLIHPFIILAPTAIAFLSPNARSSIANGGMHGISEVLYAFSSGAANNGSAFGGLSANTDFYNIGIGIVMLLGRYVSIIAMIAIAGSFAVKRIVPATTGTLRTNTALFSGILLVVILVVGALTFFPALALGPIAEQLAMAK
>NZ_CP048209.1|WP_162355530.1|1279667_1281710_+|potassium-transporting-ATPase-subunit-KdpB
MAAASKKTYAKRIVVQAAADAFKKLNPAVMIGNPVMFIVEVGTLITLLLAIKPDLFVGSGTGRGYNIAVFVILLFTVLFANFAEALAEGRGKAQADTLRKTKSETTAKLVHKDGSLKQVSSTQLRKGDIIRVDTGEIIPTDGEIVEGLASIDESAITGESAPVIKEAGGDFSSVTGGTRVASDFIVVQVMTDPGESFLDRMIALVEGAKRQKTPNEIALTTLLAVLTMIFLVVIMTLVPMADYLDVKLDIATLIALLVCLIPTTIGGLLSAIGIAGMDRVTQYNVLAMSGKAVEAAGDIDTLILDKTGTITYGNRMASEFMPVSGVSLQEVTQASLRASMKDETPEGRSIVELALKLGAMPGNPADEAAEPVAFTAETRMSGLDLADGTKIRKGAVDAMKRYVAAQGGVIPGNLDETANRIAKAGGTPLAVAIGDRIFGVIYLKDTVKPGLKERFAELRGMGIKTIMCTGDNPLTAATIALEAGVDDFIAEAKPEDKIAAIRKEQQEGKLVAMTGDGTNDAPALAQADVGLAMNSGTMAAKEAANMIDLDSDPTKLLSVVAIGKQLLITRGALTTFSIANDIAKYFAIIPALFILAMPQLQSLNIMNLASPKSAILSALIFNAIIIPLLIPVAMKGVKYRAMSADRLLMRNVLMFGIGGVIVPFAGIKIIDLVLHGLRLA
>NZ_CP048209.1|WP_162355531.1|1281738_1282305_+|potassium-transporting-ATPase-subunit-KdpC
MKSLWIAVRFSLVWMLVCGLIYPLATTGFAQVLFPKQADGSLMTGEDGAVTGSELLAQNVQSPQLFHPRASMANYDPTASAGSNRAVATADYAKEIGGKVAAVKADNPNLTDIPADLVTASGSGFDPDLSPEAAKAQAARISRATGMSEAALDKLIDDSTKSRQLGIFGEPRVNVNELNEELLKHIKP
>NZ_CP048209.1|WP_162355532.1|1282392_1284738_+|histidine-kinase
MEGFKRKTPEEMLQSISKLHRGTLKIYIGPVSGSGKTYHMLREGQALRQQGVDVVLCAVSTLRRPETVEQVGELERVPSIHWFRDGTEYKDLNLDALAERNPEVVLADGLAHRNREGARFPTRLEDIRFLLDKGISVITTVNVYELDGYTELAHKLTGIEAKCTVPADTLELADEVRLIDVTPETILNRLAEGHLQGSADLPAFKRGNLGVLRELALRLVAEDVGESLRSYREELGLSGPAGTGERILVSAQYHWNGSIYVRRGQQIAKRLNGELIVVTFRNKKQALSKEAAAYRRSIVKLAEKVGGSFEELPFRNRRLIPRTIVEYALKHGITRIVMGHTKHTRWQELRQGSIVDRLLKLARNMDVFLVADRAEHEGERLLPAKFASAEERQRYRRLSEKEVDKRIGEIRRGTFKVYIGSAPGVGKTYMMLRDGNDLLRKGIDVRIGLLETHERPETIAQIGGLALIPRQRIVYQGVSLEELDTDAVIQACPEVVLVDELAHTNVPGSRNKKRYEDVLAILDAGISVISTVNVQHLESLNDAVEQITGIRVRETVPDSILRLADEVQLIDVAPEALRNRMREGKIYAMGKVEQALSNFFKTGNLIALRELALREIADDVDERLESLERNSSLRGPYRKRESIFVCVNDTPRAQRLIRRGFRTAYRLKAPWSVNYVRIGQARGGGEPDRNLEALERLTVRLGGKFDVHRAESHREIANVLSAKADQAEATQLVLGQSSVSWRELFLHGSVVKNLIGLSRHRDILIVADYAAKEGEERRNGR
>NZ_CP048209.1|WP_162360308.1|1284697_1286272_+|DUF4118-domain-containing-protein
MPRRKVRSVETAVEQRRGRKLLQYAGTTAGVAALSAVLHEWGQPFDTVNIALVYLFPVLFSAVYWGLVPSFYAAAAGMLAFDYFFVPPLHSFSVADLRYLLSFAVYLAVAALTATLAARLKQQVKLSKEREAHTAALYALSRQMTAVGEIKALLDNIARQVSETVGAQIAIYLPGGRSELARTAWSPGDHAFGQGESAMVIAKWVLEHGRMAGRGTGTLGEFPGLFVPLRTEERTYGVIAVRADGETLSADTRRLLEAFGGLAATAIARVKLSEEAKLAQLTAESERIRTALLDSVSHELRTPLATIIGSATGLIEGDEVFSPADRLELLGTIRDGALRMNRLVTNLLGMVKLESGMLALRRDWVDAEDMIGVVLAQVKGFVGRRRIDVRIQEPAPYFPGDEVLLEQVLVNIVSNAIKYSPDGSDIVIAVRQSGSWVRISVADNGTGIADADRERIFDKFYRGSRTSGTTGTGLGLAICKGIVEAHGGTITAAPRAERGTLVTVALPAGDPEMPEGWQRQEEEV
>NZ_CP048209.1|WP_162355533.1|1286273_1286981_+|response-regulator
MTTGNGARILVVDDEPQIRKLLKVTLKAHQFDVLEAETGEDGIYQASVNYPDLIVLDLGLPDVPGMTVLRRIREWSRIPVIVLTAKDREADKIEALDGGADDYVTKPFGMGELVARIRVALRHAGNAQQEPVLRFGRLVIDLAQRLVELGGSRVKLTPTEYELLKALASNAGKVLTQRQLLQQVWGGHHHETDSHYLRIYIGHLRKKLEEDPTRPTFIETEPGIGYRFLLQEPAE
>NZ_CP048209.1|WP_162355534.1|1287412_1287763_+|hypothetical-protein
MNYEISIHLYDDWVDTVKVIFRGSGHPLPDHLTPDQAALAYFLQTAASQEEALRQRAENEERLHDIQQKLVDNFETVILPDLRSRTGYEGHAFAFKWVYNQGEHIIEEHSSYRIPL

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Crispr_ID: NZ_CP048209_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_7

1300420-1300531

Orphan

Consensus_repeat	Method
TAGCTCAGTTGGTAGAGCAACTGACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_7

>merge|NZ_CP048209|7|1300420-1300531|CRISPRCasFinder
TAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCGTGGGTTCGACTCCTATCGCCGGCACCATTTTTGCTTGAGCCATTAGCTCAGTTGGTAGAGCACCTGACTT

>NZ_CP048209|7|6|1300420-1300531|CRISPRCasFinder
TAGCTCAGTTGGTAGAGCAACTGACTT	GTAATCAGTAGGTCGTGGGTTCGACTCCTATCGCCGGCACCATTTTTGCTTGAGCCAT
TAGCTCAGTTGGTAGAGCACCTGACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355543.1\|1302511_1303429_+\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP048209.1\|WP_162355544.1\|1303557_1304070_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355533.1\|1286273_1286981_+\|response-regulator	unknown	unknown	gnl\|CDD\|182522
NZ_CP048209.1\|WP_162355534.1\|1287412_1287763_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355548.1\|1310477_1310843_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379565
NZ_CP048209.1\|WP_162360309.1\|1304195_1304738_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360308.1\|1284697_1286272_+\|DUF4118-domain-containing-protein	unknown	unknown	gnl\|CDD\|225115
NZ_CP048209.1\|WP_162355550.1\|1311481_1312459_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|132002
NZ_CP048209.1\|WP_162355545.1\|1305221_1305911_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP048209.1\|WP_162355535.1\|1287898_1288351_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP048209.1\|WP_162355549.1\|1310973_1311420_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP048209.1\|WP_162355546.1\|1306205_1307315_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|119407
NZ_CP048209.1\|WP_162355541.1\|1293456_1294014_+\|DJ-1/PfpI-family-protein	unknown	unknown	gnl\|CDD\|153243
NZ_CP048209.1\|WP_162355540.1\|1292919_1293267_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355537.1\|1289674_1290235_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP048209.1\|WP_162355538.1\|1290250_1291693_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_CP048209.1\|WP_162355542.1\|1301287_1302439_+\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	unknown	unknown	gnl\|CDD\|239432
NZ_CP048209.1\|WP_162355539.1\|1291967_1292582_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP048209.1\|WP_162355536.1\|1288860_1289634_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|223979
NZ_CP048209.1\|WP_162355547.1\|1307572_1309876_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|224748

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355543.1\|1302511_1303429_+\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.61656e-91
NZ_CP048209.1\|WP_162355533.1\|1286273_1286981_+\|response-regulator	gnl\|CDD\|182522	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional.	4.18812e-91
NZ_CP048209.1\|WP_162355545.1\|1305221_1305911_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.68511e-25
NZ_CP048209.1\|WP_162355550.1\|1311481_1312459_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|132002	TIGR02957, putative_sigma_factor, RNA polymerase sigma-70 factor, TIGR02957 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building and bidirectional best hits, to represent a conserved family. This family is found in a limited number of bacterial lineages. This family includes apparent paralogous expansion in Streptomyces coelicolor A3(2), and multiple copies in Mycobacterium smegmatis MC2, Streptomyces avermitilis MA-4680 and Nocardia farcinica IFM10152.	9.94843e-101
NZ_CP048209.1\|WP_162360308.1\|1284697_1286272_+\|DUF4118-domain-containing-protein	gnl\|CDD\|225115	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms].	1.84233e-153
NZ_CP048209.1\|WP_162355548.1\|1310477_1310843_-\|hypothetical-protein	gnl\|CDD\|379565	pfam14338, Mrr_N, Mrr N-terminal domain. This domain is found at the N-terminus of the Mrr restriction endonuclease catalytic domain, pfam04471. Fold recognition analysis predicts that it is a diverged member of the winged helix variant of helix turn helix proteins. It may play a role in DNA sequence recognition.	2.93368e-16
NZ_CP048209.1\|WP_162355535.1\|1287898_1288351_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	0.000645257
NZ_CP048209.1\|WP_162355549.1\|1310973_1311420_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.81666e-32
NZ_CP048209.1\|WP_162355546.1\|1306205_1307315_+\|SH3-domain-containing-protein	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	9.40262e-62
NZ_CP048209.1\|WP_162355541.1\|1293456_1294014_+\|DJ-1/PfpI-family-protein	gnl\|CDD\|153243	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus. PfpI is an ATP-independent intracellular proteases which may hydrolyze small peptides to provide a nutritional source. Only Cys of the catalytic triad typical of GATase1 domains is conserved in this group. This Cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow.	1.73852e-82
NZ_CP048209.1\|WP_162355537.1\|1289674_1290235_+\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	1.01285e-46
NZ_CP048209.1\|WP_162355538.1\|1290250_1291693_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP048209.1\|WP_162355542.1\|1301287_1302439_+\|mandelate-racemase/muconate-lactonizing-enzyme-family-protein	gnl\|CDD\|239432	cd03316, MR_like, Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).	5.32709e-117
NZ_CP048209.1\|WP_162355539.1\|1291967_1292582_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	3.67615e-05
NZ_CP048209.1\|WP_162355536.1\|1288860_1289634_+\|NUDIX-hydrolase	gnl\|CDD\|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	2.33928e-31
NZ_CP048209.1\|WP_162355547.1\|1307572_1309876_+\|acetyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	4.95391e-79

>NZ_CP048209.1|WP_162355541.1|1293456_1294014_+|DJ-1/PfpI-family-protein
MSKRILIVTGDAAEVLEVYYPYFRVLEEGYEAVIAAPAKKVLHTVVHDFVEGWDTYTEKPAHLLPAHVAFADVDPAAFDGLLIPGGRAPEYIRGNEDLPRILSHFLEADKPVGAICHGVQVFAALQDTRYFEGRTMTAYNACRLDVERLGASYAQETLHVDGRLVSGHAWPDLPGFMREFLKLLA
>NZ_CP048209.1|WP_162355540.1|1292919_1293267_+|hypothetical-protein
MNEKVRSYFRLKRKQKEIEQELAKLREDIIAYCAENAVTEMDIGGYAVKVIIQRRKEYDEGKLFEALPDLELWRLLSSPDNGKITNLVKLNVLSDERLNDTYTVKEVSYLQVERK
>NZ_CP048209.1|WP_162355539.1|1291967_1292582_+|transposase
MQRWLGLSSIRASSLHRKLERLPTESLQELCHQAAKKLATMYCDASLQSLGRLVAVDSSMVTLGSIRAEWPYVSKDFHAIKPHLSLGLVNETTSYPLRTVLSTAVVSDNDDEVLAALVEPSDVTYVFDRGYVNYGRYIAWSENDIRFVARIYAWHWKIEIFFRALKAQLNLCHGDLFKPCFRNVNERAEAAANAEDDRAFTRRN
>NZ_CP048209.1|WP_162355538.1|1290250_1291693_+|nicotinate-phosphoribosyltransferase
MNYEQMTLHTDKYQINMMYAHWVQGSQDEQAVFEVFFRKLPFGNGYAVFAGLERVVNYIRHIRFGEEEIAFLREQEENYAEGFLDALREFRFTGQLDAVPEGTVVFANEPLVRVTARIFEAQLIETAMLNFINFQTLIATKASRIKQVAGDDGLLEFGTRRAQEADASVWGARAAYIAGFHATSNLRAGMMFGIPTKGTHAHAWVQGHDSEEEAFRKYAEVLPDQVTLLVDTYDTLRSGVPNAIRVGKLLEKQGKRMNGIRLDSGDLAYLSQEARRMLDEAGLNYVGIVASNDLDEGLIFSLKGQGAKIDVWGVGTQLITSGDQPSLGGVYKLVAREKDGEMIPVIKISGNPEKVTTPGRKEVYRIINRETGIAEGDYLTLVEEGPMDTEEPLRLFDPVHHYIQKVIQRYDAVPLLAEIFRDGELVYEMPSLDEIRRYHGEQLALFWPQVLRKTNPAEYRVNLSETAWELKMALIAQYRA
>NZ_CP048209.1|WP_162355537.1|1289674_1290235_+|cysteine-hydrolase
MKALIVIDYTVDFVVGKLPCGQPAIAIEDRIAELSQQFAAQGDYVVMAVDLHRERDELHPEHKLFPPHNIEGTNGRDLYGKLKDVYEANRERIYWMDKTRYSAFCGTDLELQLRMRGIHELHLVGVCTDICVLHTAVDAFNRGYRIVIHADAVASFNEQGHEWALSHFERTLGAAVYTAGQPTAEA
>NZ_CP048209.1|WP_162355536.1|1288860_1289634_+|NUDIX-hydrolase
MNDPIDEAANYSASRYRTPDGAPADIVIFTITSTERNTAKKSLPLRQLEVLLIQRKGWPFQGHWALPGGFSKETETLLDSALRELQEETGVADVHIEYFGAYSKPGRDPRGWMISHAFLALVHEHALANRSAADDASDVRLFPVQEALAMELAFDHREILEDALRHIRIKMLTTTIAKSFLPEEFTIGELYQVIEAVVPDFEEKNFIRKITSTRSRKGIIEEARDRKGELKQSNRHSQRAAQLYRFTDYVPRLSIYS
>NZ_CP048209.1|WP_162355535.1|1287898_1288351_+|HEAT-repeat-domain-containing-protein
MSQVEHTEEQITAEPSLEALKRAASRTANWRERLKAVEALRELGGETAVDLLTRLAQNDAVHQVQLAAHGALTELGVEAERPVKKTAELIKGTNKILLRIKKSLPAGHSYEAFKEKLRNMRSDVYDIYEGDKGEGFDEWLESTWSSLSGR
>NZ_CP048209.1|WP_162355534.1|1287412_1287763_+|hypothetical-protein
MNYEISIHLYDDWVDTVKVIFRGSGHPLPDHLTPDQAALAYFLQTAASQEEALRQRAENEERLHDIQQKLVDNFETVILPDLRSRTGYEGHAFAFKWVYNQGEHIIEEHSSYRIPL
>NZ_CP048209.1|WP_162355533.1|1286273_1286981_+|response-regulator
MTTGNGARILVVDDEPQIRKLLKVTLKAHQFDVLEAETGEDGIYQASVNYPDLIVLDLGLPDVPGMTVLRRIREWSRIPVIVLTAKDREADKIEALDGGADDYVTKPFGMGELVARIRVALRHAGNAQQEPVLRFGRLVIDLAQRLVELGGSRVKLTPTEYELLKALASNAGKVLTQRQLLQQVWGGHHHETDSHYLRIYIGHLRKKLEEDPTRPTFIETEPGIGYRFLLQEPAE
>NZ_CP048209.1|WP_162360308.1|1284697_1286272_+|DUF4118-domain-containing-protein
MPRRKVRSVETAVEQRRGRKLLQYAGTTAGVAALSAVLHEWGQPFDTVNIALVYLFPVLFSAVYWGLVPSFYAAAAGMLAFDYFFVPPLHSFSVADLRYLLSFAVYLAVAALTATLAARLKQQVKLSKEREAHTAALYALSRQMTAVGEIKALLDNIARQVSETVGAQIAIYLPGGRSELARTAWSPGDHAFGQGESAMVIAKWVLEHGRMAGRGTGTLGEFPGLFVPLRTEERTYGVIAVRADGETLSADTRRLLEAFGGLAATAIARVKLSEEAKLAQLTAESERIRTALLDSVSHELRTPLATIIGSATGLIEGDEVFSPADRLELLGTIRDGALRMNRLVTNLLGMVKLESGMLALRRDWVDAEDMIGVVLAQVKGFVGRRRIDVRIQEPAPYFPGDEVLLEQVLVNIVSNAIKYSPDGSDIVIAVRQSGSWVRISVADNGTGIADADRERIFDKFYRGSRTSGTTGTGLGLAICKGIVEAHGGTITAAPRAERGTLVTVALPAGDPEMPEGWQRQEEEV
>NZ_CP048209.1|WP_162355542.1|1301287_1302439_+|mandelate-racemase/muconate-lactonizing-enzyme-family-protein
MKITDIRTFILGNPWKNWLFVLVDTDEGVTGLGEGTLNGFAKTVEAAIHELKHLVLGRDPFDVETISLKLFRDVYSDGGQIQGSALAAIETACWDIMGKVTNQPLYKLLGGQCHDKLRAYANGWYRGPNTPDNFFEKAKLVAAKGYTALKFDPFGAAWRTVTRQDFAAALENIAAVREAVGPGVDILIEGHNRFSVSTALQFADAMLKYEPTWFEAPVPPHLITSMVEVAKRSPVPVACGEDYYSREQFAELLRHDAVHIIQLEPQFLGIAASKQVCGMVHAHNGVTAPHSAQGPVCSVVCSHLNMATPNFYLHEIFDEFNEPWEEQVLVPPLKVQNGYLTPPEGPGLGVELNLEEIDKHPYQVGNWLPLFKQGWEKRETVGE
>NZ_CP048209.1|WP_162355543.1|1302511_1303429_+|SMP-30/gluconolactonase/LRE-family-protein
MTQAIAGQFAHAAELLLDAKAVLAEGPHWNAAQGKLYWVDIQGMSFGRFDAVSGVNEQFQLDKTVGAVVCDADNGDVVYLTTRDGFERYDCGTGKLTGIADPEADKPANRFNDGKCDSAGRFWAGTMEDVEVTVAGALYVLDNDLSCRKAHENVGTSNGIAWNADETEMYYIDSMKATVTAFDYDAASGTIERPRIIIDFKNEPGLPDGMTIDAEGMLWIAHWGGWQVSRWNPRTGEKLDAVYVPAAKATSCIFGGDDLDVMYITSARIGLTPEELEEQPHAGGIFTYRPGVKGTPTHLFRASKA
>NZ_CP048209.1|WP_162355544.1|1303557_1304070_+|hypothetical-protein
MKKRTTSIALIVLGLTACLTTVSAGDNSYTPVKQTSDMITVYIHGIDVRDGQETLQVDPIQWFEGKAADEQFLKDEPDSGLNGAPDGYYIVNPEKNLETLEVDPQADVLMQIYDRTGNVLDATTEWNQSVSLEKFNAIYRNNAVVDVSDYPYHLTLKNGKVIRIVQQFVP
>NZ_CP048209.1|WP_162360309.1|1304195_1304738_+|hypothetical-protein
MFDPTIFDNLKVAVENYVYDLDNLDARVVVTHRVDRLELAVMAKVFALQFALAKGSGITADIRLEASLKDLAAEILEQEGVSPGCGVRIRFYMPVDDIETVCANVERTLTEIWQPDMPPTQMLSFLYGEDRSAQSYQNEIEVHFNRKINEGQMEDIPELIEHMVQSLEALEALGAAGKEG
>NZ_CP048209.1|WP_162355545.1|1305221_1305911_+|class-I-SAM-dependent-methyltransferase
MDNMNQVRSTFDATAGGYDAQRRKLIPCFDDFYGTAVSLADTEEARPRILDLGAGTGLLASMLLRKHPEARLTLIDLSDNMLSVAKERFSGREGIEYLCQDYTAYAAGESYDCIVSSLSIHHLPDEGKQAVYRNAYANLKPGGVFINADQVLGRTPFVDALYKEDWKRKIEASGLTRAELDAACERTKLDRMAGLEEQLAWLAQAGFSDVACVYQSFNFVVLYGRKRRG
>NZ_CP048209.1|WP_162355546.1|1306205_1307315_+|SH3-domain-containing-protein
MRNKWIGLALMLVVLISGFGLRSHDVSATTKVPYQAKVGTDTLNIRSEPALQASVVGQLKEGAVVTVTEEEEDGWVQVKNNRLTGYAAGYLLRRTDNSGQTAGTSSSTGGKVSTSPGSTATVTADSLRIRSGPGTDYKVIGSLKEGQQVTILSSQSSWLKISTSSKTTGWIAKEYVDKGAPLQTHSSGTGIRGKLIVVDAGHGGNDPGKIGTTYETQEKDLTLPTAEYLKQELTRLGAKVVMTRTTDVKPSLADRVHVSEANHADAFVSIHYNSSETKTSGTLTFFYSETKDRPLANAIAAELSKAGSGLRSNGVSFGDFYVLRENSMVSTLVELGFLSNAKDESIVRGSAYQKSAAAAIARGLADYFD
>NZ_CP048209.1|WP_162355547.1|1307572_1309876_+|acetyltransferase
MPKPIGSSRYIPGLDGLRAIAVIAVIAYHLNLSWVPGGLLGVGIFFVLSGYLITDILLKQHARDGKLDLRDFWIRRARRLLPAMMIMLALVSAWLLVTDSARLAAMKGEIVSALLYFSNWRLIFHNVSYFESFGPPSPLGHLWSLAVEEQFYLVWPLLLVFLIRAVKRRGWLMVMILAGAAVSAGAMAWLYVPGLDPSRVYYGTDTRAFGLLIGAALAVVWPSWKLSASVSRRGGMAVDAVGTAGLAVVALMIATVGEYDAFLYRGGMVVLSFATAAVVAAMAHPASRLARAIGSKPLQWLGARSYGIYLYHYPVIALSTPQAQVDEFHPLRALLQVLASIALAELSWRYVEEPIRHGAIGKLRSRMSEGFRGRRTGRSRVMMFACIGVLAIASVSCSSQHNLVLGDNGGSQTADGSHGGSNSGIIDTGTQEGAAGAAGSAHEDGKDGGAGSGAAGGDAAGNGTGAAGTGGAGDVTQGGSGGGSAAPDQSAAQGGSAGSADGAGAAESGTDGAHGSGGSAGSAGDGAPGGSSGSSDAGSGAGTGSGSSGGADQGSAGQGAGTGASGSTTGSGGTTGSGSTAGKPDTSGGNGTKPPANAGSGANSAKPPAELPIAKDGITVIGDSVILDAKPYLEKLIPDIVVEGKVGRQMAQADDVIADLKQRKQLGKTVVIELGTNGSFSQKQLDQLIASIGGDRTIYFVNTRVPRKWQDVVNDMLTDTVADTANAKLIDWYTASKGHEDFFGKDGVHLKRSGGEFFANMIVSSLQ
>NZ_CP048209.1|WP_162355548.1|1310477_1310843_-|hypothetical-protein
MAAYPGPVFEPFCEVNLLSGMPDYRGFLVPLLELLDDGRPRTMQAIFDGLALALNLSASDRSELVQCGRQYTYKNRIIAARTYLLRARFIAYATNDAIIVTEQGRRFLSASLPRSYSSPVT
>NZ_CP048209.1|WP_162355549.1|1310973_1311420_-|carboxymuconolactone-decarboxylase-family-protein
MELRMVHGKVNPAAYQAMMKLEGFMETTGLDPILYELIKIRSSQINGCSFCIDMHTKATRKLGETEQRIYLISVWRETPFFTAKEKAVLELTEALTRISEGGVPDELYDKVMEQLTAQEYVAVIMAVNTINAWNRLAIATNMYPGCLD
>NZ_CP048209.1|WP_162355550.1|1311481_1312459_-|sigma-70-family-RNA-polymerase-sigma-factor
MDYKDQLEHLNHPDRRMQPNEPNRLDLESAYRMHKPLLLRVAYRLLGTVQEAEDAVQDTFVALQSLHAAAIEYPKAYLVRAVTNHAINAAKSARRQRETYVGPWLPEPLLSDGSATAASGDPAENVLRQEQFGYAWMVMLEQLSPPERAAFVLRETLHYGYEELAGLLGRNEAACRKLYSRAKAKLAAFETAGKARNCETGADEGAAFVAAFMAASQHGNFEPLVRLLTDDAVLVSDGGGKVRAALRPIRGKARMLAFFRGIRAKGALQGELLPVSINGQPGLLLRQPDRPDIAICYRSTPGGKLDGVFMILNPDKLAHVRLFGA

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Crispr_ID: NZ_CP048209_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_8

1570152-1570230

Orphan

Consensus_repeat	Method
TTTTTGCCGGTCAGAGGCAGGAAAAGT	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP048209_8

>merge|NZ_CP048209|8|1570152-1570230|CRISPRCasFinder
TTTTTGCCGGTCAGAGGCAGGAAAAGTTGCTCGAACAGCAACTTTACCGGCATTTTTGCCGGTCAGAGACAGGAAAAGT

>NZ_CP048209|8|7|1570152-1570230|CRISPRCasFinder
TTTTTGCCGGTCAGAGGCAGGAAAAGT	TGCTCGAACAGCAACTTTACCGGCA
TTTTTGCCGGTCAGAGACAGGAAAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162355747.1\|1577826_1578453_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP048209.1\|WP_162355734.1\|1560770_1561862_+\|beta-lactamase-family-protein	unknown	unknown	gnl\|CDD\|365903
NZ_CP048209.1\|WP_162355731.1\|1558226_1559063_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162355739.1\|1567648_1569757_+\|penicillin-binding-protein-2	unknown	unknown	gnl\|CDD\|274573
NZ_CP048209.1\|WP_162355738.1\|1564997_1567079_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP048209.1\|WP_162355730.1\|1557320_1558214_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162355743.1\|1572956_1573457_+\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP048209.1\|WP_162355732.1\|1559059_1559539_+\|DUF386-domain-containing-protein	unknown	unknown	gnl\|CDD\|377217
NZ_CP048209.1\|WP_162355746.1\|1576095_1577478_-\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP048209.1\|WP_162355737.1\|1563953_1564751_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162355742.1\|1572225_1572960_+\|phosphosulfolactate-phosphohydrolase	unknown	unknown	gnl\|CDD\|224956
NZ_CP048209.1\|WP_162355740.1\|1570413_1571601_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP048209.1\|WP_162355735.1\|1562151_1563357_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP048209.1\|WP_162360334.1\|1573528_1573999_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP048209.1\|WP_162355748.1\|1578459_1580052_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048209.1\|WP_162355744.1\|1574166_1574385_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355741.1\|1571730_1572180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162355736.1\|1563426_1563708_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|223713
NZ_CP048209.1\|WP_162355745.1\|1574538_1576077_-\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP048209.1\|WP_162355733.1\|1559566_1560661_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162355734.1\|1560770_1561862_+\|beta-lactamase-family-protein	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.5592e-56
NZ_CP048209.1\|WP_162355731.1\|1558226_1559063_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	8.43652e-80
NZ_CP048209.1\|WP_162355739.1\|1567648_1569757_+\|penicillin-binding-protein-2	gnl\|CDD\|274573	TIGR03423, pbp2_mrdA, penicillin-binding protein 2. Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	2.17305e-118
NZ_CP048209.1\|WP_162355738.1\|1564997_1567079_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	1.04139e-116
NZ_CP048209.1\|WP_162355730.1\|1557320_1558214_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.41003e-76
NZ_CP048209.1\|WP_162355743.1\|1572956_1573457_+\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	2.94863e-59
NZ_CP048209.1\|WP_162355732.1\|1559059_1559539_+\|DUF386-domain-containing-protein	gnl\|CDD\|377217	pfam04074, DUF386, Domain of unknown function (DUF386). This family consists of conserved hypothetical proteins, typically about 150 amino acids in length, with no known function.	6.60398e-40
NZ_CP048209.1\|WP_162355746.1\|1576095_1577478_-\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	7.94063e-81
NZ_CP048209.1\|WP_162355737.1\|1563953_1564751_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.28486e-23
NZ_CP048209.1\|WP_162355742.1\|1572225_1572960_+\|phosphosulfolactate-phosphohydrolase	gnl\|CDD\|224956	COG2045, COG2045, Phosphosulfolactate phosphohydrolase and related enzymes [Coenzyme metabolism / General function prediction only].	6.80773e-25
NZ_CP048209.1\|WP_162355740.1\|1570413_1571601_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	6.29355e-100
NZ_CP048209.1\|WP_162355735.1\|1562151_1563357_-\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	1.03698e-84
NZ_CP048209.1\|WP_162360334.1\|1573528_1573999_+\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	4.75222e-14
NZ_CP048209.1\|WP_162355748.1\|1578459_1580052_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.32763e-82
NZ_CP048209.1\|WP_162355747.1\|1577826_1578453_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	2.97761e-11
NZ_CP048209.1\|WP_162355736.1\|1563426_1563708_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	4.67545e-13
NZ_CP048209.1\|WP_162355745.1\|1574538_1576077_-\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.99754e-12
NZ_CP048209.1\|WP_162355733.1\|1559566_1560661_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.47699e-55

>NZ_CP048209.1|WP_162355739.1|1567648_1569757_+|penicillin-binding-protein-2
MRPQDDDAKSQENRKRNGFTLRLNMFFGMTFIVFSILIVRLAILQFVDSPKFQEQLNDNGTRSVKIPPIRGNILDSQGVQLAYSTSTQSLYYTIQPGLKDADADKLAQQLFDIFAKYGDPAQSLTVKEIKKRMDLAHIQNTYAVPRRIKMGLSEKEIAYFSENRELYPGFDIMEESVRNYDKDDVAVQLIGYLKKYRGVRESMNKYKNIADQEDAKLQYLDDEDVGVDGLEYMYQDVLRGENGLKEYPVNAKETIIGPPEITVPVKGDNLFLTIDKRVQMMTQQAITDHLAFMKTAPGYYRDGADATTGYAVAMEVKTGKVVAMASMPDYDPSVWSGGSISPEDYAKTTYFQANGTIRQAYPPYDDEKERNRHPSSMVPLGSTQKPLSVLIGLNEKLFTTHDVYRDTGVFYFGKSKPQVAIHDSQGHAYGNIDAADAIAHSSNTFMASEVGNKLYQKYKGIKGVDVWDDYVKQFGLGVLTGSGLLGESKGVIDYYHEAETASSQSALIRASFGQQAKYTTLQLAQYAAMLGNQGKRLQPQFVNKIVDQDGKTVQSFMPKVLNTVTFPQEYWDEIYNGMSRVSVQGFEGFKYNFLRKTGTSEQDVGDRKKVENSVFIALAPAEDPVLAVAVVVPDGGFGAYGAAPIARKIFDAYDEYVGLDGTPHPKPDDTAAGTGGTAGTGTAAGAGTGTGAATGGATNKQQ
>NZ_CP048209.1|WP_162355738.1|1564997_1567079_+|FAD-dependent-oxidoreductase
MITDRHYEIIVYGATPGGIGAAVAAARRGRRTLLLEPSPYIGGMMTSGLGRTDIDWLDASGAIYREFAHRVEAHYTAQYGTASPEAEACNRGMFFEPSVARAILEDMLAAESRLTLVRRSELLSAEAVDGRLTAIAIETEAGEGEWQGRSALSADVFIDGTYEGDLAAMAGVPYEVGRESRDEWNEEYAGVLYMNFGPSKEVLPGSTGEGDDRIQAYNYRLCLTDVPENRVAPGKPASYNREEYASLSVDAAEGRVRSIRDVLNILPVPGGKTDTNNHHYCMCSSDLPEENGTYLEGGREERQRVRDRHRHYYQGLLWFLQHDESLPEAFREDAQRWGYAADEFADTDNFPPQLYVREGRRILGEYRFTENDARLAPGLGRSPIHADSVAVGAYAIDSHATRKREAAGRNVALEGFLGLGWLTEVYQIPYGVMVPLGVDGLLVPVAVSATHMGLGTIRMEPCWMQLGYAAGVAADLAIAGGAAPRDIPIDNLQDELLAADQLIGFYRDIDASGLMGKAIQYFGAKGAFRSYEARPDEPLTVERASALLALARLLPGGSRFPALPAAGAVLPAGADMGPRLPREEPSPAAYWQRHPLLTQGLAGRWLQAAGRALSAGTAGAAGGSVSASAAARASSPAAAWLRTDSAAAAEGGPSASGGAGEAAPAVSVGEWCALLYGLLLEARRAGSSGSGGR
>NZ_CP048209.1|WP_162355737.1|1563953_1564751_-|helix-turn-helix-transcriptional-regulator
MEYPLQVGFHHYSVNKPRFVLPIGRDDDHWLLFALTHGHFRYRIAGIEGTAVPGDVIVCPPGIDVRREALAPLTLHYAGVQPTSGEALLPTPREFGSGGPYRFAVRDTKRHYANLRRIAAVSGRRDAMSALRLCHGLSDLWLQLQEELEDRLQAASAPPDSTMQAVRREIEARAFDDGRLQDIAAGASMSRTVMTKRFKAAYGMTPQQHVNALRLSRAKQLLIHTDYTLDHIAGLCGYDSGSYLSRVFHDAEGARPSEYRRRNRL
>NZ_CP048209.1|WP_162355736.1|1563426_1563708_-|helix-turn-helix-transcriptional-regulator
MVEDNEEIKQAVKVYKALGEPTRIKIAMLLTEEKTLCCSDIGSKLESVAGSTLSHHLKQLTDCGLLSLRKDGTYIYYSVNKEVARKYAPYLLG
>NZ_CP048209.1|WP_162355735.1|1562151_1563357_-|MFS-transporter
MSTTLKIYMLAIVSFLVGTSEFIIAGILDQVSSDIGVSVAAAGQLITVFSLAYGFGTPFLMAAASRVDRKRLMLYALAVFVLGNAAAFVLPGFGALIVSRIIVALSSGVFVVTALTVASKLAPPEKQGSAIATLVMGFSTALIVGVPLGRLAASVYDWKAVFGAIALLGLFALLLIATAIPKTDNELPVPLRQQLLLLKNPKIAVGLGITFFWIGGYAIAYTYMSPFLLDITGMSGGTVSIALFAFGVASLIGSQLGGYATDKWGYRPTLVGGMLLHAVWLIVISFAAHSPSLMFPLLMLWSFSAWSSGPTQQYHLITLAPGATSIMLSLNSSVLQFAMAAGAGIGGVIVEGSSLTAITWIGAAGVAVAAAMAAGAFGYFRAGAGGRLPRKEETQENKASA
>NZ_CP048209.1|WP_162355734.1|1560770_1561862_+|beta-lactamase-family-protein
MKDIQQHMQAFLERMVDEGRERGVQLAAYYEGQLIVDASAGIADRRTGQAVDGSTIFPVFSTTKGIASTVLHHVMERQGTDYDLRIAELWPEFGVHGKERATIRHALSHTTGIPHMPEGVGLAEVVDWDRMTAETAKLVPQWPPGERMEYHAITFGWIVGEIASRLDGRPFARILKEDICDPLGIQAELFVGIPEEAEARVAFLEEPGFDPSAFPATGLQAIPAWICPLADWMNRSDARRACVPASNGIMSARAIAKHYAALLQDGADGIRLLPESRIRLATALQDLPNQEPQYKGLGYQVGSPGSIMGGASAFGHGGYGGSNGFADPERRLAVAYVNNLYTPQSAGTAIIHELKKELGIAID
>NZ_CP048209.1|WP_162355733.1|1559566_1560661_+|Gfo/Idh/MocA-family-oxidoreductase
MKELGFGIVGCGYFGAEFAAILSDMEGARLVAVQGGSGASAKAVAERHGCLYIEELEALCQHPDIDVVLVVSPNHYHKEPVLLAARNKKHVFCEKPIALSLADCKEMVAACREAGVLFMAGHILHFMHGIRKVKGMIADGVIGKPIVAHGERTGWENKQQTVSWKKKKEMSGGHLFHHIHELDIIQSIMGPAERVAMSGGNLAHQGEGFGDEEDVLMLSLEFPGGAVGTMQYGSGFHWGEHYVKINGTLGALYLDFKDSRILVRKDDRVIAYDMHETPEENEERRAQYVKLEGGIVYGNPSVRPPLFIRKAMIAEMVFLRDAILGAEIPAEWAGLLDGSAALGSVATAETADRALQAGAWMAPA
>NZ_CP048209.1|WP_162355732.1|1559059_1559539_+|DUF386-domain-containing-protein
MIIGNIGQLDADRAFLHPALVRALEELRSGACADPAANGRHDILGGEMYVIVSEVCGSPSEEKPFERHERYIDIHYVLAGSETIGWLPLAEGGAPYADELDASDYALYLPQGSEAYELPLRAGQYAVMFPHDLHRPGNTGGAIARKAVVKLHVDLFAVR
>NZ_CP048209.1|WP_162355731.1|1558226_1559063_+|carbohydrate-ABC-transporter-permease
MTMKPMLDRTLKIAANVVLYVAAGLFIFPLYWMATGSFKNQTSSLKFPPELFPSSPVLANYRNLIKAGDVFYWLFNSVFVSTVASFLICLICAMAGYALTKRKFAGASAAFGIIVIAMFIPKQITLVPLFSMMRGLGLVNHLSSVILPLLALPFGVFLMKQFSQAVPTELLEAGKIDGCTEIGLFFRIFLPIVKPATGALAIFAFTTVWNDYLWQLIMLSGPHKMTINVGISSLISEYNAQYGLQMAAATIGFIPVFIVFIAFQKHFVKGITLGGVKG
>NZ_CP048209.1|WP_162355730.1|1557320_1558214_+|sugar-ABC-transporter-permease
MRRIGSLPVAGLRNHAPGLLFIAPFAVLFLLFEVYPLLNALYLSLFDYGLGRKSWAGLSNYTYLLHDHVFLVSVANTFGFVIGSVPVVLVFSLFAALLIFNKNKHLASFFRGAFYLPLVTSQVILSIVWAWIYNPVNGVANYALSLAGMEPVAWLADGRFALGALIVVVISFNVGQPIVLLLAALGNISPDYYEAADIDGASPARKFWHITLPLLKPTLLYVMVMATIWAFQTFVVVQMLTGGGPNYKTSTVMYLLYNTAFVYGQLGLASAMGVVIAVLIAIVAALQFKLMRTNLDG
>NZ_CP048209.1|WP_162355740.1|1570413_1571601_-|IS256-family-transposase
MNTIPEMALSNLFENAVTQFVKDNLESIMRAEIKQFMEDAPEGHPNSRNGYYRRSLHTKYGNIEDLSVPRDRNGEFQTQMFEPYQRRDGWLEEAVIQMYKSGMGTRDVARFIEGMFGSHYSPTTVSNITATVLEDIQNWQQRPLQKRYSVIYLDGLYVKLKRRTVSGEVVYFAMGIDEEGHRQILGFYVGGQESANGWRDVLKDLYSRGVQEVLLGVFDGLPGLDTAFRETYPKADVQHCVVHKVRATFPKIRVQHRADFLDALKTVYNAPDHELALAEFDTLKAKWDKLYPKEIKAWEEQLTTLLTFYKYPSLIKEAIYTSNPIERMNKEIRKRLKPMNSLTNMDAAEKIIYLELTDYNERFETRVIRGFGDPVVKKKLTELFNKRYPPNTGAE
>NZ_CP048209.1|WP_162355741.1|1571730_1572180_-|hypothetical-protein
MFTVIGCYKLELGVHSTLRLFSIPLHSGMAKRFPVGSVVHGGLGTTALPALDHFSGRIGIGEKGNLNHKIAVRDRTSAAAAAYSGPAAVALQNGEKSKSCYTSNFIRVRPAKMPVKLLFEQLFLPLTGKKAGKVAVRATFPASDQQKCR
>NZ_CP048209.1|WP_162355742.1|1572225_1572960_+|phosphosulfolactate-phosphohydrolase
MFHQTPYRIRFEWGAEAVRRLAPLSGAVVIVDVLSFTTCVEVAVSSEALVFPYGHKDESAAAFAESVHAVLAGKRGTTPSLSPSSLRALPLHSRIVLPSQNGSACTLIAQAAQAATIAGCLRNAAAVADYIDRHHPGEIVSVIACGEQWAAGGLRPAIEDMLAAGAILSRFDPSDLSPEAGMAVAAFRSAEHDIGQTVLACSSGRELIEKGFAQDVALAGELNVSGTVPVFQHGAFGPRKRGEA
>NZ_CP048209.1|WP_162355743.1|1572956_1573457_+|shikimate-kinase
MNIVLIGMSGAGKSTLGVLLAKALGMDFVDTDIVIQQQEGRLLQDIIDRDGIAHFMAVEERIVSGLRLDNSIVSTGGSVVYSEQAMHTLRQGGRIVYLHVPYEEIERRIGGMAARGIVMKSGQCLRDVYDERMPLYVKYGDMTVDCTNKAIESCVGEIIACIRERA
>NZ_CP048209.1|WP_162360334.1|1573528_1573999_+|NUDIX-hydrolase
MFYNFTRSGWIGSSSCCRCHCSRGQRGAVSNKYGWSLPKGSLERGETFLKGAEREAFEEAGIEVIAKEAAFVTEYTSEKYGQYLQVYYEGSARAGQIECSADPDDDINQARYVRLADLRSFITFRPWIIPLEHWVQHKEMKYYSFDLDVEGFHIPE
>NZ_CP048209.1|WP_162355744.1|1574166_1574385_+|hypothetical-protein
MTRYLFEYEVPSTGKKATFSWIGKSEEEARAAVHAKVADFEFMELDDIVVGKVLEAKETTGNQYYECEGCSA
>NZ_CP048209.1|WP_162355745.1|1574538_1576077_-|copper-amine-oxidase-N-terminal-domain-containing-protein
MQTPNPAPIHRPNAAQPPVRGAAAQPARATAKAAKRMLAWTALFAVGFALLASLVTYAADPLQFYHKPFGYRPVFSSEQRYQNPGLALHYDYDTIIIGTSMTENFLPSEVDKALGGKTLKLSIRGSTADEQYKIAKLAIETGKVKRVLWGLDYFALKTGDQDAAGPFPDYLYDDNRWNDYRYLLNYSVYGQFFKGIFKRVTGSAPQSLETLYNWNDSVRFGKKLVLKDYRSAANEEAYFGLNEEPLDVIKSHFETQVLSLAKAHPEIDFIFYYPPYSVLREAVWAATNEARFGNQLAMDVWMFRQFDALPNAKVYDFQTAGEWTYDLDLYKDLSHHNQDVNSAIAAAIGRDDPRYRMTKENAQSLSDELAQQVRTLAMTEAGDPKSVRVYAGGGKTAPPEASFSSRIIPGQGELLVPAKEAAALLGATFDWNQSAKMLVMAHGSARVTLTLDKPAAGTGDGGKVELAYPARLVGGKLHVPLLQLAELLGFRVDAEQPNGWSLQYTLTLQAAK
>NZ_CP048209.1|WP_162355746.1|1576095_1577478_-|MBOAT-family-protein
MLFNTYVFIFAFWPISVAVYFILNRFRFTFAAKCWLTFSSLFFYSWWNVRYLPLILGSIAFNYLFGRLIQAGAGTKRGKPLLVAGIAGNLLLLGYYKYADFFLGALSDATGHAFPVLRLILPLGISFFTFTQIAYLADAYKGKASEYNLVSYMLFVTFYPHLIAGPILHHSEMMPQFDRLRNKVWQWANASRGAYIFCIGLFKKVVIADTFANAANDGFAGATHFIAAWTASLSYTFQLYFDFSGYTDMAIGAALVFNIKLPQNFNSPYKATSIQDFWRRWHMTLSRFLRDYIYIPLGGNRRGEAVMLRNLVVTFLIGGLWHGAGWTFIFWGLLHGLGQVVHRFWGKFGRPLPVWLAWFVTFMFINATWVFFRADSWGQAMRILKGMAGLQGVSLADVKTLLPTLLLIALFLPIVLALRNSSQLSETFRPTRRMAAAVAALFVFSLLYFNRISEFLYFNF
>NZ_CP048209.1|WP_162355747.1|1577826_1578453_-|PadR-family-transcriptional-regulator
MSMKLLILGLLMERERHPYEIRQTIKLRNWNECFKLRDGSLYYAVDQLRQDGLIEAAEVVSVPGENRPDKTIYRITDSGREAFLQLLQEQFKHTSYPQHPLFLAMPFVRHGSSDLIEALVLKQLEDCETRLARMKFIMELKGSLIPRGSSLMIEGFIRFGETERAWLQQLLEETRSGKLFEPHKMTTEQLEAYVIQLKEFEKSDSGGE
>NZ_CP048209.1|WP_162355748.1|1578459_1580052_-|MFS-transporter
MDAKRSNVKLVIAGLLLGLFIAALDQTIVSTAMGTIIKKLGGLDKFVWVYSAYMIAMVVATPIFGKLSDMYGRKKFFLTGLILFMLGSVLCGTATNMEQLIIYRAVQGIGGGAIMPIVFTIIFDLFPAEKRGKMMGLFGAVFGISSVFGPILGGLITDNISWRWIFYINVPLGILAVLFILNAYHETKNTRKQSIDWLGAVMLTGFVLFLMFGLELGGTDGWAWSAAKTILLFVASALFLMAFLFVELKVKEPIIKLSLFKNKIVTSSMGISLLYGGVMIAAASYIPLFIQGVFHKTATQTSTVMIPMMLGVVLSSQVGGRVVTKFRYRDVMIVSALMLILGTALLGFAMTNESSRLVISLFTVIVGLGMGVSFSLLNISTLNAVPPQYKGTSSSLITFFRTIGSALGIAVFGAIQKSSFQSNISEVPNLNPQLAEKIKGGQALLDPDIQKQMGLPGDLANKLLDQFAHSVIAIFQWAVILPVVAIVFVLMMGRARMEVNKAGQQGAPAADAPGRPGPQDDKGKPSYQGR

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Crispr_ID: NZ_CP048209_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_9

2055751-2055852

Orphan

Consensus_repeat	Method
TGGCATTATGCTTCGCACAAAACTTTGAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_9

>merge|NZ_CP048209|9|2055751-2055852|CRISPRCasFinder
TGGCATTATGCTTCGCACAAAACTTTGAGGCTGATGCTTTCGAAGCGAGTTTTGTATTCATTGCCGTGTACTTGGCATTATGCTTCGCACAAAACTTTGAGG

>NZ_CP048209|9|8|2055751-2055852|CRISPRCasFinder
TGGCATTATGCTTCGCACAAAACTTTGAGG	CTGATGCTTTCGAAGCGAGTTTTGTATTCATTGCCGTGTACT
TGGCATTATGCTTCGCACAAAACTTTGAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162356109.1\|2062375_2063191_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP048209.1\|WP_162356100.1\|2041698_2042613_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP048209.1\|WP_162360381.1\|2060453_2061623_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234988
NZ_CP048209.1\|WP_162356112.1\|2065946_2067554_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP048209.1\|WP_162360378.1\|2047145_2050862_-\|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	unknown	unknown	gnl\|CDD\|236505
NZ_CP048209.1\|WP_162356104.1\|2053965_2054814_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NZ_CP048209.1\|WP_162356113.1\|2067972_2068866_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP048209.1\|WP_162356101.1\|2042736_2044263_+\|helicase-DnaB	unknown	unknown	gnl\|CDD\|226138
NZ_CP048209.1\|WP_162360377.1\|2044302_2045262_+\|primosomal-protein-DnaI	unknown	unknown	gnl\|CDD\|236353
NZ_CP048209.1\|WP_162356107.1\|2057012_2057225_+\|YezD-family-protein	unknown	unknown	gnl\|CDD\|378371
NZ_CP048209.1\|WP_162356105.1\|2054837_2055707_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP048209.1\|WP_162356108.1\|2059713_2060382_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP048209.1\|WP_162356103.1\|2051250_2052270_-\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
NZ_CP048209.1\|WP_162356106.1\|2055862_2056927_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP048209.1\|WP_162356111.1\|2063730_2065851_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP048209.1\|WP_162356110.1\|2063388_2063535_-\|YqzM-family-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360380.1\|2057349_2059587_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP048209.1\|WP_162356102.1\|2045450_2047052_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376626
NZ_CP048209.1\|WP_162356099.1\|2041277_2041583_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379451
NZ_CP048209.1\|WP_162360379.1\|2052792_2053941_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162356109.1\|2062375_2063191_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.37533e-12
NZ_CP048209.1\|WP_162356100.1\|2041698_2042613_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.14844e-13
NZ_CP048209.1\|WP_162360381.1\|2060453_2061623_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234988	PRK01889, PRK01889, GTPase RsgA; Reviewed.	9.69181e-167
NZ_CP048209.1\|WP_162356112.1\|2065946_2067554_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.62738e-09
NZ_CP048209.1\|WP_162360378.1\|2047145_2050862_-\|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	gnl\|CDD\|236505	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase.	0
NZ_CP048209.1\|WP_162356104.1\|2053965_2054814_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	8.53985e-144
NZ_CP048209.1\|WP_162356113.1\|2067972_2068866_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.38033e-42
NZ_CP048209.1\|WP_162356101.1\|2042736_2044263_+\|helicase-DnaB	gnl\|CDD\|226138	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].	1.05423e-16
NZ_CP048209.1\|WP_162360377.1\|2044302_2045262_+\|primosomal-protein-DnaI	gnl\|CDD\|236353	PRK08939, PRK08939, primosomal protein DnaI; Reviewed.	2.9586e-84
NZ_CP048209.1\|WP_162356107.1\|2057012_2057225_+\|YezD-family-protein	gnl\|CDD\|378371	pfam10055, DUF2292, Uncharacterized small protein (DUF2292). Members of this family of hypothetical bacterial proteins have no known function.	1.1298e-14
NZ_CP048209.1\|WP_162356105.1\|2054837_2055707_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	8.11452e-152
NZ_CP048209.1\|WP_162356108.1\|2059713_2060382_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.3408e-14
NZ_CP048209.1\|WP_162356103.1\|2051250_2052270_-\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NZ_CP048209.1\|WP_162356106.1\|2055862_2056927_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	6.36988e-129
NZ_CP048209.1\|WP_162356111.1\|2063730_2065851_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	2.19551e-161
NZ_CP048209.1\|WP_162360380.1\|2057349_2059587_-\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	4.14035e-78
NZ_CP048209.1\|WP_162356102.1\|2045450_2047052_-\|hypothetical-protein	gnl\|CDD\|376626	pfam01835, A2M_N, MG2 domain. This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin.	1.82643e-07
NZ_CP048209.1\|WP_162356099.1\|2041277_2041583_+\|hypothetical-protein	gnl\|CDD\|379451	pfam14068, YuiB, Putative membrane protein. This family of bacterial proteins is functionally uncharacterized. Proteins in this family are approximately 100 amino acids in length. There is a conserved FGIGF sequence motif, and many members are putative membrane proteins.	2.36044e-25
NZ_CP048209.1\|WP_162360379.1\|2052792_2053941_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0

>NZ_CP048209.1|WP_162356105.1|2054837_2055707_+|sulfate-ABC-transporter-permease-subunit-CysW
MAGAVTVHLAEKTARPKHITESLVVRIVLTAIALLFLGLVVVLPLLSVFIEAFKKGTDVYFAALRDPDALSALKLTLLTAVIAVPLNTVFGVAAAWAISKFRFRGKNVLITLIDLPFAVSPVIAGLVFILLFGAQGFLGPWLDNHNIQIVFALPGIVLATTFVTFPFVARELIPLMQAQGVQEEEAAASLGAKGWQIFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHIEILYNEYQFSASFAVASLLVMLAVLTLIVKSFIEWRTAKQLPK
>NZ_CP048209.1|WP_162356104.1|2053965_2054814_+|sulfate-ABC-transporter-permease-subunit-CysT
MTSSAKKRTKPRSVLPGFGLSLGFTVFYLSLIVIIPLIGIVVKTTGLTPEQFWKTVTNARVLASYKISFLTSFFAALVNLVFGLLIAWVLVRYKFPGKKLIDSLIDMPFALPTAVAGISLTAIYAPNGWVGKLLEPLGIKVAFTPLGITLALIFIGLPFVVRTVQPVLQDLDHEVEEAAVMLGAFRLRTFRRVVLPELIPPLLTGFALAFARGIGEYGSVVFISGNMPMKTEIAPLLIMTKLEQFDYRGATAIALVMLVVSFLLLLLINYLQWRSNRRVVTT
>NZ_CP048209.1|WP_162360379.1|2052792_2053941_+|sulfate-ABC-transporter-substrate-binding-protein
MKKRTFVPLKTLMILVAFAIALTGCGWDSGPNEKSGTNGAANQSGTNGKTDANASNGNAAEPASTNGDGSKKSVELLNVSYDPTRELYEAYNKLFADYWKQEKGQDVTIKQSHGGSGAQARAVIDGLKADVVTLALGYDIDSVADKGLLASDWQQKFDNNSSPYTSTIVFLVRKGNPKGIKDWDDLVKKGVGVITPNPKTSGGARWNYLAAWGYALKKNNGDEAKAQEFVKALFHNVPVLDTGARGSTTTFVEKGIGDVLLAWENEALLSKKQLGDKFEIVYPSLSILAEPPVAVVDKNVDKKGTREVAEAYLDYLYTEPAQQVIAQNFYRPQLASVAEQFKDQFPEIPMLNIDDDFGGWAEAQKKHFSDGGVFDQIYTPGA
>NZ_CP048209.1|WP_162356103.1|2051250_2052270_-|sulfate-ABC-transporter-substrate-binding-protein
MKRKLLIVFTVITLILSLSSTSFAASAKTTKKDVTLLNVSYDPTRELYVQFDKAFASYWKKKTGQNVTIKQSHGGSGAQARSVIDGLEADVVTLALAYDINEIQRAGLINDGWQSRFAKNSSPYTSTIVFLVRKGNPKKIKDWSDLVQKNVSVITPNPKTSGGARWNFLAAWAYALKHNNHNEAKATDFVAKLYKNVPVLDSGARGSTTTFVERGIGDVLLAWENEAYLALKEHPKDFEIVTPSYSILAEPPVAVVNKNADKHGTRDVAKAYLDYLYTNEGQEIVAQNFYRPTNLAVAAKYAKQFKSLELTNIKNFGGWDSAQAKFFNDGGVFDKIYKP
>NZ_CP048209.1|WP_162360378.1|2047145_2050862_-|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase
MASVVVTPGSVSHAGDESVVFELFDGNVPVGITALTKDITSPEKVTAHFNRTGSQLYVKVFVVDKYGGSLTEVGTSLADPITIDDTLQLRIMETTDIHTNFMNYDYYKDAPSDTVGLVKTAALIKQSRAEATNSLLVDNGDLLQGTPLGTYMAKIQPLADKQVHPAYKAMNLLGYDIATFGNHEFNYGLDYLDEAIDDADFPYVNANVYVDDHDSNPDNDVNKYKPYIIMNKTFKDASGREQTVKVGFLGLVTPQIMDWDKDNLSGKVITKDIVATAQKFVPQMRAEGADIVVALTHSGFNGSAVAGASSEDAVYPLSKVPGIDAITFSHTHKIFPATSVSTLDALFKDASGNPLPGVDNAKGTINGVAAVQAGFGGANLGIIDLTLKKADGKWQVVNSQSQNKYIYDTVNKKPLVDADPAIVDAIKAEHEATIAYVNQAIGDTTAPIYSYFALVQDDPSVQIVNQAQKWFAEQTLASSDSPDKSLPILSAGAPFKAGRNGPSEYTDIKKGSLAIKSASDLYLYDNTLKAVKLKGSDIKEWLEMSAGMFNQVDPAKSGEQPLLNPSFPVYNFDVIDGVTYRIDVTKPAKYKADGTVNDGTSSRIADLKYNGQAIDPNQSFIVVTNNYRAGGGGNFPGLKGAPIVIDSATENRQVLMDYITAQHTINPSADGNWSIAPIAGDLNVTFTSSPAAAPYLAENPQITSLDRTDDKGFNVFKLDVSGSHAPQPGGGEGSGNVNVQLLGINDFHGQLDFSDIDKASGKTVGGVDYLSAYLKQYESQNPANTLLIQNGDSVGASSPVSALERDKPTLDWLNYMGFDVGTLGNHEFDQGVPALMAQLNGGQDPINTSVAYAKANMDYVNANVIDKTTHQPIIAPYVVKEVGGEKIGFIGVVTMLTPSKVSPAALAPVDIVDQAPVVNAAAAELKAQGVKAIVVLAHDPATQKDGVITGEAADLANAVDDEIDVIFSGDNHVKVNGTVNDKLIVQSASYGTAFSDVDLEIDPATHDIVKKSAKIVDVFHDGITPDAGAAGIVQASLTRHPELLEPVGTTAAVIAKENAYTQEIALGSLIADAMKDAMQTDFAFMNPGGIRADLPKGTIVYSDLFRIQPFGNQLVKMTLTGAQIKTLLQQQWGAAAADTKTLQISGLKYTADFSKPIGERVVSLTKEDGTPIEDNTAYTAVVNNFMAAGGDNYTILTQGTNQQAGISDIEAFYNYVLNTFDHGTITASVKGRITNVNL
>NZ_CP048209.1|WP_162356102.1|2045450_2047052_-|hypothetical-protein
MKRKVLIAALALASGITMALPSAVPTAAYAAEASATVQTGTSIDAVPTRYAGDTVTISGATDAADVIIKVLDPDGTVLFFDIAASSGGRFQDSFKLSSSAPAGTYKIAAGQGTNVASATFSVASSSGGGGNGVGNGGGGSTTTSGGGGNTGTGPTDNAAVQIHFALSDLPAPVGGIVTLDTAGQLGGGGGGNVEVLLPAAISQSLGGGSLRILLPNGSVTLPKDVLSALGTLAGSDGKAQISLHVQALSADELKAALAKSGQSGAGLVPQGSLYAFTLGIAKEDGTLSKLSAFPAPVALQFKLQGDTDARLAGIYYFSDGGAVEYIGGVLRDRTLSAEVSHFSNYGVFVYAKNYTDVPATYWAAGVIQEMTAKHVVQGISASQFGPKQNVTRAEFAAMLVRALGLKATGDAPFADVPADSWYAETTAAAYANGIVNGTTGGKFEPGKPIAREEMAAMIARIYAKQHGSEAPGGSASDLAVFKDANAISAWAKPEVQSAVHAGLMQGSVGLFAPRGSATRAEATQVLANLLLEQ
>NZ_CP048209.1|WP_162360377.1|2044302_2045262_+|primosomal-protein-DnaI
MESLGDLLKAMPGGRNIRQHADKLMADLLADPLVAKLRAKYPELDESTIRLNMNRVYQCTQEYRNCSNCQGLDQCPNDFEGHYTELSCETVGGLVQLTDRKVTCKKLIARQSEDRIRSRIRSFYMDERALSHGYSVDEIFSRDAERMKSVLQVISYIDRTKEEGLQPEGLYLSGSFGTGKTFLMCYMLHELAKTGLTGAIVYMPEFVEDMKTLMLEQGKVKETVDMLKETDLLIFDDIGAENLNPWVRDHVLGAILNYRMNRKPTFYTSNYSLDDIEQHFSFTNKDGDDEHRGQRLMDRIRHYVQPVHVTGHNKRGRSK
>NZ_CP048209.1|WP_162356101.1|2042736_2044263_+|helicase-DnaB
MRIGNMHQFTEHHRYYTFRDFSLSAVDRKMIGLIYQSMIGAFAVGLYHLLYQQVADDRVGYSELEPQRKLLLGLGLEMHERGRQELVNQASRLEAVGLLQATRLGVPDNDDVVYEYEVVKPLSPDEFFNSPHLTLLLRDKVGKHSVIALRESFYSQESDELAGAELTREDITVPFYELFRLNTQGFDPELEQALTEVAPSRQAAPKQQPAETAGMQYGEIIMRFPRNSRNRQHVERLRGNDEAMAQLNYVAYKYSLSVVDVCRLLDEDHAFSPQGELQIDELQLRGNQMFRQDRKRQDERERLYGRMESLRADNAKEGAADEMPDEVGVLAEFYMDVPAQLAGRCDIHQYNMLMRNEPHTRFIARFFKGAVPDDFIRQFDKFDLNYRMQGAVINVLIHYVFGLLDADRLNRGIIDSIANNMLVQGVETFEQAVGYVRKQLQVDQDKERRRESGNAAPAGARRNGGSAAAAKGRRKPLIPMVPETTNGAALTDEEMEEIRRLTRKLDGK
>NZ_CP048209.1|WP_162356100.1|2041698_2042613_+|alpha/beta-hydrolase
MPFFHIGDVGLYVQEPAAGGQGREGTVICVHPPCLTSRLFGSIEDQLGATHRLIRWDIRGHGFSDSGNSRMTLGMIAEDMRLLLDKLDVKRAYVCAYGAGSFPALAALLLHPQRFVGGMLLSGSAAYTDIRSRSKLQAAYISSMLAPKEPIAFKAAWSEARTRTEFEELRTEAKLGDPARWRDYAAACLEDGLERRVRHIKQPVLLLYGAKDSLGGIYASRLHRLLPNSELFGINGAKGQLATHEPVTTSFVMSRWMAKQEHPELADTHDEREALLRELSDHGVKEGAEGSVTHAQTLRNSYVH
>NZ_CP048209.1|WP_162356099.1|2041277_2041583_+|hypothetical-protein
MNTDVNILQLVIATVLFFVMMFGIGFILNMLLKTTFFPIYLFIIVLVPIFIWQTWDNTKSFGGNFTSFTFVDILPGIGALIGAYVSGTTIRLLRRGGYKMF
>NZ_CP048209.1|WP_162356106.1|2055862_2056927_+|ABC-transporter-ATP-binding-protein
MHIEIRNVNKSFGSHQAVHDVSFAIERGKLIGLLGPSGGGKSTLLRILAGLETPDSGDIFINGQRVNDVQPQLRGIGFVFQNYALFKHMTVFDNIAFGLTIRKASKAEIRARVGELLDLTGLRGFEQRYPHQLSGGQRQRVAFARALAPRPELLLLDEPFAAIDAKVRKELRTWLKGLIAELGITSIFVTHDQDEAVEVADEMLIVQQGRLEQQGSPLHIYTDPRTAFVAGFIGQSSIVEQPGSLPGFERAALADGARAIIRPEFVEVGRKEELAFPSAAVQGKVRHVFFRGAHLELDVEVGDNRLSAHRSLDQTPLQPGEDVAVLIHRMYVISEETATMVENPLKIDPLPVHI
>NZ_CP048209.1|WP_162356107.1|2057012_2057225_+|YezD-family-protein
MAKPIVLDQEWLDRIATQVNGLEYGSVLITVHDGRVVQIDRTERKRFETGSAKQQPPAQLAGDKLKAVGK
>NZ_CP048209.1|WP_162360380.1|2057349_2059587_-|MMPL-family-transporter
MTALERITAAVGGRRGRWLTLALWLISVATLSTLLPGANERKDDTLSNLGADQPSMQAARLIQQQFSTDDGVPALLTWFRADGLTDADLQGIQALSKQLGANPVPHQQSAVPLDRMPLDAMKKQVSADGTTFVQPVLFEKKADSDGLKEGLNELEQRVDRIFGDQHPFETALTDSTALAARVTGPVGIAVDASGLFGNADVSLLIATVALVLVFLLLIYRSPVLALIPLVAVGFAYGAITPLLGWMADMGWISFDSQALSIMTVLLFGAGTDYCLFLIARFRKELNEEAGIFGALKLAFGGSAGAIAMSGLTVVFSLLVLLFGEYGTVRRFAVPFSLAILIMMIASLTLVPALLAIIGRASFYPFVPRTREMEISRATAKGKPLPAPRVRATASDRLGDFVLKKPKRITILATLILVIGAIFATQIKYTFDTLSSFPADMGSREGFALIGDHFNAGELAPVQVLVQSEGRSIGVKEALTALPYVKNVADARQGSQDSGILSYEVELAVNPYSNEAIDRLPGLRAAAEQALEESEIDGAAGKVWIGGQTAEQYDTRQTTSDDAKLIIPFILILIALLLLVYLRSIVAMLFLIATVVLSYCSALGLGWIVLHYFFGADAIQGLIPLYSFVFIVALGEDYNIFMVSSIWTKSRVMPLRQAIKEGVSQTSSVITSAGLILAGTFAVLATLPIQVLVQFGTITALGVLLDTFIVRPFLVPALIVLCGRYSFWPAQATDVGQERAQSANRE
>NZ_CP048209.1|WP_162356108.1|2059713_2060382_-|TetR/AcrR-family-transcriptional-regulator
MAAHKTNQSHETRAMIVKTAKELFMAYGYRAVSTRQIADACALTQPALYHHFSDKQSLYVDVMRYVCEGTRKTLERIIHRGPAIHECLLHVTTYMIVNHPEDLGQMFHDIRHELSPESQAAVYALWRTAYLAPIVSIFENGQRTGELRSSGQSGIDAERSALLLMGLINQTLAAQAVGTPGSTAAKSAGEGAGRNINACKQQALMLVNVLLYGLSAAEPPSV
>NZ_CP048209.1|WP_162360381.1|2060453_2061623_-|ribosome-small-subunit-dependent-GTPase-A
MNNPQETADRLGSASGGNGFAPDTAGSDAACTLGAFGWNEQWQTAFEAAPKPAAGLVPARVTAQFTNQYRVRCEAGELAAEVSGKFQFQASARGDYPAVGDWVLAQPLPGERRAVIHGVLPRRTAMIRRAAGSVPEEQVIGANIDTLFIVNALNGDYNVSKIERYLVAAWESGASPVVLLTKADLCDDAGRRVAEVESAAPGVPVHAVSALEDQGRGELAPYLRPGRTIAVTGSSGAGKSTLLNWLAGEERQHVQGVREDDARGRHTTTHRELFPLPGGFIMMDTPGMRELQLWDAGDGRQEAFSDIEALAASCRFRDCKHGAELGCAVKQALRNGSLDERRYASYKKTGRELAHQAKKEQAVTKRAKKSADKRLAARENQARPAIDYD
>NZ_CP048209.1|WP_162356109.1|2062375_2063191_+|class-I-SAM-dependent-methyltransferase
MSEKQRNETENELLNEDQIIARWCADLYDQHLFETDEDVRFLLSMLETPSLRILEACCGSGRILVPLAKAGHDAVGFDRDPFMLERLAGKAKDLKNIAWRQADAIAEGWGEGYDVVVLAGNILFNIVADVAYEQAQALFIEQAANAVKPGGHVYIDYGCFARPEAVFGQPGARLIWEGTDRAGNTGRMVLLDSAYDAAEGIDRSTRRFDIALSNGEALMKDVPSIKHYASLEQLHGWLERAGLTVIREFGDYRRNPIGEHTHRAIIWARKR
>NZ_CP048209.1|WP_162356110.1|2063388_2063535_-|YqzM-family-protein
MENVRDPREHVNEEPRDDLFDVAMGFGGFFGLLFVIFAVAVIIKFAIS
>NZ_CP048209.1|WP_162356111.1|2063730_2065851_+|excinuclease-ABC-subunit-UvrC
MGDNHASETSADRRLAEERIRGKLALLPDQPGCYLMKDGSGTIIYVGKAKVLKNRVRSYFNGSHNGKTLRLVSQIRDFEYIVTSSNMEALILECNLIKQYHPRYNVLLKDDKTFPYIKITSEKHPKLEVTRRIVKDKGKYFGPYPNAFAAQQTKKLLDRLYPLRKCGTLPDKVCLYYHLGQCVAPCEFDIAPGTYETMVQEITRFLGGGHDEVRKALQAKMEAAAEEMEFERAKEFRDQIIAIDAVMEKQKITMNDAMDRDVFGFAVDKGWMCVQIMYMRQGKLIERRATMFPYYGNAYDDFMTFVTQYYSENPALPKEIFLPALPGADTAEELAPSMEAADGQGAGSVTLTDAAEARQPASLAAEAQSDYRLGHEAVAAETEGETETETEGGETEASVAIRAVEADEDAADAEEAPAAGTPEAELRSSLQKWLKVKVFIPQRGRKKDVVAMAVHNASMALEEKFKLIERDEDRTFKAAEGLAEAIGLPQVSRIEAFDNSNIQGTNPVSAMVVFTDGKPDKKEYRKYKVKTVQGPDDYETMREVVRRRYERVLNEGLPLPDLIIVDGGRGQISAALDVLENELGLAVPVCGLVKDAKHKTAQLMTGDPPEVVPLARDSQAFYLLQRIQDEVHRFAITFHREQRAKSMVASRLDAIPGIGEKRRKALLKHFGSIKKIKEAAIEDFRPLSIGEKLAAQIIEALREEPS
>NZ_CP048209.1|WP_162356112.1|2065946_2067554_-|CPBP-family-intramembrane-metalloprotease
MDALQLKPNWKWFGWLAGIGIILYLLIQIVPSTAESFFSNNSEPVIAKSKAEQLAASFVQRQYGNRPLSVHAVHQSDSMLYGYLEKNKLTRSYEDKYDATLPTDTFQVNAEMPDNSMAFVYVHMQSGKVVGWNRLDDKDVKPARGSGLQESALAFASSQGYQKSGLKVYRTQPETGDIWLEQTTSDVGEAKLMLGIRSEQLDNGGYRIVKFKPAFVVPESYADYVTKQKKLANYLSTIGSLFLSFVLFILAIIYASLYRKHSSFVRGIVITLLFLVMYIVNDINMKDGLLAGYGETADGSILAAAAVLVTCLVTIVMALAVYFSLVAGDGLWRSMGRSLWPRYGQAGYGEHVWRSMWLGYLSAFALLGLQTVIFIVLMHAYGSWATTDVTQSTYNLAVPWAFPLLAWCAAISEEAVFRLFGIGLLKRWFKNSFVASLIPTIIWALGHVTYPIFPSTTRLLELTVIGLVFSFLFLRFGFITVLFAHAIFDSTMMAISLMFMGGAGDVLIGIFYIVLPIPIAWLFRAWDKRRRLSPA
>NZ_CP048209.1|WP_162356113.1|2067972_2068866_-|LysR-family-transcriptional-regulator
MLEELNMFTVVVEQSSMNKASAALNLSQPALSRKIAKLEQELGTLLFRRIGKRLELTRIGQLTYDYAVEARQQHLRFLKLLAEYKDTGRSTFTIGASLTTLQTSLPDLIQALTAISPELDIKAITGKTHEIVTLVRERKADLGIVASSIEDPHLNCVPLFDDHLVLVLPRNHFIMEKTAPVINDLNGMPMILFSKGTWYRIMTDELFERYRLLPDVRMEIDSFEAILRLLQTCRAATLLPKSYLRPQMLTDNDLLVVPIRELEQSKRTTSLIYDHSDSLSPAVRQWIDEIASQYRPV

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Crispr_ID: NZ_CP048209_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_10

2074686-2074781

Orphan

Consensus_repeat	Method
CCGCCCACGAGCCGATGCCCGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_10

>merge|NZ_CP048209|10|2074686-2074781|CRISPRCasFinder
CCGCCCACGAGCCGATGCCCGGCTTTAGGAACGGCTGCGGCGCCATTCCGACGCCTGCCGCCCCTCAAGGCCGCCGCCCACGAGCCGATGCCCGGC

>NZ_CP048209|10|9|2074686-2074781|CRISPRCasFinder
CCGCCCACGAGCCGATGCCCGGC	TTTAGGAACGGCTGCGGCGCCATTCCGACGCCTGCCGCCCCTCAAGGCCG
CCGCCCACGAGCCGATGCCCGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162356118.1\|2077806_2078616_-\|histidinol-phosphatase	unknown	unknown	gnl\|CDD\|213994
NZ_CP048209.1\|WP_162360382.1\|2075104_2075398_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
NZ_CP048209.1\|WP_162356123.1\|2083551_2084469_+\|homoserine-O-succinyltransferase	unknown	unknown	gnl\|CDD\|335664
NZ_CP048209.1\|WP_162356121.1\|2081125_2081779_+\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|183256
NZ_CP048209.1\|WP_162356112.1\|2065946_2067554_-\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806
NZ_CP048209.1\|WP_162356113.1\|2067972_2068866_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP048209.1\|WP_162356109.1\|2062375_2063191_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP048209.1\|WP_162356117.1\|2075668_2076535_+\|DUF695-domain-containing-protein	unknown	unknown	gnl\|CDD\|377727
NZ_CP048209.1\|WP_162356120.1\|2079793_2081068_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|341035
NZ_CP048209.1\|WP_162355109.1\|2074124_2074445_-\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP048209.1\|WP_162356124.1\|2084527_2085688_+\|methionine-biosynthesis-PLP-dependent-protein	unknown	unknown	gnl\|CDD\|181320
NZ_CP048209.1\|WP_162356114.1\|2069178_2069850_+\|succinate-dehydrogenase	unknown	unknown	gnl\|CDD\|239577
NZ_CP048209.1\|WP_162356110.1\|2063388_2063535_-\|YqzM-family-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162356122.1\|2081864_2082800_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213356
NZ_CP048209.1\|WP_162356111.1\|2063730_2065851_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP048209.1\|WP_162360268.1\|2073252_2074155_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP048209.1\|WP_162356119.1\|2078699_2079602_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP048209.1\|WP_162356116.1\|2071637_2072402_+\|succinate-dehydrogenase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|181515
NZ_CP048209.1\|WP_162356115.1\|2069874_2071623_+\|succinate-dehydrogenase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|236319
NZ_CP048209.1\|WP_162356125.1\|2085692_2086871_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|236146

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162356118.1\|2077806_2078616_-\|histidinol-phosphatase	gnl\|CDD\|213994	cd12110, PHP_HisPPase_Hisj_like, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase of Hisj like. Bacillus subtilis YtvP HisJ has strong histidinol phosphate phosphatase (HisPPase) activity. The PHP (also called histidinol phosphatase-2/HIS2) domain is associated with several types of DNA polymerases, such as PolIIIA and family X DNA polymerases, stand alone histidinol phosphate phosphatases (HisPPases), and a number of uncharacterized protein families. HisPPase catalyzes the eighth step of histidine biosynthesis, in which L-histidinol phosphate undergoes dephosphorylation to produce histidinol. The PHP domain has four conserved sequence motifs and contains an invariant histidine that is involved in metal ion coordination. The PHP domain of HisPPase is structurally homologous to other members of the PHP family that have a distorted (beta/alpha)7 barrel fold with a trinuclear metal site on the C-terminal side of the barrel.	5.7282e-84
NZ_CP048209.1\|WP_162360382.1\|2075104_2075398_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	1.18212e-33
NZ_CP048209.1\|WP_162356123.1\|2083551_2084469_+\|homoserine-O-succinyltransferase	gnl\|CDD\|335664	pfam04204, HTS, Homoserine O-succinyltransferase.	0
NZ_CP048209.1\|WP_162356121.1\|2081125_2081779_+\|metal-dependent-hydrolase	gnl\|CDD\|183256	PRK11648, PRK11648, metal-dependent hydrolase.	4.20682e-07
NZ_CP048209.1\|WP_162356112.1\|2065946_2067554_-\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	3.62738e-09
NZ_CP048209.1\|WP_162356113.1\|2067972_2068866_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.38033e-42
NZ_CP048209.1\|WP_162356109.1\|2062375_2063191_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.37533e-12
NZ_CP048209.1\|WP_162355109.1\|2074124_2074445_-\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	4.69642e-06
NZ_CP048209.1\|WP_162356120.1\|2079793_2081068_+\|MFS-transporter	gnl\|CDD\|341035	cd17482, MFS_YxiO_like, Bacillus subtilis YxiO, Listeria monocytogenes BtlA, and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis MFS-type transporter YxiO, and similar proteins including Listeria monocytogenes BtlA. The function of B. subtilis YxiO is still unknown, and L. monocytogenes BtlA is a putative secondary transporter involved in bile tolerance and general stress resistance. This family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.79559e-138
NZ_CP048209.1\|WP_162356117.1\|2075668_2076535_+\|DUF695-domain-containing-protein	gnl\|CDD\|377727	pfam06877, RraB, Regulator of ribonuclease activity B. This family of proteins regulate mRNA abundance by binding to RNaseE and inhibiting its endonucleolytic activity. A subset of these proteins are predicted to function as immunity proteins.	6.70608e-14
NZ_CP048209.1\|WP_162356124.1\|2084527_2085688_+\|methionine-biosynthesis-PLP-dependent-protein	gnl\|CDD\|181320	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein.	0
NZ_CP048209.1\|WP_162356114.1\|2069178_2069850_+\|succinate-dehydrogenase	gnl\|CDD\|239577	cd03497, SQR_TypeB_1_TM, Succinate:quinone oxidoreductase (SQR) Type B subfamily 1, transmembrane subunit; composed of proteins similar to Bacillus subtilis SQR. SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Bacillus subtilis SQR reduces low potential quinones such as menaquinone. SQR is also called succinate dehydrogenase (Sdh) or Complex II and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are classified as Type B as they contain one transmembrane subunit and two heme groups. The heme and quinone binding sites reside on the transmembrane subunit. The transmembrane subunit of Bacillus subtilis SQR is also called Sdh cytochrome b558 subunit. The structural arrangement allows efficient electron transfer between the catalytic subunit, through iron-sulfur centers, and the transmembrane subunit containing the electron acceptor (quinone). The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	2.47001e-74
NZ_CP048209.1\|WP_162356122.1\|2081864_2082800_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.76388e-104
NZ_CP048209.1\|WP_162356111.1\|2063730_2065851_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	2.19551e-161
NZ_CP048209.1\|WP_162360268.1\|2073252_2074155_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	4.8068e-77
NZ_CP048209.1\|WP_162356119.1\|2078699_2079602_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.79517e-56
NZ_CP048209.1\|WP_162356116.1\|2071637_2072402_+\|succinate-dehydrogenase-iron-sulfur-subunit	gnl\|CDD\|181515	PRK08640, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed.	0
NZ_CP048209.1\|WP_162356115.1\|2069874_2071623_+\|succinate-dehydrogenase-flavoprotein-subunit	gnl\|CDD\|236319	PRK08641, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed.	0
NZ_CP048209.1\|WP_162356125.1\|2085692_2086871_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|236146	PRK08064, PRK08064, cystathionine beta-lyase MetC.	0

>NZ_CP048209.1|WP_162355109.1|2074124_2074445_-|transposase
MGEQRQRYNEEFKRQTVRFVQEQTKSLSDLSEELNIPKSTLSQWMTQYRQFEKEPVVNHPEKIKLLEQSLKDAELENRRKERELEDMKEELAILKKALHIFSKAKN
>NZ_CP048209.1|WP_162360268.1|2073252_2074155_-|IS3-family-transposase
MAHFQQSKELRFQLIDEHRSEFRVEKMCVVLGVSKSGYYKWLEATPSERQLRKKQLTERITWHFYDSQKRYGSPRIHNELVKEGWVVSERTVGKIMKENNLRSCMSGKFRVTTTDSKHQLPIAPNVLQQDFTATKPNQKWVADITYIPCRQGKLYLASILDLYTKQIVGWKLSNTMTTDLVLDALKQAYAAKKPAKGLIHHSDRGSQYASKEYRKQLKKYKMEASMSRRGNCYDNACIEAYHSILKRELIYCNPKFKTQAEAYQEIYRYLEFFYNRKRSNSTLGYISPYLFEQLYYEKNA
>NZ_CP048209.1|WP_162356116.1|2071637_2072402_+|succinate-dehydrogenase-iron-sulfur-subunit
MAETAVAQKTVKLIITRQDGPDKASYTEEFEVPYRANMNVISALMEIQRNPKKSDGQKTAPVCWESNCLEEVCGACSMVINGKPRQACSSLIDKLEQPVRLAPMKTFPVVRDLVINRERMFNALKRVKAWIPIDGTYDLGPGPRMAETKRQWAYELSKCMTCGVCLEACPNVNDRNSFIGPAAISQVRLFNAHPTGEMHKEERLEALMDDGGIEGCGNSQNCVRSCPKGIPLTTSIAAINKDTTKHLFKTWLGM
>NZ_CP048209.1|WP_162356115.1|2069874_2071623_+|succinate-dehydrogenase-flavoprotein-subunit
MAKNRMIVVGGGLAGLMATIKAAEAGVHVDLFSVVPVKRSHSVCAQGGINGAVNTKGEGDSTWEHFDDTVYGGDFLANQPPVKAMCDAAPGIIHLMDRMGVMFSRTPEGLLDFRRFGGTQYHRTAFAGATTGQQLLYALDEQVRRWETAGLVTKREHWEFTGAILDDDGVCRGITAQDLRSMEVHTFAADAVILATGGPGIIFGKTTNSVINTGTAASAVYQQGVYYGNGEFIQIHPTAIPGDDKNRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFAVCVDQKLGINGENKVYLDLSHKDPKELDVKLGGIIEIYEKFTGDDPRKIPMQIFPAVHYSMGGLWVDYNQMTNIPGLFACGECDYQYHGANRLGANSLLSAIYGGMITGPKAVEYLKGLKKSAEDLPSSVFDREKKRQTDKYENILKMDGTENAYVLHKELGELMTNNMTVVRFNKRLEETIASIKDLKQRYQKININDTASWNNAGVAFTRQLWNMLELSEAMTLGALMRNESRGAHYKPEFPDRNDEEFLKTTKAKWTAEGPQISYEDVDVSLIKPRKRDYSKDKS
>NZ_CP048209.1|WP_162356114.1|2069178_2069850_+|succinate-dehydrogenase
MKGNSYFSRKLHSLLGVIPLGLFIIEHMITNFSAYEKGPQGFADSVKWLNDLPLVFFLELIGIWLPLLFHGVYGLYVAYQSNLNSGRFQYGRNWAFTLQRITGVITFIFIFWHLYQTRLQVALGNVTHEQLGNEMHSITSNGFYFVLYIIGILAATFHFSNGMWAFLVSWGITIGPRAQRVSSYIWMGVFVIVAVLFLLSLVSFRGDEFKEAASAALQATNLV
>NZ_CP048209.1|WP_162356113.1|2067972_2068866_-|LysR-family-transcriptional-regulator
MLEELNMFTVVVEQSSMNKASAALNLSQPALSRKIAKLEQELGTLLFRRIGKRLELTRIGQLTYDYAVEARQQHLRFLKLLAEYKDTGRSTFTIGASLTTLQTSLPDLIQALTAISPELDIKAITGKTHEIVTLVRERKADLGIVASSIEDPHLNCVPLFDDHLVLVLPRNHFIMEKTAPVINDLNGMPMILFSKGTWYRIMTDELFERYRLLPDVRMEIDSFEAILRLLQTCRAATLLPKSYLRPQMLTDNDLLVVPIRELEQSKRTTSLIYDHSDSLSPAVRQWIDEIASQYRPV
>NZ_CP048209.1|WP_162356112.1|2065946_2067554_-|CPBP-family-intramembrane-metalloprotease
MDALQLKPNWKWFGWLAGIGIILYLLIQIVPSTAESFFSNNSEPVIAKSKAEQLAASFVQRQYGNRPLSVHAVHQSDSMLYGYLEKNKLTRSYEDKYDATLPTDTFQVNAEMPDNSMAFVYVHMQSGKVVGWNRLDDKDVKPARGSGLQESALAFASSQGYQKSGLKVYRTQPETGDIWLEQTTSDVGEAKLMLGIRSEQLDNGGYRIVKFKPAFVVPESYADYVTKQKKLANYLSTIGSLFLSFVLFILAIIYASLYRKHSSFVRGIVITLLFLVMYIVNDINMKDGLLAGYGETADGSILAAAAVLVTCLVTIVMALAVYFSLVAGDGLWRSMGRSLWPRYGQAGYGEHVWRSMWLGYLSAFALLGLQTVIFIVLMHAYGSWATTDVTQSTYNLAVPWAFPLLAWCAAISEEAVFRLFGIGLLKRWFKNSFVASLIPTIIWALGHVTYPIFPSTTRLLELTVIGLVFSFLFLRFGFITVLFAHAIFDSTMMAISLMFMGGAGDVLIGIFYIVLPIPIAWLFRAWDKRRRLSPA
>NZ_CP048209.1|WP_162356111.1|2063730_2065851_+|excinuclease-ABC-subunit-UvrC
MGDNHASETSADRRLAEERIRGKLALLPDQPGCYLMKDGSGTIIYVGKAKVLKNRVRSYFNGSHNGKTLRLVSQIRDFEYIVTSSNMEALILECNLIKQYHPRYNVLLKDDKTFPYIKITSEKHPKLEVTRRIVKDKGKYFGPYPNAFAAQQTKKLLDRLYPLRKCGTLPDKVCLYYHLGQCVAPCEFDIAPGTYETMVQEITRFLGGGHDEVRKALQAKMEAAAEEMEFERAKEFRDQIIAIDAVMEKQKITMNDAMDRDVFGFAVDKGWMCVQIMYMRQGKLIERRATMFPYYGNAYDDFMTFVTQYYSENPALPKEIFLPALPGADTAEELAPSMEAADGQGAGSVTLTDAAEARQPASLAAEAQSDYRLGHEAVAAETEGETETETEGGETEASVAIRAVEADEDAADAEEAPAAGTPEAELRSSLQKWLKVKVFIPQRGRKKDVVAMAVHNASMALEEKFKLIERDEDRTFKAAEGLAEAIGLPQVSRIEAFDNSNIQGTNPVSAMVVFTDGKPDKKEYRKYKVKTVQGPDDYETMREVVRRRYERVLNEGLPLPDLIIVDGGRGQISAALDVLENELGLAVPVCGLVKDAKHKTAQLMTGDPPEVVPLARDSQAFYLLQRIQDEVHRFAITFHREQRAKSMVASRLDAIPGIGEKRRKALLKHFGSIKKIKEAAIEDFRPLSIGEKLAAQIIEALREEPS
>NZ_CP048209.1|WP_162356110.1|2063388_2063535_-|YqzM-family-protein
MENVRDPREHVNEEPRDDLFDVAMGFGGFFGLLFVIFAVAVIIKFAIS
>NZ_CP048209.1|WP_162356109.1|2062375_2063191_+|class-I-SAM-dependent-methyltransferase
MSEKQRNETENELLNEDQIIARWCADLYDQHLFETDEDVRFLLSMLETPSLRILEACCGSGRILVPLAKAGHDAVGFDRDPFMLERLAGKAKDLKNIAWRQADAIAEGWGEGYDVVVLAGNILFNIVADVAYEQAQALFIEQAANAVKPGGHVYIDYGCFARPEAVFGQPGARLIWEGTDRAGNTGRMVLLDSAYDAAEGIDRSTRRFDIALSNGEALMKDVPSIKHYASLEQLHGWLERAGLTVIREFGDYRRNPIGEHTHRAIIWARKR
>NZ_CP048209.1|WP_162360382.1|2075104_2075398_-|winged-helix-turn-helix-transcriptional-regulator
MCPKYECATELLGKKWIALIIRVLLGGPKRFKEIKEQIPEMSDKMLTDRMKELEHCEIIKRNVYPEMPVRIEYELTKKGRGLEPVIQSIQDWGEHWC
>NZ_CP048209.1|WP_162356117.1|2075668_2076535_+|DUF695-domain-containing-protein
MTDNWGFYERRAGGEQMRVLVNIGHRATAPLEGYTELLSVTVNLYPVRENTRNNRQFIIQLEELEAKLEHWLNGTADAVYVGRINAATRLEFYYYAKEGLTGGNAIRAWLDEHWPHRAQSYSKSDPEWEFYRFLMPSALEELFVHNAQMIYALIHKGDKIAEPRIVYHWLLFREAEDRVEMEELLQSEGYAIEKGKESKPEDDFPYPLVISKYEDVRLDTINARVRELYQLLDGRAGRYDGWGSTMRLSAAMRFRWYMKRRKEAVQSACRRLFMRGQSQPNQNQPGNR
>NZ_CP048209.1|WP_162356118.1|2077806_2078616_-|histidinol-phosphatase
MKFDLHTHHFRCGHADDRIEDYIQAGIKAGLAVIGISDHSPYFFSDQDRLNPGIAMAKSEFANYVDEVLRLKGKYEGRIDVLLGVESDFFPEHIELYRSIYARYPFDYIIGSVHQSRGVSIFNRNRWKGLSEARKQEEKRHYYKLIGQSAQTGMFQVLGHIDAMKGYYPAFSDIQADDAIDEALKLIADSGVSIEINTSGSTKDVGGWYPSDAILERACHYGVAVTFGSDAHKPGRVGDEWELVAKRLKEIGFTQWQYYKNKQPVVVPL
>NZ_CP048209.1|WP_162356119.1|2078699_2079602_-|LysR-family-transcriptional-regulator
MNINQLETLLTISRTMSFRKAGELLNLTQPAVSAQIKSLEDEFKTVLIDRNQPVTLTDRGKVFLDHAERMLSIVEELKQKLSDLNQTPQGHIVLGTTSSIAIQILPRVLSYFQNQFPLIKTTIHSMPSSGVMASVENGNVDIGITYLNERNPNVETSILYYDTYELVVAPEHPMSQLKHTTVESLKDIPMIMLSPDTLGRRFLDQIFRRFNLQPNIVMELSSSEEVKRMVEINLGAAVVSKLSIANEVRLGTLKRIKVNELDMSHPVGLVYKSGRYINSAMQQFLSDLKGMPEDHFISSE
>NZ_CP048209.1|WP_162356120.1|2079793_2081068_+|MFS-transporter
MNPKAVRSWIMYDWANSAFVTTIMAAVMPVFYKEVAGKGLIGNAAENYWGFTQTIAMLFVAVLCPILGAVADYAGSKVRFLSAFMYIGAAASVGMAFIGEGDWLFASVLVVIGTIGFAASNTFYDALLPSVSTPETMNAVSNRGYAMGYLGGGLLLLVNLVMIMFYDKLGFPTKTLATQTVFAMVGVWWLLFSLPVMRNVKETAREESAGFGRAVKKGLSRVKGTIATLKRYPELLKYMASFWFFNDGINTVIVMATIYGSGIGIETNDLIAALLITQFVGYPSTLLFIKFASRIGVKKSIYSSLTVYILIVILGFFMTSAVHFYALAALVGLVQGGSQATARSLYASLVPPSRTAEFFGFLSLSSKFASIAGPFVFSVVGTITGSSRYGILALLAFFIIGIAILVYVDVDKGKREALAGEAAA
>NZ_CP048209.1|WP_162356121.1|2081125_2081779_+|metal-dependent-hydrolase
MKGTTHLTIGLAIGVAAAASHPFTARNAALYVAVAAFSSLSADLDGTSMLSGKLNRAAKAVHALLLWGGAALTAAAGIAYAAKGFLRVEWAIAAVSVLLLGLVLGNGKIRNALVSLIGLGLLYGGFAQGLSWLMGLGVFVAWVPWLNHRGLTHTVWAAAAWWAIGNGLEAQIGVADIAQTALWGYLSHLIADTLTPSGVKWLYPLTKKTFKLPLGKL
>NZ_CP048209.1|WP_162356122.1|2081864_2082800_-|magnesium/cobalt-transporter-CorA
MKIRHVTQGVFKTIDDVATATIPPAEGFYWIDADVDDLTVLQPLFSLHELAVEDCLSEEEQRPKIEIHEGHYFLVINSIRFDDEEIFLRALNIFLGRHYIITVTKQKINELRSLKPILLEEQVSRPDHFLYHLVDIVVDNYFLVGDRIEVRIESLEEDILVHTKKSHLNEIIGLRSEILWLKKVLGPQKELIATLNKKDLKLIDDQLQKYFSDIYENAVKIAETFDTYRDLMGNLREAYQSSLANRANEIMRVFTALTTIFMPLTFITGIYGMNFDYIPGLHMHGGSYVLLTFMLLLGFGMFFIFRKKEWL
>NZ_CP048209.1|WP_162356123.1|2083551_2084469_+|homoserine-O-succinyltransferase
MPIKVPDQLPAKDILIEENIFVMEESFAYHQDIRPLRIVILNLMPTKEVTETQLLRLIGNTPLQVEAVLIHPKTHTSKNTSSQHLESFYKTFDDIKHEYYDGMIITGAPVETLPFEEVNYWEELKDIMDWSTRKVTSTFHICWGAQAGLYHHYGIPKYDLAEKMFGVFPHQVVKRNVPLMRGFDEQFFVPQSRHTEVRTADIEAVNDLDILSTSPDAGVYIAASRNGRQIFVTGHSEYDPCSLKAEYDRDVAKGMDIALPRNYYPNDDPSKLPLSTWRAHANLLFSNWLNYYVYQQTPYDLGAGI
>NZ_CP048209.1|WP_162356124.1|2084527_2085688_+|methionine-biosynthesis-PLP-dependent-protein
MKIESRLAQIGSIKEPVTGAVSFPVYQATAFRHPRLGESTGFDYARTKSPTRSVLEEAAAQLESGDAGFACSSGMAALTTIFSLFGQGDHLLVSLDLYGGTYRLLERIMSRFGVTATYVDTNDIDELNMLVTPSTKAILIETPTNPLMMITDLERVCAWAKSKNLLSIVDNTLLTPFFQRPIELGADIVVHSASKYLGGHNDVLAGLIVTKGKELSEQMAFLHNSLGAVLGPQDSWLLMRGMKTLALRMERHQANATAIANWLLAHEAVDEVYYPALPHHPGHDAQSRQSSGNTGIFSFRLKNAAYVEPILRHIRLIAFAESLGGVESLMTYPAVQTHADIPVEIRQKIGVDDRLLRFSVGIEHQDDLIADLAQAFDAAKREIEGA
>NZ_CP048209.1|WP_162356125.1|2085692_2086871_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MSEQQSKNNNNKPETKFATKLIHFGSEIDEHTGASSVPIYQASTFHHHDIFNPPVHDYSRSGNPTRQALEDYIALLEGGARGFAFASGMAAISTAFLLFSTGDHVIVTEDVYGGTYRLLTTVLNRLGIESTFVDMTDFDAVKAALRSNTKAVFMETPSNPTLKITDIGEIAAWAKSHELITLLDNTFMTPYHQRPIELGVDIVLHSATKFLGGHSDVLAGLAVVANDSLGRRLKQLQNGLGTVLAPQESWLLMRGMKTLQARMEQSERSTRKLAEWLSGHPAVTRVYYPGLADHPRREVHEKQSKGYGAVVSFDVGDGDRAKAVLSRVKLPLVAVSLGAVESILSYPAMMSHAAMPQEVRHERGITDGLLRYSVGLEDIDDLIADLDQALNG

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Crispr_ID: NZ_CP048209_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_11

3755523-3755621

Orphan

Consensus_repeat	Method
TTAACCGTTACGTCGGCGGAAGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_11

>merge|NZ_CP048209|11|3755523-3755621|CRISPRCasFinder
TTAACCGTTACGTCGGCGGAAGTCGAGCATGAACTCGGTTAGCCGTTAGTTGGCGGAAGCAGAGCATGACATCGGTTAACCGTTACGTCGGCGGAAGCA

>NZ_CP048209|11|10|3755523-3755621|CRISPRCasFinder
TTAACCGTTACGTCGGCGGAAGTC	GAGCATGAACTCGGTTAGCCGTTAGTTGGCGGAAGCAGAGCATGACATCGG
TTAACCGTTACGTCGGCGGAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162357841.1\|3750000_3750621_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240029
NZ_CP048209.1\|WP_162357839.1\|3747067_3748066_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176201
NZ_CP048209.1\|WP_162357845.1\|3755635_3756886_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_CP048209.1\|WP_162357843.1\|3751377_3751938_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|376665
NZ_CP048209.1\|WP_162357835.1\|3741317_3742769_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP048209.1\|WP_162357838.1\|3745484_3746855_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP048209.1\|WP_162357837.1\|3743853_3744999_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357842.1\|3750635_3751202_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226975
NZ_CP048209.1\|WP_162357850.1\|3762376_3763486_-\|alpha-hydroxy-acid-oxidizing-protein	unknown	unknown	gnl\|CDD\|239448
NZ_CP048209.1\|WP_162357846.1\|3757544_3758522_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381310
NZ_CP048209.1\|WP_162357848.1\|3760283_3760754_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP048209.1\|WP_162357836.1\|3742840_3743596_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227609
NZ_CP048209.1\|WP_162357849.1\|3761129_3762053_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|234698
NZ_CP048209.1\|WP_162357847.1\|3758715_3760287_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048209.1\|WP_162357844.1\|3751959_3755352_-\|methylmalonyl-CoA-mutase-family-protein	unknown	unknown	gnl\|CDD\|239650
NZ_CP048209.1\|WP_162357852.1\|3764267_3765278_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702
NZ_CP048209.1\|WP_162357853.1\|3767186_3769001_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048209.1\|WP_162357851.1\|3763658_3764249_+\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_CP048209.1\|WP_162357840.1\|3748277_3749831_+\|stage-V-sporulation-protein-B	unknown	unknown	gnl\|CDD\|274343
NZ_CP048209.1\|WP_162360517.1\|3765321_3767055_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162357841.1\|3750000_3750621_-\|NUDIX-hydrolase	gnl\|CDD\|240029	cd04672, Nudix_Hydrolase_14, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.48772e-62
NZ_CP048209.1\|WP_162357839.1\|3747067_3748066_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176201	cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	9.40353e-75
NZ_CP048209.1\|WP_162357845.1\|3755635_3756886_-\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	0
NZ_CP048209.1\|WP_162357843.1\|3751377_3751938_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|376665	pfam01923, Cob_adeno_trans, Cobalamin adenosyltransferase. Cobalamin adenosyltransferase This family contains the gene products of PduO and EutT which are both cobalamin adenosyltransferases. PduO is a protein with ATP:cob(I)alamin adenosyltransferase activity. The main role of this protein is the conversion of inactive cobalamins to AdoCbl for 1,2-propanediol degradation.The EutT enzyme appears to be an adenosyl transferase, converting CNB12 to AdoB12.	1.56843e-83
NZ_CP048209.1\|WP_162357835.1\|3741317_3742769_-\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	9.61515e-34
NZ_CP048209.1\|WP_162357838.1\|3745484_3746855_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.3726e-11
NZ_CP048209.1\|WP_162357842.1\|3750635_3751202_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|226975	COG4627, COG4627, Uncharacterized protein conserved in bacteria [Function unknown].	3.65373e-75
NZ_CP048209.1\|WP_162357850.1\|3762376_3763486_-\|alpha-hydroxy-acid-oxidizing-protein	gnl\|CDD\|239448	cd03332, LMO_FMN, L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.	4.74508e-176
NZ_CP048209.1\|WP_162357846.1\|3757544_3758522_-\|aldo/keto-reductase	gnl\|CDD\|381310	cd19084, AKR_AKR11B1-like, AKR11B1/AKR11B2 subfamily of aldo-keto reductase (AKR). Bacillus subtilis YhdN, also called general stress protein 69 (GSP69), is a founding member of aldo-keto reductase family 11 member B1 (AKR11B1). It acts as an aldo-keto reductase (AKR) that catalyzes the reversible reduction of ketones to the respective alcohols using NAD(P)H as a hydride donor. Escherichia coli YdjG is a founding member of aldo-keto reductase family 11 member B2 (AKR11B2). It catalyzes the NADH-dependent reduction of methylglyoxal (2-oxopropanal) in vitro. It may play some role in intestinal colonization.	5.61283e-85
NZ_CP048209.1\|WP_162357848.1\|3760283_3760754_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.19432e-14
NZ_CP048209.1\|WP_162357836.1\|3742840_3743596_-\|hypothetical-protein	gnl\|CDD\|227609	COG5285, COG5285, Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin [Secondary metabolites biosynthesis, transport, and catabolism].	0.000516404
NZ_CP048209.1\|WP_162357849.1\|3761129_3762053_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	8.71125e-53
NZ_CP048209.1\|WP_162357847.1\|3758715_3760287_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.53416e-77
NZ_CP048209.1\|WP_162357844.1\|3751959_3755352_-\|methylmalonyl-CoA-mutase-family-protein	gnl\|CDD\|239650	cd03678, MM_CoA_mutase_1, Coenzyme B12-dependent-methylmalonyl coenzyme A (CoA) mutase (MCM) family, unknown subfamily 1; composed of uncharacterized bacterial proteins containing a C-terminal MCM domain. MCM catalyzes the isomerization of methylmalonyl-CoA to succinyl-CoA. The reaction proceeds via radical intermediates beginning with a substrate-induced homolytic cleavage of the Co-C bond of coenzyme B12 to produce cob(II)alamin and the deoxyadenosyl radical. MCM plays an important role in the conversion of propionyl-CoA to succinyl-CoA during the degradation of propionate for the Krebs cycle. In some bacteria, MCM is involved in the reverse metabolic reaction, the rearrangement of succinyl-CoA to methylmalonyl-CoA. Members of this subfamily also contain an N-terminal coenzyme B12 binding domain followed by a domain similar to the E. coli ArgK membrane ATPase.	0
NZ_CP048209.1\|WP_162357852.1\|3764267_3765278_-\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.59165e-12
NZ_CP048209.1\|WP_162357853.1\|3767186_3769001_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.01976e-85
NZ_CP048209.1\|WP_162357851.1\|3763658_3764249_+\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	4.17296e-34
NZ_CP048209.1\|WP_162357840.1\|3748277_3749831_+\|stage-V-sporulation-protein-B	gnl\|CDD\|274343	TIGR02900, Stage_V_sporulation_protein_B, stage V sporulation protein B. SpoVB is the stage V sporulation protein B of the bacterial endopore formation program in Bacillus subtilis and various other Firmcutes. It is nearly universal among endospore-formers. Paralogs with rather high sequence similarity to SpoVB exist, including YkvU in B. subtilis and a number of proteins in the genus Clostridium. [Cellular processes, Sporulation and germination].	1.46582e-119
NZ_CP048209.1\|WP_162360517.1\|3765321_3767055_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	6.15423e-82

>NZ_CP048209.1|WP_162357844.1|3751959_3755352_-|methylmalonyl-CoA-mutase-family-protein
MEPQMVRPIHHVRFVTAAALFDGHDASINIMRRILQASGVEVIHLGHNRSVQEVTDAAIQEDVQGIAISSYQGGHIEYLTYMHDVLQQAGAGHIRIFAGGGGVIVPAEIKALHEYGIARVFSPDDGREMGLQGMINYMIQACDFKPPRQAAEELAALQSRSRSAAARLISLAEDQASKAQLDDAETAVLAQLRANAPAAASVPVLGITGTGGAGKSSLTDELVRRYLDRFPDRSIAVISIDPTKLKSGGALLGDRIRMNAVHGPRVFMRSMATRGSKSEISEAATDAVAVAKQAGYDFVIVETSGIGQGGAAIVDISDVTMYVMTSEFGAASQLEKIDMLDYADIIVINKFERRGSEDALRDVRKQFKRSRQAFDIPDERLPVFGTIASQFNDSGTTELFRELMRIVEAKTGGSWALPEADDWLPGAAGAASNPAASTAADAAGNASKQASKNNSKHETINDMMKTTIIPPERTGYLSEIIHAVRRYRAFAEEQVAAARKLAALRTARQQIAADDGSHLSEAEAVLFAARLDAMIAACEAGMHPDSRRLLEAWPSVRETYGQERLIANVRGKEVVTELTVHSLSGSRIPRVSLPKFEDDGELLRWLLKENLPGSFPYTAGVFPFKRTDEEPKRQFAGEGTPERTNRRFHYLCRNDDAKRLSTAFDSVTLYGQDPSEQPDIYGKIGNSGVNVCSLDDMKKLYDGFDLCHPAVSVSMTINGPAPAILAMFMNTAIDQQVDRFAAKHGRQPDAAEYAAIKAATLQSVRGTVQADILKEDQGQNTCIFSTEFALKMMGDVQQYFIDHRVHHYYSVSISGYHIAEAGANPITQLAFTLANGFTYVEYYLSRGMRIDDFAPNLSFFFSNGLDPEYCVMGRVARRIWAVVMKHKYGANERSQKLKYHIQTSGRSLHAQEMDFNDIRTTLQALMAIYDNCNSLHTNAYDEAVTTPTESSVRRAMAIQLIINRELGLAKNENPLQGSYIVEELTDLMEEAVLLEFQRLHDRGGVLGAMETGYQRGKIQDESLHYEQLKHSGELPIIGVNAFVDPNPARQPDDIELARSTEAEKREQIRHLAAFRQQHQDGSEAALERLKQAARQDGNVFEALMDVVKSASLGQITRALYEVGGQYRRNM
>NZ_CP048209.1|WP_162357843.1|3751377_3751938_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MKIYTRTGDKGQTSLVYGTRISKHSARVNAYGTCDEANSMLGLALAWLGKGDEWTPLRQTMHVVQTKLFHVGAELATPTRMKVAWPITDADVRELEDRIDELEAALPPLGNFILPGGSPCGAALHAARTVVRRAERMAVDVWKEEDISPVVLTYLNRLSDLLFVAARFVNHQEGVVEQGLHQDETP
>NZ_CP048209.1|WP_162357842.1|3750635_3751202_-|methyltransferase-domain-containing-protein
MNAYEPLKLVIGAGDYNNNPGWLQTQESDLNLLNRPQWEARFPAAGIDAVVAEHVWEHLDAEEGVAAAKCCFDFLKPGGYVRCAVPDGYFPDEAYQRIVQVGGPGPADHPAASHRIVYTYRTLVTMFEAAGFQVKLLEYCDEQGRFHSIDWNEDDGLVYRSLRYDHRNADGILRSVSLIVDAVKPHQA
>NZ_CP048209.1|WP_162357841.1|3750000_3750621_-|NUDIX-hydrolase
MQLKWLDWAKQIQAISQAGLAYSKDMYDLERFEQLRSLSIEIMHAYTDVETTKIRDLFASDSGYQTPKVDVRGVIIDEEDRILLVKERLDGAWALPGGWADIGLSAKENVVKEVREEAGLDVTASELLGIADKKFHAHPPSPNHVYKIFIRCDVRGGQAAAGMETTEVGYFGEDELPELSLERNTPEQIRALFEMKRHPERRLLFD
>NZ_CP048209.1|WP_162357840.1|3748277_3749831_+|stage-V-sporulation-protein-B
MAQPERSFMRGTLALSIAAFINRILGFISGMFVARVLGAEGIGLLMMAHPLVPLVITITELGLPVAISKLVAEAQAQGNRNKIRRILHVSLVVTGALSVTLTAVSLLGSHWIASLLLSDKRAYYAMIAITPIAPIVAVSAVLRGYFRGIQQMRTIAASDVLEHTVQIACVLALVHVLMPYGVAYAAAGAMAASVLSEATGLLFLFASYKLRGEQKTAGETWAAHLKQGKGTLSELLKIGLPTTGQGVVQSLYGAFQPLLISTSLAMAGISTALATKQFGLLAGYAFPLLFMPSFITQSLSTALVPAIGEASANKNGLLMHERMNQALRLGLLIGAPATVILFVWATPLTTLIYGSPEAGMLLKILAPIFFLHYFDAPLHAILLGLGRASATLWNFTAATAFKAVSIFVFGSQFGIVGVAFGIGVGIVMQTLLNFFSISGSIGIYVPIQPYIKVGICMTFMALCGQVIMDFMTSELGLSQLWSVIGSIALALLLYFVALLTSNTLHWKITRHTIGIRW
>NZ_CP048209.1|WP_162357839.1|3747067_3748066_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MKQIQAFGPQDLRLVDVAEPQAGEGEVIVDVKACGICGSDKWCWHVTEHSDYVAGHEVAGIVAQAGPGVVRLQPGDRVAVNNVKGCGVCKACKEGAYVRCARPITHMGFGFSEKIAVPERNCLPLEPEIGYEAGSLIFDNWGTPYAALSRTSIGEGDRVAVTGCGPIGLAAAALAVLRGAKVAAVDPIEERRAAAIRMGAEIALKPGEDTEERLRTWSGGEGVGYVVECSGKAASYELAFGALRIGGTIVVIGEGARFEFQSSRLIGKHIQITASLYAGMKDGEAVQRLMAQGAIDPMAIVTHRFAMEEVPGVFGQVVEGAGGLLKTIVVQD
>NZ_CP048209.1|WP_162357838.1|3745484_3746855_-|helix-turn-helix-domain-containing-protein
MDIRKIGAYISTLRKEKSMTQAEFAMKVNVSHQAVSKWERGESMPDIGLLPTIGRLLGISIDELLAGESRIVPAQAQEAPAVVPAAPEREALLKVEAAADTANEAAVSQEAAPASAESMEATPVAKQDAVTAEAVDAVADTSLGVSGAGLKALEALEAPEALDALEGLKALEGLKALEALEAPGAAEAVDSAEAGEIGESVDKDEQPHEEAEEADGEYPSLRSIMDLAPFLGSDTIDEMIGYVEDGRLNGDVLQSLAPFISRSTLARLVSKAANGTFDIRQMVSLAPFLDTEHIDQLVRQAEDGKIEWRFVQELAPFIRRDTLARLVGKAAGGTLDIRELVSIAPFLNAEHIDQLVQQAEAGRIEWRYVQELAPFIGRQTLDRLVDKAVDGDVGFDQVVELAPFLSKESLEKLMDHVTIGELGADRLSELAPFLNKETLEKQVRRMLSRTLARKAE
>NZ_CP048209.1|WP_162357837.1|3743853_3744999_-|hypothetical-protein
MPDSLELAEAVRSAIYPLDSRCSAAGGKASAAIRRDNAFDLIGSGDDGIRLASSAVADLFGMTPASQAVQRLFALAQDTRDIVGLRSALRALPASAVLAYGKLVSTLSKLRAPIVVELATPAGLAGETELRPEQLNAAAAYIEETRVDSVYLKVRGSLQGFHPAKKLFRLEGDDGLSYEGGMTAELRKRFAKEAPRIALPLIAEALIERRTTYRPSIEAESTVDVLAELDTDPGENREELLPKLQRLHDRLNAALDSEDGIEQSAPVSAADYEALAELADRLLASNPHKGARRAIEPADLSDMHALLADSRPIARLALSDGLVLAEDDYDADSYDAGQAARAAKRKAIAERQKLAAAAYADSVKLAGRLLRIIDSLLDDAP
>NZ_CP048209.1|WP_162357836.1|3742840_3743596_-|hypothetical-protein
MKLTFEQKASMLKNGYIHVPGVIPKLMVDHAVKHINHSVGQGMDPAQMQTYRAQSFCPELQAQSPISGLFNDTPVKSLVEDLLGEGSALPVNAGQIALRFPSLQDPPAVARPHLDGMYSPTNGVKEGTIGNFTMLVGVLLSPVREQYAGNFTVWPGTHTQYESYFREHGPEALLNGMPPVELPDPVQTLGEPGDVFLVHYQLAHSVAQNASPFPRYAIFFRVKHTEHNQDWRAPMKDIWLHWPGIRSIMNG
>NZ_CP048209.1|WP_162357835.1|3741317_3742769_-|serine-hydrolase
MKLHCALPRSTPEAQGIASSAIAGFLDAVRDRGFEVHGFMLLRRGQVAAEGWSSPYGPEHPHELYSMSKSFAATAIGIAEAEGFLTLNDKVVDFFEDERPETISPNLAAMTIRHLLMMGTGQTEAIDDWTPGEDGWVRRFLAAPVPNVPGTHFFYNTPATYMLSAILQRVAGQTLHDYLVPRLFAPLGMTGTSWKTCPHGVTVGGSGLRLTTEAIAKFGQLYLQGGEWEGRRLLTEAWVREATRFHIANGSEPDNDWTQGYGYQFWRCRHGAYRADGAFGQMCVVMPEQEAVLVLTSGSEDKHGLLNTVWETLLPAFSPDALAADEQGNTALAERLRAFRFDEPQAETASPIEAVIQDRTYRMEPGHLQIESIAWRFEDRHAICVLRNVFGEQRIRLGRGSWQPSRVRFAAWSLESEQPVEGSFSWQDPHTLEFRLLFVETAFAYRFVCRLDDPLLSLEVTSNVCLEWEPCHVAIRGERLVTA
>NZ_CP048209.1|WP_162357845.1|3755635_3756886_-|3-phosphoserine/phosphohydroxythreonine-transaminase
MLLSLPAPPVIAEPSGSNPKRFDQVGWHRERTLLVPIRRGAFLRFRKGRGRCPLERIHNFNPGPAALPLEVLRQAQRQLIDYRHGGMSIMEMSHRSSDVERLFEETGQLLLKLLGLDASYTVLTMGGGASMQFAMLPLNAKESGKAGGYVVSGSFSEKAYQEARFVGDATVLASSKNANWRTLPAVDDLPLDPAMAYVHMTTNNTIEGSQFRHFPDTGAVPLIGDMTSDMLSRVIDYRRFAMCYASAQKNLGPAGVTVAVVRKDLLDVFAKVRQLPSILRYSTYAQHKSMYNTPPVHAVYMMKLVLEWTERQGGIAAIEQENRRKAELIYGVIDQSDGFYDGLIAKSDRSMMNMTWRMADEAMEKRFVLESEANGFDGLAGHRSVGGIRASAYNAVPYTACKALAEFMLDFRQRNG
>NZ_CP048209.1|WP_162357846.1|3757544_3758522_-|aldo/keto-reductase
MEYRVLGRSGLRVSEVSLGCWAIGGPSWRDGEAVGWSGNDDNASLAGLKRAFELGINHFDTADVYGDGHSERVIGRFLKEVPRDQVVIASKVGWFRGTAPNAMQPIHIRHQLEQSLMNLGTDYLDLHFFHNTNFGPDDLYLEEAADTMRQLQKEGKVRVIGQSGYGYRDFMRVCPVTRPDVLQFHYNAFGNEFDKPDTNLFRWADEQNIGMVLFGPLAQGLLLDKFDPENPPQFGDGDIRASNSSYTKERLLEIRRRLTPIKERFGTDVQDLVRVAIQYALAQSPNACVIPGFKNAKQVESNAQSAGKPLSAEDAAFIRSVIQGA
>NZ_CP048209.1|WP_162357847.1|3758715_3760287_-|MFS-transporter
MTNISPRQIRWIVTGLMLGLLLGSLDQTIVSTAMPHVIAELNGFSLYSWVFTIYMLTSTTAVPIFGKLADLFGRRLVYLIGMGLFLIGSALCGLSHDMTQLIIFRAIQGIGAGALMPIAMTIIGDIFPPDRRGKMQGIFGAVFGLSSVIGPAVGGFIVDHMAWQWIFYINLPFGIFAAIILSIALKESKGTEKKSIDWGGASTLTGAIVAFLLAIEMGGSGSSDGGMKHYAWGSPQILGLFGAALVLILLFLWIESKVKEPIIPLKLFANRSISVSSIVGFLMGMGMFGAITYIPLFSQAVIGTSASHSGYILTPLMLSLILSSIIGGRLITKFSYRSIVMTSMAIMTVGYLLMSQMGTGTSSFELVLYMIVVGLGMGALMPVLTIAAQSAVGHELRGVATSTTQFTRSIGGTVGVAIMGVIMSSRMTDGIADIRSDFADIPADQLNQLANPQALLQPEVKATIPAKLLGALQSILSDAITSVFVIGIIVVLLGLISAFFYGKLRMPKREAGAAPVKAAVDMH
>NZ_CP048209.1|WP_162357848.1|3760283_3760754_-|MarR-family-transcriptional-regulator
MSDGKEAKLAELQLLMERWFQRAKNRMKTLENPFNLANGHIFVLMHMYRVGTCKVNDAARMLGITSGAATGLTDKLVTLGLVERTRQEEDRRVVKLSLTAQGKDTVEQTWKQRREWFTSIVGRLDDSQIDIVLNAFTLLYRMLDDNQDQQNKEVER
>NZ_CP048209.1|WP_162357849.1|3761129_3762053_-|tyrosine-type-recombinase/integrase
MPNHHELDEVYGAQTRAFRIWMKQAGYTDTTQKEYMREVYAYLHSLDELAVEQAGKMHVISFLVSKQQATGDRTRNRTLSAIRSFYAALIDFEMTARNPAMEVKKSKTEKNKKPVYLEEEELALSLAFIDGRYRNRNLAIFLLMSYCGLRVGEVHRLNRSDYKKAKGTIEVFGKGRKWNEIPVPEALAAMLTEVERERIEPYREKEDAFFVSQKGKRLSIRQIQKIAGQTFEAFKRQYPKLADMKLSCHKLRHTFATMLLRNGVDIRVVKELMGHASIETTMIYTHVNDQQKKQAMSTINIPLHAIG
>NZ_CP048209.1|WP_162357850.1|3762376_3763486_-|alpha-hydroxy-acid-oxidizing-protein
MSIFQRCTYSFGENRAKNVLAAGPFGYVCGAAGAGDTHRGNIEAFQHYRIRPRVCCDITKRDLSVSIFGTRFPVPFLLAPIGVNTILHPDGELGPARAAAKLGVPYILSNVSSVPMEKVAEAMGDGIRWFQLYPPKDQELTKSFLKRAEDSGFKAIVVTVDSTILGWRETDLQNAYLPFLTGQGMGIYFTDPVFCSKLREAPHNNVKEAALKALEEGNNTCFTWKELAFIREQTRLPLLIKGTTHPDDALLAMEHGVDGIIVSNHGGRQLDGAVATLEALPAIVESIQGKIPIIMDGGIRRGADILKAIALGAAAVLIGRPYAYALAVAGKSEVEEVIKHLIAETELQLAISGRSSKNDVNPSLLMKVK
>NZ_CP048209.1|WP_162357851.1|3763658_3764249_+|DUF421-domain-containing-protein
MNPNFIWEAVTVLLIGYCLQRIIGKKTAGEMTGLEIITLLSMASMIGHAVRGDGLLRTIITLCIFVTLLLTIQFLAIKFNRIEKWVMGEATLVIKNGQILTANLKKLRMSVDQLEAKLREKGIISFTDIKTATIEMSGEIGYELMNHAKPVTLGDLDKIVAQLLQQQQPQQPKQKDNLFDEVVRDGHHKYIPSELV
>NZ_CP048209.1|WP_162357852.1|3764267_3765278_-|phosphotransferase
MQQANLNKWWIDDPADPGRLTLQDADVDRLAQRISPGASAVDLGGTMSLNVKIEPDNLVLRIHQAFVSRQRLSAVQRIRSHCAAQGLVTTEPLYRNNQSMFRFRNRWAELETYLPHERLAPTADAYLWMFEAMGVLHLALERFEHPVPRPVVSTYAAPSTLRRWLATAESKVRDDADALVIVRRLRDQLQALNRQWVYAPELPVQLVHGDVRLSNVCKGTDGRDVYFDFGFAAYRPRIHDVAYAIAFMLLALGGHKEPESDAWTLIGELISRYEEAARTTLTASERKALLPYTAAVPLYQIVIAGLMNDTGGELRGKLHFLRLGELLLKHPDAIRC
>NZ_CP048209.1|WP_162360517.1|3765321_3767055_-|ABC-transporter-ATP-binding-protein
MSALIIDGIAEGETFRQLITLLVITVLSQAGSSLVIRYMTSRYNTMRLELNYHYEMALSLKIIEMDYASIEDPETHRLRQKMDEVRNLNDGGIWRLIHSFQDMTKYLFGIVFSVSLTLSLFATHGHSDMTGIYRWVGSPYFAILLGLGILANVMLGMYANATTSQKFLRILSETIQINRLFGYYMTNYLNAYHAGKDIRIYNQQKLIASEARTMFDNAGVTLNKMARNEVKYATMTTISTVLISTLIYLFVGLKALAGMISVGAIVRYVGSINEFTGAFTNFMSQLALLRENNANLKVYFDYLALPSQMYQGTLPVEKRAMCLDGDNEYEIEFRNVSFKYPGSEEYSLRNLSLKFRVGERLAVVGMNGSGKTTFIKLLCRLYDPTEGDILLNGINITKYQYAEYMSIFSVVFQDFKLFSFGLGQNVAATVDYDKASVEAAVTEAGFGERYGQLPDGTETYLYKDFEERGIELSGGEEQKLALARALYKDAPFIILDEPTAALDPVAEFEIYSKFNEIVGGKTAIYISHRLSSCRFCDNIAVFHEGALVQRGSHEALVADADGKYHELWNAQAQYYVD
>NZ_CP048209.1|WP_162357853.1|3767186_3769001_-|ABC-transporter-ATP-binding-protein
MTKTGRHSPLHSMFGNLAFLLRKSYQLDKSIVFATIAHIPVIVLLPLLAAYLSKSVVELVTDASDAGTLTVYVLSISAGLLAMHWLNMYIGAKIQFRAFYNRFLYIGLSIDKVMNTDYDNIESNSGQHKMDKANKAMEGDDTGTQQFFAQLVKCCSNGIGLLTYSAMLNFLSPWVVLLLFGSTAINYAVNRAHNHWVQRNKDNWVPLERKLSYISKKAGDFEAAKDMRIYGMSGWFRQVSKRLLGERLGWSRKSERRGFIVDVLNVTMTVVRDGAAYGFLLYQVTHNGISAAEFVFFFALITQYSGWLLGIIDSFNALHKTSLAIGDMRDYLDMPDRSNRGAGAALPDASPEIRFENVWYRHDSSDDATIKDINFTIRPGEKIAIVGMNGAGKTTLVKLLCGLYRPTEGAVIAGGRNIASYNRDDYYKLLSVVFQDIYLMPFSIAKNIALCEAHLIDRERLEHVLKLSGLHEKVQSLPEKEETQLLKSVRDNAIDLSGGEKQKLALARALYKGGSIIVLDEPTAALDPIAENEMYLKYNELTASATSIFISHRLSSTRFCDRILFLENGRIVEEGSHAELMALGGKYAGMFELQSHYYKEAVGV

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Crispr_ID: NZ_CP048209_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_12

3786166-3786251

Orphan

Consensus_repeat	Method
TGACGCACGATGCCAGACCGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_12

>merge|NZ_CP048209|12|3786166-3786251|CRISPRCasFinder
TGACGCACGATGCCAGACCGCGATCTCCTTGTCGATTCCACCGATAGTCGTTGCTGCTCGCTTGACGCACGCTGCCAGACCGCGAT

>NZ_CP048209|12|11|3786166-3786251|CRISPRCasFinder
TGACGCACGATGCCAGACCGCGAT	CTCCTTGTCGATTCCACCGATAGTCGTTGCTGCTCGCT
TGACGCACGCTGCCAGACCGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162357871.1\|3789609_3793482_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367090
NZ_CP048209.1\|WP_162357866.1\|3783848_3784817_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP048209.1\|WP_162357865.1\|3782324_3783605_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|119353
NZ_CP048209.1\|WP_162357859.1\|3775192_3775537_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357867.1\|3784930_3785941_+\|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl\|CDD\|274464
NZ_CP048209.1\|WP_162357872.1\|3793851_3794826_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048209.1\|WP_162357876.1\|3800113_3801157_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
NZ_CP048209.1\|WP_162357868.1\|3786349_3787327_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP048209.1\|WP_162357863.1\|3779709_3780519_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP048209.1\|WP_162357874.1\|3796947_3798228_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048209.1\|WP_162357858.1\|3773068_3773959_+\|DUF5050-domain-containing-protein	unknown	unknown	gnl\|CDD\|379846
NZ_CP048209.1\|WP_162357861.1\|3777228_3777573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357864.1\|3780575_3782078_-\|amidase	unknown	unknown	gnl\|CDD\|180715
NZ_CP048209.1\|WP_162357873.1\|3794822_3796277_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357860.1\|3775841_3777158_+\|glycoside-hydrolase-family-16-protein	unknown	unknown	gnl\|CDD\|185693
NZ_CP048209.1\|WP_162357862.1\|3777935_3779570_+\|glycoside-hydrolase	unknown	unknown	gnl\|CDD\|119353
NZ_CP048209.1\|WP_162357870.1\|3788608_3789427_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162357875.1\|3798305_3799022_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP048209.1\|WP_162360518.1\|3799042_3799915_-\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_CP048209.1\|WP_162357869.1\|3787316_3788492_-\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|238434

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162357871.1\|3789609_3793482_-\|hypothetical-protein	gnl\|CDD\|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	6.73353e-10
NZ_CP048209.1\|WP_162357866.1\|3783848_3784817_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	2.42595e-61
NZ_CP048209.1\|WP_162357865.1\|3782324_3783605_+\|glycosyl-hydrolase	gnl\|CDD\|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	6.94037e-28
NZ_CP048209.1\|WP_162357867.1\|3784930_3785941_+\|1-phosphofructokinase-family-hexose-kinase	gnl\|CDD\|274464	TIGR03168, 1-PFK, hexose kinase, 1-phosphofructokinase family. This family consists largely of 1-phosphofructokinases, but also includes tagatose-6-kinases and 6-phosphofructokinases.	1.6437e-100
NZ_CP048209.1\|WP_162357872.1\|3793851_3794826_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.00129e-39
NZ_CP048209.1\|WP_162357876.1\|3800113_3801157_+\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	5.48773e-47
NZ_CP048209.1\|WP_162357868.1\|3786349_3787327_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.24562e-65
NZ_CP048209.1\|WP_162357863.1\|3779709_3780519_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	8.11497e-20
NZ_CP048209.1\|WP_162357874.1\|3796947_3798228_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.59796e-42
NZ_CP048209.1\|WP_162357858.1\|3773068_3773959_+\|DUF5050-domain-containing-protein	gnl\|CDD\|379846	pfam16472, DUF5050, Domain of unknown function (DUF5050).	2.19002e-51
NZ_CP048209.1\|WP_162357864.1\|3780575_3782078_-\|amidase	gnl\|CDD\|180715	PRK06828, PRK06828, amidase; Provisional.	0
NZ_CP048209.1\|WP_162357860.1\|3775841_3777158_+\|glycoside-hydrolase-family-16-protein	gnl\|CDD\|185693	cd08023, GH16_laminarinase_like, Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.	9.74013e-26
NZ_CP048209.1\|WP_162357862.1\|3777935_3779570_+\|glycoside-hydrolase	gnl\|CDD\|119353	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.	7.25766e-62
NZ_CP048209.1\|WP_162357870.1\|3788608_3789427_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.91133e-27
NZ_CP048209.1\|WP_162357875.1\|3798305_3799022_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	2.1808e-68
NZ_CP048209.1\|WP_162360518.1\|3799042_3799915_-\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	2.89599e-137
NZ_CP048209.1\|WP_162357869.1\|3787316_3788492_-\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|238434	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.	2.34995e-148

>NZ_CP048209.1|WP_162357867.1|3784930_3785941_+|1-phosphofructokinase-family-hexose-kinase
MDNQLFGNMQLNDMRLDAPSNQELTLPIVCASLNTAIDKRLMLPGFGLGQVNRAARIEATAGGKGLNAARVIQSLGAPVMAAGFAGGANGSWVKNRLDAIGLDHQLVLIDQETRICLNLIDESTGVSTEVLEPGPDISPSEKERFLTLWRSLCLPGRWMTLSGSLPRGLGDDYYARLVGAARQAGAHVVLDTSGTALSLGAASGPHTVKPNEDEFRSWTGDDPREHDAVRRLAAKLGEAGVRTVIVSLGRDGCVAATPDGELWRAVPPAVQAANPVGSGDAFVAGWTVACARGMEMPEALRFAVAAGTANAQSAGTGQVSLADTMALCARVEVERA
>NZ_CP048209.1|WP_162357866.1|3783848_3784817_+|sugar-kinase
MRNAVMPAKKIIVIGELNVDLIFADKDIRPEPNREKLVREFRLALGSSSAITAAGLAGLGYDVAFVSIVGDDEFGAYCRKELVRLGVDAAHVLVDGSRRTGATLSMSDGSDRSLLTYMGTIADVTPELVPEELLRDAAHVHFGSYFLQDGMRPHWAELFKRARQSSLTTSFDVGWDPAEQWDRERLAALLAWTDWFMPSEEEALRIFEAEDIAKLAASLPTSRGAVAVKRGGEGAALFLPDGRVVEGLPYSVEPLDTTGAGDNFNAGFIAAMLEGRSDADALRFANACGALSTLAIGGAGTVTREGVERFLNERITFPADAG
>NZ_CP048209.1|WP_162357865.1|3782324_3783605_+|glycosyl-hydrolase
MRSKSNVVKTSLLAASSALLLFSGAAGAAATPTAASASPPIGILLDGYPLPFPAAPFVADGTTMVPFRAIAEALNVQVDWSNKTQSLTATKAPADANATATTVVLRKNDKKASINGQQQVLAVAPAMKDDSLFVPLKFFSTAFGAAVSWDSVLRTVSIVSPAEPMYAEAFYAISSFKKVALVPKFNAVSFGWTRIDATGNLVLNGRDYYWPKPAGDVTPESIVQDAAAAGSSPNLMAVATDGSGELTKLLQDPTLQSAVIDQLVQLAADNHFSGITLDFEGLGLSGDLAAIQQSYTGFVKLLDQRASAANLKLTLALHPLNSSYRGYDYKKLGELADEIILMAYEYSYDKGPEPMNRVNEAVQLAMKEVPKSKLVLGISLGSENAQSVGDKIGLAKRYGIKGVAFWYLGILSDDTLRAIQNTIALR
>NZ_CP048209.1|WP_162357864.1|3780575_3782078_-|amidase
MTTAYPLPNLQLEEASIAELQLAMEEGRLTSRDLVLAYLSRIAAYDKVGPRINAILEINPDAIFIAESLDAERARAGGRGALHGIPVLLKDNIETGDNMRTSAGSLALEQHVCDRDAFLVQRLREAGAVILGKTNNMTEWANGMSSTMWAGYSSRGGQVAHPYGDYFAGGSSTGSAAAAAMNFAAAAVGTETSASILSPAVQMSIVGIKPTVGLISRTGVIPFTYSQDTAGPMARTVADAAALLNGLIGRDEQDPATWRDAGSIADPGSGSADMRDYTAYLDEEGLRGARIGVFSEVPEHARNGGEFDESLFSQAIRDMKEAGAEVVEAIRIPSFHGPWKWNKMNLEFKHAIDNYLHRLPAHMPVHSLAELIRWNEAHEEKALKYGQDALEYREGLVNPLGGSDYALESVLDLRRAQNDGIDYALREYRLDAILFPAYIGADLSAKAGYPSIAVPAGYQANGRPFGITFAGTAFSEPALIRIAYAYEQRTKHRVKPEIRA
>NZ_CP048209.1|WP_162357863.1|3779709_3780519_-|class-I-SAM-dependent-methyltransferase
MSEIIDYYSSFDEWGRLDREPLEFNVNWHFIRKHLPKEGRVLDNGAGPGKYAMALAKLGLRVTLSDLTPRLVDIARAKAEEFNLVNQFDDFLVRDARRLEGLADDHYDAALMLGPLYHLQAEDDRIQAVRELYRVTKPGGIVFVAVRPRIRKILTALMAPAQWKPLDNMAAIQSFKETGIFDHADQGRFTGAYFFNIADIQPFFERHGFETVSLLSSSGIGGRLTQENWAYWQSRGEEKQLMELIYESAADPYLLGATASHLLYIGRKA
>NZ_CP048209.1|WP_162357862.1|3777935_3779570_+|glycoside-hydrolase
MLRLLSIRQTIVVGLLAVMMASLPLPFPATAAAASSVLPYDDIRSNYATESIVNMTKLNIITGMGDRRFEPDTAVTRAQFITMLDRLLGIAPVTSAIAAFSDVAPAAWYYEWVMPAIQLNIVQGMTAASFEPNRPVSRQEAAVMIARALKQSLSASTAIPTGLYMDQEQVGTWAAAAVMRLTEIGLMGGDQGRFRPQASMTRQEAAVMLNRIWTYPGWKAKLQAPPPSSIQLGWQYGQTTAQFEKQVAQSSVNTVSPRWFFLGQSGALEDQTDASLLLWARQQGKRVWAMVGNHSSQEATHAMLSDAGKRQAFILQLAERVRKNGIDGLNIDFENMMPEDRSAFTAFITALHQQLKTVPAVLSVNVSPDFGTDWTDVFDYHALSVNADYIVLMGYDEHWDGDPEPGSVSSLPWLRTGIDRLLGEAAAGKIILALPLYSREWTRGKDGSYTSEEISLLAQNRAILANKAVTAWDDTLGQYVSAYIDSLLQRRIWLEDGRSLTRKTEFVHTYSLAGSAYWYIGGESTDVWASISNANKYDAYDFTS
>NZ_CP048209.1|WP_162357861.1|3777228_3777573_-|hypothetical-protein
MKRHLPKSAAMLVLVMLLSGCAGTSSASSDDYTAATLFIKVTAKEHSDDYKQKWIVAHNSSMSNAEDIRLIVDSNMVWNLIEVGSEYFATYEGSAAKGYRLSQISHPGDQDTIR
>NZ_CP048209.1|WP_162357860.1|3775841_3777158_+|glycoside-hydrolase-family-16-protein
MTKRIKPALQLFMAAVMAAALFIAWGSDANAKSLSFTASDDAWMWGTTFMGSSTTSLSVYGGQDKKAYLKFTASGAGTIQDAILKVTCVTGGTATVDAYAGTGNNTWTEANLAWNNQPAVGTLLDSKNINFVAGNTYSFRVNSLVSANGTYSIILKATAGSEVAFASKEGANAPQLIVSDGTTPISSEGPSLAGYTLYKDYSFGTSKNVNSLTALSNNFNAYGIAGTTVINSEWQRYQPINATNHVLTSNSLDLTAVANLGGVYDGGISSGQITTKETFYPSNGKTYIFQLRAKIPNGVGTWPAFWMYSPGGTGSTASEIDIFEFFNSPTQNHYDWTGYDHGSGVGDNYYNIMTNQWVWHPGTDFSADYHTYSLVWKEGEIQKWVDGTMVKGTNFLWYGPAPQVLINLAIGGSPNSNPTSATFPAKFSLDYFRVYVKN
>NZ_CP048209.1|WP_162357859.1|3775192_3775537_-|hypothetical-protein
MAALIAAKIAFLVHPRHTGISSEQAERIALRQAEMDGYEDAKLWTRFHTEITTRYFYSESDRKDVLVWSVYVDAAGNPPIKNTPAVIYYIKRNNGAVINTINGMKAGSPSKPLT
>NZ_CP048209.1|WP_162357858.1|3773068_3773959_+|DUF5050-domain-containing-protein
MLKRNLIAMLAALALIVDTTSLAAEQSGSAAVNGTSTGNLNNSGFYVAEGDAIYYNSFSREGGLYRVNEDGSGKTKIADGFYAYMNLVGDELYYSDGWKLTKMKLDGSAKQVLAPSAFHVNVAGDYVYYSNIGPQDGLLYRIKTDGTGTAQLLSSDHISQLVVSGSRIYYTSYYNKLFEMSTDGKSKTKLLTGKTINELNVAGDWLYFNYDQHLYKMKTDGSKLTLLSADDARSINVSGDWIYYSNYGDNKKLTRIRTDGTDREALSQAKSMYIHVIGSHVFYHDMSNMAKLDVTP
>NZ_CP048209.1|WP_162357868.1|3786349_3787327_-|ROK-family-protein
MKLDEAKPMKALVGVDIGGTNTVIGIFDETRTLLKKTVIPTLKPHFPGTTDRPDSFCDALAEAIHALAREAGFTDGVAIVGMGVPGWVDPVLGRAEGASNLGWRGVPFAEQMSRRLGVPVHIDNDVRIYALGEMQAGAGRGYKNALCITIGTGIAVAIVADGRLVRGASFYAGEIGHDAVEGQDGACNCGRRGCVESIVSATGIARLAREALETNGESTSLSRLNRTPTAQDVYTAAMAGDAVAGRIFRLAGEVLSAKVLTAVTLLNPEAVIIGGGVAEAGDLLLGPIRERIQARYTFEKKPAILKAALGDSAGLIGAVSYAASY
>NZ_CP048209.1|WP_162357869.1|3787316_3788492_-|N-acetylglucosamine-6-phosphate-deacetylase
MASKAAYWTNATIYTPAGIVEQGTLVVDDAGTIAAIGGPELAADPAIARHDAGGRLLLPGFIDVHIHGGGGCNVMSGTYAELDGVSRFHAAHGTTAFLATTTTAPLAEIEQALRASADAMNQGVTGAGLIGIHLEGPYLSERRRGAQSKADLRIPTEAEIKRLIDAAAGQIRIATVAPEIDGGMAAVRQFAAGGITVSAGHSDATFEQMRDAVGAGISHTTHHFNGMSPLHHREPGVAGAGLLLSELTTELICDGIHVHPAAVKLLFETKGAMNVCLITDAVTCAGLPDGDYGGVTMHEGQIYLKDGSSLAGSALTTIQALRNAIRFTGYSLERLLPSITEVPARQAGVSDRKGSLETGKDADFVLVDRELDLYETIVGGRSVYARQSHEA
>NZ_CP048209.1|WP_162357870.1|3788608_3789427_-|sugar-phosphate-isomerase/epimerase
MKLALNTLGCPDWTWERIMEEAARLGYDAIEVRGIQDELLLPKCPPFLPERIDSTKEALRGKGLAICCLSTSCVFHAPERYEEAIQEGKATIDLAERLGVPYIRVFGDAIPDKANMEPTIAAVAAGLQTLGDYALRKQVMVLIETHGDFADHDILHDVLNRTHSPAIGVLWDIQVTYKHGGGQRPEATYAKLGPYVRHVHVKDMSGSNENRRLCLPGEGDVPIGACLELLREQGYDGYFSFEWEKRWHPEIEPPDVAFPAFVRYMSAFAQEK
>NZ_CP048209.1|WP_162357871.1|3789609_3793482_-|hypothetical-protein
MRRSLPIETRLRKRGCRMSRATLSLPEQAEPSSVQGGIVMEKLYDLAYDTGFGDPSPSRMKPPAGERLKLFFVPSVKHGYEIVEFIRRTGVDFETVTFDRAWDLNKWGIGDYYDIRAAVDDQHVMIDNLERALVSEEHYDVLVIPAVNGWAHFTPATRQAILRRVEAGAGLVLIRPFNGEDKPKSPELEALSPLVNLFEEGFAVDNNAGEGYPKVRFDLLASGRWSAAAPHYITRGIPFGRLPSEQLAYYPYEAAGEVLIEAEGGAPIAAVKSYGQGRVVAFGYYPRDILPQHKDYTGKESTYDAVIDKWSGVRTGASFAFLDYFYELAYRSVVWAAKREPDCALSVAEQGERSWIIRREGSAASDRLRYRIKDGCDEIVAEGDCGSDGLLRLPESLDDGGAFRIEVEAFAGEGVLEFATFALERPLAASFAHASVNHDALALGETLHAVFRLQGESGVQLVIRVADDFGRVLEQSSPELRIGETLTHAYRAAAAKSMHIEVQADIRRGGRLLQRWSSGGIVVTPSKRRLDDFEVFTAPQNRGHGDFLPLVAERYREIGVTGLYPGSAKTLTMSGASGMGVYWYHRAPYVERKERYYRTRDKRFLVRVPCLNDPSFWEEQRSKITATVSEFRTFGPIAYFANDEGSLTCYTDELDLCFCAHCMREMRVWLRQEYGQLEELNGAWGTAFASWEDVVPHTREEARKTRQFAPWTDHRRFMEHIFVDAYRRIAALVREADEGGVIRMSGCQASTAYSGYDYYRLHQHVGYFEAYGVGNQYEFHRSFAKPGTIIGGWFGYGADGVNAQYGVWHAVYHGLTLCNLFWEYSLLNPDYSLSRSARDLSVPFREIREHGIGKLLLHAAKRDHCGIALHYSMASVRSTAILGDKARFESNRQGWIDMLEDLGYQYDFVATQQIEAGELAARGIKLLVLPYSVALGEGEALAIARFVGEGGTVIGDFQTGLMDHRGRMLEAGSLDGLFGIERLTTEAEPFYINDGFVPNVAFPYFAPGAFEDERMAEFGTRSAAGTPAYRDDFARQVVAVNVREQGKGKAVYLNIALNNYPKLRTQTGEGAALRKLIRSLVGLSGAVKPASLTRADGSPFETGCESFYYAGDGAAYVAVLRKLSRNQALGHDGLAVGAGRERQDAAERLRFAFAEKAHVYDIRERRYVGYADEADFELAEGDTKLFALLPCRATGLRIDAADAWKRGDTAQVRFMLDADGAQSFASVLSVHVYGPDGSREWLYSDNVYAERGECAHAFAIPVNARTGTWTISVKDAATGLEAAHAVTVLD
>NZ_CP048209.1|WP_162357872.1|3793851_3794826_-|Gfo/Idh/MocA-family-oxidoreductase
MIRIGLVGCGWHSRATHGRCLTRYREATGNLFLAACCDVDAEAAESFRTAFGFARAYTDFARMLAEEELDAVWIVVSVEHTASLALQAMEAGIPVFLEKPPGIDAAETRLLRQRAAELGIPHRVAFNRRFAPLTRKLAAILNASRGRRIYSLTYEMIRIDRKDADFSTTAIHAVDAAKFIAGSDYAELRFRYDELPEAGPGVVNMIADGRFKNGVRVQLLCYPYSGIAVEKVTVRGEGFSCELRLPLQEGAGPTASLKYADRGREEVDQAEGDWLEAFGFYDENASFLDGLQQGHSLQDDLRSSQQSIEVMEAIRQRAERYEDG
>NZ_CP048209.1|WP_162357873.1|3794822_3796277_-|hypothetical-protein
MESGASRETVDLGRLYQGPFQIEQDDGWFTIYMATPSAEPVRNPGMGLIAYAWEENGPSLQARSGNETIEEHVERLAKLPFVDVLYIRCDWRHVQTEPGRLNLHPIWEATLQAAERHGLRVAFRVQLSSPNPQPERLAMPDFLIGQVPLVNIGRFEGQDYDYWEPRYDHPAFRAAFRELNGLLAERFDGDPRIEFMDLMMYGFWGEGHTGDLKNPFPDYAAAEHTFMAMTREQVERWRKTPIAVNTQPDISQTGNRTVRAYAMSEDCWVRTDSIILDEPEQIEIIANRAPWTAAVVEDGYYRHFKLDQLKFDSANVDVIANSMLHALDIGGNYWGLWTEAEAIARYHERYPHAIETLRRRLGYRLRPAWIWQRKRIGTDELVIALANDGVSGVPGALWLEATDGTTSLRGKLDKGSPVPGKVGMASLTLPQHWRDIEVRLSLRLEMKPGVFKPVQWACAQRTEADGSLAIRLKSHADTDWRCGI
>NZ_CP048209.1|WP_162357874.1|3796947_3798228_-|Gfo/Idh/MocA-family-oxidoreductase
MIHAAVIGAGSRGMFDLGSYALKRPNEIKFVAVAEPNEERRRKFAEMYGIAPELQFGSWEQLLAQPKLCEALLICTMDKGHFRPTMKALEAGYHILLEKPMSPDPKEALLMAEEAKRRDRILTICHSMRYSGFFRAVKQLLDQGAIGRMMTIQWIENVGYWHQAHSFVRGNWRNTAESSPMLLQKCCHDLDYLNWIVGASCTSVSSFGSLSHFREENAPEGSTDRCTDGCKVEHECPYSALKWYLNEKDAWPQKVVSLEPTLDARLKALREGPYGRCVYRCDNDVVDHQVVTLQFDNDVTVAFTMTAFTRETSRSFKIMGTKAELIGHTEQNEIEIRHFSGRTEIIRPEEQEGGHSGADTLLMQSFVRQVETQSEGVSNGMESARSHLLVFAAEQSRLTGETVHFDRYVDRLRTEYAQAAEAVQEV
>NZ_CP048209.1|WP_162357875.1|3798305_3799022_-|DeoR/GlpR-transcriptional-regulator
MQSKAELRRTKMLERIKEGGKATVEELVQATDSSVATVRRDLEVLERSNHIIRTLGGAVYDENGGRNAELAFADKRFVNLAGKERIAAAAAALVKEGDVVCLTGGTTTFLIARALKNRRSLTVVTNAVNIANELIDAEGVQVVVTGGVMRHKSSELIGPLAESIIEKLNITKMFLGVDGASREHGFTTHSELEARIAQLLIARAAEVYAVFDQAKQERTALFTIVPYDQVTGVITDRE
>NZ_CP048209.1|WP_162360518.1|3799042_3799915_-|class-II-fructose-bisphosphate-aldolase
MSLQASTEMLQAAREGKYAVAAFNVHTLEMLQAVAEAAAETQSPLIIQSTVGTVNHLGPDYIAAAAAVAAKRTGTPVALHLDHCTDYDLIVRCIRAGYTSVMIDASMYPFEENVARTAQVMAAAAAAGVNVEAELGKVGGVEDDIVVDERDALLADPDECAAFMARTGVHTLAPAIGTAHGIYKGTPNIDFARIARIADLVSAPLVLHGGSGIPADQVRQAVSLGMAKMNIATELRIAFSDAIKQVFGRLPDENDPRKYMVPAKEAVKRLAMEKMELCGCVGKAANIVNR
>NZ_CP048209.1|WP_162357876.1|3800113_3801157_+|SIS-domain-containing-protein
MSLTYEEIKAQYTALKQTFDYLLSQRSQIADFFRAHAGSSVAFVGCGSSYAISESGAFSMRLRAKRRAIALAGGDLMLNADGYVPLLADAVLIAPSRSGATSEIVEAIRLAKQRAPVPVLAVVCVPDSPVSAMADLTLTLPWAFDRSVCQTRTVANLYAANLMLAAFIGEDETVIDQLALVIAQGEAYMNRVEAQIREAGDFDWTNVVLLADGEVHGLAAEGAIALTEIAKAQAHAFHVLDVRHGPMVTVGPDTLVIAHLTSRQPEQQRKLLQDIRSRGAKVIAFGDASANLSPDDAELVIQTESELSLPVQGIPFLFIPQIVALGRAERMGINPDEPEGLTAWVKL

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Crispr_ID: NZ_CP048209_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_13

3872434-3872573

Orphan

Consensus_repeat	Method
AATCCTTCCCAAGGGCAGGATTTTGGTGCTC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP048209_13

>merge|NZ_CP048209|13|3872434-3872573|PILER-CR
AATCCTTCCCAAGGGAAGGATTTTGATGCTTGCACCGGGAAATCGCGTGATTCTTTCCCGTGGGCAGGATTTTGGTGCTCCACGGGCTCCACGGCAGAATTTCCCGTGAAATCCTTCCCAAGGGCAGGATTTCGGTGCTC

>NZ_CP048209|13|1|3872434-3872573|PILER-CR
AATCCTTCCCAAGGGAAGGATTTTGATGCTT	GCACCGGGAAATCGCGTG
ATTCTTTCCCGTGGGCAGGATTTTGGTGCTC	CACGGGCTCCACGGCAGAATTTCCCGTGA
AATCCTTCCCAAGGGCAGGATTTCGGTGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162357927.1\|3863592_3864066_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP048209.1\|WP_162357926.1\|3861988_3863410_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048209.1\|WP_162357941.1\|3880118_3881012_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP048209.1\|WP_162357928.1\|3866745_3867756_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP048209.1\|WP_162357934.1\|3872821_3873964_-\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP048209.1\|WP_162357942.1\|3881015_3881381_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP048209.1\|WP_162357938.1\|3876975_3878379_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357935.1\|3874296_3875283_-\|peptide-methionine-(S)-S-oxide-reductase-MsrA	unknown	unknown	gnl\|CDD\|184456
NZ_CP048209.1\|WP_162357931.1\|3868783_3869416_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223645
NZ_CP048209.1\|WP_162357930.1\|3868390_3868660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162357936.1\|3875544_3876030_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP048209.1\|WP_162357937.1\|3876283_3876847_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|240030
NZ_CP048209.1\|WP_162357932.1\|3869681_3870140_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP048209.1\|WP_162357940.1\|3879432_3880119_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360524.1\|3864214_3866392_-\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_CP048209.1\|WP_162357939.1\|3878646_3879306_-\|spore-cortex-lytic-enzyme	unknown	unknown	gnl\|CDD\|213747
NZ_CP048209.1\|WP_162357929.1\|3868056_3868362_-\|MTH1187-family-thiamine-binding-protein	unknown	unknown	gnl\|CDD\|376658
NZ_CP048209.1\|WP_162357925.1\|3861251_3861884_-\|phosphoribulokinase	unknown	unknown	gnl\|CDD\|223645
NZ_CP048209.1\|WP_162357933.1\|3870401_3871475_+\|abortive-infection-protein	unknown	unknown	gnl\|CDD\|381626
NZ_CP048209.1\|WP_162357943.1\|3881649_3882417_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197317

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162357927.1\|3863592_3864066_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.25202e-16
NZ_CP048209.1\|WP_162357926.1\|3861988_3863410_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.32957e-68
NZ_CP048209.1\|WP_162357941.1\|3880118_3881012_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.37951e-59
NZ_CP048209.1\|WP_162357928.1\|3866745_3867756_-\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	3.62811e-06
NZ_CP048209.1\|WP_162357934.1\|3872821_3873964_-\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP048209.1\|WP_162357942.1\|3881015_3881381_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	7.13903e-28
NZ_CP048209.1\|WP_162357935.1\|3874296_3875283_-\|peptide-methionine-(S)-S-oxide-reductase-MsrA	gnl\|CDD\|184456	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB.	8.15461e-106
NZ_CP048209.1\|WP_162357931.1\|3868783_3869416_+\|hypothetical-protein	gnl\|CDD\|223645	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].	9.30868e-17
NZ_CP048209.1\|WP_162357936.1\|3875544_3876030_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	3.43636e-33
NZ_CP048209.1\|WP_162357937.1\|3876283_3876847_-\|NUDIX-hydrolase	gnl\|CDD\|240030	cd04673, Nudix_Hydrolase_15, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.04569e-28
NZ_CP048209.1\|WP_162357932.1\|3869681_3870140_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.88588e-15
NZ_CP048209.1\|WP_162360524.1\|3864214_3866392_-\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	9.34029e-116
NZ_CP048209.1\|WP_162357939.1\|3878646_3879306_-\|spore-cortex-lytic-enzyme	gnl\|CDD\|213747	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme. Members of this protein family are the spore cortex-lytic enzyme SleB from Bacillus subtilis and other Gram-positive, endospore-forming bacterial species. This protein is stored in an inactive form in the spore and activated during germination. [Cellular processes, Sporulation and germination].	1.40409e-71
NZ_CP048209.1\|WP_162357929.1\|3868056_3868362_-\|MTH1187-family-thiamine-binding-protein	gnl\|CDD\|376658	pfam01910, Thiamine_BP, Thiamine-binding protein. The crystal structure of two of these members shows that this domain has a ferredoxin like fold and is likely to exists as at least homodimers. Sulphate ions are are located at the dimer interfaces, which are thought to confer additional stability. Although the function of this domain remains to be identified, its structure suggests a role in protein-protein interactions possibly regulated by the binding of small-molecule ligands. Solution of the structure of the hyperthermophilic anaerobic Thermotoga maritima sequence, UniProtKB:Q9WYV6, shows that this has a beta-alpha-beta-beta-alpha-beta ferredoxin-like fold and assembles as a homotetramer. It was possible to identify a pocket in each monmer that bound an unidentified ligand. It was also found that it bound charged thiamine though not hydroxymethyl pyrimidine. It is proposed that it is transporting charged thiamine around the cytoplasm. Under oxidative conditions this bacterium is under stress, and the transcriiptional unit within which this protein is expressed is up-regulated in these conditions, suggesting that the chelation of cytoplasmic thaimine is part of the response mechanism to such oxidatvie stress, which is mediated by this family.	8.20157e-39
NZ_CP048209.1\|WP_162357925.1\|3861251_3861884_-\|phosphoribulokinase	gnl\|CDD\|223645	COG0572, Udk, Uridine kinase [Nucleotide transport and metabolism].	5.96019e-22
NZ_CP048209.1\|WP_162357933.1\|3870401_3871475_+\|abortive-infection-protein	gnl\|CDD\|381626	cd19608, GH113_mannanase-like, Glycoside hydrolase family 113 beta-1,4-mannanase and similar proteins. Mannan endo-1,4-beta mannosidase (E.C 3.2.1.78) randomly cleaves (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans and is also called beta-1,4-mannanase, endo-1,4-beta-mannanase, endo-beta-1,4-mannase, beta-mannanase B, beta-1, 4-mannan 4-mannanohydrolase, endo-beta-mannanase, beta-D-mannanase, 1,4-beta-D-mannan mannanohydrolase, and 4-beta-D-mannan mannanohydrolase. (1->4)-beta-linked mannans are polysaccharides with a linear polymer backbone of (1->4)-beta-linked mannose units (in plants and fungi) or alternating mannose and glucose/galactose units (glucomannan in plants and fungi, and galactomannan and galactoglucomannan in plants), such as in the hemicellulose fraction of hard- and softwoods. Complete degradation of mannan requires a series of enzymes, including beta-1,4-mannanase. According to the CAZy database beta-1,4-mannanases are grouped into various glycoside hydrolase (GH) families; GH family 113 beta-1,4-mannanases include mostly bacterial and archaeal sequences.	2.74907e-12
NZ_CP048209.1\|WP_162357943.1\|3881649_3882417_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197317	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds. Their substrates range from nucleic acids to phospholipids and perhaps, proteins.	5.94304e-103

>NZ_CP048209.1|WP_162357933.1|3870401_3871475_+|abortive-infection-protein
MNEDHALSLSRKGIHYDVGTYTRSQAYSSRERFEPEIVRQELAIIRHDLHCNAVRISGQDIDRLTAAARFAIEQGLEVWFSPSYVNAGEEATLAYLAACAEAAEELRQLSPDVIFVVGCELTFFMKGLVSGETAFDRMQTLMNPWKLIKNTLRKGSFHKRLNAFLSKAAAVVRARFHGKLTYASGVWEHVDWAPFDYVGVDCYRDRFTRRTYREKLRSYAKHGKPVIVLEFGCCTYAGAGEKGGYGWAIVDRDQSPPRLKGDYARDEHEQTRYMEELLTIFEEEQVNGAFWFTFVMPFYPGSDRPQFDLDMASYSVVKTFGEGDSDGSSQRETAYPGMPWEPKASFRRMAELYGESN
>NZ_CP048209.1|WP_162357932.1|3869681_3870140_-|MarR-family-transcriptional-regulator
MNKEAGQIAASYMQLIPLLYRAMDNPNDEDKEWKAPAEITHLQVHILEELYQHPDGIAMTPLSRLIRVSKQQLTPLVAKLEEKGYVSKHADASDKRIVRLRLAEKGQQLVNERWGNFHHGLVRRMEGLNGEDRSDLAYAIEKLTHILRRLPT
>NZ_CP048209.1|WP_162357931.1|3868783_3869416_+|hypothetical-protein
MTSRSPDHALTAAANAIAHAVRTAQAMHAIPFIAAIDGGSGAGKTTLAHLAAEQLAEWRIPAAVVHIDDFFDASVPDAEWDRCTDEQKCRRCMDWRRLRREALEPLLAGHGANYRPFSFETDDRLAAHTVTVQSAAVILLDGIYGTLPELLDLIGLSILIEVPPATRYRRHNERENSEDTEWHARWDSAETYYFTRLRPPSSFDVVIELA
>NZ_CP048209.1|WP_162357930.1|3868390_3868660_-|hypothetical-protein
MHASPGLVVLWIVLVLLPAAAGWRRRWRPFAVYALGCVIFIVEANRGNDGWDDLADVATLVVIVLPLYVIASVVWLIQIVVGKYRKKHT
>NZ_CP048209.1|WP_162357929.1|3868056_3868362_-|MTH1187-family-thiamine-binding-protein
MAIVQVTIVPLGTSSPSVGAYVAAVIDVLREAPEPIHYELTPMSTIIEGELDNLLAVVRRMHEVPFEHGAMRVSTSITIDDRRDKKGSMEQKLKSVEEKLK
>NZ_CP048209.1|WP_162357928.1|3866745_3867756_-|phosphotransferase
MDQQQHLHPEDLTSFAIQTFGHDYRPAGLTRLYGGAQKVIYDVAFTNGFHCLLYIWDISQNFFKEEIEEADRAWHSYGADLFALNHDFLTRHGIPTPALYALNRERERYSFDYAFVEYVTGPKLETYLTEPGTGSASGPSASAKPDELMEQFADIVKRMHGIKGFAYGQAVADNVNAADQSIPCHRHQLMNAEQQLAYAARHLEEAAANRDRLLKKLYELESRIAPRRAYGFIHGELGPDHVIVKNDAELYLIDIEGASFYDVEHEHGFLHLRFGEHYEWLRDESIDPARLAFYQLHHYLSLTAGGLKLQQRGFHDQALARGIMESNLRRALQFVG
>NZ_CP048209.1|WP_162360524.1|3864214_3866392_-|YhgE/Pip-domain-containing-protein
MKLFHVFAGEFRTFIRTPMLLVTFAAVALVPILYSGFLIRGTWDPYGQLASLPIAVVNEDRGAEFEGKTRNVGTEFVDELKSNEQFAWHFVTPDEALNGMKGNRYYGTITIPASFSADAASLESDHPKQAEIRFEANSFNNFIAGQIGENAIKELRNRLSATLTEAYSRAIFAQFETIATGFSDAGKGAGELHAGAQTLGDGIHTLKANLDALANGTGRMAGSVGQLRTGAGSLRDGAAALKQGAGDLANGAKAIQDAVGKLDQGASSAVSGSRTLADGLKAFKTGADRLSDGLKTAADGSRSLQTGLAASSASSADLASGASEVAVGLEQFAAAHSDLAEDAAFQKLLAASKSVAQGSKTLSEGQRQLLAGSQTLAAGNGTLASGAQSLSGSAQQLAGGAEQLRTGQLWLQSGLHALSGQLPAFADGARKAGDGAAKLNGGAAALASGIGELASGIDQAASGAKKLDDGAAELDAGVPKLADGSGKLADQLNAAAAKTAAVKADDASVRMLADPVAIVSNDDRKVSVYGSGIAPYFISMSLFAGALVFTTIYAARGTRVADATGPRLLVGKLIVFGLMSIVQSLVVCTVLLTMLGLHVQSVPLFYLFTAATGLTFMLLVQMLVTWLDQPGRFIVLVVMIFQLASSAGTFPLELLPGWAKSMHPWLPMSYSIQGLRDVISSGDFSRAWSQMGMLAIFASGSLMLTCVYFMTRETDDDEQLMPAKV
>NZ_CP048209.1|WP_162357927.1|3863592_3864066_-|MarR-family-transcriptional-regulator
MNKHEQVMMDLRDVFNKMAWLNKIKMEVSLKGFKPSEVHCIEHIGRHADSNVTKLAESFYMTRSAISKMTKKLMDKGLIESYQKAENKKEIYFRLTEQGQAVDKIHEELHREFQARDKAVFETVTEEQYDGMLRFLGKYSKHLDAEIMKSGADAKSE
>NZ_CP048209.1|WP_162357926.1|3861988_3863410_-|multidrug-efflux-MFS-transporter
MKPNPMKAPGLPRDVLIAAWAIALGAIAPMLDSTMVNIAVDKLTKQFHTTLDIIQWAITGYVLALAIAVPVSGWLMNKYNGKRIFIGAVVAFGAISVLAGLSWSSGSFISFRLIQGFSAGVITTLMSTLLVKTAGPENLGRVMAIVSTPMIFGPILGPVIGGFIVQGASWRWIFFINVFIVLIAAPLMMKKLPDFEPFKKDSKLDVFGIAVLSCMSAALIYGITKAADHATFYNRAAVLWVGVGLALAVIYLAYNRIRNNQTVLPLNLFAHKRFSAASVGLFLANISIMGPMLIFPLFFQHFRHYTAIEAALALIPQGVGMLVTRPLIGKMIDRLGAKYVVMVSLAISLIGSVPLIFITDHTSMVWIAVVLFIRGTSFGGIILPLTSDAYTGLDSRELPEAGVGINMIENLGSSFGSAIVATVISAVSQGLQPTIANELKGYHAAFLVSVIVLAAIFIPGLFLTHKKRMPSRH
>NZ_CP048209.1|WP_162357925.1|3861251_3861884_-|phosphoribulokinase
MNKVIEEVVNRLSGRNGRTIIGISGHGASGKTTLTRQLVELLGPDHVNVINTDTYLIGSALRKYTLISYDYRNERHQDKMTACHPAAHNSLALERDLRMIRDGMDLYTIRTEFAEQQLISPHNGITIVEGMTVAFTNLDLYDSTIYLYTDGETELTRRSDRDVNERGRDIEALRQSHDERRIQYELFMHPRCHQFDIIIRSSNEGCVLEK
>NZ_CP048209.1|WP_162357934.1|3872821_3873964_-|glycerate-kinase
MKVVLAPDSFKESMSAYRAAAVMREAIQGVAGGSETEIVELPVADGGEGTLDVLIGAMRGRLIDVEVTDPLGGKAAAHYGLSGDGGTAVVEMAQASGLQLVPPEARNPLLTTTYGTGELIGHALSHGTVRRMIITIGGSATNDCGAGMLQALGARLLDAGGREIGRGGGELPCVAAIDLSGLDKRLREVRIAVACDVTNPLVGPRGASQVFGPQKGASPQMAMALDAALSHFADRIAEASGLRLHDVPGAGAAGGLGAALMLCGGKLEPGIELVLDAVDFDAHLEGADYVLTGEGRIDGQTPNGKVIAGIVKRARKAGVPVLAFAGSLQPGYESLYEAGLQAAFGITTRPMPLEDALKQGEQSLHQAVANVMRLVAGTKR
>NZ_CP048209.1|WP_162357935.1|3874296_3875283_-|peptide-methionine-(S)-S-oxide-reductase-MsrA
MSDINTDQAQQSGSKLEKATFAGGCFWCMVTPFEEQPGIHSVVSGYMGGHTANPTYKEVCSDTTGHAEVVQITFDPAIYPYEKLLNTYWQQIDPTDAGGQFHDRGHSYRSAIFYEDEAQRAAAEKSKAELERSGRFDKPIVTEIVPSAAFYPAEDYHQDYHHKNPLRYRMYRKGSGRDAFIDAHWNTTQDREARRAMLTAEQFEVTQNNATEPPFANEYWDFNGEGIYVDIVSGEPLFSSKDKFDAHCGWPSFTKPLVNANVKEKGDYSHGMIRTEVRSREGDSHLGHVFNDGPGPSRLRYCINSAALRFIPKADMEAEGYGYFLPFV
>NZ_CP048209.1|WP_162357936.1|3875544_3876030_+|C40-family-peptidase
MSFSYKTLLKSILNVSLCSTIGVAAIAAGTATTASAATEKSKELITYGEKYIGTPYLYGAVPYMTNAFDCSSFTQYVFDNFNITLPRTSFDQALKGTKVAKGYLSMGDLVFFKTNGYSISHVAIYAGDNKILHSANNGVEISDMDSSYWKKYYVTARRVLN
>NZ_CP048209.1|WP_162357937.1|3876283_3876847_-|NUDIX-hydrolase
MGINYCMTCGAPLALRDIDGTMRMACSAEGCSFVHWGNYSIGVGALVLRDDKVLLVRRAQEPGKGYWTNPGGYIEQLELIHDSIVREVKEETAVDAEVRGIVAVRDLPRNIHNVYIAFAMDYVGGEPEPDGIEVDRAGFFSMEELESMNVAGFTRWLIDVALRSKNEGLTEDKEPLVQLDGHGLFRV
>NZ_CP048209.1|WP_162357938.1|3876975_3878379_-|hypothetical-protein
MKKWTVVLLVLAMFAFGGSSVFAHGGYSGKDGKNNQQQSCSQTVNMLNQVLQKTKNERSRSLLVSLIASFKAQCAADNGSSLNTQKVTEDKNALAIQYLVNDNANNVTLPVILPARGKNGSTVKWTSSNPLVISNDGLTVHRQAKADVAVNLTAVLTYNNATATKTFRVVVKGTSPQLSDIERVTRDKAALAIGFGESDNGGSVTQPFKSLPAKGENGSTVKWTSMTPSVISNDGKVVNRPAAGSGDVTVVFAAYLQYGSATEFKLFTVTVKQQLPDTQKVAADKAALAIDFGGSDNAGRVTRPLDGLPATGVNGSKITWISSAPGTLSADGKTLNRPPSNASDTIVYMTAILYSGSSSDTKMFALTVKRQYSDSEQAAADKADLAIAYRSGDSASGVTQPLGLPTKGYYGSTITWYSSNTSVLSNDGKTLHRPAHGKGNTNVTLTAIISNGGSADVRAFTVTVKQQ
>NZ_CP048209.1|WP_162357939.1|3878646_3879306_-|spore-cortex-lytic-enzyme
MNRQTRIIALLAGAIVAGSSLLGYGGTAMAASPPTLKAGSAGSDVADLQFRLQTLYYFKGTITTTYGMTTRSAVIAFQKAHGLQTDGIAGPATWSTLKKLTVNKPELSKLARIIYSEARGEVYKGQVAVGAVVMNRLKSPLFPKTVTDVIFAPFAFAAVADGQYWLLPDNTAFLAAKDAVRGWDPTKNALYYYNPATAKSQWMLARKVTTKIGNHVFAV
>NZ_CP048209.1|WP_162357940.1|3879432_3880119_-|hypothetical-protein
MNMAVKGIVKMHLRDRISWFLVPWCIMMSSFLINLIIAGTMNDDQIITGGLASIYIYSMVSGIVAVNHTFPFALGLSVRRRDYFTGTMMMILAVSIVTSIVLTLLSYIEDASNGWGVRLFFFHLPYVTDGNAFQQFIVFFSFLLFMYLFGFVISSLFRRFGRTGLLVAAIVSLIIGTVLVFAIIHLEWWRDIFDFFDGRSAFNIALLLLPVTIVCSLVSYALFRRSTI
>NZ_CP048209.1|WP_162357941.1|3880118_3881012_-|ABC-transporter-ATP-binding-protein
METIVEINRLTKSYGSFTAVDHVSFAIEPNKIYGLLGRNGAGKTTIMHMITAQLFPTGGELRVFGEAPYENDRVLRQICFIKESQKYPDTFRVNDVLYTAEALYPNWDREFAKRLVADFNLPLKRRMKKLSRGMLSSVGIIIGLASRAPLTIFDEPYLGLDAVARNIFYERLMEDYTEHPRTVILSTHLIDEVSKLLEHVIVINKGRILLDEEADSLRGRAYTVSGPAAKIDSYAAGKTVIHQESLAGSRAVTIFERLGVSDQKRAEALGLQFTSVTIQQLIVFLTNGASAKKEGTA
>NZ_CP048209.1|WP_162357942.1|3881015_3881381_-|GntR-family-transcriptional-regulator
MGNTIDDSRPIFVQIAERIEDDIIAGGLPEESQVPSTNQFAAFYGINPATAAKGVNLLVDQEILYKKRGIGMFVSSGAKEKLMEKRKEQFFEQYVVTMIREAEKLGITREQLTDMIRGKGN
>NZ_CP048209.1|WP_162357943.1|3881649_3882417_+|endonuclease/exonuclease/phosphatase-family-protein
MKLNVLTFNLRVHVLGDGDNAWPNRVTGAADAIRQSDADIVCTQEGTAAMLRDLQKQLPDYRWIGASRSGETEDEYCAIFYKHATIAPAESGNFSLSEQPEQLGAMSWNTACPRMCTWGRFVGKDGAAWLVYNTHLDHMSEEARDNGIQLVLDRMKANAEQGSVPLVLAGDFNSEPDSNAVKLVGQAGYHSAYDVIAEPHGRTYHDFEGGESGNPIDYLFVSPNARIASARVDREQYNGRYPSDHYPLQAIVVKE

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Crispr_ID: NZ_CP048209_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_14

4504704-4504782

Orphan

Consensus_repeat	Method
TTGTACACACAAACCAATCCGCTGACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_14

>merge|NZ_CP048209|14|4504704-4504782|CRISPRCasFinder
TTGTACACACAAACCAATCCGCTGACGGAATGCTGTATGTCCAATCTCGCGATTGTACACACAAACCAATCCGCTGACG

>NZ_CP048209|14|12|4504704-4504782|CRISPRCasFinder
TTGTACACACAAACCAATCCGCTGACG	GAATGCTGTATGTCCAATCTCGCGA
TTGTACACACAAACCAATCCGCTGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162358455.1\|4506372_4506918_-\|photosystem-reaction-center-subunit-H	unknown	unknown	gnl\|CDD\|226398
NZ_CP048209.1\|WP_162358456.1\|4506934_4508089_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP048209.1\|WP_162360573.1\|4504894_4505965_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP048209.1\|WP_162358457.1\|4508102_4508522_-\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP048209.1\|WP_162358458.1\|4508762_4509860_+\|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl\|CDD\|234664
NZ_CP048209.1\|WP_162358454.1\|4501805_4504442_-\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_CP048209.1\|WP_162360570.1\|4499121_4500201_-\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NZ_CP048209.1\|WP_162360574.1\|4511578_4512883_-\|replication-associated-recombination-protein-A	unknown	unknown	gnl\|CDD\|237355
NZ_CP048209.1\|WP_162360568.1\|4494319_4496404_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP048209.1\|WP_162358460.1\|4513019_4514369_-\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|234815
NZ_CP048209.1\|WP_162360569.1\|4496703_4497954_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP048209.1\|WP_162358461.1\|4514674_4515340_-\|YdeI/OmpD-associated-family-protein	unknown	unknown	gnl\|CDD\|379149
NZ_CP048209.1\|WP_090641631.1\|4506174_4506369_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162358452.1\|4500723_4501035_-\|DUF1292-domain-containing-protein	unknown	unknown	gnl\|CDD\|184235
NZ_CP048209.1\|WP_162360572.1\|4501492_4501756_-\|IreB-family-regulatory-phosphoprotein	unknown	unknown	gnl\|CDD\|180108
NZ_CP048209.1\|WP_162358453.1\|4501043_4501460_-\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|335420
NZ_CP048209.1\|WP_162358459.1\|4509967_4511329_-\|HlyC/CorC-family-transporter	unknown	unknown	gnl\|CDD\|224173
NZ_CP048209.1\|WP_162360571.1\|4500345_4500627_-\|DUF1292-domain-containing-protein	unknown	unknown	gnl\|CDD\|377740
NZ_CP048209.1\|WP_162358451.1\|4498092_4499037_-\|U32-family-peptidase	unknown	unknown	gnl\|CDD\|223896
NZ_CP048209.1\|WP_162358450.1\|4493412_4494096_+\|peptidase	unknown	unknown	gnl\|CDD\|377289

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162358455.1\|4506372_4506918_-\|photosystem-reaction-center-subunit-H	gnl\|CDD\|226398	COG3881, COG3881, PRC-barrel domain containing protein [General function prediction only].	4.49569e-18
NZ_CP048209.1\|WP_162358456.1\|4506934_4508089_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	1.15582e-176
NZ_CP048209.1\|WP_162360573.1\|4504894_4505965_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	1.15987e-61
NZ_CP048209.1\|WP_162358457.1\|4508102_4508522_-\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	2.96771e-49
NZ_CP048209.1\|WP_162358458.1\|4508762_4509860_+\|tRNA-2-thiouridine(34)-synthase-MnmA	gnl\|CDD\|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	0
NZ_CP048209.1\|WP_162358454.1\|4501805_4504442_-\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP048209.1\|WP_162360570.1\|4499121_4500201_-\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	3.95196e-125
NZ_CP048209.1\|WP_162360568.1\|4494319_4496404_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.14472e-47
NZ_CP048209.1\|WP_162358460.1\|4513019_4514369_-\|divalent-metal-cation-transporter	gnl\|CDD\|234815	PRK00701, PRK00701, divalent metal cation transporter MntH.	0
NZ_CP048209.1\|WP_162360569.1\|4496703_4497954_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	1.40354e-140
NZ_CP048209.1\|WP_162358461.1\|4514674_4515340_-\|YdeI/OmpD-associated-family-protein	gnl\|CDD\|379149	pfam13376, OmdA, Bacteriocin-protection, YdeI or OmpD-Associated. This is a family of archaeal and bacterial proteins predicted to be periplasmic. YdeI is important for resistance to polymyxin B in broth and for bacterial survival in mice upon oral, but not intraperitoneal inoculation, suggesting a role for YdeI in the gastrointestinal tract of mice. Production of the ydeI gene is regulated by the Rcs (regulator of capsule synthesis) phospho-relay system pathway independently of RcsA, and additionally transcription of the protein is regulated by the stationary-phase sigma factor, RpoS (sigma-S). YdeI confers protection against cationic AMPs (Antimicrobial peptides) or bacteriocins in conjunction with the general porin Omp, thus justifying its name of OmdA, for OmpD-Associated protein.	3.05038e-20
NZ_CP048209.1\|WP_162360574.1\|4511578_4512883_-\|replication-associated-recombination-protein-A	gnl\|CDD\|237355	PRK13342, PRK13342, recombination factor protein RarA; Reviewed.	0
NZ_CP048209.1\|WP_162358452.1\|4500723_4501035_-\|DUF1292-domain-containing-protein	gnl\|CDD\|184235	PRK13678, PRK13678, hypothetical protein; Provisional.	2.49255e-12
NZ_CP048209.1\|WP_162360572.1\|4501492_4501756_-\|IreB-family-regulatory-phosphoprotein	gnl\|CDD\|180108	PRK05473, IreB-like, IreB family regulatory phosphoprotein. IreB (EF1202) was characterized in Enterococcus faecalis as a small protein, well-conserved in the Firmicutes. It belongs to a system that includes the Ser/Thr protein kinase IreK, and phosphatase IreP, undergoes phosphorylation on threonine residues, and is involved in regulating cephalosporin resistance. This family was previously named DUF965 by Pfam model pfam06135.	7.40155e-53
NZ_CP048209.1\|WP_162358453.1\|4501043_4501460_-\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|335420	pfam03652, RuvX, Holliday junction resolvase. This family of nucleases resolves the Holliday junction intermediates in genetic recombination.	3.62091e-63
NZ_CP048209.1\|WP_162358459.1\|4509967_4511329_-\|HlyC/CorC-family-transporter	gnl\|CDD\|224173	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only].	2.14967e-150
NZ_CP048209.1\|WP_162360571.1\|4500345_4500627_-\|DUF1292-domain-containing-protein	gnl\|CDD\|377740	pfam06949, DUF1292, Protein of unknown function (DUF1292). This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.	4.09306e-07
NZ_CP048209.1\|WP_162358451.1\|4498092_4499037_-\|U32-family-peptidase	gnl\|CDD\|223896	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones].	2.23724e-88
NZ_CP048209.1\|WP_162358450.1\|4493412_4494096_+\|peptidase	gnl\|CDD\|377289	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142), of the characteristic HEXXH motif.	1.18213e-117

>NZ_CP048209.1|WP_162358454.1|4501805_4504442_-|alanine--tRNA-ligase
MKASEIRSKWLAFFESKGHKIEPSASLVPHNDPSLLWINAGMAPLKPYFDGRVIPDNPRIANSQKCIRTNDIENVGKTRRHHTMFEMLGNFSIGDYFKEEVITWAWEFLTSPQWIGFDPERLSVTVYPEDEEAFRYWNEKIGLPAERIYKLEENFWDIGEGPCGPCTEIFYDRGDAFGDLNDPECWPGGENERFLEVWNLVFSQYNHNKDGSYTPLPNKNIDTGAGLERFTSILQNVDSNFDTDLFRPIIDRTCEVAGVTYHTNPEHDIALKVIADHVRTVAFAIGDGVMPSNEGRGYVIRRLLRRAVRYGKSLGVDRPFLFELVAIVGEIMGAYYSEIVEKREFIEKVMRTEEERFHETLSDGLSLLGELVKTAKADGGARISGPDAFKLYDTYGFPFDLTEDYAAEHGMTVDREGFDAAMEEQRTRARAARQDTGGMNVQGGPLADFTAKSEFVGYEELAVEGAKVIAIVDGDALVDGAGEGAEVLVILDRTSFYAESGGQVGDSGTISGEGFALSVGNVTKAPHGQPVHHAVVGRGTVKTGDTVQAVVTTQTREDTIKNHTATHLLHRALKDVLGEHVNQAGSLVEPDRLRFDFSHFGSISPEELADIERRVNEQIWLGTTLQIDYKSLAEAKAMGAMALFGEKYGDVVRVVRVGSYSLELCGGCHVTNTSQIGLFKLVSESGIGSGVRRIEALTGRHAYLYMEGQLDLLKQAAALLKSSLNDVPKRIEGLNAQAKELTRDNESLQSKLSRIEAGSLESQTKTVGGVTLLAAQVSAPSMDALRGIADELKTKLTSSVIVLGAVAEDKVNLVAAVSPDLVKQGFHAGKIVKEAAAACGGGGGGRPDMAQAGGKDPSKLAQALQIAEELVLAQSNVI
>NZ_CP048209.1|WP_162360572.1|4501492_4501756_-|IreB-family-regulatory-phosphoprotein
MNSMDKTMKFDVKAEGEASSKEIMLSVYDALLEKDYNPINQIVGYLLSGDPAYIPRHNNARSLIRRKERDELIEELVRSYLSQHSKS
>NZ_CP048209.1|WP_162358453.1|4501043_4501460_-|Holliday-junction-resolvase-RuvX
MRLMGLDYGDRRIGVAVSDAFGWTAQGVGVVAKRRDNSEDEDIAKLMQEHEVSEIVVGLPKNMNGTIGPRGEICIAFAQHLQQKLNVPVHLWDERLTTVAAERTLIEADVSRKKRKLVVDKMAATLILQNYLDSKTKR
>NZ_CP048209.1|WP_162358452.1|4500723_4501035_-|DUF1292-domain-containing-protein
MANDNMQNEEPEIIYIPDEEGNEEEFEVVMKFEVDGSDQKYMMVVPLNVDAEDEQDEEADEVYAFRYEEDGDDLKLYTIEDEEEWNMVEETFNTLLAEIDDND
>NZ_CP048209.1|WP_162360571.1|4500345_4500627_-|DUF1292-domain-containing-protein
MSVLSPIYGTEVDLIGDAGETEPFQIVAEFQLGDRAYAGLQSQSMQKEDEIAFFRIVMNDGSEPELESIEDDEEWEDVAEAYDDLMFEGDDQP
>NZ_CP048209.1|WP_162360570.1|4499121_4500201_-|endolytic-transglycosylase-MltG
MRPVGPSKARITFWVITSLLSLMILIVGGTYLYIWNGLRPTSSGDTVQVELKKGSSPLAFAEVLEDHGIIRNAFLFKYYLRYKNEGPRFQAGVYELHPGMNKQEIIDKLNAGEILPAETIRFTIPEGFTVEQIADKLAEAGYDDKAGFIAAADKDQAWPDADAAKNVPKDGKLRHRLEGYMFPETYELPKDSKPEAIIDRMLQETDRKLDSLPENWDDALAENGVNFHQMLTIASLVEREVVVDEERPIVAGIIYNRLKKGMPLQIDATVQYLLDKQKEHLMEADLQVDSPYNTYKIKGLPPGPIASPSLKSIEAALFPAKTDYYYYVTKKDGSQKHLFAETLKQHNQNIAKSNQMATP
>NZ_CP048209.1|WP_162358451.1|4498092_4499037_-|U32-family-peptidase
MATKPELLIDAASLADMERLIEAGADAFVIGEARYGMRLPGDFDIAGIAAAVKLAHAHRVSVYAAVNNMMDNATVDTLPEYLRALADAGVDAVVFGDPAVLMAAREAAPDMKLHWNAEMTSTNYATANYWGRRGASRVVLARELNMDQIIGVKQNTPLAVQVQVHGMTNIYHSKRPLVHNYFVHQNKDGAEENVPVHGKREDGLYLVEAERPGERFPIYEDANGTHIMSSDDLCMLENLHELMEVNIDSFRIEGLLKSITYNETVVRAYRAAIDAYMADPEGYAFNEAWLESIQALQDPGRELSYGFFYKEQVY
>NZ_CP048209.1|WP_162360569.1|4496703_4497954_-|U32-family-peptidase
MTTQSAPRLKGKRNRLDKPELLAPAGNLEKLKFAVHYGADAVYIGGQKYGLRSNADNFSFEEMKEGVEFAARYGAKVFVATNIYAHNEDIDGLETYLQELERAGIAAIIAADPIIIETAQRVAPKLEVHLSTQQSTLNWQAVKFWKDEGLPRVVLAREASLEEIAEIKAHVDIEIEAFIHGAMCSSFSGRCVLSNHFTDRDSNRGGCCQSCRWKYDIYEDDLQMVGMDADQFTMGSKDLCMLEHIPDLIEVGVDSFKIEGRMKSLHYVATVVNAYRQAIDSYMADPEHYELKQVWLDDIRKAANRPLNTGFFYDTPGAEDHIYQPEDKAAPYDFAGVVLSYDEAAGTAVIQQRNHFKPGQEIEFFGPHGTFFKQTVGDLADTDGNALDAARHPLQHIVMRVNAPVKPMDMMRKRIR
>NZ_CP048209.1|WP_162360568.1|4494319_4496404_-|methyl-accepting-chemotaxis-protein
MKSIYESSVKGIRNVKLTNPIKSVGLMLFLIIFCAILICVLGVGLFSYSTSKSIIKDKVAESSSVALAQSNGKLELMFKNYEALSMQILLDKNVQDMLIAYHKATDDYDKFDLMKKLSDTIQSYILGNQTIVGAAILPINGKSNAVTIGSTNITSEDASKADWFQSVVDGQGRLVWLPSKAKGYSDKGTEPTFAMGRVMKNTVNNEGNFIMLVEIKLHEIGNQLDDLKLGEGSEALILDAKNNVIYSSDEAQLGQPSPIAISEEQLKKSAGSMTTSDSDGDEVLAMYNKFETTGWNMLGTVPVKELVKDAKQIRNATYIMAGIAALLAIGIGLLVIRMVAIPLVRLRNLMNEGERGNLTVRSTLNKKDEIGQLAQSFNQMMAQITVLVTQTNQSAQDVLVTAGELSDASKKTAISAKEIAVATEEIANGATSLAVEAEKGSDLTSEIGQQMQQVTSANQEMGVAASEMEKASQQGTVYMGTLIEKTGLTEEMTRSMVEKVDKLKESTGSIRKILDVLNNITKQTNILSLNATIEAARAGTAGKGFMVVADEIRKLADQSRQSIDVVGQITEAIQKEIDETVNVLSNAYPIFQEQIQSVKEANQIFLTVQGQMGEFVGRLGSVTTSIGTLERSQVVLSEAMGNVSAVAEESSATSQEVASLSNEQTNISEGLVRLSDKLETVSTGLKETLSRFRT
>NZ_CP048209.1|WP_162358450.1|4493412_4494096_+|peptidase
MFFHPMDFLIIIAFALSVWAQFRVKGTFNRWSGVPTASGITGYQAARMMLDRNGLHDIPVEPVPGTLSDHYDPIHRVVRLSEHVYYENSISAVSVACHEVGHAIQHKVHYPMLALRHRIFPVVNFASGAAPFLLIAGFLFNLSGLVGLGIIFFSCAVAFQLVTLPVEFNASSRARDLMVAEGFITNDEERGVAKVLNAAALTYVAAALISLLELIKYILIFTQQQRD
>NZ_CP048209.1|WP_162360573.1|4504894_4505965_-|AI-2E-family-transporter
MERFTNNRIFRWLVYLILGLVALYLLLLLKPIFIHIYVFLRAVLAPFLIAMIISYVLNPIVSLLNERRVPRTMAVLLIYAVFCAALTVILMNAIPMFMEQLQELNRHMPDLSMKAQNIVDDLNNSSFLPESIRSGINKSLYKLEKQGSDAIFSFINNIGEMLNVVFIAFIIPFLAFYILKDFEVFERTLLTYVPKPHRKHAVRLLKDIDNALGSYIRGQFLVCVIVGTLAYIGYLIIGMPYALLLASVVAVTNIIPYLGPFFGAAPALVMASTVSIKMMLMVVIVNTLCQILEGNIISPQVVGRTLHMHPLSIIFALLVGGELAGIVGMILAVPIFAALKVIVQHIFAYYVRRKTI
>NZ_CP048209.1|WP_090641631.1|4506174_4506369_-|hypothetical-protein
MKCPNCSSKDIGKIGSHQYYCWGCFIELTVNGEKMSVYQVEEDGTLSSLDDLFFEDEMPQVHAN
>NZ_CP048209.1|WP_162358455.1|4506372_4506918_-|photosystem-reaction-center-subunit-H
MLRLQHLIGLPVIEMNAGKHVGYVKDAWFDEHWQLGGIILDAGRRFLTSMKAVVWSEVLVCGEDSVLIMNEASVQRTKQTEIQRSFLTGTVRLKDLPVVTAHGEQLGRVSDVYFGEIQGTQIIGYELTDGFIADIMEGRKWLPAPPQADEVMLGNDVIIVPAGSEEFLSPVVVSETDIREK
>NZ_CP048209.1|WP_162358456.1|4506934_4508089_-|cysteine-desulfurase
MERIYYDHAASSPMHPDAAAAMMDVYAGIVGNPSSIHGNGRAARQLLNRARDLIAGGIGCAPAELVFTSGGTESDNEALIGAARAARKRGKSHIITAATEHHAVLHACESLEREGFRLTVLPVNEQGIVALPDVAEAIADDTALISVMYVNNETGTIQPIAAIGELARSSGVVCHVDAVQALGKLPIDLRTLPVDLMSFSAHKINGPQGVGALFVRKGVAIEPLLHGGSQERKRRPGTENIAGIAGFAAAFERCVNEMAERKLLLDKLRYTWIERMKAIAGADRVVVNGHDEAYAPHIVNLSFLGISTETMLMNLDIAGIAASGGSACTAGALEPSHVLRAMGVSQERQASAVRFSFGLRNTTEELEAAAKKIETFMGRIRTTA
>NZ_CP048209.1|WP_162358457.1|4508102_4508522_-|Rrf2-family-transcriptional-regulator
MKISTKGRYGLTIMMELAAKFGEGPTSLKSIAERNQLSEHYLEQLIAPLRNAGLVKSIRGAYGGYILSKEPQNITSGDVIRILEGPISPVDFTEEDDPAKRNLWLRIRNSIADVLDSTTLADLVAYKEEVQQDSYMFYI
>NZ_CP048209.1|WP_162358458.1|4508762_4509860_+|tRNA-2-thiouridine(34)-synthase-MnmA
MSNSNIRVVVGMSGGVDSSVTALLLKQQGYDVIGIFMKNWDDTDELGHCTAEEDAEDVRRVCDQIGIPYYTVNFEKAYHDKVFAYFLDEYRNGRTPNPDVMCNREIKFGDFLQKALELGADYLATGHYARLERTADGESKLLRGVDSGKDQTYFLHALRQDQLAKAMFPIGHLPKPEVRRIAEEFGLATAKKKDSTGVCFIGERNFKQFLSGYLPAQPGPMIDIMTGETKGRHDGLMYYTLGQRQGLGIGGSGSGEPWFVADKDLKENILYVVQGDAHPSLYSAGLTATGINWISPAKPNGEFVCTAKFRYRQPDQQVKVTFRPDGSTADVVFAERQKAITPGQAVVFYDGDVCLGGGTIDIVKK
>NZ_CP048209.1|WP_162358459.1|4509967_4511329_-|HlyC/CorC-family-transporter
MSSDPLPIAWSIVLILVLVFLNGFFVAAEFAMVKVRSSRIDTLVQDGNRKARFASLLTSNLDAYLSACQLGITLASLGLGWVGEPTVSHILEPLLEKLRLGEVAVSTISFIVAFSVITVFHIVLGELAPKTYAIRKAEPVTLWTAVPLIAFHKVMYPFIYLLNGMANGMLKSIGIEPAAEHESAHTEEEIRILMKESHKSGLIDNTELTLVDNIFEFAETHAREIMIPRTEMICLYANLPFEENQAIALKEMHTRYPLCEKDKDNIIGFIHIKDLLKVSRQHIEDIREIARPMTTVPDSMHISTLLKLMQKKKTQIAILIDEYGGTSGLVTLEDIMEEIVGEIQDEFDEERPDVEPKEDGSHSVNGMMLIEAVNSCFGTEIESDDYDTIGGWMYAQLENPPTQGQRVVHPIGFEFIIEETDHLRISRIQIRKHAVNDADEELLIEDNLQAETG
>NZ_CP048209.1|WP_162360574.1|4511578_4512883_-|replication-associated-recombination-protein-A
MDLFTYNEEEAQPRAKLLADRMRPQTIDEYIGQRDVVGPGKLLRRAIEGDQVSSILLYGPPGCGKTTLAHIISKRTQGDFVKLNAVDATVKDVRAVIDQAKITKSMYGRKTILFLDEVHRFNASRQDALLPAVEQGIIVFIGATTENPFHYVNGALLSRSTLFQLEALTREDALEAMRRALADPERGLGFMKLRVAEEALQHIASMAGGDIRRALNALELAAVTTPSQPDGTVDVTLEVAEESIRKPTVRADESTQYDVLSAFHKSVRGSSDAALFWFLYAVEKLGMDPMTFLRRLIVACSEDIGLANPQAMVQAVTAMDAYHKIGWPEAKYNIAQAILFAVESPKSNAAAVAIGNVMSTIESIGSADVPLHLRDTHYSGAERLGHVGYQYPHDYPNHYVKQDYLPERIANKKFYKATQQGMEDKIRQNQERRK
>NZ_CP048209.1|WP_162358460.1|4513019_4514369_-|divalent-metal-cation-transporter
MSSNQSAPLVQENGWRKDKSANTLPEVYRSMKIPKHGSWFRKFLAFAGPGYLVAVGYMDPGNWATDLAGGSKFGYSLLFVILLSNLMAILLQALAGKLGIVTGRDLAQACRDHYSKPVSMALWVLCELAIAACDLAEVIGSAIALNLLFGIPLIAGVLLTVVDVLLVLLLQNKGFRFIETLVIVLIVTIGGCFLIEMFWSRPEVGAVMQGFIPTGDIVSDPTMLYIAIGILGATVMPHNLYLHSSIVQTRQYEQTELGKRQAIKYATWDSSIALFFALFINAAILIIAASTFHTTGHTEVAEIEDAYHLLSPMLGTAAASVLFGVALLASGQNSTLTGTLAGQIVMEGFLNIRLKPWLRRLITRMIAVVPAVIVTWIYGAKGTGELLILSQVILSLQLSFAVIPLVKFTSDKKKMGNFANPLWLKILAWVVAVVIAALNIYLLVQTFTG
>NZ_CP048209.1|WP_162358461.1|4514674_4515340_-|YdeI/OmpD-associated-family-protein
MNVELMNKLRLSLDMRTALLETPDDSYKESLGAENAEPFSEMDAGTYDFVMLFAKDIASLTEHAPKALKAVKKDGLLWICYPKGTSKIKTDINRDRGWKVVKEAGWEGVSLVSVDDAWSAMRFRPAGMVQAGARASRAADASRTAGVSMVKEIVVPDDVQAALASVPEAAAFFAELAPSHRKEYLRWINEAKQEVTRAKRIGEMKEKLRQQLKRPSDKPQA

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Crispr_ID: NZ_CP048209_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_15

4628238-4628374

Orphan

Consensus_repeat	Method
GCCCCTGAATTCCTGCTCTCAAAGCAGCTTTTT	PILER-CR
AATTCCTGCTCTCAAAGCAGCTTTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP048209_15

>merge|NZ_CP048209|15|4628238-4628374|PILER-CR,CRISPRCasFinder
GCCCCTGAATTCCTGCTCTCAAAGCAGCTTTTTGGCGGCGTATGGTCGTTTCACACTCAAATTCCTGCTCTCAAAGCAGCTTTTTCCTCATATCTGAACGTTTCGCCTCTGAATTCTTGCTCTCAAAGCAGCTTTTC

>NZ_CP048209|15|2|4628238-4628374|PILER-CR
GCCCCTGAATTCCTGCTCTCAAAGCAGCTTTTT	GGCGGCGTATGGTCGTTTCACACTCA
AATTCCTGCTCTCAAAGCAGCTTTTTCCTCATA	TCTGAACGTTTCGCCTCTG
AATTCTTGCTCTCAAAGCAGCTTTTC

>NZ_CP048209|15|13|4628245-4628373|CRISPRCasFinder
AATTCCTGCTCTCAAAGCAGCTTTT	TGGCGGCGTATGGTCGTTTCACACTCA
AATTCCTGCTCTCAAAGCAGCTTTT	TCCTCATATCTGAACGTTTCGCCTCTG
AATTCTTGCTCTCAAAGCAGCTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162358552.1\|4633829_4634132_-\|iron-sulfur-cluster-assembly-accessory-protein	unknown	unknown	gnl\|CDD\|223393
NZ_CP048209.1\|WP_162358551.1\|4633579_4633804_-\|DUF1450-domain-containing-protein	unknown	unknown	gnl\|CDD\|377806
NZ_CP048209.1\|WP_162358539.1\|4616088_4616454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360583.1\|4634599_4635820_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|349448
NZ_CP048209.1\|WP_162358540.1\|4616642_4618487_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP048209.1\|WP_162358542.1\|4620337_4621393_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227688
NZ_CP048209.1\|WP_162360582.1\|4618780_4619425_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	unknown	unknown	gnl\|CDD\|184835
NZ_CP048209.1\|WP_162358547.1\|4626724_4627942_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340949
NZ_CP048209.1\|WP_162358548.1\|4628984_4629626_-\|O-methyltransferase	unknown	unknown	gnl\|CDD\|226607
NZ_CP048209.1\|WP_162358556.1\|4638670_4639573_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162358555.1\|4637196_4638495_-\|alpha-glucosidase/alpha-galactosidase	unknown	unknown	gnl\|CDD\|185035
NZ_CP048209.1\|WP_162358545.1\|4624514_4625456_-\|ferrochelatase	unknown	unknown	gnl\|CDD\|183526
NZ_CP048209.1\|WP_162358550.1\|4631149_4633363_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP048209.1\|WP_162358554.1\|4636046_4636856_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP048209.1\|WP_162358546.1\|4625448_4626525_-\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|234644
NZ_CP048209.1\|WP_162358543.1\|4621677_4622217_+\|phosphatidylglycerophosphatase-A	unknown	unknown	gnl\|CDD\|224186
NZ_CP048209.1\|WP_162358553.1\|4634240_4634480_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162358544.1\|4622935_4624402_-\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_CP048209.1\|WP_162358541.1\|4619415_4620162_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NZ_CP048209.1\|WP_162358549.1\|4629756_4630902_+\|class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223194

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162358552.1\|4633829_4634132_-\|iron-sulfur-cluster-assembly-accessory-protein	gnl\|CDD\|223393	COG0316, sufA, Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones].	6.35381e-11
NZ_CP048209.1\|WP_162358551.1\|4633579_4633804_-\|DUF1450-domain-containing-protein	gnl\|CDD\|377806	pfam07293, DUF1450, Protein of unknown function (DUF1450). This family consists of several hypothetical bacterial proteins of around 80 residues in length. Members of this family contain four highly conserved cysteine residues. The function of this family is unknown.	6.29841e-07
NZ_CP048209.1\|WP_162360583.1\|4634599_4635820_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|349448	cd06229, M14_Endopeptidase_I, Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I. Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs), and is classified as belonging to subfamily C. However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1 has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide. ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.	1.25158e-110
NZ_CP048209.1\|WP_162358540.1\|4616642_4618487_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	7.044e-159
NZ_CP048209.1\|WP_162358542.1\|4620337_4621393_-\|hypothetical-protein	gnl\|CDD\|227688	COG5401, COG5401, Spore germination protein [General function prediction only].	8.38284e-20
NZ_CP048209.1\|WP_162360582.1\|4618780_4619425_-\|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase	gnl\|CDD\|184835	PRK14822, PRK14822, XTP/dITP diphosphatase.	1.47402e-88
NZ_CP048209.1\|WP_162358547.1\|4626724_4627942_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.57114e-124
NZ_CP048209.1\|WP_162358548.1\|4628984_4629626_-\|O-methyltransferase	gnl\|CDD\|226607	COG4122, COG4122, Predicted O-methyltransferase [General function prediction only].	1.01349e-50
NZ_CP048209.1\|WP_162358556.1\|4638670_4639573_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	4.67271e-33
NZ_CP048209.1\|WP_162358555.1\|4637196_4638495_-\|alpha-glucosidase/alpha-galactosidase	gnl\|CDD\|185035	PRK15076, PRK15076, alpha-galactosidase; Provisional.	0
NZ_CP048209.1\|WP_162358545.1\|4624514_4625456_-\|ferrochelatase	gnl\|CDD\|183526	PRK12435, PRK12435, ferrochelatase; Provisional.	1.49601e-110
NZ_CP048209.1\|WP_162358550.1\|4631149_4633363_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	5.21097e-103
NZ_CP048209.1\|WP_162358554.1\|4636046_4636856_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	5.32251e-128
NZ_CP048209.1\|WP_162358546.1\|4625448_4626525_-\|uroporphyrinogen-decarboxylase	gnl\|CDD\|234644	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated.	2.31099e-172
NZ_CP048209.1\|WP_162358543.1\|4621677_4622217_+\|phosphatidylglycerophosphatase-A	gnl\|CDD\|224186	COG1267, PgpA, Phosphatidylglycerophosphatase A and related proteins [Lipid metabolism].	7.99361e-49
NZ_CP048209.1\|WP_162358544.1\|4622935_4624402_-\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	3.98604e-176
NZ_CP048209.1\|WP_162358541.1\|4619415_4620162_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	1.59354e-164
NZ_CP048209.1\|WP_162358549.1\|4629756_4630902_+\|class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|223194	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].	1.57353e-146

>NZ_CP048209.1|WP_162358547.1|4626724_4627942_+|multidrug-efflux-MFS-transporter
MEQWKKNLAVLWIGQFLVMGGMTMIMPFMSLYLQSPRIGMTNEHEIATWAGIIFAGNFVTSFLFQPLWGKLSDKYGRKMMLLRSGFGMAVVMVLMGFATSPWHLLLLRMVNGTISGFNPAAVSLVSITTPKPKMGFAMGTLQSGGIAGTIMGPFLGGLLADAVGYRPIFYLTGVSLFAASTLAYFVVKETFDRSAAAAKPQLSVIAGFRQLSGVPQLMALFAVTFLLQFAMIGPNPLMPLYVQKLHGTSVNLAFWAGFVSSAAGITNMVAAPLLGRLSDRIGQERVLGISLVGAALLFIPQAFAGTVWQLLLFRLLQGCFLGGLIPSVNALVRRFTPDGMEGRAFSLNTSMLALGNMIGPIVGGLISGWTGIGGVFLISAVLFLVNALWVRQTLVSRQARKPDAV
>NZ_CP048209.1|WP_162358546.1|4625448_4626525_-|uroporphyrinogen-decarboxylase
MSYNDIFIRACRGERVDRLPVWYMRQAGRYDPDYRKIKENYSLLEICKQPELAAEVTMMPVKKLGVDAAILYSDIMNPVASIGIDFDIVANVGPVIANPIRTADDIARLKPIDVEGDLSHVIETIRILDRELNVPLITFAGAPFTIASYLIEGRPSKSYIKTKTMMYSEPKLWFSLMDKLGDMVIAYLRAHMAAGGKAFQIFDSWVGALAPHDFRKYVLPTIERIFSELADLPQPKIYFPGVASGELLPTLGHVQADIIGLDWRIPVAEGRRRLGGKFGVQGNLDPYVLTAPMDVIKEHAKAIIDEGVKEPKYIFNLGHGLFPEAPLDKLRELTEYVHEYSGQAIAALDGKKEEVAHG
>NZ_CP048209.1|WP_162358545.1|4624514_4625456_-|ferrochelatase
MANPRTGVLVMSYGTPESMEGIEEYYTHIRRGHAPTPEQLAELTERYDAVVGGVFPLRENTNRQAEGLQAALDAAAPGRYAVYQGLKHARPYIEDGVAAMAADGVKQAIGIVLAPHFSTMSVGGYMKRAQEKAGELGIALQEVESYHMHPKLIEALVKRVKDAYAELEQKAGSGQPLKALFSAHSLPARIRDIGDPYERQLLETSAAVADGAGVTDWQFTWQSAGRTREPWLGPDILETLKEVAKAGYKGVLSAPIGFVSEHLEVLYDIDIEAQAVAKELGIQLVRIDMLGTDPLYMETLADCVEQASRDVFL
>NZ_CP048209.1|WP_162358544.1|4622935_4624402_-|protoporphyrinogen-oxidase
MRSNGKLDRFVVIGGGISGLSSAFYLTKEAELRGREAHITVVDPSERIGGKINTLRKDGFVIEKGPDSFLARKTPIIDLAYDLGIQDELTGTNPAAKKTYILHRGKLHPMPPGLVLGIPTEIMPFAKTSLLSWGGKLRAMLDFVLPASKAEDDESVGEFLSRRVGTEVMERIAEPLLAGIYAGDLSKLSLQSTFPQFREAERRHGSLIRGTRASKRKGAAAPAAPSRLPEKLRRSMFLTFKNGLTTMLEALTHALSEAGAESRIGREAVAFRQNEAGEGQAPYEVLLNDGEILEADGIIITTPAFNAADLLEPHIPVDALRAINYVSVANVVMAFDKASFGIEFDGSGFVVPRSEGTTITACTWTSSKWLHASPDDKVLLRCYVGRAGDEAVVDLPDAELAEAVRRDIRNVLGITAEPLFTEITRLHRSMPQYPVGHLTATAALRARLRANMPGVWIAGAAFDGVGLPDCIRQGKEAASIAYDAVAKR
>NZ_CP048209.1|WP_162358543.1|4621677_4622217_+|phosphatidylglycerophosphatase-A
MTKSASYQLNSRSIAEATKEWMTKRGVTTPQIAELVMFLQKDYYPGLTPEECEAYVEAVLTKREVQNAILTGIQLDLLAEEGKLLSPLQEMIENDEGLYGCDEVLALSIVNVYGSIGFTNFGYVDKLKPGILKKLNDKHDAACHTFLDDIVGAIAAAASSRIAHRKQAEREGHIGPPLD
>NZ_CP048209.1|WP_162358542.1|4620337_4621393_-|hypothetical-protein
MTHYRLIRRAALAGALALPILTTGCGLFSQPASESIDPPQNSTQNVSADVDNGQVTAVQGDQSQMTLYLRDRNGLLAPITVMSTLGQDEKPAQKALEMLVDGSSFASEIPDGFSAVLPKGTVVKQLDIIADQKQAVVDFSKEFGNYDAADERKIVEAVTYTLTSQPGITNVKLMMDGKELTSMPVDAMPIDEPLTRAVGINLEAADGVDYSTSAPVTIYFSALSPDNEPYYVPVTRLVNRSNNRAKTAIEQLISGPIGDLPLKAVMTPDVVVKNVTKAKDVVTVDLQDDSYQPGSQEPAEMLQAVVLSLTENTGLSKVQIKLNGKSDFVDTNNQSYSEPVTRLEHINAFKS
>NZ_CP048209.1|WP_162358541.1|4619415_4620162_-|ribonuclease-PH
MRLDGRQADELRPVTITLQPNKYAEGSVLIEFGDTKVLCTASIEERVPPFMKGQGKGWINAEYAMLPRATQVRNQRESAKGKLTGRTMEIQRLIGRALRSVVDLQALGERTITLDCDVLQADGGTRTTSITGAFVALALAVDKLNRNHAFAKYPITDYLASVSVGVIGERTLLDLNYEEDSKAKVDMNVVMTGARKFVEVQGTGEEAPFSREEFDALLAIAEEGIASLIAKQRDVLGEMGGRIGTASV
>NZ_CP048209.1|WP_162360582.1|4618780_4619425_-|RdgB/HAM1-family-non-canonical-purine-NTP-pyrophosphatase
MGMMPGGTVVVATKNAGKVREFAHAFGKLGMDVVSMFDYPNLPDVVEDGATFAENSRKKAREVAEALGMPVLADDSGLEVAALGGEPGVYSARYSGEGATDARNNEKLLRELARVTNGGETAAQLADGTKLLSEARFVCALSLYDPASGSFTESEGFVSGSIMDRPRGDGGFGYDPLFWVDSEQKGMAEMTKEEKQAIGHRGRALADLLRKLED
>NZ_CP048209.1|WP_162358540.1|4616642_4618487_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGFTGWIDWTADLTKQSIILENMTATLANRGPDASGTWISPHCALGHRRLSVIDPANGAQPMVRTADDDTYVLVYNGELYNAPELKRELESRGRRFTTTCDTEVLLVAYMEWGPSCVERFNGIFAFALWDSREEHLFIARDRLGVKPFFFSRQLGRFIFGSEPKALLAHPAVKPEVGPEGLAEIFIVGPARTPGVGVYRDLTELLPGQCATVNRAGVHVSHYWKLESRPHAETVDETARTVGALLKDTVERQLVSDVPLCTLLSGGLDSSALTALAVNYYKETGQGTVHTFSVDYVDNDKHFKSHAFQPNADAPWIERMTSHLGTIHHAMVFDTPELVGALHEAMTARDMPGMADVDSSLLLFCREIKKEATVAISGEAADEIFGGYPWFHREDALNAGTFPWSLAAGMRADLLSQDVAAWIRPLEYIGDRYLDAVAEVQHLPGEDENTRKMRQMSYLNITRFMPTLLDRKDRMSMAVGLEVRVPFCDHRLVEYVYNIPWAVKTAGDREKGILRKGLEGVLPHDVLYRKKSPYPKTHNPNYLNAVRTRLLDVLNEGTSPLLPLINVKKIRQLAESEAASSNLPWFGQLMSGPQLFAYLLQVDMWLRDYKVSIR
>NZ_CP048209.1|WP_162358539.1|4616088_4616454_-|hypothetical-protein
MMANEHDAAYDDRKPYYVSVQAGSILEDPTAAAYELAITANEEELNRLQELLEEYSSMDEKQVMDYWTNPFIGAGVDNDRLLNEGTDGLIVDIYRLLYELGTDETKHHVATMGLFREGSLQ
>NZ_CP048209.1|WP_162358548.1|4628984_4629626_-|O-methyltransferase
MSTEQEATERYVDGLLGDDADLARVHAAIEAQGMPQISIAPGYGRLLTMLVRMSGARNVLEIGALGGYSGICLARGLQAGGKLTSLELKEEYAATARNNLEAAGLGDRVEYVIGDAKESLAALEQEGRKFDFFFIDADKDSYPAYLEWAIKLGNPGAVITGDNALLHGRTIDPDKNGPSVQAMREFNQTMVGDERLTGTLLPAYDGLAIAMIK
>NZ_CP048209.1|WP_162358549.1|4629756_4630902_+|class-I-SAM-dependent-RNA-methyltransferase
MNNLQLIATAPMGLEAVVSRELMELGYTDQKVENGRVIFKGGPADICRANLWLRTSDRVLIKMAEYPATTFEELFEGAKAIDWPAWIPADGEFPVEGRSHKSQLSSVPACQSIVKKAVVEKMKTVYGTEWFQEDGARFVIEVWLLNDVAMITLDTTGPGLHKRGYRKLVTEAPLKETMAAAMILLSRWQPERPLYDPFCGSGTIPIEAAMIGWNIAPGIRRSFNSEGWPLVPDELWDRAREEAFDSVKDAIPLQIAGSDIDPAALDVAAAAIKKAGFANDIKLTQMPVSRIKPDGDYGCLVTNPPYGARLGDETDAEKAVRQLGLSMLYLPTWSMFALTQSRTFEDTIGRKADKRRKLFNGRLECTYYQFFGPLPPRKKPD
>NZ_CP048209.1|WP_162358550.1|4631149_4633363_+|LTA-synthase-family-protein
MTLPDLSTKRRRLRAPFSVPGALLRLDLCLFIMLMLFKLALFDRLVHVPYMDMNRDDRMVAVGTLALIAFWTFWLPRRGRMLALILLNLALTALVYCDLLYFRYFQDLITIPVLMQAGQVGELGDSIHTLLSRRDLWFFADWPFLLLLAGSSLFGKRLRGAFRTSTAAFRSRKQTAVRRVAISAVVLAVGFMLVFVPVHRAQTTWAKGLFTGNWWNLSLYNVTGVLGFHGYDLYRYADEHWLRGNAVTPEQTAEAKQWFADRGHTRDELDRTDPLYGRYKGKNVVLIQLEAFQSFVVGQNIGGQEVTPNINRLMKTSLYFDNFYHQTAQGRTSDADLAANASLQPMPTGSVFTRFAQHDYDSMAKVLKMNGYQANAYHAYDGGFWNRNLMYDTLGYDHFYSKTAFNIDEPLGWSLGDKSFFKQAVSMMKTQQEPFYSFLISLSSHHPYTLPAAVQTLDVGAFKGTMFGDYLEAIHYVDAAIGEMVDELKAAGLWDQSIFLFYGDHDNSIADWQPFESFLGRPLSEADRFRILKGVPFLVHLPDDARAGTYHQVGGQLDVTPTVLHLLGIPSGGQTMIGTPLVTEQPLAGKQVVFRSGGYTDGSVLYLPSEDGLEAHSKCYSFADGKPLADSSACQAGAAEARKELQASDLVVEHDQVPAMHANAKAGTVTGTGTGSGTDSASSGASAGIASITAGASIVATAEVDTGMTTGVTSDTTHGMTRGTATHVAASAIAPAR
>NZ_CP048209.1|WP_162358551.1|4633579_4633804_-|DUF1450-domain-containing-protein
MTNDIRICDKCKHIRTKSMLPKLQKLAPDAEIQVACKSYCGPCARYAFIFINGRYITAPTEDEVIEKASKYIKK
>NZ_CP048209.1|WP_162358552.1|4633829_4634132_-|iron-sulfur-cluster-assembly-accessory-protein
MKVKITRSAAKVLREEIDKPENEGKFLRVFVTHSHGDHAHYGMKMDDAGANDEVIETDKDIKVVLEQGVELLDGVRIDYFYVPQEGFMISNPTQGNHGDH
>NZ_CP048209.1|WP_162358553.1|4634240_4634480_-|hypothetical-protein
MRKLWSLRHWRNVFVRIFRLLTAKEVRLLDKLLYVVPVLLYWVLPDVMPFVPIDDIAVTMIAAEFYTRYMERKYSRIPK
>NZ_CP048209.1|WP_162360583.1|4634599_4635820_-|LysM-peptidoglycan-binding-domain-containing-protein
MPYVVQPGDTLLRIARMFNVNKESLLAANPGLSSAKPLSPGLLLSVPAQTAFIYRVQPGDTLLGIACKFGLSLQDIISANRHQELKQLLPGALLTMPCAGSGRIVDGRAEYGQRELTADAEALLKAYPFLQVEKIGASVMGKPLIAIRLGEGPIKLHVNAGMHANEWITTPLLMTFLEDAARAASSGEKLCGIDMQALLQRVTLWVVPLVNPDGAELAQEGLRPDHPHAAELLRWNKGSDRFNKWKANIRGVDLNDQFPAFWEEETSRRGNDGPGPRDYPGPNPLSEPEARALAEFTAEQRFDLVVALHTQGQEIYWNYRGYEPPESERIARKLGKDSGYKPVKLSGSDAGYKDWFILQFRKPGFTVEIGYGVNPLPVEAFPDLYDEVRMLLAAALEAARAQEKQE
>NZ_CP048209.1|WP_162358554.1|4636046_4636856_-|glutamate-racemase
MQQPIAILDSGVGGLTVAKEIMRQLPREKIMYFGDTARTPYGPRPAEEVIRFTRQIVDYLIQFRPKMIVIACNTATAVALEDIRSRVAIPVVGVIHPGARAANGRTLTGIVGVIGTEGTIRSGAYEHALKQLSPSINVISLACPRFVPLVEQGNFRSQETQEAVETSLQPLKARSIDTLILGCTHYPFLSDTIASVMGKDVMLISSADETAREISTILHDRNRLTREGELPVHQFFCSGDARMFRMIAQQWLGEQIELTPVVWQVPKIG
>NZ_CP048209.1|WP_162358555.1|4637196_4638495_-|alpha-glucosidase/alpha-galactosidase
MPKITFIGAGSTVFAKNVLGDCLLTPALQDFEIALFDINPERLSESETMLNHIKNTVGSKMVIKSYADRKEALRGAKYVVNAIQVGGYDPCTITDFEIPKKYGLRQTIADTVGIGGIFRNLRTIPVMLDFAKDMQEVCPDALFLNYTNPMAVLTNVMNTYGGIQTVGLCHSVQACVSGLFDSLGLDQTGVQSKIAGINHMAWLLEVTKDGVDLYPEIKRRAREKQNEKHWDMVRYEMMLNFGYYITESSEHNAEYHPYFIKRNYPELIERFNIPLDEYPRRCIEQIGNWKKLKEEIVNNPKLEHKRTHEYASYIFEAIETNEAFRIGGNVMNTGLITNLPKEACVEVTCLVDRNGITPTFVGDLPPQCAALNRTNINTQLLTIEAAITGKRDHIYHAAMLDPHTSAELSMDDIKAMCDDLIEAHGSWLPAYN
>NZ_CP048209.1|WP_162358556.1|4638670_4639573_+|AraC-family-transcriptional-regulator
MTQPAAPARGKTRNPDHSKFTVMNNSQPAQGELSVLFSGEGKTVPGHGIGPAVHNYYLIHTVIGGRGKFEIDGQSYSCSRGDTFIIFPDELFSYVADEAEPWHYVWVAFKGHAAEHLLLSLGFSAASPVVHAKDIRALASLYRKIRGTLELTPYPELADLEASGHLRVLLKELGLLNDGKLVFNSLAILPDIERQIKRAVRWLSFQYAQPISIEELSRSLGYHRTHLSKMFKQVTGVSPMQFLLKVRMERAKELLNDQHYLSIDQVASSVGYPDALYFSKQFRKAFGCSPSEYRAQARNR

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Crispr_ID: NZ_CP048209_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_16

4667623-4667696

Orphan

Consensus_repeat	Method
GCGGACAGGAGATCCGTTATTCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_16

>merge|NZ_CP048209|16|4667623-4667696|CRISPRCasFinder
GCGGACAGGAGATCCGTTATTCGCTTCTTTATGACGTTTTGTCGTGTGCTGGCGGACAGGAGATCCGTTATATC

>NZ_CP048209|16|14|4667623-4667696|CRISPRCasFinder
GCGGACAGGAGATCCGTTATTCG	CTTCTTTATGACGTTTTGTCGTGTGCTG
GCGGACAGGAGATCCGTTATATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162360586.1\|4674825_4675455_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048209.1\|WP_162358578.1\|4661587_4663039_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP048209.1\|WP_162358576.1\|4659505_4660315_-\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP048209.1\|WP_162358587.1\|4675833_4676343_+\|heme-iron-utilization-protein	unknown	unknown	gnl\|CDD\|200360
NZ_CP048209.1\|WP_162358574.1\|4657508_4658255_-\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP048209.1\|WP_162358577.1\|4660476_4661298_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236717
NZ_CP048209.1\|WP_162358571.1\|4652504_4654802_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|177659
NZ_CP048209.1\|WP_162358582.1\|4669101_4670058_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378389
NZ_CP048209.1\|WP_162358573.1\|4656505_4657363_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162358583.1\|4670054_4670654_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237125
NZ_CP048209.1\|WP_162358584.1\|4670844_4672011_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224387
NZ_CP048209.1\|WP_162358580.1\|4664046_4667196_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP048209.1\|WP_162358585.1\|4673061_4674186_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224196
NZ_CP048209.1\|WP_162358579.1\|4663230_4663917_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP048209.1\|WP_162358581.1\|4668202_4669042_-\|phospholipase-D-family-protein	unknown	unknown	gnl\|CDD\|197267
NZ_CP048209.1\|WP_162358586.1\|4674290_4674707_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|226134
NZ_CP048209.1\|WP_162358572.1\|4655132_4656275_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_CP048209.1\|WP_162358575.1\|4658863_4659325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360585.1\|4672067_4673156_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP048209.1\|WP_162358588.1\|4676373_4676847_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162360586.1\|4674825_4675455_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	0.00176112
NZ_CP048209.1\|WP_162358578.1\|4661587_4663039_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.25408e-92
NZ_CP048209.1\|WP_162358576.1\|4659505_4660315_-\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	2.76392e-30
NZ_CP048209.1\|WP_162358587.1\|4675833_4676343_+\|heme-iron-utilization-protein	gnl\|CDD\|200360	TIGR04109, heme_ox_HugZ, heme oxygenase, HugZ family. Members of this protein family are HugZ, a class of heme oxygenase that belongs to the PPOX family (pfam01243) and lacks homology to the HmuO family (pfam01126). Characterized members of this family include HP0318 from Helicobacter pylori and CJ1613c from Campylobacter jejuni. This enzyme releases iron during the conversion of heme to biliverdin.	9.45904e-43
NZ_CP048209.1\|WP_162358574.1\|4657508_4658255_-\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	1.66342e-30
NZ_CP048209.1\|WP_162358577.1\|4660476_4661298_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	3.20902e-37
NZ_CP048209.1\|WP_162358571.1\|4652504_4654802_-\|alpha/beta-hydrolase	gnl\|CDD\|177659	PLN00021, PLN00021, chlorophyllase.	2.72594e-06
NZ_CP048209.1\|WP_162358582.1\|4669101_4670058_-\|hypothetical-protein	gnl\|CDD\|378389	pfam10099, RskA, Anti-sigma-K factor rskA. This domain, formerly known as DUF2337, is the anti-sigma-K factor, RskA. In Mycobacterium tuberculosis the protein positively regulates expression of the antigenic proteins MPB70 and MPB83.	1.51356e-07
NZ_CP048209.1\|WP_162358573.1\|4656505_4657363_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.97714e-29
NZ_CP048209.1\|WP_162358583.1\|4670054_4670654_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237125	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional.	4.11032e-37
NZ_CP048209.1\|WP_162358584.1\|4670844_4672011_+\|hypothetical-protein	gnl\|CDD\|224387	COG1470, COG1470, Predicted membrane protein [Function unknown].	2.7664e-74
NZ_CP048209.1\|WP_162358580.1\|4664046_4667196_-\|PAS-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.73817e-53
NZ_CP048209.1\|WP_162358585.1\|4673061_4674186_+\|ABC-transporter-permease	gnl\|CDD\|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	4.62674e-31
NZ_CP048209.1\|WP_162358579.1\|4663230_4663917_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.64845e-07
NZ_CP048209.1\|WP_162358581.1\|4668202_4669042_-\|phospholipase-D-family-protein	gnl\|CDD\|197267	cd09170, PLDc_Nuc, Catalytic domain of EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Catalytic domain of an EDTA-resistant nuclease Nuc from Salmonella typhimurium and similar proteins. Nuc is an endonuclease cleaving both single- and double-stranded DNA. It is the smallest known member of the phospholipase D (PLD, EC 3.1.4.4) superfamily that includes a diverse group of proteins with various catalytic functions. Most members of this superfamily have two copies of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in a single polypeptide chain and both are required for catalytic activity. However, Nuc only has one copy of the HKD motif per subunit but form a functionally active homodimer (it is most likely also active in solution as a multimeric protein), which has a single active site at the dimer interface containing the HKD motifs from both subunits. Due to the lack of a distinct domain for DNA binding, Nuc cuts DNA non-specifically. It utilizes a two-step mechanism to cleave phosphodiester bonds: Upon substrate binding, the bond is first attacked by a histidine residue from one HKD motif to form a covalent phosphohistidine intermediate, which is then hydrolyzed by water with the aid of a second histidine residue from the other HKD motif in the opposite subunit.	6.0921e-51
NZ_CP048209.1\|WP_162358586.1\|4674290_4674707_-\|VOC-family-protein	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	1.98046e-61
NZ_CP048209.1\|WP_162358572.1\|4655132_4656275_-\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	3.15619e-63
NZ_CP048209.1\|WP_162360585.1\|4672067_4673156_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.08728e-94
NZ_CP048209.1\|WP_162358588.1\|4676373_4676847_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	4.92999e-11

>NZ_CP048209.1|WP_162358580.1|4664046_4667196_-|PAS-domain-containing-protein
MNGRLRALVLVFVLIVGFACTAIFSVVETMHQKRDIYRQLDQTIQLQRQFIDKWLDSRMSDIRIIADDAAANKGDLKHLEQLIGIITSQHSEFRSISFIHPDGMSLTGINARDRSYFKLAMEGKASISDVIRSRMDGKQIIVFAAPVIGGAGSSIGVILGTVELTTIEQLMRQFTYGERGQTYIVDRQGTLITGEGSGGEQPVKIRPALMDQALNGVKSKRAYDDYRGIPVYGVYNWAKNGSWLIVGEAARQDVLASLYTEITYAGLIILLSMVLAALVMLRVSKRIAAPVNHLLRGVRKVKEGGYDYRIHPAVLDSTTMEFQQLGAAFNAMSDTIEERTEALRTERNFASSIVDTAQSLIVVLDKEGRILRFNRSCEQATGYSFDEVRNASLFEKLVPEDEHAALQSFFQCLLTTGSGTVYENHWRTRTGETRLIAWSNTIVREPRGDIMRIIGIGTDITEQRKVERELRESEERFRLIVGSMEEIVATFDSELILTGIYGRTMDDYAVHNGAPLRGMTLHELMQPEDASLHEDAQRLALREKTTVIDWSMYMPDGAERSYQTSYSAFRDNAGDIKGVISVSREITQLKEAEAAYRETQERMNGILESITDAFIALNTDWTFAYVNSEAKRKLSRRHAEIMGRHLLEVLPEIRETAIYEHCRLAMEEQLPYSVEGYMPFLDAWYEVHIYPSRDGLSIYFQDVSVRKELEQTAAESQMRLATIIETVPSGIIVVGKDGRIAMANRMAETIFGMDKETIVSRKYDDRIWELYDMDGRFLPVEAFPVSIARRTGLAVTNVEYMYKRPDGERAIISCNCSPLFDAEGNLNSVLVALSDITGRVAIQSALQAANEELQKLSALDGLTGIFNRRYFNEQLRAEWSRHALQQETLSLILLDIDCFKAYNDAYGHLGGDTCLKTTAALIRSSLHAPNRFVARYGGEEFAVVLPGTSLEEAAALAESLRRRIERKEIEHANSKVSRFVTISLGVASVVPAPGSDEESLVSAADECLYEAKRKRNRVVVQSEHEHAAHAGTRGIPGEDGGDGLAGILT
>NZ_CP048209.1|WP_162358579.1|4663230_4663917_+|TetR/AcrR-family-transcriptional-regulator
METTNETQNCRYTDESIKNKYVAKLLHPVKSNGFQSFRMDDIAKTMDLSKATLYKYFQSRDEIIDYLTKLIIKYVIGAECQFESGSPDAYMRGIRSSFAQTLLIANYGTEAFFGDLREVYPQMMASIDVAISERNERLRRFFEKGIEEGYLNDSNATLLIIQDELMFRNLLDPHYLMKHNLTLRTAISDYYDIRKRQLFKPDVYDQIDDSDMAERIEQLVRKVTYGVY
>NZ_CP048209.1|WP_162358578.1|4661587_4663039_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MSNATVANIRFWPIMTAIFFGAFLSILGISTINVALTIFMQDFDASLSTVQWTLTGFMLSLGTIAPLTGYLGSKFGFKNVYLFAMIGFVGLSVLCGFSWNIGSLITFRILQGLFTGLILPATMTIIFQVIPREKQPFAVSIWGLSAMLAPAFGPTISGWLIEKLSWHWLFFINVPIGIIAIIFIMIMIPSYRIGQPSPLDKLGLLTVMVSSASLLVALSQGRQWGWESGRTLGLFAVGLVSLAAFILLELRSKDPLLNLRVFGNFRFSITLVANTIITISLYSGTLLVPLFLQNVQQTSAMDTGLILLPSSLVMALAMPIAGKLYPKVGAKWMTIAGLALIIYGSYEMTQLHSDSTHFYIILWMAVRNLGVSLAAAATSTAGMEEIGPTMVGHASSVTNWVRNVGGSFAIALFTSLLASHTLTHATDLTQSGKESAKLIPLLSFTMSVNDVFLIATFIAVASIPFTLLIRKKVKAVQTGAVAA
>NZ_CP048209.1|WP_162358577.1|4660476_4661298_+|helix-turn-helix-domain-containing-protein
MSASGKQLPSVIEEQGASAVIVGHFNEDDVYFTKRPYGMSDWLITYTLDGSGYFLIDGEERFCQAGDVTVMQPGVPHQYGTRQGGHWHFVWAHFTSRISETNLLPVQKLLIHAVDNASARRRIGRAFKRLASDAFERGTYWSELCENTLREVILLLAQRHSRPLDPRIEEVRHLLSSRMREPVLIEELAREVGLSPSRLSHLYKESTGMSIIDSLNDMRIRQAAVLLEHAGRSATEVAADVGFENYNHFANQFRKRFGVNPRQYKRRGAANPD
>NZ_CP048209.1|WP_162358576.1|4659505_4660315_-|phytanoyl-CoA-dioxygenase-family-protein
MAHVLRAITEEQKRQFDTEGYLVIKGLFSADNLTEIEQTFETMSHERIPGYFEPDLKGDSADPLQRYPRVMHPHRFNETAKRFMLHPPVLEVLADLYGEEAYAAQSMFYYKPPGSRGQALHQDNFYLKVEPGNCIAAWTAVDPAHEENGGLLIVPKTHAHEISCPDEADTKESFTTHYVKPPKDGVVMPVIMDKGDVLFFNGNLIHGSYRNKSKDQFRRAFICHYANSSAATINVHYNPLFKADGTEIRLADNPDGGPCGIEMGEFTYH
>NZ_CP048209.1|WP_162358575.1|4658863_4659325_+|hypothetical-protein
MYIEAAYAASNFLDNIKLPEWQLYRHSRRSAARKAARMAALSALPPVCGAKSCPNGSFIGTPAGLRREKLPEWQLYRHSRRSAARKAARMAALSALPPVCGMESRRNGNFVGEISSAAPQKNNGRMRDTAAQSASGLPRQAEPGRESMPSCQS
>NZ_CP048209.1|WP_162358574.1|4657508_4658255_-|phytanoyl-CoA-dioxygenase-family-protein
MSNITNGRLTQSEVDYYNEQGYLLYKNQLFDAEKQAELSTIFEEQWEMVGRRLNSELDTPHFRDERLLKFLLADEVLDLVEPILGPNIGLWSSHFICKEPLIGKQTPWHEDSAYWKGRLDRFDKIATVWLAIDPSNKENGCMRVIPGTHRNGFSDYEAVNENENIFSSQIKNIDESKAVYFELEPGQCSIHDSRIIHGATPNKSPNRRCGYTMRYFSTEARVLPEKNPGFKIWLARGKDVAGNPFVNV
>NZ_CP048209.1|WP_162358573.1|4656505_4657363_-|AraC-family-transcriptional-regulator
MSGASVYQGPERLLNESFMTQASPVRLFKHRVDGRIDTHWHEFFEMGFIVKGSGTHVLNGVPMRLGRGDAFLLTPADFHSLEPDPGETLELYDLIFSDLFIRDPLLELLFERGMHHTAGYDAADTAAAEREFELIWAEFAEWRAGSDMLVQGGVERLLIQLSRRSGEAGKDQGGGHAVNQPIQPAVRKALIYIQHHFRDTITLESAAGSCGLSPNYFSECFRKGTGVTFQTYVQELRMQFAKSLLKATRLPVTEICFASGFNTLPHFERAFKKRFGASPRELRKQ
>NZ_CP048209.1|WP_162358572.1|4655132_4656275_-|metallophosphoesterase
MRRLPRRLIIFIGVFTVLQVYVGWHLKWFLTAWLDWRGAAFEAVFWPVFAVLTYSYLMSRMLRRILPKPAAKGLKVIGSYWLAVFEYAVLLLPFADLAAWPLRASSLSNADAILIAGTAVIAILLAVLLRGSWNAWMPVVREYEIAIAKRAGELEKLQIVVASDLHVGTTVRRRHIARLVRIANGRQPDLMLLAGDVLDDDVEPFIRRNHGQQLAQIAAKFGTYAVLGNHEHYGGGTETYVPAMNGLGMPVLLDEAVSVADSFYLVGRKDKTDRARKSVAELLAGLDPDKPVILMDHQPSALREIADAGVDVSVSGHTHRGQMAPNHWITRRIFELDWGYKQIGRLHAFVSSGFGTWGPPIRIGSRCEIIAITVRFGCQE
>NZ_CP048209.1|WP_162358571.1|4652504_4654802_-|alpha/beta-hydrolase
MDLELETSYMPLPVPPQRDSLWKRAAAWFVRRGRMTLRFDTQVWRAGIVGLWAVFSALLAVTALGMPTGLGAVFDAALFVLAGTIAMGAAGIVAAFALSICYVPVPRLTIGIAAFAGYAVWFICDKASLGDWMSLACAIVLPAIGLAGGLFVGLLIHRRVPTAMKIALVVVIAATGLSFDKWPINVYGDVPADAQLVTAEPEVAQIMADNPADDGTYPVKSFTYGSGTDTKRSEFASGAALKSATVDASAYIHRWKWLRSLFWGFDETELPVNGRVWMPEGDGPFPLVLIVHGNHLMEQFSDDGYAYLGEMLASRGFIAVSVDENFLNYSFWGNIPDNDYKVRAWMLLKHLQQIASFNDQAGSPFYHRVDLGQVALIGHSRGGQAVAMAADRSKWFAKDETLAGMDKIHIQAVIAIAPTDISIDKQQAQLKDTYYLSLQGASDGDVDSFGGERQYIRTRFTPGSDRFKSTLYIGEANHSRFNTSWGTMDDSLPGGLLLRKDEMMDAGDQRQVAKVYVSAFLETALHGNEQYRRLFSDYRAGGEWLPEATYMNRYEDGSFVPIARIDGDYDKAKLDNGVTAKADRLQWTEEAAEDRNGNDKGTRGAVLQWKQGDGSYTLELPQSFTASSAQEFVFNMTNLERDLPGFDENARKSGGSSIPLPDIDVELASRNGAVVRMPLSDFKAVTPLPYTHFTLFPWMEKRAMNGKYKEPTEPVFQTYSLPLDRFRSAESGFDPARLSRITFYFKSDQGKVMLDDIGIANVLPE
>NZ_CP048209.1|WP_162358581.1|4668202_4669042_-|phospholipase-D-family-protein
MKRIPFVLAAVLSIFVAGCSIYASPTASAPEAEGISAEWAFTQAGQKPDRLLIGVIDGASSTLDIAIYSLTKPDIVDAIKRAKKRGVEVRIITDRIQSGGKSQQEALKLLGSAGIPMKRNTHSGLMHLKMTIADGKTATTGSFNYSKSASTDNDEVLMVLRNEDVARSFERQFQAMWEDTSGFTAISPKIADGSADEDAGAESAPDAASETDADTNNATNSDINADTNAEAGTSASVGSGTAFRSCAEAKAAGKTPLRKGDPGYSAKLDGDKDGIACEK
>NZ_CP048209.1|WP_162358582.1|4669101_4670058_-|hypothetical-protein
MNERQDCEPEACVKHYAEEDWIDWLLGGKPAAERDAMLRHLAHCARCLATRQTWEPLLAGDMNAAAQHTAPERLRAEAVQPQSGEPWPGSASAAGGLAARDPQSGEPWPGSAPAAGGLAARDPQPEPPILSAALYRRLRLRFQLRSAGLRVRRALHAQRRVGIVAAAAAMLLVVCATGLYRSSQNQEEQRKVSAATLEPTAATFLLDPQTAGYKVHPELEELGDGYIWFNNMSGEVYVMLEGLLPSVGHDVQVWAVDETKHEHVNLGLLHRDQASRAHLYVKQSLLLQAHHLALTVEPSGGSRNPTEPEVLVFKLQRG
>NZ_CP048209.1|WP_162358583.1|4670054_4670654_-|sigma-70-family-RNA-polymerase-sigma-factor
MGESGDNRSGDLLREMREGSVEAFDAFYARYSPLIFGIALRMLGDRMEAEDACHDIFLEALRRGGRYDPQRGSVDAWLAIMTRSRCLDRLRRGKKLVHREAWEADAIPGTEDAAEDKVLTRLQREDIRDAIRALPANQLQAVVSSYYGAKTHSEMASAWNVPLGTVKSWVRYGLNNIRKQLEKRGWQADENDGTKEVRK
>NZ_CP048209.1|WP_162358584.1|4670844_4672011_+|hypothetical-protein
MLRACRKRSFSWLLAISFILGATTLGFHSGTAAAAGAVELYTPYLELSAPPGDSISYAIDVINHGSSTETVNIGFDAKGNQWNEQLTAGGRTVTRLAVKAGETQTVNLQLDVPLEVNKGTYAFQVNAGGVSLPLAVDVSEQGTFRTELTTDQANMEGHSDSTFTFSATLRNRTAEKQTYALAAQAEPGWDATFTDGGNSVTSVEVDPNGEKTISIAVKPPETVKAGTYKIPITAGNNSTSANTTVEAVVTGTYDLKLGTSNDVLSTDVTAGSTRHLDMVVTNSGSSELKGVSLSAETPSGWEATFEPATLDSIAPGQEAHVQATIKADKKALAGDYVVNVTAAAPEKSADAQLRVAVKTSVLWGWVGILIIIAVAAGIYYLFRKYGRR
>NZ_CP048209.1|WP_162360585.1|4672067_4673156_+|ABC-transporter-ATP-binding-protein
MPIIELSWLTKRYDGQTAVNGLNLTIAKGEIFGLLGPNGAGKTTTILMMLGLTEPTSGRARVCGLDPTRQPLQVKRRVGYMPDDVGFYEDRTALDNLLFTARLNRIAPTPARKLALELLERVGLSDALEKKVGAFSRGMRQRLGIADVLIKRPEVIILDEPTLGIDPEGVRELLQLIRDLSRLEGLTVLLSSHHLHQVQQICDRVGLFVRGELIASGDVGSLARQLDDDRSVTVELEVSGWNAALGETLAGLEGVLAYNGPRYELPDGGGEAAAGDGAAANAEIAGYASAGGASEAAGATAQYGAVRVTLRCSRDLTTEAAKAVIENGADLHAVQRKQYGLDDIYHRYFEGGGTVDRNHGTT
>NZ_CP048209.1|WP_162358585.1|4673061_4674186_+|ABC-transporter-permease
MRCSASSTAWTTSTTGISKEAGPLIETTARRDGFLGRLSRLWGRFHPAAGETDALEPRTASPFWVIVQKEFGDHMRSWRFGILIGIITLACIGSIYAAITALKDGVKTQDTDTSFLFLQMFTASDGTLPTFATFVSFLGPLMGIALGFDAINSERGKGTLSRLLSQPIYRDDFIRAKFTASLLLIAVVLFALGFLVMGLGLFTIGYPPTPEEVLRVVLFLVIGVIYVGFWLNLSMLLSIRFRQAATSALSGIALWIFFSVFYGMIMGIVDKATSPPETSALGILLRHANMMLLLNRLSPSYLFTETTSTMLTPGIRSLGPLTTEQVVGAIASPLPLAQSLLLCWPQLVGLLAATILCFGLSYLLFMRQEIRSRA
>NZ_CP048209.1|WP_162358586.1|4674290_4674707_-|VOC-family-protein
MSIQANKIFINLPVKDIKKSVTFFNEVGFGFNAQFTDENAACMVISEHIYVMLLSEAYFQTFTKKSVADAAASTEVILAISASSRESVDEIVYKALSSGGSISNDPQDHGFMYAWSFQDVDGHLWEVIYMDESAVAQG
>NZ_CP048209.1|WP_162360586.1|4674825_4675455_-|GNAT-family-N-acetyltransferase
MNANEKRHAERYDAFAGLEIRRLGGEYADDAHRLMLDVVSRLPDSALFATDDGGYFTELLARGGELYGAFGNGKLAAYSTLAYPGPGDGNLGREFGVPEEELDRVWMLDATIVHESARGRGLQRFFHELRERRARELGARCLYSTVHPANDASRRNLEAAGFVRQFTRPMYGGLMRHCYAKRLSGRDERHANPSRPADVHAGEPDGQGV
>NZ_CP048209.1|WP_162358587.1|4675833_4676343_+|heme-iron-utilization-protein
MKPIDKETMRTQYLAFADSVKTLMLSTVDENGNPFISYAPFVKRDGKFYIYISRIANHFRHLENNPFVDVMLIEDETQTANLFARTRARFVCEAVNAGNDGFDDVFDLFGGKFGANMITMLRGLDFSLFELTPRAGRYVAGFGQAYDIDLSGDEFNHVNRDGHGQTAKA
>NZ_CP048209.1|WP_162358588.1|4676373_4676847_+|DinB-family-protein
MTMSHYDSVLPIWSAIQSRFFKTASQLPAEDLALKIGPASIGYMLQHNAEVEYMFTEWYFGRPMPEHLKLSTNAGPGGRQGDYSDLGALLKLLGDSNEHLRSAMRDLPEEAWTVPVESPMGGPATTPLEAVGRLMYHTGIHAGQISLIQKNTRTVQS

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Crispr_ID: NZ_CP048209_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_17

4744594-4744769

Orphan

Consensus_repeat	Method
TGCTGCCTTCGGGAAGGATTTCC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP048209_17

>merge|NZ_CP048209|17|4744594-4744769|CRISPRCasFinder
TGCTGCCTTCGGGAAGGATTTCCTGTGGTTTTTCCGCCCTGACGCCGAAATCCTGCCTTCGGGAAGGATTTCCCGAGGATCCCCAGCCCTGAGCGCCGAATTCCTGCCCTCGGGAAGGATGTCCCGAGGACTCGCCACACGCCAACCTTGAATTCCTGCCCTCGCGATGGTTTCCG

>NZ_CP048209|17|15|4744594-4744769|CRISPRCasFinder
TGCTGCCTTCGGGAAGGATTTCC	TGTGGTTTTTCCGCCCTGACGCCGAAA
TCCTGCCTTCGGGAAGGATTTCC	CGAGGATCCCCAGCCCTGAGCGCCGAAT
TCCTGCCCTCGGGAAGGATGTCC	CGAGGACTCGCCACACGCCAACCTTGAAT
TCCTGCCCTCGCGATGGTTTCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162358646.1\|4737323_4739942_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|279307
NZ_CP048209.1\|WP_162358652.1\|4745730_4746411_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|129802
NZ_CP048209.1\|WP_162358658.1\|4754924_4755590_-\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
NZ_CP048209.1\|WP_162358649.1\|4741797_4742688_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP048209.1\|WP_162358655.1\|4748957_4749935_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|237004
NZ_CP048209.1\|WP_162358650.1\|4743458_4744076_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162358656.1\|4751967_4753074_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376564
NZ_CP048209.1\|WP_162360592.1\|4744054_4744420_+\|transposase	unknown	unknown	unknown
NZ_CP048209.1\|WP_162358643.1\|4733416_4735042_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|274368
NZ_CP048209.1\|WP_162358651.1\|4744846_4745734_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP048209.1\|WP_162358642.1\|4732718_4733411_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP048209.1\|WP_162358648.1\|4741324_4741849_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP048209.1\|WP_162358657.1\|4753400_4754816_-\|NADP-dependent-phosphogluconate-dehydrogenase	unknown	unknown	gnl\|CDD\|236453
NZ_CP048209.1\|WP_162358645.1\|4736942_4737119_-\|putative-motility-protein	unknown	unknown	gnl\|CDD\|379452
NZ_CP048209.1\|WP_162358653.1\|4746499_4747567_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
NZ_CP048209.1\|WP_162358644.1\|4735740_4736832_+\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP048209.1\|WP_162358659.1\|4755630_4757625_-\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_CP048209.1\|WP_162358647.1\|4740140_4741136_-\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176232
NZ_CP048209.1\|WP_162360593.1\|4749931_4751263_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173004
NZ_CP048209.1\|WP_162358654.1\|4747570_4748587_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223528

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162358646.1\|4737323_4739942_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	2.46555e-31
NZ_CP048209.1\|WP_162358652.1\|4745730_4746411_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|129802	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit. This enzyme is also called serine deaminase. This model describes the beta chain of an iron-sulfur-dependent L-serine dehydratase, as in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in E. coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	4.95033e-59
NZ_CP048209.1\|WP_162358658.1\|4754924_4755590_-\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	4.84616e-129
NZ_CP048209.1\|WP_162358649.1\|4741797_4742688_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.03486e-16
NZ_CP048209.1\|WP_162358655.1\|4748957_4749935_+\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|237004	PRK11863, PRK11863, N-acetyl-gamma-glutamyl-phosphate reductase; Provisional.	0
NZ_CP048209.1\|WP_162358656.1\|4751967_4753074_-\|IS110-family-transposase	gnl\|CDD\|376564	pfam01548, DEDD_Tnp_IS110, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family includes an amino-terminal region of the pilin gene inverting protein (PIVML) and of members of the IS111A/IS1328/IS1533 family of transposases. The C-terminus is represented by family pfam02371.	8.69281e-18
NZ_CP048209.1\|WP_162358643.1\|4733416_4735042_+\|HAMP-domain-containing-protein	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	6.25149e-64
NZ_CP048209.1\|WP_162358651.1\|4744846_4745734_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	4.71189e-95
NZ_CP048209.1\|WP_162358642.1\|4732718_4733411_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.07125e-80
NZ_CP048209.1\|WP_162358648.1\|4741324_4741849_-\|hypothetical-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.10127e-41
NZ_CP048209.1\|WP_162358657.1\|4753400_4754816_-\|NADP-dependent-phosphogluconate-dehydrogenase	gnl\|CDD\|236453	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP048209.1\|WP_162358645.1\|4736942_4737119_-\|putative-motility-protein	gnl\|CDD\|379452	pfam14070, YjfB_motility, Putative motility protein. This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.	3.2779e-08
NZ_CP048209.1\|WP_162358653.1\|4746499_4747567_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	1.43005e-16
NZ_CP048209.1\|WP_162358644.1\|4735740_4736832_+\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	1.33509e-136
NZ_CP048209.1\|WP_162358659.1\|4755630_4757625_-\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_CP048209.1\|WP_162358647.1\|4740140_4741136_-\|zinc-binding-dehydrogenase	gnl\|CDD\|176232	cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	1.99839e-136
NZ_CP048209.1\|WP_162360593.1\|4749931_4751263_-\|hypothetical-protein	gnl\|CDD\|173004	PRK14538, PRK14538, putative bifunctional signaling protein/50S ribosomal protein L9; Provisional.	0.00992681
NZ_CP048209.1\|WP_162358654.1\|4747570_4748587_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223528	COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	8.92019e-13

>NZ_CP048209.1|WP_162360592.1|4744054_4744420_+|transposase
MCFRSRLSELRSVHRFERERHSLRRASASTNKFRTIRERKCSGEIKRDATVEVVDAKSGCKTHLRLVEYRFLGTRKKWPAIRVLTNRTDLTAKQIARIYAWRWKIEIFRTHSGLLKHDKSI
>NZ_CP048209.1|WP_162358650.1|4743458_4744076_+|hypothetical-protein
MPIKLSFGQLYLPQTSSFAKNLPRAVENFTNKESSPSDRYAKKLTFGNTSLLFLEAILRGRPLQEMADHLESSPWMQRWLGLSSIRASSLHRKLERLPTESLQELCHQAAKKLATMYCDASLRSLGRLAAVDSSMVTLGSKRAEWAYVSKDFHANKLHLSLGLVNETTSYPLRTVLSTAVDSDNDDEVLAALVEPSDVTCVFDRG
>NZ_CP048209.1|WP_162358649.1|4741797_4742688_-|methyl-accepting-chemotaxis-protein
MTAWCKAVQRFTSQKLATKLIASTLVISILIVVAMSFALFIPNASLSRKQIAEQLKLQTESVAVRLDQDIQTKVAKLESLASIGQLNGLDAQKHIDLLRTFSSQNPDMVGAAVSLTLTGESVKLHDGKPVDLSDRTYNPRFVKPILYITDTVRELAKGDLRPRLNVKTKDELGILAGSMNAMLESLSATIGQVSAASGSVANAALQITASTEEVAQGSVDQADRARTMSRLFAGLESSMDQVASNANHAKGLSQEAVDIAGEGNSFINTSIDKMEQAKRRWRCWSGIRRRSATLSK
>NZ_CP048209.1|WP_162358648.1|4741324_4741849_-|hypothetical-protein
MALLERDSKKIGDIIEVINEIAEQTNLLALNAAIEAARAGDQGRGFAVVADEARKLAERSGEATKQIATIIKGMQDNAARSVQAVVEGVSQIAQTRQSFDGIRMKVNDTYRMVGEITRSSEDQSGKAYGMMGEIESVASISEQAAAAAEQTAAASQELSALVEKLNESVEMFIY
>NZ_CP048209.1|WP_162358647.1|4740140_4741136_-|zinc-binding-dehydrogenase
MKAIVLHAPGEPHTFALAELPVPEPGIGEIRVRIMAASLNPADYKMAKNGNPAWTYPFVPGLDGAGIVDQVGEGVTAWSVGDRVAYHGNFTKPGSFAEYGIAQATAAARIPDGLSFEAAAAFPCAGMTAYQALIRKMNVRPGHSILIHAGAGGVGGYAVQLARALGASPILATASAANADYVKSLGADAVIDYNTEDVRERVMALTNGLGADYTLNTINRQTAQADLSALAFGGQLACVAGAPETVADFQPSHRTFTVHKMMLSGAYLSGDSRAERDLAAMAEAFMAMLAAGEIDPMIGKRIALAEVPQELTRLAERHVRGKIVVVVQEQQ
>NZ_CP048209.1|WP_162358646.1|4737323_4739942_-|cyclic-nucleotide-binding-domain-containing-protein
MKIAEIAMFQELSNRELAKLLGKMERQTLQPGDVLFAQGEFGDSMYIIDEGSVELFVQADGAKQSLAVLGEGDTLGEMALLTGEARSATAVAAAAVVLLKLDRDAFDALITEQPAISAYFIRLISRRLIDTNERLRDSKEQTSQWLQRELAQLPDKLVQLLLWLSQFSAATVPFAERRFGLALCKETEIHPALRKFLAVEPGEPDRCCLKPDVRAAVAELAGAAYDYKTRRQWIDEAEAFYAQHEQWLELGALYRDEGKWESVLHAFARSETQSEWQAGEWFVLLGQCPEHALLGSFPAMERYVRLSLAHGPEQGLRLVEAALREGTWSSRPDELIALYEWGAACSRSLRLHHRALEYLQLAESSANAAYGRAPARHDEERDFQLAQRQLSSHKSVLFAERASRMFKPSQWAEWLALAAAAGMIVLFALLPPFAGLTDKGMLFIGIAVAAVLLWIVNIVPDYIVALGMAMLWVLGGVVEPETALSGFASPTWLYMIFIMSLSVVIAKSGILYRLSLHALKRFPAHFRGQLWGLVAGGIALNPLIPSSSAKVSLGVPIARTLSESMGFKDRSKGAAGLGLAAMVFYGFTAPFVLTGSYTNVMAFSLANTAEPVTWLEWALYALPAFVVFAAVMLLVLSWLFQGSSESVKQVSASVLDEQLRLLGPLSREERISAGVVVGCIVMMMLQPLHGIDSTWVMLLGFAVLVITGVLDRQSLLGGIDWTFLLFLGVAFSFANAAGELGIVDAMTGYLGGHMSLFLGSPALFLTAVIALCFAVTLVVRDDAAVILLVTALLPLAAKAGIHPWILVFVVLLSTDPFFFSYQSPTYLTAYFSSDERAFSHRQGQQIALAYAAAVVLAVIASIPYWQWLGLLG
>NZ_CP048209.1|WP_162358645.1|4736942_4737119_-|putative-motility-protein
MDIPAVSVSMSQGKLMNDVGIGVLKMATDQMTQQSQQLTQMMAQSVQPHLGSTIDLRV
>NZ_CP048209.1|WP_162358644.1|4735740_4736832_+|lactonase-family-protein
MEVRYTMATTFAFIGSYADAQGPGVYACAYDEQTGALKLIGQTDGLQNPTFLVPDAERRTIYTVLEGKDAEGRKCGAAAAYRFDPASGSLQRLNEAITLPATTCHITLDNTRHFAMTASYHGGMISLSPILDDGGIGPTADMHRHEGSSVHPAQTQARAHSVIVDNANRFAVVSDLGLDKLFVYELDLANARMTPRSETSIAPGSGPRHFVFHPALPFGYGINELNSTMTVYAYDANEGSLEAVQTVSTLPASFEGDNACADIHLSPDGKFLYGSNRGHDSLAVYGVDQASGRIEPVEHVSTLGGHPRNFALSPDGRFVLCANRDGNNIVTFRRDAATGKLQPTGSELRVSKPVCIRFAAIAD
>NZ_CP048209.1|WP_162358643.1|4733416_4735042_+|HAMP-domain-containing-protein
MRTSIAFRLFAVTFVVIMLFVGLLLALLAAGFSSFYEQRQKSDLKAELRQMGREYAMLPQRGGIPGMPPYITQFESDYFAKVAVTTVKNGAIATVLMGGSAPRKQVAFRDGTDGNRLNVPGQSEMILVPNPPLQSEIDGIMFAARQWVNNEAELREVMEEGKTLAYRSTPEVLSSQDASVHQLIAVTRVSGSDARNGVVLFAVASLQPVTHAASVFKVLSVYVLGGALVLVLLLSFGYARIVTKPLIRLNALAGRLANPANAERVRWQRNDEIGELARTLDLLADNWHGTLSELQSANEKLRLDIEREKRLERMRRNFIAGVSHELKTPLSLIGGYAEGLKDNIGSGAKREKYAEVILEETRRMAAIVADMLDLSHLESGQYSLKLESFRLPELLSDAADRAAVLGADKSLVVEANLSPGSEERAMAVADRFRVDQVLTNLVTNAVRHAPEGGRIEVTAAADGDDWHIAVYNEGEPIPEEELRRIWGQFYRVDKARSRESGGTGIGLAIVRQLLELHGSRYGVRNERKGVSFGFTLRREQR
>NZ_CP048209.1|WP_162358642.1|4732718_4733411_+|response-regulator-transcription-factor
MDKRVLIVEDEIKLRELIADYLEAEGLTWLEAENGDEAVALFRESKPDLVILDIMMPGLDGYDVCEEIRKQSDVPVLFLTAKGEEEDKLLGYDLGADDYMTKPFSPKVLAAKVKALLRRAEVPRIERSDAAGRQLDMSGMRIDIAGREVALDGAPLAISPKEFDLLLFFASHRNIVLSRDRILEHVWGFDYDGDARTVDTHVKRLRQKLGTRAEWIATLRGNGYRFKVTT
>NZ_CP048209.1|WP_162358651.1|4744846_4745734_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MRFRTLAELAQACAKANRPISAVMLEDQAMESGQTAERERKKMLDYYGIMKEAVRKGIYSDKPSRSGLTGGDAKRLHAYSREHEASLQPHAGDAMAYAIAVSEVNASMGRVVATPTAGSCGIIPGVFVSSQERYGWDDDRMVDGLFCAGALGYVIANNAFISGAEGGCQAEIGSAIGMAAGALVELKGGSPAQSVHAVGLALKNTLGLICDPVAGLVEIPCIVRNGFGAVTALAAADMALAGVRSAIPSDEVIQVMLEVGSAMPSAHRETAQGGLAGTPTGKRIAQQLAKDQRTP
>NZ_CP048209.1|WP_162358652.1|4745730_4746411_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MRFKDVFSIIGPGMIGPSSSHTAGVLTLGRAAAQLFGRQPERAEITFFGSLAATYRGHGSDIAVIAGLLRLRTDDERIPDSPAIAEAAGMKVLIRTSGVPAVHPNTLSVALRGGRRRMSLTGCSIGGGNIEIVEVNGFDLKMTGRYPTVIVYHDDRPGMLAGITRLLGEAGVNIGYMDVDRKARLGEAATAIEADAAIPAKLLARVKRLPNVKEVSYMDVNGGDPA
>NZ_CP048209.1|WP_162358653.1|4746499_4747567_-|dihydrodipicolinate-synthase-family-protein
MRAHSSLSPEQSRALHEGLVIPAHPLALDANRQLDIRHQRALTRYYLAAGAGGIAVGVHSTQFEIRDPRINLYERVLRLAAEEVERARLRRPFIQVAGICGPAEQAIREAKLAAGLGYDAGLLSMGGLHGLTEWELLDRTERIAAILPVFGFYLQPSVGGRVLSYAFWRAFADIPGVVAIKMAPFNRYQTIDVVRAVCASGRRDDIALYTGNDDNIVNDLLTAYRFQADGRTIEKRIAGGLLGHWAVWTRKAVELLEAVKQARQEERLPQEWLTRGIDVTDANAAFFDPSHGFAGCIPGIHEVLRRQGLMQGTWCLNPSEQLSPGQAEEIDRVYRDYPHLNDDAFVREHLAAWLA
>NZ_CP048209.1|WP_162358654.1|4747570_4748587_-|NAD(P)-dependent-oxidoreductase
MRTIEELEAKLAEPSEALVRDIRRIEGDIMLLGVGGKMGPSLARLLLNAIRQAGVGKKVIAVSRFSEAGLQERLSADGAETIACDLLDDAALQSLPDVPNIIYMAGTKFGTTGNESFTWAMNAYVPGRVAEKFRRSRIVVFSSGNVYPFTPVGHGGASEAAAPAPVGEYGQSCLGRERIFEHFSKTYGIPMVIYRLNYAIDMRYGVLLELAKSVKAGKPIQLAMGHANVIWQGDANAIAIRALLACETPVNVLNVTGPETVSIRWAAEEFGKRLGAAPVFAGEESPDALLNNAAKCHKLFGYPRVSLLQMIDWVAEWVEAGGATLNKPTHFQERKGKF
>NZ_CP048209.1|WP_162358655.1|4748957_4749935_+|N-acetyl-gamma-glutamyl-phosphate-reductase
MKHRIFVDGQEGTTGLRIHDYLNKLPHIEVLRIEPDKRKDEETRRAMLNEADLVFLCLPDAASREAVSMVTNTKTGIIDASTAFRTHPDWAYGLPELHSRQRGSIRRSHRVSVPGCHATGFILAMRPLVAAGIVPRDYPASCYALTGYSGGGKKLIADYRNAPREQLLAPRPYALGLDHKHRPEMQRYSGLDAAPLFTPIVGNYYQGDAVAVPLFPRLFAKPAAVRDIQETLAACYRDERFIHVLPYDSAADLDDGYFDLLPCNHTNQLDLFVFGHQDEVLIIARFDNLGKGASGAAIQNMNLMLGLDEGTGLTAANDSLRSTGN
>NZ_CP048209.1|WP_162360593.1|4749931_4751263_-|hypothetical-protein
MPRGISIGIIGPEELVQRILNVLKAFPSFRPIAKTYDTVDEAPGLAEEIADEAEVILASGPVPYNAIREQVRTSAALHYVPLTDTGFYRALSRLKNALGPERRLRVSVDTLGKPMIAKALAEIDETRAEALPYDGPANASKEMLAAHHALLFESGACDAALTAEASVAKALSERGIPNEWIIPTDGNITVALERALLSTETRQSKEAQIVVGLINVDHFERLIQTRASEHEIQKFKLDIHRMLLDYVASLDGYLTHLGGDEYLFFTTRGIFERITGGYKSISLGRSMYRKFGLSLSIGMGFGRSANEAGTNARAALRKSKDAGGDTCFIVGEDRALIGPLAMSDPLEAALALTDAGLIKRAEDAGMTSVYLSKLMAQVARTGQTDYKVHELAAMLDITVRSTHRLLQQWLDHRLIAVADVEKVPKGRPRQIFRLTFLRDAKGG
>NZ_CP048209.1|WP_162358656.1|4751967_4753074_-|IS110-family-transposase
MLRWVQDLQRAYGFTEVIFGAESTGHYFLNVAFALRKRGLTVVLVNPLTTKRNKENRDNKPSKNDAKDAVTIGDVVSRGYYTEWVVHDPVYRQLHALVNEREAMSDALTVIDNQLQTAIDQVFPEFWSVFKHWDGSRARATLRSFPLPADILANTLPELIEGWRTSGLKRAGGTTGIQIASQLLLAAGRSIGVTEAAELGRRIQRLLARYEHLLAQQAEVDVEIAALLERLPPAVLRPLQEVGLSPWFMAVILANTGDLRRYTHGQQLLALAGLNLAERSSGTCKGQVKLAKRGRRQLRKYLYLAVMMLLCNHAGFKRWHTYNIKTLRQKGIHSVLKLVGKLCRILVALAHSGEAFQEQKAAPLRNAT
>NZ_CP048209.1|WP_162358657.1|4753400_4754816_-|NADP-dependent-phosphogluconate-dehydrogenase
MAKQQIGVVGLAVMGKNLAMNIESKGFTVAVYNRSAEKTNELLAETQGRNFVGALSVEEFVNALETPRKILIMVKAGQPTDDTINQLVPYLSPGDILIDGGNAYFPDTQRRNKELSAKGFNFIGAGVSGGEEGALLGPAIMPGGQREAYELVEPILTAISAKVNGDPCSTYIGADGAGHYVKMVHNGIEYGDMQLIGEAYHLLKDVLNLGTSELHDIFTEWNNGELDSYLIEITADIFGKTDPETGKPMVDVILDAAGQKGTGKWTSQSALDLGVPLSIITESVFARFISAMKDERVAASKLLSGPSAPSFEGDRAAFIEAVRQALYASKIASYAQGFAQMRAASEAYGWDLNYGGIAMIFRGGCIIRARFLQNIKDAYDRDPELRNLFLDDYFRGVVENYQGAWRRVVSVAVERGIPVPAFASALAYYDSYRSERLPANLLQAQRDYFGAHTFERLDRKGSFHFQWMANE
>NZ_CP048209.1|WP_162358658.1|4754924_4755590_-|fructose-6-phosphate-aldolase
MKFFIDTANLTDIKKAYKIGVLSGVTTNPSLVAKEGVKFEDRIAEILREVPEVESVSAEVTPDALTAEEMIAQADELIKINDYDKNITIKLPMTLAGLEACRYLSKKGVKTNVTLIFTVNQALLAARAGATYVSPFLGRLDDISEDGVLLVAKVAELFRTHNLDTQIIAASVRHPDHVTRVAMAGAHIATIPFSVIEQISKHPLTEQGMEKFAADWKKAVQ
>NZ_CP048209.1|WP_162358659.1|4755630_4757625_-|transketolase
MPITQTIDQLAVDTIRTLSIDATNAANSGHPGLPMGAAPMAYALWGKQLNHNPANAKWFNRDRFVLSAGHGSALLYSLLHLSGYRVSIDDLKQFRKMNSRTPGHPEYGHTDGVEATTGPLGQGVAMAVGMAMAEAHLAAKFNQDGFPVVDHYTYALVGDGCLMEGISYEAMSMAGHMKLGKLIVLYDSNDISLDGDLSLSFGEQMQKRAESANWHYLRVEDGNDIGQIAEAIAAAKQHASQPTLIEVRTIIGFGSKAAGTYKVHGNPIGREEGAATKKVYGWQYEEEFTVPDEVRAHFDGLKKQGAEKEAAWNALVNAYKAQHPSLSSEFERVVDGKFAIEAADILTFDSSKTVSTRVASGNAINHYIKRIPSIFGGSADLSHSTMTDIAGEPKFAVDTYAGRNVYFGVREHAMGAAGNGMALHGGVKPFVSTFFVFSDYLRPSIRLAALQKLPVTYVFTHDSIAVGEDGPTHEPVEHLAALRTIPGLTVIRPTDGNETANAWAYALQQNEGPVALILSRQNLPVYEATQANVAGLEQGAYVLTETNDKPDVILIGTGSEVSLAVNAKAELEKENVSVRVVAMPSMELFNKQSEAYKQSVLPNAVTKRVSIEAGISLGWERYTGPSGSILSIDSFGASGPSTEVMEYFGFSVSNVVRAAKALLN

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Crispr_ID: NZ_CP048209_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_18

4788891-4789112

Orphan

Consensus_repeat	Method
CGGCCNGCCNGGCGGCGGC	CRT

5 spacers

The CRISPR arrays of NZ_CP048209_18

>merge|NZ_CP048209|18|4788891-4789112|CRT
TAGCTGCCCGGGCGGCGGCTCAGCCGAGTGCCAGTCCGCGCGGCCAGCCGGGCGGCGGCCAGTCGTGAGCTGACCTTCGCGGCCAGCCGGGCGGCGGCTCAGCCGAGTGCCAATCCGCGCGGTCAGCCGGGCGGCGGCCAGTCGTGAGCTGACCTTCGCGGCCGGCCAGGCGGCGGCTCAGCTGCCTGGCCCACGCGGTCAGCCGGCCGGCCATCGCGGAGC

>NZ_CP048209|18|2|4788891-4789112|CRT
TAGCTGCCCGGGCGGCGGC	TCAGCCGAGTGCCAGTCCGCG
CGGCCAGCCGGGCGGCGGC	CAGTCGTGAGCTGACCTTCG
CGGCCAGCCGGGCGGCGGC	TCAGCCGAGTGCCAATCCGCG
CGGTCAGCCGGGCGGCGGC	CAGTCGTGAGCTGACCTTCG
CGGCCGGCCAGGCGGCGGC	TCAGCTGCCTGGCCCACGCGGTCAGC
CGGCCGGCCATCGCGGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162358675.1\|4784626_4785943_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP048209.1\|WP_162358680.1\|4790751_4792374_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP048209.1\|WP_162360598.1\|4795967_4796717_+\|phytanoyl-CoA-dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|368580
NZ_CP048209.1\|WP_162354585.1\|4795232_4795922_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162358670.1\|4777080_4779858_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP048209.1\|WP_162360597.1\|4780751_4781759_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP048209.1\|WP_162358674.1\|4783724_4784612_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162358682.1\|4794291_4795170_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|236717
NZ_CP048209.1\|WP_162358683.1\|4799576_4800467_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162358678.1\|4787931_4788810_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162360599.1\|4798385_4799426_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|211420
NZ_CP048209.1\|WP_162358684.1\|4800483_4801431_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP048209.1\|WP_162358685.1\|4801528_4803265_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP048209.1\|WP_162358677.1\|4787020_4787935_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162358676.1\|4786050_4786881_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162358671.1\|4779939_4780755_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|366444
NZ_CP048209.1\|WP_162358679.1\|4789119_4790502_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP048209.1\|WP_162358681.1\|4792366_4794202_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP048209.1\|WP_162358673.1\|4782827_4783712_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162358672.1\|4782003_4782657_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|307807

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162358675.1\|4784626_4785943_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.57094e-55
NZ_CP048209.1\|WP_162358680.1\|4790751_4792374_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.55165e-45
NZ_CP048209.1\|WP_162360598.1\|4795967_4796717_+\|phytanoyl-CoA-dioxygenase-family-protein	gnl\|CDD\|368580	pfam05721, PhyH, Phytanoyl-CoA dioxygenase (PhyH). This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalyzing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterized by the accumulation of phytanic acid in plasma and tissues.	1.35182e-26
NZ_CP048209.1\|WP_162358670.1\|4777080_4779858_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	4.98962e-93
NZ_CP048209.1\|WP_162360597.1\|4780751_4781759_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	8.14721e-121
NZ_CP048209.1\|WP_162358674.1\|4783724_4784612_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.01733e-68
NZ_CP048209.1\|WP_162358682.1\|4794291_4795170_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	1.08392e-40
NZ_CP048209.1\|WP_162358683.1\|4799576_4800467_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.29113e-59
NZ_CP048209.1\|WP_162358678.1\|4787931_4788810_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.33465e-82
NZ_CP048209.1\|WP_162360599.1\|4798385_4799426_-\|hypothetical-protein	gnl\|CDD\|211420	cd11579, Glyco_tran_WbsX, Glycosyl hydrolase family 99-like domain of WbsX-like glycosyltransferases. Members of this domain family are found in proteins within O-antigen biosynthesis clusters in Gram negative bacteria, where they may function as glycosyl hydrolases and typically co-occur with glycosyltransferase domains. They bear resemblance to GH71 and the GH99 family of alpha-1,2-mannosidases and may share a similar cataltyic site and mechanism. The O-antigens are essential lipopolysaccharides in gram-negative bacteria's outer membrane and have been linked to pathogenicity.	5.21093e-107
NZ_CP048209.1\|WP_162358684.1\|4800483_4801431_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	6.62597e-113
NZ_CP048209.1\|WP_162358685.1\|4801528_4803265_-\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.67298e-111
NZ_CP048209.1\|WP_162358677.1\|4787020_4787935_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.16011e-73
NZ_CP048209.1\|WP_162358676.1\|4786050_4786881_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.89725e-24
NZ_CP048209.1\|WP_162358671.1\|4779939_4780755_-\|ABC-transporter-permease	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	3.01516e-21
NZ_CP048209.1\|WP_162358679.1\|4789119_4790502_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.2383e-72
NZ_CP048209.1\|WP_162358681.1\|4792366_4794202_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	2.58516e-61
NZ_CP048209.1\|WP_162358673.1\|4782827_4783712_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.36257e-73
NZ_CP048209.1\|WP_162358672.1\|4782003_4782657_-\|M48-family-metallopeptidase	gnl\|CDD\|307807	pfam01863, DUF45, Protein of unknown function DUF45. This protein has no known function. Members are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C-terminus being the most conserved region, containing three conserved histidines. This motif is similar to that found in Zinc proteases, suggesting that this family may also be proteases.	8.46129e-51

>NZ_CP048209.1|WP_162358678.1|4787931_4788810_-|sugar-ABC-transporter-permease
MRKNAAPYVFLAPTMLLFLCIFLFPIGYVIWTSMFRWNLMKPQAGRHFIGFDNFSGMLANDQFRASMLVTLKFVLLSAPAGIVLGLGLALLLNRPFRGKRPIQALMLTPMMIAPVAVYLSWKFLLEPTFGIVNYVLGWFGIEGPGWFSDAGTALFSVALVDIWSAVPFVFLVMYAALQAVPQDPVESAQVDGASRLRIFWHVTLPSIKPVLLVVLIIRIMDTIRIFDNIYVLTKGGPANATRTVQFLDYELAFNSFDIGKGSALALIIVAVILIVGSLLIREMNRTNEELRV
>NZ_CP048209.1|WP_162358677.1|4787020_4787935_-|carbohydrate-ABC-transporter-permease
MSGMTGQEQRMAGIGNGAERIGLRAAGRLRRGGNAAERTLFALLVALALIFLLLPIVWMIITAFKPNSEAMSLPPKLLFTPVLDNFKTVLSNPGFLGSFLNSAVIAVLTTLLTLFCSSTSSYALTRFRLVGANTLSTLILISRMIPAIVLGLPLYIIARTFGLLDTYFIMVIAITTFALPFQIWLLLGFFAQIPKALDESALIDGCSWYSAFLRVILPIAAPGLAATAIMTFLFSYNDFFFSLILTGKNIKTAPLAVMEYMGLRTFDWGAIMATGVLLAIPTLFIGIVFQRFMIQGMTAGAVKG
>NZ_CP048209.1|WP_162358676.1|4786050_4786881_-|AraC-family-transcriptional-regulator
MGHAAESLLTEQVHAADCGTIVYSPGGRYGPRYQTDFQLVLLHTGHLTVTIDGTSHPVTPGNVVLLKPGHWEYFEFAPDRETWHRWIAVDVPDTGAAELDAFPFMLPISPEINQLTDLMLAMKPGAAADSPRMKCLGLAALHQFSHEYQCEEPAAIAHASVVAAKRAIHERFAHDWSFNELAMQVNVTPEHLIRLFHAHENTTPIKYLWHYRVRQAVEMLAVTDGTAAEIAERCGFKSAIHFSKCLKQRTGKSPTEIRREAWRKKEESEPAKRDQF
>NZ_CP048209.1|WP_162358675.1|4784626_4785943_-|sugar-ABC-transporter-substrate-binding-protein
MKRGLGLLVAGSFLFYSVGCSTDAGNTAGNGSRSADKKTITIWTFADTHKQYYDEMKANYEKEHPDINIKIELLEFTALFDKYTVIAQSGGKGAPDLIDVEQGAFPRYIKGDVPFEPLNTYMEKDGLSEAIPKGRLDLYTVNDNIYGIEIAACVSALYYRKDLYDGAGIDVSKLATWDAFMEASKPLLGKNNFILSGTEKDEGVFEQLLRQEGGDMVTKDGKIGFDTPTGIEVLKRIKAWKDQGLMSKSSPEGPQAWEAYTKGQFIAAFGPDWWAGQLVQNAPDLSGKWAAVPMPLGGPESVPTTVNGGTGMALSKFSANKDAAWDFLKYTHLNTDNIVSSFRIINLFPALMSAAASPDLHKESPTTEYFGGQDIASLYADLGTKAPSQNQAWWRSLIGKAWDKYEPDYQNGKMTPEAFLGSVEKELQSLIDAEQARK
>NZ_CP048209.1|WP_162358674.1|4783724_4784612_-|sugar-ABC-transporter-permease
MMTNASTRWKLAPLLFISPFFIAYAVFGLYPILYGFWLSLMKGTDDYTFAGLSNYAFVLKDSFFWKAMWNGTKLALGSLFLILPVALGVSLLLNRPYIAKRKGFFATFFFTPNITSAVAVGIIFKLLLDRDNGVINQLLGVFGASPVGWLKDPNWTIPALVLLCGWKYLGINILFFLAGLQSVPYELIEAAKIDGATPVKRLWYVTIPLLRPIMTFIVFQCLLGSYGMFSEAFILAGSGFGPENSLVFPTSYLYDEAFRRQDFTYSSALGYVFTLLLLVIGFIQLRMFRLNHSEE
>NZ_CP048209.1|WP_162358673.1|4782827_4783712_-|carbohydrate-ABC-transporter-permease
MQKSAAAAADRFPAAQGYRIGWQGAGRLFAILVLIVLSLLFLTPFLFMIGTAFKRYEDIVGDPLNPVTLHPTLSNFSHLFEKLPFFALLANSLIIAVSVTVLAIVFNSLVAYGFARFEFKSKHALFMGMLATMMIPGQITLVPSFMMFRSFGWLDTFWPLILPGAVGAFGVFLIRQVMVAIPKEIFDSARIDGCSELGSFFRIALPLSGSAIGIVALLTFMGAWNDYLGPLIYLSSGSKMTLAVGLTTMNNPYKIDYASPITGALLMSLPVLVLLSIVGHKYFVDGITAGSIKG
>NZ_CP048209.1|WP_162358672.1|4782003_4782657_-|M48-family-metallopeptidase
MKIDYGDREIPFHVEYGPWGKLSVQVEANGFVTVKAPNGTSAEAVMRAVEKLAAKIAERLGAIEKAREAPGLREYQDQGRFLHLGRYCQLHELIGTEGLNEEELRLKLKKFYFASCKQVVLERIQPYQKLLKAKPKSIDIVESVTKWGSCSSAKALTFNYRLAMAPVEAIDYVIVHELCHLTHMNHDRSFWRRVGSVMPDYKEREAYLMRYGHAMTL
>NZ_CP048209.1|WP_162360597.1|4780751_4781759_-|ATP-binding-cassette-domain-containing-protein
MERGNSEWAVEANGLVKTFGDNRAVDGVNLKVRAGTIYGVLGPNGAGKTTTIRMLATLLRPDAGTGRIFGHDVVKESQIVRQLIGVTGQYASVDESLSATENLIIFSRLLGLGRAESKRKAAELLEEFGLTEAAKRPLKNFSGGMRRRLDLAASLIAQPPLIFLDEPTTGLDPRTRAQMWETIRRLVNTGSTVLLTTQYLDEADQLADRIAVIDRGQVVAEGTVDELKMSVGTSSLQLRVQQPEHSETARRMIEQVLGVPTSMTSEAGKITAPMTKADLITDLLIALRAEGIPLDEVSVQKPTLDEVFLTITGHGANEDAQAATAVSNAAKGAKQ
>NZ_CP048209.1|WP_162358671.1|4779939_4780755_-|ABC-transporter-permease
MRTTAMKPGAGVKLKNHTSFGQSVRHSLTMAYRGLLKIRRTPEQLFDVTLQPIIFTLMFTYIFGGAISGDVHSYLPVIIPGILVQTVITTSIVTGVQLREDMDKGVFDRFKSLPIARIAPLAGALLADTIRYTIATVLTFTMGYIMGYRPDGGLEHVALAAVLVIACAWAISWIFAFFGVIARTASSVQGISMLVLFPLTFLSNAFVPADTMPDWLQFFVKINPISHLVTAVRDLTNSGTAGWDLGISLIGAAVIVAIFAPITVRAYMRRT
>NZ_CP048209.1|WP_162358670.1|4777080_4779858_+|EAL-domain-containing-protein
MTYGYSLFLTGLSLLIALLVSYTALNSAKRFPPSNGRKQQFRLIGGAAATSLGIWSMHFIAMLAFRLSQGATYHFDSIGTVLFTILLSFIGTLSGFAAARPGRFKRYKLLGGGAFMGLAFGGMQAIGMSALQGVSVRYSPPLLTLSVMVAIIASITALYLLFHAHRSFWMNGLLLGIVLTGMSYSGMASATLTLHDDGMSMPMNGIHMDNFDLAIYVAFGTIVIFGISLIGSLAGDKRLAERLAWKGSILDSAIGCLIMFDRHGTVIEFNPAAESAFGFERGDVVGRRNIDQLIPRDSGANEQDRRKLAPGSEWLLGERLEATALRADGSELPIEMTVTRIKKERSFAYAVHIRDLTERIRAERVLRESEERYRRLIEYSPEAIFVQQDGLITFVNASVMQMLDFADSSELVGNPMISLIHEDYRAAARRWQERVQAGAQAPEAMELKMIKRCGRPIDIEAKSILFEFEGKPFVQTIARDITEKKQYEDAIKQMAYYDTLTGLPNRNLFHKLIEEALGHARQDGQRFAVMFLDIDRFKIINDTMGHPMGDLLLQRFAALLSVCIGNDGTVSRLSGDEFVVTLPCCDAAKAETLARGILLALTESISLGSENIYVTSSIGIALYPSDGDNAETLMKHADCAMYAAKTEKNGYRFFDRRMDRVHSRQAAIEQALHRAIGERRFSLRYQPMFDARTKMMTGVEAFLRWSDPMLGSVPPEEFIPIAEESGQMAAIGEWVLHAACEQMHAWHENGLARVPIFVNVSARQFHQEQLVPMLRRILQQTGLQPKYLALEAKEGVVLEESDAVFAKLGALKDLGVCLSIDDFGTGGSASPTRLQELPIRTIKIDMSILLEISKPPIKAAMETISAMGRSLPIEIIAKRVETEEQFLLLERLNCTNVQGCLFSQPLSAEQFEHAYLYALALDHQA
>NZ_CP048209.1|WP_162358679.1|4789119_4790502_-|sugar-ABC-transporter-substrate-binding-protein
MTIGTKKRLAAMMLSAVLLFVSACGNGGNGGNGGGNSGSDGNSGSANSAGGNGAANADSEGTNAGASAKDPVTLRILGSSGFTEDIVKSIAPGLEAKGIKLETEYYDWVTYDGKQKLAMTSQGGDYDLVFLPGNYTVLWANSKAALPMDDFFSKYGYDENDYYESVKSYGKVDGKWYMAPFSAEAMVYFYRKDLYDAAGLQPPKTMDDMYETAKKLTKDGVYGIAYPGGPDEGSSSFWSYFFWSHGGKYYDDAMKPLLNTPEAVQSAELFAKILKDAAPKGVATWQNEETVAAFNSGSVAATIMWPGYLSSFTDKTKSKIYDKFAVAPVPVGPSGKAVPRFGAWGIAVTSNVKNKDAAYEFIHEFTKPETMKEIAKQTSTASKSVNADPELRKLNPTLGASADVLDTAQERPSFAESAQINTQVGNAINSIVAGKPAQATLDALQKTVEGILKDAGYYDK
>NZ_CP048209.1|WP_162358680.1|4790751_4792374_-|response-regulator
MLKVLFVDDDILVRVGLRVLIDWAGAGWEIAGEAANGVQALEMIEAMKPDLLIMDMKMPQMDGADLLQRLRDRDRTLRIIVLSCYDDYAYMREALAAGADEYILKPELTGAALEAALCRIRAQIDEKEQRDKEYYQLKKQAALHTHIARDSFYRELLRGSYASREELGAAAAQYGIELPDREYAVLLFSAEKQRGVPELQGQQKRDAVENALFNIIQGLLQTLPASFMIRDADSGDYIAVAAGPAVGGLLQEAEHAANRAVQAVASYMRLKLTVGIGGTVRDPLQLHAKLVHAREALRCRLLREDRNVFVHAETKGDDGRLREELKQLQLRLQELFGALLGVDESHGEELLRSLVGDVCRSGSGRLLKAMCTELAGWHNRQLDYAVFEDSPVPEAEYVSADELLNSRTAPELARLFLERAARLREAGMAVPSAAAPPAIRRAIAYIQTHYERQITLADLSEHVGMSKSHLSLVFREQTGCNFVDYLTHYRIERAKRLLRSDSGRIYEIATMVGFENEKYFSQVFRGRVGVTPTEYKRMKQ
>NZ_CP048209.1|WP_162358681.1|4792366_4794202_-|sensor-histidine-kinase
MNRLRRLFLRSIQARLMMFIFVMIILPLLFLGFMTFRASSGIIERSVTLNTAETMDQVLDNIEFHLSGMESVATDIIFNYTINSNLRKMAGRFDEEEIQAVNEIKALLTKQLSVQDGIESVFLIGDAYFLVSSSNTNRASPQDHVPELMKRQDWYRATSERGGKSYFTIVPDQAKANDGADADKPGQENAAERNRPIRMARLFRDIQTGSPLGLLGVDMDYRVIDEIVSRLHSGYNSSLILIDEDGNTIYKRDPGHRFAAAASLAGESRLASGDDQVTVDGKRMLRIFRTSKLSGWRVVQLIPYSEILKPVLVIKRLTLLLVLICLAAALIMAAFLSSRLMKPLRNLVGLIKKVQHGDLDVRLDTIRNDEIGYLSKNFNMMTARLKEMHSEIYREQELKRKAELSALQAQIQPHFLYNTLDSIKWMAVIRGEQQISDMISALVNLLRNSVNLGNETIPLRKEIENLKHYIHIQQMRYCHSFEMAYLVAEEALEYGIPKLILQPLVENALFHGLEAMESSGLIALEVMLEDGHIVCRISDNGKGMDPGLLKDVMAGRILSRFSGISVKNVHERLQLHYGTQYGLEFRSAEGAGTTVIVRFPAALPKEGHRIA
>NZ_CP048209.1|WP_162358682.1|4794291_4795170_-|helix-turn-helix-domain-containing-protein
MKGGAWALNEHLFRFDTETESPEVGVLLADRFRRPYGFQGHRSRGTEDWLLVYTVHGSGSFRVHRDVHVCGLGDVVILSPGVPHHYAANEAGEWDILWTHFVPLPEWMPWLELPRNDERLICLHLRGDELRSRIEQTFLRLIRDSSMSAPVNRELAKLALAELLVLIHHHNGERERANVMDERISQVVRYLSEHLHRKHRLSDLAAMAGLSTSRFCHLVKEQTGDTLTVLLNKMRLAKAARLLELTSRRINEIAFDVGFESAYYFSRQFAGHFGVSPTAYRKRCWQRGSPSQ
>NZ_CP048209.1|WP_162354585.1|4795232_4795922_-|hypothetical-protein
MGSLRLGVTTVKAGALIASIALMEPPEPITLIELIEPMETLEPTVLIEPIVPMECIAPIKPTKPIISMESITPREPIVPLKPNAVISHFLIIALMLFEPIAYAYNELIAPFKPIISMESITPREPIVPLKPNAVISHFLIIALMLFEPIAYAYIELIAPFKPIISMESITPLEPTTPLKPNAVISHFLVIAPLEPFPTSPTIPIFPHLPTVTIFHNSTSFLIEVWSVIA
>NZ_CP048209.1|WP_162360598.1|4795967_4796717_+|phytanoyl-CoA-dioxygenase-family-protein
MVRGLFSGEDVRAIRDTFMAIQTRGKLPGYFEPASPEEANGDPLLLYPRILYPHRVLALARKYMLDPRVVNVLAELMEEEPLAAQSMFYFKPPGSRGQALHQDNYYLRVEPGTCIAAWTAIDACDQENGGLVVVPNTQRLDIQCPHEADPAVSFFRDEVDVPEGSVVVPANMQAGDVLFFNGSTIHGSYPNYSADRFRRSFICHYVGESTLRLGHHIHDDLHNRHGDIITVQRNESPGPCGVAFEGAPH
>NZ_CP048209.1|WP_162360599.1|4798385_4799426_-|hypothetical-protein
MFWPEGYGEWQSVKNAVKKYPEHNWPRKPLWGYVNEADPYVMEMQIDAAADHGVNVFIYDWYWYDKRPFLEQCLNNGYLKARNNDRVKFYLMWANHDVNHTWDIRLSHMQDTVIWEAAVDRPEFERIANRLIMEYFKHLSYYTIDGKPVFMIYDLANLMKGLGGAEATKEAFQWFRDRAVEEGLPGLHLQLTMWSERSFNLSGVDGGKAATTSEVVKLLGFDSMSHYQYVHFADIDRDYGDIMEDVIREWERIDRTYDIPYFPHVSIGWDNNPRFQEFRPGVVKNNTPANVKQALELAKAYADRHPGQPPLITVNSWNEWTETSYLQPDDLYGYGYLEAVKATFRE
>NZ_CP048209.1|WP_162358683.1|4799576_4800467_-|carbohydrate-ABC-transporter-permease
MHHRTLGGKIFESANYVFLVACALLCIFPIIHVLAVSFSSSTSAAAGEVTLWPVDMNLSSYKYALNSPQFLDSFLVTLKRVAIGLSVNMLLTVCAAYPLSKERSDLYGRSVYAWYLFITMIFSGGLIPWYMTIKQLGLMDSVWALVLPGAVPIFNVLILLNFFRQLPKEIGESAFMDGAGHWTILGRIYLPLSKPALATLVLFTCVGHWNSWFDGLILMSSPHHYPLQSYLQTIIVNRDMSLFTTATPEELKMLSQVSDRTLKSAQIFIAAAPILAIYPFLQKYFMKGIVMGSVKG
>NZ_CP048209.1|WP_162358684.1|4800483_4801431_-|sugar-ABC-transporter-permease
MANRQSVAPAGGAKRARAAAKLRQQLPMHLMLLPCIALVAVFSYYPMVGILIAFQNYNPTKGFFGSKFVGLDNFDYVYAMPETMHVLWNTIYIALLKIVFGLLVPVVFAILLDMIRRSFVKRTIQTLIYIPHFLSWVILSGILVDILSPADGIINFMLKGMGLEPIFFLANEKLFPYILVGTDVWKEFGYGTIIYLAAITSIDGTLYEAAVMDGASRFRQVLHVTVPGIMPIVVLMATLSLGNVLNAGFEQVFNLYSPVVYKTGDILDTFVYRIGLLNSQYGVATAVGLFKSVVSFLFIVTGYKLASKFAGYRIF
>NZ_CP048209.1|WP_162358685.1|4801528_4803265_-|extracellular-solute-binding-protein
MNKKHVKLLQLPVLTAAVLALSACGNNAASNNESAANTGNAANTQANQTAADNAGGATAANAGDSNGVYNPPITVTSVMGLSDQVQKAVAIQADVVTNNIWTRSYEKELGIKVNYLWTVPGAQMEQKMNVAISANDLPDIIPANARQFKMLVDSGVAMDITKLFDDNASDFTKQMMEADKHIGLDQATVGGKLMGLPQLNGAIDGASMIWIRADWLSNLGLQPPKTMDDVMKLAEAFTKNDPDKNGANDTFGLGLVKDLLGGFATLDGFFESYHGYANGWVDDGSGNLVFGGVQPQIKTALGKLAEMYKNGYIDQEFSVKDSAKVAESVTAGKVGMIFGQHYLPFYPLQDAKNKDPKADWQAFPIVSADGDPAKPMINGSASTFYVINKNMKNPEAAIKLYNYFYDKDPALSPNFDPAYHGKNGEQDTKPDQNFQLATMTSFYPQQNLFIHQSVNKFFKDNDQSATDNYWVKDNVEQIQQYKNGDNKLWSAYAWSGPDNSAFSVIDYYNTNNLFQQNGYIKADTESATQKGATLKQMRDETFTKIIMGKAPVDEFDSYVTKWKKLGGDDITKEVNAAK

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Crispr_ID: NZ_CP048209_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_19

5234537-5234610

Orphan

Consensus_repeat	Method
GCGGACAGGAGATCCGTTAATCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_19

>merge|NZ_CP048209|19|5234537-5234610|CRISPRCasFinder
GCGGACAGGAGATCCGTTAATCGCTGCTTAATCACGTGTTTTCGTGTTCCGGCGGACAGGAGATCCGTTATATC

>NZ_CP048209|19|16|5234537-5234610|CRISPRCasFinder
GCGGACAGGAGATCCGTTAATCG	CTGCTTAATCACGTGTTTTCGTGTTCCG
GCGGACAGGAGATCCGTTATATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162358986.1\|5226287_5226986_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180753
NZ_CP048209.1\|WP_162358984.1\|5225254_5225821_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143628
NZ_CP048209.1\|WP_162358994.1\|5237582_5238938_+\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP048209.1\|WP_162360633.1\|5230204_5231584_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP048209.1\|WP_162358983.1\|5224208_5225120_+\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|237663
NZ_CP048209.1\|WP_162360634.1\|5236767_5237448_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP048209.1\|WP_162358995.1\|5239106_5239700_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379324
NZ_CP048209.1\|WP_162358987.1\|5227192_5228278_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NZ_CP048209.1\|WP_162358999.1\|5244636_5245611_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP048209.1\|WP_162358989.1\|5231878_5233171_+\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|234757
NZ_CP048209.1\|WP_162358985.1\|5225853_5226261_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_CP048209.1\|WP_162358988.1\|5228382_5229999_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP048209.1\|WP_162360632.1\|5223650_5223893_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226895
NZ_CP048209.1\|WP_162358997.1\|5241923_5243582_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270300
NZ_CP048209.1\|WP_162358998.1\|5243718_5244612_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162358992.1\|5235121_5235913_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP048209.1\|WP_162358996.1\|5239788_5241852_-\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|269893
NZ_CP048209.1\|WP_162358993.1\|5236145_5236670_-\|5'-3'-deoxyribonucleotidase	unknown	unknown	gnl\|CDD\|226895
NZ_CP048209.1\|WP_162358990.1\|5233308_5234292_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702
NZ_CP048209.1\|WP_162358991.1\|5234873_5235104_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319947

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162358986.1\|5226287_5226986_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|180753	PRK06924, PRK06924, (S)-benzoin forming benzil reductase.	1.32677e-66
NZ_CP048209.1\|WP_162358984.1\|5225254_5225821_-\|hypothetical-protein	gnl\|CDD\|143628	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily. This subgroup contains class IV ACs and similar proteins. AC catalyzes the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. cAMP is a key signaling molecule which conveys a variety of signals in different cell types. In prokaryotes, cAMP is a catabolite derepression signal which triggers the expression of metabolic pathways including the lactose operon. Six non-homologous classes of ACs have been identified (I-VI). Class IV ACs are found in this group. In bacteria, the gene encoding Class IV AC has been designated cyaB and the protein as AC2. AC-IV occurs in addition to AC-I in bacterial pathogens such as Yersinia pestis (plague disease). The role of AC-IV is unknown but it has been speculated that it may be a factor in pathogenesis, perhaps providing cAMP for a secondary internal signaling function, or for secretion and uptake into host cells, where it may disrupt normal cellular processes. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.7829e-06
NZ_CP048209.1\|WP_162358994.1\|5237582_5238938_+\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	2.70739e-99
NZ_CP048209.1\|WP_162360633.1\|5230204_5231584_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	9.91738e-39
NZ_CP048209.1\|WP_162358983.1\|5224208_5225120_+\|J-domain-containing-protein	gnl\|CDD\|237663	PRK14293, PRK14293, molecular chaperone DnaJ.	1.15715e-05
NZ_CP048209.1\|WP_162360634.1\|5236767_5237448_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	2.47039e-13
NZ_CP048209.1\|WP_162358995.1\|5239106_5239700_+\|ATP-binding-protein	gnl\|CDD\|379324	pfam13671, AAA_33, AAA domain. This family of domains contain only a P-loop motif, that is characteristic of the AAA superfamily. Many of the proteins in this family are just short fragments so there is no Walker B motif.	1.66338e-09
NZ_CP048209.1\|WP_162358987.1\|5227192_5228278_-\|iron-siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	4.16963e-46
NZ_CP048209.1\|WP_162358999.1\|5244636_5245611_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.07759e-124
NZ_CP048209.1\|WP_162358989.1\|5231878_5233171_+\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|234757	PRK00421, murC, UDP-N-acetylmuramate--L-alanine ligase; Provisional.	0
NZ_CP048209.1\|WP_162358985.1\|5225853_5226261_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.12328e-09
NZ_CP048209.1\|WP_162358988.1\|5228382_5229999_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	8.82944e-26
NZ_CP048209.1\|WP_162360632.1\|5223650_5223893_-\|hypothetical-protein	gnl\|CDD\|226895	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism].	5.404e-15
NZ_CP048209.1\|WP_162358997.1\|5241923_5243582_-\|extracellular-solute-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	3.49545e-162
NZ_CP048209.1\|WP_162358998.1\|5243718_5244612_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.59284e-60
NZ_CP048209.1\|WP_162358992.1\|5235121_5235913_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	3.6423e-24
NZ_CP048209.1\|WP_162358996.1\|5239788_5241852_-\|alpha-galactosidase	gnl\|CDD\|269893	cd14792, GH27, glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	9.91362e-11
NZ_CP048209.1\|WP_162358993.1\|5236145_5236670_-\|5'-3'-deoxyribonucleotidase	gnl\|CDD\|226895	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism].	2.18409e-52
NZ_CP048209.1\|WP_162358990.1\|5233308_5234292_-\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	5.51508e-35
NZ_CP048209.1\|WP_162358991.1\|5234873_5235104_-\|hypothetical-protein	gnl\|CDD\|319947	cd08359, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	7.44973e-10

>NZ_CP048209.1|WP_162358990.1|5233308_5234292_-|phosphotransferase
MYTRPMALRSVLDPKYLEYSLSKQYEIGEWTECLYWLRGLNDTYRIRTSSGFYILRVYRLSISESDVAYELAVLTRLQDVLSSARTSVAEPISKKDNGLYTIVNAPEGQRIAVIFRYLTGTENMLHDDKSCFSFGRSAAELHAAMDQIALNQPRFNLDTNFLVTQPLERIVNYIGAHHHAAPFLREYANAMMERIDAAARQGLDWGICHGDMHGNNNAFQEGDSFTHYDFEWSALGWRAYDLAQVRGRKRQLEDKKESLWTALLSGYRSVRDFSVQDESAIELFMKARRLWVMGLEVTFIPNDLGVLDYSDDWLEGFINEFRSYGIV
>NZ_CP048209.1|WP_162358989.1|5231878_5233171_+|UDP-N-acetylmuramate--L-alanine-ligase
MGSFHFIGIKGSGMSALAQVLLDLNHHVQGEDIDAFVFTQAALESRSIPVYAFGDAPLAPNMTVIASNAFDDRHPSIIRCKQLGMTVHRYHRFLGELIKDYTSVAVTGSHGKTTTTGMIVHALDAENPPCSLIGDGTGKGNPSSDQFVFESCEYKRHFLAYKPNIAVITNIDYDHPDYFPDIDDVRNAFEEMASLTSGYIVACGDDEQVRMLKSGTEALYYGFELSNELRAARLSVDGESTFFDVDYKNTGIGRFSIPSFGKHNVLNALAAIGVALVLDRDLELVKSRLAAFTGVKRRFTEKAWGNNVIIDDYAHHPSEIRATLEAARSKYPGKKVVGIFQPHTYSRLEKLMDDFASSLRDADDIFLCPVFGSARENAGSVSIGDLRNRIPNAQLISDNITTDLNPYNDSILVFMGAGDIQKYQAQLLQS
>NZ_CP048209.1|WP_162360633.1|5230204_5231584_-|FAD-binding-oxidoreductase
MAHNRRKTGTRLTGRIVFPGNPTYNAARMEYNRRFSKFPKVIVFCQRTQDVINAVKWARERGVRMRVRSGRHSYEGFSAVNGGIIIDVSEMNKVKVDRKRMVALVQTGNPLARVYKKLWDKRVALPAGTAPDVGVAGLTLGGGIGLLSRKYGLTCDNLKQVKMVVASGRYGAKAIVANRRKHADLLWASRGGGGGSFGVATAYTFRVRPISKVSIYSVSWKFDDLAKVLPVWQRWAPSVTNRLTSTIEVAAKQVGAILSTGQLLGGARELRRLIQPLLRTGTPMKVMVKTVPFIEATRFFAESDLNLEPKFKITGAYGFQPLPRRGVRVIRDFLSKAPNKHASVWSQSLGGAGSAVSRVSPTATAYPHRKAETVYELSARWRNNGEQQRNIRWVSRFRQALRPFVHGDYVNFPDLQIKNWPKAYYSVNFGRLKQVKRKYDPHNVFRFAQSIPVGKQARK
>NZ_CP048209.1|WP_162358988.1|5228382_5229999_-|AraC-family-transcriptional-regulator
MSDNQNEMNRIGENLLDSLWFKLLRIEKVVFDGDEWKFERERIERHRLIVCADDTCRVVVDGVRIAVVPGSVVVCIPGQWIETGGPSKAEQTMYIVDYERGYWDRRTAETDPNGKAGCESGTREYRLASAVRMGETMHRYWERFDTAERMRAQAVFHELLAGIAEKRERPDADAPDLVKEAIDRRYGEELSIEELAELSGVNRYHLMRSFKERYGKSIIEYITEVRLLQAKRLMLESSLPIAEIAGRVGFRSEAYFRTVFKKEVEITPAVYLRNRRRKVAAYSWPVFGQLLPLNVIPHAAPIDHYWTDEFSRKYGGDVTVPLGHDYEFNRSALRRARPDCIIGLDSTISREEADRLGEIAPVLLLPWMKTDWRSHLRMVGDFLGMAEDAEMWLERYEWKAASVRERISRFVRDDKVLVLKVAGDELQIWGCKAMSVLYDDLGLAPAALAEGVDWYKPIELERLSECDAGRFVVSVNGDVRSQAFWEKLQADKNWRGLKQVREQAVHSLRGHSAWVHPWIEHSAFYQERLLDGAAHLFL
>NZ_CP048209.1|WP_162358987.1|5227192_5228278_-|iron-siderophore-ABC-transporter-substrate-binding-protein
MHRQSLNDRYSKKGPRQHRMNAALLLIAVLALALVLGGCTKNGGDNASSGTSAPDAEQAAQPAPADTEKEPAPVPVKIKHDYGETTVPAAPARIVSIGMEDMLLSLDVPLVQAFSTDGYYLDAQIKEKNIPINSSFDINFEAILAAKPDLIIMNTYMTDENGYEELSKIAPTIAFVRDNWQTGIVEIGKALGKEEQAQAVLQAYQDKVKQAKAAIVQAIGEDKTVAFIRPGTKQVELDFPEYAWTSALYNDLGLSPDPKVLEFKKNTTDDWGGTMLSLEKLPDLTADYLFMDYGASMAAETDFQKDVAASSEVEKLNVWKKIPAVEKGQAYKVSARHWALNGPIADGLKIDDVVQALTGTK
>NZ_CP048209.1|WP_162358986.1|5226287_5226986_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKYIIVTGASRGIGRALSEKLMSTGHHLFCISREINHDLLSLAASKNIPMDYFAADLMHVSELDDLMKRMIRQIDGAVAESIYLINNAAVVQPVDIISRSDPNEIIAHMNINLLAPMVLTSSFMKHTAPFKADKRVMNISSGLSFNLKPMLSCYSTSKAGLETFVKSIAVEQSDVKIMGVRPGATDTRMYEESVITDEHADKIKLAGTGYAADRILTFLFERFEHGKVVKGW
>NZ_CP048209.1|WP_162358985.1|5225853_5226261_-|VOC-family-protein
MLTSLEHVQIPVKQMDRAISWYTEQLGFRLSSRDGDRIAFLALPDGPLLMLWQTNDDLTYAQFTVNGTDFPVLLFRTTRIHELYSNLTRLGTPIQLYEDGGFAWVLKFYDTEGNLWGVLQFNPSDDKDKPAAEHA
>NZ_CP048209.1|WP_162358984.1|5225254_5225821_-|hypothetical-protein
MDERISFEKHDGIVKLNRAYKGLCKRLDEIERMLMGLGAVLQLSGVHQTDYLFRLPSQLSGEDTRRIKFRLVNGEPFGIYLYDRHSEGSDITFEFIRPADRTLVEALQRSGVPYVCISKIRTRLTFHNLYIHLDQVEGLGDIIEIEAINGESIPDVVMCALAPYLVGKLTGSNEDYFQAIEERKEQGC
>NZ_CP048209.1|WP_162358983.1|5224208_5225120_+|J-domain-containing-protein
MDERKKAYELLGLPEGASKEEVENRYFLLIRRERASRQRVEAEQIDEQPFNPEEINKAYKTILEYDEKKTMARYDAATYGKFKGMAGFAQKVDHFFNYYKLHMFVVIGLILAITFATMGFIDHRHKAAELAKLPPIDVSVSFFGDFTSMDGNKLDIDLKPTEADILSNFPQWKRVQVFFTYLNMEMDKQGDSEFLQRSTIDLAMNQPDVYIFDKASFARLASVGALLPLDGANASKLGPGLKPELELKSKTVEDPEEHVYGVDISASPLLEGLPLVGNAYIAGISAFPDRLDNAFMFVKKYLD
>NZ_CP048209.1|WP_162360632.1|5223650_5223893_-|hypothetical-protein
MTTETLAEHLRANPIAGDILYNYFCGNKSLIHADYLIDDSVRNIKPFKGHGLLFTNPYNKKAETELARVNSWEEVATNLL
>NZ_CP048209.1|WP_162358991.1|5234873_5235104_-|hypothetical-protein
MQGLAIAPNCGFHLVQIPDFEPINSYTPFNFVVKDADEVRERLGQLGVEVSELRKGEPRRFDLKDNNGNLISVIQL
>NZ_CP048209.1|WP_162358992.1|5235121_5235913_-|class-I-SAM-dependent-methyltransferase
MNEVAAYYDRIDEDSRFSKNSRKIEFLTTKHILDKLIPQHAKLLDVGAGTGVYSLHYAERQHEVVAVDITPKHIELLKEKSLQQGLDVEAYVDNATDLNRFGSDTFDCVLCLGPMYHLTDQGDRHRCIDECLRVLKRGGYLAVAYINKYSILPMLATREKSYIRNSVIDKVLDEGVIFARDEDCFWTEAYFTSPDEIEAFLGQYDVTPVEHAGTDGISHTISKFVDQLDEHEFQAWMSYHLRTCRERSILGMSSHGLYICRKN
>NZ_CP048209.1|WP_162358993.1|5236145_5236670_-|5'-3'-deoxyribonucleotidase
MQRIAIDMDEVIADFIPKHLHVFNRDYNENLTVNDLTGTRLRELRPQFLREINAYVDDPLFFRDLAVMQDSQEVMQQLSERFEIFITTAAMEVPASFTAKYEWLKEHFPFLDEMNFVFCGDKSIIHADYLIDDHARHFERFKGKGILFTAPHNLNETGYVRVNNWLDVRDYFLR
>NZ_CP048209.1|WP_162360634.1|5236767_5237448_-|TetR/AcrR-family-transcriptional-regulator
MKKQQPQISEDKILEASWELLREEGIEKFSMRRLADRLGIQAPSLYWYFKSKQSLYQRLANQVSKMILEEFRSEGDWKEQLTALAVTQRSVLSRYPCSTQLMMMTLPHEPDIIRFTNRMLLCVESTPLTQEQKLQVVNTLVNYVFYFVLDHYQHERNVTAILEDQEVDLGVDLIRLLDDMSETEAGLFRRMFKNGLFQVMGSDASFEFGLKLILLGIEQVIKEHEK
>NZ_CP048209.1|WP_162358994.1|5237582_5238938_+|MATE-family-efflux-transporter
MEAENLHYFEKAPVAKAVAHFAVPMMLGMSMSVIYSILNAYFLGTLGNTAMLTALALTLPLFAAIMALGNLIGVGSSAFISRLLGEKRYDVVKHASSFAFYSSLALGLIVMAAGLPLIDSIVHGLGATPDSFGYTKDYVTVMLIGSPVVVLFFTLENIVRSEGAAMTSMIGMIMSVVVNIILDALVIFVFHWDVIGVASATVIANLVASVYYVFHMGAKSQFLTVSFKWFKANKEILGNVFKIGVPVFIMSLFLGAMSLIFNRYLVEYGEQAVAAFGISSRLLQFPEVILMGLCEGVVPLIAFSFTANKLRMKHTISFTIKAILTLAVVFGVIVYLVSDHLIGLFTNDPQLIEMGSYILHVTFLSLFITGMTTLFTGIFQATAQGTAAFIMSVIQGITLIPVLYLANRMNGFHGVVWSLVIADTVAFLVGATLLYALRNKLQPADLEQLAH
>NZ_CP048209.1|WP_162358995.1|5239106_5239700_+|ATP-binding-protein
MRKLILFIGPAGAGKTTLAEAWVRRRGGAYLDMDTLLRPAAAALMTLAGQDPEDRDSPFYKEHCRDLGYRITMDAALQQLALGQDAVAVGPFTRETEDPAWLARELGRIGASTDDVCVKVIAVYLPAEADYLARLQARGSSLDAWKLDNWAHFRTTLRRRTIAWPLPPESVLAFDNSGPYTEAKRSEMERFILAGMS
>NZ_CP048209.1|WP_162358996.1|5239788_5241852_-|alpha-galactosidase
MTIARTEQERFAAIDNGQVRVEVDLANGSASIAWLDEAAVQGIESRIRLDGRLLTTREARERSYRIADASGVFGAGAELTVQHRMDDRLEIMQRFTVHEGMRACLVQAEARRSDGEAIASNYIAPIYCADEAGALRLEAESGDSEQDPLLALFVPFDNDKWVRYESVAMPGRTESYEASAVYRDGSRRGLVFGSVAHDTWKTGIVIDSEAGQAVQRLEIYGGAASEYTRDTIPHGIVSGTVLSSPVIWLGAFGDYRDGLLAFGEANARIEPPLAWEGTVPFGWNSWSAVGAELSFDSYVRASDLIHEVQQQGFHDQGVVYLNFDSFWTNLTAEERRQAVVHVNRNGQKAGTYWTPFAYWGKSEEAGNRIVEGTDGLYTYADLLLRDGEGQVLPDLDGGLAIDPTHPGCLMRVEWTLRNFVEEGYEYVKLDFMAHGTLEGKHHRPDIQTGIQAYRFGMAHICGLLDPARIGRKFFIHLSIAPLFPHPYAHGRRISCDAFGELKDTEYMLNSLTYGWWIHDTLYRFNDPDHTVLYKSYNHEPTTEHEGRSRLNASLIAGTLLLMGDDFREEEACRRARAWLTEPALLAIARKGGTFLPLAGNTGQRAADVFYRMDRSEEGEDIVHVAVFNYDGELAAGKSVDLERLGLPAGAAYRCEELWTKKVRDVSGRVELQLAPAESVMLRLERLA
>NZ_CP048209.1|WP_162358997.1|5241923_5243582_-|extracellular-solute-binding-protein
MPGIKKWGALSLSLALVAAIAAGCGSSGNNGNNANQASNASKPGNAGAANDAGSKPDESLKPLKITFFDKNTGDAFTNDVAQEITKRTGVTVEIQQPTGNPTEKLNLMLASDDLPDIVLMDRGGDIVNKYISTGALIPLDDLIDKYGPDVKAMYGDTLNKTRYTDGKNYYLSNWYGMSEGEPVFGFNLKMNFLKELAPDKAAGGQPFTADEFEQLLKDFKAKYPTVNGKPTTALTMDGSNMGAVTGTFKGMFGMKTYYETDGKLQYDVEDPKYKEMILYMNKLYTEGLIDTDWAINKKESWLQKLSSGTVFGSTGAYWDLGTANTALKKDGGEDAEFFDYKVVGPDVDPAKTTYGPQGSLGWDAIGITKANKNPERTMQFINFLASEEGQYLLQWGVEGKHWDMVDGKHVPKPEVLQGFKDDWNNYSKTTGIRKWTWFIKAGKGSDGTVYDLAGRYDRSEIDKMAIKNLGDSVWNTDTYDNLGPQGGTPEALISQKVNDIMTQNITKAIIAKNAAEAGQVFDKMLADMKAAGSEKIEKIINDNYQDRLALWK
>NZ_CP048209.1|WP_162358998.1|5243718_5244612_-|carbohydrate-ABC-transporter-permease
MTASKSYSDRLYMAGVYVFLAFVFVITFYPFWNILVLSVNSADDTVRGGIYLWPRVISIDSYKQILQDAEILNGLKVTVLRTLVGTPLALAVISLLAFALSKRDLVGSRIISLFFIFTMYFGGGLIPYYMILKNVHLIDSFMVYIFPNMMNVFFVIIVRTFMQELPIEVEESAKMDGANDIQIYWRIILPICVPVLVTIGLFTAINHWNSWFDSYVFTYKPNLKTLQAVLVKILNQYQTESFTSSANQMANSAKRNAVSSDTIRMAATMVATLPIIVVYPFLQRYFVKGMTLGAVKS
>NZ_CP048209.1|WP_162358999.1|5244636_5245611_-|sugar-ABC-transporter-permease
MEAHLDKRQFPAIGGAARSRKWRKMKQQKYLYLMILPALICTIIFSYGPMFGLYMAFINYSPGGGSFFHQFFHSKFVGFQWFDYFFTNGDFYMIMRNTLAQSLLSLLIGFPAPIVLAIMINEVGRGMFKRIVQTVSYLPHFVSWVIAANIIVTVLSSGGVINQLLQSLHLVDKPVTFLQNGHMFWWIIAFSNTWKDMGFNAIIYLAAIAGINPELYEAARVDGANRWRQMWNVTLPSLKPTIVILSILAVGNVLNAGFDQQYLLQNTTVLQYSDVIDTYTYRYGLQNGMFSYGAAVGLFKSVIAFILVVLVNGWSKKVNQQSLY

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Crispr_ID: NZ_CP048209_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_20

5298746-5298864

Orphan

Consensus_repeat	Method
GGCGTTCGTGCAGGTGGATACGCCCATTCCGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_20

>merge|NZ_CP048209|20|5298746-5298864|CRISPRCasFinder
GGCGTTCGTGCAGGTGGATACGCCCATTCCGGCGGTGCTTGTCCCGGGGCCGGGCGTTTGTCCGGCGGCGCAAGCCCGTCAAGCGGCGTTCGTGCAGGTGGATACGCCCGTTCCGGCGG

>NZ_CP048209|20|17|5298746-5298864|CRISPRCasFinder
GGCGTTCGTGCAGGTGGATACGCCCATTCCGGCGG	TGCTTGTCCCGGGGCCGGGCGTTTGTCCGGCGGCGCAAGCCCGTCAAGC
GGCGTTCGTGCAGGTGGATACGCCCGTTCCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162360639.1\|5302072_5302861_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359042.1\|5299622_5299961_-\|restriction-endonuclease-subunit-S	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359033.1\|5291278_5292817_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|223515
NZ_CP048209.1\|WP_162360637.1\|5295593_5295800_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|372943
NZ_CP048209.1\|WP_162359044.1\|5303295_5304075_-\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|133019
NZ_CP048209.1\|WP_162359038.1\|5298063_5298648_+\|permease	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360638.1\|5300699_5302019_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133029
NZ_CP048209.1\|WP_162359031.1\|5289158_5290142_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|367154
NZ_CP048209.1\|WP_162359032.1\|5290131_5291229_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|340819
NZ_CP048209.1\|WP_162359040.1\|5299003_5299294_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235562
NZ_CP048209.1\|WP_162359030.1\|5288328_5289162_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187564
NZ_CP048209.1\|WP_162359046.1\|5304790_5305978_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP048209.1\|WP_162359041.1\|5299275_5299623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359037.1\|5296714_5297752_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|225213
NZ_CP048209.1\|WP_162359034.1\|5293005_5294142_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP048209.1\|WP_162359035.1\|5294192_5295428_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP048209.1\|WP_162359036.1\|5296006_5296513_+\|DNA-topology-modulation-protein-FlaR	unknown	unknown	gnl\|CDD\|168472
NZ_CP048209.1\|WP_162359045.1\|5304044_5304794_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133029
NZ_CP048209.1\|WP_162359043.1\|5299985_5300273_-\|nucleoside-diphosphate-sugar-epimerase	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360640.1\|5305982_5306828_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133022

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162359030.1\|5288328_5289162_-\|SDR-family-oxidoreductase	gnl\|CDD\|187564	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs. dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	7.46263e-73
NZ_CP048209.1\|WP_162360637.1\|5295593_5295800_+\|cold-shock-protein	gnl\|CDD\|372943	pfam14169, YdjO, Cold-inducible protein YdjO. This family includes the B. subtilis YdjO protein, which is functionally uncharacterized. This is not a homolog of E. coli YdjO. B. subtilis YdjO is cold-inducible. Its expression is induced by the extracytoplasmic function sigma factor sigma-W. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	6.12077e-28
NZ_CP048209.1\|WP_162359044.1\|5303295_5304075_-\|NTP-transferase-domain-containing-protein	gnl\|CDD\|133019	cd02538, G1P_TT_short, G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase. This family is the short form of glucose-1-phosphate thymidylyltransferase. Glucose-1-phosphate thymidylyltransferase catalyses the formation of dTDP-glucose, from dTTP and glucose 1-phosphate. It is the first enzyme in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme.There are two forms of Glucose-1-phosphate thymidylyltransferase in bacteria and archeae; short form and long form. The homotetrameric, feedback inhibited short form is found in numerous bacterial species that produce dTDP-L-rhamnose. The long form, which has an extra 50 amino acids c-terminal, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced.	6.14322e-109
NZ_CP048209.1\|WP_162360638.1\|5300699_5302019_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.56897e-50
NZ_CP048209.1\|WP_162359031.1\|5289158_5290142_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|367154	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein, mannosyl-transferase, and several putative epimerases (e.g. WbiI).	6.20082e-123
NZ_CP048209.1\|WP_162359032.1\|5290131_5291229_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.17032e-117
NZ_CP048209.1\|WP_162359040.1\|5299003_5299294_-\|hypothetical-protein	gnl\|CDD\|235562	PRK05687, fliH, flagellar assembly protein FliH.	0.0030867
NZ_CP048209.1\|WP_162359033.1\|5291278_5292817_-\|glycosyltransferase	gnl\|CDD\|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	3.09955e-25
NZ_CP048209.1\|WP_162359046.1\|5304790_5305978_-\|hypothetical-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	0.00165565
NZ_CP048209.1\|WP_162359037.1\|5296714_5297752_+\|phosphotransferase	gnl\|CDD\|225213	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only].	1.37859e-39
NZ_CP048209.1\|WP_162359034.1\|5293005_5294142_-\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	1.43265e-34
NZ_CP048209.1\|WP_162359035.1\|5294192_5295428_-\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	3.00308e-27
NZ_CP048209.1\|WP_162359036.1\|5296006_5296513_+\|DNA-topology-modulation-protein-FlaR	gnl\|CDD\|168472	PRK06217, PRK06217, hypothetical protein; Validated.	6.49408e-22
NZ_CP048209.1\|WP_162359045.1\|5304044_5304794_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.88944e-43
NZ_CP048209.1\|WP_162360640.1\|5305982_5306828_-\|glycosyltransferase	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	5.82791e-20

>NZ_CP048209.1|WP_162359038.1|5298063_5298648_+|permease
MFAGHFGLAAAVKAADKRTPVWTLMLGTQLLDVLFVPFLLTGQETIESAEDGVGGYGGSLIHADYTHSLAGALIIALLAAWAGRRFWGRRSGAIIGLVVFSHWLLDLLVHRPDLPILPGNLGDLPLLGFGLWAHPAISAALEAALIAGGFLLYGRSVLASSKAAGGAAGTVSAYLAAAVMGLLLLGSLLSDMMG
>NZ_CP048209.1|WP_162359037.1|5296714_5297752_+|phosphotransferase
MLISPLSPETLQSAMRLYHHDSADGQAAFIGGSQNLVYAYAHGGRDYILRLTPCANRSESLVRSELDWIVYLASNEIPVSAPIPAINGGWTEVIRTAQGDYVCVSFEKAPGRQVHYPECLQDNSLYERLGRLTGKLHALARTYSPPKHAVRRHDWQRNWFLRHLDLLPASQTVVRESCLELFESIRALPTASQAYGIIHGDIGVGNFTVDERGTVTLFDFDEAQYSWFVEDIAIQLYYLVYVFGDADDGMALREEQAGRFMAHFMKGYRLEHDLDAYWLRRIPLFLRLRELIVYVGSFRDWDGDETFSGSGNPWLIDWIAESRRRIENRVPIVDIWTDRTDFMDK
>NZ_CP048209.1|WP_162359036.1|5296006_5296513_+|DNA-topology-modulation-protein-FlaR
MVAIRIHIIGGSGSGKSYCAALLGEKLGIAHYDLDDIHWDPRSDEYGVKAPEAERDRRLLDIVGRDAWIVEGVYRSWAEPSFAASDRIIVLMTPLHVQEERIWKRYEERVSGAVPGKKRETYEGIVNLLAWNRDYNETKLPHLLRNWAYADKMLLVHDNRDVLGLFEP
>NZ_CP048209.1|WP_162360637.1|5295593_5295800_+|cold-shock-protein
MHFSKKQAEPIPEEDTPIWTCTNDSCTCWMRSDFSFGEHPSCPICHSSMTSDIKSLPVLTNGTKRGFQ
>NZ_CP048209.1|WP_162359035.1|5294192_5295428_-|glycosyltransferase
MGAGRAGVRSPWGVISQFCFPRGQVTKSLACHSHINGDRRNDDSRGGTVQTKGQTNAKASAAGFASGYENGLRDGACEYLYRHLQPAAPPRKDCRILYIPQGFEGIDQGVIEALRLTVRDVYVADPARMAEQAALIRPDWVLVLNGLHVFPANHLEQVDAVRSLGIRTAIWFADDPYVTADTMYIAPRYDVVLTHELSTIPMYRERGCAEVIYMPLAVDHGRFKPMTVEERYRSDVCFIGQAFWNRVEMFDALAPFLKNRKVFIAGGLWDRMKHYKTMQRFIRLGWLPVDESIKYYNGARIVINLHRTTEVGQDNKNVLNLPGRSINPRTYEISACGTLQLTDCREDLPNYYTPGSDIETYADAGELRSKLEHYLSHEDDRRTIALRGLKRTLTEHTYVRRLQQIAEVLQW
>NZ_CP048209.1|WP_162359034.1|5293005_5294142_-|glycosyltransferase
MKPTRIRRGRRGRAVRDAGVNRGRTAGFRLGWEHGHWFGRCEAALQAVAPPSPPMKQVHVLFVATGKGFPYSPLDVAIADALRGQVGQLTITDTKQPVAELALRIRPDIVLVLDGLEFNVGQIDAIRAAGIRTAIWFTDDPYYTDITSKLAPHYDVVFTLELVCVEYYRNLGCRDVHYMPLGADPASFRPRNPERSQRHEICFIGSAYWKRAEFFDQVTPYLASKDTHISGIWWERLKQFHLLSKKIELGRWMGPVETAAMYNGAKIVINMHRAHDDDTFNNNTAGIPAVSPNPRTFEISGCATLQLTDVRNDLASFYTPGYDIVTYSSPQEMIEKIDYYLSHEEERQAIAMRGMLRTMRDHTYGRRIEQMLGLLFPV
>NZ_CP048209.1|WP_162359033.1|5291278_5292817_-|glycosyltransferase
MKQTKPKMLIFSHICSPQYVTGAEKLLLFMVRELLPMFACTLIVPREGVIAGNARKLGIPVIVLDIPLVVPLYLALPHMHDEIAEKQRESSWPELLLLLSREQPSCILVNTCVHPLPAMAANALGIPVIWSAMEALRETPYQSLAVSVIEQYADFIVGISEATLAPLRTPGLIPKTSLIPPSWYQQELQPDSWPQHRANRRSHLGIQEQERLVGYISSSIFEAKGLEHFMQMAVRVALLHPKAKFLIVGNPVDEPYFERCLDIARGPGLMDRFRWLRFEEQVATVYPAMDLLVVPSLAAEGFGMTALEGMAFGKATVVYGSGGLAEIGRATGNENYVAPTGDVEGLIVRVSSLLNDEQALQAVGARNARQAQAVFGIAAYRDRLRKFADMVKAQGHRRAKVFKGSGPAVYMPDRGALRPFRTMEALAGAGCRPEDISSVPDAFLAAWPVGEPIGEEGSAPRQARRRRGRLRSGIRRGKRRRGGKGRRARSIRSVGSGGRRAAGGRKRRRKTS
>NZ_CP048209.1|WP_162359032.1|5290131_5291229_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MRVVTILGTRPEIIRLSLIIQKLDALAEKHVLVHTGQNFSPSLSDVFFRELGLRQPDVLLKGAKQTLGGQLSVMFAETERVLTAHQPDVVLLLGDTNSALCAIIAERMGIPVVHMEAGNRCYDLSVPEEKNRRIIDAVSTINMPYTSYSKGNLLREGFPSNRIVQTGNPIHEVIAHYKPQIDASGVLERFGLEAGGYVLVTAHRAENVDVPERLTGILEGLNRVARRFGKRVICSVHPRTRSRIDGGSVQVAMDPRVEFYEPMGFFDFVRLEQHALLAITDSGTVQEECCLFGVPTVTIRQTTERPETIDCGSNVVCGLNAVRIEEAAAVMTALPAAWECPEGYLAKDVSDKVVKFVLGGKWNVY
>NZ_CP048209.1|WP_162359031.1|5289158_5290142_-|polysaccharide-biosynthesis-protein
MFTNQRILVTGGTGSWGYELIRQLLPQQPKQIIVFSRNESSQVAMSRSFEDPRLSFCIGDIRDKEALMRACERVDYVFHLAALKHVPVCEDQPYEALKTNVIGTQNVIEAAIANGVKRVIYISTDKAANPSNFYGMTKAIGEKLIVYANLLNSNTKFVCVRGGNVLGTNGSVVHLFMNQIKTKKQVRITDMHMTRFFLTLQDAITLLFKASEESVGGEIFVMTMPTCRIIDLAAVLMEDMGIDAEMVETGIRPGEKIHEILLTEHESTTTVAYDDEYLVILPTLDIPGLRMHYSAYPKVDFDSYCSSELLMTKDEIRAMLVRGGFLS
>NZ_CP048209.1|WP_162359030.1|5288328_5289162_-|SDR-family-oxidoreductase
MKLLIIGGNGMAGHMLIRYFREAHSGHEVVYTTRRTDGQGSLPLDASDADAVLELVQEVRPDVIVNAAGVLNQDAESYPLSAYKVNGFLPHWLRYAADTVGARVIHISSDCVFSGARGAYTESDEPDGTSVYARSKALGEMQYGKHLTIRTSIIGPEIRPNGIGLLKWFLAQSGTVKGYAKVYWNGVTTLELAKATAFAIDNPRIGGLVHLTASESVSKHTLLLLFEAAFEVEGVRIVPDNEIEIDRTLVSTRRDWKYKTTGYIPMLDELAQWMKRA
>NZ_CP048209.1|WP_162359040.1|5299003_5299294_-|hypothetical-protein
MVAAAVKANQRRKAAGSKRRSSAKPRQQGKRTKSSRGSRTSRGSNALQRRKQRTRRTQGNAGYNQAFDAAYNQGYNLGFAKGFEDGHQIAYEQQNG
>NZ_CP048209.1|WP_162359041.1|5299275_5299623_-|hypothetical-protein
MDRNRLEREARIALLGALSRSQTAVARILESVGDMARIDPGLAMSIRRNLKSLAAMQHSLNGMVRAMERRPAQRRTGKPTVNPAAKPWLSRQVNGGLRRSAAGVQRRKPKWSQRP
>NZ_CP048209.1|WP_162359042.1|5299622_5299961_-|restriction-endonuclease-subunit-S
MSRETAYVKMLDASAKLQWNLAMILEAKALEAEKVRSWMINHVTPDAFADQQEHLKATLKVHDQMVEVIDGLTKLNMGLTSVLKAVLNHQENDSGGGFEGMLGGSFDMGDKG
>NZ_CP048209.1|WP_162359043.1|5299985_5300273_-|nucleoside-diphosphate-sugar-epimerase
MQHIVTEMIEHMSHSHEQLSRILEGKRHVAVRMAQLVHALPDQHPGFGGFEDLMDNSRAVTGSVVAYLNSIAELQESLAVTLAAVMKEFAVEDEE
>NZ_CP048209.1|WP_162360638.1|5300699_5302019_-|glycosyltransferase-family-2-protein
MRSRRVKPLRPRLRRRRQSRPIRAGGGFDAGLAAGHQEGVRAGMESFGLHFEGTSIIIPSYNQLDYLKKCLASIGEYTPSPYEIIVVDNASTDGTADYLRTVGGVVRYRILERNRGFAGATNVGLMMAKGTTLLLLNNDTIVTPRWLDNMLACLNSDPGIGMVGPVTNYISGDQRIEVPYTDEAGILPFAKRFNYSDPAKWQRTDRLPGFCLLFRRELWERTGYLDEGYEIGNFEDDDFNIRVRLQGYALVIARDTFIHHFGSVSMKALGSQLPEVNAHNEHVYMDKWGNPHDLIHAVRSRGGGEPAQGETSFYPQGVVVRGVTETRYWIEGGARRPIAGVTRLPALRLSQIDIRRWPAGEPIAAAEVEAAWHAQPRIWEADGAIYMAESGVRRRLSSVKAAEAWGLQLRQGAPMTADQIGRLGEGLPVIAPARVAEHL
>NZ_CP048209.1|WP_162360639.1|5302072_5302861_-|hypothetical-protein
MYEGGELLLEQAIPSHLLLPEIGLREIIAMGTEQIRHLCQPLMDAHQVFAEMEAAIAEQRPCSVVRLGDGELLTLAQGGVYDDATIQREGGFLPYAGVHPPDTGARDHLADAVRQAHIVGVPQSRRKHFQPLLHPVLRSHRLAPASLRMTSSAVNYSLHQAGLLNRLLADKRLLVIGNAAPALAHVFGQHGFHVTGMISPVRGVDDVERVMNEVRGFDFNLAIVSAGIAAVILCVRIAHELGKTALDFGHMADGIIRGKYTL
>NZ_CP048209.1|WP_162359044.1|5303295_5304075_-|NTP-transferase-domain-containing-protein
MAGRSCEFHVTSNRWEVIELKAVILAGGTGTRLRPLTKLLNKHLLPVGKMPMISYGLISLQAAGITDILLVTGPDALGDFASFLGSGKEYNVSLTYRVQEEAGGIAQALELARPFIGGDDKFIVLLGDNLFEEPLKPHMDAFRAQPGGAMVLLKQVPDPERYGVPAFGADGRIERIDEKPAAPQTNSCVTGIYMYDGTVFDLIAEQSPSQRGELEITDVNNGYAAKGQLAYRHLSGWWTDAGTFGSLLEASRKLMGDGS
>NZ_CP048209.1|WP_162359045.1|5304044_5304794_-|glycosyltransferase-family-2-protein
MNGVTSIIIPTYNGLPLLQNAVAAIRLYTDPVQTPYEIIVVDNGSEDGTAAWCVREGVTCVSSAYNAGFPKACNKGMRAANGDYFLLLNNDVTVSFGWLRGLRQALDGSAGVGIVGPVTNYASGRQQVEHSFGSMADFHRAAADVFAHEAQSWEPILRLVGFCMLFPRALYERIGELDERFSPGHYEDDDYCFRARMHGYGLLMCRNVFVHHQGSASFKQRSAHEVSQLVERNRALFIAKWQVDPANFM
>NZ_CP048209.1|WP_162359046.1|5304790_5305978_-|hypothetical-protein
MHSTRRGGGSRGKGRSRNSRGGIGSGARAVIGRGARAGARRGRSRTGAGNGGSAMPAAAAFPRPPGRSGHEAPLKGDYAAGFAAAALHRSGAELAGREARLRMNEHWTQRFMNGGRGQRSGNPMKRGRAFADGFAAGLHRPGGNWVPVALTRTASAVVVVGPGAGTEALLQLLRLPLEEIVVVLDGAGEADFTRIRALPDITIVHSPVRIGPDVGLAVGARMAASDLVLFADAYVPVAAEQLAAMLAKAQAGSELVLADVSGQLGAFRNWDDPARIRAFMNWSLGRPDLSANSAAVLPHVWSRPAMERIGLRLLAVPPMAHRAALEQRLRIRCSPVASAKPAGWKTGGGTAPEAPERLSAGDHIEALRAAMREKGARLALPDEVRRRSAAGGGVP
>NZ_CP048209.1|WP_162360640.1|5305982_5306828_-|glycosyltransferase
MPPFPPSPFPLTPSQPPQPLQLPVTPQPQPQGTAESRGEPLVSVIIPVMNERRTIGRVVREAKRVHPSTEVIVVANGSKDGSAAIARSSGARVIVYDEPLGHDVGRGVGANAARGQALLFIDGDMVIPAAQLRPFVQSVLQGETDVALNDYSGPTDKHAVHSVVLAKHALNALLGRPDLKGTSMTAVPHAISRRALETIGAEALSVPPLAHARAVRLGCKVSAVKHINVGKLNLLRKKRERTNPLERLIVGDHLEAIDWMARHSDERGGYGDAERKRYFAR

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Crispr_ID: NZ_CP048209_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_21

5452141-5452215

Orphan

Consensus_repeat	Method
TTCCTTCGGGAAGGATTTTCGGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_21

>merge|NZ_CP048209|21|5452141-5452215|CRISPRCasFinder
TTCCTTCGGGAAGGATTTTCGGGGGAATCGCCCGTTACCGAGGCGAAAAGATTCCTTCGGGAAGGAATTTCGGGG

>NZ_CP048209|21|18|5452141-5452215|CRISPRCasFinder
TTCCTTCGGGAAGGATTTTCGGGG	GAATCGCCCGTTACCGAGGCGAAAAGA
TTCCTTCGGGAAGGAATTTCGGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162359150.1\|5454375_5454861_-\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NZ_CP048209.1\|WP_162359152.1\|5457162_5457609_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048209.1\|WP_162359157.1\|5461161_5462400_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133060
NZ_CP048209.1\|WP_162359146.1\|5449261_5449753_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359143.1\|5445541_5446090_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|239313
NZ_CP048209.1\|WP_162359151.1\|5454857_5456603_-\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|272915
NZ_CP048209.1\|WP_162359140.1\|5442073_5443963_-\|anti-sigma-factor-domain-containing-protein	unknown	unknown	gnl\|CDD\|378948
NZ_CP048209.1\|WP_162359153.1\|5457612_5457993_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360654.1\|5460188_5460683_-\|translation-initiation-factor-IF-3	unknown	unknown	gnl\|CDD\|234582
NZ_CP048209.1\|WP_162359156.1\|5459955_5460159_-\|50S-ribosomal-protein-L35	unknown	unknown	gnl\|CDD\|234676
NZ_CP048209.1\|WP_162359141.1\|5443959_5444784_-\|RNA-polymerase-sigma-factor-SigI	unknown	unknown	gnl\|CDD\|236233
NZ_CP048209.1\|WP_162359154.1\|5458263_5459358_-\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|223085
NZ_CP048209.1\|WP_162359142.1\|5444917_5445343_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359149.1\|5453149_5454142_-\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP048209.1\|WP_162359148.1\|5450482_5451847_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP048209.1\|WP_162359139.1\|5441462_5441861_-\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|340411
NZ_CP048209.1\|WP_162359147.1\|5449802_5450471_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP048209.1\|WP_162359155.1\|5459558_5459918_-\|50S-ribosomal-protein-L20	unknown	unknown	gnl\|CDD\|179959
NZ_CP048209.1\|WP_162359144.1\|5446223_5447303_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_CP048209.1\|WP_162359145.1\|5447485_5449213_-\|DUF2339-domain-containing-protein	unknown	unknown	gnl\|CDD\|378390

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162359150.1\|5454375_5454861_-\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	4.64839e-84
NZ_CP048209.1\|WP_162359152.1\|5457162_5457609_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	6.30481e-17
NZ_CP048209.1\|WP_162359157.1\|5461161_5462400_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133060	cd06438, EpsO_like, EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.	2.88351e-93
NZ_CP048209.1\|WP_162359143.1\|5445541_5446090_-\|peroxiredoxin	gnl\|CDD\|239313	cd03015, PRX_Typ2cys, Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric interface in atypical 2-cys PRX and PRX5) at the opposite end of the monomer to form the stable decameric (pentamer of dimers) structure.	7.52225e-101
NZ_CP048209.1\|WP_162359151.1\|5454857_5456603_-\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|272915	TIGR00118, Probable_acetolactate_synthase_large_subunit, acetolactate synthase, large subunit, biosynthetic type. Two groups of proteins form acetolactate from two molecules of pyruvate. The type of acetolactate synthase described in this model also catalyzes the formation of acetohydroxybutyrate from pyruvate and 2-oxobutyrate, an early step in the branched chain amino acid biosynthesis; it is therefore also termed acetohydroxyacid synthase. In bacteria, this catalytic chain is associated with a smaller regulatory chain in an alpha2/beta2 heterotetramer. Acetolactate synthase is a thiamine pyrophosphate enzyme. In this type, FAD and Mg++ are also found. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed. [Amino acid biosynthesis, Pyruvate family].	0
NZ_CP048209.1\|WP_162359140.1\|5442073_5443963_-\|anti-sigma-factor-domain-containing-protein	gnl\|CDD\|378948	pfam12791, RsgI_N, Anti-sigma factor N-terminus. The heat shock genes in B. subtilis can be classified into several groups according to their regulation, and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes. Regulation of sigma factor I is carried out by RsgI from the same operon, and this N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) has been shown to interact directly with Sigma-I.	7.913e-08
NZ_CP048209.1\|WP_162360654.1\|5460188_5460683_-\|translation-initiation-factor-IF-3	gnl\|CDD\|234582	PRK00028, infC, translation initiation factor IF-3; Reviewed.	1.05297e-90
NZ_CP048209.1\|WP_162359156.1\|5459955_5460159_-\|50S-ribosomal-protein-L35	gnl\|CDD\|234676	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed.	1.13344e-17
NZ_CP048209.1\|WP_162359141.1\|5443959_5444784_-\|RNA-polymerase-sigma-factor-SigI	gnl\|CDD\|236233	PRK08311, PRK08311, RNA polymerase sigma factor SigI.	2.02328e-99
NZ_CP048209.1\|WP_162359154.1\|5458263_5459358_-\|aminopeptidase-P-family-protein	gnl\|CDD\|223085	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism].	1.79975e-121
NZ_CP048209.1\|WP_162359149.1\|5453149_5454142_-\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP048209.1\|WP_162359148.1\|5450482_5451847_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.16168e-34
NZ_CP048209.1\|WP_162359139.1\|5441462_5441861_-\|anti-sigma-regulatory-factor	gnl\|CDD\|340411	cd16934, HATPase_RsbT-like, Histidine kinase-like ATPase domain of the anti sigma-B factor Bacillus subtilis serine/threonine-protein kinase RsbT, and related domains. This family includes the histidine kinase-like ATPase (HATPase) domain of Bacillus subtilis serine/threonine-protein kinase RsbT, a component of the stressosome signaling complex of Bacillus subtilis. The stressosome is formed from multiple copies of three proteins, a sensor protein RsbR, a scaffold protein RsbS, and RsbT, and responds to environmental changes by initiating a protein partner switching cascade. Stress perception increases the phosphorylation of RsbR and RsbS, by RsbT. Subsequent dissociation of RsbT from the stressosome activates the sigma-B cascade, leading to the release of the alternative sigma factor, sigma-B.	1.94215e-10
NZ_CP048209.1\|WP_162359147.1\|5449802_5450471_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	6.20489e-41
NZ_CP048209.1\|WP_162359155.1\|5459558_5459918_-\|50S-ribosomal-protein-L20	gnl\|CDD\|179959	PRK05185, rplT, 50S ribosomal protein L20; Provisional.	3.89008e-60
NZ_CP048209.1\|WP_162359144.1\|5446223_5447303_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_CP048209.1\|WP_162359145.1\|5447485_5449213_-\|DUF2339-domain-containing-protein	gnl\|CDD\|378390	pfam10101, DUF2339, Predicted membrane protein (DUF2339). This domain, found in various hypothetical bacterial proteins, has no known function.	4.63689e-18

>NZ_CP048209.1|WP_162359148.1|5450482_5451847_-|HAMP-domain-containing-histidine-kinase
MLFAWIVLWVASGLLLIANRRASAVRWLSLVAFCGGTGALASVLEGWIAGMLWNGNIDAAGEGTLRIVQRACSLCSYYGLPYGFLCFGASYNRDLLPGGVYRWIPVAALVPPLGMLLLPLAEDYPVHYGLLAVWALPYCAAGIVLLAAKRFMHPAERRAHALLLLAVLPAVLVALTMNYALPLFGLYRLWVYNVWPIAFAFVIFLFSLFNFGFLGVQLLIEKRQLDYSLRAITSGTAMLNHAIKNDIGKIKLFADKMAREAGERTELRTDLNVVHTAALHIETMIRSVHERTQELRLQPQEASLAPLVRSQLAAIAAQAADKRIAIREQLDEEASALTDPEQTKEAIHNVLQNAIDAMPDGGQLTVSVLAGRHGGTIEIRDTGTGIAKAHLRKVTEPFFTTKSGKAMNFGLGLAYCYQLMSRQGGELRISSEPGAGTTVRFHFRKLTKRSLRKL
>NZ_CP048209.1|WP_162359147.1|5449802_5450471_-|response-regulator-transcription-factor
MEAQPRQLIRILLVEDDPDWRRGLASYLGGEPDLLVAGDTDDPAAVLPLAAACRPDVVLLDIMMADSPEGLKLAGELCAATQARVIMLTSMEDKVFVAEAFKAGAVNYLVKSDYASIPAAIRQAAADRSAIDAYAARQMLEEFRRLKKLERDYENDRFKRMLTPSEVQLLAMIHEGYSQTQIAEKSFLSLRTVKNHVGNILRKIGGKSSKEAAQKAKNHDLF
>NZ_CP048209.1|WP_162359146.1|5449261_5449753_-|hypothetical-protein
MTEPPGKTGTPHAAGMSGKSRSLHAAGRTGTPHAAGMSDKFGPLHATDKTGTLQAAGMKATARPDTPLPARPSLHVRRRIRYAIAVSSAFSAAGAVQRGQGTDAAGAVQRGQGTDAAGAVQRGQGTDAAGAVQRVQATGAAGTPPGGTRESWYLWRQPEPPTM
>NZ_CP048209.1|WP_162359145.1|5447485_5449213_-|DUF2339-domain-containing-protein
MNDLWKRHWTTLIGVLFLLAALATLFKYTIDQGLITLPMKLGIGLLAGGAAVAAGLNAVRRPEAARSRLGEIATGLGAAIWYTTGMYAGVYEAVWEPLTVFIVMTAMTAALTAFAYRRNFRLLLGLGLGGALLAPFVLQPEADHVFPLFLYLLVVNAAYFAIGIAKSWLEPRIGAFAATWILYAVYYMNFSHPDSGWLTKPAGYALAAFAFYALAFFAAAWREKCGFAGWNMTAGFANTVIFCLWAPALLGSGHAVTMLLLAVGMLYMAMSAAVARIGKHRKQGNQARTAVYSHLLFGAFMFLIGLAELGGGSEYRPVIGACVWSVVAALAAAVGMKVRSDLMKAAASLIWLFTVIYWFATAWDVPPINWFDVYVPFLNGGAAAWMLLAAIGFGFARTIRFDRIRPESDNIVIGHIYALLSHLIVGGLLTVQIMNASDAYVWADGPMLMLSVTWGVYALLLFAWGGYSRGRLFRWFGSAVLAVVAAKTLLFDLSGEDTLYKIIAFAALGLICFGITLIDRRWRNREQNSAGADSGGAAVTSPGERTDDANSPERQAASATPASAAEEDPANGATP
>NZ_CP048209.1|WP_162359144.1|5446223_5447303_-|3-isopropylmalate-dehydrogenase
MADVKKIAVIAGDGIGPEVVGEALKVLKKTEELFGYQFETEHGLFGGIAIDEKGTPLPQETLDICKNADAVLLGAVGGPKWDNNPKELRPETGLLGIRKALGLFSNIRPANVFDCLKEASTLKPEVLEGTDLIVVRELTGGIYFGEKFRREGANGEEAVDTCVYNVVEVERIARQGFEIARTRRKKLASVDKANVLETSRLWREVVNRIAVEYPDVELEHVLVDNCAMQLLRRPASFDVIVTENMFGDIISDEAAMLTGSIGMLSSASLGEGSFGLYEPVHGSAPDIAGQGISNPIATILSVALMFRLTFGYAEAAQCIEDAVKSVLDAGHRTGDIAVDKSKAIGTTAMGDLIVAAMKK
>NZ_CP048209.1|WP_162359143.1|5445541_5446090_-|peroxiredoxin
MADRLVGRPAPDFSMETVTGNGQDFSTAALSDYKGKWLVLFFYPLDFTFVCPTEITALSAAAEQFSKLDTEILGVSVDSKHSHRAWINTPVNDNGLGQLSFPLAADITKKVARDYGVLIEEEGVALRGLFIINPEGEVKYQVVNHNDVGRSVEETLRVLQALQSGGLCPINWKPGDKHLVAK
>NZ_CP048209.1|WP_162359142.1|5444917_5445343_-|hypothetical-protein
MSFCCGASMIGTNGTLKHFRTHIHNVPILFCPVCHRVEIHYLIENEYEILAEYAHGDGASEVDFIEYVEQEDKELFENCVNNENEDPMEVVSSQIDMALDLLCFAKQIGDESWLGELKKRLGVLNQRRNKLKQRRTSEGYC
>NZ_CP048209.1|WP_162359141.1|5443959_5444784_-|RNA-polymerase-sigma-factor-SigI
MLLVLFKRIFGGKHDTSAVTPETRIAPEEMVERIRSGEASRNAFIDAYQPYIAKVTSRFCKRYIDPASSDEFSIALAAFDEAIGQFSSQAGKSFLGFAETVIRRRLIDYVRKESRHHGSVPYSAFDQDDEEESTVNAIETNEAMNRYSLTQESEARRFEIAEFDGRLREYGITFGELPDISPKHSDSRQLLIGISRRLANDPELYDQLETKQKLPIKELCEIIGVSRKTIERNRKYIIALTILHNGDFPYLQQYIKPQEPPVHKELPAVEGVRA
>NZ_CP048209.1|WP_162359140.1|5442073_5443963_-|anti-sigma-factor-domain-containing-protein
MSRGIVMETGSKHVIVLTPDGQFRKVRTALKPEIGEEFAFQEQRRLQRPRKLYSFSIGAAAVMLFLFAPFIAQRFSHASPVVAYVTMDVNPSIELGIDKNERVEELHPINTDGKDVTEGLSFKGKPLQKVTEAIMDRISAGPYLNSGEGDVVITSVAVGDNVKPAQEISLTAQMDSAVRKSLAKTEKGRKLEVDVTTLSAPKEVREEAKQAGISSGKMAFYLMAKEQGYQISIKELKRESIHQAAKPMGGVAAVMNDQRAKGSKPPAADTAKPQTVKPQPVNPPASKEAEKEAQRVKLKQQLEGLAKKEQAKRGNGNGNDNRNGNGNGNWNNNKKAEDKKGPDPNQILQQGGIINIGNHSPGNIMKGWPSGSLDQSQAKGNGNGNGNGKSKGNGGSAIGKSNGKGNGNGNGKGSPYSQSKGSSSGHNASGAGGQSSGSGGGHAQGGKSGGQHDSGSIVRGSGASGGNDKRDDNRAKPESKPSSQQQLHTILFPSGSQGGLKDADNHLQGGKDEAKNASDSRHSGVNRGEDKQAATREDREERNGREDRDDRGTGRDNGGNKAGSAGQGNNAVKAGNGNKDSQSNKDSQSNKDNQSYKDSQSDKTNKSNKDNKSSKDNGSDNGKSKKKKD
>NZ_CP048209.1|WP_162359139.1|5441462_5441861_-|anti-sigma-regulatory-factor
MEMFHIQEKSDAILARQRGRELAKTIGFSLVDQTVIAYTVSELALKLIAIAAKGHMTIRPVSLFKGDQASGIEVRLFDHFKGPSRIHLQWTEKMTDSFELSYDQARGTMIAFHKWVHAPLRVHIPICAAGEE
>NZ_CP048209.1|WP_162359149.1|5453149_5454142_-|ketol-acid-reductoisomerase
MAVKLYYEKDADQSVLQGKTIAVIGYGSQGHAQAQNLRDSGLKVIIGLRAGKSAEKAKNDGFEVLSVGEAVKLADVVQILMPDETQARVYKEEIEPNLKQGAALMFSHGFNVHFGQIKARKDNDVLLVAPKSPGHMVRRTYVEGFGVPGLIAIEQDATGNAQAIGLAYAKGIGCTRAGVIETSFKEETETDLFGEQAVLCGGASALVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMYEGGLATMRDSISNTAEYGDYVTGPRIVTDETKKAMKAVLTDIQQGKFARDFILENQSNNAFMTATRRNEAAHPIEVVGGQLRELMHWIKK
>NZ_CP048209.1|WP_162359150.1|5454375_5454861_-|acetolactate-synthase-small-subunit
MKRHTIAVLVNDQPGVLQRVSGLFGRRGFNIESITVGTSEEAGLSRMVIVTTGDDNTLEQVIKQLYKLIDVIKVIDLSANPMVARELALIKVNAEPAARPEIMGVVETFRAAVVDIGTHSLMVQVVGDTEKIDAMVELMKPYGIRELSRTGVTAMTRGNAK
>NZ_CP048209.1|WP_162359151.1|5454857_5456603_-|biosynthetic-type-acetolactate-synthase-large-subunit
MVAQHATLRSKEEIKERLRKPEVITGSEILLRSLVLEDVDCVFGYPGGAVLYIYDAMHGFSDFQHLLTRHEQGAIHAADGYSRASGKVGVCIATSGPGATNLVTGIATAYMDSVPLVVITGNVATTLIGTDAFQEADITGITMPITKHSYLVRKAADLPRIIHEAFHIANTGRKGPVLIDIPKDVSAELTMFEPVTEVSIRGYNPTVQPNKLQVDKMLKAIEEAERPIVLAGGGVVYSGGHEELHEFIIKSGIPITTTLLGLGAFPSGEELWLGMPGMHGTYTANMSIQSADLLINIGARFDDRVTGKLKGFAPHAKIVHIDIDPAEIGKNVPTDIPIVGDVKTVLQIANKDVRYAAKADAWREQLAASKKEKPFRYTDSEDELKPQWVIEMLYEETNGEAIVTTDVGQHQMWAAQFYKFNKPRSWVTSGGLGTMGFGFPSAIGAQMANPDRLVISINGDGGMQMCAQELAICAINNIPVKVVIINNQVLGMVRQWQELIYDNRYSHIDLSGSPDFVKLAEAYGVRGFRAKTKEEARAAWAEAMNHPGPAVVEFVVRKGENVYPMVTQGSTIDQMLMGDAE
>NZ_CP048209.1|WP_162359152.1|5457162_5457609_+|GNAT-family-N-acetyltransferase
MIRARRARTDDTEIIRLIKQELIPLSYTASPRDAQTIRELPKRMNDGVSLVYSRTRRSQPLGYIHYYIRDDTLLYDLLVVHPDHRGKQIGTTLMSHAEKQGREKGVKVARLFVDHGNPRAQRLYARLGFQTVRYYSDLRCYEMLKPLV
>NZ_CP048209.1|WP_162359153.1|5457612_5457993_-|hypothetical-protein
MPRVTKEQAQKLVGKTIYAVRKDGSVVTGKLVRMHHNQLQLVPVVKGKEVQTRAIIPLVLFDLLAIGLFASPGFGFGGFGPGFGPGFGPGFGPGFGPGVGPGFGPGFDGGCCQPGPGAGFANTPFF
>NZ_CP048209.1|WP_162359154.1|5458263_5459358_-|aminopeptidase-P-family-protein
MNVRINQMHAYMDDNGVDAVLVTEPKHVYYLTGFASNPHERFLGLLLPRGDEAILLVPALDLEAAQAAAGASVAKIHTHSDTDDAYAVLRSLMPAGVRVLGIEKEQLSVRRFEALSEAVGAESYVDIGLPLRDMRVVKSPEEAELMRNAVRIVEDVLRAGIALVKPGVTEIELVAELEYRMRKLGAQGPSFDTLVLAGANSALPHGMPGRTAVREGELLLFDLGVFAGGYASDITRTFAVGDVTDEMKRMYAAVLDGNLRAIEAVRPGAALASLDRAARDSITAAGYGPQFNHRLGHGLGLDIHEYPSVHGNNAELLREGMTFTIEPGVYVPGVGGVRIEDDVLVTANGVEVLTRFPKELTVIG
>NZ_CP048209.1|WP_162359155.1|5459558_5459918_-|50S-ribosomal-protein-L20
MARVKGGFVRARRRKRILKLAKGYFGSKHRLFKTAKEQVMKSLLYAYRDRRQHKRDIRKLWIVRINAAARQNGLSYSKFMFGLKQAGVEVNRKVLADLAVNDINSFNAIASLAKQKINA
>NZ_CP048209.1|WP_162359156.1|5459955_5460159_-|50S-ribosomal-protein-L35
MPKMKTHSSLKDRFKITGTGKVMRYKAYKNHLLSGKSARQKRVLATNPVMAAGDVKRLAQGLANIKG
>NZ_CP048209.1|WP_162360654.1|5460188_5460683_-|translation-initiation-factor-IF-3
MNDEIRAREVRLVGAEGEQIGIKPFREALQMAIDLNMDLVNVAPTAKPPVCRIMDYGKFRYEQQKKEKEARKNQKIVDTKEVWFRANIDENDYQTKYRNVVKFLGEGDKVKCSVRFRGREITHASVGQKILDRLANEVADLCVMERVPKLEGRSMIMILAPKPS
>NZ_CP048209.1|WP_162359157.1|5461161_5462400_-|glycosyltransferase-family-2-protein
MINTIIIMFQIFLAFIGVYQFVISLFGIARKRRSAQHKPQKSFAVLVAAHNEAQVVGALVENLKNLDYPKELYDIFVICDNCTDNTADIARGYGVHACERKNPHLRGKGHAIEWMLKELWAMPRQYDAIVMFDADNLVGNDFLLHMNNDLCEGHKVIQGYLDTKNPTDSWVTASYAITYWYCNRLWQLSRRNLNMANYLGGTGMCFDTELMKEMGWGATSLVEDLEFSMRCVKRGIHPVLNYDAKVYDEKPLTFKASARQRLRWMQGHFTVARSYFFPLLWQSIKERSFVKFDAALYSISVYNTFLGFLVTALLYVDNLIPADNVFASIYYYLPWWAAAVAITATVVMFPLVMALEGIKSWKMYAHLLSMVFFQLSWLPITFYAFFTQNNKQWSHTQHTRVLRLEEVQSKQV

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Crispr_ID: NZ_CP048209_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_22

6138673-6141288

TypeI

Consensus_repeat	Method
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CRT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CRISPRCasFinder
ATTTCAATCCACGCATCCGCACGGGATGCGAC	PILER-CR

39 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP048209_22

>merge|NZ_CP048209|22|6138673-6141288|CRT,CRISPRCasFinder,PILER-CR
ATTGAATTCACGTATCCGCTACGGGATGCGGCATTTCACGAAAGACGGAATTTCCCATGGCTAGGAATTTCAATACTACGCATCCGCACGGGATGCGACGACCGGTAGCTTCACTGGCGGCCGGGGCGGCTGATTTCAATCCACGCATCCGCACGGGATGCGACGATGCGCTGATGCCCATGCGTTCTGCGTCCCGTAATTTCAATCCACGCATCCGCACGGGATGCGACCGGTATCATTGCCATATTCACCGTTTAACGATGTATTTCAATCCACGCATCCGCACGGGATGCGACTTTGGATGCATGGAACTTTAATACGAATGCGGTATTTCAATCCACGCATCCGCACGGGATGCGACGTCGACGGCCGCGTTATTGACTGTCTTCGTAAGATTTCAATCCACGCATCCGCACGGGATGCGACATCAAAATGAGCCCGTCGAAGTTCATCACACACAAATTTCAATCCACGCATCCGCACGGGATGCGACCCAACTCATACCCATTCCCCCTAATGGATCGGAATTTCAATCCACGCATCCGCACGGGATGCGACGAAAAACGGACAAGACGATGCGGTCGCTGCGGTCATTTCAATCCACGCATCCGCACGGGATGCGACGGTATCCTCGGCCAGATCTTCGGCATTCGAATCGGATTTCAATCCACGCATCCGCACGGGATGCGACTCAACGGGACGTTGATCGACGGACTCTCCGATGGTATTTCAATCCACGCATCCGCACGGGATGCGACGGCGAAGTTGAACAACCAGACATGATGTTACTCGAAATTTCAATCCACGCATCCGCACGGGATGCGACGACATTTCCGTTATGCTTAAAAAAGGTTCGGGCGATTTCAATCCACGCATCCGCACGGGATGCGACAATGACGATAATGCGCGAAATTGCAACAATGATCATTTCAATCCACGCATCCGCACGGGATGCGACTGTTGCCTGGCACAAATGTATCTCTGATCGTCGAATTTCAATCCACGCATCCGCACGGGATGCGACTCAGACAGGGATCGTCGGAAACAGATACGCAGGCATTTCAATCCACGCATCCGCACGGGATGCGACGAGCAAGGCATCTGTCAATCTTCCAAACTATGTTATTTCAATCCACGCATCCGCACGGGATGCGACATGAAAGGGATTGATGGATAATGGTCGATGTGCCATTTCAATCCACGCATCCGCACGGGATGCGACGGAACGCATTCCAGCAACGGCAGCGACTTTGTTACAATTTCAATCCACGCATCCGCACGGGATGCGACTAAAGGCGAAGATTAAGCGTAACCTATCGGACGATTTCAATCCACGCATCCGCACGGGATGCGACTTGGGAGAAAGATTTATTACGAAATCGGCACAGGATTTCAATCCACGCATCCGCACGGGATGCGACTTCGCCAGAAACAGGTTTGGCAATGGCAACGATATTTCAATCCACGCATCCGCACGGGATGCGACGGTGAGTGTGCTGATGGACACCGGCAAGGTGACGGAATTTCAATCCACGCATCCGCACGGGATGCGACCCGTTGTCCTGGAGCGTTTTCGACAATAGTTCTTATTTCAATCCACGCATCCGCACGGGATGCGACGATGGCGCTTATGTCGTGTATGTCAGCGATACCGAAATTTCAATCCACGCATCCGCACGGGATGCGACAAGCAACGAAAAGAAATCCTGATGGATTACGACGATTTCAATCCACGCATCCGCACGGGATGCGACGTTTATTGCGGCTTCCCGCGACGATCTCCCTTCATATATTTCAATCCACGCATCCGCACGGGATGCGACGTCGTTCGTTAACCCAAATCAGTATGGCTCGACGATTTCAATCCACGCATCCGCACGGGATGCGACACAAATTTACGCAAATGGATTGGCTGGAGTATCTGATTTCAATCCACGCATCCGCACGGGATGCGACGATTAAATGCGATCATTGTGGCGGAGATGTCGTTACATTTCAATCCACGCATCCGCACGGGATGCGACGTCGCGGAAGCGCGGAAACGGCTCAAGGAAAACGATTTCAATCCACGCATCCGCACGGGATGCGACGCAGGCGTTCCTACACTGCCGCAGCCAACAGCAATTTCAATCCACGCATCCGCACGGGATGCGACGCATAGAAGTAGTGCAGCCGATCAGGAGTGTTGAATTTCAATCCACGCATCCGCACGGGATGCGACTCGACGGAATGGACTGTAGGCGATGGCGTATATATTTCAATCCACGCATCCGCACGGGATGCGACATCGGCGCTATCAACGGAATCGGCGTGCGGTAAAATTTCAATCCACGCATCCGCACGGGATGCGACTTGAAGTCAGTCGGATGAACATTCGCTGAATACGATTTCAATCCACGCATCCGCACGGGATGCGACATGTACGTGGAGCCGTGAGGCGAATCTGGTGCTTATTTCAATCCACGCATCCGCACGGGATGCGACGAAACCGAACGCTTCAACAACGACATGCTAAATATTTCAATCCACGCATCCGCACGGGATGCGACTCCGAAAGCAACAGCCGGAATGGAAGTATATTTCGATTTCAATCCACGCATCCGCACGGGATGCGAC

>NZ_CP048209|22|3|6138673-6141288|CRT
ATTGAATTCACGTATCCGCTACGGGATGCGGC	ATTTCACGAAAGACGGAATTTCCCATGGCTAGGAA
TTTCAATACTACGCATCCGCACGGGATGCGAC	GACCGGTAGCTTCACTGGCGGCCGGGGCGGCTG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGCGCTGATGCCCATGCGTTCTGCGTCCCGTA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CGGTATCATTGCCATATTCACCGTTTAACGATGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTTGGATGCATGGAACTTTAATACGAATGCGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGACGGCCGCGTTATTGACTGTCTTCGTAAG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCAAAATGAGCCCGTCGAAGTTCATCACACACAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCAACTCATACCCATTCCCCCTAATGGATCGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAAAACGGACAAGACGATGCGGTCGCTGCGGTC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTATCCTCGGCCAGATCTTCGGCATTCGAATCGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAACGGGACGTTGATCGACGGACTCTCCGATGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGCGAAGTTGAACAACCAGACATGATGTTACTCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GACATTTCCGTTATGCTTAAAAAAGGTTCGGGCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AATGACGATAATGCGCGAAATTGCAACAATGATC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TGTTGCCTGGCACAAATGTATCTCTGATCGTCGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAGACAGGGATCGTCGGAAACAGATACGCAGGC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAGCAAGGCATCTGTCAATCTTCCAAACTATGTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGAAAGGGATTGATGGATAATGGTCGATGTGCC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGAACGCATTCCAGCAACGGCAGCGACTTTGTTACA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TAAAGGCGAAGATTAAGCGTAACCTATCGGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGGGAGAAAGATTTATTACGAAATCGGCACAGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTGAGTGTGCTGATGGACACCGGCAAGGTGACGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCGTTGTCCTGGAGCGTTTTCGACAATAGTTCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGGCGCTTATGTCGTGTATGTCAGCGATACCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AAGCAACGAAAAGAAATCCTGATGGATTACGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTTTATTGCGGCTTCCCGCGACGATCTCCCTTCATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGTTCGTTAACCCAAATCAGTATGGCTCGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ACAAATTTACGCAAATGGATTGGCTGGAGTATCTG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATTAAATGCGATCATTGTGGCGGAGATGTCGTTAC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGCGGAAGCGCGGAAACGGCTCAAGGAAAACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCAGGCGTTCCTACACTGCCGCAGCCAACAGCA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCATAGAAGTAGTGCAGCCGATCAGGAGTGTTGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCGACGGAATGGACTGTAGGCGATGGCGTATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCGGCGCTATCAACGGAATCGGCGTGCGGTAAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGAAGTCAGTCGGATGAACATTCGCTGAATACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGTACGTGGAGCCGTGAGGCGAATCTGGTGCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAACCGAACGCTTCAACAACGACATGCTAAAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCCGAAAGCAACAGCCGGAATGGAAGTATATTTCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC

>NZ_CP048209|22|19|6138740-6141288|CRISPRCasFinder
TTTCAATACTACGCATCCGCACGGGATGCGAC	GACCGGTAGCTTCACTGGCGGCCGGGGCGGCTG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGCGCTGATGCCCATGCGTTCTGCGTCCCGTA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CGGTATCATTGCCATATTCACCGTTTAACGATGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTTGGATGCATGGAACTTTAATACGAATGCGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGACGGCCGCGTTATTGACTGTCTTCGTAAG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCAAAATGAGCCCGTCGAAGTTCATCACACACAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCAACTCATACCCATTCCCCCTAATGGATCGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAAAACGGACAAGACGATGCGGTCGCTGCGGTC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTATCCTCGGCCAGATCTTCGGCATTCGAATCGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAACGGGACGTTGATCGACGGACTCTCCGATGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGCGAAGTTGAACAACCAGACATGATGTTACTCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GACATTTCCGTTATGCTTAAAAAAGGTTCGGGCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AATGACGATAATGCGCGAAATTGCAACAATGATC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TGTTGCCTGGCACAAATGTATCTCTGATCGTCGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAGACAGGGATCGTCGGAAACAGATACGCAGGC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAGCAAGGCATCTGTCAATCTTCCAAACTATGTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGAAAGGGATTGATGGATAATGGTCGATGTGCC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGAACGCATTCCAGCAACGGCAGCGACTTTGTTACA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TAAAGGCGAAGATTAAGCGTAACCTATCGGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGGGAGAAAGATTTATTACGAAATCGGCACAGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTGAGTGTGCTGATGGACACCGGCAAGGTGACGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCGTTGTCCTGGAGCGTTTTCGACAATAGTTCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGGCGCTTATGTCGTGTATGTCAGCGATACCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AAGCAACGAAAAGAAATCCTGATGGATTACGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTTTATTGCGGCTTCCCGCGACGATCTCCCTTCATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGTTCGTTAACCCAAATCAGTATGGCTCGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ACAAATTTACGCAAATGGATTGGCTGGAGTATCTG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATTAAATGCGATCATTGTGGCGGAGATGTCGTTAC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGCGGAAGCGCGGAAACGGCTCAAGGAAAACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCAGGCGTTCCTACACTGCCGCAGCCAACAGCA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCATAGAAGTAGTGCAGCCGATCAGGAGTGTTGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCGACGGAATGGACTGTAGGCGATGGCGTATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCGGCGCTATCAACGGAATCGGCGTGCGGTAAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGAAGTCAGTCGGATGAACATTCGCTGAATACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGTACGTGGAGCCGTGAGGCGAATCTGGTGCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAACCGAACGCTTCAACAACGACATGCTAAAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCCGAAAGCAACAGCCGGAATGGAAGTATATTTCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC

>NZ_CP048209|22|3|6138805-6141288|PILER-CR
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGCGCTGATGCCCATGCGTTCTGCGTCCCGTA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CGGTATCATTGCCATATTCACCGTTTAACGATGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTTGGATGCATGGAACTTTAATACGAATGCGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGACGGCCGCGTTATTGACTGTCTTCGTAAG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCAAAATGAGCCCGTCGAAGTTCATCACACACAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCAACTCATACCCATTCCCCCTAATGGATCGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAAAACGGACAAGACGATGCGGTCGCTGCGGTC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTATCCTCGGCCAGATCTTCGGCATTCGAATCGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAACGGGACGTTGATCGACGGACTCTCCGATGGT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGCGAAGTTGAACAACCAGACATGATGTTACTCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GACATTTCCGTTATGCTTAAAAAAGGTTCGGGCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AATGACGATAATGCGCGAAATTGCAACAATGATC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TGTTGCCTGGCACAAATGTATCTCTGATCGTCGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCAGACAGGGATCGTCGGAAACAGATACGCAGGC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAGCAAGGCATCTGTCAATCTTCCAAACTATGTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGAAAGGGATTGATGGATAATGGTCGATGTGCC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGAACGCATTCCAGCAACGGCAGCGACTTTGTTACA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TAAAGGCGAAGATTAAGCGTAACCTATCGGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGGGAGAAAGATTTATTACGAAATCGGCACAGG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GGTGAGTGTGCTGATGGACACCGGCAAGGTGACGGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	CCGTTGTCCTGGAGCGTTTTCGACAATAGTTCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATGGCGCTTATGTCGTGTATGTCAGCGATACCGAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	AAGCAACGAAAAGAAATCCTGATGGATTACGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTTTATTGCGGCTTCCCGCGACGATCTCCCTTCATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGTTCGTTAACCCAAATCAGTATGGCTCGACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ACAAATTTACGCAAATGGATTGGCTGGAGTATCTG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GATTAAATGCGATCATTGTGGCGGAGATGTCGTTAC
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GTCGCGGAAGCGCGGAAACGGCTCAAGGAAAACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCAGGCGTTCCTACACTGCCGCAGCCAACAGCA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GCATAGAAGTAGTGCAGCCGATCAGGAGTGTTGA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCGACGGAATGGACTGTAGGCGATGGCGTATAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATCGGCGCTATCAACGGAATCGGCGTGCGGTAAA
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TTGAAGTCAGTCGGATGAACATTCGCTGAATACG
ATTTCAATCCACGCATCCGCACGGGATGCGAC	ATGTACGTGGAGCCGTGAGGCGAATCTGGTGCTT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	GAAACCGAACGCTTCAACAACGACATGCTAAAT
ATTTCAATCCACGCATCCGCACGGGATGCGAC	TCCGAAAGCAACAGCCGGAATGGAAGTATATTTCG
ATTTCAATCCACGCATCCGCACGGGATGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162359660.1\|6153137_6154124_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP048209.1\|WP_162359648.1\|6129457_6130318_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|366736
NZ_CP048209.1\|WP_162359651.1\|6132338_6133742_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270451
NZ_CP048209.1\|WP_162360702.1\|6141466_6141757_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP048209.1\|WP_162359658.1\|6146209_6146929_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP048209.1\|WP_162359650.1\|6131319_6132270_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162359649.1\|6130479_6131313_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162359654.1\|6141766_6142798_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP048209.1\|WP_162359659.1\|6147134_6149570_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP048209.1\|WP_162359655.1\|6142794_6143454_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP048209.1\|WP_162359661.1\|6155846_6156974_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP048209.1\|WP_162359656.1\|6143443_6144310_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP048209.1\|WP_162359653.1\|6135642_6137265_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP048209.1\|WP_162359652.1\|6133722_6135627_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP048209.1\|WP_162359657.1\|6144326_6146213_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP048209.1\|WP_162360700.1\|6128096_6129059_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP048209.1\|WP_162359647.1\|6127211_6128081_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162360703.1\|6154120_6155611_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP048209.1\|WP_162360701.1\|6137630_6138500_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162359646.1\|6125280_6126960_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270298

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162359660.1\|6153137_6154124_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	5.27139e-76
NZ_CP048209.1\|WP_162359648.1\|6129457_6130318_-\|phosphotransferase	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	0.000618841
NZ_CP048209.1\|WP_162359651.1\|6132338_6133742_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270451	cd14748, PBP2_UgpB, The periplasmic-binding component of ABC transport system specific for sn-glycerol-3-phosphate; possesses type 2 periplasmic binding fold. This group includes the periplasmic component of an ABC transport system specific for sn-glycerol-3-phosphate (G3P) and closely related proteins from archaea and bacteria. Under phophate starvation conditions, Escherichia coli can utilize G3P as phosphate source when exclusively imported by an ATP-binding cassette (ABC) transporter composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.65107e-108
NZ_CP048209.1\|WP_162360702.1\|6141466_6141757_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.96999e-30
NZ_CP048209.1\|WP_162359658.1\|6146209_6146929_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.63649e-95
NZ_CP048209.1\|WP_162359650.1\|6131319_6132270_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.18421e-91
NZ_CP048209.1\|WP_162359649.1\|6130479_6131313_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.1562e-82
NZ_CP048209.1\|WP_162359654.1\|6141766_6142798_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP048209.1\|WP_162359659.1\|6147134_6149570_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.08168e-70
NZ_CP048209.1\|WP_162359655.1\|6142794_6143454_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.92949e-28
NZ_CP048209.1\|WP_162359661.1\|6155846_6156974_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	5.27396e-107
NZ_CP048209.1\|WP_162359656.1\|6143443_6144310_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	2.28492e-128
NZ_CP048209.1\|WP_162359653.1\|6135642_6137265_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.30724e-57
NZ_CP048209.1\|WP_162359652.1\|6133722_6135627_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.00669e-53
NZ_CP048209.1\|WP_162359657.1\|6144326_6146213_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	3.6188e-171
NZ_CP048209.1\|WP_162360700.1\|6128096_6129059_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	8.99134e-115
NZ_CP048209.1\|WP_162359647.1\|6127211_6128081_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.12817e-65
NZ_CP048209.1\|WP_162360703.1\|6154120_6155611_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP048209.1\|WP_162360701.1\|6137630_6138500_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.33828e-27
NZ_CP048209.1\|WP_162359646.1\|6125280_6126960_-\|hypothetical-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	6.39825e-71

>NZ_CP048209.1|WP_162360701.1|6137630_6138500_-|sugar-phosphate-isomerase/epimerase
MNVKLGMRIPPKIGAEGMEFTAKLAKQAGLDVLDLPRLTPEWKAACEAEGLGFGTIDAHYTGQLLSRDDARRANAVESAKKEISDIAALGGRVLFMCLVPEDHTLPRKEGFELFKDSFPEVVKHAEQQGVYIAIEGWPGPAPHYPTLGCTPEMWRAMFNAIPSRHFGLNYDPSHMVRLGIDYIRALGEFGERINHVHGKDTEILHDELYECGVLEATFGAKYGFSEGSWRYTIPGHGEVDWGKVAVRLERLGYQGAVSIELEDHRFWGSLEAEKQGIETAARHLEKYFK
>NZ_CP048209.1|WP_162359653.1|6135642_6137265_-|response-regulator
MFSLLVVEDEQWIRRGLCETIDWANEGIRLSGEAADGEEAMRFMESHSPDIVITDIVMPGMDGITFLKSLREQKMSSEVIIMSGYSDFEYARTALKNGAFDYVLKPIHEQNMLSVIRRCVQELKQKRQAESEMNRLARSARETLFLARQRLFDMLLTEAPYSPGWLTEQMKALQVELEPGRIRTFVAKIVDWGDKAENDRDRALMLYALCNMLEETGSRFGPAVAFPIHNGKTSGEADVAMLHTDNGSAGGGQPGVAGELPGLIEEVGRMLGLRISVGYSREADIGRLSVMLEEALHAAAHWFYEGGGSLRGAESLASAMQTDLPYCGPAGWDGRFASALRMADAKLIEQLVRELGEHIRASRASHLPLTIRRGLKLLFQNVNQKCDALHRRSQCGEPAASEPLKLPPATADAFENVLLENLSRAMPGDRPVRNRKWIVERALQYIEANRGKIVTMNDVAAHLYLNHSYFSKIFREEMGETFSKYVLQSRIETAKRLLKETPLKIYEIAGQLGYTDIRHFTKMFKESEGITPAQFRDYGL
>NZ_CP048209.1|WP_162359652.1|6133722_6135627_-|sensor-histidine-kinase
MKWLPKFNWTSVGHRLFLLCFVGISVSIAFMGYYFYHKSTRIIQDKVGYITQQAIQQSGERLDLIMEEYSTRSFYLLGNKKLQKGIKDDFVDNYDREETNKDIGEFIANQLNTKNDLINLYIFGEYANSYKYSTGYQSMPATTSAIRTTDWYRDIVAGDGKVVWFGMRKGLIRQPWADDRWEEPVFCFGRAIKDMNNLNRVIGVMLIEIDPETILSQINLGKVGSSMLVDAENRIIGSRAPDQLLSAIPFKMPQSASSIDTQMIGSERMMVTHAQLANGWSLVGLVPEKALVQESRVLGWFTFYLAVGFMAVALGYALFAAWQLNKPVRRLLKGMQEARSGNFEIQIDANRKDEFGLLSRGFNTMIARIKELIDELYVQRLLQQELQLKMFASQINAHFLYNTLDSIHWIAKLYKVKELDTMIHSLSSYFRISLNEGREFVKVSEVIALIEHYCDIQQTRFGSRVALSLTADHELLDCEVLKFAFQPIVENAIFHGIEKKRGRGKVTVEWKRVEDGLLFVVSDDGVGMRQDKLAEIRDALQDGEALRAGSNFAIKNINTLLRLTYGPAYGLEIDSIWGEGTRVMMRLPIVDVELRDKNAHGKNKRDLPYLSNEHAYNKRDSNIKREDSYEMETQ
>NZ_CP048209.1|WP_162359651.1|6132338_6133742_-|ABC-transporter-substrate-binding-protein
MKWKLNSLSVAALAAIVVLSGCGSNSGNGNSGTTGNADSGTNAPANAAANNGKDDAAASGGDKAADSGSGDKQETVNFWVNWGGDFKKDYQKYVIDEFEKKYPNIKVKMTYVEGTDKLLTSIAGGNPPDIAQLDRFMVGSWAAKGSLEDISDLVERDNISKDDYYPAVWAEANYDNKTYALPWGTDDRALYYNKTLMKQAGLDPEKPPTSMEELDAMADKIFKKGGNGKYDTVGFVPWMNQGSIYAYAWAMDGKFEDNGQLTPNDPQNVKALQWMADYAKKYNIATLSSFSNAMGQTGLNPFWTGKVGFIVDGNWILNDLAKTKPTFEWGVTPIPGPEGTQPTTWSGGHSYVMPKGTKHKEAAWTLLKFIAGHDGTLLWAKRPDAGNDITAMPGVNTELKMDENPNLKVFLDLMPNAHFRPVSPVGQKLWDEMFRVQDLAINGKGEPQALLDDVKKNVDNELAKITK
>NZ_CP048209.1|WP_162359650.1|6131319_6132270_-|sugar-ABC-transporter-permease
MAANENVAPTLKAVPNSRTKSSSYKRKMALYGVLFASPWIIGILTFSAYPLIMSIYYSFTTYSILDHGQWVGFGNYKELMGDTTFKIAIYNTLYYTLISVPLNIAVGVGLALLLNTKIKGQGIYRTLFFIPSLVPAVATTIIWLWLLNPQFGLVNYWLEQIGIPGPPWLGSESWSKPSLILMSLWGVGQAIVIYLAGLQDIPQDYYEAADIDGASTLRKLRHITLPLMTPVIFFNLIMGVIGTMQNFVLPYTLTNGTGSPADSLMFYVMYLYQNAFLYLKMGYASAMAWILFLMVVALTALIFISQKRWVHYQGKE
>NZ_CP048209.1|WP_162359649.1|6130479_6131313_-|carbohydrate-ABC-transporter-permease
MSPNAIRRIKNSATHIFLVVFGLFFLSPFLWIISTALKPDEELFLWPPKWIPSHLMWSNFPDAISYFPFWSYLGNTLTITALATAGVLFSCPIVAYSLARIPWKGSKPLFGLTLIIMMLPYQVTMIPIFIVFKNLGWVGTNVPLWLPAFFGAPFYIFLLRQFFMGLPKELEDAGRIDGASELRIYSQIMLPLCKPALLTVALFQVMGSWTDYQGPLIYLSDESQYTLMLGLSSFKTQHGAEWQMMMAASALITVPIILLYFGVQKAFIRGITFSGIK
>NZ_CP048209.1|WP_162359648.1|6129457_6130318_-|phosphotransferase
MHLHPHFELSLHDDGELADILGSPVTERASIHEWPLSCVQRIRTADGRSYIYKVQAPPTLEAEFYARARSPLLAEASAIEVKGRPPALLMADIEAPRLSELRPRKAEAAAIADELLAGIAAIEGELPAMADLRTEERFAAYIGAALDDVQASIDDGSFVKTGEAMLGRLRQWSGSAAIREAFRTPSGYVHADLKADNVLAAPGGYIILDWQRPILAPVALDRAALLLSLGVEPSGLVEPGILQLYHFLHLAWFAQAGRRWFPQGKPWFDGIIAGIAGELERLQQAD
>NZ_CP048209.1|WP_162360700.1|6128096_6129059_-|sugar-ABC-transporter-permease
MKSEPAKRRRRASTGKSGLTAGLKGVVKHWQLTLLLLPVLIAILVFCYFPMLWLVIAFKDYNIGKGIWGSPWVGWKHFHMFFTYPDFLRLIRNTLVISLLNLAFGFPAAILFALLLNEIRHSIFKRTVQTLTYLPYFIPWTIMAGFISLLFSIDGLINGLLEDMGLRTHNFLTNNTNFIELVIGSGIWKGMGWSSIIYLAAIAGVNPQLYEAALIDGASRFQRIKSITVPAIMPVIGITFILQVGGLMSANFDQLFNLYNTQVYKVADVIDTYVVRMGVSQLQYSITTAMGLFKGVVGFVLIMLSNWVIRLTSDGENSLW
>NZ_CP048209.1|WP_162359647.1|6127211_6128081_-|carbohydrate-ABC-transporter-permease
MAGRKSTWFDWLNYVFMVLLCFTMVYPFLHTFSLSFSSPLEAGKGGFMFWPRGFQLDTYKGLFHDDVFWRSYLNIVIVTVVGTVGCLLLTAGAAYTLSLPHYPFRRFITMMIVFTMFFSGGIIPSYLLVKQLNLMDSWIPLWVPGLIAGFNIILLINFFRQIPAELREAAVIDGASDFAVFLRIVIPLSKPVLATVGLFLAVMFWNDWFSAYLYINDPNKYTLPLILRKYVANAEMDSLSGFIRSTNNRILPGQVKATVILVGVLPTLIIYPFIQKYFVKGVTLGSLKG
>NZ_CP048209.1|WP_162359646.1|6125280_6126960_-|hypothetical-protein
MNRAMTKTRRGLMLSFAVLMTAGMVGCSGNSNSNGGDGGNGSGSAAANNGGGSAAAANGAGSTNAGNAAEPAPADKTYEIKYHGSFQLDGMKQDSDVEQAIEKKFNVKIDLVNAKMDKINLLAASNDLPDIIRIADPKDVATLASSGMLLELPESLLQEQMPDVINSLNQVDQGLWGLTKVESKNYAIPQYLTVVPWDSAMTFRKDILDAAGIADVPATIDQYDAAFKAIKADEKAIAATTSPGVKKLYMFGGADMQYGWNAWSWLFGAYGSMPDTWQLDANGNVARGETLPGTKDALAKLREWYAAGYIDPAFVTDKGDQYGAKYNTGTYVMGTRGLNQISSPNTDDLQKNIPTVQYVNAKSPAGPNGDAGVWSWGKRQNFVGISAKLKDDPDKVKKILSMLNTIATDEELYKLTHWGIEGKSYKLTDGIPVAIQPYDNDKSPETAALGVGSMDGQGGSLFGPFGNIDLVKKYMDPKLVEATNQYYTGKPDVIFMLPLPSTATTEQRIIDKWNETFTKIVIGEAPLSAYDDFLKWFKDNGGEQLTKEANDLYAANFKS
>NZ_CP048209.1|WP_162360702.1|6141466_6141757_-|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVNTTSNTGQRRLRQVSKICQNVGQRVQNSVFECVVDAAQLAQLKLKLLEVIDVHQDSLRFYQLGNNYKNKVEHVGAKASIDLEGPLIL
>NZ_CP048209.1|WP_162359654.1|6141766_6142798_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLFITQSDVYLSLDGDNIVLLKDEEKLGRLPLHNLESIISFGYTGASPALMGYCAERNISISFYTANGRFLARVIGESRGNVVLRKRQYALSEDELQSALIARNFIIGKIYNHKWMIERMTRDYPMRIDVSHFKTVSQQLSGFIKEVRECDNLQRLRGLEGLAAVCYNKLLDAMILQQKEDFYFHSRSRRPPLDNVNAMLSFAYSLLANDVAAALEGVGLDAYVGFLHRDRPGRASLALDMMEELRGVYADRFVLSLINKRVVNKDDFLTKENGAVLMKDEARKKFLTAWQAKKQEKISHPYLSENISWGLVMHAQALLLARYLRNDLDEYPPFLWK
>NZ_CP048209.1|WP_162359655.1|6142794_6143454_-|CRISPR-associated-protein-Cas4
MADKDDEDFLLLSGIQHYQFCKRQWALIHIEQQWAENVRTIEGEHLHRKVDQPFTREKRGDRLVVRAMPVKSERLQLTGVCDVVEFVRNESGVEVHGADGRYIPYPVEYKRGKPKRNEEDILQLAAQAICLEEMTLCNVDSGFIFYNEIKHRIEVELTEAIKHKVRLVVAQMQDYYKRRYTPRVTPGSFCQSCSLLHICMPEMMTKRSVKSYVEGKIKE
>NZ_CP048209.1|WP_162359656.1|6143443_6144310_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATLSKKIDFAVILSVTKANPNGDPLNGNRPRQNYDGHGEISDVALKRKIRNRLQDMGESIFVQSNDRKSDAFNSLRERADANAELEKLLKSKNVSSEEFANVACREWMDVRSFGQVFAFKADKSTGGGVSVGVRGPVSIHTATSIDPIDITSMQITKSVNSEAGASRGSDTMGMKHRVDSGVYMFYGSINTQLAEKTGFTNEDADKIKQALITLFENDASSARPEGSLEVHKVFWWEHHSKMGQYSTAKVHRSLLVEKLVEEPKAYTDYQFTVLPLEGLKVEQLDGR
>NZ_CP048209.1|WP_162359657.1|6144326_6146213_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNSSHIGKIEKKHNDQEYTLLPVSHTTQNAHIEVLITEEGEFHSARVVDKDDMSTLIPCTEDAANRAGSKIAPYPLHDKLSYVAGDYTAYGGEVKKEELFPYYINQLREWADSPFAVAKVKSIYGYLSKGSLIRDLVMARVLFADADRRIFDKWDAVAEALHGAKPPLYALVPGDPGSAFVRFNVYSADKLLTDVWKDKEMYDSFIQFYSGKLGDEELCYVSGKRLPSTDKHANKIRNAADKAKLISANDNSGFTFRGRFRTSLEAASISYEVSQKAHNALKWLINRQGMQMDQRVFLVWGNEEPDIPGVTEDMFSISPITVAVKEKKVSTNREFAGEVAKAFAGYRNRLHSPSKANVNILILDSATTGRMAVLYYRNMDKEVYLNRLVKWHSTCAWLHRYRKNEDGNYTQFYGAPATKDIAYAAYGPRAGDKIVKGLMERMLPCIIDERKIPPDIVAGAVQRASNPVAMERWEWEKTLSITCALINRRRGLELSLDAGNNDRDYLFGRLLAVADVLERRALGSEERESNALRYMSAYAKHPARTWRTIQDSLRPYQARLGPKGIYLSKLIDEIGSRMPIEAFTNKPLSDLYLLGFYSQRHELYQSKIHNADDASN
>NZ_CP048209.1|WP_162359658.1|6146209_6146929_-|type-I-C-CRISPR-associated-protein-Cas5
MRNAIEFEVYGNYALFTDPLTKLGGEKLSYQVPTYQALKGIVEAIYWKPTLTIYVDEVRVMNAIRMESKGIRPMEYGGGNTLANYTYLRDVRYQVRAHFEFNMNRPDMAYDRNEHKHHNVLRRSLKIGGRRDIFLGARECQAYVEPCVFGEGEGFYDSYGAIHLGSMVHGLSYPDETGRNQLEARLWNPVMKDGCIQFIRPEQCTQVRVIAEMVAKHFDPLQIESADDLLAQLEEGGNP
>NZ_CP048209.1|WP_162359659.1|6147134_6149570_-|CRISPR-associated-helicase-Cas3'
MNYIAHIRERDKQIQTVEEHLLGVKCIAEQFGKKMGVKHIAGLAGMLHDMGKYTIEFREYIWAAVHDPGSSPKRGSVDHSTAGGKLLFELFHQGTPSRYEWMIAEVVGNAIISHHSYLHDFLNAELRSPYLERTSQKHLKEFEQAKQCFFEHVLNEEAFRHYVAEACRELEAFLLKPSAINVEGKLMYLTKFIFSALIDADRTNTRLFEEDKTMEEESDRKVLFQSYYAKLMGKIDSFPDQTEEFAKARINRLRREMSDRCGQFAERPSGIYTLSIPTGGGKTLASLRYALKHAVEHGKKHVIFIVPYTTIIEQNAQEIRKILKDDPNILEHHTNVIQDANDDDEHEDGMTTMQQKLKLAKDNWDAPVVLTTLVQFLNVFYAKGSRNIRRLHNLCQSVIVFDEVQKVPVSCISLFNQSLNFLKSYGSSSLILCTATQPALDFVQHRLDKHIDAEIIPDLERVVDAFKRVEVVDRATNETFGTDKLADFIVEKINEVQSVLVILNTKTVVKKLYHQLSQSIGSEIPIYHLSTSMCAAHRKDILDQVRGGLNKEKMICISTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGGSEIRHVYVIDHEEESLDHLAEIKAGKGVAKAILVDLNQDRRHHGGSVLSVQAMERYFKAFYSKFESSLNYFIPKLRKDMMELLTADRESNPYNQEYVLENRKSLPLFILNSYRSAAEHFRVIEDRTTSVIVPYGDKGRDVIARLNGGESIDELTRSLREAQQYTIQLFPHEEDKLSKNGGLVSLMDGKVLVVKENAYNDEYGLDLDNDSGYRLSMF
>NZ_CP048209.1|WP_162359660.1|6153137_6154124_-|ABC-transporter-permease
MNNRLLQFSFKYGAIVFIGIVLVFFSLYNEYFLTYNNLADILRSISIVTFVAIGVTISLTVDGFDLSVGSTVSLATVLSATLMVWFQLPLALVIIIPLVFGAIVGLINAFLIVKIRIPDLLATLAVMYIVSGVHKTYTKGYSIYSNMQMQDGTKAPGAITKEFLWIGQGKLFGVPFPVILMIIAVIVAHLFFKYTRLGRQMIMMGGNEEAARLSGLRVKRVRTIAYVASGVLAAIGGILFTARVGNGQIDAGSPMLMEAVASVFVGYSVFGAGRPNIIGTFIGAVLIGVLVNGMTMLNVEYYTTDIIKGAVLVLALAVTFIHLNRRRN
>NZ_CP048209.1|WP_162360703.1|6154120_6155611_-|sugar-ABC-transporter-ATP-binding-protein
MSGIGKSFAGVTALKNVDFELRGGEVHALLGANGAGKSTLMKILSGAYEGDEGTLTIDGETLLVRSPADAKKFGIHCVYQEVDTSLVQHLSVAENIMLDRLAASEGSAWISWGKLNEEAARVLGRLGLRIEVHRSVSELTLAEKQLVLIARLFAQEAKFVILDEPTAPLSIEEAERLFGLMDGLKAAGIGIVFISHRLPEVFRVSDRITVMRDGGVVMNEPAEATNAAAVIRAMLGKSFEEEYPKLPAVIGDPLLETKGLAAGRRVRGVDLSVRSGEIVAVVGLVGAGKTELSRLLFGADVAERGTITLGGKNIIPRSPAEGVEAGIVLVPEERRKEGILVRESVLHNLSLPILRTLGRFGVISGAKEKRHAADTIARLGIKTQSAETAVAFLSGGNQQKVAIGKWTSTDAKVFMFDEPTKGVDVGAKRDIFRIIGELAQQGKGILYLTCEFAEALGLADRILVLCDGEIVRSFDRGEATQEDLLYYASAGKEELA
>NZ_CP048209.1|WP_162359661.1|6155846_6156974_-|sugar-ABC-transporter-substrate-binding-protein
MNKQKRAWLSVTLILAIALVLSACGSKTNNSNGAGNAAANNASSNNAASGDSSSVDTLKGKKIALIMQFNQGTFSAQYVDGVKKQVEKFGGKVTVLASDNDLNKMVSNLDTAINQKYDGILLDHGNADALTSGVNKAVAAHIPVVAFDSGLSVEGVTSLAQNDQMLADKSLEALAKDAGGKGNIVKVWVAGFPPMESRQITYASFLKKYPDIKEIAQFGDASQPQLDAQTRMEAILKQYPEKGSITAVWAAWDEFAKGVTNAIKQAGRTEIKVYGIDMSDEDLALIQDPTSPWVAAAGADPSSIGQVQVRYLYQKLHGDATDATVQIEPVFVSRDALPTDKKLTTADLGEYVQGWGKSEQGNTDYLKELEQAVGK

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Crispr_ID: NZ_CP048209_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_23

6149664-6152278

TypeI

NA:I-C

Consensus_repeat	Method
ATTTCAATCCACGCATCCGCGTAGGGATGCGAC	CRT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	PILER-CR
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CRISPRCasFinder

39 spacers

cas3,cas5,cas8c,cas7,cas4,cas1,cas2

The CRISPR arrays of NZ_CP048209_23

>merge|NZ_CP048209|23|6149664-6152278|CRT,PILER-CR,CRISPRCasFinder
AACGTTATATCCATATCCGCATAGGATGCGACTAGTAACGGTGATTCATCTGGCTGTCGATGTCGAGATTTTCTATGCACGCATTCGTGTAGGATGCGACCTCTGGCGTCACATCTATTGATCGCCCTGTATACATTTAAATCCACGCATCCGTGATAGGATGCGACTGGCATGTCACGTCATATGGGTATGGTCAGACGATTTCAATCCACGCATCCGCGTAGGATGCGGCGGTGTCCCGGTACGCTTCTGACGCGTTCTTCAAATTTCAATCCACGCATCCGCGTAGGATGCGACTTTGCGATTGGATGGAGGAGCAGGAAGAGTAACAAATTTCAATCCACGCATCCGCGTAGGATGCGACCGTTCCTCGATTCGAAATAACGAGATCGGATAACCATTTCAATCCACGCATCCGCGTAGGATGCGACTGCATAAATTCGATGCCACGCTGGGCACTGATTGATTTCAATCCACGCATCCGCGTAGGATGCGACGTCTTCCGGTATTTTGTTCTTTTTGATTATCGCAATTTCAATCCACGCATCCGCGTAGGATGCGACATGACGCACCAACGCTGCTCGGCCTCGTTGGCATATTTCAATCCACGCATCCGCGTAGGATGCGACTTCGATCATTTGCATCATCCGGCCATATTGCCATATTTCAATCCACGCATCCGCGTAGGATGCGACGGATCGCAACCAAATCGATTTTGCGGGTATCGACATTTCAATCCACGCATCCGCGTAGGATGCGACGCGGCACATAGAGCGGCACGAACCGAGAGTAAAATTTCAATCCACGCATCCGCGTAGGATGCGACGCATTAACTCCCTTCTGCATATACTTCGTATTATAATTTCAATCCACGCATCCGCGTAGGATGCGACATCAACTCCATATCCTGCAAATCCTCAAGCAAATCATTTCAATCCACGCATCCGCGTAGGATGCGACCGATCGAAACACGCACGATCAGTGATTTGTCCGAATTTCAATCCACGCATCCGCGTAGGATGCGACCCGATCTTCATGACCGCTTGCCCGTGATCAGGAGATTTCAATCCACGCATCCGCGTAGGATGCGACGATCAAGTTCGGGGAGTATTTCGCGCGGGTGGCGATTTCAATCCACGCATCCGCGTAGGATGCGACTCTGAAACCAAATTCAAGAGGATCGGGTCGATGGGATTTCAATCCACGCATCCGCGTAGGATGCGACCGCTGGCATGGCTGGGTTCAGATCAGAGAGCATAATTTCAATCCACGCATCCGCGTAGGATGCGACGGGCATTGGGCGTTACAAGGATACGCGGAGCCAAATTTCAATCCACGCATCCGCGTAGGATGCGACTGTCAGTCTTGCATCATTGTCCGCCGCCCGATTAAAATTTCAATCCACGCATCCGCGTAGGATGCGACATCTATCGCGGCTGACCGCAGGACTGGAAGGGGCGATTTCAATCCACGCATCCGCGTAGGATGCGACATTAGGTTGAGCATACCTGGCGATGGGTTTTACGATTTCAATCCACGCATCCGCGTAGGATGCGACTCGATCCGGCAAGGCAATCAAGGGCAAAATATCCATTTCAATCCACGCATCCGCGTAGGATGCGACACTCGGTAACGTTACATTAAATGTCGTTTACAGCATTTCAATCCACGCATCCGCGTAGGATGCGACACGCCGTCTACCGCTAACCAGACGATACCATGGGATTTCAATCCACGCATCCGCGTAGGATGCGACGTTCAAAGTCCCGAAGAAGTAATCAGGTTCATAATTTCAATCCACGCATCCGCGTAGGATGCGACTTCACAACATGAACATTTTGAGGCGGACTAGGAGATTTCAATCCACGCATCCGCGTAGGATGCGACTTTCGCCAGAAACAGGTTTGGCAATGGCAACGATATTTCAATCCACGCATCCGCGTAGGATGCGACTATGGCAAACGCCGATATAGGGAGCGTGCATGAATTTCAATCCACGCATCCGCGTAGGATGCGACGTTTACGCGGGACAGAGTCCGTGGAAATTAGTAGATTTCAATCCACGCATCCGCGTAGGATGCGACTTAAAGCGGCGGATATGATCGCGGATGAGATGGAATTTCAATCCACGCATCCGCGTAGGATGCGACCGCAGAAGCGAGGAAATAAGACGTCCATAACAGAATTTCAATCCACGCATCCGCGTAGGATGCGACGGAAATCGAGCGGCTTCGCGGATTGTATGAGCAGATTTCAATCCACGCATCCGCGTAGGATGCGACTTGAACCTGTGATCTCGTTTATCGATGACGACGGTATTTCAATCCACGCATCCGCGTAGGATGCGACTTACGATCAGTATATTAGGTATGTGAAATCCGATGATTTCAATCCACGCATCCGCGTAGGATGCGACACAAATATCCGGTGACAATAACTACGCACTCGAAATTTCAATCCACGCATCCGCGTAGGATGCGACGGTCCACGCGCTTACTACTGTCCCGGCTGTCGAGAGATTTCAATCCACGCATCCGCGTAGGATGCGACTTGGACGCCCTGGAAGAGTGGGCGGCAAAACGAATTTCAATCCACGCATCCGCGTAGGATGCGAC

>NZ_CP048209|23|4|6149664-6152278|CRT
AACGTTATATCCATATCCGCATAGGATGCGAC	TAGTAACGGTGATTCATCTGGCTGTCGATGTCGAGA
TTTTCTATGCACGCATTCGTGTAGGATGCGAC	CTCTGGCGTCACATCTATTGATCGCCCTGTATACA
TTTAAATCCACGCATCCGTGATAGGATGCGAC	TGGCATGTCACGTCATATGGGTATGGTCAGACG
ATTTCAATCCACGCATCCGCGTAGGATGCGGC	GGTGTCCCGGTACGCTTCTGACGCGTTCTTCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTGCGATTGGATGGAGGAGCAGGAAGAGTAACAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGTTCCTCGATTCGAAATAACGAGATCGGATAACC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGCATAAATTCGATGCCACGCTGGGCACTGATTG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTCTTCCGGTATTTTGTTCTTTTTGATTATCGCA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATGACGCACCAACGCTGCTCGGCCTCGTTGGCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCGATCATTTGCATCATCCGGCCATATTGCCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGATCGCAACCAAATCGATTTTGCGGGTATCGAC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCGGCACATAGAGCGGCACGAACCGAGAGTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCATTAACTCCCTTCTGCATATACTTCGTATTATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCAACTCCATATCCTGCAAATCCTCAAGCAAATC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGATCGAAACACGCACGATCAGTGATTTGTCCGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CCGATCTTCATGACCGCTTGCCCGTGATCAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GATCAAGTTCGGGGAGTATTTCGCGCGGGTGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCTGAAACCAAATTCAAGAGGATCGGGTCGATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCTGGCATGGCTGGGTTCAGATCAGAGAGCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGGCATTGGGCGTTACAAGGATACGCGGAGCCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGTCAGTCTTGCATCATTGTCCGCCGCCCGATTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCTATCGCGGCTGACCGCAGGACTGGAAGGGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATTAGGTTGAGCATACCTGGCGATGGGTTTTACG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCGATCCGGCAAGGCAATCAAGGGCAAAATATCC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACTCGGTAACGTTACATTAAATGTCGTTTACAGC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACGCCGTCTACCGCTAACCAGACGATACCATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTCAAAGTCCCGAAGAAGTAATCAGGTTCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCACAACATGAACATTTTGAGGCGGACTAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TATGGCAAACGCCGATATAGGGAGCGTGCATGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTTACGCGGGACAGAGTCCGTGGAAATTAGTAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTAAAGCGGCGGATATGATCGCGGATGAGATGGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCAGAAGCGAGGAAATAAGACGTCCATAACAGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGAAATCGAGCGGCTTCGCGGATTGTATGAGCAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGAACCTGTGATCTCGTTTATCGATGACGACGGT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTACGATCAGTATATTAGGTATGTGAAATCCGATG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACAAATATCCGGTGACAATAACTACGCACTCGAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGTCCACGCGCTTACTACTGTCCCGGCTGTCGAGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGGACGCCCTGGAAGAGTGGGCGGCAAAACGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC

>NZ_CP048209|23|4|6149864-6152278|PILER-CR
ATTTCAATCCACGCATCCGCGTAGGATGCGGC	GGTGTCCCGGTACGCTTCTGACGCGTTCTTCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTGCGATTGGATGGAGGAGCAGGAAGAGTAACAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGTTCCTCGATTCGAAATAACGAGATCGGATAACC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGCATAAATTCGATGCCACGCTGGGCACTGATTG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTCTTCCGGTATTTTGTTCTTTTTGATTATCGCA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATGACGCACCAACGCTGCTCGGCCTCGTTGGCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCGATCATTTGCATCATCCGGCCATATTGCCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGATCGCAACCAAATCGATTTTGCGGGTATCGAC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCGGCACATAGAGCGGCACGAACCGAGAGTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCATTAACTCCCTTCTGCATATACTTCGTATTATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCAACTCCATATCCTGCAAATCCTCAAGCAAATC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGATCGAAACACGCACGATCAGTGATTTGTCCGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CCGATCTTCATGACCGCTTGCCCGTGATCAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GATCAAGTTCGGGGAGTATTTCGCGCGGGTGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCTGAAACCAAATTCAAGAGGATCGGGTCGATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCTGGCATGGCTGGGTTCAGATCAGAGAGCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGGCATTGGGCGTTACAAGGATACGCGGAGCCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGTCAGTCTTGCATCATTGTCCGCCGCCCGATTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCTATCGCGGCTGACCGCAGGACTGGAAGGGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATTAGGTTGAGCATACCTGGCGATGGGTTTTACG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCGATCCGGCAAGGCAATCAAGGGCAAAATATCC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACTCGGTAACGTTACATTAAATGTCGTTTACAGC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACGCCGTCTACCGCTAACCAGACGATACCATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTCAAAGTCCCGAAGAAGTAATCAGGTTCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCACAACATGAACATTTTGAGGCGGACTAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TATGGCAAACGCCGATATAGGGAGCGTGCATGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTTACGCGGGACAGAGTCCGTGGAAATTAGTAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTAAAGCGGCGGATATGATCGCGGATGAGATGGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCAGAAGCGAGGAAATAAGACGTCCATAACAGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGAAATCGAGCGGCTTCGCGGATTGTATGAGCAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGAACCTGTGATCTCGTTTATCGATGACGACGGT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTACGATCAGTATATTAGGTATGTGAAATCCGATG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACAAATATCCGGTGACAATAACTACGCACTCGAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGTCCACGCGCTTACTACTGTCCCGGCTGTCGAGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGGACGCCCTGGAAGAGTGGGCGGCAAAACGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC

>NZ_CP048209|23|20|6149864-6152278|CRISPRCasFinder
ATTTCAATCCACGCATCCGCGTAGGATGCGGC	GGTGTCCCGGTACGCTTCTGACGCGTTCTTCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTGCGATTGGATGGAGGAGCAGGAAGAGTAACAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGTTCCTCGATTCGAAATAACGAGATCGGATAACC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGCATAAATTCGATGCCACGCTGGGCACTGATTG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTCTTCCGGTATTTTGTTCTTTTTGATTATCGCA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATGACGCACCAACGCTGCTCGGCCTCGTTGGCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCGATCATTTGCATCATCCGGCCATATTGCCAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGATCGCAACCAAATCGATTTTGCGGGTATCGAC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCGGCACATAGAGCGGCACGAACCGAGAGTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GCATTAACTCCCTTCTGCATATACTTCGTATTATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCAACTCCATATCCTGCAAATCCTCAAGCAAATC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGATCGAAACACGCACGATCAGTGATTTGTCCGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CCGATCTTCATGACCGCTTGCCCGTGATCAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GATCAAGTTCGGGGAGTATTTCGCGCGGGTGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCTGAAACCAAATTCAAGAGGATCGGGTCGATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCTGGCATGGCTGGGTTCAGATCAGAGAGCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGGCATTGGGCGTTACAAGGATACGCGGAGCCAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TGTCAGTCTTGCATCATTGTCCGCCGCCCGATTAAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATCTATCGCGGCTGACCGCAGGACTGGAAGGGGCG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ATTAGGTTGAGCATACCTGGCGATGGGTTTTACG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TCGATCCGGCAAGGCAATCAAGGGCAAAATATCC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACTCGGTAACGTTACATTAAATGTCGTTTACAGC
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACGCCGTCTACCGCTAACCAGACGATACCATGGG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTCAAAGTCCCGAAGAAGTAATCAGGTTCATA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTCACAACATGAACATTTTGAGGCGGACTAGGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTTCGCCAGAAACAGGTTTGGCAATGGCAACGAT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TATGGCAAACGCCGATATAGGGAGCGTGCATGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GTTTACGCGGGACAGAGTCCGTGGAAATTAGTAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTAAAGCGGCGGATATGATCGCGGATGAGATGGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	CGCAGAAGCGAGGAAATAAGACGTCCATAACAGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGAAATCGAGCGGCTTCGCGGATTGTATGAGCAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGAACCTGTGATCTCGTTTATCGATGACGACGGT
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTACGATCAGTATATTAGGTATGTGAAATCCGATG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	ACAAATATCCGGTGACAATAACTACGCACTCGAA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	GGTCCACGCGCTTACTACTGTCCCGGCTGTCGAGAG
ATTTCAATCCACGCATCCGCGTAGGATGCGAC	TTGGACGCCCTGGAAGAGTGGGCGGCAAAACGA
ATTTCAATCCACGCATCCGCGTAGGATGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162354589.1\|6139841_6140255_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162359660.1\|6153137_6154124_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_CP048209.1\|WP_162359664.1\|6160682_6161732_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350126
NZ_CP048209.1\|WP_162359661.1\|6155846_6156974_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380528
NZ_CP048209.1\|WP_162360702.1\|6141466_6141757_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP048209.1\|WP_162359658.1\|6146209_6146929_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09752_cas5_CAS-I-C	gnl\|CDD\|273847
NZ_CP048209.1\|WP_162359656.1\|6143443_6144310_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	COG3649_cas7_CAS-I-C	gnl\|CDD\|226175
NZ_CP048209.1\|WP_162359654.1\|6141766_6142798_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP048209.1\|WP_162359659.1\|6147134_6149570_-\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP048209.1\|WP_162359655.1\|6142794_6143454_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP048209.1\|WP_162359666.1\|6163639_6164401_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048209.1\|WP_162359653.1\|6135642_6137265_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP048209.1\|WP_162359662.1\|6158004_6158739_-\|trehalose-utilization-protein-ThuA	unknown	unknown	gnl\|CDD\|227150
NZ_CP048209.1\|WP_162359657.1\|6144326_6146213_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|187887
NZ_CP048209.1\|WP_162359665.1\|6161926_6162820_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP048209.1\|WP_162360705.1\|6162913_6163231_-\|DUF3888-domain-containing-protein	unknown	unknown	gnl\|CDD\|379024
NZ_CP048209.1\|WP_162360703.1\|6154120_6155611_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP048209.1\|WP_162360701.1\|6137630_6138500_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162360704.1\|6157145_6157700_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350620
NZ_CP048209.1\|WP_162359663.1\|6158924_6159845_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162359664.1\|6160682_6161732_-\|hypothetical-protein	gnl\|CDD\|350126	cd18614, GH130, Glycosyl hydrolase family 130; uncharacterized. This subfamily contains glycosyl hydrolase family 130 (GH130) proteins, as classified by the carbohydrate-active enzymes database (CAZY), most of which are as yet uncharacterized. GH130 enzymes are phosphorylases and hydrolases for beta-mannosides, and include beta-1,4-mannosylglucose phosphorylase (EC 2.4.1.281), beta-1,4-mannooligosaccharide phosphorylase (EC 2.4.1.319), beta-1,4-mannosyl-N-acetyl-glucosamine phosphorylase (EC 2.4.1.320), beta-1,2-mannobiose phosphorylase (EC 2.4.1.-), beta-1,2-oligomannan phosphorylase (EC 2.4.1.-) and beta-1,2-mannosidase (EC 3.2.1.-). They possess 5-bladed beta-propeller domains similar to families 32, 43, 62, 68, 117 (GH32, GH43, GH62, GH68, GH117). GH130 enzymes are involved in the bacterial utilization of mannans or N-linked glycans. Beta-1,4-mannosylglucose phosphorylase is involved in degradation of beta-1,4-D-mannosyl-N-acetyl-D-glucosamine linkages in the core of N-glycans; it produces alpha-mannose 1-phosphate and glucose from 4-O-beta-D-mannosyl-D-glucose and inorganic phosphate, using a critical catalytic Asp as a proton donor.	3.4268e-12
NZ_CP048209.1\|WP_162359661.1\|6155846_6156974_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380528	cd06305, PBP1_methylthioribose_binding-like, similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily. Proteins similar to methylthioribose-binding protein of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.	5.27396e-107
NZ_CP048209.1\|WP_162360702.1\|6141466_6141757_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.96999e-30
NZ_CP048209.1\|WP_162359658.1\|6146209_6146929_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|273847	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This small Cas family is represented by CT1134 of Chlorobium tepidum. This family belongs to a set of several Cas protein families, one each for a number of different CRISPR/Cas subtypes, that share a region of N-terminal sequence similarity modeled by TIGR02593. This family represents the Dvulg subtype of CRISPR/Cas locus.	2.63649e-95
NZ_CP048209.1\|WP_162359660.1\|6153137_6154124_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	5.27139e-76
NZ_CP048209.1\|WP_162359656.1\|6143443_6144310_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|226175	COG3649, COG3649, CRISPR system related protein [Defense mechanisms].	2.28492e-128
NZ_CP048209.1\|WP_162359659.1\|6147134_6149570_-\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.08168e-70
NZ_CP048209.1\|WP_162359655.1\|6142794_6143454_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.92949e-28
NZ_CP048209.1\|WP_162360705.1\|6162913_6163231_-\|DUF3888-domain-containing-protein	gnl\|CDD\|379024	pfam13027, DUF3888, Protein of unknown function (DUF3888). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 111 and 149 amino acids in length.	2.88983e-12
NZ_CP048209.1\|WP_162359666.1\|6163639_6164401_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.32905e-09
NZ_CP048209.1\|WP_162359653.1\|6135642_6137265_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.30724e-57
NZ_CP048209.1\|WP_162359662.1\|6158004_6158739_-\|trehalose-utilization-protein-ThuA	gnl\|CDD\|227150	COG4813, ThuA, Trehalose utilization protein [Carbohydrate transport and metabolism].	4.22488e-133
NZ_CP048209.1\|WP_162359657.1\|6144326_6146213_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|187887	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Zn-finger domain containing protein, distant homologs of Cas8 proteins; signature gene for I-C subtype; also known as Csd1 family.	3.6188e-171
NZ_CP048209.1\|WP_162359665.1\|6161926_6162820_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.94026e-26
NZ_CP048209.1\|WP_162359654.1\|6141766_6142798_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	0
NZ_CP048209.1\|WP_162360703.1\|6154120_6155611_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_CP048209.1\|WP_162360701.1\|6137630_6138500_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.33828e-27
NZ_CP048209.1\|WP_162360704.1\|6157145_6157700_-\|M15-family-metallopeptidase	gnl\|CDD\|350620	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	4.48309e-50
NZ_CP048209.1\|WP_162359663.1\|6158924_6159845_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	5.41511e-23

>NZ_CP048209.1|WP_162359659.1|6147134_6149570_-|CRISPR-associated-helicase-Cas3'
MNYIAHIRERDKQIQTVEEHLLGVKCIAEQFGKKMGVKHIAGLAGMLHDMGKYTIEFREYIWAAVHDPGSSPKRGSVDHSTAGGKLLFELFHQGTPSRYEWMIAEVVGNAIISHHSYLHDFLNAELRSPYLERTSQKHLKEFEQAKQCFFEHVLNEEAFRHYVAEACRELEAFLLKPSAINVEGKLMYLTKFIFSALIDADRTNTRLFEEDKTMEEESDRKVLFQSYYAKLMGKIDSFPDQTEEFAKARINRLRREMSDRCGQFAERPSGIYTLSIPTGGGKTLASLRYALKHAVEHGKKHVIFIVPYTTIIEQNAQEIRKILKDDPNILEHHTNVIQDANDDDEHEDGMTTMQQKLKLAKDNWDAPVVLTTLVQFLNVFYAKGSRNIRRLHNLCQSVIVFDEVQKVPVSCISLFNQSLNFLKSYGSSSLILCTATQPALDFVQHRLDKHIDAEIIPDLERVVDAFKRVEVVDRATNETFGTDKLADFIVEKINEVQSVLVILNTKTVVKKLYHQLSQSIGSEIPIYHLSTSMCAAHRKDILDQVRGGLNKEKMICISTQLIEAGVDISFDCVIRSLAGLDSIAQAAGRCNRHGGSEIRHVYVIDHEEESLDHLAEIKAGKGVAKAILVDLNQDRRHHGGSVLSVQAMERYFKAFYSKFESSLNYFIPKLRKDMMELLTADRESNPYNQEYVLENRKSLPLFILNSYRSAAEHFRVIEDRTTSVIVPYGDKGRDVIARLNGGESIDELTRSLREAQQYTIQLFPHEEDKLSKNGGLVSLMDGKVLVVKENAYNDEYGLDLDNDSGYRLSMF
>NZ_CP048209.1|WP_162359658.1|6146209_6146929_-|type-I-C-CRISPR-associated-protein-Cas5
MRNAIEFEVYGNYALFTDPLTKLGGEKLSYQVPTYQALKGIVEAIYWKPTLTIYVDEVRVMNAIRMESKGIRPMEYGGGNTLANYTYLRDVRYQVRAHFEFNMNRPDMAYDRNEHKHHNVLRRSLKIGGRRDIFLGARECQAYVEPCVFGEGEGFYDSYGAIHLGSMVHGLSYPDETGRNQLEARLWNPVMKDGCIQFIRPEQCTQVRVIAEMVAKHFDPLQIESADDLLAQLEEGGNP
>NZ_CP048209.1|WP_162359657.1|6144326_6146213_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MSWLLNLYETYESNSSHIGKIEKKHNDQEYTLLPVSHTTQNAHIEVLITEEGEFHSARVVDKDDMSTLIPCTEDAANRAGSKIAPYPLHDKLSYVAGDYTAYGGEVKKEELFPYYINQLREWADSPFAVAKVKSIYGYLSKGSLIRDLVMARVLFADADRRIFDKWDAVAEALHGAKPPLYALVPGDPGSAFVRFNVYSADKLLTDVWKDKEMYDSFIQFYSGKLGDEELCYVSGKRLPSTDKHANKIRNAADKAKLISANDNSGFTFRGRFRTSLEAASISYEVSQKAHNALKWLINRQGMQMDQRVFLVWGNEEPDIPGVTEDMFSISPITVAVKEKKVSTNREFAGEVAKAFAGYRNRLHSPSKANVNILILDSATTGRMAVLYYRNMDKEVYLNRLVKWHSTCAWLHRYRKNEDGNYTQFYGAPATKDIAYAAYGPRAGDKIVKGLMERMLPCIIDERKIPPDIVAGAVQRASNPVAMERWEWEKTLSITCALINRRRGLELSLDAGNNDRDYLFGRLLAVADVLERRALGSEERESNALRYMSAYAKHPARTWRTIQDSLRPYQARLGPKGIYLSKLIDEIGSRMPIEAFTNKPLSDLYLLGFYSQRHELYQSKIHNADDASN
>NZ_CP048209.1|WP_162359656.1|6143443_6144310_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MATLSKKIDFAVILSVTKANPNGDPLNGNRPRQNYDGHGEISDVALKRKIRNRLQDMGESIFVQSNDRKSDAFNSLRERADANAELEKLLKSKNVSSEEFANVACREWMDVRSFGQVFAFKADKSTGGGVSVGVRGPVSIHTATSIDPIDITSMQITKSVNSEAGASRGSDTMGMKHRVDSGVYMFYGSINTQLAEKTGFTNEDADKIKQALITLFENDASSARPEGSLEVHKVFWWEHHSKMGQYSTAKVHRSLLVEKLVEEPKAYTDYQFTVLPLEGLKVEQLDGR
>NZ_CP048209.1|WP_162359655.1|6142794_6143454_-|CRISPR-associated-protein-Cas4
MADKDDEDFLLLSGIQHYQFCKRQWALIHIEQQWAENVRTIEGEHLHRKVDQPFTREKRGDRLVVRAMPVKSERLQLTGVCDVVEFVRNESGVEVHGADGRYIPYPVEYKRGKPKRNEEDILQLAAQAICLEEMTLCNVDSGFIFYNEIKHRIEVELTEAIKHKVRLVVAQMQDYYKRRYTPRVTPGSFCQSCSLLHICMPEMMTKRSVKSYVEGKIKE
>NZ_CP048209.1|WP_162359654.1|6141766_6142798_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MKKLLNTLFITQSDVYLSLDGDNIVLLKDEEKLGRLPLHNLESIISFGYTGASPALMGYCAERNISISFYTANGRFLARVIGESRGNVVLRKRQYALSEDELQSALIARNFIIGKIYNHKWMIERMTRDYPMRIDVSHFKTVSQQLSGFIKEVRECDNLQRLRGLEGLAAVCYNKLLDAMILQQKEDFYFHSRSRRPPLDNVNAMLSFAYSLLANDVAAALEGVGLDAYVGFLHRDRPGRASLALDMMEELRGVYADRFVLSLINKRVVNKDDFLTKENGAVLMKDEARKKFLTAWQAKKQEKISHPYLSENISWGLVMHAQALLLARYLRNDLDEYPPFLWK
>NZ_CP048209.1|WP_162360702.1|6141466_6141757_-|CRISPR-associated-endonuclease-Cas2
MLVLVTYDVNTTSNTGQRRLRQVSKICQNVGQRVQNSVFECVVDAAQLAQLKLKLLEVIDVHQDSLRFYQLGNNYKNKVEHVGAKASIDLEGPLIL
>NZ_CP048209.1|WP_162354589.1|6139841_6140255_+|hypothetical-protein
MDNGRCAISIHASARDATERIPATAATLLQFQSTHPHGMRLKAKIKRNLSDDFNPRIRTGCDLGERFITKSAQDFNPRIRTGCDFARNRFGNGNDISIHASARDATVSVLMDTGKVTEFQSTHPHGMRPVVLERFRQ
>NZ_CP048209.1|WP_162360701.1|6137630_6138500_-|sugar-phosphate-isomerase/epimerase
MNVKLGMRIPPKIGAEGMEFTAKLAKQAGLDVLDLPRLTPEWKAACEAEGLGFGTIDAHYTGQLLSRDDARRANAVESAKKEISDIAALGGRVLFMCLVPEDHTLPRKEGFELFKDSFPEVVKHAEQQGVYIAIEGWPGPAPHYPTLGCTPEMWRAMFNAIPSRHFGLNYDPSHMVRLGIDYIRALGEFGERINHVHGKDTEILHDELYECGVLEATFGAKYGFSEGSWRYTIPGHGEVDWGKVAVRLERLGYQGAVSIELEDHRFWGSLEAEKQGIETAARHLEKYFK
>NZ_CP048209.1|WP_162359653.1|6135642_6137265_-|response-regulator
MFSLLVVEDEQWIRRGLCETIDWANEGIRLSGEAADGEEAMRFMESHSPDIVITDIVMPGMDGITFLKSLREQKMSSEVIIMSGYSDFEYARTALKNGAFDYVLKPIHEQNMLSVIRRCVQELKQKRQAESEMNRLARSARETLFLARQRLFDMLLTEAPYSPGWLTEQMKALQVELEPGRIRTFVAKIVDWGDKAENDRDRALMLYALCNMLEETGSRFGPAVAFPIHNGKTSGEADVAMLHTDNGSAGGGQPGVAGELPGLIEEVGRMLGLRISVGYSREADIGRLSVMLEEALHAAAHWFYEGGGSLRGAESLASAMQTDLPYCGPAGWDGRFASALRMADAKLIEQLVRELGEHIRASRASHLPLTIRRGLKLLFQNVNQKCDALHRRSQCGEPAASEPLKLPPATADAFENVLLENLSRAMPGDRPVRNRKWIVERALQYIEANRGKIVTMNDVAAHLYLNHSYFSKIFREEMGETFSKYVLQSRIETAKRLLKETPLKIYEIAGQLGYTDIRHFTKMFKESEGITPAQFRDYGL
>NZ_CP048209.1|WP_162359660.1|6153137_6154124_-|ABC-transporter-permease
MNNRLLQFSFKYGAIVFIGIVLVFFSLYNEYFLTYNNLADILRSISIVTFVAIGVTISLTVDGFDLSVGSTVSLATVLSATLMVWFQLPLALVIIIPLVFGAIVGLINAFLIVKIRIPDLLATLAVMYIVSGVHKTYTKGYSIYSNMQMQDGTKAPGAITKEFLWIGQGKLFGVPFPVILMIIAVIVAHLFFKYTRLGRQMIMMGGNEEAARLSGLRVKRVRTIAYVASGVLAAIGGILFTARVGNGQIDAGSPMLMEAVASVFVGYSVFGAGRPNIIGTFIGAVLIGVLVNGMTMLNVEYYTTDIIKGAVLVLALAVTFIHLNRRRN
>NZ_CP048209.1|WP_162360703.1|6154120_6155611_-|sugar-ABC-transporter-ATP-binding-protein
MSGIGKSFAGVTALKNVDFELRGGEVHALLGANGAGKSTLMKILSGAYEGDEGTLTIDGETLLVRSPADAKKFGIHCVYQEVDTSLVQHLSVAENIMLDRLAASEGSAWISWGKLNEEAARVLGRLGLRIEVHRSVSELTLAEKQLVLIARLFAQEAKFVILDEPTAPLSIEEAERLFGLMDGLKAAGIGIVFISHRLPEVFRVSDRITVMRDGGVVMNEPAEATNAAAVIRAMLGKSFEEEYPKLPAVIGDPLLETKGLAAGRRVRGVDLSVRSGEIVAVVGLVGAGKTELSRLLFGADVAERGTITLGGKNIIPRSPAEGVEAGIVLVPEERRKEGILVRESVLHNLSLPILRTLGRFGVISGAKEKRHAADTIARLGIKTQSAETAVAFLSGGNQQKVAIGKWTSTDAKVFMFDEPTKGVDVGAKRDIFRIIGELAQQGKGILYLTCEFAEALGLADRILVLCDGEIVRSFDRGEATQEDLLYYASAGKEELA
>NZ_CP048209.1|WP_162359661.1|6155846_6156974_-|sugar-ABC-transporter-substrate-binding-protein
MNKQKRAWLSVTLILAIALVLSACGSKTNNSNGAGNAAANNASSNNAASGDSSSVDTLKGKKIALIMQFNQGTFSAQYVDGVKKQVEKFGGKVTVLASDNDLNKMVSNLDTAINQKYDGILLDHGNADALTSGVNKAVAAHIPVVAFDSGLSVEGVTSLAQNDQMLADKSLEALAKDAGGKGNIVKVWVAGFPPMESRQITYASFLKKYPDIKEIAQFGDASQPQLDAQTRMEAILKQYPEKGSITAVWAAWDEFAKGVTNAIKQAGRTEIKVYGIDMSDEDLALIQDPTSPWVAAAGADPSSIGQVQVRYLYQKLHGDATDATVQIEPVFVSRDALPTDKKLTTADLGEYVQGWGKSEQGNTDYLKELEQAVGK
>NZ_CP048209.1|WP_162360704.1|6157145_6157700_-|M15-family-metallopeptidase
MMLASIAGLIIIHSPAKERIWPGIAGEETPAPKSAAMPVESLHPVVSAKMMELIRRTSKAGITILITDGFRSSLEQDALYKQGRTAKGQIVTNVKGGESYHNYGLAIDFALRVPNGDVIWDLDYDGNRNGESDWMEVVAIAKSLGFAWGGDWTSFKDYPHLQMDFGYSISELKRGKRPPDDSQP
>NZ_CP048209.1|WP_162359662.1|6158004_6158739_-|trehalose-utilization-protein-ThuA
MTQKINVTIWNEYRHEKTNKAVSDVYPQGMHAAIAEGLNVQGEIRFATLDDPEHGLSEDVLNNTDVLIWWGHMAHHEVDDAIVERVHNRVLHGMGLIVLHSGHFSKIFRKLMGTSCDLKWREADEKERIWIVNPAHPIAAGLGEYIELPAEEMYGEHFDIPQPDDLVMVSWFEGGEVFRSGCCYNRGAGKVFYFRPGHETYPTYFNPEVRKVIDNAVKWAAPVEREYPKYGHAKTPLEPIKDKH
>NZ_CP048209.1|WP_162359663.1|6158924_6159845_+|AraC-family-transcriptional-regulator
MPVNLHHEHVAYQNPFLAIKIWRIDEDRKLPQARRPDEPKPAFASWNYHDEIEFLFILRGELVAYYGDEQLTLRKGDVALFGSAEPHLTLQREDSPLSYLVLQLNLRTYWDQSTMNNMMHFAETIRPLSALNYMFSENREARSGIAALIRDIYKEMNARQIGYELAVSSRIKMMLLLLLRHDSRKMLHYHDHLLYERLRPAINHIEEHMSEKLSAETVSGLLNMSATHFMKTFKKAFGMTFIEFVVYKRIKRAEQLLLTSDISIAEAAAAVGMSNLGHFYQLFNRLNGCSPKQFRDRLRTDAAARV
>NZ_CP048209.1|WP_162359664.1|6160682_6161732_-|hypothetical-protein
MSNHSFTSILVRAMPGRYSEVKKRRSSTISEQLWNLFGGNYRHNCLSWHHSARNPVIPASGDTWRSVWVANPDVLTFNGKQLLYYRGNGIMPGTDGQRHDRLGVAEIVGLTRDTISLRDLNGGEPIVDVGGPDEFDGKDVLDPSAVEFGGRVFVYYSAVGAGPDCVGLAVSDDGVNFAKVGNIMEGRAPAAIVKDGFVYMIYQLLQNNGYRLYLARSRDGIHFEQVSEQSIFEGTPGNWDALSIVTARLTKDGDSFYMMYGGSSYLADEPDFFGLARSTDLLHWEPHPGNPIFGCGAMGEEDGGAIWFPALLETESEFVILYEGSRGKYSWDISSQICMSSIPKQSAGM
>NZ_CP048209.1|WP_162359665.1|6161926_6162820_+|AraC-family-transcriptional-regulator
MPLQDLIVRIPPLPHYLTAGEDVFMPGERHVERQHIGVFDLIVVSRGALFMGESGEDVRVGAGQALILRPDLHHYPAKPCEEETHFYWIHFQAHAPWSEPGERPAAELTARWSAEHASPGDYGRQYDLRLPRFGTLPQPQDVYGEIEGLLALSDQADLAGSWKQQTVFHQLLFRLCGEAQQIRTDSAAVKLAERTASYLKTNYRVPITNELLRTELNYHPIYITRCMRAVYGRTPNEYVNEYRLEQAKLLLLTTDKPVAEIAAAVGFEDPAYFARRFAQTAGMSPSAYRKQFEARGG
>NZ_CP048209.1|WP_162360705.1|6162913_6163231_-|DUF3888-domain-containing-protein
MLLLLLLPHMEHELAKGYADVLKSPPMLYPYYVDVVNTERLNGFRGFSLRIVLDAVPTVGPHIAVGEDKFTFDISPIADVKLVRYEHVKGPDPSSFPPNYKDLLK
>NZ_CP048209.1|WP_162359666.1|6163639_6164401_-|GNAT-family-N-acetyltransferase
MDVSNRSSVVQTVKTVLAASLSCAEEDLLRERVSIHPAQSREGRLRFPIRNPSLTIATMGSGAVVACSRDRFAWAEEQLGSLSRGQLFSAQTAAKLQALVEPDAQFMAGPDQKYVCSAEELAAYRIPEGVRVAMYEDGEIASLYRHAAFTHALGFRADSPRPDRLAAAAEWNGKIVGIAGASEDCEHMWQIGVDVLPECQGRGIGQAIVGTLTKAILAKGIVPYYSTEVSNLRSRQLAVRLGFWPAWVEMYAR

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Crispr_ID: NZ_CP048209_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_24

6523586-6523691

Orphan

Consensus_repeat	Method
GAGAACAAAATCGCTTCGGAAGCATACGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_24

>merge|NZ_CP048209|24|6523586-6523691|CRISPRCasFinder
GAGAACAAAATCGCTTCGGAAGCATACGCTAAGATTTTGTTTGAAAGCGAAGCTTCGAGGATATGCAATCCGAGAGGAGAACAAAATCGCTTCGGAAGCATACGCT

>NZ_CP048209|24|21|6523586-6523691|CRISPRCasFinder
GAGAACAAAATCGCTTCGGAAGCATACGCT	AAGATTTTGTTTGAAAGCGAAGCTTCGAGGATATGCAATCCGAGAG
GAGAACAAAATCGCTTCGGAAGCATACGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162360065.1\|6518082_6519231_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|223458
NZ_CP048209.1\|WP_162360069.1\|6522283_6523531_-\|serine-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|234571
NZ_CP048209.1\|WP_162360067.1\|6520060_6521119_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226728
NZ_CP048209.1\|WP_162360077.1\|6530856_6536181_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|164795
NZ_CP048209.1\|WP_162360064.1\|6517641_6517893_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360068.1\|6521288_6522080_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048209.1\|WP_162360730.1\|6537107_6538199_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	unknown	unknown	gnl\|CDD\|236467
NZ_CP048209.1\|WP_162360078.1\|6538727_6539801_-\|peptide-chain-release-factor-1	unknown	unknown	gnl\|CDD\|234801
NZ_CP048209.1\|WP_162360076.1\|6529263_6530049_-\|stage-II-sporulation-protein-R	unknown	unknown	gnl\|CDD\|378205
NZ_CP048209.1\|WP_162360072.1\|6525066_6525648_-\|low-molecular-weight-protein-arginine-phosphatase	unknown	unknown	gnl\|CDD\|319972
NZ_CP048209.1\|WP_162360061.1\|6515029_6515578_-\|F0F1-ATP-synthase-subunit-delta	unknown	unknown	gnl\|CDD\|365949
NZ_CP048209.1\|WP_162360073.1\|6525678_6526239_-\|manganese-efflux-pump	unknown	unknown	gnl\|CDD\|308338
NZ_CP048209.1\|WP_162360062.1\|6515574_6516057_-\|F0F1-ATP-synthase-subunit-B	unknown	unknown	gnl\|CDD\|180240
NZ_CP048209.1\|WP_162360075.1\|6527730_6529197_+\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP048209.1\|WP_162360070.1\|6523709_6524321_-\|TIGR01440-family-protein	unknown	unknown	gnl\|CDD\|237472
NZ_CP048209.1\|WP_162360071.1\|6524324_6524792_-\|ribose-5-phosphate-isomerase-B	unknown	unknown	gnl\|CDD\|235509
NZ_CP048209.1\|WP_162360060.1\|6513498_6515013_-\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|236448
NZ_CP048209.1\|WP_162360074.1\|6526350_6527451_-\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|223088
NZ_CP048209.1\|WP_162360063.1\|6516160_6516385_-\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|349425
NZ_CP048209.1\|WP_162360066.1\|6519249_6519879_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162360065.1\|6518082_6519231_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|223458	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP048209.1\|WP_162360069.1\|6522283_6523531_-\|serine-hydroxymethyltransferase	gnl\|CDD\|234571	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed.	0
NZ_CP048209.1\|WP_162360067.1\|6520060_6521119_-\|hypothetical-protein	gnl\|CDD\|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	1.80898e-09
NZ_CP048209.1\|WP_162360077.1\|6530856_6536181_-\|hypothetical-protein	gnl\|CDD\|164795	PHA00370, III, attachment protein.	0.000133018
NZ_CP048209.1\|WP_162360068.1\|6521288_6522080_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	4.66554e-22
NZ_CP048209.1\|WP_162360730.1\|6537107_6538199_-\|peptide-chain-release-factor-N(5)-glutamine-methyltransferase	gnl\|CDD\|236467	PRK09328, PRK09328, N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; Provisional.	6.43191e-64
NZ_CP048209.1\|WP_162360078.1\|6538727_6539801_-\|peptide-chain-release-factor-1	gnl\|CDD\|234801	PRK00591, prfA, peptide chain release factor 1; Validated.	0
NZ_CP048209.1\|WP_162360076.1\|6529263_6530049_-\|stage-II-sporulation-protein-R	gnl\|CDD\|378205	pfam09551, Spore_II_R, Stage II sporulation protein R (spore_II_R). SpoIIR is designated stage II sporulation protein R. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species. SpoIIR is a signalling protein that links the activation of sigma E to the transcriptional activity of sigma F during sporulation.	2.59473e-68
NZ_CP048209.1\|WP_162360072.1\|6525066_6525648_-\|low-molecular-weight-protein-arginine-phosphatase	gnl\|CDD\|319972	cd16344, LMWPAP, low molecular weight protein arginine phosphatase. Low molecular weight protein arginine phosphatases are part of the low molecular weight phosphatase (LMWP) family. They share a highly conserved active site motif (V/I)CXGNTCRS. It has been shown that the conserved threonine, which in many LMWPTPs is an isoleucine, confers specificity to phosphoarginine over phosphotyrosine.	2.11588e-63
NZ_CP048209.1\|WP_162360061.1\|6515029_6515578_-\|F0F1-ATP-synthase-subunit-delta	gnl\|CDD\|365949	pfam00213, OSCP, ATP synthase delta (OSCP) subunit. The ATP D subunit from E. coli is the same as the OSCP subunit which is this family. The ATP D subunit from metazoa are found in family pfam00401.	2.31228e-47
NZ_CP048209.1\|WP_162360073.1\|6525678_6526239_-\|manganese-efflux-pump	gnl\|CDD\|308338	pfam02659, Mntp, Putative manganese efflux pump. MntP is a family of bacterial proteins with a signal peptide and four transmembrane domains. It is a putative manganese efflux pump, since deletion of the gene leads to profound manganese sensitivity and elevated intracellular manganese levels in bacteria. Manganese is a highly important trace nutrient for organisms from bacteria to humans, and acts as an important element in the defense against oxidative stress and as an enzyme cofactor.	3.074e-31
NZ_CP048209.1\|WP_162360062.1\|6515574_6516057_-\|F0F1-ATP-synthase-subunit-B	gnl\|CDD\|180240	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated.	2.51667e-38
NZ_CP048209.1\|WP_162360075.1\|6527730_6529197_+\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.84043e-89
NZ_CP048209.1\|WP_162360070.1\|6523709_6524321_-\|TIGR01440-family-protein	gnl\|CDD\|237472	PRK13690, PRK13690, hypothetical protein; Provisional.	3.40977e-106
NZ_CP048209.1\|WP_162360071.1\|6524324_6524792_-\|ribose-5-phosphate-isomerase-B	gnl\|CDD\|235509	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional.	5.58095e-80
NZ_CP048209.1\|WP_162360074.1\|6526350_6527451_-\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|223088	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis].	5.4529e-81
NZ_CP048209.1\|WP_162360060.1\|6513498_6515013_-\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|236448	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated.	0
NZ_CP048209.1\|WP_162360063.1\|6516160_6516385_-\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|349425	cd18185, ATP-synt_Fo_c_ATPE, F-type proton-translocating ATPase subunit c (ATPE) and similar proteins. This family includes subunit c of F-ATP synthase (also called ATP synthase F(o) sector subunit c, F-type ATPase subunit c, or F-ATPase subunit c) and similar proteins. It is a proton-translocating subunit of the ATP synthase encoded by gene atpE.	1.43357e-19
NZ_CP048209.1\|WP_162360066.1\|6519249_6519879_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	3.09764e-133

>NZ_CP048209.1|WP_162360069.1|6522283_6523531_-|serine-hydroxymethyltransferase
MENLRKQDPEILKAMGLELQRQRDNIELIASENIVSEAVLEAMGSVLTNKYAEGYPGKRYYGGCEHVDIAEDIARNRAKELFGAEHANVQPHSGAQANMAVYLAALNPGDTVLGMNLAHGGHLTHGSPVNASGLLYNFVPYGVSEDTFTIDYAEVRKLAFKHRPRMIVAGASAYPRIIDFEELGRIANDVGALLFVDMAHIAGLVAAGLHPSPVPHAHFVTTTTHKTLRGPRGGMILCRKAWAQAIDKAVFPGSQGGPLMHIIAAKAVAFGEALQPSFKEYGKNVVANAQALAEALIAQGINIVSGGTDNHLMLIDLRNLNITGKDAEHVLDSVQITVNKNAIPFDPTSPFVTSGIRIGTPAATSRGMDVEAMKTIAEVIAMTLKNPKDEAVLAKARGMVSDLVSQYPLYPGIAY
>NZ_CP048209.1|WP_162360068.1|6521288_6522080_-|sugar-phosphate-isomerase/epimerase
MKLGIIAEPKAESFDYAAGLGLEFLEFCINVGVPAGDFAAVVPELKAASARTGVAVGSIGRWGPDRIAKDGSIIEEELQASYTLIDACQELGCPVFVCGANYIEERSYFENVQSAIAYFEKLLAYGQERGVRIATYNCHWNSFIVDGSAWKLIHGHLPELGIKFDPSHARYNGQNYLKEMTDWGHRFLHVHIKGSVIVDGKRFDDPPAGLDQTDWGTFMSILYGVGYAGGLSIEPHSNVWTGELGDKGVRFTVDYMNRLMLRG
>NZ_CP048209.1|WP_162360067.1|6520060_6521119_-|hypothetical-protein
MLLAIIIVIVSIVVVLNLASKQGQGVRGGRSGISRPSAPLRTPPACLGVPEGHPARPAAERLEAALTPDFEARVKDRVLRHAPSMREGEWQWRWFELKRYFLMCGVLRGVPMYSSQVDDVWHEMLMFTREYEQFCKQFCGQLIHHAPHEAGAKPDRGERAWFDWIYGELFLPASGSARLWGAFYRTPMPRERMRELETRGADELRAERFNAGAAAKFPDLAATIDYLIGRGRKLAAVRDTRSADGDSDWTSTAMMTGMLSTVFFASSWGPEESFRSEMEQHQSEEELRQGSGGGCGSSFACGGGAGADNNGSDNNGGDSGSCGGDGSSGGGSCSGGSDGGSSCGSSCGGGGD
>NZ_CP048209.1|WP_162360066.1|6519249_6519879_-|uracil-phosphoribosyltransferase
MGTLTICDHPLIQHKLTFIRDKETKTKDFRELVDEIATMMAYEITRDLPLETINITTPVVETPSKVVSGRMLGVIPILRAGLGMVEGMLKLIPAAKVGHIGLFRNPETLQPVEYYVNLPADATERLLIVVDPMLATGGSANAAIASLKSRGCTQIKLMCLIAAPEGVKAVQEAHPDVDIYLASLDSHLNDHGYIVPGLGDAGDRMFGTK
>NZ_CP048209.1|WP_162360065.1|6518082_6519231_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MAKLKVMTVFGTRPEAVKMAPLVLELQKHPEEVESIVCVTAQHRQMLDQVLEFFKIAPDYDLNVMKDRQTLTETTVRVLEGLEPVLRESKPDIVLVHGDTLTCFLASYAAFLQQIPVGHVEAGLRTWNKLSPYPEEMNRQLVGVLADVHFAPTDWSANNLRKENKPEAAIYVTGNTATDVFQYTVDKSFTHPVLEWAAGKRLIFMTAHRRESLGEPHRNIFRAVKRIADEFEDVAFVYAVHMNPAVREPANEILGGHPRIKLIEPLDVFETHNFFPHAYMIMTDSGGIQEEAPSFGVPTLVLRDTTERPEGIEAGTLELVGTDEDVVYDRARALLTDERLYARMSNAANPYGDGQVSIRIVEAILHHFGRRGERPEPFTQRS
>NZ_CP048209.1|WP_162360064.1|6517641_6517893_-|hypothetical-protein
MNRSDNDKNRSTENGNFGDNPWRAMGLIGSVGGTIGACLGLGYWIGAKFDTGYGGIVGMAAGFVAAVIMTVFLIRTFTGGNAR
>NZ_CP048209.1|WP_162360063.1|6516160_6516385_-|F0F1-ATP-synthase-subunit-C
MGATALIAAAIVFGLGALGAGIGNGLIVGRTVEGISRQPELRGTLQTTMFIGVALVEALPIISLVLAFIFFAKA
>NZ_CP048209.1|WP_162360062.1|6515574_6516057_-|F0F1-ATP-synthase-subunit-B
MHIEWSNFFIQLIAFGILYWLLSRYAFGPLFSIMEQRKQFVKEQLDNAENSRKQAEQQFEEQKQTLQQARKDAYDILEQAKQTSSKQADEIVQTAKSEASRLKDEAVKDIESEKNKAIAALRGQVSGMSVMIASKIIEKQIDDKSQEQLVNQYLNEVGSK
>NZ_CP048209.1|WP_162360061.1|6515029_6515578_-|F0F1-ATP-synthase-subunit-delta
MSRESVVAKRYAKALFELAQSNNAVADVEKQLKIVVDALSGDAQIRKFLALPNVEVSKKIDIIKGALSDKVSVMVLNTVELLIVRGRQGEIGSVYEAYTKVAGDALGQAHATIYTAKSLTAEEMSKVAAQFGEMIGKRIIAKQIVEPALLGGVQVRIGDRLYDGSLSGKLARLEQALKTQAL
>NZ_CP048209.1|WP_162360060.1|6513498_6515013_-|F0F1-ATP-synthase-subunit-alpha
MSIRPDEISTLIKQQIEQFKSEIQVVDVGTVIQVGDGIARVHGLENAMAGELLEFSNGVMGMALNLEESNVGVVIMGPYKSIREGDQVKRTGRIMEVPVGEALLGRVVNALGQPVDGNGPVATTATRPIESPAPGVMARKSVFEPMQTGIKAIDAMIPIGRGQRELIIGDRQTGKTQIAIDTIVNQKGNGVICIYVAIGQKQSTVRTVVESLRQQGALDYTIVVTASASEPSPLLYIAPYTGCSMGEYFMYNGKHVLVIYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQAGDISAYIPTNVISITDGQIFLESDLFYSGQRPAVNVGNSVSRVGSSAQIKAMKKVAGTLKTDLAQYRELAAFAAFGSDLDKVTQSRLNRGERTLEILKQGVNQPLAVERQVVSLYTVTRGHTDDIPVQDVRRFEQGLLAYVDANKPEIFASIRDTKDLTSDNEKVLVEAIKSFKNSFSVSV
>NZ_CP048209.1|WP_162360070.1|6523709_6524321_-|TIGR01440-family-protein
MAAVSDKETAWRSEQLTKDVETVVRELAQAAGLRQGQLLVVGVSTSEVLGERIGTSGTPETAEAIYAGIEAVRRDIGFHPVFQCCEHLNRALVIEREAAERYGLELVSAVPVRKAGGSMAAHAYRALPDACLVETVQAHAGIDIGDTFIGMHLKRVAVPVRPSIRSIGSAHLTMAFTRPKLIGGERAVYGLETQADAASGNCD
>NZ_CP048209.1|WP_162360071.1|6524324_6524792_-|ribose-5-phosphate-isomerase-B
MKIAIGADHGGYSLKEVVVPFIQSLGHEVEDVGCDCSQSVDYPDYALPVCELVAAGKADRGILICGTGIGMSIAANKVTGIRCALVHDMFSAQATRDHNDTNVLAMGERVIGPGIAQEIIRIWLETPFSNGERHVGRLDKVKRIEAKYAQPVHAE
>NZ_CP048209.1|WP_162360072.1|6525066_6525648_-|low-molecular-weight-protein-arginine-phosphatase
MKRILFVCTGNTCRSPMAEALLRAMAQERGMSLEVRSAGVSTVDGLPVSENAQSVLRRRNIEHNNGSAALDSGAITWADLILTMTAGHKSHLLQRFPSAVDKTHTLLEFANRDEEALRRIAELESLYTEFQMKQALGEQLTAEERGRLLELEAAIPSFDIADPFGGSLRIYEESAAEIEAALRNLLDRLQHRK
>NZ_CP048209.1|WP_162360073.1|6525678_6526239_-|manganese-efflux-pump
MVEAGMHAGQLLTLIIIALALGMDAFSLGVGIGLKGIRLLDILKLSALIALFHILMPLMGIFTGKYVGELLGSVAASAAGGLLLLLGGHMIYSSLRGDAVSSINHRSAWGMLIFALSVSIDSFSVGLSLGMFAVDMLLAVLLFGLAGGGMSIAGLLIGRKARSSFGEYGEAIGGVILFTFGLLIIF
>NZ_CP048209.1|WP_162360074.1|6526350_6527451_-|threonylcarbamoyl-AMP-synthase
MNLPVRNTSLWRVDGHAPDVEELTAAAELLRAGGTVAFPTETVYGLGADARRTEAVERIFEAKGRPSDNPLIVHIAERGQLEALTLPLAAEGAGTLAGRLMDRFWPGPLTIVLPVRPGAVSPRVTAGLDTVAVRMPAHPVALALIAASGCPLAAPSANRSGRPSPTLAVHVEGDLSGRIDGIVDGGAAGVGLESTVVEVVDGGTVRILRPGGVTAEALQGAGAAVLYDAVAAPEAASDAAAGQTPRSPGMKYAHYAPQGQMQLVKGEPEAVAAWIGAAVRAARDNGERTGVLAFAEHAARYDADCVLVVGSLARLDTAAHGLYASLREFDAQGVQRIWAETCPEQGIGHALMNRLAKAAGHAVVRV
>NZ_CP048209.1|WP_162360075.1|6527730_6529197_+|multidrug-efflux-MFS-transporter
MQDSASPRQVRILPIMIAIFFGSFVSALNVSTINIAIPVLTERFHTELSTTQWTLTGFMLAMGTFAPITGYFGERFSYKRLFLFAMAGFTVASICCALAWNVESLIAFRILQGAFTGMISPITMAIVYQVIPREKIAIAISLWAASAMLAPAIGPTYSGWLLDNVSWHWLFWLNVPITIVGIILISVYIPYYRLNVPKKFDLIGFLTVIVSSSTLLVALSHGNEWGWQSWQTLALFISGIVFLGLFIWRELTTDTPLLNLRVLKISRYSIALLISSIITISLYSGTFLTPVFLQNIQSVTPLDTGLILLPASLAMAFMMPVVGKLYTKIGPRALLCIGIVLMSLGTLPLSWLSIDISHRYIIFCMIIRNVGISFAMMPASNAGMEAVPKQFSGHASSLNNWVRNVLGSFAIAVFTSLLSSRAAHHAADFAKAGATDKTHITFMSFTMSVDDVYLIASIIAIAALPVALFLPKLKPQPSKRPEGEKAAA
>NZ_CP048209.1|WP_162360076.1|6529263_6530049_-|stage-II-sporulation-protein-R
MIRTYSRFPYRPVYGYVLLIAAILLMSWENQRADAAIAGGSIPAESIRLRILANSDSALDQLVKRQVRDAIVDEMNTWVAGPQTIEEARSTIVAHMGDIDAIIAAKLSERSFTYGYKAELGSVPFPTKIYGTEVYPAGNYEALRVTLGAGAGQNWWCVLFPPLCFVDAVSGEASTPATAAVTTAAAKADDAQKDGANDSVKQDAGAKTGSAKADAVQAKADNNGQAQQADAGSNDGTKQPEVKFFLWELLKSIFSFFKHLF
>NZ_CP048209.1|WP_162360077.1|6530856_6536181_-|hypothetical-protein
MKTIRFRHSVLLLLALLLTLGNAFTAAAASSYTVSSSATMPDGSKTINLNTVTEVDQNDYASMLGSGITFTLETADHQQVGAPIKRAIGDSYSPNGTVYEIPADALTFAGLQPGTAYTLKAAYDGADGVRTQEQTVSTPAAGYGFMVEHTPHGGAGAAPAADNTVRSDDDLVTVTVLDGSGSPIANKAVGVQVERYGGFIPATTDANGKIVLVGPNGVAPAVSEPVIMIAVDPNTPSYAVGTVYFQDRLDERFPNGQVIEMRYLDKNSHLITNSSSRQSYDGYGYTDRYFTQGVDVLISTNVMLSFQNIVKPEDGNEAYVFNAGAEELAPTAGYQRKTIVMDGGAYSRVKLDYSWEGQPVAAKNVNFVGLNGSLKTSREDAYGNAFLSDIESIYVPKGKAYGYLTVLNLPSSDQVAVNRELTATGSEHSLGGALSAADFAAVKFTTAYKTVSGQSAIRLAYMNGHMNYVDVSTALNAGSKLYIAKNQQVYKLNAALNENGDDAIVESFFTPTADSYAYASGASLQSTVKAYALPSNDGQKEERSRLVLGESVQFVLDTLDNLGELADVNGSVTADISKDGVPILKDQNMYWSLPEDKSKVHRIYGLDYQPAESGSYGVTFKLTRGENIVELGSAAFNVSAKHELDVEVRDQSGTLLDLVNKPYLTQEQAQKLTFTVREHVTGKTGAPVEGVSVSQYGNALPGKTNAAGTLTIENQVYGTLTFSAPGYLSKTVQLLVIDPEHQAVVRVSGLDKAEADAGLQTPGGVPMQNAYVYATVKDGAGNVSRQQYYLNGDQTVSYMAVPSPSVVSVDYIRRTQVHDGAAGSPFGYYMVGSLHTEPGKDYRLALDARQPLQQISTVQLAEQMDEVSIARTGLAGQQYLPYLIDDNNADQNRFYANKGTYDIVAKRPGGGVIYLQGVKIDSDTFALNVPNDPGSLAQIKVSGTSGITRIDYVNEQNTSLGVNTGYGYNGSNSLVYVTPGNMVVKVSSLIDNSDMEISYGVYIPKTELAAGARKDIAVATVAGLGVFGLGKDGKVTVTESQPFVKLGMVTGEGDPIDYLSQHRFYVFNNGSMDYGDSVRVTASNIAVKNGQGEEVADLSDLTGLPQWIYVGENGDYTIEGSVTVGGKTYAINQTVSVNIVADAANSGTDEPGTDIPGTDIGGGTGSNGNNNGNNSGNTGNTGNTGNTGNTGNTGNTGNTGNTGNTGNTGNTGNTGTGSTGISAGDANQGIQDLIRVAADSGKASKAAELIANTLPAIKAVQDSKAAEKSLQDISTTLASTAELLGSMTSEQDKGKVAAAISRMVSDTQYAFEQVADGPKALELAKSLIKDTGAVLEQLKNADPALVGALQDSLVELGKKALQKASTVTLDNSSVKVDNNTLVAALDAKSVTEQLETAKKALEDTMKDMAQVVGADKAAKLNTVITINIPKTGDDVTKLSADLPSEIVKAVQDSGLSGLKLTMNNVGFTIEPDTFGTVANGQTINLAAEVVENLTVTAPSSAEQLAKIPVMEFKASIDGQKVESFHKPIPVSFDVSAIDTSKYTPADLANLSVYLLNEHTLSWEPVGGVYDPITRTVQVNRGHFSTYTVMKSNLKFKDVPASYWAAEAINGLLGKGILDATASFDPSAKVTREQFTAWISRAYGLDGTGLKLSFADVAADNPYYAEIAAAYKQGLIQGRTAAKFDPKAEISRQEIAVLLSRALTAYNGKQLAGDSKQLLGSFKDNAAIAAWAKDSVALLKELKLAEGYEDNSYQPRRQTTKAEAAALVYRIYTMK
>NZ_CP048209.1|WP_162360730.1|6537107_6538199_-|peptide-chain-release-factor-N(5)-glutamine-methyltransferase
MTIADVCLKATAMLRERGIAEPRSNAELLLLHVLELERAELLRDWREPFPPQRYRRWRELLARKAAGEPVQYLIGEQWFYGMPFAVTPAVLIPRPETELLVEAVLEAADRLWPEAAGAADAVPAARLGGKLADAGPGGAGGEARNGGLDAAAEDGGAPGGYGSGVAGPQLDAAAKGGAAVPTVVDVGTGSGAIGVTLAALRPRWRVCASDLSPDALAVARANAARHGAAARMTFVQGDLLGPFAQPRPGIGVDAAGGVAGLRIDVLVSNPPYIPAGDIAGLQPEVRDHEPRLALDGGDDGLTPYRRMAEQLMQLSALPRIVGFELGIGQAEAVADLLRGIGAWREIRIIPDYAGIDRHVLAIE
>NZ_CP048209.1|WP_162360078.1|6538727_6539801_-|peptide-chain-release-factor-1
MLDRLQALADRYEKLSELLCDPDVAGDPKKLRDYSKEQSDLQPVYAAYTEYKQVVEQLDDAKAMQNEKLDEDMREMVKMEIDELDSRKTELEAEIQVLLLPKDPNDDKNVIVEIRGAAGGDEAALFASDLYRMYMKFADTQGWRVELMEANESDLGGFKEVIFMVTGKGAYSKLKYESGAHRVQRIPVTESGGRIHTSTSTVAVMPEVEEVEVEILDKDIRVDTYCSSGAGGQSVNTTKSAVRVLHVPTGIMAQCQDGKSQNENKAKALQVLRARISDMKRQEEEAKYAGERKSKVGTGDRSERIRTYNYPQSRVTDHRIGLTLHKLDSVLNGDMEEIINALTLTAQTELMERENLA

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Crispr_ID: NZ_CP048209_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_25

6572003-6572076

Orphan

Consensus_repeat	Method
TTTCTGCCTTTGGGCAGCTTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048209_25

>merge|NZ_CP048209|25|6572003-6572076|CRISPRCasFinder
TTTCTGCCTTTGGGCAGCTTTTTAGGCGGTCGAGGACAGTTGAGCGCCGAGTTCCTGCCTTTGGGCAGCTTTTT

>NZ_CP048209|25|22|6572003-6572076|CRISPRCasFinder
TTTCTGCCTTTGGGCAGCTTTTT	AGGCGGTCGAGGACAGTTGAGCGCCGAG
TTCCTGCCTTTGGGCAGCTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162360110.1\|6579044_6580430_-\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|133433
NZ_CP048209.1\|WP_162360105.1\|6572566_6573268_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|132881
NZ_CP048209.1\|WP_162360099.1\|6563965_6564805_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226354
NZ_CP048209.1\|WP_162360113.1\|6582166_6583297_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP048209.1\|WP_162360732.1\|6559100_6559427_+\|YnfA-family-protein	unknown	unknown	gnl\|CDD\|235016
NZ_CP048209.1\|WP_162360733.1\|6562319_6563936_-\|DUF3459-domain-containing-protein	unknown	unknown	gnl\|CDD\|200455
NZ_CP048209.1\|WP_162360114.1\|6583882_6584626_-\|molybdenum-cofactor-guanylyltransferase	unknown	unknown	gnl\|CDD\|133000
NZ_CP048209.1\|WP_162360112.1\|6581387_6582113_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|238693
NZ_CP048209.1\|WP_162360097.1\|6559602_6561348_+\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200477
NZ_CP048209.1\|WP_162360104.1\|6571010_6571835_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP048209.1\|WP_162360098.1\|6561423_6562176_-\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|238348
NZ_CP048209.1\|WP_162360111.1\|6580445_6581375_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP048209.1\|WP_162360106.1\|6573440_6575060_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270300
NZ_CP048209.1\|WP_162360100.1\|6564801_6566115_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP048209.1\|WP_162360102.1\|6568144_6569176_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP048209.1\|WP_162360109.1\|6576916_6579040_-\|beta-glucosidase	unknown	unknown	gnl\|CDD\|185053
NZ_CP048209.1\|WP_162360108.1\|6575978_6576890_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP048209.1\|WP_162360107.1\|6575091_6575964_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP048209.1\|WP_162360103.1\|6569369_6570869_-\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|366376
NZ_CP048209.1\|WP_162360101.1\|6566286_6567597_-\|maltose-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270304

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162360110.1\|6579044_6580430_-\|alpha-galactosidase	gnl\|CDD\|133433	cd05297, GH4_alpha_glucosidase_galactosidase, Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. Glucosidases cleave glycosidic bonds to release glucose from oligosaccharides. Alpha-glucosidases and alpha-galactosidases release alpha-D-glucose and alpha-D-galactose, respectively, via the hydrolysis of alpha-glycopyranoside bonds. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the alpha-glucosidases. Other organsisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. Alpha-glucosidases and alpha-galactosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	1.18524e-125
NZ_CP048209.1\|WP_162360105.1\|6572566_6573268_-\|DNA-alkylation-repair-protein	gnl\|CDD\|132881	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this family, AlkC and AlkD from Bacillus cereus, are distant homologues and are composed of six variant HEAT (Huntington/Elongation/ A subunit/Target of rapamycin) repeats. HEAT motifs are ~45-amino acid sequences that form antiparallel alpha-helices, which are packed by a conserved hyrophobic interface and are tandemly repeated to form superhelical alpha-structures. AlkD and AlkC are specific for removal of 3-methyladenine (3mA) and 7-methylguanine (7mG) from the DNA by base excision repair. Homologues of AlkC and AlkD were also identified in other organisms.	8.07726e-96
NZ_CP048209.1\|WP_162360099.1\|6563965_6564805_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226354	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].	8.80054e-108
NZ_CP048209.1\|WP_162360113.1\|6582166_6583297_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.43043e-34
NZ_CP048209.1\|WP_162360732.1\|6559100_6559427_+\|YnfA-family-protein	gnl\|CDD\|235016	PRK02237, PRK02237, YnfA family protein.	1.18604e-40
NZ_CP048209.1\|WP_162360733.1\|6562319_6563936_-\|DUF3459-domain-containing-protein	gnl\|CDD\|200455	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes Chloroflexi, Dictyoglomi, and Fusobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP048209.1\|WP_162360114.1\|6583882_6584626_-\|molybdenum-cofactor-guanylyltransferase	gnl\|CDD\|133000	cd02503, MobA, MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.	1.30955e-45
NZ_CP048209.1\|WP_162360112.1\|6581387_6582113_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|238693	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.	3.18404e-49
NZ_CP048209.1\|WP_162360097.1\|6559602_6561348_+\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP048209.1\|WP_162360104.1\|6571010_6571835_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.91106e-13
NZ_CP048209.1\|WP_162360098.1\|6561423_6562176_-\|GTP-cyclohydrolase-II	gnl\|CDD\|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	9.24754e-83
NZ_CP048209.1\|WP_162360111.1\|6580445_6581375_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.25307e-54
NZ_CP048209.1\|WP_162360106.1\|6573440_6575060_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	5.08319e-40
NZ_CP048209.1\|WP_162360100.1\|6564801_6566115_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.99877e-70
NZ_CP048209.1\|WP_162360102.1\|6568144_6569176_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.20405e-117
NZ_CP048209.1\|WP_162360109.1\|6576916_6579040_-\|beta-glucosidase	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP048209.1\|WP_162360108.1\|6575978_6576890_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.54712e-111
NZ_CP048209.1\|WP_162360107.1\|6575091_6575964_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.14958e-52
NZ_CP048209.1\|WP_162360103.1\|6569369_6570869_-\|beta-N-acetylhexosaminidase	gnl\|CDD\|366376	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain.	9.87303e-87
NZ_CP048209.1\|WP_162360101.1\|6566286_6567597_-\|maltose-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270304	cd13586, PBP2_Maltose_binding_like, The periplasmic-binding component of ABC transport systems specific for maltose and related polysaccharides; possess type 2 periplasmic binding fold. This subfamily represents the periplasmic binding component of ABC transport systems involved in uptake of polysaccharides including maltose, maltodextrin, and cyclodextrin. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.16396e-135

>NZ_CP048209.1|WP_162360104.1|6571010_6571835_-|alpha/beta-hydrolase
MNHPITIKSGGLELAGVLQYPALEAGEKRAAKYPLVIICHGFIGNRMGTDRLFVEAAERLTQSGYLVLRFDHGGCGESSGDYGSGGLDELIAQTRTVIDYASSLDLVDSERLILLGHSLGGAVAVLTAARDSRVKSLVLWAPVAHPYMDIRNIIGTKAIEEIDTVGRTDHKHYQFTKRFTDSLAQYQPLTETRGYGGDVLIVHGTADTVIPVDYCFLYQKMFWLRKEGNCDKEIILQGDHTFSSKESRDALLDISLRWIDAIGKRRNDWSLWTI
>NZ_CP048209.1|WP_162360103.1|6569369_6570869_-|beta-N-acetylhexosaminidase
MRKILLALLMLSVGLAGGCGSAGDREGTNAGNSSAQPPGQSGNAGNTPAVQPGNAGNAPTEPPGQSGNAGNPPAEQPGNAGNAPTEQPGQPGNAGNAPTEQPGQPGNAGNAPTEPPAQPGNAGNTPATPPATPTTAELVAQKLSKMTLDEKLGEMIIAGLDGTSASAQTKAMIQEQHIGGFIFYKNNITTPASVAAYVNQLKAWNKANSSPLLITVDQEGGRVSRLPGLLKIPAARVIGDTGDTKYAAAIDGAMGQASKLMGFNVDFAPVLDINSNPKNPVIGDRSYGTTAKKVTSMGLAAMEAIRKQGVIPVVKHFPGHGDTAVDSHLELPVVNKTLAQLKAFEWLPFQAAIKDGVDMVMVAHILFPKIDENVPASLSKTIITDELRGELGYRGVVISDDMTMGAIANHFGLAEAAVTSVKAGSDIILLAHGYEDATTVLNALKQSVQKGQLTEKRIDESVTRILTLKLHYKLSDAAVSAHPDVSGVNAAIKKAIAAH
>NZ_CP048209.1|WP_162360102.1|6568144_6569176_+|LacI-family-transcriptional-regulator
MSVTIKDVARIAGVSPSTVSRVVSNHPRISQETSRRVKAIMAELDYHPNIMAKSLVSKTTKTLGILLPRPAEELFANFFFGELIRGIVTQAARAGYDMLLTTVTSESTELETISRLVLGHRIDGILLLSSRTSDPIIGFLQEHQFPFVLIGRSDEYPNVLSIDNNNIQAAADATNHFIAQGHTRIGFISGPPNLVVSQDRLTGYRKALRDHRLEFRQEWVIEGDLLQESGFRAMSFFMSLPERPTALVVFDDLLAFGVLRGLTELGYSVPGDICLVSFNNIPLSELASTPISSIDIGTYQLGYTASQSLLRVVQDEPLSQKQIIIPHRLIVRESSISPSVNRG
>NZ_CP048209.1|WP_162360101.1|6566286_6567597_-|maltose-ABC-transporter-substrate-binding-protein
MKKTVSLLMVLTLAATMTACGAKENNAGNANNAGTTNNGAANNGTNAGGEEAELTPEPGATLLVWEAKEERPFVEKMMKEFTEKYGVNVKMEEIGAGDQVAKLTTDGPAGIAADVVLFPHDNLGKAVSAGLVLPNDEFEDEAKAENSEIAVNAVTYDGILYGYPRAVETYAMFYNKDLIANPPATFDEVKAFAKTFNDKKNNKYAFMWDIGNFYFSYPFLATTGGYVYGNNGQDKNDIGLNNDGAVQGATYFASLKKDVLPLKSGDVTYDIKKGLFTGGTLAMNIDGPWAIGDIKKSGINFGVAPIPSIDGKPSVSFSGVKAWYVNSFTKYPNAAKLFARFASTKEAQLDDFALTGAIPANKEATEDPKIQNDPTVKAFVEQFKNSQYMPSIPEMANVWTPIGAALSDIWNTGKDPKATLDNAVKQIQDANAAASK
>NZ_CP048209.1|WP_162360100.1|6564801_6566115_-|sugar-ABC-transporter-permease
MRSHQRTASILSVIIMGLGQLYNRQFVKGILLLCVEIMGGYYFVMRLPHAVWGLVTLGEVPTHLVKIGKRYKNVVGDHSVNLLIGGLVILILFALFVIVYVMNVRDAYRTGKQRDEGIAPSSFRASMSYVADRRFPQLLLTLPAISVLFLTIMPILMAVLLAFTNYSAPEHIPPAKLVDWVGFQTFIDLLSLKTWSHTFYGVFVWTVIWAVIATVTTYFGGLLVALLIDQKGIRFKGLWRSLFIIPYAIPQLISLLVMRNLFNGQFGPINQYLSYFGLGKVPWLTDPTWAKVTVILVNMWVGIPVSMVLILGVLTAIPKDMYEAAEVDGATAFQKLRVITLPFVFFATTPILITQFAGNINNFNVIFLLTNGDPVNGDYQYAGSTDLLVTWLYKLTLNNNKYNFASAIGIIIFVIVASLSIWSYRRSRSFKEEDMIQ
>NZ_CP048209.1|WP_162360099.1|6563965_6564805_-|sugar-ABC-transporter-permease
MSMKSRKALRLAVSYVILVILAVAAVYPAVWVLFSALRPGSSLFSKSFFPSHPTFTHFKELFTSPSFQFGRWYWNTLKIATMSMILSTLLTTLSMYALSRFRFKGRKTILTTMLVLGMFPGFMSMVAIYILLLQLDLLDTHTALVLVYSSGSVLGGFIVKGFYDTIPRSLDEAARIDGASHLTIFWRIMLPLSRPMLTYIGLTTFTAAWVDFIFARLVLRSKEKWTLAVGMWDMVANFQNSNFTLFAAGAVLIAIPIMILFAFLQKFLVQGLTAGASKG
>NZ_CP048209.1|WP_162360733.1|6562319_6563936_-|DUF3459-domain-containing-protein
MRGAGWAAAAALLLGTMGCFSAGRHVEEQIAAGSTGKKTASAVQVDEQPGTVYYEIFVRSFYDSNGDGIGDLNGVTAKLDYLKELGVGGIWLMPINPSPSYHGYDVTDYYGVNKDYGTLGDMQKLLGEAHKRGIKVIMDLVLNHTSSEHPWFKAALTDPNSKYRSWYHIEQKDAQVPSDGAVGGDPWHPHGSEKYLGVFWEGMPDLNLDEPAVRGELIRIGSFWLEQGVDGFRMDAAKHIYGDFASTIDTDAVKARNLKWWQDFRAGISGTKKNAYIIGEVWDSPAVIAPYLDKAFDSAFNFDAAKKLLAGAAQEQNPDIAFTLQRIYDMYDKSSGGAFLDAPFLSNHDQNRTMSELDGSVDHAKMAAALLLTLPGNPFIYYGEELGMKGMKPDESIRAPFPWYRTAGGGEGQTSWETDLYNPTPDKVSAEAEEADPNSLLARYKQLLAWRSQLPVLRDGTIADFEQGNPAVAAYYRVTKAERMLVVHNLSGQKQTVDLTQAFEAGRGAAAIVRATDDGASLKSGSLKLPPYGTALVQ
>NZ_CP048209.1|WP_162360098.1|6561423_6562176_-|GTP-cyclohydrolase-II
MPVIDENIVSMLDRNIETIKGKNGTIIVVGPIRLPVNLDGETVQFQWYCWLPCRDLVHKEGGCKEKERTEFLIEQLSASNLAEKQQSSVLVYGDFANADDALIRMHSICHTGDIFGSKRCDCGYQLHQSMQMIVKHGTGALFYLANHEGRGIGLFSKAMAYLLQEKGYDTVEANLELGFKDDARSYDDTLVVLKHLRSKPVTLITNNPRKLEALKASGMNVGGRVPLWGDISEFNRKYLQTKVNRSGHLR
>NZ_CP048209.1|WP_162360097.1|6559602_6561348_+|glycoside-hydrolase-family-13-protein
MLLEAIYHRPKQNWAYAYDRSTLHLRVRTKRGDMDAVQAIAGDKYAWDKTKQTLDMRIFASDALFDYWETEAEPPFRRLRYAFGFKQDKTELYMTESGFADRLPDDCLTFFDFPFINPADVFEPPAWVKDAVFYQIFPERFANGDPDLNPEHIEPWGAKPTPGNFFGGDLQGVIDHLDYLQTLGITAIYFTPVFEATTNHKYDTRDYMKVDPHFGSNELLRSLIERCHERGIKVLLDAVFNHAGATFAPFLDAKEKGADSEYAGWFHVRDWPLRVEDGIPTYDTFAFEPIMPKLNTEHPDVKKYLLNVARYWVEEIGIDGWRLDVANEVDHAFWREFRDTVKKVNPDAYILGEIWHDSMMWLQGDQFDAVMNYPFTNAVLDYAAYGKLDGRSFANAIGTQLANYPQQVSEAAFNLLDSHDTPRLLTLAGGDERRMKLAALFQFTYPGTPCIYYGDEVGMSGKGDPDCRQCMVWDERQQNGGLLRFYRALIALRKEHAALRGMDFAFLHAEADDAAIAYERRGGGERFIIAMNAGTASRELNIHGAGGDWQDAFTGHRAAAHKNSLAIELEAGGFAVYKQLK
>NZ_CP048209.1|WP_162360732.1|6559100_6559427_+|YnfA-family-protein
MAILLFLIAGLAEIGGGYLVWLWLKEARPLWFGLVGSLVLVAYGVIPTFQSFPSFGRVYAAYGGVFIVLAVLWGWLVDRKAPDVYDWVGAAVCIAGVAIMLWAPRGAA
>NZ_CP048209.1|WP_162360105.1|6572566_6573268_-|DNA-alkylation-repair-protein
MKETETAVDAAAYADKLEALLRRHANAGQAAAMKAYMRDQFEFLGIRTPERNALMRAFMKEHGVPSGAELEATVRRLWALPEREFPYAAMTLLEKRKKELGPAQIELLEFLVTTQAWWDTVDLLASHLAGALFSKHPELVPAYTEKWIAADSLWLRRSALLFQLGYKGRTDAELLFALIRRTAHESDFFMRKAIGWALREYGKTDPAAVRAFVRDTELSPLSVREALKHIGAE
>NZ_CP048209.1|WP_162360106.1|6573440_6575060_-|ABC-transporter-substrate-binding-protein
MKKTATVATLIVSALVFTACGSKGGGGNLADASFKVDEATPSWKTDKSTANLDWYINFDWFAQTWGSDTATKFITEDTGVNVTYQNGTDDKLNTMMASGDLPDIITIDGTSPLIKDASKFAIPLDELAKKYDPYFLSSAAKPETLKFFTQEDGHIYGYPNFSNTTSDYEKGGIYGNQAFMVRKDIYEQIGSPDMTTPEGFTAALQAVQKLNLKDELGKPVVPFGTENFGEGSEKNGVFDRTLQDFLGVPMLTEDGKYYDRLTDPDFQKWLKVIVQARQAGLTDKDMVTMTKDDKDAHLTNGSYFVFFANDIIGETDPMTLWDSEHPDKAYIAIDGPKSTMGRKTALPGTSIEGWTQTFISKSAKNPQKAMELVTYLVSEYGDTVMNFGREGETYTMKDGKPVLNPDLLQLKQTDPAGFEKKVGLTTHLWLQDSALLSRQMGIDQFPKYLQQAKQWTVPYTVPQFELASLDVYLSRESARNVEKINQEWAQTIAKILNAKSDADVDQAMAAFVKYRQDNGYDKLVEERNKQIESNQKKLD
>NZ_CP048209.1|WP_162360107.1|6575091_6575964_-|carbohydrate-ABC-transporter-permease
MPLARGERWFHIFNVIFMCVFIAVIVFPLINVVALSLNDGYDAMKGGIYLYPRKFTLVNYETILKDTTIYRALGVTVMKTLIGVAGHLIITGMAAYAMSKSNLIGRKLFIRLGIISMFFYGGLIPTFLVIKSLGMANNFLVYIIPVLYSFYDMIILMNFFRGLPESIEESAKIDGASVFQIFFKIVMPLSLPVFATIALFHGVYQWNDFFVAKLYVTDKSLYPIQYYLYQLLTSTGAANASKAGVYISKAFTTQSLQQATMIITTLPIMVVYPFLQKYFISGMLVGGVKE
>NZ_CP048209.1|WP_162360108.1|6575978_6576890_-|sugar-ABC-transporter-permease
MHLKFIDRLKAQWQLQAMVWPGILLMIVFSFIPMFGLIIAFQDYSPLDGFMNSEFVGLDNFKAFLGDSDFYNVLTNTLGISVLKLLIGFPLEIVLAIMINELRTGLFKKFTQTVSYLPHFLSWVILGGMFITWLSSAGLVNSLLMALHLTDSPIPFLTNANGYWWVATLSDIWKEVGWGTILYLAAMAGIDPSLYEAARVDGAKKLKQIRYITLPGISHIIVLMFVLRVGSVLGSNLEQALVLQNGSNIHRSEVIDLYVYHLGLTQGDFSFATAVGIFSSVVSVILLLGANFLTKRVNDSSIF
>NZ_CP048209.1|WP_162360109.1|6576916_6579040_-|beta-glucosidase
MNDNQLQQLLQAMTLEEKIGQLTQITGELYVGKVDAEMVETGPEYASHVLGDGTLYTIGSVIGASSAKFTNLIQSEYLKQSRLKIPLLFMHDAIHGYKTIFPIPLGLSCSWDENVLETAAAVTASELRASGIHVNFSPMVDLVRDARWGRVMESFGEDHLLSGNLGRAMIKGYQKIQEGRISAAGVAACLKHFAAYGAGIGGKDYYAVDMSLREFFDYYGKPYEIALQEQPKFVMSSFNSFNGTPVTASKRMMKDVLRDRYGFDELVISDWGAVAELQKHRVAHDGREAAELAMNAGIDIEMVSTLYLEHFETVLAQHPALLADIDAAVMKVLRLKNELGLFENPYASEEEEPSVILNADFLAAAEDAARKSCVLLKNDGDALPLRAAHKRILLVGPFAGTKELLGNWACKGSFDDVVSLADGLKQADPSLTVDVCETLADCPADVLERSDYIIASIGESWTLSGEGHSSVDIGLEASQQALVRAVKATGKPYACVCFAGRPLALQDIADDMPALLWCWYPGTRAGAAIASLLTGQATPSGKLTMSFPRHSAQNPIHYNEYSSGRPANASSYSSRYQDCELGPLFPFGHGLTYAGATYADFDISSDVITADKPVSVSFTIHNPSGYAYPEIAILYIEDVVSRSVRPVREMKAYQVISVPAHGSVRATLTVTLEDLHYLDAELRRTIEPGAFRLYINDPRQPVFTITH
>NZ_CP048209.1|WP_162360110.1|6579044_6580430_-|alpha-galactosidase
MKKMKIALIGAGSVSFALGALQDIVLSPRLKSQAELEIALMDIDADNVGRTYRYAKEMFDSFSHPAAIWQTTDLEQALTGADFAIVAIEVNRYFYWSQDFHVPRLYGSKQIYGENGGPGSMFHTLRNLGPMLEIARMMEKVCPDAWFINYTNPEAKLVEAISKLTSIRIVGLCHGLDMGVHQLCDFLEMKEEEIGFEGGGLNHFGFFTKIWDKKNGEDLYPRFREQEKKANRLAQFDHIALSRAMFQIYGYYPYPGTNHCGEYVSYAADFYAGLSLQYRYDPMREQLWQEGSRTPDFVYAANGGSLDKGLFENVQTQDSWVEQAYTFNKDKVCPSMEYAIPIIEAVFFDDEIHINAVNLPNNGAIKGLPDDMVVETQAVANGQGVFLKPMTVELPTAVIGTIHVQGMIHRLLLEAFQENSKNKLLQAILLDPQAPTYYQACKMIDEMCELQKDILPALEWK
>NZ_CP048209.1|WP_162360111.1|6580445_6581375_-|ROK-family-protein
MNESVIGVDIGGTNVRVGLVNDKLELVRKATALTDSFGSADELFAGIRDMIGTVDPGHAASKIGIAMPVPWKRGTTHIVDAVNIPYLENVPVAAIASQFPGCGVYFENDVNVIAALEAEQGASRDSDHSIYITVSTGIGSGIILHREVLHGAHGYAGEIGSMIISDKDNNHASLYCGTLESLCSGKALEEESKRLFGEDATTMTLFERYHRQDERAVAVIGLWVEYFSRAIASLMQTLDPDVFVLGGSVIDNNLWLIDNVLENTRSKVMDHLKAGIRIVSPAFGGDAGVIGAGYSAWKQANQIARRQTV
>NZ_CP048209.1|WP_162360112.1|6581387_6582113_-|glucosamine-6-phosphate-deaminase
MIRIFETEAELARAIADEMLRNLTHEADPVFCLASGSTPQKSYREFADAVDPAGPIKSLRIVSLDEWVGIGRGSEGSCFQMMNADLFSLLPLDESRIVFYDGTKADLKAECERIDRFIERHPITFSLMGVGMNGHIGLNEPGCPVLNNSSVVELAETTRVVGQKYFKAGAKLEQGITLGLGQISASKRVVVAITGEHKAAIVREIFGNPQAKLPAQELLGFEHIDFFLDGAAAKYLDGNKN
>NZ_CP048209.1|WP_162360113.1|6582166_6583297_-|ROK-family-protein
MKSFLPNDIKDENRKIIFDILLQHPELAKVEITEKTAMSFVTVSKIVNYFEQIGLLTATGESREGAGGLGRKRTVYRFNGNSYVTIGIQTIGKRMKALLVNLYGRIVDSYAIDTPIAFHGEQFAAVFDEIVERMRKKAEEIGGTIVGIGIGVDGAINRRKKTIRMHTADRREEDYPYEPIIDNLTQRARLPVLIENDVNASILAEFRNLENAEEPVNDLIHISVGDGVGAGIILNKELHRGFNASAGELEYMCFDPDYRKTPSSVGWLESKLGIETLHGSYDLASAEGRDACAEYVARHLALVITNMISILDINRVVISGKTVALFPDRLLTRTAEYVTQYTDWDPKISVSDSSDSAAIGAAILILQQEMIHVLAD
>NZ_CP048209.1|WP_162360114.1|6583882_6584626_-|molybdenum-cofactor-guanylyltransferase
MRAEEVTGVVLAGGQSTRMGRDKALLPIAGKPLVRHLAERMAALGIRRLIVACGTEARGREYGALLQGLAGADEIVTAADAYPGSGPLAGLHAALGAVPERGYAFVMACDMPTVSVGLFARLLQAAEGGGAQSGAEAEGFGLADASLRPSIGAGGPMDGEAAGQAASAAEQGAIPQVVLTPGQPFHALYHASAVHVLARRLEQGDLRLMSLLGELRTTVIALSEAEEAAFVNLNTPELYERFERRGE

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Crispr_ID: NZ_CP048209_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048209_26

6645633-6645706

Orphan

Consensus_repeat	Method
GGCAATAACGGATCCTCTGTCCG	CRISPRCasFinder

1 spacers

WYL,DinG

The CRISPR arrays of NZ_CP048209_26

>merge|NZ_CP048209|26|6645633-6645706|CRISPRCasFinder
GGCAATAACGGATCCTCTGTCCGTCTCTCCCCCAATATGCCCCGATTTCGAGTCAATAACGGATCCTCTGTCCG

>NZ_CP048209|26|23|6645633-6645706|CRISPRCasFinder
GGCAATAACGGATCCTCTGTCCG	TCTCTCCCCCAATATGCCCCGATTTCGA
GTCAATAACGGATCCTCTGTCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048209.1\|WP_162360159.1\|6648007_6648520_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|223695
NZ_CP048209.1\|WP_162360161.1\|6653563_6653941_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360163.1\|6654706_6655120_+\|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl\|CDD\|225412
NZ_CP048209.1\|WP_162360162.1\|6654275_6654692_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048209.1\|WP_162360153.1\|6639070_6640042_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP048209.1\|WP_162360157.1\|6643600_6645223_+\|arylsulfatase	unknown	unknown	gnl\|CDD\|293749
NZ_CP048209.1\|WP_162360156.1\|6642306_6643209_-\|TauD/TfdA-family-dioxygenase	unknown	unknown	gnl\|CDD\|225086
NZ_CP048209.1\|WP_162360742.1\|6652864_6653314_-\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377457
NZ_CP048209.1\|WP_162360740.1\|6637831_6638800_+\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP048209.1\|WP_162360150.1\|6633094_6633928_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|277331
NZ_CP048209.1\|WP_162360160.1\|6651604_6652690_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP048209.1\|WP_162360158.1\|6646002_6648024_-\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl\|CDD\|223556
NZ_CP048209.1\|WP_090575021.1\|6655205_6655406_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048209.1\|WP_162360743.1\|6655709_6656723_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	unknown	unknown	gnl\|CDD\|181084
NZ_CP048209.1\|WP_162360741.1\|6648757_6650197_-\|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP048209.1\|WP_162360154.1\|6640194_6641070_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236229
NZ_CP048209.1\|WP_162360152.1\|6636468_6637599_-\|nitric-oxide-synthase-oxygenase	unknown	unknown	gnl\|CDD\|376957
NZ_CP048209.1\|WP_162360151.1\|6636132_6636387_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048209.1\|WP_162360155.1\|6641348_6642194_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP048209.1\|WP_162360739.1\|6633980_6635819_-\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|223587

Protein	Function_ID	Function_description	E-value
NZ_CP048209.1\|WP_162360159.1\|6648007_6648520_-\|metallophosphoesterase-family-protein	gnl\|CDD\|223695	COG0622, COG0622, Predicted phosphoesterase [General function prediction only].	7.65149e-34
NZ_CP048209.1\|WP_162360163.1\|6654706_6655120_+\|ImmA/IrrE-family-metallo-endopeptidase	gnl\|CDD\|225412	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism].	9.22953e-15
NZ_CP048209.1\|WP_162360162.1\|6654275_6654692_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.01449e-16
NZ_CP048209.1\|WP_162360153.1\|6639070_6640042_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	8.11275e-44
NZ_CP048209.1\|WP_162360157.1\|6643600_6645223_+\|arylsulfatase	gnl\|CDD\|293749	cd16025, PAS_like, Bacterial Arylsulfatase of Pseudomonas aeruginosa and related proteins. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	0
NZ_CP048209.1\|WP_162360156.1\|6642306_6643209_-\|TauD/TfdA-family-dioxygenase	gnl\|CDD\|225086	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism].	1.60627e-90
NZ_CP048209.1\|WP_162360742.1\|6652864_6653314_-\|phage-holin-family-protein	gnl\|CDD\|377457	pfam05105, Phage_holin_4_1, Bacteriophage holin family. Phage holins and lytic enzymes are both necessary for bacterial lysis and virus dissemination. This family also includes TcdE/UtxA involved in toxin secretion in Clostridium difficile. The 1.E.10 family is represented by Bacillus subtilis phi29 holin; 1.E.16 represents the Cph1 holin; and the 1.E.19 family is represented by the Clostridium difficile TcdE holin. Toxigenic strains of C. difficile produce two large toxins (TcdA and TcdB) encoded within a pathogenicity locus. tcdE, encoded between tcdA and tcdB, encodes a 166 aa protein which causes death to E. coli when expressed, and the structure of TcdE resembles holins. TcdE acts on the bacterial membrane. Since TcdA and TcdB lack signal peptides, they may be released via TcdE either prior to or subsequent to cell lysis.	4.17387e-08
NZ_CP048209.1\|WP_162360740.1\|6637831_6638800_+\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	2.5944e-154
NZ_CP048209.1\|WP_162360150.1\|6633094_6633928_+\|hypothetical-protein	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	7.67631e-38
NZ_CP048209.1\|WP_162360160.1\|6651604_6652690_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	5.80395e-51
NZ_CP048209.1\|WP_162360158.1\|6646002_6648024_-\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl\|CDD\|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	1.72368e-177
NZ_CP048209.1\|WP_090575021.1\|6655205_6655406_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.8684e-31
NZ_CP048209.1\|WP_162360743.1\|6655709_6656723_-\|thiazole-biosynthesis-adenylyltransferase-ThiF	gnl\|CDD\|181084	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated.	0
NZ_CP048209.1\|WP_162360741.1\|6648757_6650197_-\|ATP-dependent-DNA-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	8.10483e-56
NZ_CP048209.1\|WP_162360154.1\|6640194_6641070_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|236229	PRK08303, PRK08303, short chain dehydrogenase; Provisional.	2.26836e-162
NZ_CP048209.1\|WP_162360152.1\|6636468_6637599_-\|nitric-oxide-synthase-oxygenase	gnl\|CDD\|376957	pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain.	0
NZ_CP048209.1\|WP_162360155.1\|6641348_6642194_+\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.54509e-05
NZ_CP048209.1\|WP_162360739.1\|6633980_6635819_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.63521e-150

>NZ_CP048209.1|WP_162360157.1|6643600_6645223_+|arylsulfatase
MSSQPNVLLILNDDMGYSDIGCYGGEVDTPNLNRLAAHGLRFSQFYNTARCSPTRASLLTGLHPHQTGVGILVDDDGPEGYAGNLNERCVTIAEALKDHGYRTYMSGKWHVATDIFNPNDTWPRQRGFDRYYGIITGAADYFQPVTLTRDNDNAEHEALAEDFYLTDAISDDAARNIREHAAAGPDRPFFQYVAYTAPHWPLHAPEEDIAKYKGRFDEGWDVLREQRLQRLVELGLVDASWALSERDPSQPAWENAEDKEWRLRRMEVYAAQIDRMDQGIGRIVRALEETGQLDNTLILFLADNGGCAEELDEPFTAFLKKRRSLLEKAKDGSPIAYGNGPGVLPGSQRTYQSYGVAWANLSNAPFRLYKHWVHEGGISTPLIAHWPAGIHEQGGIRHSPGQLTDIMATVLEATGAPYPQTYRGRDILPLEGESLVPLFASDDRDRRPLFWEHEGNGAVRVGRWKLVRNYPDAWELYDIEADRTEQRDLAAALPEKAKELRELYEQWAARAGVIPREKILDLYAKARGEEASGATHFIRK
>NZ_CP048209.1|WP_162360156.1|6642306_6643209_-|TauD/TfdA-family-dioxygenase
MAVTVTGTKEWKVERIAGRLGAQVSGARLSGELDDASFEAIYELLLAHKVLFFRGQQHLTNEEQEQFAKRFGNPVAHPTVPAIAGTDYTLELDSDKGDRANSWHTDVTFQAAYPKISILRGVSIPESGGDTVWADTHAAYHTLPVELKQFAERLWAIHSNDYDYVNQRYVWSENGRKHFEEVFTSKVYETEHPLVHVHPETGEKHLLLGHFFKRFIGYNTADSEDLYRLFQRHITQLENTVRWRWQAGDVVIWDNRATQHYAVNDYGSAKRVVRRVTIDGEIPVSLSERRSVTREVGKKK
>NZ_CP048209.1|WP_162360155.1|6641348_6642194_+|hypothetical-protein
MEHTFTIEPGAFSAFADEDALIEQCKQWGLLSDKAVKSKAFVYKRGGSAMPCAIVGFVDFMTAVIEFGNKQRHLIHPALLKEMQASNYGQRQRPADAPETAEAEADAQQDEPASAAAGAGGSGTEADVQAKAPAAKDSAPAAAAVGHQEEAPDRAQAATADEPSAEKAPPEAAKEKPAKKKSAKPQLPEEKVKMTATVKEFATVPNHFAEEDDEVVIYGNVAITEPELELGDAWSSHSNTLKKLELEVGDTITFEAKVVAKKLTKHPVPYKINNPSKLAKV
>NZ_CP048209.1|WP_162360154.1|6640194_6641070_+|SDR-family-NAD(P)-dependent-oxidoreductase
MKPLTGQIAVVAGATRGAGRAIAAMLGAAGATVYATGRSVRGNPSDIGRPETIEETAELVTESGGRGIAVRVDHTVPEEVQALFARVAEEQDGRLDILVNDVWGGESLTEWGKPFWEGSLDKALLMQRRAVHSHMITSYYGAPLMIRRGSGLIVEITDGIDYKYRGNLPYSLAKTSVIHLAESQAAELRPHGVAAVAVTPGFLRSEEMLAHFGVTEANWRDAGAQDPHFLQSETPFFVGRGIAALAADPDLMSKSGRIFSSWGLSDDYGIEDVDGRRPHWGRYAEEQGFYK
>NZ_CP048209.1|WP_162360153.1|6639070_6640042_-|YafY-family-transcriptional-regulator
MRADRLMAVLALLQAHGKLSAKEMAEKLEVSERTVHRDTQALSVAGIPVYADRGSGGGWSLPEGYRSRLTGLTTAEISSLLFPRDVVRDLGLEGGARTAASKLLASLPPRTRRDAELVRERLHIDGAGWRDAGPRDAGASLAVVQEAVWAARKLRMTYRPPGGEEAKDKLIRPLGLVFKTGTWYVMALADTEDELRTYRISRMEEARLTAESFERPAAFDLASAWEQSLASFRDRLPRYEAKVLVAADVWSRFVRERFVTVGGHADGGEGWIEAEAEFHTPDAACGVILAYGRHVKALAPQELRERIAGEARAMSAMYAGDEE
>NZ_CP048209.1|WP_162360740.1|6637831_6638800_+|NADH:flavin-oxidoreductase/NADH-oxidase
MAPMCQYAVEAKDGIPNEWHYVHYVTRAIGGAGLIIMEMTDVEPNGRITDYCLGLWSDDHIPAYRRIISEVRKHGAKIGIQIAHAGRKAEHAAEPVGPSDIAFSDAYRKPRALSTEEVRGMVVKYREAARRAVEAGVDTIELHGAHGYLIHQFHSPIINNRTDEYGQDRALFGAQVIQAVKSVMPADMPLIIRVSAAEYADGGYDLAYGIDIFRRYRDAGVDLFHVSSGGEAPIGSRKPDFYPGYQVPLARELKQALGVPVIAVGMLDDAKLADATIAHGDADMVAVARGMLRDPYWALHAIQAVGGKTAGELIPRQYERAY
>NZ_CP048209.1|WP_162360152.1|6636468_6637599_-|nitric-oxide-synthase-oxygenase
MQNQSTAIGRPALLEEAGTFIEQFGSELGVPREETDARLKRIADELEATGTYTHTDAELAYGAKLAWRNSNRCVGRLFWESLTVQDARAARTEEEIADAIFRHIEYATNGGKLLPAITIFAPSADAERPRVRIWNEQLIRYAGYRQADGSIVGDPVSEELTRMCEALGWRGEGTAFDVLPIVVQIGGREPRWFDVPRGLVLEVPLAHPDLPAFARLGLKWYAVPFVSGMRLEIGGLHYTAAPFNGWYMGTEIGARNLADASRYDMLPKLAALMGLDTARESTLWRDRALVELNVAVLHSFKTQGVTIVDHHTATRQFALFAEKERQNGRTPTGRWSWLIPPLSPATTGVFHTRYDDTEKKPNYFYQQTPWGDNSRQ
>NZ_CP048209.1|WP_162360151.1|6636132_6636387_-|hypothetical-protein
MKSDLNRYVLDDTDRKDNKTASLLVAVSWIIAIGGILRALYMLSSADSRGFWMTLFVSLAAGAFIRGMAEIIRLLQALVQKPAG
>NZ_CP048209.1|WP_162360739.1|6633980_6635819_-|DEAD/DEAH-box-helicase
MRSPHLWYDRECRLWRRNRLYRVHRQNEVDILAGFEQLGIAKERALSLRNEGITEATPIQESAIPVIMQGSDVICQAQTGTGKTLAFLLPMLEKTRADREDVQGLILTPTRELALQITTELKKRLEGKEEFSVLAVYGGQDVESQLRKLKRGVQLVVATPGRLLDHIRRGAIKLGAVKMLVLDEADQMLHMGFLTEVEEILTQMPYRKQTMLFSATMPAGVRSLAQRFMIEPKDITVRAPQVTVKAIRQLTVEVGAQNKQEQMKRLLEEHNPYLGVIFCRTKKRASALNDYLQENGFNSAELHGDLSQAKREQVMKRFRDAKLHLLVATDVAARGLDVEGVTHVFNYDIPENAEGYIHRIGRTGRAGEAGLAITLVSPHDRLELAAIEKGIQMSIPREGRAGAAPAREPRERGGDKRERGEKPTGGRSGGERRGAGRHGAGAGRGAQGGRGGRSAAGGGKAAGGGAYAAAAKRGSGTDEPPQWGAAARRAEAPARGRSRYSSPAGEAAGERGTAARGRGAGASRGEAGARGGAGRAGAPQFPGSGSGRGGAGREAEYGSRGGGESRGRGPSSPRGGAGRAAGGRSASGGGAKGGRPGGKQGPGGRPQRTRSR
>NZ_CP048209.1|WP_162360150.1|6633094_6633928_+|hypothetical-protein
MIIIAALAGLASLGALHTLWVRYSYYRIGSKNAGGLTVVQLSDLHGRIRFINGSLVRKVNRLNPDLVMITGDLASRKGQLPKIMKEIQKIQCPRIFFVPGNYEREGMDGFRKKSYAQAEYDSILSQLRHRHVAVLDNRGVTVEHAGKRVLVYGFDNSVYGNERMTRSAEDVQRHDAVILLAHSPSIIHYISRHRIPFDLLLTGHTHGGQIRVMNRTIGAYRHFHTGLKIMNGSERFFIHRGLGTVKIPLRIGCSPEIAVFSLGGCFGQPAETGAIRK
>NZ_CP048209.1|WP_162360158.1|6646002_6648024_-|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MTTKAEDTIKAGTTIKLRNVGIFAHVDAGKTTTTEQMLYQSGHIRALGSVDAGTAQTDWMDVERERGISVRAAVTRFAWQDTPINLVDTPGHVDFLSEVERSLRVMDGAVLIVSAVEGVQAQTEIIWQALRELGIPTIIYVNKMDRIGADAKRVLAELHRLLSPGAVPIAAPIGAEADFAGSVNLLDASEMAGHPWAEPERQRLLEAAAEQDEALLEAYLDGQPLDERAAAAALVAGAHRGALFPVLFGSSNRGIGVKELMNAILAYLPAPSGSEEAPAAGVVFKMERDPVMGKIAYVRLYQGRIRNRDTVHNHTRDTQDKVTQIRRVHGQKSEDIGVLAAGDIAAVYGLSRARIGDVLGSPEGVPGEKRLAVPLLTVQVQWGSEADYPAVVAAFQELADEDPQLDLQWLQDERELHLKVMGPIQMEVLTSILLTRFKLAVSFGAPSVIYKETPAAAGEGFVAYLAPKPCWAILRFVIEPGERGSGLVYKSNVRNERLLDSYQNEVARRVPEALQQGLRNWEVTDLSVTLVEGEHHVWHTHPLDFVIATPMGIMNGLANVGTKLLEPMLRFRLSVPEEYGGKLMNELVVMRGEFEAPVLRQERMEIEGLLPVATTLDFPARLGAMTKGRGALTTFFAGYRECPPNVDVSRVRRGVNPLDEAKYILAMRNALSG
>NZ_CP048209.1|WP_162360159.1|6648007_6648520_-|metallophosphoesterase-family-protein
MKVVVVSDTHMTRMAKKLPDRLIRELANADAILHAGDWMTMAVWDMLRAYAETDGVAGNNDGSDIASKFGHRKIVTFGGVRIGIVHGHTGMGKRADTETNAFKSFSAGSVDVIVFGHSHVPVKRERDGVLMFNPGSAADKRRQPKYSFGIFTITGGRLVQAEHIYYDDKS
>NZ_CP048209.1|WP_162360741.1|6648757_6650197_-|ATP-dependent-DNA-helicase
MPEELAALAEAFVVQAERALLDGGAGGGRSPAVPGVQAGAEAGYASEEGLFALAGSDESGGQSATSGRGSGGLALASAATDGSGSGGLASASAATNDRDPGKLASAYAATSDHGSGSPASASAAARDRASSSLAAVEAGQSDRDSGSLSPASAAPGGHVIGDLVPADAASGGRGGTAPGTPELLELYFACQNFVRAAKLYDERYVTYTECERSEVRVKLFCLDPSHLLRTMGKGYRSTVFFSATLTPLSYYMDMLGSDGEADYSVVIPSPFSREQLEVYVSPMSTRYQDRERTKEPIVSLLSRVTAQHRGNYLLFFPSYAYMEDACERFAAQRQERTDADDMRIIVQSARMSEEERERFLAAFQSGAGERVIGFAVMGGIFAEGIDLVGDRLTGVAVVGVGLPQVGFERDIMKTYFDETGRGGFEYAFQFPGMNKVLQAGGRLIRSEQDRGVLLLIDDRYLQPSYRRLLPPEWLDYTLL
>NZ_CP048209.1|WP_162360160.1|6651604_6652690_-|AI-2E-family-transporter
MSLQKGFFRVCLGIIALLLIVYLTAKISFIFKPLLTIFNILIVPFMLAGFCYYLLRPVVSAMVKRRVNKMAAILLIYLFAAALLAVFVSVVWPTLQTQLENFVKGAPQLIAEFKDQLNQLQSSRWFSSFAVDEAALSTKLSDYLNQAITAASNYVSNVVSAVTNFIIIIATVPIILYYMLKGSGHISSSILAVVPRRFRKEGAEALREIDDALSGFIVGRVIITCLLAVMLYIGFLAIGLPYSLLLAIVAFFFNIIPYIGQFLGAIPTIIVAFTVSPTMVVWVVVVTVVAQLVESNVLSPSIYGRRLDIHPLTTIVLLLVAGDIAGILGVILAIPAYMVVKIIVVHVYRRFLADRVEDLVD
>NZ_CP048209.1|WP_162360742.1|6652864_6653314_-|phage-holin-family-protein
MDQSGNFSIIEFLYGEGDAVRAIMNALMFFVLLDWLTGVCAARKDSANVGKYGMDGIFRTFFILLLPAGGHLLDQALGQSGVIFGALSVGTLYLILQSMTANGLRAGWGDYFPEWLIGPIMQWVKSELEAKIQRATGRSGGDNEGSKNG
>NZ_CP048209.1|WP_162360161.1|6653563_6653941_-|hypothetical-protein
MADQGRTALLASVSQAEKARVKQLLKELAQTKRFIAAFEEEAERLGAEQLEQYERCKREVKLIERAIPAIPDDEVRRIVDYRFVKGHSYTATVRFFGGCMSDRTVERKLNEGIAFVARMLRMWRN
>NZ_CP048209.1|WP_162360162.1|6654275_6654692_+|helix-turn-helix-transcriptional-regulator
MLMERLKQRRKAMHYTQEQLAELVNAKKTTISNYETGYSSPNNEMLRDLADVLHTTVDYLLGRSDNPVSLEAAGAQAIPDFATRKDVKDFKTFLNQQEVMFDGVPLTAEEKARVLGYMESMFWDAKRMNKRPKRDSES
>NZ_CP048209.1|WP_162360163.1|6654706_6655120_+|ImmA/IrrE-family-metallo-endopeptidase
MNIEQLVRKLVRKHGTTDPFKLAAQMKVTVQILDLPCSCRGYYLRTLRRRFIAINQNLSDVWQRVVCAHELGHDQLHRGISRFFLDESSFFVAGRYETEANEFAVQLLLYNERPEEEESIDTYFMRHNIPTELTRYY
>NZ_CP048209.1|WP_090575021.1|6655205_6655406_-|cold-shock-protein
MQQGTVKWFNAEKGFGFIEVEGGNDVFVHFSAIVGEGFKTLDEGQRVEFNVVQGNRGPQAENVVKL
>NZ_CP048209.1|WP_162360743.1|6655709_6656723_-|thiazole-biosynthesis-adenylyltransferase-ThiF
MRRERYSRQMLFAPIGESGQRKIEAAHVAVVGMGALGTVIANHLARAGVGRLRLIDRDYVERSNLQRQMLYDEEDVMQLRPKVIAAERRLKLINGDVRIEPVVSHVTAANAEQLLEGVDLVVDGTDNFGTRLLVNDVCFKHGIPFIYGGSISSNGMTAVFVPGETSCLRCLIGAGDGAGDTCDTTGVISPIVDIVASLQAAEALKLLVGDHAARRRGLLTLDIWRNSTMEMKLPSPGAACPTCGLKQYPSLQAEGAALPVTLCGRETVQISGPRGLDLALVKEKLSRSCEVTANPYLLRAGLPEGERLVIFPDGRVLVQGTEDLSRAQSLYDRYIGS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	866511-866535	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278659-1278683	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278763-1278787	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278919-1278943	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279023-1279047	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279179-1279203	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279387-1279411	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1571819-1571843	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1677736-1677760	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1677840-1677864	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2996900-2996924	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2996952-2996976	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997004-2997028	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997316-2997340	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452470-5452494	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452522-5452546	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	6077072-6077096	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	6191915-6191939	0	1.0
NZ_CP048209_23	23.22\|6151089\|35\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6151089-6151123	35	NZ_CP048209.1	1192448-1192482	0	1.0
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278711-1278735	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278815-1278839	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1278971-1278995	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279231-1279255	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279335-1279359	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279439-1279463	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1571715-1571739	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1677684-1677708	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997056-2997080	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997212-2997236	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997264-2997288	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3075564-3075588	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3075616-3075640	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808132-3808156	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808183-3808207	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808235-3808259	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808286-3808310	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808338-3808362	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3808390-3808414	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	4807202-4807226	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132269-5132293	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132373-5132397	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132473-5132497	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132732-5132756	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452574-5452598	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452626-5452650	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	6077021-6077045	1	0.96
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	6191863-6191887	1	0.96
NZ_CP048209_1	1.12\|132116\|24\|NZ_CP048209\|CRT	132116-132139	24	NZ_CP048209.1	132182-132205	2	0.917
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	866563-866587	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279075-1279099	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279127-1279151	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1279283-1279307	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	1677788-1677812	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2996848-2996872	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997108-2997132	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	2997160-2997184	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3075668-3075692	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	929170-929194	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3022924-3022948	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	3807778-3807802	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	4807098-4807122	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132218-5132242	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132423-5132447	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132525-5132549	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5132629-5132653	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452314-5452338	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452366-5452390	2	0.92
NZ_CP048209_8	8.1\|1570179\|25\|NZ_CP048209\|CRISPRCasFinder	1570179-1570203	25	NZ_CP048209.1	5452418-5452442	2	0.92
NZ_CP048209_14	14.1\|4504731\|25\|NZ_CP048209\|CRISPRCasFinder	4504731-4504755	25	NZ_CP048209.1	813529-813553	2	0.92
NZ_CP048209_14	14.1\|4504731\|25\|NZ_CP048209\|CRISPRCasFinder	4504731-4504755	25	NZ_CP048209.1	813587-813611	2	0.92
NZ_CP048209_16	16.1\|4667646\|28\|NZ_CP048209\|CRISPRCasFinder	4667646-4667673	28	NZ_CP048209.1	5380413-5380440	2	0.929
NZ_CP048209_16	16.1\|4667646\|28\|NZ_CP048209\|CRISPRCasFinder	4667646-4667673	28	NZ_CP048209.1	6116639-6116666	2	0.929

1. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 866511-866535, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

2. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278659-1278683, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

3. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278763-1278787, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

4. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278919-1278943, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

5. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279023-1279047, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

6. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279179-1279203, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

7. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279387-1279411, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

8. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1571819-1571843, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

9. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1677736-1677760, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

10. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1677840-1677864, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

11. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2996900-2996924, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

12. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2996952-2996976, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

13. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997004-2997028, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

14. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997316-2997340, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

15. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452470-5452494, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

16. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452522-5452546, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

17. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 6077072-6077096, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

18. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 6191915-6191939, mismatch: 0, identity: 1.0

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccggca	Protospacer
*************************

19. spacer 23.22|6151089|35|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to position: 1192448-1192482, mismatch: 0, identity: 1.0

atctatcgcggctgaccgcaggactggaaggggcg	CRISPR spacer
atctatcgcggctgaccgcaggactggaaggggcg	Protospacer
***********************************

20. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278711-1278735, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccggca	Protospacer
********.****************

21. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278815-1278839, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccggca	Protospacer
********.****************

22. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1278971-1278995, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccggca	Protospacer
********.****************

23. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279231-1279255, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccgaca	Protospacer
**********************.**

24. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279335-1279359, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccggca	Protospacer
********.****************

25. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279439-1279463, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

26. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1571715-1571739, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaattttaccggca	Protospacer
**************.**********

27. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1677684-1677708, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

28. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997056-2997080, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccgaca	Protospacer
**********************.**

29. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997212-2997236, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

30. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997264-2997288, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccgaca	Protospacer
**********************.**

31. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3075564-3075588, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

32. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3075616-3075640, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

33. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808132-3808156, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaacttttccggca	Protospacer
****************** ******

34. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808183-3808207, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcggca	Protospacer
*******************.*****

35. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808235-3808259, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaacttttccggca	Protospacer
****************** ******

36. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808286-3808310, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcggca	Protospacer
*******************.*****

37. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808338-3808362, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcggca	Protospacer
*******************.*****

38. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3808390-3808414, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccgaca	Protospacer
**********************.**

39. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 4807202-4807226, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccggca	Protospacer
********.****************

40. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132269-5132293, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcggca	Protospacer
*******************.*****

41. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132373-5132397, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcggca	Protospacer
*******************.*****

42. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132473-5132497, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttaccgaca	Protospacer
**********************.**

43. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132732-5132756, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaacttttccggca	Protospacer
****************** ******

44. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452574-5452598, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttacctgca	Protospacer
********************* ***

45. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452626-5452650, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccggca	Protospacer
***.*********************

46. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 6077021-6077045, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttactggca	Protospacer
********************.****

47. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 6191863-6191887, mismatch: 1, identity: 0.96

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcagctttaccggca	Protospacer
*************.***********

48. spacer 1.12|132116|24|NZ_CP048209|CRT matches to position: 132182-132205, mismatch: 2, identity: 0.917

gccgttataataaaatgcttcatc	CRISPR spacer
gcctttataataaaatgctttatc	Protospacer
*** ****************.***

49. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 866563-866587, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccgaca	Protospacer
***.******************.**

50. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279075-1279099, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccgaca	Protospacer
********.*************.**

51. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279127-1279151, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccagca	Protospacer
********.************.***

52. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1279283-1279307, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccgaca	Protospacer
********.*************.**

53. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 1677788-1677812, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgtatagcaactttaccggca	Protospacer
****** *.****************

54. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2996848-2996872, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaactttaccgaca	Protospacer
********.*************.**

55. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997108-2997132, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaacttttccggca	Protospacer
********.********* ******

56. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 2997160-2997184, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaatagcaacttttccggca	Protospacer
********.********* ******

57. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3075668-3075692, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccgaca	Protospacer
***.******************.**

58. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 929170-929194, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaaccgcaacattaccggca	Protospacer
********* ***** *********

59. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3022924-3022948, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgatcagcaactttaccggca	Protospacer
***.*** *****************

60. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 3807778-3807802, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacggcaactttaccggca	Protospacer
***.*****.***************

61. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 4807098-4807122, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcttgaacagcagctttaccggca	Protospacer
****.********.***********

62. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132218-5132242, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttatcggca	Protospacer
***.***************.*****

63. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132423-5132447, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttatcggca	Protospacer
***.***************.*****

64. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132525-5132549, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcgtca	Protospacer
*******************.** **

65. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5132629-5132653, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgctcgaacagcaactttatcgtca	Protospacer
*******************.** **

66. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452314-5452338, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccgaca	Protospacer
***.******************.**

67. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452366-5452390, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttacctgca	Protospacer
***.***************** ***

68. spacer 8.1|1570179|25|NZ_CP048209|CRISPRCasFinder matches to position: 5452418-5452442, mismatch: 2, identity: 0.92

tgctcgaacagcaactttaccggca	CRISPR spacer
tgcccgaacagcaactttaccgaca	Protospacer
***.******************.**

69. spacer 14.1|4504731|25|NZ_CP048209|CRISPRCasFinder matches to position: 813529-813553, mismatch: 2, identity: 0.92

gaatgctgtatgtccaatctcgcga	CRISPR spacer
gaatgctgcatgtccaatcttgcga	Protospacer
********.***********.****

70. spacer 14.1|4504731|25|NZ_CP048209|CRISPRCasFinder matches to position: 813587-813611, mismatch: 2, identity: 0.92

gaatgctgtatgtccaatctcgcga	CRISPR spacer
gaatgctgcatgtccaatcttgcga	Protospacer
********.***********.****

71. spacer 16.1|4667646|28|NZ_CP048209|CRISPRCasFinder matches to position: 5380413-5380440, mismatch: 2, identity: 0.929

cttctttatgacgttttgtcgtgtgctg	CRISPR spacer
ctgctttatgacgttttttcgtgtgctg	Protospacer
** ************** **********

72. spacer 16.1|4667646|28|NZ_CP048209|CRISPRCasFinder matches to position: 6116639-6116666, mismatch: 2, identity: 0.929

cttctttatgacgttttgtcgtgtgctg	CRISPR spacer
cttctttatgacgttttttcgtatgctg	Protospacer
***************** ****.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048209_1	1.3\|131522\|24\|NZ_CP048209\|CRT	131522-131545	24	NZ_CP043609	Bacteroides fragilis strain GUT04 plasmid unnamed1, complete sequence	21489-21512	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	54644-54667	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	572635-572658	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	572683-572706	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	57867-57890	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_CP039703	Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence	681110-681133	3	0.875
NZ_CP048209_1	1.10\|131984\|24\|NZ_CP048209\|CRT	131984-132007	24	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	760816-760839	3	0.875
NZ_CP048209_1	1.12\|132116\|24\|NZ_CP048209\|CRT	132116-132139	24	MT446405	UNVERIFIED: Escherichia virus TH32, complete genome	44753-44776	3	0.875
NZ_CP048209_14	14.1\|4504731\|25\|NZ_CP048209\|CRISPRCasFinder	4504731-4504755	25	MN035803	Leviviridae sp. isolate H1_Bulk_30_scaffold_173 hypothetical protein (H1Bulk30173_000001) gene, partial cds; and RNA-dependent RNA polymerase (H1Bulk30173_000002), hypothetical protein (H1Bulk30173_000003), and hypothetical protein (H1Bulk30173_000004) genes, complete cds	244-268	3	0.88
NZ_CP048209_18	18.5\|4789068\|26\|NZ_CP048209\|CRT	4789068-4789093	26	NZ_CP021994	Cryobacterium sp. LW097 plasmid unnamed1	72076-72101	3	0.885
NZ_CP048209_1	1.11\|132050\|24\|NZ_CP048209\|CRT	132050-132073	24	NC_004566	Lactobacillus fermentum plasmid pLME300	1805-1828	4	0.833
NZ_CP048209_18	18.5\|4789068\|26\|NZ_CP048209\|CRT	4789068-4789093	26	NZ_LR134456	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence	110460-110485	4	0.846
NZ_CP048209_18	18.5\|4789068\|26\|NZ_CP048209\|CRT	4789068-4789093	26	HQ634153	Salicola phage CGphi29 genomic sequence	23760-23785	4	0.846
NZ_CP048209_7	7.1\|1300447\|58\|NZ_CP048209\|CRISPRCasFinder	1300447-1300504	58	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2548092-2548149	5	0.914
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MF072963	Citrobacter freundii strain P10159 plasmid pP10159-3, complete sequence	41322-41348	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_KU302800	Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence	41845-41871	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_KP726894	Enterobacter cloacae strain ECN49 plasmid pKPC-ECN49, complete sequence	13210-13236	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP047392	Serratia marcescens strain 1602 plasmid pKPC-2-HENAN1602, complete sequence	38059-38085	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NC_022078	Klebsiella pneumoniae JM45 plasmid p1, complete sequence	106907-106933	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NC_023331	Klebsiella pneumoniae strain HS062105 plasmid pHS062105-3, complete sequence	4102-4128	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP022276	Citrobacter freundii strain 18-1 plasmid pCKPC18-1, complete sequence	14975-15001	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	MN891680	Klebsiella pneumoniae strain A1718 plasmid pA1718-KPC, complete sequence	21706-21732	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	KJ653815	Klebsiella pneumoniae strain FOS18 plasmid pFOS18, complete sequence	19093-19119	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NC_015068	Yersinia pestis Java 9 plasmid pJARS36, complete sequence	33671-33697	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP042976	Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence	43119-43145	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP045060	Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence	25533-25559	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP045053	Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence	25537-25563	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_CP045057	Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence	25534-25560	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MH328007	Escherichia coli strain 86 plasmid pEC86, complete sequence	8262-8288	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MF156712	Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence	44635-44661	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MH328006	Citrobacter portucalensis strain 40 plasmid pCP40, complete sequence	9164-9190	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MF156709	Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence	44091-44117	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MF156710	Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence	44832-44858	5	0.815
NZ_CP048209_17	17.1\|4744617\|27\|NZ_CP048209\|CRISPRCasFinder	4744617-4744643	27	NZ_MF156711	Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence	44804-44830	5	0.815
NZ_CP048209_18	18.5\|4789068\|26\|NZ_CP048209\|CRT	4789068-4789093	26	NC_047902	Pseudomonas phage PMBT3, complete genome	64443-64468	5	0.808
NZ_CP048209_21	21.1\|5452165\|27\|NZ_CP048209\|CRISPRCasFinder	5452165-5452191	27	JN968479	Haloarcula hispanica icosahedral virus 2, complete genome	10254-10280	6	0.778
NZ_CP048209_17	17.2\|4744667\|28\|NZ_CP048209\|CRISPRCasFinder	4744667-4744694	28	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	213417-213444	7	0.75
NZ_CP048209_17	17.2\|4744667\|28\|NZ_CP048209\|CRISPRCasFinder	4744667-4744694	28	NC_017805	Deinococcus gobiensis I-0 plasmid P1, complete sequence	18988-19015	7	0.75
NZ_CP048209_22	22.5\|6138969\|33\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6138969-6139001	33	NZ_CP019876	Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence	55659-55691	8	0.758
NZ_CP048209_22	22.26\|6140361\|34\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6140361-6140394	34	KJ578761	Propionibacterium phage PHL041M10, complete genome	26590-26623	8	0.765
NZ_CP048209_23	23.8\|6150161\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150161-6150194	34	NZ_CP053689	Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence	187001-187034	8	0.765
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP050105	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence	66860-66892	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP020951	Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence	77452-77484	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP025508	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence	66770-66802	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP016289	Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence	212040-212072	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP050110	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence	66860-66892	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP030764	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence	603587-603619	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP022667	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence	570864-570896	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP053208	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence	87867-87899	8	0.758
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP050087	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence	66787-66819	8	0.758
NZ_CP048209_12	12.1\|3786190\|38\|NZ_CP048209\|CRISPRCasFinder	3786190-3786227	38	NZ_CP016083	Streptomyces sp. SAT1 plasmid unnamed3, complete sequence	203890-203927	9	0.763
NZ_CP048209_22	22.31\|6140697\|34\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6140697-6140730	34	MK380014	Klebsiella phage K1-ULIP33, complete genome	10179-10212	9	0.735
NZ_CP048209_22	22.38\|6141157\|33\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6141157-6141189	33	NZ_CP028348	Novosphingobium sp. THN1 plasmid pTHN, complete sequence	664506-664538	9	0.727
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP024314	Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence	1843881-1843914	9	0.735
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP050082	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence	87828-87860	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP050099	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence	64740-64772	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NC_008384	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence	76208-76240	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP025014	Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence	64266-64298	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP049732	Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence	88991-89023	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP053441	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence	64735-64767	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP054023	Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence	330382-330414	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	NZ_CP054033	Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence	490086-490118	9	0.727
NZ_CP048209_23	23.12\|6150425\|33\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150425-6150457	33	MH825699	Streptomyces phage Darolandstone, complete genome	1953-1985	9	0.727
NZ_CP048209_23	23.16\|6150690\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150690-6150723	34	NZ_CP021375	Rhizobium sp. ACO-34A plasmid pRACO34Aa, complete sequence	89102-89135	9	0.735
NZ_CP048209_23	23.22\|6151089\|35\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6151089-6151123	35	NZ_CP033583	Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence	164291-164325	9	0.743
NZ_CP048209_23	23.34\|6151880\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6151880-6151913	34	NZ_CP014598	Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence	122018-122051	9	0.735
NZ_CP048209_22	22.3\|6138837\|34\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6138837-6138870	34	NZ_CP041045	Paracoccus sp. AK26 plasmid pAK1, complete sequence	279536-279569	10	0.706
NZ_CP048209_22	22.28\|6140496\|34\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6140496-6140529	34	NZ_LR026973	Acinetobacter baumannii strain KCRI-43 isolate RDK37_43 plasmid pKCRI-43-1, complete sequence	26549-26582	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	CP052329	Klebsiella pneumoniae strain D17KP0032 plasmid pD17KP0032-1, complete sequence	125659-125692	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042356	Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence	18419-18452	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_LS992176	Citrobacter freundii isolate Citrobacter freundii str. E2614 plasmid 2, complete sequence	116654-116687	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP012989	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-SIL, complete sequence	5069-5102	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP030066	Klebsiella pneumoniae strain IA565 plasmid pDA11912.1, complete sequence	81363-81396	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NC_021501	Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence	18413-18446	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP023914	Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence	64416-64449	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP040598	Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence	71954-71987	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP014296	Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence	57773-57806	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	CP052139	Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence	71469-71502	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP023978	Klebsiella variicola strain X39 plasmid pX39-1, complete sequence	40039-40072	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP025683	Klebsiella pneumoniae strain L5-2 plasmid pL5201, complete sequence	70642-70675	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042350	Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence	18088-18121	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042354	Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence	18368-18401	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042353	Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence	17836-17869	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042351	Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence	17836-17869	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MF042352	Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence	17836-17869	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KY399975	Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence	12976-13009	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KY399974	Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence	12976-13009	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KR351290	Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence	11272-11305	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KJ812998	Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence	11206-11239	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KP900016	Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence	31688-31721	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KP868647	Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence	12977-13010	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP012994	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-SIL, complete sequence	104802-104835	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_KC887916	Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence	11206-11239	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP041645	Klebsiella pneumoniae strain NKU_Kleb8A7 plasmid pKleb8A7, complete sequence	44275-44308	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NC_025184	Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence	92339-92372	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP022350	Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence	60541-60574	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_AP018757	Metakosakonia sp. MRY16-398 plasmid pMRY16-398_1, complete sequence	65929-65962	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	MG516909	Escherichia coli plasmid pEc1675, complete sequence	36484-36517	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	MK933278	Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence	92339-92372	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP032173	Klebsiella pneumoniae strain AR_0160 plasmid unnamed1, complete sequence	35929-35962	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP023187	Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence	99102-99135	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_LT883141	Escherichia coli isolate 6666666.257727.embl plasmid III	6686-6719	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_LT883141	Escherichia coli isolate 6666666.257727.embl plasmid III	121479-121512	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MK167989	Klebsiella pneumoniae strain 6YF2CTX plasmid pHNYF2-1, complete sequence	17766-17799	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MH909345	Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence	43132-43165	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_MG462729	Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence	11206-11239	10	0.706
NZ_CP048209_23	23.11\|6150359\|34\|NZ_CP048209\|CRT,PILER-CR,CRISPRCasFinder	6150359-6150392	34	NZ_CP035537	Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence	11366-11399	10	0.706
NZ_CP048209_22	22.32\|6140763\|33\|NZ_CP048209\|CRT,CRISPRCasFinder,PILER-CR	6140763-6140795	33	NZ_CP046053	Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence	113443-113475	11	0.667

1. spacer 1.3|131522|24|NZ_CP048209|CRT matches to NZ_CP043609 (Bacteroides fragilis strain GUT04 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

ttggttagtagcaaatgcataagc	CRISPR spacer
caggttagtagcaaatacataagc	Protospacer
. **************.*******

2. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

3. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

4. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

5. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

6. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_CP039703 (Clostridium butyricum strain 29-1 plasmid p-butyl_plas_29-1, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

7. spacer 1.10|131984|24|NZ_CP048209|CRT matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 3, identity: 0.875

gctgttagcagaaaatgcagaaga	CRISPR spacer
tctttcagcagaaaatgcagaaga	Protospacer
 ** *.******************

8. spacer 1.12|132116|24|NZ_CP048209|CRT matches to MT446405 (UNVERIFIED: Escherichia virus TH32, complete genome) position: , mismatch: 3, identity: 0.875

gccgttataataaaatgcttcatc	CRISPR spacer
ggagttataatacaatgcttcatc	Protospacer
*  ********* ***********

9. spacer 14.1|4504731|25|NZ_CP048209|CRISPRCasFinder matches to MN035803 (Leviviridae sp. isolate H1_Bulk_30_scaffold_173 hypothetical protein (H1Bulk30173_000001) gene, partial cds; and RNA-dependent RNA polymerase (H1Bulk30173_000002), hypothetical protein (H1Bulk30173_000003), and hypothetical protein (H1Bulk30173_000004) genes, complete cds) position: , mismatch: 3, identity: 0.88

gaatgctgtatgtccaatctcgcga	CRISPR spacer
tagtgctgtatctccaatctcgcga	Protospacer
 *.******** *************

10. spacer 18.5|4789068|26|NZ_CP048209|CRT matches to NZ_CP021994 (Cryobacterium sp. LW097 plasmid unnamed1) position: , mismatch: 3, identity: 0.885

tcagctgcctggcccacg--cggtcagc	CRISPR spacer
tcagctgcctggcccacgcacggtcg--	Protospacer
******************  *****.

11. spacer 1.11|132050|24|NZ_CP048209|CRT matches to NC_004566 (Lactobacillus fermentum plasmid pLME300) position: , mismatch: 4, identity: 0.833

gctgttatgataaaatgaagattt	CRISPR spacer
tcatttatgataaaatgaagattg	Protospacer
 *  *******************

12. spacer 18.5|4789068|26|NZ_CP048209|CRT matches to NZ_LR134456 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 14, complete sequence) position: , mismatch: 4, identity: 0.846

tcagctgcctggcccacgcggtcagc	CRISPR spacer
gcagctgcgtggcccacgcggtcgac	Protospacer
 ******* **************..*

13. spacer 18.5|4789068|26|NZ_CP048209|CRT matches to HQ634153 (Salicola phage CGphi29 genomic sequence) position: , mismatch: 4, identity: 0.846

tcagctgcctggcccacgcggtcagc	CRISPR spacer
ccagctgcctggcccacgccggcacc	Protospacer
.****************** * ** *

14. spacer 7.1|1300447|58|NZ_CP048209|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.914

gtaatcagtaggtcgtgggttcgactcctatcgccggcaccatttttgcttgagccat	CRISPR spacer
gtaatcagtaggtcgtgggttcgactcctatcgccggcaccatttttcctcgagggtt	Protospacer
*********************************************** **.***   *

15. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MF072963 (Citrobacter freundii strain P10159 plasmid pP10159-3, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

16. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_KU302800 (Enterobacter cloacae strain SZECL1 plasmid pKPC3_SZ clone ST231, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

17. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_KP726894 (Enterobacter cloacae strain ECN49 plasmid pKPC-ECN49, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

18. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP047392 (Serratia marcescens strain 1602 plasmid pKPC-2-HENAN1602, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

19. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NC_022078 (Klebsiella pneumoniae JM45 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

20. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NC_023331 (Klebsiella pneumoniae strain HS062105 plasmid pHS062105-3, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

21. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP022276 (Citrobacter freundii strain 18-1 plasmid pCKPC18-1, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

22. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to MN891680 (Klebsiella pneumoniae strain A1718 plasmid pA1718-KPC, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

23. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to KJ653815 (Klebsiella pneumoniae strain FOS18 plasmid pFOS18, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

24. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NC_015068 (Yersinia pestis Java 9 plasmid pJARS36, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

25. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP042976 (Klebsiella pneumoniae strain KPN55602 plasmid pK55602_2, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

26. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP045060 (Salmonella enterica subsp. enterica serovar Muenchen strain LG26 plasmid pLG26p1, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgaataca	Protospacer
********* ***********   * *

27. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP045053 (Salmonella enterica subsp. enterica serovar Muenchen strain LG24 plasmid pLG24p1, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgaataca	Protospacer
********* ***********   * *

28. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_CP045057 (Salmonella enterica subsp. enterica serovar Muenchen strain LG25 plasmid pLG25p1, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgaataca	Protospacer
********* ***********   * *

29. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MH328007 (Escherichia coli strain 86 plasmid pEC86, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

30. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MF156712 (Morganella morganii strain GN28 plasmid pGN28-KPC, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

31. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MH328006 (Citrobacter portucalensis strain 40 plasmid pCP40, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtata	Protospacer
********* ***********   * *

32. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MF156709 (Klebsiella aerogenes strain E20 plasmid pE20-KPC, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

33. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MF156710 (Proteus mirabilis strain GN2 plasmid pGN2-KPC, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

34. spacer 17.1|4744617|27|NZ_CP048209|CRISPRCasFinder matches to NZ_MF156711 (Serratia marcescens strain GN26 plasmid pGN26-KPC, complete sequence) position: , mismatch: 5, identity: 0.815

tgtggtttttccgccctgacgccgaaa	CRISPR spacer
tgtggttttaccgccctgacgagtaca	Protospacer
********* ***********   * *

35. spacer 18.5|4789068|26|NZ_CP048209|CRT matches to NC_047902 (Pseudomonas phage PMBT3, complete genome) position: , mismatch: 5, identity: 0.808

tcagctgcctggcccacgcggtcagc	CRISPR spacer
tcagctgcctggcccacgctgttctg	Protospacer
******************* **.

36. spacer 21.1|5452165|27|NZ_CP048209|CRISPRCasFinder matches to JN968479 (Haloarcula hispanica icosahedral virus 2, complete genome) position: , mismatch: 6, identity: 0.778

gaatcgcccgttaccgaggcgaaaaga	CRISPR spacer
gaatcgcccgaaaccgaggcgaacccc	Protospacer
**********  ***********

37. spacer 17.2|4744667|28|NZ_CP048209|CRISPRCasFinder matches to NZ_CP032678 (Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence) position: , mismatch: 7, identity: 0.75

cgaggatccccagccctgagcgccgaat	CRISPR spacer
accgtatccccagccctcagcgccgatc	Protospacer
   * ************ ******** .

38. spacer 17.2|4744667|28|NZ_CP048209|CRISPRCasFinder matches to NC_017805 (Deinococcus gobiensis I-0 plasmid P1, complete sequence) position: , mismatch: 7, identity: 0.75

cgaggatccccagccctgagcgccgaat	CRISPR spacer
gcgcgctcccccgccctgagcgccgaac	Protospacer
  . * ***** ***************.

39. spacer 22.5|6138969|33|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP019876 (Komagataeibacter nataicola strain RZS01 plasmid pKNA01, complete sequence) position: , mismatch: 8, identity: 0.758

tttggatgcatggaactttaatacgaatgcggt	CRISPR spacer
ccgggatgcatggaaatataatacgaattcagg	Protospacer
.. ************ * ********** *.*

40. spacer 22.26|6140361|34|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to KJ578761 (Propionibacterium phage PHL041M10, complete genome) position: , mismatch: 8, identity: 0.765

aagcaacgaaaagaaatcctgatggattacgacg	CRISPR spacer
aagcaacgaaaaggaatcatgatgcagaagatcg	Protospacer
*************.**** ***** *  * . **

41. spacer 23.8|6150161|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053689 (Arthrobacter citreus strain NEB 577 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.765

gtcttccggtattttgttctttttgattatcgca	CRISPR spacer
aacatctggtattttgttctctttgattgatgca	Protospacer
. * **.*************.*******. .***

42. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050105 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b6, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggctcca	Protospacer
********* *********** **..*. *  *

43. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP020951 (Rhizobium sp. CIAT894 plasmid pRheCIAT894d, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacatcgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

44. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025508 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvB, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

45. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP016289 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

46. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050110 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b4, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggctcca	Protospacer
********* *********** **..*. *  *

47. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030764 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

48. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022667 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR2, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

49. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053208 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1B, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

50. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050087 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b5, complete sequence) position: , mismatch: 8, identity: 0.758

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttca	Protospacer
********* *********** **..*. *  *

51. spacer 12.1|3786190|38|NZ_CP048209|CRISPRCasFinder matches to NZ_CP016083 (Streptomyces sp. SAT1 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.763

ctccttgtcgattccaccgatagtcgttgctgctcgct	CRISPR spacer
cgcccgcgccgttccaccggtagtcgttgccgctcgct	Protospacer
* **.   * .********.**********.*******

52. spacer 22.31|6140697|34|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to MK380014 (Klebsiella phage K1-ULIP33, complete genome) position: , mismatch: 9, identity: 0.735

gtcgcggaagcgcggaaacggctcaaggaaaacg	CRISPR spacer
gaccaggaagcgcgggagcggctcaaggagtggg	Protospacer
* *  **********.*.***********. . *

53. spacer 22.38|6141157|33|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP028348 (Novosphingobium sp. THN1 plasmid pTHN, complete sequence) position: , mismatch: 9, identity: 0.727

gaaaccgaacgcttcaacaacgacatgctaaat	CRISPR spacer
gtcaccgaacgcctcaacaacgtcatggccgac	Protospacer
*  *********.********* **** . .*.

54. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024314 (Rhizobium sp. NXC24 plasmid pRspNXC24c, complete sequence) position: , mismatch: 9, identity: 0.735

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
caagagcaaccaaatcggtcttgcgggtaaccag	Protospacer
 .*  ************.*.********* * *

55. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttcc	Protospacer
********* *********** **..*. *

56. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050099 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b5, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttcc	Protospacer
********* *********** **..*. *

57. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NC_008384 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttcc	Protospacer
********* *********** **..*. *

58. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025014 (Rhizobium leguminosarum strain Norway plasmid pRLN2, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggtttcc	Protospacer
********* *********** **..*. *

59. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP049732 (Rhizobium leguminosarum strain A1 plasmid pRL11, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttcc	Protospacer
********* *********** **..*. *

60. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP053441 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eE, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggcttcc	Protospacer
********* *********** **..*. *

61. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP054023 (Rhizobium sp. JKLM12A2 plasmid pPR12A202, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggtttcc	Protospacer
********* *********** **..*. *

62. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP054033 (Rhizobium sp. JKLM13E plasmid pPR13E02, complete sequence) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacattgagcggcacgatccagggtttcc	Protospacer
********* *********** **..*. *

63. spacer 23.12|6150425|33|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to MH825699 (Streptomyces phage Darolandstone, complete genome) position: , mismatch: 9, identity: 0.727

gcggcacatagagcggcacgaaccgagagtaaa	CRISPR spacer
gcggcacttcgagcggcacgaacccggccgcat	Protospacer
******* * ************** .*    *

64. spacer 23.16|6150690|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021375 (Rhizobium sp. ACO-34A plasmid pRACO34Aa, complete sequence) position: , mismatch: 9, identity: 0.735

ccgatcttcatgaccgcttgcccgtgatcaggag	CRISPR spacer
atgatcttcatgacagcttccccgtgacgaaggc	Protospacer
 .************ **** *******. *.*.

65. spacer 23.22|6151089|35|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033583 (Streptomyces sp. ADI95-16 plasmid pADI95-16b, complete sequence) position: , mismatch: 9, identity: 0.743

atctatcgcggctgaccgcaggactggaaggggcg	CRISPR spacer
actcgctgtggctgaccgcaggactggaaccggcg	Protospacer
*......*.********************  ****

66. spacer 23.34|6151880|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014598 (Yangia sp. CCB-MM3 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.735

ggaaatcgagcggcttcgcggattgtatgagcag	CRISPR spacer
cgaaatcgggcggcttcgcgaattgtccgacggc	Protospacer
 *******.***********.***** .**  .

67. spacer 22.3|6138837|34|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP041045 (Paracoccus sp. AK26 plasmid pAK1, complete sequence) position: , mismatch: 10, identity: 0.706

gatgcgctgatgcccatgcgttctgcgtcccgta	CRISPR spacer
ttggcgctgatgcccatgcgatcttcgcgcaatc	Protospacer
   ***************** *** **. * .*

68. spacer 22.28|6140496|34|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to NZ_LR026973 (Acinetobacter baumannii strain KCRI-43 isolate RDK37_43 plasmid pKCRI-43-1, complete sequence) position: , mismatch: 10, identity: 0.706

gtcgttcgttaacccaaatcagtatggctcgacg	CRISPR spacer
gataatctttaacccaaatcagtgtggcttcata	Protospacer
* .. ** ***************.*****. *..

69. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to CP052329 (Klebsiella pneumoniae strain D17KP0032 plasmid pD17KP0032-1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

70. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042356 (Enterobacter cloacae strain 20ES plasmid pNDM_20ES, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

71. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LS992176 (Citrobacter freundii isolate Citrobacter freundii str. E2614 plasmid 2, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

72. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012989 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-SIL, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

73. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP030066 (Klebsiella pneumoniae strain IA565 plasmid pDA11912.1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

74. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NC_021501 (Klebsiella michiganensis E718 plasmid pKOX_NDM1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

75. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023914 (Klebsiella pneumoniae strain FDAARGOS_439 plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

76. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP040598 (Klebsiella pneumoniae subsp. pneumoniae strain KpvST15_NDM plasmid pKpvST15_NDM-1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

77. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP014296 (Klebsiella pneumoniae strain KP38731 plasmid unnamed11 sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

78. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to CP052139 (Klebsiella pneumoniae strain F17KP0040 plasmid pF17KP0040-1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

79. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023978 (Klebsiella variicola strain X39 plasmid pX39-1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

80. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025683 (Klebsiella pneumoniae strain L5-2 plasmid pL5201, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

81. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042350 (Klebsiella pneumoniae strain 18ES plasmid pNDM_18ES, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

82. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042354 (Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

83. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042353 (Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

84. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042351 (Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

85. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF042352 (Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

86. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KY399975 (Enterobacter cloacae strain EClY2403 plasmid pNDM1_EClY2403, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

87. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KY399974 (Enterobacter cloacae strain EClY2402 plasmid pNDM1_EClY2402, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

88. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KR351290 (Klebsiella pneumoniae subsp. pneumoniae strain K351 plasmid pK351, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

89. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KJ812998 (Enterobacter cloacae isolate GN574 plasmid pNDM-Ec1GN574, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

90. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KP900016 (Leclercia adecarboxylata strain P10164 plasmid pP10164-NDM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

91. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KP868647 (Enterobacter cloacae strain WCHECl-14653 plasmid pNDM1_EC14653, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

92. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP012994 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-SIL, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

93. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KC887916 (Escherichia coli strain ARL10/167 isolate EC4 plasmid pEC4-NDM-6, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

94. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP041645 (Klebsiella pneumoniae strain NKU_Kleb8A7 plasmid pKleb8A7, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

95. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NC_025184 (Klebsiella pneumoniae strain RJF866 plasmid pRJF866, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

96. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022350 (Klebsiella michiganensis strain K516 plasmid pK516_NDM1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

97. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP018757 (Metakosakonia sp. MRY16-398 plasmid pMRY16-398_1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

98. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to MG516909 (Escherichia coli plasmid pEc1675, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

99. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to MK933278 (Enterobacter hormaechei strain SCNJ07 plasmid pNDM-SCNJ07, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

100. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP032173 (Klebsiella pneumoniae strain AR_0160 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

101. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023187 (Klebsiella michiganensis strain K518 plasmid pK518_NDM1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

102. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT883141 (Escherichia coli isolate 6666666.257727.embl plasmid III) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

103. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT883141 (Escherichia coli isolate 6666666.257727.embl plasmid III) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

104. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MK167989 (Klebsiella pneumoniae strain 6YF2CTX plasmid pHNYF2-1, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

105. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MH909345 (Klebsiella pneumoniae strain N201205880 plasmid p205880-NDM, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

106. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG462729 (Escherichia coli strain AMA1742 plasmid pAMA1742, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

107. spacer 23.11|6150359|34|NZ_CP048209|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP035537 (Klebsiella pneumoniae subsp. pneumoniae strain CCRI-22199 plasmid pKp199-2, complete sequence) position: , mismatch: 10, identity: 0.706

ggatcgcaaccaaatcgattttgcgggtatcgac	CRISPR spacer
gccgggcaaccagatcgattttacgggtacagga	Protospacer
*    *******.*********.******. *.

108. spacer 22.32|6140763|33|NZ_CP048209|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP046053 (Methylocystis heyeri strain H2 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.667

gcaggcgttcctacactgccgcagccaacagca	CRISPR spacer
agcttcgatcctacgctgccgcagccaaccagg	Protospacer
.    ** ******.************** . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

963709 : 975293

Enterobacteria_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162355331.1\|963709_965683_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.1e-11	38.2
WP_162355332.1\|965716_967321_+	hypothetical protein	NA	NA	NA	NA
WP_162355333.1\|967379_968246_+	hypothetical protein	NA	NA	NA	NA
WP_162355334.1\|968277_971166_+	glycosyltransferase	A0A0N9QZQ5	Chrysochromulina_ericina_virus	2.0e-38	27.2
WP_162355335.1\|971200_972085_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	5.2e-83	55.4
WP_162355336.1\|972109_972844_+	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	3.0e-44	43.0
WP_162355337.1\|972874_973441_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.5e-38	42.6
WP_162355338.1\|973437_974427_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.2e-74	45.7
WP_162355339.1\|974423_975293_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	3.0e-35	35.5

DBSCAN-SWA_2

1026846 : 1040851

Synechococcus_phage(30.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162355377.1\|1026846_1027728_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.1e-22	31.5
WP_162355378.1\|1028303_1028789_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.4e-18	50.0
WP_162355379.1\|1028785_1029958_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_162355380.1\|1029961_1031257_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.8e-21	27.1
WP_162355381.1\|1031497_1032385_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	4.1e-40	33.9
WP_161744390.1\|1032879_1033122_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	1.4e-06	36.4
WP_162355382.1\|1033126_1033822_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_162355383.1\|1033799_1036043_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.8e-160	43.1
WP_162355384.1\|1036027_1037506_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.9e-55	33.3
WP_162355385.1\|1037820_1038867_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	1.8e-71	44.6
WP_162355386.1\|1038866_1039496_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.7e-27	36.0
WP_162355387.1\|1039672_1040851_+	phosphoribosylaminoimidazolecarboxamide formyltransferase	S4VT61	Pandoravirus	1.0e-14	24.8

DBSCAN-SWA_3

2615668 : 2624450

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162356752.1\|2615668_2616100_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	8.8e-20	46.1
WP_162356754.1\|2616530_2617745_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.1e-51	34.8
WP_162356756.1\|2617819_2618500_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.3e-37	43.3
WP_162356758.1\|2618571_2619825_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	4.1e-118	53.8
WP_162356760.1\|2619875_2620346_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.5e-41	55.0
WP_162356761.1\|2620417_2621200_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	9.7e-09	38.0
WP_162356763.1\|2621165_2621861_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-13	30.6
WP_162356764.1\|2621956_2622658_+	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_162356765.1\|2622769_2623219_+	sporulation protein YtfJ	NA	NA	NA	NA
WP_162356766.1\|2623364_2624450_+	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	1.6e-09	34.7

DBSCAN-SWA_4

2777821 : 2785020

Thermus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162357019.1\|2777821_2778256_-	helix-turn-helix transcriptional regulator	A0A0K2CNN8	Brevibacillus_phage	1.8e-09	52.5
WP_162357021.1\|2778410_2778641_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162357023.1\|2778652_2778892_+	hypothetical protein	NA	NA	NA	NA
WP_162360448.1\|2779205_2779517_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_162357025.1\|2779500_2779704_+	hypothetical protein	NA	NA	NA	NA
WP_162357027.1\|2780242_2780503_+	hypothetical protein	NA	NA	NA	NA
WP_162357029.1\|2780594_2781554_+	hypothetical protein	S6C475	Thermus_phage	1.6e-74	46.6
WP_162357030.1\|2781557_2782451_+	recombination protein RecT	S6AVW6	Thermus_phage	1.7e-78	56.8
WP_162357031.1\|2782450_2782690_+	hypothetical protein	NA	NA	NA	NA
WP_162357032.1\|2782664_2783285_+	3'-5' exonuclease	G3MAD3	Bacillus_virus	3.1e-18	37.0
WP_162357033.1\|2783312_2784269_+	HTH domain-containing protein	S6BFM4	Thermus_phage	8.7e-36	33.7
WP_162360449.1\|2784375_2785020_+	ATP-binding protein	S6B1M2	Thermus_phage	4.0e-53	52.1

DBSCAN-SWA_5

4081996 : 4090079

Bacillus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162358101.1\|4081996_4082860_-	carbon-nitrogen hydrolase family protein	M1H2P4	Paramecium_bursaria_Chlorella_virus	2.2e-06	22.3
WP_162358102.1\|4082901_4084260_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	6.6e-21	33.2
WP_162358103.1\|4084256_4084955_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-31	33.3
WP_162358104.1\|4085298_4086981_-	serine/threonine protein kinase	A0A2P1EMR8	Moumouvirus	1.7e-18	28.9
WP_162360538.1\|4087113_4088085_-	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_162358105.1\|4088133_4088913_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	2.9e-13	28.8
WP_162358106.1\|4088931_4089240_-	cell division protein FtsJ	A0A0A0RP18	Bacillus_phage	6.1e-07	39.3
WP_162358107.1\|4089248_4090079_-	deoxyribonuclease IV	A0A2L2DJK8	Acanthamoeba_polyphaga_mimivirus	5.5e-18	25.9

DBSCAN-SWA_6

4125796 : 4150299

Brevibacillus_phage(36.84%)

integrase,terminase

attL 4135188:4135203|attR 4154159:4154174

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162358143.1\|4125796_4127902_-	hypothetical protein	A0A1B1IVA5	uncultured_Mediterranean_phage	3.4e-24	24.8
WP_162358144.1\|4127917_4128112_-	hypothetical protein	NA	NA	NA	NA
WP_162358145.1\|4128123_4128372_-	hypothetical protein	NA	NA	NA	NA
WP_162358146.1\|4128368_4129766_-\|terminase	PBSX family phage terminase large subunit	A1EAE1	Streptococcus_phage	1.1e-71	49.8
WP_162360539.1\|4129981_4130407_-\|terminase	terminase small subunit	A0A0K2CNQ5	Brevibacillus_phage	2.5e-43	65.2
WP_162358147.1\|4130694_4131114_-	transcriptional regulator	A0A2I7SC40	Paenibacillus_phage	1.3e-47	62.0
WP_162358148.1\|4131129_4132506_-	DEAD/DEAH box helicase	S5MA26	Brevibacillus_phage	2.0e-166	62.9
WP_162360540.1\|4132502_4132784_-	VRR-NUC domain-containing protein	S5MUC8	Brevibacillus_phage	8.5e-16	48.3
WP_162358149.1\|4133066_4135433_-	virulence protein E	S5M5Y2	Brevibacillus_phage	2.0e-254	54.2
4135188:4135203	attL	NA	NA	NA	NA
WP_162358150.1\|4135439_4135685_-	DUF3310 domain-containing protein	A0A291LBF7	Klebsiella_phage	9.4e-19	62.3
WP_162358151.1\|4135767_4136235_-	hypothetical protein	NA	NA	NA	NA
WP_162358152.1\|4136358_4136553_+	hypothetical protein	NA	NA	NA	NA
WP_162358153.1\|4136605_4136968_+	hypothetical protein	NA	NA	NA	NA
WP_162358154.1\|4137139_4137352_-	hypothetical protein	NA	NA	NA	NA
WP_162358155.1\|4137504_4137708_-	hypothetical protein	NA	NA	NA	NA
WP_162358156.1\|4138218_4140183_-	hypothetical protein	S5M5X4	Brevibacillus_phage	2.4e-213	57.2
WP_162358157.1\|4140179_4140806_-	hypothetical protein	NA	NA	NA	NA
WP_162360541.1\|4140802_4141174_-	hypothetical protein	G1JWL3	Mycobacterium_phage	1.3e-19	44.6
WP_162358158.1\|4141267_4141849_-	DUF2815 family protein	A0A2I7QIM8	Bacillus_phage	2.7e-56	61.7
WP_162358159.1\|4141896_4142280_-	hypothetical protein	U5JA60	Bacillus_phage	1.5e-42	68.9
WP_162358160.1\|4142276_4143473_-	DUF2800 domain-containing protein	S5MUB5	Brevibacillus_phage	1.2e-106	51.8
WP_162358161.1\|4143469_4143895_-	hypothetical protein	NA	NA	NA	NA
WP_162358162.1\|4143919_4144222_-	hypothetical protein	NA	NA	NA	NA
WP_162358163.1\|4144214_4144418_-	hypothetical protein	NA	NA	NA	NA
WP_162358164.1\|4144414_4145341_-	hypothetical protein	NA	NA	NA	NA
WP_162358165.1\|4145387_4145564_-	hypothetical protein	NA	NA	NA	NA
WP_162358166.1\|4145664_4145889_+	hypothetical protein	A0A0A7RTK6	Clostridium_phage	1.4e-16	56.9
WP_162358167.1\|4145873_4146050_-	hypothetical protein	NA	NA	NA	NA
WP_162358168.1\|4146080_4146350_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_162360542.1\|4146346_4146586_-	hypothetical protein	NA	NA	NA	NA
WP_162358169.1\|4146591_4146741_-	hypothetical protein	NA	NA	NA	NA
WP_162358170.1\|4146793_4147573_-	Rha family transcriptional regulator	A0A0C5ACA1	Paenibacillus_phage	1.6e-35	70.5
WP_162358171.1\|4147569_4147848_-	group-specific protein	S5MC08	Brevibacillus_phage	2.6e-25	59.3
WP_162358172.1\|4147899_4148091_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_162358173.1\|4148246_4148573_+	helix-turn-helix domain-containing protein	A0A1B1P7L1	Bacillus_phage	2.0e-16	64.1
WP_162358174.1\|4148573_4149065_+	ImmA/IrrE family metallo-endopeptidase	R9TQI1	Paenibacillus_phage	4.9e-35	55.4
WP_162358175.1\|4149138_4150299_+\|integrase	site-specific integrase	A0A0S2SXP1	Bacillus_phage	1.7e-54	58.9
4154159:4154174	attR	NA	NA	NA	NA

DBSCAN-SWA_7

5017236 : 5026029

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_162358838.1\|5017236_5018205_-	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	3.2e-17	39.3
WP_162358839.1\|5018416_5019652_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	4.3e-27	26.5
WP_162358840.1\|5019857_5020595_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.6e-77	56.0
WP_162358841.1\|5020737_5023881_-	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	4.0e-69	24.0
WP_162360616.1\|5023973_5025263_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.1e-64	44.8
WP_162358842.1\|5025345_5026029_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.7e-68	55.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048209

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection