CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP039729	Enterococcus faecium strain ZY2 chromosome, complete genome	1 crisprs	DEDDh,cas2,cas14j,DinG,cas3,csa3,RT	0	0	12	0
NZ_CP039730	Enterococcus faecium strain ZY2 plasmid pZY2	1 crisprs	c2c10_CAS-V-U3,cas14j	0	2	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP039729_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039729_1

2292059-2292168

Orphan

Consensus_repeat	Method
CTTTGCTCAACCAGTATTATTCATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP039729_1

>merge|NZ_CP039729|1|2292059-2292168|CRISPRCasFinder
CTTTGCTCAACCAGTATTATTCATCACCTATTCACTTCGTTCATAGTGATTCTACTCGCTTTGCTCGAAAGGAAACTCCTTTCGCTTTGCTCAACCAGTATTGTTCATCA

>NZ_CP039729|1|1|2292059-2292168|CRISPRCasFinder
CTTTGCTCAACCAGTATTATTCATCA	CCTATTCACTTCGTTCATAGTGATTCTACTCGCTTTGCTCGAAAGGAAACTCCTTTCG
CTTTGCTCAACCAGTATTGTTCATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039729.1\|WP_002291638.1\|2293188_2293611_-\|50S-ribosomal-protein-L11	unknown	unknown	gnl\|CDD\|234661
NZ_CP039729.1\|WP_002294583.1\|2295597_2296617_-\|L-lactate-oxidase	unknown	unknown	gnl\|CDD\|240088
NZ_CP039729.1\|WP_002294585.1\|2293953_2294622_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_CP039729.1\|WP_002294581.1\|2296789_2297677_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|283645
NZ_CP039729.1\|WP_002294577.1\|2298907_2299552_+\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341358
NZ_CP039729.1\|WP_002294580.1\|2297753_2298299_-\|transcription-termination/antitermination-protein-NusG	unknown	unknown	gnl\|CDD\|180161
NZ_CP039729.1\|WP_002294578.1\|2298593_2298746_-\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|234783
NZ_CP039729.1\|WP_002287792.1\|2282855_2283821_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027
NZ_CP039729.1\|WP_002290558.1\|2287259_2288792_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP039729.1\|WP_002294579.1\|2298399_2298570_-\|preprotein-translocase-subunit-SecE	unknown	unknown	gnl\|CDD\|376355
NZ_CP039729.1\|WP_002287788.1\|2285357_2286071_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP039729.1\|WP_002294587.1\|2292395_2293085_-\|50S-ribosomal-protein-L1	unknown	unknown	gnl\|CDD\|180071
NZ_CP039729.1\|WP_002294584.1\|2294634_2295507_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP039729.1\|WP_002294588.1\|2291061_2291430_-\|50S-ribosomal-protein-L7/L12	unknown	unknown	gnl\|CDD\|234671
NZ_CP039729.1\|WP_002303469.1\|2280646_2282806_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|180921
NZ_CP039729.1\|WP_002294589.1\|2290266_2290956_-\|TVP38/TMEM64-family-protein	unknown	unknown	gnl\|CDD\|223475
NZ_CP039729.1\|WP_002303471.1\|2288982_2290185_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882
NZ_CP039729.1\|WP_002287787.1\|2286324_2287026_-\|glucosamine-6-phosphate-deaminase	unknown	unknown	gnl\|CDD\|238693
NZ_CP039729.1\|WP_002294593.1\|2283909_2285049_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP039729.1\|WP_002291634.1\|2291482_2291986_-\|50S-ribosomal-protein-L10	unknown	unknown	gnl\|CDD\|234632

Protein	Function_ID	Function_description	E-value
NZ_CP039729.1\|WP_002291638.1\|2293188_2293611_-\|50S-ribosomal-protein-L11	gnl\|CDD\|234661	PRK00140, rplK, 50S ribosomal protein L11; Validated.	9.059e-96
NZ_CP039729.1\|WP_002294583.1\|2295597_2296617_-\|L-lactate-oxidase	gnl\|CDD\|240088	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain. LOX is a member of the family of FMN-containing alpha-hydroxyacid oxidases and catalyzes the oxidation of l-lactate using molecular oxygen to generate pyruvate and H2O2. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).	0
NZ_CP039729.1\|WP_002294585.1\|2293953_2294622_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.41351e-73
NZ_CP039729.1\|WP_002294581.1\|2296789_2297677_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|283645	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915). This family consists of several bacterial proteins of unknown function. Members of this family have an alpha/beta hydrolase fold.	4.81944e-80
NZ_CP039729.1\|WP_002294577.1\|2298907_2299552_+\|CBS-domain-containing-protein	gnl\|CDD\|341358	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	5.69774e-14
NZ_CP039729.1\|WP_002294580.1\|2297753_2298299_-\|transcription-termination/antitermination-protein-NusG	gnl\|CDD\|180161	PRK05609, nusG, transcription antitermination protein NusG; Validated.	1.97252e-86
NZ_CP039729.1\|WP_002294578.1\|2298593_2298746_-\|50S-ribosomal-protein-L33	gnl\|CDD\|234783	PRK00504, rpmG, 50S ribosomal protein L33; Validated.	3.12722e-17
NZ_CP039729.1\|WP_002287792.1\|2282855_2283821_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0
NZ_CP039729.1\|WP_002290558.1\|2287259_2288792_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.56109e-170
NZ_CP039729.1\|WP_002294579.1\|2298399_2298570_-\|preprotein-translocase-subunit-SecE	gnl\|CDD\|376355	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex. SecE is part of the SecYEG complex in bacteria which translocates proteins from the cytoplasm. In eukaryotes the complex, made from Sec61-gamma and Sec61-alpha translocates protein from the cytoplasm to the ER. Archaea have a similar complex.	1.48e-13
NZ_CP039729.1\|WP_002287788.1\|2285357_2286071_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	6.15701e-49
NZ_CP039729.1\|WP_002294587.1\|2292395_2293085_-\|50S-ribosomal-protein-L1	gnl\|CDD\|180071	PRK05424, rplA, 50S ribosomal protein L1; Validated.	1.66496e-146
NZ_CP039729.1\|WP_002294584.1\|2294634_2295507_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	2.63238e-103
NZ_CP039729.1\|WP_002294588.1\|2291061_2291430_-\|50S-ribosomal-protein-L7/L12	gnl\|CDD\|234671	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed.	5.30333e-45
NZ_CP039729.1\|WP_002303469.1\|2280646_2282806_+\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|180921	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP039729.1\|WP_002294589.1\|2290266_2290956_-\|TVP38/TMEM64-family-protein	gnl\|CDD\|223475	COG0398, COG0398, Uncharacterized conserved protein [Function unknown].	3.65546e-19
NZ_CP039729.1\|WP_002303471.1\|2288982_2290185_-\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.7222e-69
NZ_CP039729.1\|WP_002287787.1\|2286324_2287026_-\|glucosamine-6-phosphate-deaminase	gnl\|CDD\|238693	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.	8.8122e-119
NZ_CP039729.1\|WP_002294593.1\|2283909_2285049_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	2.46227e-61
NZ_CP039729.1\|WP_002291634.1\|2291482_2291986_-\|50S-ribosomal-protein-L10	gnl\|CDD\|234632	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed.	3.03735e-67

>NZ_CP039729.1|WP_002291634.1|2291482_2291986_-|50S-ribosomal-protein-L10
MSEAIIAKKAAIVDEVSEKFTAAASVVVVDYRGLTVDEVTRLRKQLRDANVEMKVIKNSILSRAAKKAGLEGMDEVFTGPTAVAFSNEDVVAPAKIMDEFAKEAKALEIKGGIIEGKVSSLEEITALAKLPNREGLLSMLLSVLQAPVRNVAYAVKAVADKEDGDAA
>NZ_CP039729.1|WP_002294588.1|2291061_2291430_-|50S-ribosomal-protein-L7/L12
MALNIENIVAELKEATILELNDLVKAIEEEFGVSAAAPVAVAAAGGAAAAEEQTEFTVELTAAGDQKVKVIKAVREATGLGLKEAKAVVDGAPAPVKEGVSKEEAEELKAKLEEVGASVTVK
>NZ_CP039729.1|WP_002294589.1|2290266_2290956_-|TVP38/TMEM64-family-protein
MKKKIIRLILISLGIILILVVGYRLYLEYQTDIQLFLNPRASKAELLAHIRSHGTFASILLIVLTAVMCAVPGIPTSVVGVIAGLSFGPLTGAIINILGNALGNITAIFLMHRLKFLDKKTETNHWVQAIRQMKHPKIGVMLGYMIPVIPSSMVNFAADAMKLPLQQIILSIVIGVIPSSVLYACGGEALFHGYNKTAVTLVASVTVLVGLVVFIYKDRKKKQGKQKHK
>NZ_CP039729.1|WP_002303471.1|2288982_2290185_-|MFS-transporter
MKSNEKKPLTTSLILLLSITCGVVVANMYYIQPIGTKVAASLSVSTSAVGILTMLTQLGYALGLLFLVPLGDVVDRPKLIIRMAALSAVSLLAAFFAPSFTLFACASFLIGLLSIVPQIIIPYGAVLAGPKARGKVMGTLLSGLLVGILLSRTVSGIVASLFSWRMIYLFALCAVGILTLLLYWKMPRSVQQSSTAVSYLDSLKSLPHLVASQRLLREAAVSGFFMFGTFSIFWSTLIFYISSPAYNWGTFEAGILAIFGLSGAVAAPIVGRLADSYSERKIVYMGLVMQTISFIALLVGGSHLAILLLAIILLDVGNQFGQVANQTRVQGLGEAASNRNNTVFMFMYFIGGAAGSLLGTTMWQQYGWLGVTVSGLVFQGCAFFFQTVVFKGKRNLENKK
>NZ_CP039729.1|WP_002290558.1|2287259_2288792_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILTLNNITQQFGDKILYEGVDLQLNAGEHLGLIGQNGAGKSTLIKIITGEILPDDGQIHWQKNIHKGYLDQYVEVDETLTIEEFLKTAYAKEYEKEEKIAFLYQTYSETFDDSLLEKAGKLQTELDQGVFYQIDTLVAEMSSGLGIDVLGLDSLLKNLSGGQRSKVILAKLLLENPDVLILDEPTNHLDDQHIQWLTQFLQDFDGAYIVISHDQEFLDQITTHIADIEFGKITKYTGHLKQALKQKEQNRESYLRQYHAQQKQIEKTEAYIRKYKAGSRSTMAKSRQKQLDKIERLTPPASASKAVFDFPFSPIVTTLAVETTDLVIGYDRPLLAPINLTIRFGENIAIRGFNGIGKSTLLKTLIGEIEKISGDFHFPDNTKINYFSQDLYWENPLETPLQYLSSQFPKATIKELRRQLAKAGLVNQLASEPLTTLSGGEQTKVKLAQLTMNQGNLLILDEPTNHIDQETKESLQDGIQKFPGTVIIVSHEQEFYQDLVQRVIEIEPK
>NZ_CP039729.1|WP_002287787.1|2286324_2287026_-|glucosamine-6-phosphate-deaminase
MEIIRVKNAEEGGKKAFEIIKEGMNKGAKVLGLATGSTPVTLYKEMTSSDLDFSEMTSVNLDEYVGLGGSDEQSYRHFMDVQLFDKKPFKETFVPDGKAEDLEAACKKYDQIIDAHPIDIQILGIGQNGHIGFNEPGASFDGTTSVVDLTESTINANKRFFDKAEDVPTKAVSMGIGSIMKSKEIVLMAFGESKADAIKGMIEGPVTNHLPASVLQNHDNVVVIIDEEAASKL
>NZ_CP039729.1|WP_002287788.1|2285357_2286071_-|MgtC/SapB-family-protein
MNDMVLTIPEIILRLGIAMLFGGAIGFERQYKNRPAGMRTHILVCMGACIIALIQVEIASGALRDALEYPQLAGTIRSDEARLIAQVVSGVGFLGAGTIIVTKQSVTGLTTAASLWAIAGLGIAIGMGYYSIAIISFIGIAIALTVVKRVIHVPTTKKLEIQFIHRKETKDFLTDYFEEKNIVIEDVNFDVKFVDDYRVYKNIYTIDLPKGLTYADVIEELSVHKNITKLHLVSIAQ
>NZ_CP039729.1|WP_002294593.1|2283909_2285049_-|AI-2E-family-transporter
MQSRFKQSKLFFWTVELVLTIIGVYFILQMPNIFSPILKMLSAVFLPLLVAGFIYYMFDPIVVFLEKHRIPRVFGFLLTFLVVIILVVLTVMNVVPQLMEQTIQLTQSLPMYADETSKWLNELAQREEFKNFNLEEQLASANLSLSNLFNIILVSLSASVSKIISFMMQFFILLFTVPFILLFMFKDGHKFIDALSHFFPKAIRKELRQTVKELNETLSAYISSTILDALIIGVMSFLAMRIFDQPYSLLLAVICGITNIIPYVGPFIGAVPAIIVGLFISPFQALYMALSILVIQQLDGNLIKPLLFGKSMNIHPLTIILVLIGAGSVAGILGMLICIPVYAVIKTIILNIRKIYLLRRMEHVSEKLDSPKVLEETSE
>NZ_CP039729.1|WP_002287792.1|2282855_2283821_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MSETYYEAINWNEIEDIIDKSTWEKLTEQFWLDTRIPLSNDLDDWRTLSQLEKDTVGHVFGGLTLLDTVQSESGMDQLRKDVRTPHEEAVLNNIQFMESVHAKSYSSIFSTLNTKKEIEEIFDWTNTNPYLQKKAERINEIYKHGTPLEKKIASVFLETFLFYSGFYTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLGFNELPEAEQETLKDWMYNLLYELYENEERYTEELYDPIGWTEEVKTFLRYNANKALMNLGMDPLFPDTANDVNPIVMNGISTGTSNHDFFSQVGNGYLLGHVEAMKDDDYLIGLE
>NZ_CP039729.1|WP_002303469.1|2280646_2282806_+|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MSLKNLQDVSYFKLNNEINRPVNGQIPLNKDKEALVAFFEENVKPNTMTFLSIMEKINYLIDQEYIEAEFIQLYSPSFIEKLYQFLDEQHFSFKSFMAAYKFYSQYALKTNDGSAYLETYEDRVAFNALYFANGDEELALALADEMIHQRYQPATPSFLNAGRKRRGELVSCFLTQVTDDMNSIGRSINSALQLSRIGGGVGITLSNLREAGAPIKGYEGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLNVFHPDIIAFLSAKKENADEKIRVKTLSLGVIVPDKFYELTRKNEDMYLFSPYSVEKEYGVPFSYVNITAEYDHLVANPNIRKQKIKARDLENEISKLQQESGYPYVINIDTANRENPIDGKIIMSNLCSEILQVQTPSVINGKQEYEVLGTDISCNLGSTNIVNLMQSPNFGQSVRTMTRALTFITDASDIDVVPPIQNGNKLNHTIGLGAMGLHTYLAKEQMEYGSEDSLDFTNIYFMLLNYWTLVESNNIARERKQVFHNFEKSAYADGTYFEKYVTGEFQPKSEKVKALFEGIFIPTAEDWNALKQAVMKDGLYHQNRLAVAPNGSISYINDTSASIHPITRMIEERQEKKIGKIYYPAPYLSNETIPYYTSAYDMDMRKVIDVYAMAQQHVDQGMSLTLFMRSEIPEGIYEWKTTTKQTTRDLNILRHYAFHKGIKSIYYVRTFTDDAEEIGSNQCESCVI
>NZ_CP039729.1|WP_002294587.1|2292395_2293085_-|50S-ribosomal-protein-L1
MAKKSKKMQDALKKVDSSKVYPVAEAVALAKETNIAKFDATVEVAYRLNVDPKKADQQIRGAVVLPNGTGKTQTVLVFAKGDKAKEAEAAGADFVGDDDMVQKIQNGWFDFDVVVATPDMMATVGRLGRVLGPKGLMPNPKTGTVTMDVTKAVNEVKAGKVTYRVDKAGNIHVPIGKVSFDDEKLVENFAAIHDVLLKAKPSAAKGQYMKNVTITTTFGPGIHVDQASF
>NZ_CP039729.1|WP_002291638.1|2293188_2293611_-|50S-ribosomal-protein-L11
MAKKVEKIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGLIIPVVISVYEDRSFTFVTKTPPAAVLLKKAAKIEKGSGEPNKNKVAKVSSDQVREIAELKMEDLNAANVEAAMRMVEGTARSMGITVE
>NZ_CP039729.1|WP_002294585.1|2293953_2294622_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKDLRYRSVFDIIGPVMIGPSSSHTAGAARIGKIIRSIFGEQPDSVDIYLYESFAKTYRGHGTDIALVGGLLGMEPDDERLADSLKLAYEAGMEVLFVPKSEKAEHPNSVKMLLKKGTRKLSVTGISIGGGNIQISELNGFKISLSMGTPTLIVVHQDVPGMIAKVTSILSETNTNIGTMTVTRESKGENAIMIIEVDDPQVEETVKRLKQLPNIDSVNYFD
>NZ_CP039729.1|WP_002294584.1|2294634_2295507_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFLSIEELVDQAKAYPSVAELMIAVEMEMSGRSRSHIIEIMEKNLSVMEQSINEGKEGVTSVTGITGGDAKKLDDYLNEADFLSGETILKAVRNAVAVNEVNAKMGLICATPTAGSAGVVPGVLMAVRDRLDLTHEQQLEFLFTAGAFGLVIANNASISGAEGGCQAEVGSASAMAAAALVCAKNGTPHQAAQAVAITLKNMMGLICDPVAGLVEVPCVKRNALGSSQAFISADMALAGIESVIPPDEVVAAMYQVGRQMPSIFKETAEGGLAVTPTAKRLAEEILNKRA
>NZ_CP039729.1|WP_002294583.1|2295597_2296617_-|L-lactate-oxidase
MEAGAFGYIRGGSEDEWTMKENTTSFNTKKIMPRILRGIDSADLHTSVFGIELDTPIIQAPSAAQGLAHEKGEADTAKGVAAAGSIFSISTYANTTIKDAADAAPGAPQFFQLYMSKDDRFNEFILNKAVEAGAKAIILTADSTLGGYREEDVINQFQFPLPMPNLAAYSEQSASGNGEGKGIAEIYAAAKQGLTPDDIKTIKEITHLPVIVKGIQSPEDAVIAISAGADGIWVSNHGGRQLDGGPASFEVLPKIAEVVNKRVPVIFDSGVRRGEHVFKALASGADLVAIGRPVIYGLNLGGAEGVTSVFEHLNKELSITMQLAGTKTIDEVKNTKLMD
>NZ_CP039729.1|WP_002294581.1|2296789_2297677_-|alpha/beta-fold-hydrolase
MTEPIKNLCKRATAAALVLISLFALSGCQTTKINTTEVSDKEKTAESSKVIEKTTIPTLFFHGYSGTENSFKGMLRRLEKNQQAVKELVLTVGTDGQIQATGDLSGKADNPMVQVLFEDNKNNEWNQAEWIKTCLLYLKENYGIDKVNIVGHSMGGVSALRYLGTYGQDTSLPQVQTLTAIGAPFNDFVDDSAQSLTDELAKGPAVVSNRYQDYQQMIGNIPITTRFFLIAGQLDETDLSDGTVPLNSALAVYALLKQRGNEIEEKVVTGENASHSMLHENQEVDQLVSRFIWKE
>NZ_CP039729.1|WP_002294580.1|2297753_2298299_-|transcription-termination/antitermination-protein-NusG
MESFEKNWYVLHTYSGYENKVKANIESRAQSMKMADFIFRVVVPEEKETEVKNGKEKEIVHKTFPGYVLVEMIMTDASWYVVRNTPGVTGFVGSHGAGSKPAPLLPEEVNHILRSIGMSLRQNDLEVEVGEVVKIIEGAFAGLEGQVTEVDGEKEKLKVNIDMFGRETSTELDFDQVDKID
>NZ_CP039729.1|WP_002294579.1|2298399_2298570_-|preprotein-translocase-subunit-SecE
MKFLKSVKDEIKQVTWPSRKQLRKDTLVVIETSIIFGLMFYVMDTAIQSLFGWILK
>NZ_CP039729.1|WP_002294578.1|2298593_2298746_-|50S-ribosomal-protein-L33
MAKKKAALACSVCGSRNYTKSVSEGKSGERLEINKFCKYCNQYTLHKETK
>NZ_CP039729.1|WP_002294577.1|2298907_2299552_+|CBS-domain-containing-protein
MLLKTLVYKKKDLTTVTETSTLEEALKILETSGYRCVPILDSSGNIFRGNIYKMHIYRHKANGGDMTLPVTHLLKNATKFIYLDTSFFKVFFTIKELPYIAVLDSENHFYGILTHSTLLNMLSQSWSVEQGSYVLTIASTGKQGDLAAIAKIISKHSSIASCITLDIEKDEYIRRTLITLPANTEAKVCETIVNHLEKKNYKVVEIENLQNQEA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

207141 : 272533

uncultured_Mediterranean_phage(18.18%)

transposase,holin,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002294192.1\|207141_208317_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.0e-17	32.9
WP_002296565.1\|208509_209541_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002289743.1\|210159_212799_+	cation-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	1.6e-84	31.2
WP_002296566.1\|212966_213665_-	DUF975 family protein	NA	NA	NA	NA
WP_002294183.1\|213882_215028_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.5e-82	40.9
WP_002294182.1\|215124_215505_+	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_002296567.1\|215809_218407_+	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_002288261.1\|218635_219742_+	glycosyl hydrolase	NA	NA	NA	NA
WP_002288260.1\|219758_220787_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA
WP_002288258.1\|220792_221272_+	TRAP transporter small permease	NA	NA	NA	NA
WP_002288256.1\|221287_222583_+	TRAP transporter large permease	NA	NA	NA	NA
WP_002288254.1\|222593_223418_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_002288252.1\|223582_224482_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_002288251.1\|224607_225477_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_002288250.1\|225629_227090_+	rhamnulokinase	NA	NA	NA	NA
WP_002288249.1\|227086_228343_+	L-rhamnose isomerase	NA	NA	NA	NA
WP_002288248.1\|228356_229202_+	rhamnulose-1-phosphate aldolase	NA	NA	NA	NA
WP_002288247.1\|229203_229515_+	L-rhamnose mutarotase	NA	NA	NA	NA
WP_002297404.1\|229719_230970_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002288246.1\|231379_232531_+	lactaldehyde reductase	NA	NA	NA	NA
WP_002294170.1\|232657_233416_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_002288242.1\|233515_234160_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_002288240.1\|234166_235174_+	sugar kinase	NA	NA	NA	NA
WP_002288239.1\|235189_236032_+	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA
WP_002294167.1\|236051_236855_+	gluconate 5-dehydrogenase	NA	NA	NA	NA
WP_002288234.1\|237103_238168_-	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA
WP_162166402.1\|238164_239250_-	phosphomevalonate kinase	NA	NA	NA	NA
WP_002288232.1\|239262_240240_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA
WP_002288231.1\|240232_241177_-	mevalonate kinase	NA	NA	NA	NA
WP_002322895.1\|241498_242152_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	1.1e-58	52.3
WP_002294163.1\|242236_243142_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_002294161.1\|243143_243776_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_002293357.1\|244095_244620_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.4e-14	33.3
WP_002289309.1\|244691_244892_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_002289310.1\|244944_245304_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_002289312.1\|245555_246893_+	hypothetical protein	NA	NA	NA	NA
WP_002289314.1\|246940_249070_+	hydantoinase	NA	NA	NA	NA
WP_002289315.1\|249044_249734_+	hypothetical protein	NA	NA	NA	NA
WP_002315615.1\|250967_251162_-	hypothetical protein	NA	NA	NA	NA
WP_002289317.1\|251211_251652_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_002289318.1\|251655_252501_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_002294157.1\|252649_254068_+	dipeptidase PepV	NA	NA	NA	NA
WP_138820985.1\|254124_255072_-	glycosyltransferase	NA	NA	NA	NA
WP_002289862.1\|255294_255645_-	peptidase	NA	NA	NA	NA
WP_002294156.1\|255844_256924_+	glutamyl aminopeptidase	NA	NA	NA	NA
WP_002287837.1\|257067_257388_+	thioredoxin family protein	NA	NA	NA	NA
WP_002287838.1\|257409_257874_+	universal stress protein	NA	NA	NA	NA
WP_002294153.1\|258078_258684_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_002302440.1\|258903_260205_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	1.6e-48	33.6
WP_002297218.1\|260343_261639_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002294152.1\|261745_263035_-	PDZ domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	5.7e-22	30.2
WP_002287841.1\|263462_263942_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
WP_002296569.1\|264026_264536_+	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	2.8e-17	34.8
WP_002296570.1\|264635_265286_+	hypothetical protein	NA	NA	NA	NA
WP_002291914.1\|265736_266675_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_002291912.1\|266687_267740_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002297185.1\|268040_269336_-\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	21.4
WP_002296392.1\|269527_270163_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_002296391.1\|270353_271145_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002295743.1\|271624_272533_+\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

277362 : 335712

Staphylococcus_phage(33.33%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000222572.1\|277362_278316_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002294735.1\|278414_279131_+	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_002296623.1\|279329_280625_+\|transposase	ISL3 family transposase	A0A1S5SBP9	Streptococcus_phage	3.9e-55	37.5
WP_025478783.1\|280671_282720_-	sulfatase-like hydrolase/transferase	NA	NA	NA	NA
WP_002294732.1\|283929_285171_+	serine/threonine transporter SstT	NA	NA	NA	NA
WP_002294730.1\|285317_285953_+	DUF998 domain-containing protein	NA	NA	NA	NA
WP_002294728.1\|286143_286884_+\|tRNA	tRNA pseudouridine(38-40) synthase TruA	NA	NA	NA	NA
WP_065305737.1\|287176_288349_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.7e-121	88.8
WP_002321965.1\|289963_290485_+	hypothetical protein	NA	NA	NA	NA
WP_000997695.1\|290523_291702_-\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002287592.1\|291771_293178_+	membrane protein	NA	NA	NA	NA
WP_002287590.1\|293164_294799_+	membrane protein	NA	NA	NA	NA
WP_002323245.1\|294900_296073_-\|transposase	IS256-like element IS1542 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-121	88.8
WP_002287588.1\|296305_297139_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA
WP_002287587.1\|297218_298208_+	glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA
WP_002287585.1\|298496_299195_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_002287584.1\|299344_300661_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002287583.1\|300677_302093_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_002287582.1\|302556_302877_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002287579.1\|302902_303220_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_002287577.1\|303248_304502_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002287575.1\|304632_305097_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002287574.1\|305125_305446_-	hypothetical protein	NA	NA	NA	NA
WP_002287572.1\|305476_306610_-	alcohol dehydrogenase catalytic domain-containing protein	E3SJ82	Synechococcus_phage	2.5e-13	24.8
WP_147581529.1\|306987_307179_-	hypothetical protein	NA	NA	NA	NA
WP_138820989.1\|307383_309078_-	oleate hydratase	NA	NA	NA	NA
WP_002287569.1\|309134_309263_-	hypothetical protein	NA	NA	NA	NA
WP_002321251.1\|309261_309510_+	hypothetical protein	NA	NA	NA	NA
WP_002287567.1\|309701_310067_+	DUF1622 domain-containing protein	NA	NA	NA	NA
WP_002287564.1\|310063_310429_+	DUF1622 domain-containing protein	NA	NA	NA	NA
WP_002287562.1\|310520_311948_-	hypothetical protein	NA	NA	NA	NA
WP_002287561.1\|312417_314253_+	tyrosine decarboxylase	NA	NA	NA	NA
WP_002287560.1\|314557_316036_+	amino acid permease	NA	NA	NA	NA
WP_002287558.1\|316001_317333_+	amino acid permease	NA	NA	NA	NA
WP_002287556.1\|317446_319999_+	HAD-IC family P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	3.6e-68	29.7
WP_002287554.1\|320005_321445_-	HTH domain-containing protein	NA	NA	NA	NA
WP_002287552.1\|321790_322153_+	hypothetical protein	NA	NA	NA	NA
WP_002287551.1\|322339_323197_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002287550.1\|323316_324228_+	ACP S-malonyltransferase	NA	NA	NA	NA
WP_002287549.1\|324234_325881_+	malonate decarboxylase subunit alpha	NA	NA	NA	NA
WP_002287548.1\|325982_326282_+	malonate decarboxylase subunit delta	NA	NA	NA	NA
WP_002287546.1\|326271_327948_+	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA
WP_002287544.1\|327951_328545_+	malonate decarboxylase holo-ACP synthase	NA	NA	NA	NA
WP_002287542.1\|328568_329645_+	acyltransferase	NA	NA	NA	NA
WP_002287541.1\|329669_330539_+	triphosphoribosyl-dephospho-CoA synthase MdcB	NA	NA	NA	NA
WP_002287538.1\|330649_331414_+	TIM44-like domain-containing protein	NA	NA	NA	NA
WP_002287536.1\|331902_333996_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_002287534.1\|334020_334323_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_086953915.1\|334372_335712_-\|transposase	IS3-like element ISEnfa3 family transposase	A0A1B1P773	Bacillus_phage	2.6e-78	52.7

DBSCAN-SWA_3

565894 : 630545

Streptococcus_phage(19.05%)

transposase,integrase

attL 565813:565872|attR 630568:632081

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
565813:565872	attL	NA	NA	NA	NA
WP_002297218.1\|565894_567190_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002287679.1\|567501_568275_+	Fe-S cluster assembly ATPase SufC	A0A2R8FG22	Brazilian_cedratvirus	2.1e-08	28.8
WP_002287681.1\|568287_569574_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_002287683.1\|569570_570806_+	cysteine desulfurase	Q2XUY6	environmental_halophage	3.9e-113	47.7
WP_002287684.1\|570792_571263_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_002287686.1\|571267_572659_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_002287688.1\|572756_573899_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	4.6e-60	36.3
WP_002287690.1\|573949_574747_-	helix-turn-helix transcriptional regulator	Q9AZH9	Lactococcus_phage	2.6e-09	39.0
WP_002287692.1\|574948_575248_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002287693.1\|575512_576388_+	hypothetical protein	M4ZS60	Bacillus_phage	3.3e-13	37.8
WP_002321927.1\|576384_576603_+	hypothetical protein	NA	NA	NA	NA
WP_002287694.1\|576589_579217_+	hypothetical protein	NA	NA	NA	NA
WP_002297018.1\|579231_579450_+	hypothetical protein	NA	NA	NA	NA
WP_002329547.1\|580968_581283_+	hypothetical protein	NA	NA	NA	NA
WP_002287697.1\|581335_582109_-	hypothetical protein	NA	NA	NA	NA
WP_002287739.1\|582213_582459_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002287698.1\|582614_583466_+	hypothetical protein	NA	NA	NA	NA
WP_002287699.1\|583498_584935_+	hypothetical protein	A0A1S5SA14	Streptococcus_phage	2.5e-10	29.4
WP_002287700.1\|584936_585422_+	TIR domain-containing protein	NA	NA	NA	NA
WP_002287705.1\|586049_587192_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	3.3e-58	34.8
WP_002287709.1\|587230_587965_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002287723.1\|588196_588472_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002287725.1\|588569_590567_+	hypothetical protein	A0A1Z1LZK7	Bacillus_phage	5.2e-22	23.8
WP_002287726.1\|590642_590978_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002296546.1\|591106_591322_+	helix-turn-helix transcriptional regulator	A0A139ZPI6	Marinitoga_camini_virus	4.7e-06	41.8
WP_002287729.1\|591358_591724_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_002287730.1\|591760_592087_+	hypothetical protein	NA	NA	NA	NA
WP_002287731.1\|592240_592966_+	hypothetical protein	NA	NA	NA	NA
WP_002287732.1\|593475_595068_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	6.8e-126	50.9
WP_002287733.1\|595060_596305_+	restriction endonuclease subunit S	A0A2H4PQP5	Staphylococcus_phage	3.3e-19	26.9
WP_002287735.1\|596318_599468_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_074394723.1\|600185_601649_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	1.2e-121	47.3
WP_002288539.1\|602961_603627_-	helix-turn-helix domain-containing protein	A0A2I7SCV6	Paenibacillus_phage	1.1e-05	47.8
WP_002288541.1\|603752_605789_+	DUF1430 domain-containing protein	NA	NA	NA	NA
WP_002291166.1\|605792_606431_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	5.9e-12	28.8
WP_002288545.1\|606458_606887_+	hypothetical protein	NA	NA	NA	NA
WP_002288548.1\|607343_608255_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_002296840.1\|608415_609603_+\|transposase	IS256-like element IS16 family transposase	A0A0K2CZ57	Paenibacillus_phage	8.2e-92	46.3
WP_002321907.1\|609945_610383_+	hypothetical protein	NA	NA	NA	NA
WP_002288550.1\|610477_611362_+	diacylglycerol kinase family lipid kinase	NA	NA	NA	NA
WP_002296199.1\|611585_614753_+	hypothetical protein	NA	NA	NA	NA
WP_002288554.1\|614772_615318_+	DUF916 domain-containing protein	NA	NA	NA	NA
WP_002288556.1\|615345_615801_+	DUF3324 domain-containing protein	NA	NA	NA	NA
WP_002288559.1\|615797_616556_+	WxL domain-containing protein	NA	NA	NA	NA
WP_002288561.1\|616641_617382_-	response regulator transcription factor	NA	NA	NA	NA
WP_002296197.1\|617442_618696_+	GHKL domain-containing protein	NA	NA	NA	NA
WP_002293846.1\|619017_619245_+	transcriptional regulator	NA	NA	NA	NA
WP_002293844.1\|619367_619694_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_002296196.1\|619761_620475_+	class A sortase	NA	NA	NA	NA
WP_002291144.1\|620784_621636_+	PRD domain-containing protein	NA	NA	NA	NA
WP_002296194.1\|621756_623622_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_002293840.1\|623669_625079_+	family 1 glycosylhydrolase	A0A0B5JD41	Pandoravirus	6.6e-32	28.0
WP_002293839.1\|625186_625888_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002293608.1\|627373_627949_+	TIGR00730 family Rossman fold protein	A0A1D3SNB7	Enterococcus_phage	1.5e-35	44.9
WP_002293607.1\|627948_628389_+	nucleoside deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	8.9e-36	50.7
WP_002293834.1\|628404_629106_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	7.8e-50	48.6
WP_002297218.1\|629249_630545_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
630568:632081	attR	NA	NA	NA	NA

DBSCAN-SWA_4

741566 : 750038

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002294039.1\|741566_742211_+	dTMP kinase	M1PSC7	Streptococcus_phage	4.2e-58	52.6
WP_002292340.1\|742225_742555_+	hypothetical protein	NA	NA	NA	NA
WP_002288071.1\|742568_743507_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	3.3e-35	34.4
WP_002288073.1\|743542_744367_+	stage 0 sporulation family protein	NA	NA	NA	NA
WP_002288076.1\|744359_744707_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	5.1e-18	41.1
WP_002288078.1\|744775_745648_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.1e-88	60.4
WP_002294035.1\|745756_746878_+	DNA polymerase IV	NA	NA	NA	NA
WP_002288081.1\|746931_747534_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A288TZV3	Enterococcus_phage	1.7e-53	58.6
WP_002288083.1\|747848_750038_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	1.8e-286	66.6

DBSCAN-SWA_5

917634 : 989303

Staphylococcus_phage(27.27%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002287651.1\|917634_919575_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	3.3e-114	35.2
WP_002287653.1\|919798_920647_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002302928.1\|921041_923195_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_002297218.1\|923555_924851_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002296740.1\|925029_925839_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002295362.1\|926131_927568_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	3.8e-43	29.0
WP_002290958.1\|927737_928934_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_002295359.1\|928995_929181_-	YjzD family protein	NA	NA	NA	NA
WP_002303521.1\|929411_932726_+	DNA polymerase III subunit alpha	R4TB75	Streptomyces_phage	1.8e-149	33.0
WP_002304759.1\|932893_933856_+	6-phosphofructokinase	NA	NA	NA	NA
WP_002295355.1\|933929_935714_+	pyruvate kinase	NA	NA	NA	NA
WP_002295354.1\|935748_936651_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002295352.1\|936836_937406_+	DUF177 domain-containing protein	NA	NA	NA	NA
WP_002290970.1\|937463_937643_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_002298263.1\|937812_939234_+	NADP-dependent phosphogluconate dehydrogenase	A0A1D8KPW3	Synechococcus_phage	4.2e-34	31.1
WP_002290973.1\|939426_940113_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.8e-28	31.2
WP_002298265.1\|940109_941615_+	HAMP domain-containing histidine kinase	Q8QNA2	Ectocarpus_siliculosus_virus	3.9e-06	25.1
WP_002317647.1\|949113_949989_+	PRD domain-containing protein	NA	NA	NA	NA
WP_002288811.1\|950092_950857_+	carbohydrate deacetylase	NA	NA	NA	NA
WP_045136023.1\|950873_952286_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_002288815.1\|953639_954098_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_045136022.1\|954389_955691_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002295336.1\|955717_955978_+	diacylglycerol kinase	NA	NA	NA	NA
WP_002288819.1\|956976_958212_-	glycosyl transferase	NA	NA	NA	NA
WP_002288821.1\|958778_959606_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002288823.1\|959878_960649_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_045136021.1\|960866_961934_+	L-ascorbate 6-phosphate lactonase	NA	NA	NA	NA
WP_010728432.1\|961951_962413_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_002324626.1\|962432_963917_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_045136020.1\|963959_964259_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002288832.1\|964273_964912_+	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_002289048.1\|964916_965777_+	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_002295327.1\|965766_966477_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_002289050.1\|966708_967143_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002289065.1\|967239_967539_-	hypothetical protein	NA	NA	NA	NA
WP_002289063.1\|967807_968002_-	hypothetical protein	NA	NA	NA	NA
WP_002323245.1\|968260_969433_+\|transposase	IS256-like element IS1542 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-121	88.8
WP_002295324.1\|969561_970323_-	formate/nitrite transporter family protein	NA	NA	NA	NA
WP_002323245.1\|970745_971918_+\|transposase	IS256-like element IS1542 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-121	88.8
WP_000997695.1\|973256_974435_-\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002297404.1\|975328_976579_-\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002288285.1\|976988_977288_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_044383392.1\|977360_978722_+	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_002288318.1\|978743_979004_+	hypothetical protein	NA	NA	NA	NA
WP_002288278.1\|979017_979770_+	aldolase	NA	NA	NA	NA
WP_002294361.1\|979863_980469_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_002297941.1\|980524_981499_-	ring-cleaving dioxygenase	NA	NA	NA	NA
WP_077940815.1\|981876_982656_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002294365.1\|982722_983994_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA
WP_002297943.1\|984146_985544_+	glycoside hydrolase family 1 protein	NA	NA	NA	NA
WP_002289467.1\|985624_986065_+	universal stress protein	NA	NA	NA	NA
WP_002289468.1\|986211_986538_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_002289470.1\|986538_987288_+	hypothetical protein	NA	NA	NA	NA
WP_002302217.1\|987313_987724_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_002323245.1\|988130_989303_-\|transposase	IS256-like element IS1542 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-121	88.8

DBSCAN-SWA_6

1130533 : 1139594

Gordonia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002288023.1\|1130533_1131829_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	4.5e-19	33.1
WP_002297115.1\|1132008_1132386_-	hypothetical protein	NA	NA	NA	NA
WP_002288021.1\|1132641_1133370_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	E3SPA9	Prochlorococcus_phage	4.6e-45	41.4
WP_002295474.1\|1133369_1133624_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_002302316.1\|1133625_1134297_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_002299012.1\|1134297_1136520_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-150	41.4
WP_002299010.1\|1136504_1137944_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.4e-53	32.9
WP_002299008.1\|1137975_1139019_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	2.7e-62	43.7
WP_002302314.1\|1139015_1139594_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.0e-28	39.4

DBSCAN-SWA_7

1409795 : 1454455

Streptococcus_phage(21.43%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002287525.1\|1409795_1410944_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
WP_002287522.1\|1410960_1411365_-\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.3e-52	73.8
WP_002295138.1\|1412481_1412955_+	DUF2975 domain-containing protein	NA	NA	NA	NA
WP_002295139.1\|1412963_1413191_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002295142.1\|1413826_1414198_+	hypothetical protein	NA	NA	NA	NA
WP_002297218.1\|1414376_1415672_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002291278.1\|1415975_1416218_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_002296679.1\|1416249_1417152_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_002291274.1\|1417164_1417353_-	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_002296677.1\|1417366_1417930_-	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_002300977.1\|1417967_1418861_-	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	5.2e-59	46.0
WP_002296674.1\|1418938_1419877_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_002296672.1\|1419910_1420261_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_002296671.1\|1420293_1421196_-	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_002296670.1\|1421188_1422046_-	glycosyltransferase family 8 protein	A0ZYL4	Archaeal_BJ1_virus	1.3e-19	27.1
WP_002296669.1\|1422379_1423189_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002296667.1\|1423228_1423726_+	cysteine hydrolase	NA	NA	NA	NA
WP_002321681.1\|1424370_1424694_+	hypothetical protein	NA	NA	NA	NA
WP_002296665.1\|1424857_1425112_+	hypothetical protein	NA	NA	NA	NA
WP_002296663.1\|1425181_1425427_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002296662.1\|1425502_1425868_+	hypothetical protein	NA	NA	NA	NA
WP_002303842.1\|1425928_1426492_-	hypothetical protein	NA	NA	NA	NA
WP_002297218.1\|1427143_1428439_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002293303.1\|1428751_1428952_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.9e-23	77.3
WP_002296656.1\|1429703_1430417_-	HAD family phosphatase	A0A1D8KPI1	Synechococcus_phage	5.4e-06	23.0
WP_002296654.1\|1430409_1431495_-	mannonate dehydratase	NA	NA	NA	NA
WP_002296653.1\|1431511_1431955_-	PTS fructose transporter subunit IIA	NA	NA	NA	NA
WP_002321678.1\|1431988_1432342_-	hypothetical protein	NA	NA	NA	NA
WP_002296650.1\|1432453_1432855_-	hypothetical protein	NA	NA	NA	NA
WP_002296648.1\|1432891_1433401_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002303107.1\|1433422_1434280_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_002297404.1\|1434689_1435940_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3
WP_002296646.1\|1436080_1436914_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002303106.1\|1436927_1437725_-	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_002321677.1\|1437757_1438042_-	alcohol dehydrogenase	NA	NA	NA	NA
WP_002296641.1\|1438038_1439040_-	2-hydroxyacid dehydrogenase	M1H9J0	Paramecium_bursaria_Chlorella_virus	2.8e-24	29.0
WP_102993993.1\|1439041_1439944_-	decarboxylating 6-phosphogluconate dehydrogenase	A0A1D8KGX1	Synechococcus_phage	1.8e-51	35.0
WP_002296639.1\|1440107_1440956_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_002296638.1\|1441601_1441808_+	DUF3955 domain-containing protein	NA	NA	NA	NA
WP_002296637.1\|1442009_1443011_-	alpha/beta hydrolase	M1PGN2	Moumouvirus	2.5e-09	31.8
WP_002311095.1\|1443015_1444929_-	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_002296634.1\|1445096_1445603_-	cysteine hydrolase	NA	NA	NA	NA
WP_002296633.1\|1445762_1446203_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_002296632.1\|1446228_1447386_-	hypothetical protein	NA	NA	NA	NA
WP_002296631.1\|1447388_1447745_-	hypothetical protein	NA	NA	NA	NA
WP_002296629.1\|1448042_1449017_-	LPXTG-anchored fibrinogen/nidogen-binding adhesin SgrA	NA	NA	NA	NA
WP_105459812.1\|1450237_1451125_+	rotamase	NA	NA	NA	NA
WP_002311093.1\|1451718_1452414_-	fructose-6-phosphate aldolase	E3SKN5	Synechococcus_phage	1.0e-22	31.5
WP_002296624.1\|1452397_1452796_-	PTS glucitol/sorbitol transporter subunit IIA	NA	NA	NA	NA
WP_002297404.1\|1453204_1454455_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3

DBSCAN-SWA_8

1704577 : 1766613

Streptococcus_phage(26.67%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297218.1\|1704577_1705873_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002293930.1\|1706252_1706465_-	hypothetical protein	NA	NA	NA	NA
WP_065305737.1\|1707336_1708509_-\|transposase	IS256 family transposase	A0A0N9STL0	Staphylococcus_phage	1.7e-121	88.8
WP_002325786.1\|1708675_1709062_+	YxeA family protein	NA	NA	NA	NA
WP_002288574.1\|1709369_1710716_-	glucose-6-phosphate isomerase	NA	NA	NA	NA
WP_002317577.1\|1710827_1712177_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_002288576.1\|1712293_1713547_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	7.7e-24	55.3
WP_002347404.1\|1713617_1714103_-\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_002326253.1\|1714125_1714884_-	type I 3-dehydroquinate dehydratase	W6LP76	Streptococcus_phage	6.5e-26	36.9
WP_002322842.1\|1714899_1716078_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	5.1e-102	48.9
WP_002326254.1\|1716307_1718428_+	LTA synthase family protein	W6LM83	Streptococcus_phage	6.3e-220	58.3
WP_002326255.1\|1718650_1719376_+	hypothetical protein	NA	NA	NA	NA
WP_002288586.1\|1719365_1719875_+	hypothetical protein	NA	NA	NA	NA
WP_138821021.1\|1719944_1721393_-	HAMP domain-containing protein	A0A1V0SGX0	Hokovirus	1.3e-19	29.3
WP_002293942.1\|1721392_1722109_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.0e-33	35.7
WP_002288595.1\|1722089_1722440_-	SdpI family protein	NA	NA	NA	NA
WP_002288592.1\|1722583_1723357_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002323892.1\|1724327_1724642_-	hypothetical protein	NA	NA	NA	NA
WP_002324322.1\|1724746_1725925_+\|transposase	IS256-like element ISEfm2 family transposase	NA	NA	NA	NA
WP_002321266.1\|1726260_1726500_+	hypothetical protein	NA	NA	NA	NA
WP_002289617.1\|1726861_1727122_-	hypothetical protein	NA	NA	NA	NA
WP_002289618.1\|1727306_1727804_-	GAF domain-containing protein	NA	NA	NA	NA
WP_002323008.1\|1727933_1728644_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_002297645.1\|1728656_1730321_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_002297646.1\|1730526_1731189_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_002325788.1\|1731198_1732014_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002288989.1\|1732275_1732719_-	LysR family transcriptional regulator substrate-binding protein	NA	NA	NA	NA
WP_002321036.1\|1732852_1733191_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_002302962.1\|1733178_1733556_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_000997695.1\|1733718_1734897_-\|transposase	IS256-like element ISEf1 family transposase	NA	NA	NA	NA
WP_002322902.1\|1735125_1736319_+	MFS transporter	NA	NA	NA	NA
WP_002288984.1\|1736484_1736907_-	HTH domain-containing protein	NA	NA	NA	NA
WP_002303955.1\|1737496_1737952_+	hypothetical protein	NA	NA	NA	NA
WP_002288982.1\|1738113_1739286_-	class C sortase	NA	NA	NA	NA
WP_002303963.1\|1742416_1744744_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002288970.1\|1745586_1745880_-	DUF2087 domain-containing protein	NA	NA	NA	NA
WP_002286913.1\|1746137_1746485_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_002293717.1\|1746620_1747382_-\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_002346829.1\|1747371_1747893_-	ribosome maturation factor RimM	NA	NA	NA	NA
WP_002297190.1\|1748062_1748854_-	hypothetical protein	NA	NA	NA	NA
WP_002290277.1\|1748978_1749230_-	KH domain-containing protein	NA	NA	NA	NA
WP_002290274.1\|1749241_1749517_-	30S ribosomal protein S16	NA	NA	NA	NA
WP_002293714.1\|1749769_1750324_+	NAD(P)H-dependent oxidoreductase	A0A2P0ZL77	Lactobacillus_phage	2.3e-12	29.3
WP_002297192.1\|1750402_1750924_-	dihydrofolate reductase	NA	NA	NA	NA
WP_002293710.1\|1750927_1751506_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA
WP_002293709.1\|1751617_1753036_-	signal recognition particle protein	NA	NA	NA	NA
WP_002293708.1\|1753056_1753395_-	putative DNA-binding protein	NA	NA	NA	NA
WP_002297194.1\|1753354_1753858_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_002293705.1\|1753988_1754693_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.4e-38	36.2
WP_002322835.1\|1754689_1756426_+	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	9.3e-28	34.1
WP_002293701.1\|1756528_1759003_-	cation-translocating P-type ATPase	M1HBF8	Paramecium_bursaria_Chlorella_virus	1.7e-46	29.2
WP_002289807.1\|1759328_1760219_-	phosphate ABC transporter substrate-binding protein PstS family protein	NA	NA	NA	NA
WP_002293699.1\|1760415_1760898_-	hypothetical protein	NA	NA	NA	NA
WP_002289810.1\|1761105_1761471_+	hypothetical protein	NA	NA	NA	NA
WP_002322761.1\|1761561_1761879_-	hypothetical protein	NA	NA	NA	NA
WP_086956687.1\|1762244_1763406_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.6e-79	51.3
WP_002295271.1\|1763978_1764953_-	choloylglycine hydrolase family protein	M1HVK5	Paramecium_bursaria_Chlorella_virus	5.4e-25	31.8
WP_002297404.1\|1765362_1766613_+\|transposase	IS110 family transposase	M1NSC9	Streptococcus_phage	4.0e-113	63.3

DBSCAN-SWA_9

1979606 : 2088990

116

Enterococcus_phage(28.95%)

tail,transposase,holin,plate,portal,head,terminase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002303350.1\|1979606_1980566_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_002295061.1\|1980786_1981890_-	L-lactate oxidase	NA	NA	NA	NA
WP_002295059.1\|1982111_1982582_-	DUF4809 family protein	NA	NA	NA	NA
WP_000202380.1\|1982838_1984158_+\|transposase	IS1380-like element IS1678 family transposase	A0A1X9I6F6	Streptococcus_phage	4.8e-210	82.7
WP_002302982.1\|1984598_1986239_+	NAD-dependent malic enzyme	NA	NA	NA	NA
WP_002302984.1\|1986392_1987715_+	2-hydroxycarboxylate transporter family protein	NA	NA	NA	NA
WP_002295053.1\|1987776_1988208_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002302985.1\|1988271_1989108_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_002295049.1\|1989297_1989600_-	DUF1292 domain-containing protein	NA	NA	NA	NA
WP_002290886.1\|1989625_1990057_-	Holliday junction resolvase RuvX	NA	NA	NA	NA
WP_002290885.1\|1990053_1990320_-	IreB family regulatory phosphoprotein	NA	NA	NA	NA
WP_002290883.1\|1990573_1991299_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_002289867.1\|1991851_1992604_+	threonine/serine exporter family protein	NA	NA	NA	NA
WP_002289868.1\|1992619_1993099_+	threonine/serine exporter	NA	NA	NA	NA
WP_002296509.1\|1993349_1994930_-	ABC transporter	NA	NA	NA	NA
WP_002287741.1\|1994922_1995666_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.6e-29	30.9
WP_002287742.1\|1995841_1996618_-	response regulator transcription factor	NA	NA	NA	NA
WP_002287743.1\|1996865_1997702_-	TIGR03943 family protein	NA	NA	NA	NA
WP_002287744.1\|1997712_1998642_-	permease	NA	NA	NA	NA
WP_002287745.1\|1998833_1999187_+	thioredoxin family protein	NA	NA	NA	NA
WP_002287746.1\|1999260_1999917_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_002287747.1\|2000142_2002077_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.1e-58	31.9
WP_002321414.1\|2002162_2003386_-	glucuronyl hydrolase	NA	NA	NA	NA
WP_002321415.1\|2003379_2005278_-	DUF2264 domain-containing protein	NA	NA	NA	NA
WP_002287753.1\|2005271_2006390_-	glycosyl hydrolase family 88	NA	NA	NA	NA
WP_002302991.1\|2006472_2007306_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002287755.1\|2007298_2008216_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_002287757.1\|2008442_2009567_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_002296511.1\|2009749_2010658_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002323245.1\|2010806_2011979_+\|transposase	IS256-like element IS1542 family transposase	A0A0N9STL0	Staphylococcus_phage	1.3e-121	88.8
WP_002287759.1\|2012130_2013744_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000222572.1\|2014394_2015348_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_138821033.1\|2015381_2016611_-	GTPase HflX	NA	NA	NA	NA
WP_002289405.1\|2016612_2017530_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_002289404.1\|2017533_2018271_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	2.3e-12	40.0
WP_002289403.1\|2018361_2018889_-	hypothetical protein	NA	NA	NA	NA
WP_002289402.1\|2019068_2019662_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	8.9e-55	55.6
WP_002289401.1\|2019765_2020251_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_002296291.1\|2020403_2020601_-	hypothetical protein	NA	NA	NA	NA
WP_002289400.1\|2020695_2022456_-	multidrug efflux ABC transporter subunit EfrB	W8CYL7	Bacillus_phage	2.5e-52	28.6
WP_002296290.1\|2022452_2024183_-	multidrug efflux ABC transporter subunit EfrA	W8CYL7	Bacillus_phage	2.1e-43	27.6
WP_002287947.1\|2024575_2024788_+	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_002287948.1\|2024789_2026469_+	ribonuclease J	NA	NA	NA	NA
WP_002294067.1\|2026722_2026923_-	cold-shock protein	Q9AZD3	Lactococcus_phage	3.7e-21	71.2
WP_002347086.1\|2027998_2028397_-	hypothetical protein	NA	NA	NA	NA
WP_002305550.1\|2028389_2028842_-	hypothetical protein	NA	NA	NA	NA
WP_044384583.1\|2028828_2029236_-	hypothetical protein	NA	NA	NA	NA
WP_025477679.1\|2029214_2029517_+	hypothetical protein	NA	NA	NA	NA
WP_002302755.1\|2030511_2031720_-	hypothetical protein	NA	NA	NA	NA
WP_002302753.1\|2031834_2032845_-	N-acetylmuramoyl-L-alanine amidase	A0A1G5SA77	Enterococcus_phage	2.8e-61	66.1
WP_002349260.1\|2032841_2033231_-\|holin	phage holin family protein	F0PIJ6	Enterococcus_phage	9.0e-40	69.7
WP_002302750.1\|2033330_2033471_-	XkdX family protein	A0A2H4JD72	uncultured_Caudovirales_phage	1.1e-08	54.8
WP_002332774.1\|2033463_2033811_-	hypothetical protein	NA	NA	NA	NA
WP_002347378.1\|2033824_2034319_-	hypothetical protein	NA	NA	NA	NA
WP_002319918.1\|2034318_2034768_-	hypothetical protein	NA	NA	NA	NA
WP_002303306.1\|2034771_2035392_-	hypothetical protein	NA	NA	NA	NA
WP_002347082.1\|2035391_2036300_-\|plate	phage baseplate upper protein	A0A1P8BLW0	Lactococcus_phage	7.8e-10	25.2
WP_002347081.1\|2036312_2039075_-	CHAP domain-containing protein	Q9AZX5	Lactococcus_phage	6.0e-138	39.1
WP_002303299.1\|2039071_2039812_-\|tail	tail protein	NA	NA	NA	NA
WP_002305859.1\|2039801_2042591_-	tape measure protein	D7RWD8	Brochothrix_phage	8.4e-71	40.2
WP_002303297.1\|2042832_2043174_-	hypothetical protein	NA	NA	NA	NA
WP_002303295.1\|2043173_2043782_-\|tail	tail protein	NA	NA	NA	NA
WP_002298045.1\|2043782_2044160_-	hypothetical protein	NA	NA	NA	NA
WP_002298046.1\|2044161_2044557_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_002298048.1\|2044549_2044921_-	hypothetical protein	NA	NA	NA	NA
WP_002298050.1\|2044920_2045262_-	hypothetical protein	NA	NA	NA	NA
WP_002311614.1\|2045273_2045489_-	hypothetical protein	NA	NA	NA	NA
WP_002303293.1\|2045511_2046402_-	DUF5309 domain-containing protein	NA	NA	NA	NA
WP_002349163.1\|2046416_2047118_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_002298058.1\|2047166_2047484_-	hypothetical protein	NA	NA	NA	NA
WP_002298060.1\|2047485_2048364_-\|head	phage head morphogenesis protein	NA	NA	NA	NA
WP_002303292.1\|2048455_2049985_-\|portal	phage portal protein	A0A0S2MVB2	Bacillus_phage	1.3e-28	25.0
WP_002298064.1\|2049996_2051412_-	hypothetical protein	C9E2I7	Enterococcus_phage	1.0e-218	79.7
WP_002303291.1\|2051404_2052238_-\|terminase	small subunit of terminase	D2IYW0	Enterococcus_phage	1.5e-79	68.8
WP_002303289.1\|2052842_2053103_-	hypothetical protein	A0A0S2MYE7	Enterococcus_phage	7.9e-16	51.1
WP_002303288.1\|2054052_2054439_-	hypothetical protein	O34053	Streptococcus_phage	1.6e-28	53.5
WP_002303286.1\|2054451_2054865_-	autolysin	C9E2P5	Enterococcus_phage	5.6e-56	81.0
WP_002303285.1\|2054941_2055238_-	hypothetical protein	NA	NA	NA	NA
WP_002303283.1\|2055234_2055438_-	hypothetical protein	NA	NA	NA	NA
WP_002303282.1\|2055444_2055675_-	hypothetical protein	A0A0S2MYD2	Enterococcus_phage	1.6e-12	52.1
WP_002303281.1\|2055671_2056055_-	hypothetical protein	NA	NA	NA	NA
WP_002303280.1\|2056051_2056594_-	DUF1642 domain-containing protein	Q8W5X2	Listeria_phage	3.9e-17	40.7
WP_002303279.1\|2056590_2057061_-	hypothetical protein	A0A0A7RWK2	Clostridium_phage	9.6e-12	33.8
WP_002305847.1\|2057062_2057245_-	hypothetical protein	NA	NA	NA	NA
WP_002317474.1\|2057237_2057555_-	hypothetical protein	NA	NA	NA	NA
WP_002299339.1\|2057551_2058403_-	ATP-binding protein	A0A0P0I3L9	Lactobacillus_phage	2.3e-27	30.2
WP_002303278.1\|2058417_2059218_-	hypothetical protein	B4XYS6	Lactobacillus_phage	8.9e-58	54.5
WP_002303277.1\|2059260_2060151_-	hypothetical protein	D2IYT9	Enterococcus_phage	6.2e-137	84.5
WP_002303275.1\|2060152_2061094_-	endonuclease	D2IZK1	Enterococcus_phage	2.7e-146	78.9
WP_002303273.1\|2061326_2061662_-	hypothetical protein	NA	NA	NA	NA
WP_002299325.1\|2061928_2062153_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	2.2e-27	81.1
WP_002299038.1\|2062461_2062617_-	hypothetical protein	NA	NA	NA	NA
WP_002304464.1\|2062688_2062919_+	DUF2188 domain-containing protein	E8ZD70	Streptococcus_phage	4.4e-10	49.3
WP_002303266.1\|2063086_2063353_-	helix-turn-helix transcriptional regulator	A0A1W6JP54	Staphylococcus_phage	5.4e-12	52.7
WP_002303265.1\|2063552_2064257_+	LexA family transcriptional regulator	D7RWF2	Brochothrix_phage	6.2e-39	42.4
WP_002303264.1\|2064343_2065633_+	DUF4041 domain-containing protein	M1NRY5	Streptococcus_phage	5.6e-46	74.0
WP_002303263.1\|2065698_2067051_+	recombinase family protein	D2IZV7	Enterococcus_phage	1.7e-133	55.3
WP_002304462.1\|2066945_2067617_-	DNA repair protein RadC	NA	NA	NA	NA
WP_002287951.1\|2067671_2068325_-	HAD family phosphatase	NA	NA	NA	NA
WP_002294071.1\|2068314_2069628_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_002287953.1\|2069937_2072583_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	4.0e-163	42.9
WP_002287954.1\|2072975_2073623_-	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_002287955.1\|2074195_2075407_-\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_002287956.1\|2075422_2076565_-	cysteine desulfurase	NA	NA	NA	NA
WP_002287957.1\|2076729_2078451_-	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_002287958.1\|2078649_2079210_-	haloacid dehalogenase	A0A0H3UZF4	Geobacillus_virus	2.3e-28	45.1
WP_002287959.1\|2079235_2080075_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_002287960.1\|2080108_2080942_-	DUF72 domain-containing protein	NA	NA	NA	NA
WP_002287961.1\|2081173_2082142_+	asparaginase	NA	NA	NA	NA
WP_002287962.1\|2082296_2083034_-	acyl-ACP thioesterase	NA	NA	NA	NA
WP_138821035.1\|2083049_2083883_-	phosphotransferase	NA	NA	NA	NA
WP_002294080.1\|2084084_2085413_-	aminopeptidase C	R4TV59	Phaeocystis_globosa_virus	7.3e-73	38.1
WP_002294084.1\|2085905_2086055_-	hypothetical protein	NA	NA	NA	NA
WP_002287965.1\|2086502_2087132_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_002287966.1\|2087245_2087620_-	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA
WP_086956687.1\|2087828_2088990_+\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	1.6e-79	51.3

DBSCAN-SWA_10

2115407 : 2181483

Enterococcus_phage(17.65%)

transposase,tRNA,bacteriocin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002287132.1\|2115407_2115887_-\|tRNA	aminoacyl-tRNA deacylase	NA	NA	NA	NA
WP_002287130.1\|2116013_2117693_-	ribonuclease J	NA	NA	NA	NA
WP_059355908.1\|2118240_2119743_+	ABC transporter permease	NA	NA	NA	NA
WP_002287128.1\|2119755_2120418_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-21	34.7
WP_002287127.1\|2120518_2120722_-	CsbD family protein	NA	NA	NA	NA
WP_002287525.1\|2120992_2122141_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
WP_002287522.1\|2122157_2122562_-\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.3e-52	73.8
WP_002287126.1\|2122723_2123908_-	beta-aspartyl-peptidase	NA	NA	NA	NA
WP_002294022.1\|2124064_2125804_-	putative basic amino acid antiporter YfcC	NA	NA	NA	NA
WP_002287124.1\|2126576_2127191_-	SIS domain-containing protein	NA	NA	NA	NA
WP_002294021.1\|2127796_2128174_-	hypothetical protein	NA	NA	NA	NA
WP_002287122.1\|2128473_2129355_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	1.3e-73	50.3
WP_002287121.1\|2129397_2130417_-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_002287119.1\|2131049_2132054_-	SIS domain-containing protein	NA	NA	NA	NA
WP_002287118.1\|2132066_2133116_-	SIS domain-containing protein	NA	NA	NA	NA
WP_002287116.1\|2133132_2133954_-	PTS system mannose/fructose/sorbose family transporter subunit IID	NA	NA	NA	NA
WP_002287115.1\|2133940_2134720_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_002287114.1\|2134736_2135207_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_002287112.1\|2135218_2135638_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA
WP_002302892.1\|2135718_2138487_-	sigma-54-dependent transcriptional regulator	NA	NA	NA	NA
WP_002294014.1\|2138686_2138911_+	hypothetical protein	NA	NA	NA	NA
WP_002294013.1\|2139689_2141405_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-50	28.3
WP_002289511.1\|2141407_2143171_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-44	30.2
WP_002289509.1\|2143210_2143747_-	folate family ECF transporter S component	NA	NA	NA	NA
WP_002289508.1\|2144069_2144492_-	methylglyoxal synthase	NA	NA	NA	NA
WP_002289507.1\|2144700_2145810_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	1.2e-20	33.0
WP_002294011.1\|2145933_2146563_-	hypothetical protein	NA	NA	NA	NA
WP_002294004.1\|2147013_2147898_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_002305490.1\|2147890_2148460_-	ribonuclease M5	NA	NA	NA	NA
WP_002294001.1\|2148452_2149229_-	TatD family hydrolase	NA	NA	NA	NA
WP_002294000.1\|2149383_2150706_-	amino acid permease	NA	NA	NA	NA
WP_002293998.1\|2150880_2151468_+	hypothetical protein	NA	NA	NA	NA
WP_002289325.1\|2151946_2153956_-\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.4e-96	38.3
WP_002289337.1\|2154223_2154502_+	hypothetical protein	NA	NA	NA	NA
WP_002289327.1\|2154598_2155420_+	NUDIX hydrolase	G3MA14	Bacillus_virus	2.7e-25	32.8
WP_138821037.1\|2155704_2156715_-	helix-turn-helix domain-containing protein	A0A288TXV8	Enterococcus_phage	2.8e-56	40.8
WP_002289330.1\|2156726_2157680_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.0e-20	33.2
WP_002289332.1\|2157669_2158740_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-20	31.0
WP_002289334.1\|2158745_2159789_-	ABC transporter permease	NA	NA	NA	NA
WP_002293573.1\|2159789_2160731_-	ABC transporter permease	NA	NA	NA	NA
WP_002293992.1\|2160814_2161162_+	DUF3899 domain-containing protein	NA	NA	NA	NA
WP_002289796.1\|2161231_2162893_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002289795.1\|2163438_2163987_-	aminoglycoside N-acetyltransferase AAC(6')-Ii	NA	NA	NA	NA
WP_002303623.1\|2164539_2165643_+	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_002293986.1\|2165835_2166903_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA
WP_002289244.1\|2167132_2169580_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	8.1e-86	50.7
WP_002289243.1\|2169768_2171205_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.4e-48	29.4
WP_002289242.1\|2171523_2172339_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002289241.1\|2172356_2172992_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-27	36.4
WP_002303625.1\|2173010_2173652_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_002289239.1\|2174131_2174617_+\|tRNA	prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002289238.1\|2174888_2177054_-	collagen-binding MSCRAMM adhesin Acm	NA	NA	NA	NA
WP_002287525.1\|2177566_2178715_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
WP_002287522.1\|2178731_2179136_-\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.3e-52	73.8
WP_002289237.1\|2179439_2179739_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_002289236.1\|2180089_2180722_+	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_002303626.1\|2180844_2181483_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_11

2404877 : 2489951

Bacillus_phage(29.41%)

transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297218.1\|2404877_2406173_+\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002294493.1\|2406327_2407011_+	rhamnogalacturonan acetylesterase	NA	NA	NA	NA
WP_002285996.1\|2407012_2407849_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_010729265.1\|2407859_2409614_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.4e-39	26.4
WP_002285994.1\|2409889_2410231_-	YlbF family regulator	A0A1X9I5Y8	Streptococcus_phage	1.3e-10	34.9
WP_002294492.1\|2410298_2412470_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_002285989.1\|2412680_2413538_+	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_002285988.1\|2413608_2414466_-	ROK family protein	NA	NA	NA	NA
WP_002285985.1\|2414450_2417153_-	alpha-mannosidase	NA	NA	NA	NA
WP_002294491.1\|2417165_2418455_-	glycoside hydrolase family 125 protein	NA	NA	NA	NA
WP_002302559.1\|2418604_2419651_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002302560.1\|2419652_2421806_+	alpha-1,2-mannosidase	NA	NA	NA	NA
WP_002297218.1\|2422071_2423367_-\|transposase	ISL3-like element ISEfa11 family transposase	A0A2D1GQC1	Lysinibacillus_phage	2.1e-08	20.9
WP_002304851.1\|2423800_2425252_-	response regulator transcription factor	NA	NA	NA	NA
WP_002285976.1\|2425248_2426973_-	sensor histidine kinase	NA	NA	NA	NA
WP_002285975.1\|2426965_2427580_-	DUF624 domain-containing protein	NA	NA	NA	NA
WP_002285974.1\|2427924_2429382_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002285972.1\|2429422_2430343_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_002285971.1\|2430354_2431302_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_002285969.1\|2431780_2432500_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002285966.1\|2432548_2434195_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_000202380.1\|2434442_2435762_+\|transposase	IS1380-like element IS1678 family transposase	A0A1X9I6F6	Streptococcus_phage	4.8e-210	82.7
WP_002285964.1\|2436057_2436648_+	transporter	NA	NA	NA	NA
WP_002294486.1\|2436739_2438245_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase	NA	NA	NA	NA
WP_002285961.1\|2438328_2439681_-	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA
WP_002285960.1\|2439680_2440199_-	hypothetical protein	NA	NA	NA	NA
WP_002285954.1\|2440214_2440541_-	PTS cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_002285949.1\|2440553_2442533_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_002285948.1\|2442553_2442868_-	PTS cellobiose transporter subunit IIB	NA	NA	NA	NA
WP_002285944.1\|2443035_2443329_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_002321621.1\|2443406_2444519_-	FUSC family protein	NA	NA	NA	NA
WP_002297280.1\|2444671_2444896_+	hypothetical protein	NA	NA	NA	NA
WP_002285932.1\|2444905_2445085_+\|transposase	transposase	NA	NA	NA	NA
WP_104674935.1\|2445278_2445449_+	hypothetical protein	NA	NA	NA	NA
WP_099704171.1\|2445872_2446613_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_002285922.1\|2452016_2452778_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_162166410.1\|2452877_2454599_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-37	28.0
WP_002285918.1\|2454613_2456398_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.7e-46	28.2
WP_002285917.1\|2456778_2458332_-	glycosyl hydrolase	NA	NA	NA	NA
WP_002285916.1\|2458679_2461094_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	72.8
WP_002301403.1\|2461520_2463539_-	LysM peptidoglycan-binding domain-containing protein	Q9ZXE4	Bacillus_phage	5.8e-13	39.6
WP_002285911.1\|2463908_2464565_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_002285909.1\|2464564_2465521_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-43	57.4
WP_002285906.1\|2465520_2466087_+	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	2.2e-34	42.8
WP_002303072.1\|2466291_2468061_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.7e-54	29.5
WP_002285883.1\|2468063_2469776_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	1.2e-14	25.4
WP_002303070.1\|2469890_2470559_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_002295567.1\|2470625_2471414_-	esterase family protein	NA	NA	NA	NA
WP_002295566.1\|2471496_2472969_-	MFS transporter	NA	NA	NA	NA
WP_002289731.1\|2473098_2474292_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.3e-150	72.0
WP_002297185.1\|2474575_2475871_+\|transposase	ISL3-like element ISEfa5 family transposase	A0A2D1GQC1	Lysinibacillus_phage	3.8e-10	21.4
WP_002296055.1\|2484123_2485620_-\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	8.7e-91	40.9
WP_002290055.1\|2485730_2486735_-\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_002296053.1\|2486735_2487623_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_002287418.1\|2487839_2489951_-\|protease	ATP-dependent zinc metalloprotease FtsH	C7U047	Ostreococcus_tauri_virus	9.1e-110	50.3

DBSCAN-SWA_12

2606204 : 2623100

Streptococcus_phage(92.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002297366.1\|2606204_2606519_+	YdcP family protein	A0A1S5SF38	Streptococcus_phage	1.0e-25	53.4
WP_002297365.1\|2606531_2606906_+	YdcP family protein	A0A1S5SF96	Streptococcus_phage	2.4e-34	66.1
WP_002297364.1\|2606915_2607251_+	hypothetical protein	NA	NA	NA	NA
WP_002321809.1\|2607333_2608674_+	DUF87 domain-containing protein	A0A1S5SFB5	Streptococcus_phage	2.4e-164	65.4
WP_002297358.1\|2608751_2609426_+	AAA family ATPase	NA	NA	NA	NA
WP_002321810.1\|2609658_2610093_+	DNA (cytosine-5-)-methyltransferase	A0A1S5SDW2	Streptococcus_phage	6.5e-63	77.1
WP_002297356.1\|2610093_2610801_+	DNA methylase	A0A1S5SEK0	Streptococcus_phage	5.8e-53	50.4
WP_002297354.1\|2610790_2611081_+	hypothetical protein	NA	NA	NA	NA
WP_002297353.1\|2611339_2612524_+	XRE family transcriptional regulator	A0A1S5SEX3	Streptococcus_phage	2.9e-142	61.6
WP_002297352.1\|2612538_2612658_+	DUF3789 domain-containing protein	NA	NA	NA	NA
WP_002286940.1\|2613403_2615314_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	7.1e-37	29.8
WP_033658092.1\|2615417_2615642_+	hypothetical protein	A0A1S5SEY0	Streptococcus_phage	1.2e-23	83.8
WP_002297350.1\|2615654_2616158_+	antirestriction protein ArdA	A0A1S5SF25	Streptococcus_phage	9.2e-53	59.9
WP_002297349.1\|2616217_2616607_+	conjugal transfer protein	A0A1S5SEX7	Streptococcus_phage	3.9e-43	68.3
WP_002297348.1\|2616593_2619041_+	ATP-binding protein	A0A1S5SF64	Streptococcus_phage	0.0e+00	76.0
WP_002297347.1\|2619045_2621169_+	hypothetical protein	A0A1S5SF30	Streptococcus_phage	1.2e-181	59.7
WP_002297346.1\|2621165_2622170_+	peptidase P60	A0A1S5SEZ8	Streptococcus_phage	5.6e-118	63.5
WP_002297345.1\|2622188_2623100_+	conjugal transfer protein	A0A1S5SF22	Streptococcus_phage	2.2e-65	44.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP039730

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP039730_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP039730_1

2452-2610

TypeV-U3

Consensus_repeat	Method
AATTTGAGAAACATGCTGTTTTATATGGTTCTAAAAC	PILER-CR

2 spacers

c2c10_CAS-V-U3

The CRISPR arrays of NZ_CP039730_1

>merge|NZ_CP039730|1|2452-2610|PILER-CR
CATGTTGTTTTATATGGTTCTAAAGCAGGAACGCCATCAATTAATTTAAAGTACTCATTTGAGAAACATGCTGTTTTATATGGTTCTAAAACAAACTGCTAGCAATTTCCCTTATCCTAAAAATTTGAGAAACATGCTGTTTTATATGGTTCTAAAACC

>NZ_CP039730|1|1|2452-2610|PILER-CR
CATGTTGTTTTATATGGTTCTAAAGCAGGAACGCCATCAATTA	ATTTAAAGTACTCATTTGAGAAACATG
CTGTTTTATATGGTTCTAAAACAAACTGCTAGCAATTTCCCTT	ATCCTAAAAATTTGAGAAACATGCTGTTT
TATATGGTTCTAAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP039730.1\|WP_010730972.1\|9082_9877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002347528.1\|205_553_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002350689.1\|2719_3946_-\|hypothetical-protein	c2c10_CAS-V-U3	-	unknown
NZ_CP039730.1\|WP_002347492.1\|4364_4736_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_010730971.1\|7935_9054_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002347494.1\|6638_7328_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002321530.1\|7582_7903_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002347491.1\|4079_4280_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_002347493.1\|4786_6415_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|369600
NZ_CP039730.1\|WP_002350561.1\|6434_6638_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP039730.1\|WP_010730973.1\|9886_10762_-\|hypothetical-protein	unknown	unknown	unknown

>NZ_CP039730.1|WP_002347528.1|205_553_-|hypothetical-protein
MIEYNDRGRLKWSGFYLSDHTERINADNVQRANHNLAKEQMTTEEIAKILRTAVIKNRPVCIQKEERNAEGYYPDDVVGKIIGYDELGVFVEEEKVHYDEIRNVSFSELLKWSQI
>NZ_CP039730.1|WP_002350689.1|2719_3946_-|hypothetical-protein
MIFYMFININEVLKLTTITMTKKIEVYVDGSQEERDSFFDFFWKNSREYVKALNLVYKQLMFEELIKDAIKEMDQGYAEREESIQNRIEKLAYTDPIDQKKLDKAKAELSKLRNEKNKEAREILTQAIGLKSQTRTRDVAKKLDFDFGDFVDSANMKASKDFGNDFIGIVTGQRTPRIYKNRNKYGLLPFRGRDIKIHKDDKFYIYLPKGFRFKVNLGSKPRKARDVASVLQHIMDGDYKLNQSNLIFDGRKLFFNLTISFEKSYNEMEFKKGNELIVNFADLCSGECLINDKSVMSFGDSQYIRNFKSKILAMKSKEQSRGVFSKGGHGRKRKLDQDRWEAIKKRESNFVKTYNNQCSAKIVKTAIRNKAQIIRIIEPDKAYGEWAYYQLKEQLVNKGKRYGIEVRS
>NZ_CP039730.1|WP_002347491.1|4079_4280_-|hypothetical-protein
MLKRIAWDKDNKTDIELKEYKYNYFSRCIDRKLLFKKEGLEFSFDEDEFEKLVMDWRKNLLDTVQF
>NZ_CP039730.1|WP_002347492.1|4364_4736_-|hypothetical-protein
MRELTLSSKELEKKTALLNEIFSADCIIQSLKESSFSKLTDQEKISYMLSLDNLGTKYDESASSDKLLIELVSSLSSFGKMKRFNVILEIFAWLIPSFIWFFYIFIVESELIAKVSLGLLIPI
>NZ_CP039730.1|WP_002347493.1|4786_6415_-|hypothetical-protein
MPEIEGIFSPKIGKKQLDFSSFPSVNRDYNLGDEVQILNIDFKELDFAVAVSNKPKALERVKKIYQENDQNIKNMIKKYRRDNSKVEDVLFNGTAKHDLNVYMALGVALYCNSINQTDILVNIVRNSYQKILKISSETNPYYAMKYLGDNLLNDKKLMHNTEELLSNLAAINFLFKTGSEDYFIDNVLKGAYGTAFYPLYNMKQHKAEQKDNKLEIKKMKELLGIGFVKPNSKVTIASLATTNNDGKIVNGFDDSDIDILSKSYFSLYGDFADLMGIDSYLVNNFEIKGSELNDIVYFVLISLYAIDQNTEYRQIDYLLVFYSLLYQFVLTRLFKNAKEELILNSDYEIAKQIASIRKENKSEVIKLRKELSIASKENGRLESLVKSAKKEEELLKQEIKELKGIRKELEQLRFENKVLKQLQEQEHRQSLNGKTEEPSLSEMIAYLKHKNILLVGGHVNFQNKLTELLPNIKMFDVSENNGKILKNLNTCDAIFLYTDYLNHGLYYRVMSEISNKDKIFYLDNHVNMNLTIKRIYDLLSLI
>NZ_CP039730.1|WP_002350561.1|6434_6638_-|hypothetical-protein
MSEGTEKYTIADMVNEVETLLASFFENGHVNDEWRKEEPKRVNAYIARLKRFIDKYKENSDKFSKDK
>NZ_CP039730.1|WP_002347494.1|6638_7328_-|hypothetical-protein
MRTHYIYLEDKIVDEIPAKSREQARKLFIEKYKEINGDSEVPKVVVTVRKRQTKKRSTFHVSPDIYNLIERHRSEDNISISQYIATVIDELISGKYDYAFDFEGEKDYKSVAVFQSDFEKLKNYAGRRNVNFARLLEEFYSEELGVGNEYKRETYAKLSHKLSQALKEVTEVKAELDAKLEEVKKYQTERKNNMKNQVEFDEQKEFEKARKRYNKIMNELSYEHLTVHE
>NZ_CP039730.1|WP_002321530.1|7582_7903_-|hypothetical-protein
MKKKIVEGNVGVIILKDSTDYAKSMALKDEKVARMDKDLVEFLMDDTERLKGDQFLSLMKDKGLNTYGLFDYKKLAIEWVKEGEIFFIEEWEGTENLVLHQYLLKA
>NZ_CP039730.1|WP_010730971.1|7935_9054_-|hypothetical-protein
MGNNSIYTPEMQNKIKRLVGLGWMTRGKLDSFSTIKYLLMDIYRQNKQTGIHFLGYDKPEDAPFFVPSSAYRASTSGSMYNLDLFEEGAKMIEYDFNEAYSRIMRNYPLPSNTYLKAKYNTDQAILRAINRPKVRPYENLKTYMFFLVNFEGTAKEGTYANPKSQSMFADYGENPKTANEPIWLSEIELTLILDYYDIKEMEVLDSHTFLTKKGLLKEYFERIEPLKTDPDTLKLYKNLRTKVFGAIGQKSLREGETSTFDKYSMYNRAYSSMVAGVFRDRMVRYEQKYVHSAYGLLKIRTDGLYFRSEVPEFEELYKLGVVKKKVHTISKEEVEKALEFKNKGFENKGSFGKSKDEVKGVVIDDDFEFDFD
>NZ_CP039730.1|WP_010730972.1|9082_9877_-|hypothetical-protein
MVAKKNTLKEASEKYQDMKRRGLIPKDKKGIWREFVKEVSSDRSGGDFVGRYTAKGYSRRLRITVEYGTNESATELKQRYLDTRREASKKYDDFKSRGLIPKKKKGIWREFFKEEDSNRNKGDFIGRYTAKGYTKNLGIKVEYGTGESSWELRNRYLNTLLEKYKAELLELFDVNDFIEMAEKYGHEEGFMINDIMVIDNFTDLLALAKKARDLRETQMYLFRNKNGRNRRTESSEIEDYYDAFTHDLGAFVDEISGVMNKYRV
>NZ_CP039730.1|WP_010730973.1|9886_10762_-|hypothetical-protein
MTTNKRWSELVQNTVKKVMPDGYHFNYIQCSQTTESIYFSILNENRLYYFRVSSHHRKKREDNVTTFLSGKYNGFKELSEAIGEYLKSNRFVRISDKHILILLLYLNNSFKLFWRDDTFYYIENGMDIYSGINGILKHYIKALLRYGVLYQEDLSNQIKISNSGKSLLAKYKKLLSPIYKGIDMEAVNSETLFNLVVDEKFANEFFKSKKIERLNNLFPENAIKAYVDNNKSRLYNWFIPKRLRGKIKIGDQVKVINLNHTKIVTVTELYIAEKEDITKMKPVIKILDNKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041263	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2	11554-11580	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	11093-11119	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	11243-11269	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135490	Enterococcus faecium isolate E8414 plasmid 3	8059-8085	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR134109	Enterococcus faecium isolate E6043 plasmid 5	6270-6296	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	MN831413	Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence	16746-16772	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP039730	Enterococcus faecium strain ZY2 plasmid pZY2	2476-2502	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040238	Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence	20567-20593	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_MG640601	Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence	8436-8462	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LT598665	Enterococcus faecium isolate Ef_aus00233 plasmid 3	2727-2753	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	136823-136849	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027511	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence	85401-85427	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	123909-123935	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041272	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2	78222-78248	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP025427	Enterococcus faecium strain SC4 plasmid p2, complete sequence	136753-136781	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP027511	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence	85331-85359	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	123773-123801	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	123839-123867	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP041272	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2	78152-78180	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP041263	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2	11622-11650	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135245	Enterococcus faecium isolate E6988 plasmid 3	11161-11189	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135256	Enterococcus faecium isolate E7098 plasmid 3	11311-11339	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135490	Enterococcus faecium isolate E8414 plasmid 3	8127-8155	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR134109	Enterococcus faecium isolate E6043 plasmid 5	6338-6366	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP039730	Enterococcus faecium strain ZY2 plasmid pZY2	2544-2572	0	1.0
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_MG640601	Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence	8504-8532	0	1.0
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP011829	Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence	55975-56001	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP025687	Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence	98743-98769	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	52170-52196	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP032307	Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence	60987-61013	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP042833	Enterococcus faecium strain FA3 plasmid unnamed1	43270-43296	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP046076	Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence	6156-6182	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135199	Enterococcus faecium isolate E6055 plasmid 3	4729-4755	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135180	Enterococcus faecium isolate E0595 plasmid 2	4824-4850	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135374	Enterococcus faecium isolate E8172 plasmid 3	4729-4755	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR132068	Enterococcus faecium isolate E0139 plasmid 2	4824-4850	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040704	Enterococcus faecium strain HOU503 plasmid p1, complete sequence	71713-71739	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035137	Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence	183283-183309	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP037956	Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_1, complete sequence	39536-39562	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035221	Enterococcus faecium strain SRCM103470 plasmid unnamed1	90524-90550	1	0.963
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	LR135186	Enterococcus faecium isolate E4413 genome assembly, plasmid: 2	4824-4850	1	0.963
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP020486	Enterococcus faecium strain CFSAN059070 plasmid unnamed2, complete sequence	1021-1049	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP027519	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed2, complete sequence	18674-18702	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135342	Enterococcus faecium isolate E7356 plasmid 4	28090-28118	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135295	Enterococcus faecium isolate E7237 plasmid 3	4029-4057	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NC_010880	Enterococcus faecium plasmid pEF1, complete sequence	14007-14035	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135346	Enterococcus faecium isolate E8202 plasmid 3	16824-16852	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135353	Enterococcus faecium isolate E8014 plasmid 3	32701-32729	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR134110	Enterococcus faecium isolate E6043 plasmid 6	8201-8229	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP018067	Enterococcus faecium strain E1 plasmid pE1_29, complete sequence	7322-7350	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135300	Enterococcus faecium isolate E7429 plasmid 4	10919-10947	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135491	Enterococcus faecium isolate E8414 plasmid 4	27218-27246	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135366	Enterococcus faecium isolate E8195 plasmid 3	20506-20534	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135403	Enterococcus faecium isolate E8377 plasmid 3	8916-8944	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135396	Enterococcus faecium isolate E8290 plasmid 3	54027-54055	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_LR135387	Enterococcus faecium isolate E7933 plasmid 4	27113-27141	1	0.966
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP044276	Enterococcus faecium strain V2937 plasmid pHVH-V2937-2, complete sequence	9617-9645	1	0.966
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP025426	Enterococcus faecium strain SC4 plasmid p1, complete sequence	215525-215551	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	46724-46750	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027401	Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence	104416-104442	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP012385	Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence	90076-90102	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	287699-287725	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	352514-352540	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	115577-115603	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018070	Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence	12155-12181	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018070	Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence	75627-75653	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135246	Enterococcus faecium isolate E6988 plasmid 4	6849-6875	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135280	Enterococcus faecium isolate E6975 plasmid 3	47723-47749	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135237	Enterococcus faecium isolate E7067 plasmid 3	5681-5707	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135261	Enterococcus faecium isolate E4457 plasmid 4	37694-37720	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041258	Enterococcus faecium strain 515 plasmid p27, complete sequence	75809-75835	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135477	Enterococcus faecium isolate E8423 plasmid 3	6957-6983	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135222	Enterococcus faecium isolate E7040 plasmid 4	48702-48728	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP050649	Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE	86386-86412	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP050651	Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT	97410-97436	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR134108	Enterococcus faecium isolate E6043 plasmid 4	42200-42226	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP015517	Enterococcus hirae strain R17 plasmid, complete sequence	8505-8531	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LN999988	Enterococcus faecium isolate EFE11651 plasmid II, complete sequence	92660-92686	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP033042	Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence	47621-47647	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NC_017963	Enterococcus faecium DO plasmid 3, complete sequence	29110-29136	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP042840	Enterococcus sp. DA9 plasmid unnamed4	35528-35554	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP019974	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-4 sequence	44723-44749	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018129	Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence	11094-11120	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP012463	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p3, complete sequence	43129-43155	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LT598664	Enterococcus faecium isolate Ef_aus00233 plasmid 2	164276-164302	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP011283	Enterococcus faecium strain E39 plasmid p2, complete sequence	6439-6465	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP015123	Enterococcus faecium strain E39 plasmid p3, complete sequence	6759-6785	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_KP342511	Enterococcus faecium isolate N12-493 plasmid pEfm12493, complete sequence	20787-20813	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	LT603680	Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 3	4729-4755	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	15135-15161	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040369	Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	CP003352	Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP020485	Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence	102250-102276	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	4841-4867	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041264	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R3, complete sequence	8498-8524	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP012367	Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence	8381-8407	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027499	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed2, complete sequence	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027508	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed2, complete sequence	4748-4774	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027502	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence	4841-4867	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027503	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence	4749-4775	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135298	Enterococcus faecium isolate E7429 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135289	Enterococcus faecium isolate E7199 plasmid 3	12899-12925	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135340	Enterococcus faecium isolate E7356 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	4373-4399	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	157897-157923	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027513	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence	4452-4478	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP027514	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence	4749-4775	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP013010	Enterococcus faecium strain UW7606x64/3 TC1 plasmid pWCF-TC1, complete sequence	62597-62623	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135783	Enterococcus faecium isolate E4239 plasmid 2	6264-6290	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135294	Enterococcus faecium isolate E7237 plasmid 2	4452-4478	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135257	Enterococcus faecium isolate E7098 plasmid 4	8497-8523	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135238	Enterococcus faecium isolate E7067 plasmid 4	4730-4756	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135198	Enterococcus faecium isolate E6055 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135259	Enterococcus faecium isolate E4457 plasmid 2	7119-7145	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041254	Enterococcus faecium strain 515 plasmid p169, complete sequence	59578-59604	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NC_021995	Enterococcus faecium Aus0085 plasmid p2, complete sequence	6710-6736	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP017799	Enterococcus faecium strain E243 plasmid unnamed2, complete sequence	6759-6785	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135429	Enterococcus faecium isolate E8927 plasmid 2	4373-4399	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135436	Enterococcus faecium isolate E8691 plasmid 2	5439-5465	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135483	Enterococcus faecium isolate E4456 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135204	Enterococcus faecium isolate E7171 plasmid 2	4452-4478	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135207	Enterococcus faecium isolate E7171 plasmid 5	4729-4755	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135175	Enterococcus faecium isolate E4402 plasmid 2	5497-5523	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135228	Enterococcus faecium isolate E7025 plasmid 3	4729-4755	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135489	Enterococcus faecium isolate E8414 plasmid 2	8779-8805	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135365	Enterococcus faecium isolate E8195 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135221	Enterococcus faecium isolate E7040 plasmid 3	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135415	Enterococcus faecium isolate E8328 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135395	Enterococcus faecium isolate E8290 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135345	Enterococcus faecium isolate E8202 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135326	Enterococcus faecium isolate E7654 plasmid 3	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135409	Enterococcus faecium isolate E8284 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135352	Enterococcus faecium isolate E8014 plasmid 2	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135385	Enterococcus faecium isolate E7933 plasmid 2	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135386	Enterococcus faecium isolate E7933 plasmid 3	10388-10414	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	4841-4867	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135319	Enterococcus faecium isolate E7663 plasmid 3	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135373	Enterococcus faecium isolate E8172 plasmid 2	6343-6369	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP006031	Enterococcus faecium T110 plasmid pEFT110, complete sequence	6425-6451	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_AP019395	Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence	4373-4399	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP045013	Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence	4373-4399	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040741	Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP014530	Enterococcus faecium strain E745 plasmid pl1, complete sequence	206637-206663	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP014534	Enterococcus faecium strain E745 plasmid pl5, complete sequence	23849-23875	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023424	Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023425	Enterococcus faecium strain K60-39 plasmid pTT39_p2, complete sequence	8497-8523	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	10092-10118	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041273	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S3, complete sequence	8497-8523	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040873	Enterococcus faecium strain DB-1 plasmid punnamed1	45026-45052	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040876	Enterococcus faecium strain DB-1 plasmid punnamed2	7876-7902	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP044275	Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence	7712-7738	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP017794	Enterococcus faecium strain E240 plasmid unnamed2, complete sequence	6732-6758	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	6155-6181	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023790	Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023800	Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	6155-6181	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	6155-6181	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR134096	Enterococcus faecium isolate E1334 plasmid 2	5497-5523	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	6156-6182	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135171	Enterococcus faecium isolate E4227 plasmid 2	6264-6290	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135192	Enterococcus faecium isolate E4438 plasmid 2	5439-5465	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135193	Enterococcus faecium isolate E4438 plasmid 3	4729-4755	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	4840-4866	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP019971	Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence	118213-118239	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135309	Enterococcus faecium isolate E7240 plasmid 3	40230-40256	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040237	Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence	4841-4867	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018066	Enterococcus faecium strain E1 plasmid pE1_230, complete sequence	1650-1676	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023809	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023812	Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.5, complete sequence	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP033208	Enterococcus faecium strain RBWH1 plasmid pRBWH1.2, complete sequence	4730-4756	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023805	Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	65573-65599	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	9113-9139	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	15135-15161	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP012432	Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p1, complete sequence	37707-37733	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023795	Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP023781	Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence	29953-29979	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LT598666	Enterococcus faecium isolate Ef_aus00233 plasmid 4	6714-6740	2	0.926
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP040851	Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence	355-381	3	0.889
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_LR135205	Enterococcus faecium isolate E7171 plasmid 3	30104-30130	3	0.889
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP016164	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence	181277-181303	3	0.889
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NZ_CP016165	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p2, complete sequence	50324-50350	3	0.889
NZ_CP039730_1	1.1\|2495\|27\|NZ_CP039730\|PILER-CR	2495-2521	27	NC_022883	Enterococcus mundtii QU 25 plasmid pQY082, complete sequence	33166-33192	4	0.852
NZ_CP039730_1	1.2\|2565\|29\|NZ_CP039730\|PILER-CR	2565-2593	29	NZ_CP026693	Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP1, complete sequence	109882-109910	7	0.759

1. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041263 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

2. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

3. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

4. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135490 (Enterococcus faecium isolate E8414 plasmid 3) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

5. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR134109 (Enterococcus faecium isolate E6043 plasmid 5) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

6. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to MN831413 (Enterococcus faecium strain M17/0314 plasmid pM17/0314, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

7. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP039730 (Enterococcus faecium strain ZY2 plasmid pZY2) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

8. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040238 (Enterococcus faecium strain VB3025 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

9. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_MG640601 (Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

10. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LT598665 (Enterococcus faecium isolate Ef_aus00233 plasmid 3) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

11. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

12. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027511 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

13. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

14. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041272 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2) position: , mismatch: 0, identity: 1.0

gcaggaacgccatcaattaatttaaag	CRISPR spacer
gcaggaacgccatcaattaatttaaag	Protospacer
***************************

15. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP025427 (Enterococcus faecium strain SC4 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

16. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP027511 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

17. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

18. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

19. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP041272 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S2) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

20. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP041263 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R2) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

21. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135245 (Enterococcus faecium isolate E6988 plasmid 3) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

22. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135256 (Enterococcus faecium isolate E7098 plasmid 3) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

23. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135490 (Enterococcus faecium isolate E8414 plasmid 3) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

24. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR134109 (Enterococcus faecium isolate E6043 plasmid 5) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

25. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP039730 (Enterococcus faecium strain ZY2 plasmid pZY2) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

26. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_MG640601 (Enterococcus faecium strain SRR6 plasmid pEMSRR6, complete sequence) position: , mismatch: 0, identity: 1.0

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactgctagcaatttcccttatcctaaa	Protospacer
*****************************

27. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP011829 (Enterococcus faecium strain UW8175 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

28. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP025687 (Enterococcus faecium strain CBA7134 plasmid pCBA710401, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

29. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040877 (Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

30. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP032307 (Enterococcus faecium strain HY07 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

31. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP042833 (Enterococcus faecium strain FA3 plasmid unnamed1) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

32. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP046076 (Enterococcus faecium strain VRE plasmid p5_03A17012, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

33. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135199 (Enterococcus faecium isolate E6055 plasmid 3) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

34. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135180 (Enterococcus faecium isolate E0595 plasmid 2) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

35. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135374 (Enterococcus faecium isolate E8172 plasmid 3) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

36. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR132068 (Enterococcus faecium isolate E0139 plasmid 2) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

37. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040704 (Enterococcus faecium strain HOU503 plasmid p1, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

38. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035137 (Enterococcus faecium strain SRCM103341 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

39. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP037956 (Enterococcus hirae strain CQP3-9 plasmid pCQP3-9_1, complete sequence) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

40. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035221 (Enterococcus faecium strain SRCM103470 plasmid unnamed1) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

41. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to LR135186 (Enterococcus faecium isolate E4413 genome assembly, plasmid: 2) position: , mismatch: 1, identity: 0.963

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcaattaatttaaag	Protospacer
 **************************

42. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP020486 (Enterococcus faecium strain CFSAN059070 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

43. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP027519 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

44. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135342 (Enterococcus faecium isolate E7356 plasmid 4) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

45. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135295 (Enterococcus faecium isolate E7237 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

46. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NC_010880 (Enterococcus faecium plasmid pEF1, complete sequence) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

47. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135346 (Enterococcus faecium isolate E8202 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

48. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135353 (Enterococcus faecium isolate E8014 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

49. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR134110 (Enterococcus faecium isolate E6043 plasmid 6) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

50. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP018067 (Enterococcus faecium strain E1 plasmid pE1_29, complete sequence) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

51. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135300 (Enterococcus faecium isolate E7429 plasmid 4) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

52. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135491 (Enterococcus faecium isolate E8414 plasmid 4) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

53. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135366 (Enterococcus faecium isolate E8195 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

54. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135403 (Enterococcus faecium isolate E8377 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

55. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135396 (Enterococcus faecium isolate E8290 plasmid 3) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

56. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_LR135387 (Enterococcus faecium isolate E7933 plasmid 4) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

57. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP044276 (Enterococcus faecium strain V2937 plasmid pHVH-V2937-2, complete sequence) position: , mismatch: 1, identity: 0.966

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactactagcaatttcccttatcctaaa	Protospacer
*****.***********************

58. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP025426 (Enterococcus faecium strain SC4 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

59. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

60. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027401 (Enterococcus faecium strain FDAARGOS_323 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

61. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP012385 (Enterococcus durans strain KLDS 6.0930 plasmid unnamed 1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

62. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

63. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

64. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

65. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018070 (Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

66. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018070 (Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

67. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135246 (Enterococcus faecium isolate E6988 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

68. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135280 (Enterococcus faecium isolate E6975 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

69. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135237 (Enterococcus faecium isolate E7067 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

70. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135261 (Enterococcus faecium isolate E4457 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

71. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041258 (Enterococcus faecium strain 515 plasmid p27, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

72. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135477 (Enterococcus faecium isolate E8423 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

73. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135222 (Enterococcus faecium isolate E7040 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

74. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP050649 (Enterococcus faecium strain BIOPOP-3 ALE plasmid pBIOPOP-3_ALE) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

75. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP050651 (Enterococcus faecium strain BIOPOP-3 WT plasmid pBIOPOP-3_WT) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

76. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR134108 (Enterococcus faecium isolate E6043 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

77. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP015517 (Enterococcus hirae strain R17 plasmid, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

78. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LN999988 (Enterococcus faecium isolate EFE11651 plasmid II, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

79. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP033042 (Enterococcus faecium strain Enterococcus faecium JE1 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

80. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NC_017963 (Enterococcus faecium DO plasmid 3, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

81. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP042840 (Enterococcus sp. DA9 plasmid unnamed4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

82. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP019974 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-4 sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

83. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018129 (Enterococcus faecium strain A_020709_82 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

84. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP012463 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p3, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

85. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LT598664 (Enterococcus faecium isolate Ef_aus00233 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

86. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP011283 (Enterococcus faecium strain E39 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

87. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP015123 (Enterococcus faecium strain E39 plasmid p3, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

88. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_KP342511 (Enterococcus faecium isolate N12-493 plasmid pEfm12493, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

89. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to LT603680 (Enterococcus faecium isolate Ef_DMG1500501 genome assembly, plasmid: 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

90. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

91. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040369 (Enterococcus faecium strain VB3240 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

92. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to CP003352 (Enterococcus faecium Aus0004 plasmid AUS0004_p1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

93. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP020485 (Enterococcus faecium strain CFSAN059070 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

94. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

95. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041264 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R3, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

96. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP012367 (Enterococcus durans strain KLDS 6.0933 plasmid unnamed 1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

97. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

98. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027499 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

99. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027508 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

100. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

101. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027503 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

102. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135298 (Enterococcus faecium isolate E7429 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

103. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135289 (Enterococcus faecium isolate E7199 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

104. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135340 (Enterococcus faecium isolate E7356 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

105. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

106. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

107. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027513 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

108. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP027514 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

109. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP013010 (Enterococcus faecium strain UW7606x64/3 TC1 plasmid pWCF-TC1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

110. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135783 (Enterococcus faecium isolate E4239 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

111. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135294 (Enterococcus faecium isolate E7237 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

112. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135257 (Enterococcus faecium isolate E7098 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

113. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135238 (Enterococcus faecium isolate E7067 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

114. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135198 (Enterococcus faecium isolate E6055 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

115. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135259 (Enterococcus faecium isolate E4457 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

116. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041254 (Enterococcus faecium strain 515 plasmid p169, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

117. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NC_021995 (Enterococcus faecium Aus0085 plasmid p2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

118. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP017799 (Enterococcus faecium strain E243 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

119. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135429 (Enterococcus faecium isolate E8927 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

120. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135436 (Enterococcus faecium isolate E8691 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

121. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135483 (Enterococcus faecium isolate E4456 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

122. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

123. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135204 (Enterococcus faecium isolate E7171 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

124. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135207 (Enterococcus faecium isolate E7171 plasmid 5) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

125. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135175 (Enterococcus faecium isolate E4402 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

126. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135228 (Enterococcus faecium isolate E7025 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

127. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135489 (Enterococcus faecium isolate E8414 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

128. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135365 (Enterococcus faecium isolate E8195 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

129. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135221 (Enterococcus faecium isolate E7040 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

130. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135415 (Enterococcus faecium isolate E8328 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

131. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135395 (Enterococcus faecium isolate E8290 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

132. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135345 (Enterococcus faecium isolate E8202 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

133. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135326 (Enterococcus faecium isolate E7654 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

134. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

135. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135409 (Enterococcus faecium isolate E8284 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

136. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135352 (Enterococcus faecium isolate E8014 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

137. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135385 (Enterococcus faecium isolate E7933 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

138. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135386 (Enterococcus faecium isolate E7933 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

139. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

140. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135319 (Enterococcus faecium isolate E7663 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

141. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135373 (Enterococcus faecium isolate E8172 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

142. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP006031 (Enterococcus faecium T110 plasmid pEFT110, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

143. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_AP019395 (Enterococcus faecium strain QU 50 plasmid pQL50, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

144. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP045013 (Enterococcus faecium strain LAC7.2 plasmid pI, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

145. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040741 (Enterococcus faecium strain VRE1 plasmid pVRE1-1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

146. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP014530 (Enterococcus faecium strain E745 plasmid pl1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

147. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP014534 (Enterococcus faecium strain E745 plasmid pl5, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

148. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023424 (Enterococcus faecium strain K60-39 plasmid pTT39_p1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

149. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023425 (Enterococcus faecium strain K60-39 plasmid pTT39_p2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

150. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

151. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041273 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S3, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

152. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040873 (Enterococcus faecium strain DB-1 plasmid punnamed1) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

153. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

154. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP044275 (Enterococcus faecium strain V2937 plasmid pHVH-V2937-1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

155. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP017794 (Enterococcus faecium strain E240 plasmid unnamed2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

156. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

157. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023790 (Enterococcus faecium strain Efaecium_ER04462.3A plasmid pER04462.3A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

158. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023800 (Enterococcus faecium strain Efaecium_ER04526.5A plasmid pER04526.5A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

159. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

160. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

161. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR134096 (Enterococcus faecium isolate E1334 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

162. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

163. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135171 (Enterococcus faecium isolate E4227 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

164. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135192 (Enterococcus faecium isolate E4438 plasmid 2) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

165. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135193 (Enterococcus faecium isolate E4438 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

166. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

167. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP019971 (Enterococcus faecium isolate 2014-VREF-114 plasmid p114-1 sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

168. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135309 (Enterococcus faecium isolate E7240 plasmid 3) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

169. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

170. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018066 (Enterococcus faecium strain E1 plasmid pE1_230, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

171. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023809 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

172. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023812 (Enterococcus faecium strain Efaecium_ER04526.3A plasmid pER04562.3A.5, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

173. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP033208 (Enterococcus faecium strain RBWH1 plasmid pRBWH1.2, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

174. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023805 (Enterococcus faecium strain Efaecium_ER04619.3A isolate isolate plasmid pER04619.3A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

175. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

176. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

177. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

178. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP012432 (Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

179. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023795 (Enterococcus faecium strain Efaecium_ER04484.3A plasmid pER04484.3A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

180. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP023781 (Enterococcus faecium strain Efaecium_ER03933.3A isolate isolate plasmid pER93933.3A.1, complete sequence) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

181. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LT598666 (Enterococcus faecium isolate Ef_aus00233 plasmid 4) position: , mismatch: 2, identity: 0.926

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatttaaag	Protospacer
 *************.************

182. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP040851 (Enterococcus faecium strain F17E0263 plasmid p_unnamned2, complete sequence) position: , mismatch: 3, identity: 0.889

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatctaaag	Protospacer
 *************.******.*****

183. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_LR135205 (Enterococcus faecium isolate E7171 plasmid 3) position: , mismatch: 3, identity: 0.889

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacaccattaattaatttaaag	Protospacer
 *******.****.*************

184. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP016164 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p1, complete sequence) position: , mismatch: 3, identity: 0.889

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatctaaag	Protospacer
 *************.******.*****

185. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NZ_CP016165 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p2, complete sequence) position: , mismatch: 3, identity: 0.889

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgattaatctaaag	Protospacer
 *************.******.*****

186. spacer 1.1|2495|27|NZ_CP039730|PILER-CR matches to NC_022883 (Enterococcus mundtii QU 25 plasmid pQY082, complete sequence) position: , mismatch: 4, identity: 0.852

gcaggaacgccatcaattaatttaaag	CRISPR spacer
tcaggaacgccatcgatcaatttaaaa	Protospacer
 *************.**.********.

187. spacer 1.2|2565|29|NZ_CP039730|PILER-CR matches to NZ_CP026693 (Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183 plasmid pNLP1, complete sequence) position: , mismatch: 7, identity: 0.759

aaactgctagcaatttcccttatcctaaa	CRISPR spacer
aaactggtagcaatttcccctatcagtgc	Protospacer
****** ************.****   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18430 : 51417

Streptococcus_phage(33.33%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016922336.1\|18430_19030_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_002350578.1\|19588_20068_-	hypothetical protein	NA	NA	NA	NA
WP_002320853.1\|20086_20716_-	hypothetical protein	NA	NA	NA	NA
WP_002320854.1\|20712_22089_-	cell division protein FtsK	G1FGP1	Mycobacterium_phage	3.8e-48	42.2
WP_002320855.1\|22168_23431_-	hypothetical protein	NA	NA	NA	NA
WP_002320856.1\|23443_23791_-	hypothetical protein	NA	NA	NA	NA
WP_010729859.1\|23810_24680_-	hypothetical protein	NA	NA	NA	NA
WP_002320858.1\|24911_25718_-	hypothetical protein	NA	NA	NA	NA
WP_010730977.1\|25805_26606_-	hypothetical protein	U5PTP5	Bacillus_phage	9.3e-07	36.3
WP_002350582.1\|26944_28054_-	class C sortase	NA	NA	NA	NA
WP_010730978.1\|28043_28901_-	class C sortase	NA	NA	NA	NA
WP_002350584.1\|28975_30811_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA
WP_016922338.1\|30859_33250_-	Cys-Gln thioester bond-forming surface protein	NA	NA	NA	NA
WP_002350491.1\|33519_34767_-	C39 family peptidase	NA	NA	NA	NA
WP_002350493.1\|35158_35575_+	hypothetical protein	NA	NA	NA	NA
WP_010782614.1\|35591_36329_-	hypothetical protein	NA	NA	NA	NA
WP_016922277.1\|36751_37315_-	hypothetical protein	NA	NA	NA	NA
WP_002350496.1\|37301_37829_-	hypothetical protein	NA	NA	NA	NA
WP_002350497.1\|37851_39189_-	CHAP domain-containing protein	Q859L3	Staphylococcus_phage	8.5e-37	54.0
WP_016922278.1\|39308_39788_+	hypothetical protein	NA	NA	NA	NA
WP_002287525.1\|39944_41093_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
WP_002287522.1\|41109_41514_-\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.3e-52	73.8
WP_044382017.1\|41794_42028_-	hypothetical protein	NA	NA	NA	NA
WP_002347440.1\|42030_42348_-	hypothetical protein	NA	NA	NA	NA
WP_013646119.1\|42883_43564_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	5.8e-127	99.1
WP_162166413.1\|43597_44197_-	D-Ala-D-Ala dipeptidase VanX	NA	NA	NA	NA
WP_063856712.1\|44202_45234_-	D-alanine--(R)-lactate ligase VanM	NA	NA	NA	NA
WP_069286758.1\|45226_46195_-	D-lactate dehydrogenase VanH	M1H9J0	Paramecium_bursaria_Chlorella_virus	1.6e-45	34.2
WP_107309513.1\|46332_47196_-	VanY-A/VanY-F/VanY-M family D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_063856748.1\|47305_48418_-	VanM-type vancomycin resistance histidine kinase VanS	A0A1B0VMK3	Pseudomonas_phage	7.6e-15	28.7
WP_013646119.1\|48800_49481_+\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	5.8e-127	99.1
WP_162166412.1\|49514_49682_-	hypothetical protein	NA	NA	NA	NA
WP_002350500.1\|49734_50064_-	hypothetical protein	NA	NA	NA	NA
WP_002350501.1\|50191_50431_-	hypothetical protein	NA	NA	NA	NA
WP_002295743.1\|50508_51417_-\|transposase	IS982-like element ISEfm1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

86208 : 92669

Streptococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_079158048.1\|86208_86613_+\|transposase	IS200/IS605-like element ISEfa4 family transposase	A0A286QN76	Streptococcus_phage	1.6e-52	73.1
WP_002287525.1\|86629_87778_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A288TXV8	Enterococcus_phage	1.2e-204	93.4
WP_025478686.1\|88186_88582_-	hypothetical protein	NA	NA	NA	NA
WP_002350538.1\|88582_88960_-	hypothetical protein	NA	NA	NA	NA
WP_002320784.1\|88949_89345_-	antitoxin HicB	A0A0C5AN56	Paenibacillus_phage	4.1e-16	39.7
WP_002320785.1\|89411_89597_-	type II toxin-antitoxin system HicA family toxin	A0A0A7RWW9	Clostridium_phage	7.6e-05	40.4
WP_002347534.1\|89678_89933_-	hypothetical protein	NA	NA	NA	NA
WP_002347535.1\|89954_90191_-	hypothetical protein	NA	NA	NA	NA
WP_002347536.1\|90206_90491_-	hypothetical protein	NA	NA	NA	NA
WP_002347537.1\|90593_90776_-	hypothetical protein	NA	NA	NA	NA
WP_001015311.1\|91008_91689_-\|transposase	IS6-like element IS1216 family transposase	A0A1X9I6C6	Streptococcus_phage	1.5e-127	99.6
WP_162166415.1\|91716_92292_-	hypothetical protein	NA	NA	NA	NA
WP_010729835.1\|92402_92669_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5S8E8	Streptococcus_phage	8.6e-18	48.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP039729

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP039730

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection